BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014217
(428 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255559360|ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
gi|223540085|gb|EEF41662.1| RNA binding protein, putative [Ricinus communis]
Length = 436
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/436 (85%), Positives = 396/436 (90%), Gaps = 8/436 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE KKEKKSSEE VKLFVGQVPKHMTE QLLAMFKEFALVDEVNIIKDKTTRASRGCCF
Sbjct: 1 MAEDKKEKKSSEESVKLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS
Sbjct: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW
Sbjct: 121 ELFSTYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKERQARRAQK QSQA+NLPNADSQHPSLFGALPMGY P YNGYGYQA G+YGLM Y
Sbjct: 181 ADTEKERQARRAQKVQSQASNLPNADSQHPSLFGALPMGYVPQYNGYGYQAPGTYGLMPY 240
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMR-GASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ 299
RLPP+Q+QP FH IIPPVNQGNA+R G PDL +MGPRNYA+PP+ +VGS YPAVPG+Q
Sbjct: 241 RLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALPPASYVGSAYPAVPGIQ 300
Query: 300 YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT-------GPPGANLFIYHIPQ 352
YPM YPGGM+ RPL++SPG+VSP V +SN +TSS + GPPG+NLFIYHIPQ
Sbjct: 301 YPMAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPPGSNLFIYHIPQ 360
Query: 353 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 412
EFGDQEL +AFQ +G+VLSAKVFVDKATGVSKCFGFVSY+SP +AQ AI MMNGCQLGGK
Sbjct: 361 EFGDQELASAFQPYGKVLSAKVFVDKATGVSKCFGFVSYDSPTAAQTAINMMNGCQLGGK 420
Query: 413 KLKVQLKRDNKQNKPY 428
KLKVQLKRDNKQ+KPY
Sbjct: 421 KLKVQLKRDNKQSKPY 436
>gi|225436819|ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
vinifera]
gi|296086641|emb|CBI32276.3| unnamed protein product [Vitis vinifera]
Length = 437
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/437 (81%), Positives = 392/437 (89%), Gaps = 9/437 (2%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE+ K +K+SE+ VKLFVGQVPK+MTEAQLLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEAPKPRKASEDSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSRQEADKAVNACHNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS
Sbjct: 61 VICPSRQEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW
Sbjct: 121 SLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
ADTEKERQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGYGYQA G+YGLMQ
Sbjct: 181 ADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQ 240
Query: 240 YRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ 299
YR+PPMQ+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + ++GS YPA+PGLQ
Sbjct: 241 YRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQ 300
Query: 300 YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT-------GPPGANLFIYHIPQ 352
YPM Y GG++ H+PL+ SPGS PA+ SN T+S G GPPGANLFIYHIPQ
Sbjct: 301 YPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLFIYHIPQ 360
Query: 353 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 412
EFGD EL +AFQ FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ+AI+MMNGCQLGGK
Sbjct: 361 EFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQSAISMMNGCQLGGK 420
Query: 413 KLKVQLKRD-NKQNKPY 428
KLKVQLKRD NKQNKPY
Sbjct: 421 KLKVQLKRDNNKQNKPY 437
>gi|359479768|ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
vinifera]
Length = 447
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/447 (79%), Positives = 392/447 (87%), Gaps = 19/447 (4%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE+ K +K+SE+ VKLFVGQVPK+MTEAQLLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEAPKPRKASEDSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGML 110
VICPSRQEADKAVNACHNK+TLPGASSPLQVKYADGELERL EHKLF+GML
Sbjct: 61 VICPSRQEADKAVNACHNKRTLPGASSPLQVKYADGELERLGVIFCHPCYPEHKLFVGML 120
Query: 111 PKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
PKNVSEAEVS+LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME
Sbjct: 121 PKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 180
Query: 171 GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGY 229
GSSVPLVVKWADTEKERQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGYGY
Sbjct: 181 GSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGY 240
Query: 230 QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
QA G+YGLMQYR+PPMQ+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + ++G
Sbjct: 241 QAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMG 300
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT-------GPPG 342
S YPA+PGLQYPM Y GG++ H+PL+ SPGS PA+ SN T+S G GPPG
Sbjct: 301 SAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPG 360
Query: 343 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 402
ANLFIYHIPQEFGD EL +AFQ FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ+AI+
Sbjct: 361 ANLFIYHIPQEFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQSAIS 420
Query: 403 MMNGCQLGGKKLKVQLKRD-NKQNKPY 428
MMNGCQLGGKKLKVQLKRD NKQNKPY
Sbjct: 421 MMNGCQLGGKKLKVQLKRDNNKQNKPY 447
>gi|224128620|ref|XP_002320377.1| predicted protein [Populus trichocarpa]
gi|222861150|gb|EEE98692.1| predicted protein [Populus trichocarpa]
Length = 432
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/425 (82%), Positives = 379/425 (89%), Gaps = 12/425 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+EE VKLFVGQVPK+MTEA+LLAMFK+FALVDEVNIIKDKTTRASRGCCF+ICPSRQEAD
Sbjct: 12 NEESVKLFVGQVPKNMTEAELLAMFKDFALVDEVNIIKDKTTRASRGCCFLICPSRQEAD 71
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS LFS YGTIK
Sbjct: 72 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSDLFSKYGTIK 131
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
DLQILRGSQQTSK CAFLKYETKEQALAALE INGKHKMEGSSVPLVVKWADTEKERQAR
Sbjct: 132 DLQILRGSQQTSKSCAFLKYETKEQALAALEDINGKHKMEGSSVPLVVKWADTEKERQAR 191
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
RAQKAQSQA +PN DSQHPSLFGALPMGYAPPYNGYGYQA G YGLM YRLPPMQNQP
Sbjct: 192 RAQKAQSQA--MPNTDSQHPSLFGALPMGYAPPYNGYGYQAPGVYGLMPYRLPPMQNQPA 249
Query: 251 FHGIIPPVNQGNAMRGA-SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
FH ++PPVNQGN +RG PDLS N+ PRNYA P+ ++GS YP V GLQYP+ YPG M+
Sbjct: 250 FHSMVPPVNQGNVLRGGIRPDLSPNISPRNYA--PATYMGSAYPTVTGLQYPVAYPGAMM 307
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGG-------TGPPGANLFIYHIPQEFGDQELGNA 362
HRPL++SPG++SP V +SN +T S G GPPGANLFIYHIPQEFGDQEL NA
Sbjct: 308 THRPLSSSPGALSPTVVSSNSATPSGVGGSSGVQVEGPPGANLFIYHIPQEFGDQELANA 367
Query: 363 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
F+AFG+VLSAKVFVDK TGVSKCFGFVSY+SPA+AQNAI MMNG QLGGKKLKVQLKRDN
Sbjct: 368 FEAFGKVLSAKVFVDKVTGVSKCFGFVSYDSPAAAQNAITMMNGFQLGGKKLKVQLKRDN 427
Query: 423 KQNKP 427
KQ+KP
Sbjct: 428 KQSKP 432
>gi|356505495|ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 431
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/435 (82%), Positives = 386/435 (88%), Gaps = 11/435 (2%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E KSSEE VKLFVGQVPKHMTE +LLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEGKEESKSSEESVKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNK+TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE E+S
Sbjct: 61 VICPSREEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEIS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
ALFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQAL ALEAINGKHKMEGSSVPLVVKW
Sbjct: 121 ALFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALTALEAINGKHKMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKERQARRAQKAQSQA+N+P+ DSQHPSLFGALPM Y PPYNGYGYQA YGLM Y
Sbjct: 181 ADTEKERQARRAQKAQSQASNVPHTDSQHPSLFGALPMSYVPPYNGYGYQAPVGYGLMPY 240
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQY 300
R+PPMQ+Q G+H ++P +NQGNA+R PDL NM PRNY +PP+ +VGS YPAVPGLQ+
Sbjct: 241 RMPPMQSQHGYHNMMPHMNQGNALR---PDLGPNMNPRNYHVPPASYVGS-YPAVPGLQH 296
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSS-----SGG--TGPPGANLFIYHIPQE 353
PM YP GM+ RP+N SPGSVSPA N+N + SS SGG GPPGANLFIYHIPQE
Sbjct: 297 PMAYPTGMISPRPMNTSPGSVSPASGNNNHAASSGASKNSGGQAEGPPGANLFIYHIPQE 356
Query: 354 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 413
FGDQEL AFQ FGRVLSAKVFVDKATGVSKCFGFVSY++P +AQ+AI+MMNGCQLGGKK
Sbjct: 357 FGDQELATAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAISMMNGCQLGGKK 416
Query: 414 LKVQLKRDNKQNKPY 428
LKVQLKRDNKQ KPY
Sbjct: 417 LKVQLKRDNKQGKPY 431
>gi|356572661|ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-like [Glycine max]
Length = 429
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/421 (80%), Positives = 372/421 (88%), Gaps = 11/421 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHMTE +LLAMFKEFALVDEVNIIKDK TRASRGCCF+ICPSR+EADKAVN
Sbjct: 13 VKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFLICPSREEADKAVN 72
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE E+SALFS YGTIKDLQI
Sbjct: 73 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEISALFSKYGTIKDLQI 132
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME SSVPLVVKWADTEKERQARRAQK
Sbjct: 133 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEDSSVPLVVKWADTEKERQARRAQK 192
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGI 254
AQSQA+N+P+ DSQH S+FGALPM Y PPYNGY YQA G YGLM YR+PPMQ+Q G+H +
Sbjct: 193 AQSQASNVPHTDSQHLSMFGALPMSYVPPYNGYAYQAPGGYGLMPYRMPPMQSQHGYHNV 252
Query: 255 IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL 314
+P +NQ NA+R PDL NM PRNY +PP+ +V S YPAVPGLQ+PM YP GM+ RP+
Sbjct: 253 MPHMNQVNALR---PDLGPNMNPRNYHVPPASYV-SSYPAVPGLQHPMAYPTGMISPRPM 308
Query: 315 NNSPGSVSP-----AVANSNPSTSSSGG--TGPPGANLFIYHIPQEFGDQELGNAFQAFG 367
N SPGSVSP + A S+ ++ +SGG GPPGANLFIYHIPQEFGDQEL AFQ FG
Sbjct: 309 NTSPGSVSPAGGNNSSAASSGASKNSGGQVEGPPGANLFIYHIPQEFGDQELATAFQPFG 368
Query: 368 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 427
RVLSAKVFVDKATGVSKCFGFVSY++P +AQ+AI+MMNGCQLGGKKLKVQLKRDNKQ KP
Sbjct: 369 RVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAISMMNGCQLGGKKLKVQLKRDNKQGKP 428
Query: 428 Y 428
Y
Sbjct: 429 Y 429
>gi|449462310|ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
gi|449491521|ref|XP_004158924.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
Length = 438
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/441 (78%), Positives = 375/441 (85%), Gaps = 16/441 (3%)
Query: 1 MAESKK--EKKSS-----EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR 53
MAE + E+K S E+ VKLFVGQVPKHMTE QLL MF+EFALVDEVNII+DKTTR
Sbjct: 1 MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60
Query: 54 ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 113
ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN
Sbjct: 61 ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120
Query: 114 VSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 173
VSE EVS LFS YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+AALEAINGK KMEGSS
Sbjct: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180
Query: 174 VPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASG 233
VPLVVKWADTEKERQAR+AQKAQSQA N+ NADSQHPSLFGA+P+GY PPYNGYGYQA G
Sbjct: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240
Query: 234 SYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP 293
SYGLMQY LPPMQNQ GF +IP +NQGNAMRG PDL M RNYAMPP+ + S YP
Sbjct: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP 298
Query: 294 AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSS----SGG--TGPPGANLFI 347
VP LQ+PM YPGGM+ +++SPG P N TSS SGG GPPGANLFI
Sbjct: 299 GVPALQHPMAYPGGMMSPGVVSSSPGP-GPFTGGKNSPTSSMGKGSGGQIEGPPGANLFI 357
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
YHIPQEFGD+EL N+F+AFGRVLSAKVFVDK +GVSKCFGFVSY+S +AQ+AI+ MNGC
Sbjct: 358 YHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGC 417
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
QLGGKKLKVQLKRDNKQ+KPY
Sbjct: 418 QLGGKKLKVQLKRDNKQSKPY 438
>gi|356535559|ref|XP_003536312.1| PREDICTED: CUGBP Elav-like family member 1-B-like [Glycine max]
Length = 429
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/434 (77%), Positives = 372/434 (85%), Gaps = 12/434 (2%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E K SEE VKLFVGQVPK M E ++LAMFKEFALVDEVNII+DK +RASRGCCF
Sbjct: 2 MAEGKEESKFSEESVKLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRASRGCCF 61
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN+SE EVS
Sbjct: 62 VICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEDEVS 121
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LFS+YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKH MEGSSVPLVVKW
Sbjct: 122 DLFSMYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHTMEGSSVPLVVKW 181
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKER ARRAQKAQSQ +N+P AD QHPSLFGALPMGY PPYNGYGYQA G YGLM Y
Sbjct: 182 ADTEKERLARRAQKAQSQVSNMPQADPQHPSLFGALPMGYVPPYNGYGYQAPGGYGLMAY 241
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQY 300
R PPMQNQPGFH + +NQ NA+R PDL ++ PRNY PP+ ++G YPAVPG+Q+
Sbjct: 242 RFPPMQNQPGFHNM--NMNQVNAVR---PDLGHSVNPRNYHAPPASYIGP-YPAVPGVQH 295
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT------GPPGANLFIYHIPQEF 354
PM YP ++ RP+++S GSVSPA NSN S+S + + GPPGANLFIYHIPQE+
Sbjct: 296 PMVYPRRIVSPRPMSSSSGSVSPAGGNSNSSSSGASKSSSGQIEGPPGANLFIYHIPQEY 355
Query: 355 GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKL 414
GD+EL FQ FGRVLSAK+FVDK TGVSKCFGFVSY++P +AQ+AI+ MNGCQLGGKKL
Sbjct: 356 GDEELATTFQPFGRVLSAKIFVDKVTGVSKCFGFVSYDTPEAAQSAISTMNGCQLGGKKL 415
Query: 415 KVQLKRDNKQNKPY 428
KVQLKRDNKQ+K Y
Sbjct: 416 KVQLKRDNKQSKIY 429
>gi|356500250|ref|XP_003518946.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 426
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/434 (77%), Positives = 369/434 (85%), Gaps = 14/434 (3%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E KSSEE VKLFVGQVPK M+E ++LAMFKE ALVDEVNII+DK TRASRGCCF
Sbjct: 1 MAEGKEESKSSEESVKLFVGQVPKRMSEDEVLAMFKELALVDEVNIIRDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN+SE EVS
Sbjct: 61 VICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEDEVS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LFS YGTIKDLQILRGSQ TSKGCAFLKYETKEQA ALEAINGKH MEGSSVPLVVKW
Sbjct: 121 NLFSKYGTIKDLQILRGSQHTSKGCAFLKYETKEQAFTALEAINGKHTMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKER ARRAQK QS+ +N P+AD QHPSLFGALPMGY PPYNGYGYQA G YGLM Y
Sbjct: 181 ADTEKERLARRAQKTQSRVSNAPHADPQHPSLFGALPMGYVPPYNGYGYQAPGGYGLMPY 240
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQY 300
R PP+QNQPGFH + NQ NA+R PDL +M PRNY PP+ ++GS YPAVPG+Q+
Sbjct: 241 RFPPVQNQPGFHNM----NQANAVR---PDLGHSMNPRNYPAPPASYIGS-YPAVPGIQH 292
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT------GPPGANLFIYHIPQEF 354
PM YP G++ RP+++ PGSVSPA NSN S+S + + GPPGANLFIYHIPQE+
Sbjct: 293 PMVYPRGIVSPRPMSSCPGSVSPAGGNSNSSSSGASKSSSGQIEGPPGANLFIYHIPQEY 352
Query: 355 GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKL 414
GDQEL AFQ FGRVLSAK+FVDK TGVSKCFGFVSY++P +AQ AI+ MNGCQLGGKKL
Sbjct: 353 GDQELTTAFQPFGRVLSAKIFVDKVTGVSKCFGFVSYDTPEAAQAAISTMNGCQLGGKKL 412
Query: 415 KVQLKRDNKQNKPY 428
KVQLKRDNKQ+K Y
Sbjct: 413 KVQLKRDNKQSKIY 426
>gi|224068763|ref|XP_002302819.1| predicted protein [Populus trichocarpa]
gi|222844545|gb|EEE82092.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/414 (78%), Positives = 350/414 (84%), Gaps = 36/414 (8%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHMTE ++LAMFKEFALVDEVNIIKDKTTRASRGCCF+ICPSRQEADKAVN
Sbjct: 19 VKLFVGQVPKHMTEDEVLAMFKEFALVDEVNIIKDKTTRASRGCCFLICPSRQEADKAVN 78
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAE+S LFS YG IKDLQI
Sbjct: 79 ACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAELSDLFSKYGIIKDLQI 138
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRGSQQTSKGCAFLKYETKEQA AALE INGKHKMEGSSVPLVVKWADTEKERQARRAQK
Sbjct: 139 LRGSQQTSKGCAFLKYETKEQAHAALEDINGKHKMEGSSVPLVVKWADTEKERQARRAQK 198
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGI 254
AQSQA +PN DSQHPSLFGALPMGYAPPYNGYGYQA G+Y L+ YRL
Sbjct: 199 AQSQA--MPNTDSQHPSLFGALPMGYAPPYNGYGYQAPGAYELVPYRL------------ 244
Query: 255 IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL 314
G PDLS N+ PRNYA P+G++GS YP +PGLQYP+ YPG ++ HRPL
Sbjct: 245 ---------RGGIRPDLSLNISPRNYA--PAGYMGSAYPTMPGLQYPIAYPGAIMSHRPL 293
Query: 315 NNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKV 374
+NSPG++SP V PS PPGANLFIYHIPQEFGDQEL N FQAFG+VLSAKV
Sbjct: 294 SNSPGTLSPTV----PSC-------PPGANLFIYHIPQEFGDQELANTFQAFGQVLSAKV 342
Query: 375 FVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FVDKAT VSKCFGFVSY+SPA+AQNAI MMNGCQLGGK LKVQLK+DNKQ+KPY
Sbjct: 343 FVDKATCVSKCFGFVSYDSPAAAQNAITMMNGCQLGGKMLKVQLKKDNKQSKPY 396
>gi|147772817|emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
Length = 450
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 318/450 (70%), Positives = 351/450 (78%), Gaps = 62/450 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE+ K +K+SE+ VKLFVGQVPK+MTEAQLLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEAPKPRKASEDSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACH-NKKTLPG----------------------------------- 84
VICPSRQEADKAVNACH +K+TLPG
Sbjct: 61 VICPSRQEADKAVNACHSDKRTLPGKHVNISHIGFMWHDAAADAWKIKATIVANENQQRK 120
Query: 85 ------------------ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
ASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS+LFS Y
Sbjct: 121 KCTREHTNFGLRLAFQVSASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSSLFSKY 180
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE
Sbjct: 181 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 240
Query: 187 RQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
RQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGYGYQA G+YGLMQYR+PPM
Sbjct: 241 RQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRMPPM 300
Query: 246 QNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYP 305
Q+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + ++GS YPA+PGLQYPM Y
Sbjct: 301 QSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYPMAYH 360
Query: 306 GGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT-------GPPGANLFIYHIPQEFGDQE 358
GG++ H+PL+ SPGS PA+ SN T+S G GPPGANLFIYHIPQEFGD E
Sbjct: 361 GGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLFIYHIPQEFGDHE 420
Query: 359 LGNAFQAFGRVLSAKVFVDKATGVSKCFGF 388
L +AFQ FGRVLSAKVFVDKATG SKCFG
Sbjct: 421 LAHAFQQFGRVLSAKVFVDKATGASKCFGI 450
>gi|115442121|ref|NP_001045340.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|20160777|dbj|BAB89718.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|20161317|dbj|BAB90241.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113534871|dbj|BAF07254.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|215704529|dbj|BAG94162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189701|gb|EEC72128.1| hypothetical protein OsI_05123 [Oryza sativa Indica Group]
gi|222619840|gb|EEE55972.1| hypothetical protein OsJ_04706 [Oryza sativa Japonica Group]
Length = 460
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 304/425 (71%), Positives = 351/425 (82%), Gaps = 15/425 (3%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHMTEA+LLAMF+E A+VDEV +IKDK T+ASRGCCF+ICPSR+EADKAVN
Sbjct: 40 VKLFVGQVPKHMTEAELLAMFQEVAIVDEVTVIKDKATKASRGCCFLICPSREEADKAVN 99
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A HNK TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG IKDLQI
Sbjct: 100 AYHNKHTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVTDTELTDLFSKYGNIKDLQI 159
Query: 135 LRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQ 193
LRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQ
Sbjct: 160 LRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQ 219
Query: 194 KAQSQANNLPNAD-SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
KAQ Q++N+P+A Q SLFGAL MGY P YNG+GYQ G+YGLMQY L PMQNQ F
Sbjct: 220 KAQLQSSNMPSASPMQQSSLFGALQMGYMPQYNGFGYQPPGTYGLMQYPLSPMQNQATFP 279
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPMPYPGGMLGH 311
++ PVNQGN++RG +P+LS N PR++ AM + S YP VPG+QY YPGG++ +
Sbjct: 280 NMVQPVNQGNSIRGVNPELSPNSVPRSFNAMQ----LSSPYPPVPGVQYAGSYPGGLMNN 335
Query: 312 RPLNNSPGSVSPAVA-----NSNPSTSSSGG--TGPPGANLFIYHIPQEFGDQELGNAFQ 364
RP NS S+ + S+ +S+ GG GPPGANLFIYHIPQ++GDQ+L NAFQ
Sbjct: 336 RPFGNSFSSIKVPIVNANSPASSSPSSNPGGQIEGPPGANLFIYHIPQDYGDQDLSNAFQ 395
Query: 365 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN-K 423
FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ AI +MNG QLG KKLKVQLKRDN K
Sbjct: 396 RFGRVLSAKVFVDKATGSSKCFGFVSYDSPASAQAAIGVMNGFQLGSKKLKVQLKRDNSK 455
Query: 424 QNKPY 428
+KP+
Sbjct: 456 HSKPF 460
>gi|326528321|dbj|BAJ93342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust.
Identities = 307/428 (71%), Positives = 350/428 (81%), Gaps = 13/428 (3%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
E VKLFVGQVPK MTEA+L AMF++ A+VDEV +I+DK T+ASRGCCF+ICPSR+EAD
Sbjct: 43 DESSVKLFVGQVPKLMTEAELAAMFRDVAIVDEVTVIRDKATKASRGCCFLICPSREEAD 102
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAVNA HNK+TLPGA SPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG IK
Sbjct: 103 KAVNAYHNKRTLPGAPSPLQVKYADGELERLEHKLFIGMLPKNVTDVEMTDLFSQYGNIK 162
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQA
Sbjct: 163 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQA 222
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
R+AQKAQ +N+ NA++ Q SLFGAL MGY PPYNG+GYQ G+YGLMQY L PMQNQ
Sbjct: 223 RKAQKAQYPPSNMSNANAMQQSSLFGALQMGYVPPYNGFGYQPQGTYGLMQYPLSPMQNQ 282
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGM 308
GF ++ PVNQG+++RG S +LS N R++ S +GS YPA PG+QYP YPGG
Sbjct: 283 AGFQNMVQPVNQGSSIRGVSSELSPNSVARSFN---SMQLGSPYPAGPGMQYPGSYPGGG 339
Query: 309 LGHRPLNNSPGSVSPAVANSNPSTSSSGGT-------GPPGANLFIYHIPQEFGDQELGN 361
+ RP NS SV AN+ TSSS G+ GPPGANLFIYHIPQEFGDQ+L +
Sbjct: 340 INSRPYMNSHNSVKVPNANATSPTSSSTGSNTGPQLEGPPGANLFIYHIPQEFGDQDLAH 399
Query: 362 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 421
AFQ+FGRVLSAKVFVDKATG SKCFGFVSY+SPA AQ AI+MMNG QLGGKKLKVQLKRD
Sbjct: 400 AFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNGFQLGGKKLKVQLKRD 459
Query: 422 N-KQNKPY 428
N K NK Y
Sbjct: 460 NSKHNKLY 467
>gi|357129324|ref|XP_003566314.1| PREDICTED: CUGBP Elav-like family member 2-like [Brachypodium
distachyon]
Length = 459
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 302/429 (70%), Positives = 347/429 (80%), Gaps = 17/429 (3%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E VKLFVGQVPK MTEA+L AMF++ A+VDEV +I+DK T+ SRGCCF+ICPSR+EADK
Sbjct: 36 ESSVKLFVGQVPKQMTEAELAAMFRDVAIVDEVTVIRDKATKVSRGCCFLICPSREEADK 95
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
AVNA HNK+TLPGA SPLQVKYADGELERLEHKLFIGMLPKNV++AE++ LFS YG IKD
Sbjct: 96 AVNAYHNKRTLPGAPSPLQVKYADGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKD 155
Query: 132 LQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR
Sbjct: 156 LQILRGSQQTSKAGCAFLKYETKEQAMAAIEALNGKHKIEGSSVPLVVKWADTEKERQAR 215
Query: 191 RAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
+AQKA Q +N+ NA + Q SLFGAL MGY P YNG+GYQ G+YGLMQY L PMQNQ
Sbjct: 216 KAQKAHFQPSNMSNATAMQQNSLFGALQMGYMPQYNGFGYQPQGTYGLMQYPLSPMQNQA 275
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
F ++ PVNQG+++RG + +LS N R++ S +GS YPA PG+QYP YPGG +
Sbjct: 276 AFQNMVQPVNQGSSIRGVNSELSPNSVTRSFN---SMQLGSPYPAAPGMQYPGSYPGGAI 332
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGT---------GPPGANLFIYHIPQEFGDQELG 360
RP NS ++ V N+N ++ +S T GPPGANLFIYHIPQEFGDQ+L
Sbjct: 333 NSRPYMNSHNAIK--VPNTNATSPTSSSTSSNPGPQIEGPPGANLFIYHIPQEFGDQDLA 390
Query: 361 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
NAFQ FGRVLSAKVFVDKATG SKCFGFVSY+SPASAQ AI+MMNG QLGGKKLKVQLKR
Sbjct: 391 NAFQNFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQAAISMMNGFQLGGKKLKVQLKR 450
Query: 421 DN-KQNKPY 428
DN K NK Y
Sbjct: 451 DNSKHNKLY 459
>gi|297809825|ref|XP_002872796.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
gi|297318633|gb|EFH49055.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 303/420 (72%), Positives = 347/420 (82%), Gaps = 15/420 (3%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGASS LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGASSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY-QASGSYGLMQYRLPPMQNQPGFHG 253
AQS L NAD +PSLFGALPMGY PPYNGYGY Q G+YG Y LPP+QNQ F
Sbjct: 198 AQSHIARLSNADPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YMLPPIQNQAAFPN 254
Query: 254 IIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+I NQG NA++G SPD + + RN+ MPP+ ++GSGYPAV G +P YP G++
Sbjct: 255 MIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPANYMGSGYPAVRGHPFPFAYPRGIVS 314
Query: 311 HRPLNNSPGSVSPAVANSNPSTSSSG--------GTGPPGANLFIYHIPQEFGDQELGNA 362
RPL++SPGS+SP +ANS ST+ G GP GANLFIY+IP+EFGDQEL A
Sbjct: 315 PRPLSSSPGSISPGIANSGMSTTPLGIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAA 374
Query: 363 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
FQ+FG VLSAKVFVDKATGVSKCFGFVSY+S A+AQNAI +MNG LGGKKLKVQLKRDN
Sbjct: 375 FQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDVMNGRHLGGKKLKVQLKRDN 434
>gi|326489549|dbj|BAK01755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 303/434 (69%), Positives = 347/434 (79%), Gaps = 17/434 (3%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
++ E+ VKLFVGQVPKHMTEA+L AMFK+ A+VDEV +IKDK T+ASRGCCFVICPSR
Sbjct: 24 REREEQSVKLFVGQVPKHMTEAELAAMFKDVAVVDEVTLIKDKATKASRGCCFVICPSRD 83
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYG 127
EADKAVNA HNK TLPGA+SPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG
Sbjct: 84 EADKAVNAYHNKHTLPGAASPLQVKYADGELERLEHKLFIGMLPKNVADTELTDLFSKYG 143
Query: 128 TIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
IKDLQILRGSQQTSK GCAF+KYE KEQA+AA+E +NGKHK+EGSSVPLVVKWADTEKE
Sbjct: 144 NIKDLQILRGSQQTSKAGCAFIKYEMKEQAVAAIEDLNGKHKIEGSSVPLVVKWADTEKE 203
Query: 187 RQARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
RQAR+AQKAQ Q+ N+PN S+FGAL MGY P YNG+ YQ G+YGLMQY L PM
Sbjct: 204 RQARKAQKAQLQSPNMPNGRPMPQSSVFGALQMGYMPQYNGFSYQPPGTYGLMQYPLSPM 263
Query: 246 QNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYP 305
QNQ F + PVNQGN++RG +P+LS N GPR++ +GS YPAVPG+QY YP
Sbjct: 264 QNQGPFQNMGQPVNQGNSIRGVNPELSPNSGPRSFN---PMHLGSPYPAVPGMQYQGSYP 320
Query: 306 GGMLGHRPLNN------SPGSVSPAVANSNPSTSSSGGT---GPPGANLFIYHIPQEFGD 356
GG + RP N PG +VA S P ++ G T GPPGANLFIYHIPQEFGD
Sbjct: 321 GGPMNSRPFGNPHNPLKVPGVNVNSVAFS-PRSNGGGQTQTEGPPGANLFIYHIPQEFGD 379
Query: 357 QELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKV 416
QEL +AFQ FGRV+SAKVFVDKATG SKCFGFVSY++P SAQ+AIAMMNG QLGGKKLKV
Sbjct: 380 QELSDAFQRFGRVISAKVFVDKATGSSKCFGFVSYDNPVSAQSAIAMMNGFQLGGKKLKV 439
Query: 417 QLKRD--NKQNKPY 428
QLKRD NK +KP+
Sbjct: 440 QLKRDNNNKHSKPF 453
>gi|242087741|ref|XP_002439703.1| hypothetical protein SORBIDRAFT_09g018610 [Sorghum bicolor]
gi|241944988|gb|EES18133.1| hypothetical protein SORBIDRAFT_09g018610 [Sorghum bicolor]
Length = 455
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 299/428 (69%), Positives = 349/428 (81%), Gaps = 13/428 (3%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L A+F+ ALVDEV +I+D+ TR SRGCCFVICPSR+EAD
Sbjct: 31 SRESVKLFVGQVPKQMSEAELAALFRGVALVDEVTVIRDRATRVSRGCCFVICPSREEAD 90
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV A HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV++AE++ LFS YG IK
Sbjct: 91 KAVTAYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTDAEMTDLFSKYGNIK 150
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+EGSSVPLVVKWADTEKERQA
Sbjct: 151 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKERQA 210
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY-RLPPMQN 247
R+AQKAQ Q++N+ N ++ Q S+FGAL MGY P YNG+GYQ G+YGLMQY L P+QN
Sbjct: 211 RKAQKAQFQSSNMLNPNAMQQNSVFGALQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQN 270
Query: 248 QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGG 307
Q F ++ PVNQG+++RGA+ +LS N PR++ S +GS Y +PGLQYP YPGG
Sbjct: 271 QTAFQNMVQPVNQGSSIRGANSELSPNSVPRSFN---SAQLGSPYSPLPGLQYPGVYPGG 327
Query: 308 MLGHRPLNNSPGSVSPAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGN 361
+ HRP +NS S +N+N +SS GPPGANLFIYHIPQEFGD +L N
Sbjct: 328 PINHRPFSNSHSSTKVQNSNANSPSSSPSSNPGPQIEGPPGANLFIYHIPQEFGDHDLAN 387
Query: 362 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 421
AF +FGRVLSAKVFVDKATGVSKCFGFVSY+SPASAQ AI++MNG QLGGKKLKVQLKRD
Sbjct: 388 AFHSFGRVLSAKVFVDKATGVSKCFGFVSYDSPASAQAAISVMNGYQLGGKKLKVQLKRD 447
Query: 422 N-KQNKPY 428
N K NKP+
Sbjct: 448 NSKHNKPF 455
>gi|413951358|gb|AFW84007.1| hypothetical protein ZEAMMB73_397161 [Zea mays]
Length = 455
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 294/419 (70%), Positives = 347/419 (82%), Gaps = 15/419 (3%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHM EA LLA+F+E A VDEV +IKDK T+ SRGCCFVICPSR+EADKAVN
Sbjct: 32 VKLFVGQVPKHMAEADLLALFREVAAVDEVTVIKDKATKVSRGCCFVICPSREEADKAVN 91
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A HNK+TL GASSPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG + DLQI
Sbjct: 92 AYHNKQTLSGASSPLQVKYADGELERLEHKLFIGMLPKNVTDTELTDLFSKYGNVTDLQI 151
Query: 135 LRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQ 193
LRGSQQT+K GCAF+KY+TK+QALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQ
Sbjct: 152 LRGSQQTNKAGCAFIKYQTKDQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQ 211
Query: 194 KAQSQANNLPNAD--SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
KAQSQ +++PNA QH S+FGAL MGY P YNG+GYQ G+YGLMQY L PMQNQ F
Sbjct: 212 KAQSQLSHIPNASPMQQHSSVFGALQMGYMPQYNGFGYQPPGTYGLMQYPLSPMQNQGPF 271
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
++ P+NQGN++RG +P++S + R++ AM +GS YPA+PG+QYP YPGG +G
Sbjct: 272 QNMVQPLNQGNSIRGVNPEVSPSSVQRSFNAMQ----LGSPYPAMPGMQYPGSYPGGPMG 327
Query: 311 HRPLNNSPGSVSPAVANSN-----PSTSSSGG--TGPPGANLFIYHIPQEFGDQELGNAF 363
+R L NS + +N+N +S++GG GPPGANLFIYHIPQE+GDQEL +AF
Sbjct: 328 NRHLGNSHNPIKAPNSNANSTVSSSPSSNAGGQVEGPPGANLFIYHIPQEYGDQELSSAF 387
Query: 364 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
Q+FGRV+SAKVFVDKATGVSKCFGFVSY+SPASAQ AI MNG QLGGKKLKVQLKR+N
Sbjct: 388 QSFGRVVSAKVFVDKATGVSKCFGFVSYDSPASAQAAINRMNGYQLGGKKLKVQLKREN 446
>gi|357126722|ref|XP_003565036.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Brachypodium distachyon]
Length = 450
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 302/426 (70%), Positives = 341/426 (80%), Gaps = 18/426 (4%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVGQVPKHMTE +LLAMF+E A VDEV +IKDK TRASRGCCF+ICPSR EADKA+NA
Sbjct: 30 KLFVGQVPKHMTEPELLAMFREVAAVDEVTVIKDKATRASRGCCFLICPSRDEADKAINA 89
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
HNK TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV + E++ LFS YG IKDLQIL
Sbjct: 90 YHNKHTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVEDTELTDLFSEYGNIKDLQIL 149
Query: 136 RGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
RGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQK
Sbjct: 150 RGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQK 209
Query: 195 AQSQANNLPNADSQ-HPSLFGALPMGYAP-PYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
AQ + N+PN S+FGAL MGY P YNG+ YQ G+YGLMQY L PMQNQ F
Sbjct: 210 AQLPSPNMPNGGPMPQSSVFGALQMGYLPHQYNGFSYQPPGTYGLMQYPLSPMQNQAAFQ 269
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPMPYPGGMLGH 311
++ P NQGN++RG +P+LS N R++ AM +GS YP VPG+QY YPGG + +
Sbjct: 270 NMVQP-NQGNSIRGVNPELSPNAVSRSFNAM----HLGSPYPGVPGMQYTGSYPGGPMSN 324
Query: 312 RPLNNSPGSVSPAVANSN-----PSTSSSGGT---GPPGANLFIYHIPQEFGDQELGNAF 363
RP NS + AN N PS++ G T GPPGANLFIYHIPQEFGDQEL +AF
Sbjct: 325 RPFGNSHNPLKVPSANVNSIAYSPSSNGGGQTQTEGPPGANLFIYHIPQEFGDQELSDAF 384
Query: 364 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN- 422
Q FGRV+SAKVFVDKATG SKCFGFVSY+SPASAQ+AI MMNG QLGGKKLKVQLKRDN
Sbjct: 385 QRFGRVVSAKVFVDKATGASKCFGFVSYDSPASAQSAIGMMNGFQLGGKKLKVQLKRDNS 444
Query: 423 KQNKPY 428
K +KP+
Sbjct: 445 KHSKPF 450
>gi|3924594|gb|AAC79095.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|4262139|gb|AAD14439.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|7270181|emb|CAB77796.1| putative ribonucleoprotein [Arabidopsis thaliana]
Length = 492
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 298/421 (70%), Positives = 344/421 (81%), Gaps = 13/421 (3%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY-QASGSYGLMQYRLPPMQNQPGFHG 253
AQS L N D +PSLFGALPMGY PPYNGYGY Q G+YG Y LPP+QNQ F
Sbjct: 198 AQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YMLPPIQNQAAFSN 254
Query: 254 IIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+I NQG NA++G SPD + + RN+ MPP ++GSGYPA+ G +P YP G++
Sbjct: 255 MIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVS 314
Query: 311 HRPLNNSPGSVSPAVANSNP----STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAF 366
RPL++SPGS+SP + S P +S GP GANLFIY+IP+EFGDQEL AFQ+F
Sbjct: 315 PRPLSSSPGSISPGM--STPLGIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAFQSF 372
Query: 367 GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
G VLSAKVFVDKATGVSKCFGFVSY+S A+AQNAI MMNG LGGKKLKVQLKRD+ +
Sbjct: 373 GIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLGGKKLKVQLKRDSNNGQ 432
Query: 427 P 427
P
Sbjct: 433 P 433
>gi|18412143|ref|NP_567249.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
gi|21536899|gb|AAM61231.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|222423375|dbj|BAH19660.1| AT4G03110 [Arabidopsis thaliana]
gi|332656872|gb|AEE82272.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
Length = 441
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 298/421 (70%), Positives = 344/421 (81%), Gaps = 13/421 (3%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY-QASGSYGLMQYRLPPMQNQPGFHG 253
AQS L N D +PSLFGALPMGY PPYNGYGY Q G+YG Y LPP+QNQ F
Sbjct: 198 AQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YMLPPIQNQAAFSN 254
Query: 254 IIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+I NQG NA++G SPD + + RN+ MPP ++GSGYPA+ G +P YP G++
Sbjct: 255 MIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVS 314
Query: 311 HRPLNNSPGSVSPAVANSNP----STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAF 366
RPL++SPGS+SP + S P +S GP GANLFIY+IP+EFGDQEL AFQ+F
Sbjct: 315 PRPLSSSPGSISPGM--STPLGIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAFQSF 372
Query: 367 GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
G VLSAKVFVDKATGVSKCFGFVSY+S A+AQNAI MMNG LGGKKLKVQLKRD+ +
Sbjct: 373 GIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLGGKKLKVQLKRDSNNGQ 432
Query: 427 P 427
P
Sbjct: 433 P 433
>gi|226492020|ref|NP_001152526.1| LOC100286166 [Zea mays]
gi|195657131|gb|ACG48033.1| RNA binding protein [Zea mays]
Length = 463
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 294/429 (68%), Positives = 348/429 (81%), Gaps = 25/429 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHM EA LLA+F+E A VDEV +IKDK T+ SRGCCFVICPSR+EADKAVN
Sbjct: 30 VKLFVGQVPKHMAEADLLALFREVAAVDEVTVIKDKATKVSRGCCFVICPSREEADKAVN 89
Query: 75 ACHNKKTLPG----------ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFS 124
A HNK+TL G ASSPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS
Sbjct: 90 AYHNKQTLSGVCEHTTNLVLASSPLQVKYADGELERLEHKLFIGMLPKNVTDTELTDLFS 149
Query: 125 IYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
YG + DLQILRGSQQT+K GCAF+KY+TK+QALAA+EA+NGKHK+EGSSVPLVVKWADT
Sbjct: 150 KYGNVTDLQILRGSQQTNKAGCAFIKYQTKDQALAAIEALNGKHKIEGSSVPLVVKWADT 209
Query: 184 EKERQARRAQKAQSQANNLPNAD--SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
EKERQAR+AQKAQSQ +++PNA QH S+FGAL MGY P YNG+GYQ +G+YGLMQY
Sbjct: 210 EKERQARKAQKAQSQLSHIPNASPMQQHSSVFGALQMGYMPQYNGFGYQPTGTYGLMQYP 269
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQY 300
L PMQNQ F ++ P+NQGN++RG +P++S + R++ AM +GS YPA+PG+QY
Sbjct: 270 LSPMQNQGPFQNMVQPLNQGNSIRGVNPEVSPSSVQRSFNAMQ----LGSPYPAMPGMQY 325
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTS-----SSGG--TGPPGANLFIYHIPQE 353
P YPGG +G+R L NS + +N+N + S ++GG GPPGANLFIYHIPQE
Sbjct: 326 PGSYPGGPMGNRHLGNSHNPIKVPNSNANSTVSSSPSSNAGGQVEGPPGANLFIYHIPQE 385
Query: 354 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 413
+GDQEL +AFQ+FGRV+SAKVFVDKATGVSKCFGFVSY+SPASAQ AI MNG QLGGKK
Sbjct: 386 YGDQELSSAFQSFGRVVSAKVFVDKATGVSKCFGFVSYDSPASAQAAINRMNGYQLGGKK 445
Query: 414 LKVQLKRDN 422
LKVQLKR+N
Sbjct: 446 LKVQLKREN 454
>gi|413944942|gb|AFW77591.1| hypothetical protein ZEAMMB73_325553 [Zea mays]
Length = 456
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 293/428 (68%), Positives = 346/428 (80%), Gaps = 13/428 (3%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L AMF+ ALVDEV +I+D+ TR SRGCCFVICPSR+EAD
Sbjct: 32 SRESVKLFVGQVPKQMSEAELAAMFRSVALVDEVTVIRDRVTRVSRGCCFVICPSREEAD 91
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV+ AE++ LFS YG IK
Sbjct: 92 KAVTTYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTHAEMTDLFSKYGNIK 151
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+EGSSVPLVVKWADTEKERQA
Sbjct: 152 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKERQA 211
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY-RLPPMQN 247
R+AQKAQ Q++N+ NA++ Q S+FG L MGY P YNG+GYQ G+YGLMQY L P+QN
Sbjct: 212 RKAQKAQFQSSNMLNANAMQQNSVFGGLQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQN 271
Query: 248 QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGG 307
Q F ++ PVNQG+++ GA+ ++S N PR++ S +GS Y +PGLQYP YPGG
Sbjct: 272 QAAFQNMVQPVNQGSSIHGANSEVSPNPVPRSFN---SAQLGSPYSPLPGLQYPGVYPGG 328
Query: 308 MLGHRPLNNSPGSVSPAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGN 361
+ HRP ++S S +++N +SS GPPGANLFIYHIPQEFGD +L +
Sbjct: 329 PINHRPFSSSHSSTKVQNSSANSPSSSPSSNPGPQIEGPPGANLFIYHIPQEFGDHDLAS 388
Query: 362 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 421
AF +FGRVLSAKVFVDKATGVSKCFGFVSY+SPASAQ AI++MNG QLGGKKLKVQLKRD
Sbjct: 389 AFHSFGRVLSAKVFVDKATGVSKCFGFVSYDSPASAQAAISVMNGYQLGGKKLKVQLKRD 448
Query: 422 N-KQNKPY 428
N K +KP+
Sbjct: 449 NSKHSKPF 456
>gi|357126724|ref|XP_003565037.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Brachypodium distachyon]
Length = 459
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 302/435 (69%), Positives = 341/435 (78%), Gaps = 27/435 (6%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVGQVPKHMTE +LLAMF+E A VDEV +IKDK TRASRGCCF+ICPSR EADKA+NA
Sbjct: 30 KLFVGQVPKHMTEPELLAMFREVAAVDEVTVIKDKATRASRGCCFLICPSRDEADKAINA 89
Query: 76 CHNKKTLPG---------ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
HNK TLPG ASSPLQVKYADGELERLEHKLFIGMLPKNV + E++ LFS Y
Sbjct: 90 YHNKHTLPGVCEHSSLVLASSPLQVKYADGELERLEHKLFIGMLPKNVEDTELTDLFSEY 149
Query: 127 GTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
G IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEK
Sbjct: 150 GNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEK 209
Query: 186 ERQARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAP-PYNGYGYQASGSYGLMQYRLP 243
ERQAR+AQKAQ + N+PN S+FGAL MGY P YNG+ YQ G+YGLMQY L
Sbjct: 210 ERQARKAQKAQLPSPNMPNGGPMPQSSVFGALQMGYLPHQYNGFSYQPPGTYGLMQYPLS 269
Query: 244 PMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPM 302
PMQNQ F ++ P NQGN++RG +P+LS N R++ AM +GS YP VPG+QY
Sbjct: 270 PMQNQAAFQNMVQP-NQGNSIRGVNPELSPNAVSRSFNAM----HLGSPYPGVPGMQYTG 324
Query: 303 PYPGGMLGHRPLNNSPGSVSPAVANSN-----PSTSSSGGT---GPPGANLFIYHIPQEF 354
YPGG + +RP NS + AN N PS++ G T GPPGANLFIYHIPQEF
Sbjct: 325 SYPGGPMSNRPFGNSHNPLKVPSANVNSIAYSPSSNGGGQTQTEGPPGANLFIYHIPQEF 384
Query: 355 GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKL 414
GDQEL +AFQ FGRV+SAKVFVDKATG SKCFGFVSY+SPASAQ+AI MMNG QLGGKKL
Sbjct: 385 GDQELSDAFQRFGRVVSAKVFVDKATGASKCFGFVSYDSPASAQSAIGMMNGFQLGGKKL 444
Query: 415 KVQLKRDN-KQNKPY 428
KVQLKRDN K +KP+
Sbjct: 445 KVQLKRDNSKHSKPF 459
>gi|297604406|ref|NP_001055367.2| Os05g0373400 [Oryza sativa Japonica Group]
gi|215707181|dbj|BAG93641.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676313|dbj|BAF17281.2| Os05g0373400 [Oryza sativa Japonica Group]
Length = 466
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 300/429 (69%), Positives = 344/429 (80%), Gaps = 17/429 (3%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EE VKLFVGQVPK MTE +L AMF A+VDEV +I+DK T+ASRGCCF+ICPSR+EADK
Sbjct: 43 EESVKLFVGQVPKQMTEDELAAMFAAVAVVDEVTLIRDKATKASRGCCFLICPSREEADK 102
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
AVNA HNK+TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV++AE++ LFS YG IKD
Sbjct: 103 AVNAYHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKD 162
Query: 132 LQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LQILRGSQQTSK GCAFLKYETKEQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR
Sbjct: 163 LQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQAR 222
Query: 191 RAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
+AQKAQ +N+ N ++ Q SLFGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ
Sbjct: 223 KAQKAQFHPSNMSNPNAMQQSSLFGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQA 282
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
F ++ VNQG+++RG + +LS N PR++ S +GS Y VP +QYP YPG +
Sbjct: 283 AFPNMVQSVNQGSSIRGVNSELSPNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAI 339
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGT---------GPPGANLFIYHIPQEFGDQELG 360
RP NS S+ V N+N S+ +S T GPPGANLFIYHIPQEFGDQ+L
Sbjct: 340 NSRPFVNSHNSMK--VPNANASSPTSSSTSSNPGPQIEGPPGANLFIYHIPQEFGDQDLA 397
Query: 361 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
AFQ FGRVLSAKVFVDKATG+SKCFGF+SY+SPASAQ AI+MMNG QLGGKKLKVQLKR
Sbjct: 398 GAFQGFGRVLSAKVFVDKATGLSKCFGFISYDSPASAQTAISMMNGYQLGGKKLKVQLKR 457
Query: 421 DN-KQNKPY 428
DN K +K Y
Sbjct: 458 DNSKHSKTY 466
>gi|413948822|gb|AFW81471.1| hypothetical protein ZEAMMB73_420516 [Zea mays]
Length = 486
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 292/460 (63%), Positives = 346/460 (75%), Gaps = 45/460 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L+AMF+ ALVDEV +I+D+ TR SRGCCF+ICPSR+EAD
Sbjct: 30 SRESVKLFVGQVPKQMSEAELVAMFRGVALVDEVTVIRDRATRVSRGCCFLICPSREEAD 89
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV A HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV++AE+ LFS YG IK
Sbjct: 90 KAVTAYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTDAEMIDLFSKYGNIK 149
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKME------------------- 170
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+E
Sbjct: 150 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEFRMKDAYRDCNLQTSPISH 209
Query: 171 -------------GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGAL 216
GSSVPLVVKWADTEKERQAR+AQK+ Q++N+ NA++ + S+FGAL
Sbjct: 210 TLDGTSSLHIIVLGSSVPLVVKWADTEKERQARKAQKSPFQSSNMLNANAMRQNSVFGAL 269
Query: 217 PMGYAPPYNGYGYQASGSYGLMQYR-LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNM 275
MGY P YNG+GYQ G+YGLMQY L P+QNQ F ++ P+NQ ++ RGA+ +L ++
Sbjct: 270 QMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQNQAAFQNMVQPINQASSTRGANSELPPDL 329
Query: 276 GPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSS 335
PR++ S +GS Y +PGLQYP YPGG + HRP +NS S N+N +SS
Sbjct: 330 VPRSFN---STQLGSPYSPLPGLQYPGVYPGGPINHRPFSNSHSSTKVQNLNANLPSSSP 386
Query: 336 GGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 389
GPPGANLFIYHIPQEFGD +L NAF +FGRVLSAKVFVDKATGVSKCFGFV
Sbjct: 387 SSNPAPQIEGPPGANLFIYHIPQEFGDHDLANAFHSFGRVLSAKVFVDKATGVSKCFGFV 446
Query: 390 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN-KQNKPY 428
SY+SPASAQ AI++MNG QLGGKKLKVQLKRDN K +KP+
Sbjct: 447 SYDSPASAQAAISVMNGYQLGGKKLKVQLKRDNSKHSKPF 486
>gi|22329313|ref|NP_171845.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449591|dbj|BAC41921.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|28950997|gb|AAO63422.1| At1g03457 [Arabidopsis thaliana]
gi|332189452|gb|AEE27573.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 429
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 284/429 (66%), Positives = 331/429 (77%), Gaps = 27/429 (6%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE E +EERVKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF
Sbjct: 1 MAEETME---NEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCF 57
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE EV
Sbjct: 58 LTCPTREDADKVINSFHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSETEVQ 117
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H MEG++VPL+VKW
Sbjct: 118 SLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKW 177
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYGY G+YG Y
Sbjct: 178 ADTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---Y 231
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP-----RNYAMPPSGFVGSGYPAV 295
LPP+Q Q FH +I P NQGN L+ ++ P RN+ P+ GY
Sbjct: 232 MLPPIQTQHAFHNVISP-NQGNGRALQGTALTESVPPRLAPRRNF---PTALGNYGY--- 284
Query: 296 PGLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSSGGT-GPPGANLFIYHIPQE 353
GLQYPM +P GM+ R PL +VSP ++N+ S SS T GP GANLFIY+IP+E
Sbjct: 285 HGLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSSLQTEGPAGANLFIYNIPRE 340
Query: 354 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 413
F DQEL FQ FG+VLSAKVFVDKATG+SKCFGF+SY+S A+AQNAI MNGCQL GKK
Sbjct: 341 FEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGCQLSGKK 400
Query: 414 LKVQLKRDN 422
LKVQLKRDN
Sbjct: 401 LKVQLKRDN 409
>gi|297848560|ref|XP_002892161.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
gi|297338003|gb|EFH68420.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
Length = 435
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 285/438 (65%), Positives = 327/438 (74%), Gaps = 29/438 (6%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
+E +EERVKLFVGQVPKHMTE QLL +F EF++VDEVNIIK+KTTR RGCCF+ CPS
Sbjct: 3 EETMENEERVKLFVGQVPKHMTEIQLLTLFSEFSIVDEVNIIKEKTTRVPRGCCFLTCPS 62
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSE 116
R+EADK +N HNKKTLPGASSPLQVKYADGE ERL EHKLF+GMLPKNVSE
Sbjct: 63 REEADKVINGFHNKKTLPGASSPLQVKYADGERERLDVLDCSCNPEHKLFVGMLPKNVSE 122
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
EV +LFS YGTIKDLQILRGS QTSKGC FLKYE KEQA+ A+EA+NG+H MEG++VPL
Sbjct: 123 TEVQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYEFKEQAVTAMEALNGRHIMEGANVPL 182
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
+VKWADTE+ERQARR QK QS + D Q+PS+FGALPM Y PPYNGYGY G+YG
Sbjct: 183 IVKWADTERERQARRLQKVQSHVS---RPDPQNPSMFGALPMAYVPPYNGYGYHVPGTYG 239
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP--PSGFVGSGYPA 294
Y LPP+Q QP FH +I P NQGN L+ ++ PR A P+ GY
Sbjct: 240 ---YMLPPIQTQPAFHNVISP-NQGNGRALLGTALTESVPPRLAARRNFPTALGNYGY-- 293
Query: 295 VPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT-GPPGANLFIYHIPQE 353
GLQYPM +P GM+ RP +VSP ++N+ S S T GP GANLFIY+IP+E
Sbjct: 294 -HGLQYPMAFPRGMVPPRP---PLTTVSPGISNNGTSIPSLLQTEGPAGANLFIYNIPRE 349
Query: 354 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 413
FGDQEL AFQ FG+VLSAKVFVDKATG+SKCFGF+SY+S A+AQNAI MNGCQL GKK
Sbjct: 350 FGDQELAAAFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGCQLSGKK 409
Query: 414 LKVQLKRDNKQ----NKP 427
LKVQLKRDN Q NKP
Sbjct: 410 LKVQLKRDNGQQQQSNKP 427
>gi|42571323|ref|NP_973752.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189453|gb|AEE27574.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 438
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 284/438 (64%), Positives = 331/438 (75%), Gaps = 36/438 (8%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE E +EERVKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF
Sbjct: 1 MAEETME---NEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCF 57
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLP 111
+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERL EHKLF+GMLP
Sbjct: 58 LTCPTREDADKVINSFHNKKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLP 117
Query: 112 KNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
KNVSE EV +LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H MEG
Sbjct: 118 KNVSETEVQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEG 177
Query: 172 SSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQA 231
++VPL+VKWADTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYGY
Sbjct: 178 ANVPLIVKWADTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYGYHV 234
Query: 232 SGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP-----RNYAMPPSG 286
G+YG Y LPP+Q Q FH +I P NQGN L+ ++ P RN+ P+
Sbjct: 235 PGTYG---YMLPPIQTQHAFHNVISP-NQGNGRALQGTALTESVPPRLAPRRNF---PTA 287
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSSGGT-GPPGAN 344
GY GLQYPM +P GM+ R PL +VSP ++N+ S SS T GP GAN
Sbjct: 288 LGNYGY---HGLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSSLQTEGPAGAN 340
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LFIY+IP+EF DQEL FQ FG+VLSAKVFVDKATG+SKCFGF+SY+S A+AQNAI M
Sbjct: 341 LFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTM 400
Query: 405 NGCQLGGKKLKVQLKRDN 422
NGCQL GKKLKVQLKRDN
Sbjct: 401 NGCQLSGKKLKVQLKRDN 418
>gi|218196669|gb|EEC79096.1| hypothetical protein OsI_19721 [Oryza sativa Indica Group]
Length = 555
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 290/433 (66%), Positives = 335/433 (77%), Gaps = 21/433 (4%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EE VKLFVGQVPK MTE +L AMF A+VDEV +I+DK T+ASRGCCF+ICPSR+EADK
Sbjct: 43 EESVKLFVGQVPKQMTEDELAAMFAAVAVVDEVTLIRDKATKASRGCCFLICPSREEADK 102
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
AVNA HNK+TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV++AE++ LFS YG IKD
Sbjct: 103 AVNAYHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKD 162
Query: 132 LQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LQILRGSQQTSK GCAFLKYETKEQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR
Sbjct: 163 LQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQAR 222
Query: 191 RAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
+AQKAQ +N+ N ++ Q SLFGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ
Sbjct: 223 KAQKAQFHPSNMSNPNAMQQSSLFGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQA 282
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
F ++ VNQG+++RG + +LS N PR++ S +GS Y VP +QYP YPG +
Sbjct: 283 AFPNMVQSVNQGSSIRGVNSELSPNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAI 339
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGT---------GPPGANLFIYHIPQEFGDQELG 360
RP NS S+ V N+N S+ +S T GPPGANLFIYHIPQEFGDQ+L
Sbjct: 340 NSRPFVNSHNSMK--VPNANASSPTSSSTSSNPGPQIEGPPGANLFIYHIPQEFGDQDLA 397
Query: 361 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG-----GKKLK 415
AFQ FGRVLSAKVFVDKATG+SKCFGF+SY+SPASAQ AI+MMNG QLG G K
Sbjct: 398 GAFQGFGRVLSAKVFVDKATGLSKCFGFISYDSPASAQTAISMMNGYQLGERFAQGTKFT 457
Query: 416 VQLKRDNKQNKPY 428
+ N Q K +
Sbjct: 458 QKTAARNSQEKTH 470
>gi|9280669|gb|AAF86538.1|AC002560_31 F21B7.8 [Arabidopsis thaliana]
Length = 440
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/435 (64%), Positives = 327/435 (75%), Gaps = 40/435 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+EERVKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF+ CP+R++AD
Sbjct: 3 NEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDAD 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSA 121
K +N+ HNKKTLPGASSPLQVKYADGELERL EHKLF+GMLPKNVSE EV +
Sbjct: 63 KVINSFHNKKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLPKNVSETEVQS 122
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H MEG++VPL+VKWA
Sbjct: 123 LFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWA 182
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
DTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYGY G+YG Y
Sbjct: 183 DTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---YM 236
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP-----RNYAMPPSGFVGSGYPAVP 296
LPP+Q Q FH +I P NQGN L+ ++ P RN+ P+ GY
Sbjct: 237 LPPIQTQHAFHNVISP-NQGNGRALQGTALTESVPPRLAPRRNF---PTALGNYGY---H 289
Query: 297 GLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSSGGT--------GPPGANLFI 347
GLQYPM +P GM+ R PL +VSP ++N+ S SS T GP GANLFI
Sbjct: 290 GLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSSLQTEAISLMFSGPAGANLFI 345
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
Y+IP+EF DQEL FQ FG+VLSAKVFVDKATG+SKCFGF+SY+S A+AQNAI MNGC
Sbjct: 346 YNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGC 405
Query: 408 QLGGKKLKVQLKRDN 422
QL GKKLKVQLKRDN
Sbjct: 406 QLSGKKLKVQLKRDN 420
>gi|30679366|ref|NP_849294.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
gi|17529054|gb|AAL38737.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|332656873|gb|AEE82273.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
Length = 439
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 269/385 (69%), Positives = 314/385 (81%), Gaps = 12/385 (3%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGI 254
AQS L N D +PSLFGALPMGY PPYNGYGY G+YG Y LPP+QNQ F +
Sbjct: 198 AQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHPPGTYG---YMLPPIQNQAAFSNM 254
Query: 255 IPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGH 311
I NQG NA++G SPD + + RN+ MPP ++GSGYPA+ G +P YP G++
Sbjct: 255 IAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVSP 314
Query: 312 RPLNNSPGSVSPAVANSNP----STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFG 367
RPL++SPGS+SP + S P +S GP GANLFIY+IP+EFGDQEL AFQ+FG
Sbjct: 315 RPLSSSPGSISPGM--STPLGIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAFQSFG 372
Query: 368 RVLSAKVFVDKATGVSKCFGFVSYE 392
VLSAKVFVDKATGVSKCFG +S++
Sbjct: 373 IVLSAKVFVDKATGVSKCFGKLSFD 397
>gi|413944941|gb|AFW77590.1| hypothetical protein ZEAMMB73_325553 [Zea mays]
Length = 435
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/386 (67%), Positives = 308/386 (79%), Gaps = 12/386 (3%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L AMF+ ALVDEV +I+D+ TR SRGCCFVICPSR+EAD
Sbjct: 32 SRESVKLFVGQVPKQMSEAELAAMFRSVALVDEVTVIRDRVTRVSRGCCFVICPSREEAD 91
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV+ AE++ LFS YG IK
Sbjct: 92 KAVTTYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTHAEMTDLFSKYGNIK 151
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+EGSSVPLVVKWADTEKERQA
Sbjct: 152 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKERQA 211
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY-RLPPMQN 247
R+AQKAQ Q++N+ NA++ Q S+FG L MGY P YNG+GYQ G+YGLMQY L P+QN
Sbjct: 212 RKAQKAQFQSSNMLNANAMQQNSVFGGLQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQN 271
Query: 248 QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGG 307
Q F ++ PVNQG+++ GA+ ++S N PR++ S +GS Y +PGLQYP YPGG
Sbjct: 272 QAAFQNMVQPVNQGSSIHGANSEVSPNPVPRSFN---SAQLGSPYSPLPGLQYPGVYPGG 328
Query: 308 MLGHRPLNNSPGSVSPAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGN 361
+ HRP ++S S +++N +SS GPPGANLFIYHIPQEFGD +L +
Sbjct: 329 PINHRPFSSSHSSTKVQNSSANSPSSSPSSNPGPQIEGPPGANLFIYHIPQEFGDHDLAS 388
Query: 362 AFQAFGRVLSAKVFVDKATGVSKCFG 387
AF +FGRVLSAKVFVDKATGVSKCFG
Sbjct: 389 AFHSFGRVLSAKVFVDKATGVSKCFG 414
>gi|222631366|gb|EEE63498.1| hypothetical protein OsJ_18314 [Oryza sativa Japonica Group]
Length = 492
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/410 (64%), Positives = 308/410 (75%), Gaps = 24/410 (5%)
Query: 38 FALVDEVNIIKDKTTRAS---RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA 94
F ++D++ D R + GCCF+ICPSR+EADKAVNA HNK+TLPGASSPLQVKYA
Sbjct: 3 FLILDQLVHHFDLDLRCTGPFAGCCFLICPSREEADKAVNAYHNKRTLPGASSPLQVKYA 62
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETK 153
DGELERLEHKLFIGMLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETK
Sbjct: 63 DGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETK 122
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSL 212
EQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+ N ++ Q SL
Sbjct: 123 EQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSL 182
Query: 213 FGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLS 272
FGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ F ++ VNQG+++RG + +LS
Sbjct: 183 FGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGSSIRGVNSELS 242
Query: 273 SNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPST 332
N PR++ S +GS Y VP +QYP YPG + RP NS S+ V N+N S+
Sbjct: 243 PNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAINSRPFVNSHNSMK--VPNANASS 297
Query: 333 SSSGGT---------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 383
+S T GPPGANLFIYHIPQEFGDQ+L AFQ FGRVLSAKVFVDKATG+S
Sbjct: 298 PTSSSTSSNPGPQIEGPPGANLFIYHIPQEFGDQDLAGAFQGFGRVLSAKVFVDKATGLS 357
Query: 384 KCFGFVSYESPASAQNAIAMMNGCQLG-----GKKLKVQLKRDNKQNKPY 428
KCFGF+SY+SPASAQ AI+MMNG QLG G K + N Q K +
Sbjct: 358 KCFGFISYDSPASAQTAISMMNGYQLGERFAQGTKFTQKTAARNSQEKTH 407
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 13 ERV--KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
ER+ KLF+G +PK++T+A++ +F ++ + ++ I++ + GC F+ ++++A
Sbjct: 67 ERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAL 126
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGML-PKNVSEAEVSALFSIYGTI 129
A+ A + K + G+S PL VK+AD E ER K P N+S S++G +
Sbjct: 127 AAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSLFGAM 186
Query: 130 K 130
+
Sbjct: 187 Q 187
>gi|302786984|ref|XP_002975262.1| hypothetical protein SELMODRAFT_442777 [Selaginella moellendorffii]
gi|300156836|gb|EFJ23463.1| hypothetical protein SELMODRAFT_442777 [Selaginella moellendorffii]
Length = 427
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/436 (55%), Positives = 308/436 (70%), Gaps = 27/436 (6%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
K + + VKLFVGQ+PKH+T+ +LL +F+E V ++NIIKDK+T+ SRGCCF+ SR
Sbjct: 4 KSKAPDAVKLFVGQIPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTYSSRS 63
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYG 127
EAD A++ HNKKT+ +SP+QVKYADGELERLEHKLFIGMLPK+V+EAEV +FS YG
Sbjct: 64 EADNAIDLFHNKKTISPMNSPMQVKYADGELERLEHKLFIGMLPKSVTEAEVRDVFSEYG 123
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
IK+LQ+++GSQQT+K CAFLKYET+E+A A+EA+NG ++MEG+S LVVKWADTEKER
Sbjct: 124 NIKELQVIKGSQQTAKACAFLKYETREEAAGAVEALNGIYRMEGASSALVVKWADTEKER 183
Query: 188 QARRAQKAQ--SQANN--LPNADSQHP--SLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
QAR+ QK+Q S A N L Q P + FG LP+ P +NG+ YQAS +YG++ Y
Sbjct: 184 QARKMQKSQTLSPATNGALAAPLPQQPASASFGPLPLA-TPQFNGFAYQAS-TYGIVPYP 241
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSN-MGPRNYAMPPSGFVGSGYPAVPGLQY 300
+QNQP G+ Q ++ G D+ S + P + P+G+V S + V G QY
Sbjct: 242 ASSLQNQPLISGMTTGTTQ--SLPGTLSDIGSGVLTP----VQPAGYVNSAFSNVAGRQY 295
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVA--NSNP------STSSSGGTGPPGANLFIYHIPQ 352
P+ Y G +LG G+ + AV NS P ++ + GPPGANLFIYHIP
Sbjct: 296 PLAYQGALLGQA----YAGATTTAVVGYNSTPVAPKAKASITPQAEGPPGANLFIYHIPA 351
Query: 353 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 412
EFGD EL AF +FG V+SAKVFVDK TG+SKCFGFVSY+SP +AQ+AI +MNG QL GK
Sbjct: 352 EFGDSELSTAFASFGNVISAKVFVDKTTGISKCFGFVSYDSPEAAQSAINVMNGFQLSGK 411
Query: 413 KLKVQLKRDNKQNKPY 428
+LKVQLKRDNK NKPY
Sbjct: 412 RLKVQLKRDNKPNKPY 427
>gi|168043683|ref|XP_001774313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674305|gb|EDQ60815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/428 (57%), Positives = 297/428 (69%), Gaps = 39/428 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ VKLFVGQ+PK M+E QL+ +F E V+E+NIIKDK T+ SRGCCF+ +RQEADKA
Sbjct: 14 DSVKLFVGQLPKQMSEQQLVEIFSEAGTVNEINIIKDKLTKLSRGCCFLTYTTRQEADKA 73
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ HNK+TL +SPLQVKYADGE+ERLEHKLFIGMLPK S+A+V+A+FS YGTIK+L
Sbjct: 74 IEIFHNKRTLQPVASPLQVKYADGEMERLEHKLFIGMLPKAASKADVTAVFSQYGTIKEL 133
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+++GSQ TSKGCAFLKYETKEQA+AA+EA+NG HKMEGS LVVKWADTEKERQAR+
Sbjct: 134 SVIKGSQPTSKGCAFLKYETKEQAVAAIEALNGVHKMEGSPSALVVKWADTEKERQARKV 193
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYA---PPYNGYGYQASGSYGLMQYRLPPMQNQP 249
QKAQS ++ P PS+FGA+PMGY PPYNGY YQ +Y M Y QP
Sbjct: 194 QKAQSVSS--PPIPGHQPSIFGAVPMGYVTTPPPYNGYSYQPMSNYA-MAY-----PQQP 245
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYA-MPPSGFVGSGYPAVPGLQYPMPYPGGM 308
G G+ A+ G D+++ YA M P+ F QYP PY G M
Sbjct: 246 GMVGL------PTAIPGTQSDMTA------YAPMQPTTF------PFGAQQYPNPYQGQM 287
Query: 309 LGHRPLNNSPGSVSPAVANSNPST------SSSG--GTGPPGANLFIYHIPQEFGDQELG 360
+GH+ + P ++P + +N +S G GP GANLFIYHIP EFGD EL
Sbjct: 288 MGHQG-QSYPSPIAPLIGMNNAQAAAAAVRTSVGPQTEGPAGANLFIYHIPPEFGDDELS 346
Query: 361 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
AF +FG V+SAKVFVDK TG SKCFGFVSY++P +AQ AI +MNG QL GK+LKVQLKR
Sbjct: 347 TAFSSFGNVISAKVFVDKTTGASKCFGFVSYDTPDAAQAAINVMNGFQLSGKRLKVQLKR 406
Query: 421 DNKQNKPY 428
D KQ+KPY
Sbjct: 407 DTKQSKPY 414
>gi|302811484|ref|XP_002987431.1| hypothetical protein SELMODRAFT_269263 [Selaginella moellendorffii]
gi|300144837|gb|EFJ11518.1| hypothetical protein SELMODRAFT_269263 [Selaginella moellendorffii]
Length = 428
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/438 (55%), Positives = 306/438 (69%), Gaps = 30/438 (6%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
K + + VKLFVGQ+PKH+T+ +LL +F+E V ++NIIKDK+T+ SRGCCF+ SR
Sbjct: 4 KSKAPDAVKLFVGQIPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTYSSRS 63
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYG 127
EAD A++ HNKKT+ +SP+QVKYADGELERLEHKLFIGMLPK+V+EAEV +FS YG
Sbjct: 64 EADNAIDLFHNKKTISPMNSPMQVKYADGELERLEHKLFIGMLPKSVTEAEVRDVFSEYG 123
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
IK+LQ+++GSQQT+K CAFLKYET+E+A A+EA+NG ++MEG+S LVVKWADTEKER
Sbjct: 124 NIKELQVIKGSQQTAKACAFLKYETREEAAGAVEALNGIYRMEGASSALVVKWADTEKER 183
Query: 188 QARRAQKAQ--SQANN------LPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
QAR+ QK+Q S A N LP S FG LP+ P +NG+ YQAS +YG++
Sbjct: 184 QARKMQKSQTLSPATNGALAAPLPGQQPASAS-FGPLPLA-TPQFNGFAYQAS-TYGIVP 240
Query: 240 YRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSN-MGPRNYAMPPSGFVGSGYPAVPGL 298
Y +QNQP G+ Q + G D+ S + P + P+G+V S + V G
Sbjct: 241 YPASSLQNQPLISGMTTGTTQ--PLPGTLSDIGSGVLTP----VQPAGYVNSAFSNVAGR 294
Query: 299 QYPMPYPGGMLGHRPLNNSPGSVSPAVA--NSNP------STSSSGGTGPPGANLFIYHI 350
QYP+ Y G +LG G+ + AV NS P ++ + GPPGANLFIYHI
Sbjct: 295 QYPLAYQGALLGQA----YAGATTTAVVGYNSTPVAPKAKASITPQAEGPPGANLFIYHI 350
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
P EFGD EL AF +FG V+SAKVFVDK TG+SKCFGFVSY+SP +AQ+AI +MNG QL
Sbjct: 351 PAEFGDSELSTAFASFGNVISAKVFVDKTTGISKCFGFVSYDSPEAAQSAINVMNGFQLS 410
Query: 411 GKKLKVQLKRDNKQNKPY 428
GK+LKVQLKRDNK NKPY
Sbjct: 411 GKRLKVQLKRDNKPNKPY 428
>gi|168002776|ref|XP_001754089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694643|gb|EDQ80990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/447 (54%), Positives = 297/447 (66%), Gaps = 62/447 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ VKLFVGQ+PK M+E QL+ +F E V E+NIIKDK T+ SRGCCF+ +RQEADKA
Sbjct: 14 DSVKLFVGQLPKQMSEQQLVEVFSEAGTVHEINIIKDKLTKQSRGCCFLTYTTRQEADKA 73
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ HNK+TL +SPLQVKYADGE+ERLEHKLFIGMLPK S+A+V A+FS YG+IK+L
Sbjct: 74 IEIFHNKRTLQPVASPLQVKYADGEMERLEHKLFIGMLPKGASKADVMAVFSPYGSIKEL 133
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+++GSQ TSKGCAFLKYETKEQA+AA+EA+NG H+MEGS LVVKWADTEKERQAR+
Sbjct: 134 SVIKGSQPTSKGCAFLKYETKEQAIAAIEALNGVHRMEGSPSALVVKWADTEKERQARKV 193
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYA---PPYNGYGYQASGSYGLMQYRLPPMQN-- 247
QKAQS ++ P Q PS+FGA+PMGY PPYNGY YQ L+Q P+ N
Sbjct: 194 QKAQSVSS--PPIPGQQPSIFGAVPMGYVTAPPPYNGYPYQP-----LVQ----PISNYA 242
Query: 248 -----QPGFHGIIPPVNQGNAMRGASPDLSSN--MGPRNYAMPPSGFVGSGYPAVPGLQY 300
QPG G+ A+ G+ DL++ M P Y G QY
Sbjct: 243 IAYPQQPGMVGL------PTAIPGSQSDLTAYAPMQPATYPF-------------AGQQY 283
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT-------------------GPP 341
P+PY G ++GH+ + P + P++ N + ++ GP
Sbjct: 284 PVPYQGQIIGHQG-QSYPSPLPPSLIGMNTAQVAAAAIVHFVQFPTSVQAVCVLYLAGPA 342
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
GANLFIYHIP EFGDQEL AF +FG V+SAKVFVDK TG SKCFGFVSY++P +AQ AI
Sbjct: 343 GANLFIYHIPPEFGDQELSTAFSSFGNVISAKVFVDKTTGASKCFGFVSYDTPEAAQAAI 402
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+MNG QL GK+LKVQLKRD KQ KPY
Sbjct: 403 NVMNGFQLSGKRLKVQLKRDTKQRKPY 429
>gi|115473901|ref|NP_001060549.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|33354192|dbj|BAC81150.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|50510234|dbj|BAD31432.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|113612085|dbj|BAF22463.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|215713561|dbj|BAG94698.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 427
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/425 (51%), Positives = 286/425 (67%), Gaps = 22/425 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ERV+LFVGQVP+ M E +LA+ + A D+ +I+D+ T ASRGCCFV+C SR+EADKA
Sbjct: 10 ERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSREEADKA 69
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+ A HNK TLPGAS +QVKYADGELERL E KLFIGMLP++V E EVSALFS YG I+
Sbjct: 70 IAAYHNKCTLPGASRAMQVKYADGELERLAAEQKLFIGMLPRDVKENEVSALFSQYGNIR 129
Query: 131 DLQILRGSQQTSKG--CAFLKYETKEQALAALEAINGKHKM-EGSSVPLVVKWADTEKER 187
L++LR Q+T K CA L++ +KE A AA+EA+NG + GSS LVVK ADTE+E+
Sbjct: 130 QLKVLRSPQKTRKAAACAILEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTEREK 189
Query: 188 QARRAQKAQSQANNLPNADSQHPSLF---GALPMGYAPPYNGYGYQASGSYGLMQYRLPP 244
QAR+AQKAQ+Q + P P L GA M + PPYN Y+ G YG + L
Sbjct: 190 QARKAQKAQAQPSK-PLRFYLFPQLLSISGAPQMSFLPPYNVLDYKVPGHYGHTKNPLAL 248
Query: 245 MQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPR-NYAMPPSGFVGSGYPAVPGLQYPMP 303
+ + P VNQGN ++G + ++ P+ + + +G++ YP + GL YP+
Sbjct: 249 ------YSTMYPHVNQGNLLQGLNTNIFPGTDPKISNLIQSAGYIQPPYPDLSGLHYPVS 302
Query: 304 YPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQ 357
Y G ++G P S G V+ ++SN ++S++ GPP ANLF+Y IPQE+GD+
Sbjct: 303 YAGALVGDTPQYFSDGKVNIPNSHSNHASSAANTKIGSKIEGPPRANLFVYDIPQEYGDE 362
Query: 358 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 417
+L N FQ FGR+LS KVF+D+ATGVSKCFGFVSY++PASAQ AI MNG Q+GGK LKVQ
Sbjct: 363 DLANLFQEFGRILSTKVFIDRATGVSKCFGFVSYDTPASAQAAIRRMNGSQIGGKMLKVQ 422
Query: 418 LKRDN 422
LKR+
Sbjct: 423 LKRET 427
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETK 153
DGE +LF+G +P++++E ++ A+ D ++R + S+GC F+ ++
Sbjct: 4 DGEDGGERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSR 63
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
E+A A+ A + K + G+S + VK+AD E ER A
Sbjct: 64 EEADKAIAAYHNKCTLPGASRAMQVKYADGELERLA 99
>gi|218200205|gb|EEC82632.1| hypothetical protein OsI_27223 [Oryza sativa Indica Group]
gi|222637626|gb|EEE67758.1| hypothetical protein OsJ_25469 [Oryza sativa Japonica Group]
Length = 497
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 295/489 (60%), Gaps = 80/489 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ERV+LFVGQVP+ M E +LA+ + A D+ +I+D+ T ASRGCCFV+C SR+EADKA
Sbjct: 10 ERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSREEADKA 69
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+ A HNK TLPGAS +QVKYADGELERL E KLFIGMLP++V E EVSALFS YG I+
Sbjct: 70 IAAYHNKCTLPGASRAMQVKYADGELERLAAEQKLFIGMLPRDVKENEVSALFSQYGNIR 129
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM-EGSSVPLVVKWADTEKERQA 189
L++LR Q+T K CA L++ +KE A AA+EA+NG + GSS LVVK ADTE+E+QA
Sbjct: 130 QLKVLRSPQKTRKACAILEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTEREKQA 189
Query: 190 RRAQKAQSQANNLPNADSQHPSLF---GALPMGYAPPYNGYGYQASGSY-----GLM--- 238
R+AQKAQ+Q + P P L GA M + PPYN Y+ G+ LM
Sbjct: 190 RKAQKAQAQPSK-PLRFYLFPQLLSISGAPQMSFLPPYNVLDYKTEGTTDPELKDLMKMT 248
Query: 239 -------------------------------QYRLPPMQNQ----------------PGF 251
Q+ L P+++ PG
Sbjct: 249 NDKLEMLVTELKSVVNLLENRVTYNDPIQPIQHSLLPVEHDEKQYKPNECDSKTLEVPGH 308
Query: 252 HG-----------IIPPVNQGNAMRGASPDLSSNMGPR-NYAMPPSGFVGSGYPAVPGLQ 299
+G + P VNQGN ++G + ++ P+ + + +G++ YP + GL
Sbjct: 309 YGHTKNPLALYSTMYPHVNQGNLLQGLNTNIFPGTDPKISNLIQSAGYIQPPYPDLSGLH 368
Query: 300 YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG------TGPPGANLFIYHIPQE 353
YP+ Y G ++G P S G V+ ++SN ++S++ GPP ANLF+Y IPQE
Sbjct: 369 YPVSYAGALVGDTPQYFSDGKVNIPNSHSNHASSAANTKIGSKIEGPPRANLFVYDIPQE 428
Query: 354 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 413
+GD++L N FQ FGR+LS KVF+D+ATGVSKCFGFVSY++PASAQ AI MNG Q+GGK
Sbjct: 429 YGDEDLANLFQEFGRILSTKVFIDRATGVSKCFGFVSYDTPASAQAAIRRMNGSQIGGKM 488
Query: 414 LKVQLKRDN 422
LKVQLKR+
Sbjct: 489 LKVQLKRET 497
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETK 153
DGE +LF+G +P++++E ++ A+ D ++R + S+GC F+ ++
Sbjct: 4 DGEDGGERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSR 63
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
E+A A+ A + K + G+S + VK+AD E ER A
Sbjct: 64 EEADKAIAAYHNKCTLPGASRAMQVKYADGELERLA 99
>gi|49328140|gb|AAT58838.1| unknown protein, contains RNA recognition motif,PF00076 [Oryza
sativa Japonica Group]
Length = 381
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/289 (65%), Positives = 225/289 (77%), Gaps = 8/289 (2%)
Query: 38 FALVDEVNIIKDKTTRAS---RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA 94
F ++D++ D R + GCCF+ICPSR+EADKAVNA HNK+TLPGASSPLQVKYA
Sbjct: 42 FLILDQLVHHFDLDLRCTGPFAGCCFLICPSREEADKAVNAYHNKRTLPGASSPLQVKYA 101
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETK 153
DGELERLEHKLFIGMLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETK
Sbjct: 102 DGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETK 161
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSL 212
EQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+ N ++ Q SL
Sbjct: 162 EQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSL 221
Query: 213 FGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLS 272
FGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ F ++ VNQG+++RG + +LS
Sbjct: 222 FGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGSSIRGVNSELS 281
Query: 273 SNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSV 321
N PR++ S +GS Y VP +QYP YPG + RP NS S+
Sbjct: 282 PNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAINSRPFVNSHNSM 327
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+G +PK++T+A++ +F ++ + ++ I++ + GC F+ ++++A A+ A
Sbjct: 111 KLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEA 170
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGML-PKNVSEAEVSALFSIYGTIK 130
+ K + G+S PL VK+AD E ER K P N+S S++G ++
Sbjct: 171 LNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSLFGAMQ 226
>gi|327493207|gb|AEA86310.1| RNA-binding protein [Solanum nigrum]
Length = 187
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 168/188 (89%), Gaps = 1/188 (0%)
Query: 53 RASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPK 112
RASRGCCFVICPSR+EA+KA+ ACHNK+TLPGASSPLQVKYADG LERLEHKLF+GMLPK
Sbjct: 1 RASRGCCFVICPSREEANKAITACHNKQTLPGASSPLQVKYADGVLERLEHKLFVGMLPK 60
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
NVS+ EVS+LFS YGTI DLQILRGSQQ S+G AFLKYE KEQA+AA+EA+NGKH MEG+
Sbjct: 61 NVSDLEVSSLFSQYGTITDLQILRGSQQASRGYAFLKYEKKEQAIAAVEALNGKHTMEGA 120
Query: 173 SVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQAS 232
+VPLVVKWADTE+ERQARR QKA SQA+N N+ QHPSL+G+L MGY PPYNGY YQ
Sbjct: 121 TVPLVVKWADTERERQARRTQKALSQASNASNS-GQHPSLYGSLSMGYMPPYNGYAYQTP 179
Query: 233 GSYGLMQY 240
G+YGLMQY
Sbjct: 180 GTYGLMQY 187
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK++++ ++ ++F ++ + ++ I++ + +ASRG F+ +++A AV A
Sbjct: 52 KLFVGMLPKNVSDLEVSSLFSQYGTITDLQILRG-SQQASRGYAFLKYEKKEQAIAAVEA 110
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
+ K T+ GA+ PL VK+AD E ER
Sbjct: 111 LNGKHTMEGATVPLVVKWADTERER 135
>gi|388511171|gb|AFK43647.1| unknown [Medicago truncatula]
Length = 218
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/222 (72%), Positives = 180/222 (81%), Gaps = 13/222 (5%)
Query: 216 LPMGYAPPYNGYGYQASGSYGLMQYRLPP-MQNQPGFHGIIPPVNQGNAMRGASPDLSSN 274
+PMGY PPYNGYGYQA GSYGLM YR+PP MQNQPG+H ++P +NQGNA+R PDL N
Sbjct: 1 MPMGYVPPYNGYGYQAPGSYGLMPYRMPPPMQNQPGYHNMMPHMNQGNALR---PDLGPN 57
Query: 275 MGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSS 334
M PRNY +PP+ +VGS YPAVPGLQ+PM YPGGM+ RPLN+ PGSV P+ N N +TSS
Sbjct: 58 MNPRNYHVPPASYVGS-YPAVPGLQHPMAYPGGMISPRPLNSPPGSVLPSGGNGNSATSS 116
Query: 335 SG--------GTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 386
GPPGANLFIYHIPQEFGDQEL NAFQ FGRVLSAKVFVDKATGVSKCF
Sbjct: 117 GSSKNSGGGQAEGPPGANLFIYHIPQEFGDQELANAFQPFGRVLSAKVFVDKATGVSKCF 176
Query: 387 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
GFVSY+SP +AQ+AI+MMNGCQLGGKKLKVQ KRDNK KPY
Sbjct: 177 GFVSYDSPEAAQSAISMMNGCQLGGKKLKVQHKRDNKPGKPY 218
>gi|255636493|gb|ACU18585.1| unknown [Glycine max]
Length = 161
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 141/160 (88%), Positives = 149/160 (93%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E K SEE VKLFVGQVPK M E ++LAMFKEFALVDEVNII+DK +RA RGCCF
Sbjct: 2 MAEGKEESKFSEESVKLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRAPRGCCF 61
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN+SE EVS
Sbjct: 62 VICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEDEVS 121
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
LFS+YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL
Sbjct: 122 DLFSMYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 161
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEA 162
KLF+G +PK ++E EV A+F + + ++ I+R + + +GC F+ ++E+A A+ A
Sbjct: 17 KLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRAPRGCCFVICPSREEADKAVNA 76
Query: 163 INGKHKMEGSSVPLVVKWADTEKER 187
+ K + G+S PL VK+AD E ER
Sbjct: 77 CHNKKTLPGASSPLQVKYADGELER 101
>gi|270013480|gb|EFA09928.1| hypothetical protein TcasGA2_TC012080 [Tribolium castaneum]
Length = 469
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 172/433 (39%), Positives = 248/433 (57%), Gaps = 32/433 (7%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++++ + +K+FVGQVP+ M E L MF+E+ V +N+++DKTT AS+GCCFV +
Sbjct: 59 EQEQPDSDTIKMFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFT 118
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K + E +V LFS
Sbjct: 119 RKAALQAQDALHNVKTLNGMHHPIQMKPADSE-NRNERKLFVGMLSKKLCENDVRTLFSG 177
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YGTI++ +LR + SKGCAF+ + +K+ AL+A++A++ MEG S PLVVK+ADT+K
Sbjct: 178 YGTIEECTVLRDTAGNSKGCAFVTFASKQSALSAIKALHQSQTMEGCSAPLVVKFADTQK 237
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR---- 241
E++ +R Q+ Q+ N A S P ++P + + S L+Q
Sbjct: 238 EKELKRQQQIQANVWNALAAPQLQTS-----PQQFSPVLSN----DATSLQLLQAMSGGS 288
Query: 242 -LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSG----YPAVP 296
L P Q G ++ P+ N + L++ P + + +G G
Sbjct: 289 ALLPQQLLTGAENLLAPLGVQNLVT-----LAAMSQPTAAPLCVANLLGKGAGVERTLTT 343
Query: 297 GLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT-GPPGANLFIYHIPQEFG 355
GLQ M L+ ++ A N+ ++ GP G NLFIYH+PQEF
Sbjct: 344 GLQTGM-------STSDLSTYGSLITNATLNAAAIAAAGKQIEGPDGCNLFIYHLPQEFT 396
Query: 356 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 415
D +L + F FG V+SAKVF+DK T +SKCFGFVS+++ SAQ AIA MNG Q+G K+LK
Sbjct: 397 DTDLASTFLPFGPVISAKVFIDKQTNLSKCFGFVSFDNATSAQQAIAAMNGFQIGTKRLK 456
Query: 416 VQLKRDNKQNKPY 428
VQLKR +KPY
Sbjct: 457 VQLKRAKDASKPY 469
>gi|91090137|ref|XP_976135.1| PREDICTED: similar to arrest CG31762-PC isoform 4 [Tribolium
castaneum]
Length = 494
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/433 (39%), Positives = 248/433 (57%), Gaps = 32/433 (7%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++++ + +K+FVGQVP+ M E L MF+E+ V +N+++DKTT AS+GCCFV +
Sbjct: 84 EQEQPDSDTIKMFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFT 143
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K + E +V LFS
Sbjct: 144 RKAALQAQDALHNVKTLNGMHHPIQMKPADSE-NRNERKLFVGMLSKKLCENDVRTLFSG 202
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YGTI++ +LR + SKGCAF+ + +K+ AL+A++A++ MEG S PLVVK+ADT+K
Sbjct: 203 YGTIEECTVLRDTAGNSKGCAFVTFASKQSALSAIKALHQSQTMEGCSAPLVVKFADTQK 262
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR---- 241
E++ +R Q+ Q+ N A S P ++P + + S L+Q
Sbjct: 263 EKELKRQQQIQANVWNALAAPQLQTS-----PQQFSPVLSN----DATSLQLLQAMSGGS 313
Query: 242 -LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSG----YPAVP 296
L P Q G ++ P+ N + L++ P + + +G G
Sbjct: 314 ALLPQQLLTGAENLLAPLGVQNLVT-----LAAMSQPTAAPLCVANLLGKGAGVERTLTT 368
Query: 297 GLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT-GPPGANLFIYHIPQEFG 355
GLQ M L+ ++ A N+ ++ GP G NLFIYH+PQEF
Sbjct: 369 GLQTGM-------STSDLSTYGSLITNATLNAAAIAAAGKQIEGPDGCNLFIYHLPQEFT 421
Query: 356 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 415
D +L + F FG V+SAKVF+DK T +SKCFGFVS+++ SAQ AIA MNG Q+G K+LK
Sbjct: 422 DTDLASTFLPFGPVISAKVFIDKQTNLSKCFGFVSFDNATSAQQAIAAMNGFQIGTKRLK 481
Query: 416 VQLKRDNKQNKPY 428
VQLKR +KPY
Sbjct: 482 VQLKRAKDASKPY 494
>gi|410921166|ref|XP_003974054.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 3 [Takifugu
rubripes]
Length = 491
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/442 (38%), Positives = 244/442 (55%), Gaps = 50/442 (11%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 75 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 134
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 135 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 194
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 195 CTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRR 254
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q FG A P++ Y +S ++ LMQ + M G
Sbjct: 255 MQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQQQAAIMAASHG- 296
Query: 252 HGIIPP--------VNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMP 303
G + P ++Q A+ S + + PP+ S P++ P
Sbjct: 297 -GYLTPSVAFPATQIHQMGALNINSLPPTPMTPVSGLSSPPANITTSAVPSI-----VTP 350
Query: 304 YPGGMLG--HRPLNNSPG-------------SVSPAVANS--NPSTSSSGGTGPPGANLF 346
G G H+P N P + SP A++ T TGP G NLF
Sbjct: 351 IVNGFTGIPHQP-NGHPAVETMYTNGLPPYSTQSPTAADTLQQAFTGVQQYTGPEGCNLF 409
Query: 347 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 406
IYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG
Sbjct: 410 IYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNG 469
Query: 407 CQLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR ++PY
Sbjct: 470 FQIGMKRLKVQLKRPKDASRPY 491
>gi|28574145|ref|NP_788039.1| bruno-2, isoform D [Drosophila melanogaster]
gi|442627591|ref|NP_001260410.1| bruno-2, isoform K [Drosophila melanogaster]
gi|28380348|gb|AAO41184.1| bruno-2, isoform D [Drosophila melanogaster]
gi|440213740|gb|AGB92945.1| bruno-2, isoform K [Drosophila melanogaster]
Length = 737
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/456 (39%), Positives = 251/456 (55%), Gaps = 51/456 (11%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
Q+ + N P+ A + P++ A + APP G + + S +P +Q Q
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG---RTNPSMAAALAAVPQVQ-Q 527
Query: 249 PGFHGIIP----PVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS-------------- 290
G P P+N A+ S L+ N+ N A + +
Sbjct: 528 AGSAATAPTTLVPLNSTTAL---SASLTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQL 584
Query: 291 -----GYPAVPGLQYP------MPYPGGMLGHRPLNNSP--GSVSPAVANSNPSTSSSGG 337
GY P P PY + G L N G+ S V S +++G
Sbjct: 585 YQQLHGYGLSPAHYLPGPPNAADPYSSSLSG---LTNGAAYGAASQPVTTSALQAAAAGV 641
Query: 338 TG-----PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 392
TG P G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY+
Sbjct: 642 TGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYD 701
Query: 393 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 702 NPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 737
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
>gi|432853509|ref|XP_004067742.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 2 [Oryzias
latipes]
Length = 489
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 176/443 (39%), Positives = 245/443 (55%), Gaps = 53/443 (11%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 74 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 133
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 134 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 193
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 194 CTVLRGPDGNSKGCAFVKFSAHTEAQSAIGALHGSQTMPGASSSLVVKFADTDKERTIRR 253
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q FG A P++ Y +S ++ LMQ + M G
Sbjct: 254 MQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQQQAAIMAASHG- 295
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFV---GSGYP------AVPGLQYP 301
G + P A + MGP N ++PP+ G P AVP + P
Sbjct: 296 -GYLTPSVAFPATQ------IHQMGPLNINSLPPTPMTPVSGDSPPANITTSAVPSIVTP 348
Query: 302 MPYPGGMLGHRPLNNSPGSVSPAVANSNP--STSSSGG--------------TGPPGANL 345
+ + H+P N P +V N P ST S TGP G NL
Sbjct: 349 IVNGFTGIPHQP-NGHP-AVETVYTNGLPPYSTQSPNAADTLQQAFTGVQQYTGPEGCNL 406
Query: 346 FIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMN 405
FIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MN
Sbjct: 407 FIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMN 466
Query: 406 GCQLGGKKLKVQLKRDNKQNKPY 428
G Q+G K+LKVQLKR ++PY
Sbjct: 467 GFQIGMKRLKVQLKRPKDASRPY 489
>gi|301776386|ref|XP_002923617.1| PREDICTED: CUGBP Elav-like family member 5-like [Ailuropoda
melanoleuca]
Length = 418
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 181/436 (41%), Positives = 242/436 (55%), Gaps = 42/436 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 65 QTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 125 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ Q L PSL LP PY+ Y + LMQ + + +
Sbjct: 185 QQMVGQLGIL------TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY- 226
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM------- 302
+ P V +S N P P SG G AVPGL P+
Sbjct: 227 -LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGV 285
Query: 303 -PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSSGG-TGPPGANLFIYHIPQ 352
P+PG GH L + G V SP VA + +P+ S TGP G NLFIYH+PQ
Sbjct: 286 VPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTGPEGCNLFIYHLPQ 342
Query: 353 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 412
EFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K
Sbjct: 343 EFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMK 402
Query: 413 KLKVQLKRDNKQNKPY 428
+LKVQLKR PY
Sbjct: 403 RLKVQLKRPKDPGHPY 418
>gi|338725075|ref|XP_003365078.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 3 [Equus
caballus]
gi|426331469|ref|XP_004026703.1| PREDICTED: CUGBP Elav-like family member 3 isoform 4 [Gorilla
gorilla gorilla]
gi|355758212|gb|EHH61449.1| hypothetical protein EGM_19912 [Macaca fascicularis]
Length = 419
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 170/431 (39%), Positives = 231/431 (53%), Gaps = 31/431 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGA--SPDLSSNMGPRNYAMP----PSGFVGSGYPAVPGLQYPMPYPG 306
N + +P ++ P A P P+ +GY VP P P
Sbjct: 237 MQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPD 296
Query: 307 GMLGHRPLNNSPGSVSPAVANS-----NPSTSSSGG----TGPPGANLFIYHIPQEFGDQ 357
+ P V P A S +P + G TGP G N+FIYH+PQEF D
Sbjct: 297 ALY--------PNGVHPYPAQSPAAPVDPLQQAYAGMQHYTGPDGCNIFIYHLPQEFTDS 348
Query: 358 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 417
E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQ
Sbjct: 349 EILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQ 408
Query: 418 LKRDNKQNKPY 428
LKR N+PY
Sbjct: 409 LKRPKDANRPY 419
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|431896648|gb|ELK06060.1| CUG-BP- and ETR-3-like factor 3 [Pteropus alecto]
Length = 419
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 170/431 (39%), Positives = 232/431 (53%), Gaps = 31/431 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGA--SPDLSSNMGPRNYAMP----PSGFVGSGYPAVPGLQYPMPYPG 306
N + +P ++ P A P P+ +GY VP P P
Sbjct: 237 MQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPAGQPAPD 296
Query: 307 GMLGHRPLNNSPGSVSPAVANS-----NPSTSSSGG----TGPPGANLFIYHIPQEFGDQ 357
+ P V P A S +P + G TGP G N+FIYH+PQEF D
Sbjct: 297 ALY--------PNGVHPYPAQSPAAPVDPLQQAYAGMQHYTGPDGCNIFIYHLPQEFTDS 348
Query: 358 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 417
E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQ
Sbjct: 349 EVLQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQ 408
Query: 418 LKRDNKQNKPY 428
LKR N+PY
Sbjct: 409 LKRPKDANRPY 419
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARESALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|348526888|ref|XP_003450951.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2
[Oreochromis niloticus]
Length = 405
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/425 (39%), Positives = 242/425 (56%), Gaps = 33/425 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K S+ +V LF +G+I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRRLFEPFGSIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ SQ +F + + + P YN Y + L+Q + + Q +
Sbjct: 185 QQVASQLG-----------IFSPMTLNF-PAYNAY------TQALVQQQ--ALVAQSAYL 224
Query: 253 GIIPPVN----QGNAMRGASPDLSSNMGPR--NYAMPPSGFVGSGYPAVPGLQ-YPMPYP 305
+ V Q A A+ +++ + P + A P+ + A G+Q Y YP
Sbjct: 225 SPVATVAAVQMQQMAALNANGIIATPITPITPSSAQSPAAALDPLQQAYAGMQHYTAAYP 284
Query: 306 G--GMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAF 363
G++G +P P V+ GP G N+FIYH+PQEF D E+ F
Sbjct: 285 AAYGLVG-QPFPQQPTLVAQQHQQPQQQQQRE---GPEGCNIFIYHLPQEFSDSEMLQMF 340
Query: 364 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 423
FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 341 LPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKD 400
Query: 424 QNKPY 428
N+PY
Sbjct: 401 ANRPY 405
>gi|147902406|ref|NP_001090639.1| CUGBP Elav-like family member 5 [Xenopus (Silurana) tropicalis]
gi|152013396|sp|A0JM51.1|CELF5_XENTR RecName: Full=CUGBP Elav-like family member 5; Short=CELF-5;
AltName: Full=Bruno-like protein 5; AltName:
Full=CUG-BP- and ETR-3-like factor 5; AltName:
Full=RNA-binding protein BRUNOL-5
gi|117558445|gb|AAI25740.1| brunol5 protein [Xenopus (Silurana) tropicalis]
Length = 486
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 245/466 (52%), Gaps = 74/466 (15%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 45 DAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKA 104
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE EV+++F +G+I++
Sbjct: 105 QTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEEC 164
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA++A++G M G+S LVVK+ADT+KER RR
Sbjct: 165 SVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRM 224
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG------------------------ 228
Q+ Q PSL ALP+ PY+ Y
Sbjct: 225 QQMVGQLGIF------TPSL--ALPIS---PYSAYAQALMQQQTTVLSTSHGSYLSPSVA 273
Query: 229 -----YQASGSYGLMQYRLPPMQNQPGFH-----------GIIPPVNQGNAMRGASPDLS 272
Q G+ L P+ G H G++ P+ N G P S
Sbjct: 274 FPSCHIQQIGAVNLNGLPAAPITPASGLHSPPVIGTAAVPGLVAPLT--NGFPGLVPFPS 331
Query: 273 SNMGPRNY---------AMPPSGFVGSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGSVS 322
S+ A P+ V S +P+ G+ QY YP L P+ +S
Sbjct: 332 SHPALDTIYTNSIVPYPAQSPALTVESLHPSFTGVQQYSAIYPTAAL--TPVTHSTPQPP 389
Query: 323 PAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 382
P + GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT
Sbjct: 390 PILQQRE---------GPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQ 440
Query: 383 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR +PY
Sbjct: 441 SKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDTTQPY 486
>gi|167521936|ref|XP_001745306.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776264|gb|EDQ89884.1| predicted protein [Monosiga brevicollis MX1]
Length = 389
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/413 (40%), Positives = 224/413 (54%), Gaps = 49/413 (11%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P++ +E L +F EF + EV I++D+ T S+GC F+ +RQ A A
Sbjct: 15 DAMKLFIGQIPRNYSEEDLTHIFSEFGHIYEVMILRDRQTHNSKGCAFLTFTTRQAAVDA 74
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ H K TLP S P+QVK AD + E KLF+GML + ++E ++ A F +G ++DL
Sbjct: 75 IERHHEKTTLPNMSHPMQVKIADTDQRNAERKLFVGMLARTMNEDDLRAKFGAFGHVEDL 134
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR + +SKGCAF+K+ ++A +A+ ++ M+G P+VVK AD EK++Q R+
Sbjct: 135 TILRHADGSSKGCAFVKFSNADEAQSAIANLHHSETMDGCRSPIVVKVADNEKQKQHRKL 194
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ Q NN M PYN S SY M NQ
Sbjct: 195 QR---QLNN----------------MNVMMPYNMIPNPRSMSYN--------MYNQAANF 227
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHR 312
G GN M +PD + MG + P G YP+ P P+ G +
Sbjct: 228 GQF-----GNGM--PAPDHGA-MGEVDGGASPVGGFNMPYPSNPYGMASAPF-----GQQ 274
Query: 313 PLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 372
P P + P SS GP G+NLFIYH+PQEF DQ L F FG V+SA
Sbjct: 275 PYMGQPMA---------PRQSSQQPEGPDGSNLFIYHLPQEFNDQALAATFLPFGNVISA 325
Query: 373 KVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 425
KVFVDK TG SKCFGFVSY++PASA+ AI MNG Q+G K+LKVQLKR N
Sbjct: 326 KVFVDKMTGQSKCFGFVSYDNPASAEAAITAMNGFQIGMKRLKVQLKRPKSAN 378
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LFI IP+ + +++L + F FG + + D+ T SK F+++ + +A +
Sbjct: 14 PDAMKLFIGQIPRNYSEEDLTHIFSEFGHIYEVMILRDRQTHNSKGCAFLTFTTRQAAVD 73
Query: 400 AI 401
AI
Sbjct: 74 AI 75
>gi|212286102|ref|NP_001131056.1| CUGBP, Elav-like family member 5 [Xenopus laevis]
gi|197359138|gb|ACH69785.1| RNA binding protein Bruno-like 5 [Xenopus laevis]
Length = 484
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/467 (37%), Positives = 246/467 (52%), Gaps = 77/467 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 44 DAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKA 103
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE EV+++F +G+I++
Sbjct: 104 QTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEEC 163
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA++A++G M G+S LVVK+ADT+KER RR
Sbjct: 164 SVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRM 223
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG------------------------ 228
Q+ Q PSL ALP+ PY+ Y
Sbjct: 224 QQMVGQLGIF------TPSL--ALPIS---PYSAYAQALMQQQTTVLSTSHGSYLSPSVA 272
Query: 229 -----YQASGSYGLMQYRLPPMQNQPGFH-----------GIIPPVNQGNAMRGASPDLS 272
Q G+ L P+ G H G++ P+ N G P S
Sbjct: 273 FPSCHIQQIGAVNLNGLPAAPITPASGLHSPPVIGTAAVPGLVAPLT--NGFPGLVPFPS 330
Query: 273 SN----------MGPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGSV 321
S+ + P P + V S +P+ G+ QY YP L P+ +S
Sbjct: 331 SHPALDTIYTNSIVPYPAQSPLT--VESLHPSFTGVQQYSAIYPTATL--TPVTHSTPQP 386
Query: 322 SPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 381
P + GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT
Sbjct: 387 PPILQQRE---------GPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATN 437
Query: 382 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR +PY
Sbjct: 438 QSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDTTQPY 484
>gi|289547605|ref|NP_001166120.1| CUGBP Elav-like family member 3 isoform 3 [Homo sapiens]
gi|338725073|ref|XP_003365077.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 2 [Equus
caballus]
gi|119573807|gb|EAW53422.1| trinucleotide repeat containing 4, isoform CRA_d [Homo sapiens]
Length = 415
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 166/428 (38%), Positives = 227/428 (53%), Gaps = 29/428 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF- 251
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 252 ---------HGII-PPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYP 301
+G+I P+ +A A+P + P A + YPA L P
Sbjct: 237 MQHMAAINANGLIATPITPSSAQSPAAP-----VDPLQQAYAGMQHYTAAYPAAYSLVAP 291
Query: 302 -MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELG 360
P P ++ P GP G N+FIYH+PQEF D E+
Sbjct: 292 AFPQPPALVA----QQPPPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEIL 347
Query: 361 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 348 QMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 407
Query: 421 DNKQNKPY 428
N+PY
Sbjct: 408 PKDANRPY 415
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|350583383|ref|XP_003481500.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 2 [Sus scrofa]
gi|397492760|ref|XP_003817288.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Pan paniscus]
gi|426331465|ref|XP_004026701.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Gorilla
gorilla gorilla]
Length = 414
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 166/428 (38%), Positives = 227/428 (53%), Gaps = 30/428 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF- 251
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 252 ---------HGII-PPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYP 301
+G+I P+ +A A+P + P A + YPA L P
Sbjct: 237 MQHMAAINANGLIATPITPSSAQSPAAP-----VDPLQQAYAGMQHYTAAYPAAYSLVAP 291
Query: 302 -MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELG 360
P P ++ P GP G N+FIYH+PQEF D E+
Sbjct: 292 AFPQPPALVA-----QQPPPPPQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEIL 346
Query: 361 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 347 QMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 406
Query: 421 DNKQNKPY 428
N+PY
Sbjct: 407 PKDANRPY 414
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|348586640|ref|XP_003479076.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2 [Cavia
porcellus]
gi|410968368|ref|XP_003990679.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Felis catus]
Length = 413
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 166/428 (38%), Positives = 227/428 (53%), Gaps = 31/428 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF- 251
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 252 ---------HGII-PPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYP 301
+G+I P+ +A A+P + P A + YPA L P
Sbjct: 237 MQHMAAINANGLIATPITPSSAQSPAAP-----VDPLQQAYAGMQHYTAAYPAAYSLVAP 291
Query: 302 -MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELG 360
P P ++ P GP G N+FIYH+PQEF D E+
Sbjct: 292 AFPQPPALVA------QQPPPPPQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEIL 345
Query: 361 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 346 QMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 405
Query: 421 DNKQNKPY 428
N+PY
Sbjct: 406 PKDANRPY 413
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|359321741|ref|XP_003639690.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2 [Canis
lupus familiaris]
Length = 412
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 166/428 (38%), Positives = 228/428 (53%), Gaps = 32/428 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF- 251
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 252 ---------HGII-PPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYP 301
+G+I P+ +A A+P + P A + YPA L P
Sbjct: 237 MQHMAAINANGLIATPITPSSAQSPAAP-----VDPLQQAYAGMQHYTAAYPAAYSLVAP 291
Query: 302 -MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELG 360
P P ++ + P GP G N+FIYH+PQEF D E+
Sbjct: 292 AFPQPPALV-------AQQPPPPPQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEIL 344
Query: 361 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 345 QMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 404
Query: 421 DNKQNKPY 428
N+PY
Sbjct: 405 PKDANRPY 412
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|410033642|ref|XP_524868.3| PREDICTED: CUGBP, Elav-like family member 3 isoform 3 [Pan
troglodytes]
Length = 414
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 166/428 (38%), Positives = 227/428 (53%), Gaps = 30/428 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF- 251
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALEAAHSAYLSPMATMAAVQ 236
Query: 252 ---------HGII-PPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYP 301
+G+I P+ +A A+P + P A + YPA L P
Sbjct: 237 MQHMAAINANGLIATPITPSSAQSPAAP-----VDPLQQAYAGMQHYTAAYPAAYSLVAP 291
Query: 302 -MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELG 360
P P ++ P GP G N+FIYH+PQEF D E+
Sbjct: 292 AFPQPPALVA-----QQPPPPPQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEIL 346
Query: 361 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 347 QMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 406
Query: 421 DNKQNKPY 428
N+PY
Sbjct: 407 PKDANRPY 414
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|395535953|ref|XP_003769985.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Sarcophilus
harrisii]
Length = 408
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 166/419 (39%), Positives = 228/419 (54%), Gaps = 18/419 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLNPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGH 311
Q A A+ +++ + P + A P+ V A G+Q Y YP
Sbjct: 237 ------MQHMAAINANGLIATPITPSS-AQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLV 289
Query: 312 RPLNNSPGSVSPAVANSNPSTSSSGGT--GPPGANLFIYHIPQEFGDQELGNAFQAFGRV 369
P P ++ P GP G N+FIYH+PQEF D E+ F FG V
Sbjct: 290 TPAFPQPPALVTQQPPPPPQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHV 349
Query: 370 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 350 ISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 408
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +N+
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|334324674|ref|XP_003340553.1| PREDICTED: CUGBP, Elav-like family member 3 [Monodelphis domestica]
Length = 408
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 166/419 (39%), Positives = 228/419 (54%), Gaps = 18/419 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLNPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGH 311
Q A A+ +++ + P + A P+ V A G+Q Y YP
Sbjct: 237 ------MQHMAAINANGLIATPITPSS-AQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLV 289
Query: 312 RPLNNSPGSVSPAVANSNPSTSSSGGT--GPPGANLFIYHIPQEFGDQELGNAFQAFGRV 369
P P ++ P GP G N+FIYH+PQEF D E+ F FG V
Sbjct: 290 TPAFPQPPALVAQQPPPPPQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHV 349
Query: 370 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 350 ISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 408
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +N+
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|344275414|ref|XP_003409507.1| PREDICTED: CUGBP Elav-like family member 3 [Loxodonta africana]
Length = 420
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 226/430 (52%), Gaps = 28/430 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF- 251
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 252 ---------HGII-PPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGL--- 298
+G+I P+ +A A+P + P A + YPA L
Sbjct: 237 MQHMAAINANGLIATPITPSSAQSPAAP-----VDPLQQAYAGMQHYTAAYPAAYSLVAP 291
Query: 299 QYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQE 358
+P P P + GP G N+FIYH+PQEF D E
Sbjct: 292 AFPQP-PALVAQQPAPPPQQQQQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSE 350
Query: 359 LGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 418
+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQL
Sbjct: 351 ILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQL 410
Query: 419 KRDNKQNKPY 428
KR N+PY
Sbjct: 411 KRPKDANRPY 420
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|444515071|gb|ELV10733.1| CUGBP Elav-like family member 3 [Tupaia chinensis]
Length = 431
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/443 (38%), Positives = 230/443 (51%), Gaps = 43/443 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ +Q Q FGA Y+ Q + L PM
Sbjct: 185 QQVATQLGMFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQ 236
Query: 253 GIIPPVNQGNAMRGA--SPDLSSNMGPRNYAMP----PSGFVGSGYPAVPGLQYPMPYPG 306
N + +P ++ P A P P+ +GY VP P P
Sbjct: 237 MQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPD 296
Query: 307 GMLGHRPLNNSPGSVSPAVANS-----NPSTSSSGGT----------------GPPGANL 345
+ P V P A S +P + G GP G N+
Sbjct: 297 ALY--------PNGVHPYPAQSPAAPVDPLQQAYAGMQHYTVTERFLCLCFHPGPDGCNI 348
Query: 346 FIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMN 405
FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MN
Sbjct: 349 FIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMN 408
Query: 406 GCQLGGKKLKVQLKRDNKQNKPY 428
G Q+G K+LKVQLKR N+PY
Sbjct: 409 GFQIGMKRLKVQLKRPKDANRPY 431
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|432852724|ref|XP_004067353.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 3
[Oryzias latipes]
Length = 454
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/440 (37%), Positives = 234/440 (53%), Gaps = 45/440 (10%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R + Q ++P +G + S+ +MQ + M G
Sbjct: 218 RMHQMAGQLGI------------------FSPMTIQFGAYGTYSHAMMQQQAALMAATQG 259
Query: 251 FHGIIPPVNQGNAMRGASPDLSSN------MGPRNYAMPPSGFVGSGYPAVPGLQYPMPY 304
+ + P A + N M P + P G + AVP + P+
Sbjct: 260 SY-LNPMAAIAAAQMQQMAAFNVNGLVATPMTPSSGTSTPPGISAT---AVPSIATPIGV 315
Query: 305 PGGMLGHRPLNNSPGSVSPAVAN------------SNPSTSSSGGT----GPPGANLFIY 348
G P N + P N ++P + G GP G NLFIY
Sbjct: 316 -NGFSALPPQTNGQPTSEPIYTNGIHPYPAQSPTVTDPLQQAYAGVQHYAGPEGCNLFIY 374
Query: 349 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 408
H+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ AI MNG Q
Sbjct: 375 HLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQAAIQAMNGFQ 434
Query: 409 LGGKKLKVQLKRDNKQNKPY 428
+G K+LKVQLKR N+PY
Sbjct: 435 IGMKRLKVQLKRPKDANRPY 454
>gi|66269433|gb|AAY43161.1| napor protein isoform [Danio rerio]
Length = 483
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 243/445 (54%), Gaps = 50/445 (11%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 60 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 119
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 120 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 179
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 180 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 239
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR------- 241
RR Q+ +Q N+ S SL G G P Y QA+ S L +
Sbjct: 240 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNLGAFSGIQQMAA 297
Query: 242 ------------LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
L + G G +N NA+ G + L+ +G + +G +
Sbjct: 298 GSTANSSAAMGSLGSLGTLQGLAGATVGLNNINALAGMAA-LNGGLGSTGLSNGSAGPMD 356
Query: 290 SGYPAVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGA 343
+ A G+Q P Y +L + S + S GP GA
Sbjct: 357 ALTQAYSGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGA 398
Query: 344 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 403
NLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI
Sbjct: 399 NLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQA 458
Query: 404 MNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 MNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 140 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 198
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 199 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 238
>gi|390468527|ref|XP_003733960.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Callithrix
jacchus]
Length = 454
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 236/437 (54%), Gaps = 43/437 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGCIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQDEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ Q HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACSAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG +PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGTLPGL----PTPIGING 317
Query: 311 HRPL----NNSPGS-------VSPAVANS----NPSTSSSGG----TGPPGANLFIYHIP 351
PL N PGS +SP A S +P + G GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYAGMHHYAGPEGCNLFIYHLP 377
Query: 352 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 411
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 412 KKLKVQLKRDNKQNKPY 428
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|363742941|ref|XP_428898.3| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Gallus
gallus]
Length = 401
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 237/430 (55%), Gaps = 47/430 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
Q+ SQ Q FGA Y+ Y + LMQ + + +
Sbjct: 185 QQVASQLGMFSPIALQ----FGA--------YSAY------TQALMQQQAALVAAHSAYL 226
Query: 253 GIIPPVN-QGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP------GLQ-YPMPY 304
+ + Q M +P+ G +PPS PA P G+Q Y Y
Sbjct: 227 SPMATMAVQMQHMGTVNPN-----GLIATPLPPSSAQSPAAPADPLQQAYAGMQHYTAAY 281
Query: 305 PGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQE 358
P G VSPA A P + GP G N+FIYH+PQEF D E
Sbjct: 282 PAAY----------GLVSPAFAPPGPLLAPPPPPQQQQREGPEGCNIFIYHLPQEFADTE 331
Query: 359 LGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 418
+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQL
Sbjct: 332 ILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIHAMNGFQIGMKRLKVQL 391
Query: 419 KRDNKQNKPY 428
KR N+PY
Sbjct: 392 KRPKDANRPY 401
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K + + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+ A H +TLPGASS L VK+AD E ER
Sbjct: 144 SHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|395501660|ref|XP_003755209.1| PREDICTED: CUGBP Elav-like family member 4-like [Sarcophilus
harrisii]
Length = 399
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 168/420 (40%), Positives = 223/420 (53%), Gaps = 40/420 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 18 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 77
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 78 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 137
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 138 ECTILRGPDGTSKGCAFVKFGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTLR 197
Query: 191 RAQKAQSQANNLPNADSQHPSL--FGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
R + Q HP FGA + Y + G L PM
Sbjct: 198 RMHQMAGQLGIF------HPMTVQFGACGV-YTQAIMQQQAALMAAQGTC---LNPMA-- 245
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGM 308
II N + +R SP S + PP+ F
Sbjct: 246 ----AIIETRNDPSVLR--SPKQKSGESRGRSSQPPTSFP-------------------- 279
Query: 309 LGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGR 368
L + V+ A P GP G NLFIYH+PQEFGD EL F FG
Sbjct: 280 LSPAAYPAAYAPVNTAFPPQPPILPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGT 339
Query: 369 VLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 340 VISAKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 399
>gi|196012894|ref|XP_002116309.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
gi|190581264|gb|EDV21342.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
Length = 456
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 166/441 (37%), Positives = 238/441 (53%), Gaps = 57/441 (12%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLFVGQ+P+ TE L ++F +F + E+ +IKD+TT+ +GC FV + A+
Sbjct: 32 KDAIKLFVGQLPRDCTEEDLHSLFDQFGPIYELAVIKDRTTKQHKGCAFVTYCKKSSAEA 91
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A +A H KK L G P+QVK AD E R E KLF+GML K E E+ ++FS YG+I++
Sbjct: 92 AQSAFHEKKVLSGMPRPMQVKPADCE-NREERKLFVGMLGKLDDENELKSMFSPYGSIEE 150
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ILR +SKGC F+K+ TK +A A++ ++G M G+S LVVK+ADTEK++ R+
Sbjct: 151 VTILRAIDGSSKGCGFVKFSTKSEAQVAIQNLHGSRNMPGASHQLVVKFADTEKDKYIRK 210
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPP------- 244
QK NA + H FG YAP YN YG SYG Q+ L P
Sbjct: 211 MQK---------NASNNHIVNFGRQYASYAPQYNNYG-----SYG--QFALQPAMQQQNN 254
Query: 245 -----------MQNQPGFHGIIPPVNQGNAMRGASPDLS------SNMGPRNYAMPPSGF 287
M H + + N+ + P S + N +G
Sbjct: 255 SNQNYGVHVGLMGQYTANHRLNAGSHSHNSTSMSHPQTSVTFPATTTQNNSNVVTGSAGA 314
Query: 288 VGSGYPA--------VPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 339
VG G+P V +Q P + + P N++ SVS +++ S G
Sbjct: 315 VGYGFPGYQININGLVDQIQSPYSVKYLIAQYAPFNHNAASVS--------ASTVSPKEG 366
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P G NLFIYH+P EF D +L N F +G V+SAKV+++K T SKCFGFVSY++ +SA +
Sbjct: 367 PAGCNLFIYHLPPEFTDYDLHNIFAPYGNVVSAKVYINKITKQSKCFGFVSYDNASSAHH 426
Query: 400 AIAMMNGCQLGGKKLKVQLKR 420
AI+ +NG + GKKLKV+ K+
Sbjct: 427 AISTLNGMMVYGKKLKVEYKK 447
>gi|66269429|gb|AAY43159.1| napor protein short isoform [Danio rerio]
Length = 473
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 243/449 (54%), Gaps = 54/449 (12%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 226 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL----------- 272
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS-----GYPAVPGLQYPMP 303
G + Q A G++ + S+ MG G G+ A+ G M
Sbjct: 273 ----GAFSGIQQMAA--GSTANSSAAMGSLGSLGTLQGLAGATVGLNNINALAGSVNSMA 326
Query: 304 YPGGMLGHRPLNNSPGSVSPAVANSNP------------------------STSSSGGTG 339
G LG L+N GS P A + S + S G
Sbjct: 327 ALNGGLGSTGLSN--GSAGPMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEG 384
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 385 PEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQA 444
Query: 400 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 445 AIQAMNGFQIGMKRLKVQLKRSKNDSKPY 473
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 224
>gi|60729622|pir||JC7967 Napor protein - zebra fish
gi|14030309|gb|AAK52851.1|AF321194_1 Napor [Danio rerio]
Length = 441
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 243/449 (54%), Gaps = 54/449 (12%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 194 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL----------- 240
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS-----GYPAVPGLQYPMP 303
G + Q A G++ + S+ MG G G+ A+ G M
Sbjct: 241 ----GAFSGIQQMAA--GSTANSSAAMGSLGSLGTLQGLAGATVGLNNINALAGSVNSMA 294
Query: 304 YPGGMLGHRPLNNSPGSVSPAVANSNP------------------------STSSSGGTG 339
G LG L+N GS P A + S + S G
Sbjct: 295 ALNGGLGSTGLSN--GSAGPMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEG 352
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 353 PEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQA 412
Query: 400 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 413 AIQAMNGFQIGMKRLKVQLKRSKNDSKPY 441
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 192
>gi|606976|gb|AAA81375.1| ribonucleoprotein [Xenopus laevis]
Length = 462
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 247/478 (51%), Gaps = 82/478 (17%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR----------L 242
Q+ AN L +F + + + Y+ Y S LMQ + L
Sbjct: 185 QQV---ANQL--------GMFSPIALQFG-AYSAYTQAVSDQ--LMQQQAALVAAHSAYL 230
Query: 243 PPMQNQPGF----------HGII-PPVNQGNAMRGAS-----PDLSSNMGPRNYAMPPSG 286
PM +GII P+ Q N + +S P L++ + P+
Sbjct: 231 NPMATMAAVQMQQMATINPNGIIATPITQINPITSSSGTSTPPTLTAT----QVSAIPAT 286
Query: 287 FVGSGYPAVP---------------GLQ-YPMPYPGGMLGHRPLNN-------------- 316
+GY AVP GL YP P L PL
Sbjct: 287 LGVNGYSAVPTQSTVQPSSEAIYTNGLHPYPAQSPVAQLD--PLQQAYAGMQHYTAAYPA 344
Query: 317 SPGSVSPAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 370
+ G VSPA GP G N+FIYH+PQEF D E+ F FG V+
Sbjct: 345 AYGLVSPAFTQPPAIIQQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVI 404
Query: 371 SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 405 SAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|402874765|ref|XP_003901198.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Papio anubis]
Length = 454
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 236/437 (54%), Gaps = 43/437 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ Q HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG +PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGTLPGL----PAPIGVNG 317
Query: 311 HRPL----NNSPGS-------VSPAVANS----NPSTSSSGG----TGPPGANLFIYHIP 351
PL N PGS +SP A S +P + G GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYAGMHHYAGPEGCNLFIYHLP 377
Query: 352 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 411
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 412 KKLKVQLKRDNKQNKPY 428
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|156352255|ref|XP_001622676.1| predicted protein [Nematostella vectensis]
gi|156209270|gb|EDO30576.1| predicted protein [Nematostella vectensis]
Length = 455
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 229/453 (50%), Gaps = 56/453 (12%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ E L +F+ + + E+ I+KDK T +GC F+ SR + A
Sbjct: 20 VKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKGCAFLTFCSRDACNAAQK 79
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
H KKTLPG P+QVK AD E + + KLF+GM+ K+ E ++ +FS +GTI++L +
Sbjct: 80 HLHEKKTLPGMHHPIQVKPADSETKSDDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 139
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LR + TSKGCAF+K+ + QA A+ ++ MEG S PLVVK+ADTEKE+ ++
Sbjct: 140 LRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTMEGCSSPLVVKFADTEKEKLQKKM-- 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGI 254
QH + FG + G A P Y + S + P + PG G
Sbjct: 198 -------------QHLAAFGGMAFGGASPGFPLAYNPALSQQVKLAYNPALSQHPGGLGA 244
Query: 255 IPPVN--------------QGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQY 300
+ Q N G S ++S + P G G + G+
Sbjct: 245 LVAATVMAQQQQQQQGNAIQNNMTSGTSGIMTSTVNTSQSNASPMGLGVQGVAGMGGMGM 304
Query: 301 PMPYPGGMLGHRPLNNSPGSVS----------------PAVANS--------NPSTSSSG 336
G G + N+ S+ P V N P S
Sbjct: 305 ANMASLG--GVNSIGNTVPSMDTISQAYSGIQPYSAAFPTVYNQALYQQTARQPQKEESH 362
Query: 337 GT-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 395
T GP G+NLFIYH+PQEF D +L FQ FG V+SAKVF+DK T +SKCFGFVSY++
Sbjct: 363 YTPGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVM 422
Query: 396 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SAQNAI MNG Q+G K+LKVQLKR N+PY
Sbjct: 423 SAQNAIQHMNGFQIGAKRLKVQLKRPKDANRPY 455
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S++R KLFVG + KH E L MF F ++E+ ++++ + S+GC F+ +R +A
Sbjct: 105 SDDR-KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADS-TSKGCAFIKFANRMQAQ 162
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ HN T+ G SSPL VK+AD E E+L+ K+
Sbjct: 163 NAIATMHNSTTMEGCSSPLVVKFADTEKEKLQKKM 197
>gi|147907254|ref|NP_001079936.1| CUGBP Elav-like family member 3-A [Xenopus laevis]
gi|152013388|sp|Q91579.2|CEL3A_XENLA RecName: Full=CUGBP Elav-like family member 3-A; Short=CELF-3A;
AltName: Full=Bruno-like protein 1-A; AltName:
Full=CUG-BP- and ETR-3-like factor 3-A; AltName:
Full=ELAV-type RNA-binding protein 1-A; Short=ETR-1-A;
AltName: Full=RNA-binding protein BRUNOL-1-A; AltName:
Full=Trinucleotide repeat-containing gene 4 protein A
gi|34785486|gb|AAH57704.1| Etr-1 protein [Xenopus laevis]
gi|47937574|gb|AAH72134.1| Etr-1 protein [Xenopus laevis]
Length = 462
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 247/478 (51%), Gaps = 82/478 (17%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR----------L 242
Q+ AN L +F + + + Y+ Y S LMQ + L
Sbjct: 185 QQV---ANQL--------GMFSPIALQFG-AYSAYTQAVSDQ--LMQQQAALVAAHSAYL 230
Query: 243 PPMQNQPGF----------HGII-PPVNQGNAMRGAS-----PDLSSNMGPRNYAMPPSG 286
PM +GII P+ Q N + +S P L++ + P+
Sbjct: 231 NPMATMAAVQMQQMATINPNGIIATPITQINPITSSSGTSTPPTLTAT----QVSAIPAT 286
Query: 287 FVGSGYPAVP---------------GLQ-YPMPYPGGMLGHRPLNN-------------- 316
+GY AVP GL YP P L PL
Sbjct: 287 LGVNGYSAVPTQSTVQPSSEAIYTNGLHPYPAQSPVAQLD--PLQQAYAGMQHYTAAYPA 344
Query: 317 SPGSVSPAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 370
+ G VSPA GP G N+FIYH+PQEF D E+ F FG V+
Sbjct: 345 AYGLVSPAFTQPPAILQQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVI 404
Query: 371 SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 405 SAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|432908655|ref|XP_004077968.1| PREDICTED: CUGBP Elav-like family member 3-like [Oryzias latipes]
Length = 457
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 179/474 (37%), Positives = 249/474 (52%), Gaps = 79/474 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V LF +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQTDEDVRRLFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR--------LPP 244
Q+ SQ +F + + + P YN Y + L+Q++ L P
Sbjct: 185 QQVASQLG-----------IFSPMTLNF-PAYNAYTQAVNAQ--LVQHQALVAQSAYLSP 230
Query: 245 --------MQNQPGF--HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP----PSGFVGS 290
MQ +GII + +P +N P A P P +
Sbjct: 231 VATVAAVQMQQMAALNANGII-----ATPITPITPSSGTNTPPAIAATPVPALPPPIGMN 285
Query: 291 GYPAVP----GLQYPMPYPGGMLGHRPLNNSPGSVSP---AVANSNPST----SSSGGTG 339
GY +VP G Q Y G+ H+ SP ++ P A A T ++ G G
Sbjct: 286 GYSSVPAPTNGQQTETLYTNGV--HQYQAQSPAALDPLQQAYAGMQHYTAAYPAAYGLVG 343
Query: 340 PP-------------------------GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKV 374
P G N+FIYH+PQEF D E+ F FG V+SAKV
Sbjct: 344 QPFPQQQTLVAQQHQQPQQQQQREGPEGCNIFIYHLPQEFSDSEMLQMFLPFGNVISAKV 403
Query: 375 FVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 404 FVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 457
>gi|24762232|ref|NP_068757.2| CUGBP Elav-like family member 5 isoform 1 [Homo sapiens]
gi|402903694|ref|XP_003914695.1| PREDICTED: CUGBP Elav-like family member 5 [Papio anubis]
gi|74762534|sp|Q8N6W0.1|CELF5_HUMAN RecName: Full=CUGBP Elav-like family member 5; Short=CELF-5;
AltName: Full=Bruno-like protein 5; AltName:
Full=CUG-BP- and ETR-3-like factor 5; AltName:
Full=RNA-binding protein BRUNOL-5
gi|20380221|gb|AAH28101.1| Bruno-like 5, RNA binding protein (Drosophila) [Homo sapiens]
gi|119589733|gb|EAW69327.1| bruno-like 5, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|119589734|gb|EAW69328.1| bruno-like 5, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|123981490|gb|ABM82574.1| bruno-like 5, RNA binding protein (Drosophila) [synthetic
construct]
gi|123996323|gb|ABM85763.1| bruno-like 5, RNA binding protein (Drosophila) [synthetic
construct]
Length = 485
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 177/463 (38%), Positives = 237/463 (51%), Gaps = 67/463 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSY------ 235
Q+ Q L PSL LP PY+ Y SGSY
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVA 271
Query: 236 ---------------GLMQYRL--------PPMQNQPGFHGIIPPVNQGNA----MRGAS 268
GL + PP+ G++ P+ G A G
Sbjct: 272 FSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGGH 331
Query: 269 PDLSSNM--GPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGSVSPAV 325
P L + G Y + +PA G+ QY YP + P+ +S V
Sbjct: 332 PALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI--TPIAHS-------V 382
Query: 326 ANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 385
P GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKC
Sbjct: 383 PQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKC 442
Query: 386 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 443 FGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 485
>gi|332236064|ref|XP_003267225.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Nomascus
leucogenys]
Length = 454
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 236/437 (54%), Gaps = 43/437 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGHLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG A+PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGALPGL----PAPIGVNG 317
Query: 311 HRPL----NNSPGS-------VSPAVANS----NPSTSSSGG----TGPPGANLFIYHIP 351
PL N PGS +SP A S +P + G GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYAGMHHYAGPEGCNLFIYHLP 377
Query: 352 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 411
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 412 KKLKVQLKRDNKQNKPY 428
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|13537210|dbj|BAB40781.1| HrETR-1 [Halocynthia roretzi]
Length = 594
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 179/508 (35%), Positives = 257/508 (50%), Gaps = 90/508 (17%)
Query: 5 KKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICP 64
K+ + ++ VKLF+GQVPK+ TE +L +F+ + + E++++ DK T +GC F+
Sbjct: 93 KEFQDKDDDAVKLFIGQVPKNWTEHELRPIFEPYGEIYELSVLHDKYTGMHKGCAFLTYC 152
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFS 124
+ A A N H +KTLPG + P+QVK AD + + KLF+GML K +E ++ LF
Sbjct: 153 KKTPAINAQNFLHEQKTLPGMNHPMQVKPADTVNKGEDRKLFVGMLGKRQTEEDIRQLFE 212
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+G I++ ILR SKGC+F+K T A AA++A++G M G+S +VVK ADT+
Sbjct: 213 KFGHIEECTILRTPDGQSKGCSFVKLSTSTGARAAIDALHGSQTMPGASSSIVVKLADTD 272
Query: 185 KERQARRAQKAQSQ--------------ANNLPNADSQHPSLF---GALP--MGYAP--- 222
KER R+ Q+ + LP +QHP + G +P G++P
Sbjct: 273 KERAIRKMQQMAQNYGLVSPVTLQLGPYGSPLPQM-AQHPVMATTPGVMPAAAGWSPLAT 331
Query: 223 ----------------------PYNGYGYQASG----------SYGLMQYRLPPMQNQPG 250
NG+G Q +G S + PPM +Q G
Sbjct: 332 AFGTATQLGQMTNLGPASAIMQATNGHGAQIAGIPSTPQSPVASITTLNLVQPPMASQSG 391
Query: 251 FHGI--IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGY---------------P 293
I P+ R A+P +++ ++M PS V +G P
Sbjct: 392 MTTPQEIYPLQAYPGTRLAAPVVTT-----THSMTPSLAVHNGSSSDPSPMTLCASQTPP 446
Query: 294 AVPGLQ---YPMPY-----PGGMLGHRPLNNSPGSVSPAVANSNP-----STSSSGGTGP 340
+ +Q YP PY P G P +P ++P S ++ GP
Sbjct: 447 TMEMIQAPAYPQPYTVVYVPPGQYAPVPQQLTPTHLTPITTTQGAPALVNSPTAPQKEGP 506
Query: 341 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 400
G NLFIYH+PQEF D +L N FQ FG V+SAKVF+D+AT SKCFGFVSY++P SAQ A
Sbjct: 507 EGCNLFIYHLPQEFTDADLANVFQPFGNVISAKVFIDRATNQSKCFGFVSYDNPVSAQTA 566
Query: 401 IAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
I MNG Q+G K+LKVQLKR +Q++PY
Sbjct: 567 IQTMNGFQIGMKRLKVQLKRPKEQSRPY 594
>gi|158253638|gb|AAI54064.1| tnrc4 protein [Xenopus (Silurana) tropicalis]
Length = 462
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 179/477 (37%), Positives = 248/477 (51%), Gaps = 80/477 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR----------L 242
Q+ AN L +F + + + Y+ Y S LMQ + L
Sbjct: 185 QQV---ANQL--------GMFSPIALQFGA-YSAYTQAVSDQ--LMQQQAALVAAHSAYL 230
Query: 243 PPMQNQPGF----------HGII-PPVNQGNAMRGASPDLSSNMGPRNYAMP----PSGF 287
PM +GII P+ N + +S ++ P A P P+
Sbjct: 231 NPMATMAAVQMQQMATINPNGIIATPITPINPITSSS---GTSTPPTLAATPVSAIPATL 287
Query: 288 VGSGYPAVP---------------GLQ-YPMPYPGGMLGHRPLNN--------------- 316
+GY AVP GL YP P L PL
Sbjct: 288 GVNGYSAVPTQSTVQPSSEAIYTNGLHPYPAQSPVAQLD--PLQQAYAGMQHYTAAYPAA 345
Query: 317 ----SPG-SVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 371
SP + +PA+ P GP G N+FIYH+PQEF D E+ F FG V+S
Sbjct: 346 YGLVSPAFTQAPAILPQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVIS 405
Query: 372 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 406 AKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|426379619|ref|XP_004056489.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Gorilla
gorilla gorilla]
Length = 454
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 174/437 (39%), Positives = 235/437 (53%), Gaps = 43/437 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGHLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG +PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGTLPGL----PAPIGVNG 317
Query: 311 HRPL----NNSPGS-------VSPAVANS----NPSTSSSGG----TGPPGANLFIYHIP 351
PL N PGS +SP A S +P + G GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYAGMHHYAGPEGCNLFIYHLP 377
Query: 352 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 411
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 412 KKLKVQLKRDNKQNKPY 428
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|397495532|ref|XP_003818606.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Pan paniscus]
Length = 454
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 174/437 (39%), Positives = 235/437 (53%), Gaps = 43/437 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGHLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG +PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGTLPGL----PAPIGVNG 317
Query: 311 HRPL----NNSPGS-------VSPAVANS----NPSTSSSGG----TGPPGANLFIYHIP 351
PL N PGS +SP A S +P + G GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYTGMHHYAGPEGCNLFIYHLP 377
Query: 352 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 411
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 412 KKLKVQLKRDNKQNKPY 428
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|395831373|ref|XP_003788777.1| PREDICTED: CUGBP Elav-like family member 5 [Otolemur garnettii]
Length = 485
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 176/463 (38%), Positives = 237/463 (51%), Gaps = 67/463 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSY------ 235
Q+ Q L PSL LP PY+ Y SGSY
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVA 271
Query: 236 ---------------GLMQYRL--------PPMQNQPGFHGIIPPVNQGNA----MRGAS 268
GL + PP+ G++ P+ G A G
Sbjct: 272 FSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTAAVPGLVAPITNGFAGVVPFPGGH 331
Query: 269 PDLSSNM--GPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGSVSPAV 325
P L + G Y + +PA G+ QY YP + P+ +S V
Sbjct: 332 PALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI--TPIAHS-------V 382
Query: 326 ANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 385
P GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKC
Sbjct: 383 PQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKC 442
Query: 386 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 443 FGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 485
>gi|359322160|ref|XP_854891.3| PREDICTED: CUGBP, Elav-like family member 5 [Canis lupus
familiaris]
Length = 485
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 176/463 (38%), Positives = 237/463 (51%), Gaps = 67/463 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSY------ 235
Q+ Q L PSL LP PY+ Y SGSY
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVA 271
Query: 236 ---------------GLMQYRL--------PPMQNQPGFHGIIPPVNQGNA----MRGAS 268
GL + PP+ G++ P+ G A G
Sbjct: 272 FSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGGH 331
Query: 269 PDLSSNM--GPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGSVSPAV 325
P L + G Y + +PA G+ QY YP + P+ +S V
Sbjct: 332 PALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI--TPIAHS-------V 382
Query: 326 ANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 385
P GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKC
Sbjct: 383 PQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKC 442
Query: 386 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 443 FGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 485
>gi|289547741|ref|NP_001166155.1| CUGBP Elav-like family member 6 isoform 2 [Homo sapiens]
gi|194381648|dbj|BAG58778.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 174/437 (39%), Positives = 234/437 (53%), Gaps = 43/437 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGHLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+ Q + S + + PP GSG +PGL P P G+ G
Sbjct: 266 LGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP----GSGPGTLPGL----PAPIGVNG 317
Query: 311 HRPL----NNSPGS-------VSPAVANS----NPSTSSSGG----TGPPGANLFIYHIP 351
PL N PGS +SP A S +P + G GP G NLFIYH+P
Sbjct: 318 FGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYAGMHHYAGPEGCNLFIYHLP 377
Query: 352 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 411
QEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 378 QEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGM 437
Query: 412 KKLKVQLKRDNKQNKPY 428
K+LKVQLKR N+PY
Sbjct: 438 KRLKVQLKRPKDANRPY 454
>gi|354473520|ref|XP_003498983.1| PREDICTED: CUGBP Elav-like family member 6-like [Cricetulus
griseus]
Length = 551
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 172/449 (38%), Positives = 237/449 (52%), Gaps = 40/449 (8%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 112 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 171
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 172 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 231
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 232 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMSGASSSLVVKLADTDRERALR 291
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN---------GYGYQASGSYGLMQYR 241
R Q+ Q HP+ LP+G Y G +
Sbjct: 292 RMQQMAGQLGAF------HPT---PLPLGACGAYTTAILQHQAALLAAAQGPGLGQVAAV 342
Query: 242 LPPMQNQPGFHGIIPPV-------NQGNAMRGASPDLSSNMG--------PRNYAMPPSG 286
MQ+ F + P+ + G + GA P L + MG P+ P S
Sbjct: 343 AAQMQHVAAFSLVAAPLLPTAANTSPGGSGPGALPGLPAPMGVNGFGSLTPQTNGQPGSD 402
Query: 287 FVG----SGYPA-VPGLQYPM--PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 339
+ S YPA PG+ P+ Y G ++ VS A + + G
Sbjct: 403 TLYNNGLSPYPAQSPGVADPLQQAYAGIQHYAAAYPSAYAPVSTAFSQQPSALPQQQREG 462
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 463 PEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQT 522
Query: 400 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 523 AIQAMNGFQIGMKRLKVQLKRPKDANRPY 551
>gi|12746396|gb|AAK07476.1|AF329266_1 CUG-BP and ETR-3 like factor 5 [Homo sapiens]
Length = 481
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 175/455 (38%), Positives = 235/455 (51%), Gaps = 67/455 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSY------ 235
Q+ Q L PSL LP PY+ Y SGSY
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVA 271
Query: 236 ---------------GLMQYRL--------PPMQNQPGFHGIIPPVNQGNA----MRGAS 268
GL + PP+ G++ P+ G A G
Sbjct: 272 FSPCHIQQIGAVSLNGLPATPVAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGGH 331
Query: 269 PDLSSNM--GPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGSVSPAV 325
P L + G Y + +PA G+ QY YP + P+ +S V
Sbjct: 332 PALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI--TPIAHS-------V 382
Query: 326 ANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 385
P GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKC
Sbjct: 383 PQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKC 442
Query: 386 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
FGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 443 FGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 477
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 344 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 402
LF+ IP+ +++L F+ FGR+ V D TG+ K F++Y + SA A A
Sbjct: 46 KLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTA 105
Query: 403 MMNGCQLGGKKLKVQLKRDNKQNK 426
+ L G +Q+K + +++
Sbjct: 106 LHEQKTLPGMARPIQVKPADSESR 129
>gi|432853507|ref|XP_004067741.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 1 [Oryzias
latipes]
Length = 529
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 243/473 (51%), Gaps = 73/473 (15%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 74 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 133
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 134 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 193
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 194 CTVLRGPDGNSKGCAFVKFSAHTEAQSAIGALHGSQTMPGASSSLVVKFADTDKERTIRR 253
Query: 192 AQKAQSQ------ANNLPNAD---------SQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
Q+ Q A LP + Q ++ A GY P + G
Sbjct: 254 MQQMVGQFGIFNPAIALPFSTYSSYAHALMQQQAAIMAASHGGYLTPSVAFPATQIHQMG 313
Query: 237 LMQYR-LPPMQNQP---GFHGII-----PPVNQGNAMRGASPDLSSNMGPRNYAMPPSGF 287
+ LPP P FH + PP N ++++ P +GF
Sbjct: 314 PLNINSLPPTPMTPVSGEFHQTLAGLSSPPAN-----------ITTSAVPSIVTPIVNGF 362
Query: 288 VG-----SGYPAVPGL---------------------------QYPMPYPGGMLGHRPLN 315
G +G+PAV + QY YP L P++
Sbjct: 363 TGIPHQPNGHPAVETVYTNGLPPYSTQSPNAADTLQQAFTGVQQYTAIYPATTL--TPIS 420
Query: 316 NSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 375
+ +P V G G NLFIYH+PQEFGD EL F FG V+S+KVF
Sbjct: 421 QTLPQ-APQVIQQQQQQQREGPEG---CNLFIYHLPQEFGDNELMQMFLPFGTVISSKVF 476
Query: 376 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 477 MDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 529
>gi|358413030|ref|XP_610805.5| PREDICTED: CUGBP, Elav-like family member 5 [Bos taurus]
Length = 562
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 176/463 (38%), Positives = 237/463 (51%), Gaps = 67/463 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 120 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 179
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 180 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 240 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 299
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSY------ 235
Q+ Q L PSL LP PY+ Y SGSY
Sbjct: 300 MQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVA 348
Query: 236 ---------------GLMQYRL--------PPMQNQPGFHGIIPPVNQGNA----MRGAS 268
GL + PP+ G++ P+ G A G
Sbjct: 349 FSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTATVPGLVAPITNGFAGVVPFPGGH 408
Query: 269 PDLSSNM--GPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGSVSPAV 325
P L + G Y + +PA G+ QY YP + P+ +S V
Sbjct: 409 PALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI--TPIAHS-------V 459
Query: 326 ANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 385
P GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKC
Sbjct: 460 PQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKC 519
Query: 386 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 520 FGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 562
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETK 153
DG + KLF+G +P+N+ E ++ LF +G I +L +L+ KGCAFL Y +
Sbjct: 114 DGTKDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCAR 173
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+ A+ A A++ + + G + P+ VK AD+E
Sbjct: 174 DSAIKAQTALHEQKTLPGMARPIQVKPADSE 204
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Query: 329 NPSTSSSGGTGPPGAN-----------LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVD 377
PS S G PPG LF+ IP+ +++L F+ FGR+ V D
Sbjct: 97 RPSPVGSSGPEPPGGQPDGTKDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKD 156
Query: 378 KATGVSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
TG+ K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 157 PYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 206
>gi|281337967|gb|EFB13551.1| hypothetical protein PANDA_012783 [Ailuropoda melanoleuca]
Length = 462
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 182/462 (39%), Positives = 243/462 (52%), Gaps = 68/462 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 23 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 82
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 83 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 142
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 143 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 202
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q L PSL LP PY+ Y + LMQ + + +
Sbjct: 203 MQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSGSY 245
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM------ 302
+ P V +S N P P SG G AVPGL P+
Sbjct: 246 --LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAG 303
Query: 303 --PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSS---GGTG---------- 339
P+PG GH L + G V SP VA + +P+ S GTG
Sbjct: 304 VVPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTGTGAVRPSLGRGP 360
Query: 340 -------------PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 386
P G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCF
Sbjct: 361 APRPRLPGVATPRPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCF 420
Query: 387 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
GFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 421 GFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 462
>gi|327272096|ref|XP_003220822.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Anolis
carolinensis]
Length = 487
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 242/444 (54%), Gaps = 40/444 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPM--GYAPPYNGYGYQASGSYGLMQYR----- 241
RR Q+ +Q N + +G L G P Y QA+ S L +
Sbjct: 236 QRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQM 290
Query: 242 -----------------LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPP 284
L + G G +N NA+ G + L+ +G
Sbjct: 291 AVAASTANSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAA-LNGGLGATGLTNGT 349
Query: 285 SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGAN 344
+G + + A G+Q Y L P S + A + S GP GAN
Sbjct: 350 AGTMDALTQAYSGIQ---QYAAAAL---PTLYSQSLLQQQSAAGSQKEGLSFLKGPEGAN 403
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI M
Sbjct: 404 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAM 463
Query: 405 NGCQLGGKKLKVQLKRDNKQNKPY 428
NG Q+G K+LKVQLKR +KPY
Sbjct: 464 NGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|50508361|dbj|BAD30314.1| putative apoptosis-related RNA binding protein [Oryza sativa
Japonica Group]
gi|50510235|dbj|BAD31433.1| putative apoptosis-related RNA binding protein [Oryza sativa
Japonica Group]
gi|215687308|dbj|BAG91895.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 414
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 174/415 (41%), Positives = 223/415 (53%), Gaps = 82/415 (19%)
Query: 89 LQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK--G 144
+QVKYADGELERL E KLFIGMLP++V E EVSALFS YG I+ L++LR Q+T K
Sbjct: 1 MQVKYADGELERLAAEQKLFIGMLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKAAA 60
Query: 145 CAFLKYETKEQALAALEAINGKHKM-EGSSVPLVVKWADTEKERQARRAQKAQSQANNLP 203
CA L++ +KE A AA+EA+NG + GSS LVVK ADTE+E+QAR+AQKAQ+Q + P
Sbjct: 61 CAILEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTEREKQARKAQKAQAQPSK-P 119
Query: 204 NADSQHPSLF---GALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQN------------- 247
P L GA M + PPYN Y+ G+ L M N
Sbjct: 120 LRFYLFPQLLSISGAPQMSFLPPYNVLDYKTEGTTDPELKDLMKMTNDKLEMLVTELKSV 179
Query: 248 --------------QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP--PSGFVGSG 291
QP H ++P + + D + P +Y P +
Sbjct: 180 VNLLENRVTYNDPIQPIQHSLLPVEHDEKQYKPNECDSKTLEVPGHYGHTKNPLALYSTM 239
Query: 292 YPAV--------------PG--------------LQYPMP----------YPGGMLGHRP 313
YP V PG +Q P P Y G ++G P
Sbjct: 240 YPHVNQGNLLQGLNTNIFPGTDPKISNLIQSAGYIQPPYPDLSGLHYPVSYAGALVGDTP 299
Query: 314 LNNSPGSVSPAVANSNPSTSSSGG------TGPPGANLFIYHIPQEFGDQELGNAFQAFG 367
S G V+ ++SN ++S++ GPP ANLF+Y IPQE+GD++L N FQ FG
Sbjct: 300 QYFSDGKVNIPNSHSNHASSAANTKIGSKIEGPPRANLFVYDIPQEYGDEDLANLFQEFG 359
Query: 368 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
R+LS KVF+D+ATGVSKCFGFVSY++PASAQ AI MNG Q+GGK LKVQLKR+
Sbjct: 360 RILSTKVFIDRATGVSKCFGFVSYDTPASAQAAIRRMNGSQIGGKMLKVQLKRET 414
>gi|338717391|ref|XP_003363632.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
6-like [Equus caballus]
Length = 540
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 171/431 (39%), Positives = 231/431 (53%), Gaps = 49/431 (11%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 146 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 205
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 206 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 265
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LV+K ADT++ER R
Sbjct: 266 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVIKLADTDRERALR 325
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAP-PYNGYGYQASGSYGLMQYRLPPMQNQP 249
R Q Q GA Y P P +A G Y RLP P
Sbjct: 326 RMQXMSGQ--------------LGA----YQPAPLT---LEACGDY---TRRLPAPAAGP 361
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMG-----PRNYAMPPSGFVGSG----YPA-VPGLQ 299
G + G D S +MG P+N P S + S +PA PG+
Sbjct: 362 G------------TLPGLHGDPSGSMGFRPLTPQNNGQPGSDTLYSNGALPFPAQSPGVA 409
Query: 300 YPM--PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQ 357
P+ Y G ++ VS A + GP G NLFIYH+PQEFGD
Sbjct: 410 DPLQQAYAGMHHYAAAYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDA 469
Query: 358 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 417
EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQ
Sbjct: 470 ELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQ 529
Query: 418 LKRDNKQNKPY 428
LKR N+PY
Sbjct: 530 LKRPKDANRPY 540
>gi|393906351|gb|EJD74254.1| HrETR-1 protein [Loa loa]
Length = 507
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 175/481 (36%), Positives = 239/481 (49%), Gaps = 80/481 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 42 DTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAVRC 101
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V ALF+ +
Sbjct: 102 QAALHDQKTLPGMNRAMQVKPADNESRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPF 161
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ T QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 162 GVIDEVTVLRGADGLSKGCAFVKFATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKE 221
Query: 187 RQARRAQKAQSQANNLPNADSQHPSLFGA----------------------LPMGYAPPY 224
RQ RR Q+ +Q L ++ P+ AP
Sbjct: 222 RQLRRMQQMAAQMGLLNPVLVNQAGVYNTAYQQLLQQQATLVAAQTAAAAYFPVAMAPQT 281
Query: 225 NGYGYQASGSYG----LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY 280
+G+ L Q+ L P+ P+ Q ++++ S LS P +Y
Sbjct: 282 ALTAAGLAGTTNPATFLTQHPLQPISAL--------PLQQAHSVQAISA-LSQPYAPVDY 332
Query: 281 AMPPSGFVGSGYP-------AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVAN------ 327
A + V P AV Y +P G + P P P+V N
Sbjct: 333 AATAAASVTQYAPSSTAAAVAVDSTAYTLPASGTL----PAGTIPAVTLPSVYNPLVNLE 388
Query: 328 --SNPSTSSSGGT------------------GPPGANLFIYHIPQEFGDQELGNAFQAFG 367
+NP + GP G NLFIYH+PQEFGD EL F FG
Sbjct: 389 QQANPYNQALQQAIALQQAAILFPGAQKEVLGPEGCNLFIYHLPQEFGDTELMQMFMPFG 448
Query: 368 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 427
V+SAKVF+D+AT SKCFGFVSY++ ASA AI MNG Q+G K+LKVQLKR ++KP
Sbjct: 449 HVISAKVFIDRATNQSKCFGFVSYDNTASAMAAIQAMNGFQIGMKRLKVQLKR--PRDKP 506
Query: 428 Y 428
Y
Sbjct: 507 Y 507
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
ES+ + + E KLFVG + K E + A+F F ++DEV +++ S+GC FV
Sbjct: 126 ESRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPFGVIDEVTVLRG-ADGLSKGCAFVK 184
Query: 63 CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ +A A+NA H +T+PGASS L VK+AD E ER
Sbjct: 185 FATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKER 222
>gi|66269431|gb|AAY43160.1| napor protein long isoform [Danio rerio]
Length = 493
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 173/454 (38%), Positives = 245/454 (53%), Gaps = 44/454 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY---NGYGYQAS--GSYGLMQYRLP 243
RR Q+ +Q N+ S SL G G P Y G+ + A+ S L
Sbjct: 226 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLAVRGHTHAATPTSSTANAAAALL 283
Query: 244 PMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS-----GYPAVPGL 298
G + Q A G++ + S+ MG G G+ A+ G
Sbjct: 284 QQATSSSNLGAFSGIQQMAA--GSTANSSAAMGSLGSLGTLQGLAGATVGLNNINALAGS 341
Query: 299 QYPMPYPGGMLGHRPLNNSPGSVSPAVANSNP------------------------STSS 334
M G LG L+N GS P A + S +
Sbjct: 342 VNSMAALNGGLGSTGLSN--GSAGPMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAG 399
Query: 335 SGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 394
S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P
Sbjct: 400 SQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNP 459
Query: 395 ASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 VSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 493
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 224
>gi|148706792|gb|EDL38739.1| trinucleotide repeat containing 4, isoform CRA_e [Mus musculus]
Length = 447
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 230/444 (51%), Gaps = 46/444 (10%)
Query: 21 QVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKK 80
Q+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +A H +K
Sbjct: 14 QIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQK 73
Query: 81 TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
TLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG
Sbjct: 74 TLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDG 132
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN 200
TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 133 TSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLG 192
Query: 201 NLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQ 260
Q FGA Y+ Q + L PM
Sbjct: 193 MFSPIALQ----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAIS 244
Query: 261 GNAMRGA--SPDLSSNMGPRNYAMP----PSGFVGSGYPAV---------PGLQYP---M 302
N + +P ++ P A P P+ +GY V P YP
Sbjct: 245 ANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVH 304
Query: 303 PYPGGML--------------GHRPLNNSPGSVSPAVANSNPSTSSSGG----TGPPGAN 344
PYP L H L + SPA A +P + G TGP G N
Sbjct: 305 PYPDEALSAERSAGGVPIMSQAHSWLVMLSAAQSPA-APVDPLQQAYAGMQHYTGPDGCN 363
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI M
Sbjct: 364 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 423
Query: 405 NGCQLGGKKLKVQLKRDNKQNKPY 428
NG Q+G K+LKVQLKR N+PY
Sbjct: 424 NGFQIGMKRLKVQLKRPKDANRPY 447
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 152
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 153 NTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|157818811|ref|NP_001100297.1| CUGBP Elav-like family member 6 [Rattus norvegicus]
gi|149041860|gb|EDL95701.1| bruno-like 6, RNA binding protein (Drosophila) (predicted) [Rattus
norvegicus]
Length = 459
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 233/438 (53%), Gaps = 40/438 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ Q HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPM-------- 302
+ Q + S + + P G+G A+PGL PM
Sbjct: 266 LGQVAAVAAQMQHVAAFSLVAAPLLPAAANTSP----SGNGPGALPGLPAPMGVNGFGSL 321
Query: 303 -PYPGGMLGHRPLNNSPGSVSPA-------VANSNPSTSSS----GGTGPPGANLFIYHI 350
P G G L N+ S PA V+ + P S+ GP G NLFIYH+
Sbjct: 322 NPQTNGQPGSDSLYNNGLSPYPAYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHL 381
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 382 PQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIG 441
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR N+PY
Sbjct: 442 MKRLKVQLKRPKDANRPY 459
>gi|148694026|gb|EDL25973.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_b [Mus
musculus]
Length = 459
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 232/438 (52%), Gaps = 40/438 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ Q HP+ LP+G Y + + Q L PG
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPG 265
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPM-------- 302
+ Q + S + + P G+G A+PGL PM
Sbjct: 266 LGQVAAVAAQMQHVAAFSLVAAPLLPAAANTSP----GGNGPGALPGLPAPMGVNGFGSL 321
Query: 303 -PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG-----------TGPPGANLFIYHI 350
P G G L N+ S PA ++ S++ GP G NLFIYH+
Sbjct: 322 TPQSNGQPGSDTLYNNGVSPYPAYPSAYAPASTAFSQQPSALPQQQREGPEGCNLFIYHL 381
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G
Sbjct: 382 PQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIG 441
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR N+PY
Sbjct: 442 MKRLKVQLKRPKDANRPY 459
>gi|410918518|ref|XP_003972732.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Takifugu
rubripes]
Length = 474
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 244/448 (54%), Gaps = 51/448 (11%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFG--------------ALPMGYAPPYNGY-----GY 229
RR Q+ +Q N+ + SL G A G ++G G
Sbjct: 226 QRRLQQQLAQQMQQLNSATTWGSLTGLGGLTPQYLALLQQAASSGNLGAFSGIQQMAAGT 285
Query: 230 QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP---PSG 286
AS + G M L + G G +N NA+ G+ +++ G A +G
Sbjct: 286 TASSNAGAMN-SLTSLGTLQGLAGATVGLNNINALAGSINSMAALNGGLGGAGLTNGTAG 344
Query: 287 FVGSGYPAVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGP 340
+ + A G+Q P Y +L + + S GP
Sbjct: 345 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQ------------------GAAGSQKEGP 386
Query: 341 PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 400
GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ A
Sbjct: 387 EGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 446
Query: 401 IAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
I MNG Q+G K+LKVQLKR +KPY
Sbjct: 447 IQAMNGFQIGMKRLKVQLKRSKNDSKPY 474
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 224
>gi|170584368|ref|XP_001896973.1| RNA binding protein [Brugia malayi]
gi|158595662|gb|EDP34201.1| RNA binding protein, putative [Brugia malayi]
Length = 489
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 240/477 (50%), Gaps = 72/477 (15%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 24 DTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAVRC 83
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V +LF+ +
Sbjct: 84 QAALHDQKTLPGMNRAMQVKPADNESRPESPKNAEERKLFVGMLSKQHNEDDVRSLFAPF 143
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ T QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 144 GVIDEVTVLRGADGLSKGCAFVKFATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKE 203
Query: 187 RQARRAQKAQSQANNLPNADSQHPSLFGA----------------------LPMGYAPPY 224
RQ RR Q+ +Q L ++ P+ AP
Sbjct: 204 RQLRRMQQMAAQMGLLNPVLVNQAGVYNTAYQQLLQQQATLVAAQTAAAAYFPVAMAPQT 263
Query: 225 NGYGYQASGSYG----LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY 280
+G+ L Q+ L P+ P+ Q N+++ S LS P +Y
Sbjct: 264 ALTAAGLAGTTNPATFLTQHPLQPLSAL--------PLQQANSVQAISA-LSQPYAPVDY 314
Query: 281 AMPPSGFVGSGYP-------AVPGLQYPMPYPGGM-LGHRPLNNSPGSVSPAVA---NSN 329
A + V P AV Y +P G + G P + +P V+ +N
Sbjct: 315 AAAAAASVTQYAPSSTAAAVAVDSTAYTLPASGTLPAGTISTVTLPSAYNPLVSLEQQAN 374
Query: 330 PSTSSSGGTGP--------PGA----------NLFIYHIPQEFGDQELGNAFQAFGRVLS 371
P + PGA NLFIYH+PQEFGD EL F FG V+S
Sbjct: 375 PYNQALQQAIALQQAAILFPGAQKEVLGPEGCNLFIYHLPQEFGDAELMQMFMPFGHVIS 434
Query: 372 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AKVF+D+AT SKCFGFVSY++ ASA AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 435 AKVFIDRATNQSKCFGFVSYDNTASAMAAIQAMNGFQIGMKRLKVQLKR--PRDKPY 489
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
ES+ E + E KLFVG + K E + ++F F ++DEV +++ S+GC FV
Sbjct: 108 ESRPESPKNAEERKLFVGMLSKQHNEDDVRSLFAPFGVIDEVTVLRG-ADGLSKGCAFVK 166
Query: 63 CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ +A A+NA H +T+PGASS L VK+AD E ER
Sbjct: 167 FATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKER 204
>gi|207028384|ref|NP_001128707.1| CUGBP, Elav-like family member 2 [Xenopus laevis]
gi|197359134|gb|ACH69783.1| RNA binding protein Bruno-like 3b [Xenopus laevis]
Length = 493
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 239/454 (52%), Gaps = 54/454 (11%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGVHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRG----SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
I++ +ILRG S+ + CAF+ + T+ A++A++ MEG S P+VVK+ADT+
Sbjct: 176 IEECRILRGPDGLSRASQHCCAFVTFSTRAMTQNAIKAMHQSQTMEGCSSPIVVKFADTQ 235
Query: 185 KERQARRAQKAQSQANNLPNADSQHPSLFGALPM--GYAPPYNGYGYQASGSYGLMQYR- 241
K+++ RR Q+ +Q N + +G L G P Y QA+ S L +
Sbjct: 236 KDKEQRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSG 290
Query: 242 ---------------------LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY 280
L + G G +N NA+ G + L+ +G
Sbjct: 291 IQQMAVAASTANSSAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAA-LNGGLGATGL 349
Query: 281 AMPPSGFVGSGYPAVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSS 334
+ + + A G+Q P Y +L + A +
Sbjct: 350 TNGTACTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQS----------AAGSQKEGLLF 399
Query: 335 SGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 394
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P
Sbjct: 400 ISSQGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNP 459
Query: 395 ASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 VSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 493
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGC 58
M + EK ++ E KLF+G V K E + MF F ++E I++ D +RAS+ C
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRASQHC 195
Query: 59 C-FVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
C FV +R A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 196 CAFVTFSTRAMTQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 238
>gi|340380143|ref|XP_003388583.1| PREDICTED: CUGBP Elav-like family member 4-like [Amphimedon
queenslandica]
Length = 494
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 234/456 (51%), Gaps = 75/456 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E VKLFVGQVPKH E L +++ + E+ I++ K TR +GC FV SR+ A+ A
Sbjct: 57 ESVKLFVGQVPKHFEEEDLRPYLEQYGPIGELLILRHKATRQHKGCAFVTYLSRESAELA 116
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
H+K LP + PLQV A + E L K+F+GML K + E+ V ++F +G I++L
Sbjct: 117 QRELHDKVILPTMTRPLQVNAAGTKQEELR-KVFVGMLSKTIDESHVRSMFERFGHIEEL 175
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+GCAF+K+ ++++A +A+ ++G M G+S PLVVK+ADTE+ER AR+
Sbjct: 176 TVLKDKDGYSRGCAFIKFSSRQEAQSAINEMHGSEIMAGASNPLVVKYADTERERHARKM 235
Query: 193 QKAQSQANNLP-NADSQ---HPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
QKA Q L N Q HP F P+ YA LMQ Q
Sbjct: 236 QKAMQQFAELSLNPVFQVLPHPQFFN--PIVYAQ--------------LMQ------QQS 273
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAV----------PGL 298
P G P ++ G A L S P + P +GS + PG
Sbjct: 274 PLLSGATPTLSPGGLYSPAPHTLLSPSSPTHVPSP----IGSSHAGATGTGTTAIGSPGG 329
Query: 299 QYPMPYPGGMLG-------------------HRPLNNSPGSVSPA---VANSNPST---- 332
+ PGGM G H PL + S + +NPST
Sbjct: 330 LHHGLAPGGMGGPHTTGLSHNGLHGASSEHIHSPLQSPLHGFSGYGLPYSFANPSTFGVP 389
Query: 333 --------SSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 384
SS GP G NLFIYH+PQ++GDQEL N F +G ++SAKV+VDK T SK
Sbjct: 390 SPTPPPPLPSSQKEGPEGCNLFIYHLPQDYGDQELVNLFGQYGHIVSAKVYVDKNTQQSK 449
Query: 385 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
CFGFVSY++P SA AI +NG ++G K+LKV+ K+
Sbjct: 450 CFGFVSYDNPQSASTAIFGLNGLEIGHKRLKVEHKK 485
>gi|410052930|ref|XP_003953367.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 5
[Pan troglodytes]
Length = 484
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 228/462 (49%), Gaps = 66/462 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E ++KD T +GC + +R A K
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIHENAVLKDPYTGMHKGCLPALYCARDSASKL 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTL G + L+ + + KLF+GML K SE +V LF +G I +
Sbjct: 103 KVAVHEQKTLSGVNRVLRCRPGWSAFRGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 162
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 222
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSY------- 235
Q+ Q L PSL LP PY+ Y SGSY
Sbjct: 223 QQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVAF 271
Query: 236 --------------GLMQYRL--------PPMQNQPGFHGIIPPVNQGNA----MRGASP 269
GL + PP+ G++ P+ G A G P
Sbjct: 272 SPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGGHP 331
Query: 270 DLSSNM--GPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGSVSPAVA 326
L + G Y + +PA G+ QY YP + P+ +S V
Sbjct: 332 ALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI--TPIAHS-------VP 382
Query: 327 NSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 386
P GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCF
Sbjct: 383 QPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCF 442
Query: 387 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
GFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 443 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 484
>gi|410928558|ref|XP_003977667.1| PREDICTED: CUGBP Elav-like family member 3-like [Takifugu rubripes]
Length = 435
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 233/455 (51%), Gaps = 63/455 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG V + EL +L + S+ +V LF +G+I +
Sbjct: 65 QSALHEQKTLPGLVYSGVVASSSSELLKLPITCIFATARQ--SDEDVRRLFEPFGSIDEC 122
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 123 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 182
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPP-------- 244
Q+ SQ +FG + + + P YN Y QA + + Q L
Sbjct: 183 QQVASQLG-----------IFGPMTLNF-PAYNAYT-QAVNAQLVQQQALVAQSAYLSPV 229
Query: 245 -------MQNQPGFH--GIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG----SG 291
MQ + GII + +P +N P A P S +G
Sbjct: 230 ATVAAVQMQQMAALNANGII-----ATPITPITPSSGTNTPPAIAATPVSAISAPIGVNG 284
Query: 292 YPAVP----GLQ------------YPMPYPG--GMLGHRPLNNSPGSVSPAVANSNPSTS 333
Y ++P G Q Y YP G++G +P P V+
Sbjct: 285 YSSLPAPTNGQQATEALYTNGVHPYQAAYPAAYGLVG-QPFPQQPTLVAQQHQQPQQQQQ 343
Query: 334 SSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 393
G P G N+FIYH+PQEF D EL F FG V+SAKVFVD+AT SKCFGFVS+++
Sbjct: 344 REG---PEGCNIFIYHLPQEFSDSELLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDN 400
Query: 394 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 401 PASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 435
>gi|325189112|emb|CCA23638.1| CUGBP and ETR3like factor putative [Albugo laibachii Nc14]
Length = 550
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 239/422 (56%), Gaps = 32/422 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+GQVP+ MTE +LL + + F V ++ II+DK T + RGC F S ++A++AV
Sbjct: 76 MKLFIGQVPRTMTETELLPILEAFGEVVDLTIIRDKLTGSHRGCAFASFASPEDAERAVE 135
Query: 75 ACHNKKTLPGASSPLQVKYADGEL-ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HNK TLP + +PLQV+ A+G+ EHKLFIGM+PK +E + +F +G I ++
Sbjct: 136 ELHNKVTLPDSINPLQVRPAEGQAGAAQEHKLFIGMIPKTATEQAIYDIFGEFGPIDEVF 195
Query: 134 ILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILR Q T SKGCAFLK++ +E A+A++E +NGK M PLVVK+AD+ ++R
Sbjct: 196 ILR-HQPTGQSKGCAFLKFKERESAVASIEQLNGKITMMNGVSPLVVKFADSRRQR---- 250
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ +S N+D+ + PMG NG S + Q+ MQ F
Sbjct: 251 LQRVRST-----NSDTSQAGYWQIPPMGDGS-VNGISLPVSQMQQMQQHY---MQQVQAF 301
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP---PSGFVGSGYPAVPGLQYPMPYPGGM 308
+ G+ + G++ +S M YA+ P G+ S Y + G Y
Sbjct: 302 GTQASGIAPGSVLPGSTSPTNSYMYYNPYALSGAVPYGYTNSLYETMGGPN--ASYSESA 359
Query: 309 LGHRPLNNSPGSVSPAVANSNPS---TSSSGGT-------GPPGANLFIYHIPQEFGDQE 358
+ + PGS S A++ S +S+GG GPPGANLFIYH+P + D +
Sbjct: 360 VHSGSSDVLPGSDSAALSGSMVGMDINASAGGVRSTTQLEGPPGANLFIYHLPHDLTDAD 419
Query: 359 LGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 418
L AF FG V+SAKV++DK TG SK FGFVSY++ +A NAIA MNG Q+G K+LKVQ
Sbjct: 420 LATAFAPFGTVISAKVYMDKLTGESKGFGFVSYDAAEAADNAIASMNGFQIGSKRLKVQH 479
Query: 419 KR 420
KR
Sbjct: 480 KR 481
>gi|444516747|gb|ELV11280.1| Poly [ADP-ribose] polymerase 6 [Tupaia chinensis]
Length = 972
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/405 (37%), Positives = 205/405 (50%), Gaps = 77/405 (19%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 3 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG S P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 63 KAQSALHEQKTLPGMSRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGQIQ 122
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TS+GCAF+K+ ++ + AL+ ++G M G+S LVVK ADT++ER R
Sbjct: 123 ECTVLRSPDGTSRGCAFVKFGSQGE---ALQGLHGSRTMAGASSSLVVKLADTDRERALR 179
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ Q HP+ LP+G A G+Y
Sbjct: 180 RMQQMAGQLGAF------HPA---PLPLG-----------ACGAY--------------- 204
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
N GA P S+ + P YPA YP Y
Sbjct: 205 -------TTATNGQPGADPLYSNGLSP--------------YPAA----YPSAY------ 233
Query: 311 HRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 370
VS A + GP G NLFIYH+PQEFGD EL F FG V+
Sbjct: 234 --------APVSTACPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELTQTFLPFGAVV 285
Query: 371 SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 415
SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LK
Sbjct: 286 SAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLK 330
>gi|363743697|ref|XP_423569.3| PREDICTED: CUGBP Elav-like family member 5 [Gallus gallus]
Length = 404
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 211/413 (51%), Gaps = 49/413 (11%)
Query: 54 ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 113
+++GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K
Sbjct: 3 SAKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQ 62
Query: 114 VSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 173
SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 63 QSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGAS 122
Query: 174 VPLVVKWADTEKERQARRAQKAQSQAN------NLPNAD---------SQHPSLFGALPM 218
LVVK+ADT+KER RR Q+ Q LP + Q ++
Sbjct: 123 SSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHG 182
Query: 219 GYAPP---YNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSS-- 273
Y P ++ Q G+ L P+ G H PP+ AM G +S+
Sbjct: 183 SYLSPGVAFSPCHIQQIGAVSLNGLPAAPIAQTSGLHS--PPLLGTTAMPGLVAPISNGF 240
Query: 274 -------NMGPRNYAMPPSGFV----------GSGYPAVPGL-QYPMPYPGGMLGHRPLN 315
N P + +GFV + +PA G+ QY YP
Sbjct: 241 TGVVPFPNGHPALETVYTNGFVPYSAQSPSVAETLHPAFSGVQQYAAVYP---------T 291
Query: 316 NSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 375
S ++ ++ P GP G NLFIYH+PQEFGD EL F FG ++S+KVF
Sbjct: 292 TSITPIAQSIPQPPPVLQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVF 351
Query: 376 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR N PY
Sbjct: 352 MDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY 404
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ S+GC FV S EA A++A
Sbjct: 53 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 111
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 112 LHGSQTMPGASSSLVVKFADTDKERTLRRM 141
>gi|326934283|ref|XP_003213221.1| PREDICTED: CUGBP Elav-like family member 5-like [Meleagris
gallopavo]
Length = 379
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 214/413 (51%), Gaps = 61/413 (14%)
Query: 41 VDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++E + T S+GC F+ +R A KA A H +KTLPG + P+QVK AD E
Sbjct: 3 IEESLTLVMSTWNLSQGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG 62
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
+ KLF+GML K SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+
Sbjct: 63 GDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAI 122
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGY 220
A++G M G+S LVVK+ADT+KER RR Q+ Q PSL LP
Sbjct: 123 HALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIF------TPSL--TLPFS- 173
Query: 221 APPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY 280
PY+ Y + LMQ + + G + ++ G A SP +G +
Sbjct: 174 --PYSAY------AQALMQQQTTVLSTSHGSY-----LSPGVAF---SPCHIQQIGAVSL 217
Query: 281 AMPPSGFVGSGYPAVPGLQY------PMPYPGGMLGHRPLNNSPGS---VSPAVANSNPS 331
+G PA P Q P G G + + PG+ +SP + P+
Sbjct: 218 ---------NGLPAAPIAQTSGEGTDSAPLSSGRPGFK--VSPPGARFVLSPWITAVYPT 266
Query: 332 TSSS----------------GGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 375
TS + GP G NLFIYH+PQEFGD EL F FG ++S+KVF
Sbjct: 267 TSITPIAQSIPQPPPVLQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVF 326
Query: 376 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR N PY
Sbjct: 327 MDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY 379
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ S+GC FV S EA A++A
Sbjct: 66 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 124
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 125 LHGSQTMPGASSSLVVKFADTDKERTLRRM 154
>gi|348526886|ref|XP_003450950.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1
[Oreochromis niloticus]
Length = 458
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 227/464 (48%), Gaps = 58/464 (12%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K S+ +V LF +G+I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRRLFEPFGSIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAAL-----------------------EAINGKHKM 169
+LRG TSKGCAF+K++ +A AA+ E G +M
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 184
Query: 170 E------GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPP 223
+ G P+ + + QA AQ Q QA +A + A+ M
Sbjct: 185 QQVASQLGIFSPMTLNFPAYNAYTQAVNAQLVQQQALVAQSAYLSPVATVAAVQMQQMAA 244
Query: 224 YNGYGYQASGSYGLMQYR---------------LPPMQNQPGFHGIIPPVNQGNAMRGAS 268
N G A+ + LPP G+ + P N G
Sbjct: 245 LNANGIIATPITPITPSSGTNTPPTIAATPVPALPPPIGVNGYSSVPAPSN------GQQ 298
Query: 269 PDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQ-YPMPYPG--GMLGHRPLNNSPGSVSPA 324
+ G Y A P+ + A G+Q Y YP G++G +P P V+
Sbjct: 299 TETLYTNGVHPYQAQSPAAALDPLQQAYAGMQHYTAAYPAAYGLVG-QPFPQQPTLVAQQ 357
Query: 325 VANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 384
G P G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SK
Sbjct: 358 HQQPQQQQQREG---PEGCNIFIYHLPQEFSDSEMLQMFLPFGNVISAKVFVDRATNQSK 414
Query: 385 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
CFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 415 CFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
>gi|348667006|gb|EGZ06832.1| hypothetical protein PHYSODRAFT_353005 [Phytophthora sojae]
Length = 507
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/417 (39%), Positives = 225/417 (53%), Gaps = 23/417 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ M E L + + F ++++ II+DK T A RGC F +R A+KAV
Sbjct: 36 VKLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYFTRDAAEKAVQ 95
Query: 75 ACHNKKTLPGASSPLQVKYADGEL-ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HNK TLP + +PLQV+ A+G+ EHKLFIGM+PK EA + +F ++GTI+++
Sbjct: 96 ELHNKVTLPQSINPLQVRPAEGQAGASQEHKLFIGMIPKTADEAAIREVFELFGTIEEVY 155
Query: 134 ILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR + SKGCAFLK++ + ALAA+E +NG M+ + PLVVK+AD+ ++R R
Sbjct: 156 ILRHPATGQSKGCAFLKFKERSSALAAIEEVNGNVTMDRGTSPLVVKFADSRRQRLQRAR 215
Query: 193 QKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
A + P LP G A P Q P
Sbjct: 216 NLAAAANAYWP------------LPPGAGLAFPQLQQLQQQYMQQMQAFGAQAAAGLNPA 263
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG-SGYPAVPGLQYPMPYPGGML 309
G+ PV G+ + P +A +G G G P V G + + GG+
Sbjct: 264 VAGLGSPVEATAGGPGSPTNSFMYYNPYGFAAGAAGPYGFGGLPNVGGAGFDI-QAGGLG 322
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRV 369
L G A A ++ +TS GP GANLFIYH+P + D +L AF FG V
Sbjct: 323 AGLDLQ---GQGVEAAAKASRTTSQL--EGPTGANLFIYHLPHDLTDADLATAFAPFGTV 377
Query: 370 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
+SAKV++DK TG SK FGFVSY+S +A AIA MNG Q+G K+LKVQ KR +++N
Sbjct: 378 ISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIHQRND 434
>gi|350580719|ref|XP_003123087.3| PREDICTED: CUGBP, Elav-like family member 5 [Sus scrofa]
Length = 444
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 208/419 (49%), Gaps = 67/419 (15%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 46 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQS 105
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 106 EEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 165
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG------- 228
LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 166 LVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQ 214
Query: 229 ---YQASGSY---------------------GLMQYRL--------PPMQNQPGFHGIIP 256
SGSY GL + PP+ G++
Sbjct: 215 TTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTAAVPGLVA 274
Query: 257 PVNQGNA----MRGASPDLSSNM--GPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGML 309
P+ G A G P L + G Y + +PA G+ QY YP +
Sbjct: 275 PITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI 334
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRV 369
P+ +S V P GP G NLFIYH+PQEFGD EL F FG +
Sbjct: 335 --TPIAHS-------VPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNI 385
Query: 370 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 386 ISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 444
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 83 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 140
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 141 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 182
>gi|301100224|ref|XP_002899202.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262104119|gb|EEY62171.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 496
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 225/419 (53%), Gaps = 29/419 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ M E L + + F ++++ II+DK T A RGC F +R A+KAV
Sbjct: 32 VKLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYFTRDAAEKAVQ 91
Query: 75 ACHNKKTLPGASSPLQVKYADGEL-ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HNK TLP + +PLQV+ A+G+ EHKLFIGM+PK EA + +F ++G+I+++
Sbjct: 92 ELHNKVTLPQSINPLQVRPAEGQAGASQEHKLFIGMIPKTADEAAIRDVFELFGSIEEVY 151
Query: 134 ILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR + SKGCAFLK++ + ALAA+E +NG M+ + PLVVK+AD+ ++R R
Sbjct: 152 ILRHPATGQSKGCAFLKFKERSSALAAIEEVNGIVTMDRGTSPLVVKFADSRRQRLQR-- 209
Query: 193 QKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
A NL A + + LP G A P Q P
Sbjct: 210 ------ARNLAAATNA----YWPLPPGAGLAFPQLQQLQQQYMQQMQAFGAQAAAGMSPT 259
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNYAM---PPSGFVGSGYPAVPGLQYPMPYPGG 307
G+ PV + G+ + P +A P GF G P V + M G
Sbjct: 260 VAGLGSPVGATASGPGSPTNSFMYYNPYGFAAGAAAPYGF--GGMPNVAAAGFDMQT--G 315
Query: 308 MLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFG 367
+ L + A S ++S GP GANLFIYH+P + D +L AF FG
Sbjct: 316 LGASLDLQGQGAEAAKA------SRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFG 369
Query: 368 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
V+SAKV++DK TG SK FGFVSY+S +A AIA MNG Q+G K+LKVQ KR ++++
Sbjct: 370 TVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIHQRSD 428
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYE 151
YAD + KLF+G +P+ + E ++ + ++G ++DL I+R +GCAF Y
Sbjct: 22 YADPQQHNGPVKLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYF 81
Query: 152 TKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
T++ A A++ ++ K + S PL V+ A+
Sbjct: 82 TRDAAEKAVQELHNKVTLPQSINPLQVRPAE 112
>gi|410921164|ref|XP_003974053.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 2 [Takifugu
rubripes]
Length = 500
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 233/469 (49%), Gaps = 95/469 (20%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 75 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 134
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I+
Sbjct: 135 AQNALHEQKTLPGMTRPIQVKPADSESRGGKDRKLFVGMLNKQQTEEDVYRLFEPYGVIE 194
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER R
Sbjct: 195 ECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIR 254
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
R Q+ Q FG A P++ Y +S ++ LMQ + M G
Sbjct: 255 RMQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQQQAAIMAASHG 297
Query: 251 FH---GIIPPVNQGNAMRGASPDL--SSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYP 305
+ + P Q + M + + + M P + PP+ S P++ P
Sbjct: 298 GYLTPSVAFPATQIHQMGALNINSLPPTPMTPVSGDSPPANITTSAVPSI-----VTPIV 352
Query: 306 GGMLG--HRPLNNSPG-------------SVSPAVANS--------------NPSTSSS- 335
G G H+P N P + SP A++ P+T+ +
Sbjct: 353 NGFTGIPHQP-NGHPAVETMYTNGLPPYSTQSPTAADTLQQAFTGVQQYTAIYPATTLTP 411
Query: 336 -GGT---------------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
G T GP G NLFIYH+PQEFGD EL F
Sbjct: 412 IGQTLPQPPQVIQQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLP-------------- 457
Query: 380 TGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FGFVS+++PASAQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 458 ------FGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 500
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 312 RPLNNS-PGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 370
+P+N S P S+ P N + LFI IP+ +++L F+ FG++
Sbjct: 55 KPMNGSEPISIHPESGNMKDQDA---------IKLFIGQIPRNLEEKDLKPLFEQFGKIH 105
Query: 371 SAKVFVDKATGVSKCFGFVSY---ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
V D+ TG+ K F++Y ES AQNA+ L G +Q+K + +++
Sbjct: 106 ELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQK--TLPGMTRPIQVKPADSESR 162
>gi|198431689|ref|XP_002121627.1| PREDICTED: similar to CUG triplet repeat, RNA binding protein 2
[Ciona intestinalis]
Length = 498
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 243/484 (50%), Gaps = 71/484 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+F+GQ+PK E+++ + + + ++NI+++K + S+GCCFV +R+ A A
Sbjct: 18 DAIKMFIGQIPKTWVESEVREFLEGYGPIYQLNILREKGSVMSKGCCFVTFYTRKAALAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N HN KTLPG +Q+K AD E + + KLFIGM+ K ++E ++ LF +G I++
Sbjct: 78 QNELHNMKTLPGMHHCVQMKPADSENKSEDRKLFIGMISKKMTEQDLRQLFCPFGNIEEC 137
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+IL SKGCAF+ Y + A A+ ++ MEG S P+VVK AD+ K+++ ++
Sbjct: 138 RILMNPDGVSKGCAFVTYSKRVSAQNAIRNMHQSTTMEGCSAPIVVKIADSPKDKERKKT 197
Query: 193 QKAQS-QANNLPNADSQHPSLFGALPM--------GYAPPYNGYGYQASGSYGLMQYR-- 241
Q + Q N N L P+ Y P N + SG + Q +
Sbjct: 198 QSQLAMQLNQFSNQWKNLSGLAALAPVLQSLACNNQYNAPSNQHN---SGVFSTTQLQQA 254
Query: 242 -------LPPMQNQ------------PGFHGIIPPVNQGNAMRGASP--------DLSSN 274
+ NQ PG GI +Q ASP +SN
Sbjct: 255 LTIAAAAQTLLSNQPSSVSHNNSNSVPGSSGISSMTSQYGGNVCASPSGTSYRSHSHNSN 314
Query: 275 MGPRNYAMP-PSGFVGSGYPAVPGLQYPMPYPGGMLGHRP-------LNNSPGSVSPAV- 325
M + ++ P PS + +G + P+ L + LN+SP S + +
Sbjct: 315 MWAQQHSAPYPSAGMNNGMSSGCSSTSPLDPMTMNLAQQSGSNLTLDLNHSPSSTATGIN 374
Query: 326 -------ANSNPST-----------SSSGGTGPPG---ANLFIYHIPQEFGDQELGNAFQ 364
A ++P++ SS G+ G +NLFIYH+P F D +L F
Sbjct: 375 PTAHMLAALTSPTSMYNQSMMHPHNSSPAGSHKEGPEGSNLFIYHLPTHFTDHDLMQTFF 434
Query: 365 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 424
FG ++SAKVF+DK T +SKCFGFVSY++PASAQ+AI M+G Q+G K+LKVQLKR +
Sbjct: 435 TFGTIVSAKVFIDKQTNLSKCFGFVSYDNPASAQHAIQAMHGFQIGMKRLKVQLKRPKGE 494
Query: 425 NKPY 428
+K Y
Sbjct: 495 SKAY 498
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
SE+R KLF+G + K MTE L +F F ++E I+ + S+GC FV R A
Sbjct: 105 SEDR-KLFIGMISKKMTEQDLRQLFCPFGNIEECRILMNPDG-VSKGCAFVTYSKRVSAQ 162
Query: 71 KAVNACHNKKTLPGASSPLQVKYAD 95
A+ H T+ G S+P+ VK AD
Sbjct: 163 NAIRNMHQSTTMEGCSAPIVVKIAD 187
>gi|440912153|gb|ELR61745.1| CUGBP Elav-like family member 5, partial [Bos grunniens mutus]
Length = 398
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 160/418 (38%), Positives = 207/418 (49%), Gaps = 67/418 (16%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 1 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 60
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 61 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 120
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG-------- 228
VVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 121 VVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQT 169
Query: 229 --YQASGSY---------------------GLMQYRL--------PPMQNQPGFHGIIPP 257
SGSY GL + PP+ G++ P
Sbjct: 170 TVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAP 229
Query: 258 VNQGNA----MRGASPDLSSNM--GPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGMLG 310
+ G A G P L + G Y + +PA G+ QY YP +
Sbjct: 230 ITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI- 288
Query: 311 HRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 370
P+ +S V P GP G NLFIYH+PQEFGD EL F FG ++
Sbjct: 289 -TPIAHS-------VPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNII 340
Query: 371 SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 341 SSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 398
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 37 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 94
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 95 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 136
>gi|219109993|ref|XP_002176749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411284|gb|EEC51212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 499
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 217/428 (50%), Gaps = 73/428 (17%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
S ++ +KLFVGQVPK M+E + F F + +V II+DK T RGC FV
Sbjct: 112 SADNDDGEDDPMKLFVGQVPKAMSEEDVFPTFDSFGPLKDVAIIRDKHTGLHRGCAFVTY 171
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S +A++A A H+ T PGA QVK A+ + E+KLF+GML + +E E+ LF
Sbjct: 172 WSAADAERAQEALHDTFTFPGARRAAQVKPAEPSVP--ENKLFVGMLSRKATEVEIRELF 229
Query: 124 SIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
+G I+++ ++R + +SK AFL+Y + A+ A+E +N + MEG++ PL+V++AD
Sbjct: 230 EPFGEIREVYMIRNADGSSKCAAFLRYMKRGAAVQAIETLNNIYMMEGAARPLIVRFADN 289
Query: 184 EKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA--PPYNGYGYQASGSYGLMQYR 241
+ +R R+ + + + A+ GYA PP+
Sbjct: 290 KHQRHQRQIRNIRRH------------EMIAAMGGGYATYPPH----------------- 320
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAM---PPSGFVGSGYPAV-PG 297
+Q Q G G GASP + + P PP+G G+P + P
Sbjct: 321 ---VQVQMGMPG----------HPGASPQYTVPVPPHYVEAAYGPPNGAPMPGHPYMYPP 367
Query: 298 LQY-PMP---YPGGMLGH-RPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQ 352
QY P P YP +P NN P GP GANLF+YH+P
Sbjct: 368 QQYAPTPAYIYPEHTSEETKPTNNRPRE------------------GPAGANLFVYHLPH 409
Query: 353 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 412
+ D +L AF FG V+SAKV+VDK +G SK FGFVSY+S +A+ AI MNG Q+G K
Sbjct: 410 DLTDADLATAFNPFGNVISAKVYVDKYSGESKGFGFVSYDSVIAAEAAIEQMNGFQIGNK 469
Query: 413 KLKVQLKR 420
+LKVQ KR
Sbjct: 470 RLKVQHKR 477
>gi|449270204|gb|EMC80905.1| CUG-BP- and ETR-3-like factor 5, partial [Columba livia]
Length = 403
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 163/421 (38%), Positives = 213/421 (50%), Gaps = 70/421 (16%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQS 60
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 61 EDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 120
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSY 235
LVVK+ADT+KER RR Q+ Q PSL LP PY+ Y +
Sbjct: 121 LVVKFADTDKERTLRRMQQMVGQLGIF------TPSL--TLPFS---PYSAY------AQ 163
Query: 236 GLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GY 292
LMQ + + G + + P V +S N P P SG G
Sbjct: 164 ALMQQQTTVLSTSHGSY-LSPGVAFSPCHIQQIGAVSLNGLPAAPIAPASGLHSPPLLGT 222
Query: 293 PAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS--------- 328
A+PGL P+ P+P G H L + G V SP+VA +
Sbjct: 223 AAMPGLVAPISNGFTGVIPFPNG---HPTLETVYTNGLVPYSAQSPSVAETLHPAFTGVQ 279
Query: 329 -----NPSTSSS----------------GGTGPPGANLFIYHIPQEFGDQELGNAFQAFG 367
P+T+ + GP G NLFIYH+PQEFGD EL F FG
Sbjct: 280 QYAAVYPTTTITPIAQSIPQPPPILQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFG 339
Query: 368 RVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 427
++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR N P
Sbjct: 340 NIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHP 399
Query: 428 Y 428
Y
Sbjct: 400 Y 400
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 38 ADSESRGGRDR-KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKF 95
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 96 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 137
>gi|395513595|ref|XP_003761008.1| PREDICTED: CUGBP Elav-like family member 5 [Sarcophilus harrisii]
Length = 429
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 203/408 (49%), Gaps = 45/408 (11%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 30 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 89
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 90 EDVLRLFQPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 149
Query: 177 VVKWADTEKERQARRAQKAQSQAN------NLPNAD---------SQHPSLFGALPMGYA 221
VVK+ADT+KER RR Q+ Q LP + Q ++ Y
Sbjct: 150 VVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHGSYL 209
Query: 222 PP---YNGYGYQASGSYGLMQYRLPPMQNQPGFH-----------GIIPPVNQGNA---- 263
P ++ Q G+ L P+ G H G++ P+ G A
Sbjct: 210 SPGVAFSPCHIQQIGAVSLNGIPATPIAPASGLHSPPLLGTAAVPGLVTPITNGFAGVVP 269
Query: 264 MRGASPDLSSNM--GPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGS 320
G P L + G Y + +PA G+ QY YP + P+ +S
Sbjct: 270 FPGGHPALETVYANGLVPYPAQSPSMAETLHPAFSGVQQYTAMYPTAAI--TPIAHS--- 324
Query: 321 VSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 380
GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT
Sbjct: 325 ---VPQPPPIIQQQQQREGPEGCNLFIYHLPQEFGDSELMQMFLPFGNIISSKVFMDRAT 381
Query: 381 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQLKR + PY
Sbjct: 382 NQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDASHPY 429
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 66 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGN-SKGCAFVKF 123
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 124 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 165
>gi|354488715|ref|XP_003506512.1| PREDICTED: CUGBP Elav-like family member 5-like [Cricetulus
griseus]
Length = 569
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 205/426 (48%), Gaps = 84/426 (19%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 173 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 232
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 233 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 292
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG-------- 228
VVK+ADT++ER RR Q+ Q L PSL LP PY+ Y
Sbjct: 293 VVKFADTDRERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQT 341
Query: 229 --YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSG 286
SGSY PP + Q A +S N P P SG
Sbjct: 342 TVLSTSGSYLSPGVAFPPCH-----------IQQIGA-------VSLNGLPATPITPASG 383
Query: 287 FVGS---GYPAVPGLQYPMP--YPGGML---GHRPLNNSPG-------SVSPAVANS--- 328
G AVPGL P+P +PG + H L + + SP VA S
Sbjct: 384 LHSPPLLGTAAVPGLVAPIPNAFPGVLPFPGSHPALETAYANGLVPYPAQSPTVAESLHP 443
Query: 329 --------------------------NPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNA 362
P GP G NLFIYH+PQEFGD EL
Sbjct: 444 AFSGVQQYTAMYPTAAIAPVAHCVPQPPHLLQQQREGPEGCNLFIYHLPQEFGDTELTQM 503
Query: 363 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
F FG ++S+KVF+D+AT SKCFGFVS++ PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 504 FLPFGNIISSKVFMDRATNQSKCFGFVSFDHPASAQAAIQAMNGFQIGMKRLKVQLKRPK 563
Query: 423 KQNKPY 428
PY
Sbjct: 564 DPGHPY 569
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 209 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 266
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 267 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDRERTLRRM 308
>gi|83315537|ref|XP_730836.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23490683|gb|EAA22401.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana, putative
[Plasmodium yoelii yoelii]
Length = 440
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 217/425 (51%), Gaps = 86/425 (20%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+ E QL +F+EF +V+EV II+DK T + FV S EAD A+
Sbjct: 15 IKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIR 74
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPKN++E + +F
Sbjct: 75 SLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSLPKNITEESIKDMF 134
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 135 SVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLEGCNRPVEVRFAE 194
Query: 183 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRL 242
+ +Q AQSQ +
Sbjct: 195 PKSSKQ------AQSQVG-----------------------------------------I 207
Query: 243 PPMQNQPGFHGIIPPVNQG---NAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-----A 294
P+QN P HGI P + G N G + +++N PR + + G G P
Sbjct: 208 QPLQNAP--HGISPQAHPGTPNNINYGNNFGVNNNY-PRQVGVWKEYYSGEGRPYYYNEQ 264
Query: 295 VPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSS-SGGTGPPGANLFIYHIPQE 353
Q+ MP L N+NP+ + S +GPPGANLFI+H+P E
Sbjct: 265 TNTTQWEMPKEFETL---------------FMNNNPNIHNLSDSSGPPGANLFIFHVPNE 309
Query: 354 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 413
+ +L AF FG +LSA++ +K TG ++ F FVSYE+ SA AI+ MNG KK
Sbjct: 310 WQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYENIESAAAAISQMNGFMALNKK 369
Query: 414 LKVQL 418
LKV +
Sbjct: 370 LKVTV 374
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 58/87 (66%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 108 ESGVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 167
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+++ + KKTL G + P++V++A+
Sbjct: 168 ALYAISSLNGKKTLEGCNRPVEVRFAE 194
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LFI +P+ + +++L F+ FG V + DK T + K FV S + A N
Sbjct: 12 PVSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADN 71
Query: 400 AIAMMNG-----CQLGGKKLK 415
AI +N QLG ++K
Sbjct: 72 AIRSLNNQRTLDQQLGSLQVK 92
>gi|124513886|ref|XP_001350299.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23615716|emb|CAD52708.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 509
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 215/423 (50%), Gaps = 78/423 (18%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK++ E QL +F+E+ +V+EV II+DK T + FV S EAD A+
Sbjct: 85 IKLFIGRVPKNIEEDQLRPIFEEYGIVNEVVIIRDKITNVHKSSAFVKMASISEADNAIR 144
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+N+KTL LQVKYA GEL +L + KLFIG LPKN++E + +F
Sbjct: 145 LLNNQKTLDAQLGSLQVKYASGELNKLGFPQNIESGVDQAKLFIGSLPKNITEDNIKEMF 204
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YGT++++ I++ S KGC+F+K+ KEQAL A++++NGK +EG + P+ V++A+
Sbjct: 205 SPYGTVEEVFIMKDNSTGLGKGCSFVKFSYKEQALYAIKSLNGKKTLEGCTRPVEVRFAE 264
Query: 183 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRL 242
+ +Q + +P+ L
Sbjct: 265 PKSSKQPQ-------------------------IPL----------------------TL 277
Query: 243 PPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-----AVPG 297
PMQN P P ++ N + + +N PR + G G P
Sbjct: 278 QPMQNPPHAMAPQPSISSPNNINFGNNFSVNNNYPRQVGPWKEYYSGEGRPYYYNEQTNT 337
Query: 298 LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQ 357
Q+ MP L +NNS AN + + SS GPPGANLFI+H+P E+
Sbjct: 338 TQWEMPKEFETLF---MNNS--------ANMHNLSESS---GPPGANLFIFHVPNEWQQT 383
Query: 358 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 417
+L AF FG +LSA++ +K TG ++ F FVSY+S SA AI+ MNG KKLKV
Sbjct: 384 DLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYDSLESAAAAISQMNGFMALNKKLKVT 443
Query: 418 LKR 420
+K+
Sbjct: 444 VKK 446
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 178 ESGVDQAKLFIGSLPKNITEDNIKEMFSPYGTVEEVFIMKDNSTGLGKGCSFVKFSYKEQ 237
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+ + + KKTL G + P++V++A+
Sbjct: 238 ALYAIKSLNGKKTLEGCTRPVEVRFAE 264
>gi|47221605|emb|CAF97870.1| unnamed protein product [Tetraodon nigroviridis]
Length = 400
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 219/453 (48%), Gaps = 97/453 (21%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 8 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 67
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E
Sbjct: 68 QSALHEQKTLPGMNRPIQVKPADSE----------------------------------- 92
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
RG GCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 93 --GRG------GCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 144
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY--------GYQASGSYGLMQYRLPP 244
Q+ SQ +FG + + + P YN Y A +Y +
Sbjct: 145 QQVASQLG-----------IFGPMTLNF-PAYNAYKQALVQQQALVAQSAYLSPVATVAA 192
Query: 245 MQNQP----GFHGII-PPVNQGNAMRGASPDLSSNMGPRNYAMPPSG-------FVGSGY 292
+Q Q G +GII P+ P + N G + P +G + +
Sbjct: 193 VQMQQMAALGANGIIATPITPITPSSAIPPPIGVN-GYSSVPAPANGQQATEALYTNGVH 251
Query: 293 P--------------AVPGLQ-YPMPYPG--GMLGHRPLNNSPGSVSPAVANSNPSTSSS 335
P A G+Q Y YP G++G +P P V+
Sbjct: 252 PYQAQSPAALDPLQQAYAGMQHYTAAYPAAYGLVG-QPFPQQPTLVAQQHQQPQQQQQRE 310
Query: 336 GGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 395
G P G N+FIYH+PQEF D EL F FG V+SAKVFVD+AT SKCFGFVS+++PA
Sbjct: 311 G---PEGCNIFIYHLPQEFSDSELLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPA 367
Query: 396 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 368 SAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 400
>gi|223996717|ref|XP_002288032.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
gi|220977148|gb|EED95475.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
Length = 356
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 206/416 (49%), Gaps = 71/416 (17%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQVPK + E L +F+ + + ++ +I+D+ T RGC FV S ++A + VN
Sbjct: 2 LKLFVGQVPKTLAEEDLALLFEPYGRILDMTVIRDRRTGTHRGCAFVTYESGEDAMRVVN 61
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEH---------KLFIGMLPKNVSEAEVSALFSI 125
H K GA P QV+ A GE+E + KLF+G LP+ E V LF+
Sbjct: 62 EMHGKYRFEGAMWPAQVRPAQGEIEEGDDERDEGDEMAKLFVGQLPREADEDFVRELFTS 121
Query: 126 YGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG I + I++ +K GCAF+K+ ++ A AA++A++G+ +EG P+ VK+AD
Sbjct: 122 YGDITGIYIIKKRNNEAKNGCAFVKFRERDMAQAAIDALDGEVHLEGVDKPIRVKFADQ- 180
Query: 185 KERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPP 244
K Q ++ S+HP G +P QA Y M +R
Sbjct: 181 --------NKGQYHHRSMSGGGSRHPG-HGVIP------------QAHDIY--MNHRGHV 217
Query: 245 MQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPY 304
+ PG++ PP + SPD S + PP+ + PG+ P
Sbjct: 218 VGAAPGYYMGHPPGSMSPVY--PSPDEYSQHA--HDGTPPAAMM------TPGVHPP--- 264
Query: 305 PGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQ 364
P + + P GP GANLFIYH+P + D +L AF
Sbjct: 265 ------------------PLMVPARPR------EGPAGANLFIYHLPIDLTDADLATAFN 300
Query: 365 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
FG V+SAKV+VD+ TG SK FGFVSY+S +A+ AI MNG Q+G K+LKVQ KR
Sbjct: 301 PFGHVISAKVYVDRYTGESKGFGFVSYDSVMAAELAIEQMNGFQIGNKRLKVQHKR 356
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
+ E E+ +E KLFVGQ+P+ E + +F + + + IIK + A GC F
Sbjct: 85 IEEGDDERDEGDEMAKLFVGQLPREADEDFVRELFTSYGDITGIYIIKKRNNEAKNGCAF 144
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
V R A A++A + L G P++VK+AD + H+ G
Sbjct: 145 VKFRERDMAQAAIDALDGEVHLEGVDKPIRVKFADQNKGQYHHRSMSG 192
>gi|299472576|emb|CBN78228.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 583
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 219/437 (50%), Gaps = 86/437 (19%)
Query: 46 IIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGEL--ERL-- 101
+I+D+ T A RGC F+ +R+ ++AV+ HNK LP A +P+QV+ AD ++ +RL
Sbjct: 2 VIRDRQTDAHRGCAFLTYQTREAGERAVDKFHNKVKLPNAHNPVQVRPADSQMGDDRLGP 61
Query: 102 ---------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYET 152
E+KLF+GMLP + + ++ +FS +G I ++ +R T KGCAF+K+ T
Sbjct: 62 NGRVAPVDRENKLFVGMLPHDADDMTLTEVFSRFGEITEIYCMRNPDGTPKGCAFVKFST 121
Query: 153 KEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSL 212
+ A+AA+EA++ K M+G++ LVVK+AD +K AQ A+ +P P
Sbjct: 122 RSAAIAAIEALHEKCTMDGATRALVVKFADVKK------AQTAKGWM--VP------PDA 167
Query: 213 FGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLS 272
GA P+GY Y+G G G + PG + + R PD +
Sbjct: 168 RGASPLGYNGRYHGGGTSVGGYW--------QATGAPGGRDVY------SKGREVYPDYA 213
Query: 273 SNMGPRNYAMPPSG----FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNS------PGSVS 322
++ G PP G G YP PG P GG + + LN S S+S
Sbjct: 214 NHRGYPYQVGPPGGGYSQSYGPEYPHHPGQ--PQARHGGYVAYSNLNPSHYPAQVDRSLS 271
Query: 323 PAVANSNPSTSSS-----------------------------GGT----GPPGANLFIYH 349
P+ + S + S GG GPPGANLFIYH
Sbjct: 272 PSSGAGDRSHNFSSPPGGPVPGGIGGMGGMRGDGRDSRGEHGGGARPQEGPPGANLFIYH 331
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
+P + D +L AF FG V+SAKVF+DK T SK FGFVSY PA A+ AI+ MNG Q+
Sbjct: 332 LPNDLTDADLATAFAPFGHVVSAKVFLDKRTQESKGFGFVSYNHPAEAEVAISKMNGFQI 391
Query: 410 GGKKLKVQLKRDNKQNK 426
G K+LKVQ K+ + ++
Sbjct: 392 GSKRLKVQHKKADHGDR 408
>gi|260788580|ref|XP_002589327.1| hypothetical protein BRAFLDRAFT_114402 [Branchiostoma floridae]
gi|229274504|gb|EEN45338.1| hypothetical protein BRAFLDRAFT_114402 [Branchiostoma floridae]
Length = 336
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 192/358 (53%), Gaps = 38/358 (10%)
Query: 86 SSPLQVK-------YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS 138
S P+Q+K A+GE E KLF+GM+ K +E++V +F+ YGTI++ +LR
Sbjct: 2 SHPIQMKPANNENRNANGECPVEERKLFVGMVSKKCNESDVRIMFAPYGTIEECTVLRDQ 61
Query: 139 QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
S+GCAF+ + T+ AL A++A++ MEG S PLVVK+ADT+K+++ +R Q+ +Q
Sbjct: 62 NGQSRGCAFVTFSTRASALNAIKALHQSQTMEGCSSPLVVKFADTQKDKEQKRLQQLNAQ 121
Query: 199 ANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPV 258
A + NA + AL Y S G G + P+
Sbjct: 122 AWSQMNALAS----LAALNPQYLALLAAATAANQASAG------------TGSSSAVNPL 165
Query: 259 NQ----GNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL 314
+ GN A L + G + P S G A+ GL M G LG
Sbjct: 166 SSTGAGGNTNTSALSGLGALAGLQGLGTPNSTL---GLQALTGLS-GMGSLNGTLGAATA 221
Query: 315 NNSPGSVSPAVANSNPSTSSSGGT----GPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 370
++ G+ V +P + + G GP GANLFIYH+PQEFGDQ+L F FG V+
Sbjct: 222 LSASGTAGNGV---DPLSQAYSGIQQFAGPEGANLFIYHLPQEFGDQDLMQTFMPFGNVI 278
Query: 371 SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SAKVF+DK T +SKCFGFVSY++P +AQ AI MNG Q+G K+LKVQLKR NKPY
Sbjct: 279 SAKVFIDKQTNLSKCFGFVSYDNPVAAQAAIQAMNGFQIGMKRLKVQLKRPKDANKPY 336
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EER KLFVG V K E+ + MF + ++E +++D+ + SRGC FV +R A
Sbjct: 24 EER-KLFVGMVSKKCNESDVRIMFAPYGTIEECTVLRDQNGQ-SRGCAFVTFSTRASALN 81
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ A H +T+ G SSPL VK+AD + ++ + +L
Sbjct: 82 AIKALHQSQTMEGCSSPLVVKFADTQKDKEQKRL 115
>gi|426331471|ref|XP_004026704.1| PREDICTED: CUGBP Elav-like family member 3-like [Gorilla gorilla
gorilla]
Length = 348
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 181/353 (51%), Gaps = 20/353 (5%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF
Sbjct: 4 PIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 64 VKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIAL 123
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
Q FGA Y+ Q + L PM N +
Sbjct: 124 Q----FGA----YSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIAT 175
Query: 268 --SPDLSSNMGPRNYAMP----PSGFVGSGYPAVPGLQYPMP-----YPGGMLGHRPLNN 316
+P ++ P A P P+ +GY VP P YP G+ +
Sbjct: 176 PITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAAYP 235
Query: 317 SPGS-VSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 375
+ S V+PA GP G N+FIYH+PQEF D E+ F FG V+SAKVF
Sbjct: 236 AAYSLVAPAFPQPPALQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVF 295
Query: 376 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
VD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 296 VDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 348
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 11 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 67
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 68 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 103
>gi|410921168|ref|XP_003974055.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 4 [Takifugu
rubripes]
Length = 471
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 217/424 (51%), Gaps = 34/424 (8%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 75 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 134
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 135 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 194
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 195 CTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRR 254
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
Q+ Q FG A P++ Y +S ++ LMQ + M G
Sbjct: 255 MQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQQQAAIMAASHGG 297
Query: 252 H---GIIPPVNQGNAMRGASPDL--SSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPG 306
+ + P Q + M + + + M P + PP+ S P++ P
Sbjct: 298 YLTPSVAFPATQIHQMGALNINSLPPTPMTPVSGDSPPANITTSAVPSI-----VTPIVN 352
Query: 307 GMLG--HRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQ 364
G G H+P N P +V N P S+ T + Q++
Sbjct: 353 GFTGIPHQP-NGHP-AVETMYTNGLPPYSTQSPTAADTLQQAFTGV-QQYTAIYPATTLT 409
Query: 365 AFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 424
G+ L V + + GFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 410 PIGQTLPQPPQVIQQQQQRE--GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDA 467
Query: 425 NKPY 428
++PY
Sbjct: 468 SRPY 471
>gi|156101369|ref|XP_001616378.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148805252|gb|EDL46651.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 513
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 206/423 (48%), Gaps = 82/423 (19%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK M E QL +F+EF +V EV II+DK T + FV S EAD A+
Sbjct: 88 IKLFIGRVPKTMEEEQLRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIR 147
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPK+++E V +F
Sbjct: 148 SLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSLPKSITEESVKEMF 207
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 208 SPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRFAE 267
Query: 183 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRL 242
+ +Q + +PM L
Sbjct: 268 PKSAKQTQ-------------------------IPM----------------------TL 280
Query: 243 PPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-----AVPG 297
PMQN P V N + +N PR + G G P
Sbjct: 281 QPMQNAAHGMNSQPHVTSPNNINFGQNFGVNNNYPRQVGAWKEYYSGEGRPYYYNEQTNT 340
Query: 298 LQYPMP--YPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFG 355
Q+ MP + +G P N S SS GPPGANLFI+H+P E+
Sbjct: 341 TQWEMPKEFETLFMGSTP------------NMHNLSDSS----GPPGANLFIFHVPNEWH 384
Query: 356 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 415
+L AF FG +LSA++ +K+TG ++ F FVSYES SA AI+ MNG KKLK
Sbjct: 385 QTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAAAAISQMNGFMALNKKLK 444
Query: 416 VQL 418
V +
Sbjct: 445 VTV 447
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK +TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 181 ESGVDQAKLFIGSLPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 240
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+N+ + KKTL G + P++V++A+
Sbjct: 241 ALYAINSLNGKKTLEGCARPVEVRFAE 267
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LFI +P+ +++L F+ FG V + DK T + K FV S + A N
Sbjct: 85 PVSIKLFIGRVPKTMEEEQLRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADN 144
Query: 400 AIAMMNGC-----QLGGKKLK 415
AI +N QLG ++K
Sbjct: 145 AIRSLNNQRTLDPQLGSLQVK 165
>gi|426386618|ref|XP_004059780.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Gorilla
gorilla gorilla]
Length = 370
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 190/387 (49%), Gaps = 66/387 (17%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCAF
Sbjct: 4 PIQVKPADSESRGGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 VKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL----- 118
Query: 208 QHPSLFGALPMGYAPPYNGYG----------YQASGSY---------------------G 236
PSL LP PY+ Y SGSY G
Sbjct: 119 -TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNG 172
Query: 237 LMQYRL--------PPMQNQPGFHGIIPPVNQGNA----MRGASPDLSSNM--GPRNYAM 282
L + PP+ G++ P+ G A G P L + G Y
Sbjct: 173 LPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGGHPALETVYANGLVPYPA 232
Query: 283 PPSGFVGSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+ +PA G+Q Y YP + P+ +S V P GP
Sbjct: 233 QSPTVAETLHPAFSGVQQYTAMYPTAAI--TPIAHS-------VPQPPPLLQQQQREGPE 283
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 284 GCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAI 343
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR PY
Sbjct: 344 QAMNGFQIGMKRLKVQLKRPKDPGHPY 370
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 20 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 78
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 79 LHGSQTMPGASSSLVVKFADTDKERTLRRM 108
>gi|242013336|ref|XP_002427366.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
gi|212511730|gb|EEB14628.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
Length = 382
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 190/371 (51%), Gaps = 42/371 (11%)
Query: 89 LQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFL 148
L + Y + + KLF+GML K SE +V LF +G I++ ILRG + SKGCAF+
Sbjct: 23 LYLFYLIYNMIVTDRKLFVGMLSKQQSEEDVRQLFGPFGAIEECTILRGPEGASKGCAFV 82
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL-PNADS 207
K+ + ++A AA+ ++G M G+S LVVK+ADTEKERQ RR Q+ L P +
Sbjct: 83 KFSSHQEAQAAINNLHGSQTMPGASSSLVVKFADTEKERQLRRMQQMAGNIGLLNPFVFN 142
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIP----PVNQGNA 263
Q + G S L N +G +P P +
Sbjct: 143 QFGAYGAYAQQAALMAAASQGTYISPMAALASQLPHTTLNGQHVNGAMPSLPSPTIPNFS 202
Query: 264 MRGASPD---------LSSNMGPRNY-------AMPPSGFVGS--------GYPAVPGLQ 299
M +P+ + SN P+ Y ++PP G G G P PG+
Sbjct: 203 MAAQTPNGQPGGTEPGVYSNGIPQTYPAYALHLSIPPQGLNGEAALQTAFPGMPPYPGVA 262
Query: 300 YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG--TGPPGANLFIYHIPQEFGDQ 357
+P Y P ++ PA+A S P T G +GP G NLFIYH+PQEFGD
Sbjct: 263 FPAVY----------GQFPQAIPPALA-SVPPTHREGCSISGPEGCNLFIYHLPQEFGDA 311
Query: 358 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 417
EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQ
Sbjct: 312 ELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQ 371
Query: 418 LKRDNKQNKPY 428
LKR N+PY
Sbjct: 372 LKRPKDANRPY 382
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E + +F F ++E I++ AS+GC FV S QEA A+N
Sbjct: 38 KLFVGMLSKQQSEEDVRQLFGPFGAIEECTILRGPEG-ASKGCAFVKFSSHQEAQAAINN 96
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H +T+PGASS L VK+AD E ER
Sbjct: 97 LHGSQTMPGASSSLVVKFADTEKER 121
>gi|399217298|emb|CCF73985.1| unnamed protein product [Babesia microti strain RI]
Length = 432
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 149/437 (34%), Positives = 218/437 (49%), Gaps = 79/437 (18%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV +VPK T+ L+ F F V+EV IIKDKTT A + C FV S +AD AV
Sbjct: 29 IKLFVSRVPKSYTDTDLIPHFVPFGKVEEVTIIKDKTTNAHKLCAFVKMGSIADADSAVR 88
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
A HN K L + LQVKYA GE+ RL + KLFIG +PK ++E ++ +
Sbjct: 89 ALHNIKVLDASLGALQVKYAVGEVARLGLSNANSEPGVDQVKLFIGSVPKTITEEQIKKV 148
Query: 123 FSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F YG ++++ I++ S SKGCAF+K KEQ L A++ +GK ++ S PL V++A
Sbjct: 149 FGEYGQVEEVFIMKDLSTGLSKGCAFVKMSYKEQGLYAIKMADGKLTIDNSK-PLEVRFA 207
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY-------------NGYG 228
+ + ++Q N +P + + GA+ + P +G
Sbjct: 208 EAKGKQQ-----------NAIPGVPIPNIGV-GAMARPFQPGVPRQIGVWREYISPDGRP 255
Query: 229 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 288
Y S GL Q+ +PP + Q G P++ NAM + MPPS
Sbjct: 256 YYFSEQTGLTQWEVPP-EFQMG------PISTVNAM-------------GMHMMPPS--- 292
Query: 289 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT-GPPGANLFI 347
P+ ++ + N+ + P N+ P S+ G GPPGANLFI
Sbjct: 293 -------------TPFDQTVMHMNNITNALYNKQP---NATPCGSNGVGQFGPPGANLFI 336
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
+HIP ++ +L F FG ++SA++ DK TG ++ F FVSY + SA AI MNG
Sbjct: 337 FHIPYDWYYADLVKTFSQFGTIVSARIATDKGTGRNRGFAFVSYSTVESAVKAITCMNGF 396
Query: 408 QLGGKKLKVQLKRDNKQ 424
+ KKLKV +K+ +Q
Sbjct: 397 IIANKKLKVTVKKGEEQ 413
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLF+G VPK +TE Q+ +F E+ V+EV I+KD +T S+GC FV +++ A
Sbjct: 127 DQVKLFIGSVPKTITEEQIKKVFGEYGQVEEVFIMKDLSTGLSKGCAFVKMSYKEQGLYA 186
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
+ K T+ S PL+V++A+ +
Sbjct: 187 IKMADGKLTIDN-SKPLEVRFAEAK 210
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
L KLF+ +PK+ ++ ++ F +G ++++ I++ + K CAF+K + A +A
Sbjct: 27 LSIKLFVSRVPKSYTDTDLIPHFVPFGKVEEVTIIKDKTTNAHKLCAFVKMGSIADADSA 86
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
+ A++ ++ S L VK+A E R S AN+ P D Q G++P
Sbjct: 87 VRALHNIKVLDASLGALQVKYAVGEVARLGL------SNANSEPGVD-QVKLFIGSVP 137
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 322 SPAVANSNPSTSSSGGT-GPP-GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
S V N + +TS+ T PP LF+ +P+ + D +L F FG+V + DK
Sbjct: 6 SSEVDNESLATSTPACTPAPPLSIKLFVSRVPKSYTDTDLIPHFVPFGKVEEVTIIKDKT 65
Query: 380 TGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
T K FV S A A +A+ ++ ++
Sbjct: 66 TNAHKLCAFVKMGSIADADSAVRALHNIKV 95
>gi|348549848|ref|XP_003460745.1| PREDICTED: CUGBP Elav-like family member 5-like [Cavia porcellus]
Length = 424
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 193/393 (49%), Gaps = 67/393 (17%)
Query: 83 PGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT 141
P + P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +
Sbjct: 52 PQMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGS 111
Query: 142 SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANN 201
SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 112 SKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGI 171
Query: 202 LPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSY---------------- 235
L PSL ALP PY+ Y SGSY
Sbjct: 172 L------TPSL--ALPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIG 220
Query: 236 -----GLMQYRL--------PPMQNQPGFHGIIPPVNQGNA----MRGASPDLSSNM--G 276
GL + PP+ G++ P+ G A G P L + G
Sbjct: 221 AVSLNGLPATPVAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGGHPALETVYANG 280
Query: 277 PRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSS 335
Y + +PA G+Q Y YP + P+ +S V P
Sbjct: 281 LVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI--TPIAHS-------VPQPPPLLQQR 331
Query: 336 GGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 395
GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PA
Sbjct: 332 QREGPEGCNLFIYHLPQEFGDMELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPA 391
Query: 396 SAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 392 SAQTAIQAMNGFQIGMKRLKVQLKRPKDLGHPY 424
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 63 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 120
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 121 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 162
>gi|426230734|ref|XP_004009417.1| PREDICTED: CUGBP Elav-like family member 5 [Ovis aries]
Length = 579
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 205/426 (48%), Gaps = 72/426 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 68 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 127
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE-RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 128 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 187
Query: 132 LQILRGSQQTS-----KGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
+LRG ++ GCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KE
Sbjct: 188 CTVLRGPRRARWGGWGAGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKE 247
Query: 187 RQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSY- 235
R RR Q+ Q L PSL LP PY+ Y SGSY
Sbjct: 248 RTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYL 296
Query: 236 --------------------GLMQYRL--------PPMQNQPGFHGIIPPVNQGNA---- 263
GL + PP+ G++ P+ G A
Sbjct: 297 SPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTAAVPGLVAPITNGFAGVVP 356
Query: 264 MRGASPDLSSNM--GPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGS 320
G P L + G Y + +PA G+ QY YP + P+ +S
Sbjct: 357 FPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI--TPIAHS--- 411
Query: 321 VSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 380
V P GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT
Sbjct: 412 ----VPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRAT 467
Query: 381 GVSKCF 386
SKCF
Sbjct: 468 NQSKCF 473
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETK 153
DG + KLF+G +P+N+ E ++ LF +G I +L +L+ KGCAFL Y +
Sbjct: 62 DGTKDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCAR 121
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+ A+ A A++ + + G + P+ VK AD+E
Sbjct: 122 DSAIKAQTALHEQKTLPGMARPIQVKPADSE 152
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 313 PLNNSPGSVSPAVANSNPSTSSSGGTGPPGAN-----------LFIYHIPQEFGDQELGN 361
PL + P V + + PS S G PPG LF+ IP+ +++L
Sbjct: 32 PLRSRPFVV---LMLARPSPVGSSGPEPPGGQPDGTKDLDAIKLFVGQIPRNLDEKDLKP 88
Query: 362 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKR 420
F+ FGR+ V D TG+ K F++Y + SA A A+ L G +Q+K
Sbjct: 89 LFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKP 148
Query: 421 DNKQNK 426
+ +++
Sbjct: 149 ADSESR 154
>gi|383851701|ref|XP_003701370.1| PREDICTED: CUGBP Elav-like family member 4-like [Megachile
rotundata]
Length = 402
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 188/384 (48%), Gaps = 74/384 (19%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+
Sbjct: 36 DRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAIN 95
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL------------------- 202
+++G M G+S +VVK+ADTEKERQ RR Q+ + L
Sbjct: 96 SLHGSQTMPGASSSVVVKFADTEKERQVRRMQQMAGNMSILNPFVFNQFGAYGAYAQQQA 155
Query: 203 -----------------PNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
A Q P +P PP +G G + + P M
Sbjct: 156 ALMAAATAQGTYINPMAALAAGQLPHALNGMPNPIVPPTSGTGTGQPVNGAIPSLPSPTM 215
Query: 246 QN---------------QPG-FHGIIPPVNQGNAMRGASP--DLSSNMGPRNYAMPPSG- 286
N PG + IP G+A+ + P L++ +A SG
Sbjct: 216 PNFNMAAQTPNGQPTGSDPGVYTNGIPQTYAGHALHLSIPAQGLANGDAAIQHAAAYSGI 275
Query: 287 --FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGAN 344
F G YPAV G Q+P P M P S+S GP G N
Sbjct: 276 QPFAGVAYPAVYG-QFPQAIPQPMTAVAPTQREGCSIS----------------GPEGCN 318
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LFIYH+PQ+FGD +L F FG V+S+KVF+D+AT SKCFGFVS+++PASA AI M
Sbjct: 319 LFIYHLPQDFGDSDLMQMFVPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAHAAIQAM 378
Query: 405 NGCQLGGKKLKVQLKRDNKQNKPY 428
NG Q+G K+LKVQLKR N+PY
Sbjct: 379 NGFQIGMKRLKVQLKRPKDTNRPY 402
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ +SRGC FV S QEA A+N+
Sbjct: 38 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSHQEALAAINS 96
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS + VK+AD E ER ++
Sbjct: 97 LHGSQTMPGASSSVVVKFADTEKERQVRRM 126
>gi|431922279|gb|ELK19370.1| CUG-BP- and ETR-3-like factor 5 [Pteropus alecto]
Length = 377
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 186/347 (53%), Gaps = 42/347 (12%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+
Sbjct: 53 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 112
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
A++G M G+S LVVK+ADT+KER RR Q+ Q L PSL LP
Sbjct: 113 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS-- 162
Query: 222 PPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYA 281
PY+ Y + LMQ + + + + P V +S N P
Sbjct: 163 -PYSAY------AQALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPI 213
Query: 282 MPPSGFVGS---GYPAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SP 323
P SG AVPGL P+ P+PGG H L + G V SP
Sbjct: 214 APASGLHSPPLLSTAAVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSP 270
Query: 324 AVANS-NPSTSSSGG-TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATG 381
VA + +P+ S TGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT
Sbjct: 271 TVAETLHPAFSGVQQYTGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATN 330
Query: 382 VSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 331 QSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPRDPGHPY 377
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 55 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 113
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 114 LHGSQTMPGASSSLVVKFADTDKERTLRRM 143
>gi|145306686|gb|ABP57107.1| CUG-BP and ETR-3-like factor 5 [Gallus gallus]
Length = 371
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/381 (37%), Positives = 191/381 (50%), Gaps = 50/381 (13%)
Query: 87 SPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
+P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG SKGC
Sbjct: 2 APIQVKPADSESRGGRDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGC 61
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN----- 200
AF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 62 AFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPS 121
Query: 201 -NLPNAD---------SQHPSLFGALPMGYAPP---YNGYGYQASGSYGLMQYRLPPMQN 247
LP + Q ++ Y P ++ Q G+ L P+
Sbjct: 122 LTLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPAAPIAQ 181
Query: 248 QPGFHGIIPPVNQGNAMRGASPDLSS---------NMGPRNYAMPPSGFV---------- 288
G H PP+ AM G +S+ N P + +GFV
Sbjct: 182 TSGLHS--PPLLGTTAMPGLVAPISNGFTGVVPFPNGHPALETVYTNGFVPYSAQSPSVA 239
Query: 289 GSGYPAVPGL-QYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFI 347
+ +PA G+ QY YP S ++ ++ P GP G NLFI
Sbjct: 240 ETLHPAFSGVQQYAAVYP---------TTSITPIAQSIPQPPPVLQQQQREGPEGCNLFI 290
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
YH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG
Sbjct: 291 YHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGF 350
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR N PY
Sbjct: 351 QIGMKRLKVQLKRPKDANHPY 371
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 9 ADSESRGGRDR-KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKF 66
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 67 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 108
>gi|403276016|ref|XP_003929713.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 146/366 (39%), Positives = 188/366 (51%), Gaps = 50/366 (13%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGQLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
HP+ LP+G Y + + Q L PG G + V A
Sbjct: 119 -HPA---PLPLGACSAY-------TTAILQHQAALLAAAQGPGL-GPVAAVAAQMQHVAA 166
Query: 268 SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS--- 320
+++ + P PP GSG +PGL P P G+ G PL N PGS
Sbjct: 167 FSLVAAPLLPAAANSPP----GSGPGTLPGL----PAPIGINGFGPLTPQTNGQPGSDTL 218
Query: 321 ------------------VSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNA 362
VS A A + GP G NLFIYH+PQEFGD EL
Sbjct: 219 YNNGLSPYPAAYPSAYAPVSTAFAQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQT 278
Query: 363 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 279 FLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPK 338
Query: 423 KQNKPY 428
N+PY
Sbjct: 339 DANRPY 344
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|390478372|ref|XP_002761622.2| PREDICTED: CUGBP Elav-like family member 5 [Callithrix jacchus]
Length = 383
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 187/389 (48%), Gaps = 68/389 (17%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 15 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 74
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 75 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL---- 130
Query: 207 SQHPSLFGALPMGYAPPYNGYG----------YQASGSY--------------------- 235
PSL LP PY+ Y SGSY
Sbjct: 131 --TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLN 183
Query: 236 GLMQYRL--------PPMQNQPGFHGIIPPVNQGNA----MRGASPDLSS----NMGPRN 279
GL + PP+ G++ P+ G A G P L + + P
Sbjct: 184 GLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGGHPALETVYANGLVPYP 243
Query: 280 YAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 339
P P+ QY YP + P+ +S V P G
Sbjct: 244 AQSPTVARDTDILPSPRVQQYTAMYPTAAI--TPIAHS-------VPQPPPLLQQQQREG 294
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 295 PEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQT 354
Query: 400 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR PY
Sbjct: 355 AIQAMNGFQIGMKRLKVQLKRPKDPGHPY 383
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 21 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 78
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 79 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 120
>gi|332844222|ref|XP_003314797.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Pan
troglodytes]
Length = 345
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 185/366 (50%), Gaps = 49/366 (13%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGHLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
HP+ LP+G Y Q G +++ + G + V A
Sbjct: 119 -HPA---PLPLGACGAYTTAILQHQGGLAGSRHKAQDL-------GPVGAVAAQMQHVAA 167
Query: 268 SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS--- 320
+++ + P PP GSG +PGL P P G+ G PL N PGS
Sbjct: 168 FSLVAAPLLPAAANSPP----GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTL 219
Query: 321 ------------------VSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNA 362
VS A + GP G NLFIYH+PQEFGD EL
Sbjct: 220 YNNGLSPYPAAYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQT 279
Query: 363 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 280 FLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK 339
Query: 423 KQNKPY 428
N+PY
Sbjct: 340 DANRPY 345
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|334326938|ref|XP_001363664.2| PREDICTED: CUGBP Elav-like family member 5-like [Monodelphis
domestica]
Length = 545
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 186/378 (49%), Gaps = 45/378 (11%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG SKGCA
Sbjct: 176 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGNSKGCA 235
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN------ 200
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 236 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSL 295
Query: 201 NLPNAD---------SQHPSLFGALPMGYAPP---YNGYGYQASGSYGLMQYRLPPMQNQ 248
LP + Q ++ Y P ++ Q G+ L P+
Sbjct: 296 TLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGIPATPIAPA 355
Query: 249 PGFH-----------GIIPPVNQGNA----MRGASPDLSSNM--GPRNYAMPPSGFVGSG 291
G H G++ P+ G A G P L + G Y +
Sbjct: 356 SGLHSPPLLGTAAVPGLVTPITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPSMAETL 415
Query: 292 YPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
+PA G+Q Y YP + P+ +S GP G NLFIYH+
Sbjct: 416 HPAFSGVQQYTAMYPTAAI--TPIAHS------VPQPPPIIQQQQQREGPEGCNLFIYHL 467
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G
Sbjct: 468 PQEFGDSELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIG 527
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR + PY
Sbjct: 528 MKRLKVQLKRPKDASHPY 545
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 182 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGN-SKGCAFVKF 239
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 240 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 281
>gi|218196668|gb|EEC79095.1| hypothetical protein OsI_19720 [Oryza sativa Indica Group]
Length = 338
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 119/154 (77%), Gaps = 4/154 (2%)
Query: 144 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP 203
GCAFLKYETKEQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+
Sbjct: 178 GCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMS 237
Query: 204 NADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGN 262
N ++ Q SLFGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ F ++ VNQG+
Sbjct: 238 NPNAMQQSSLFGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGS 297
Query: 263 AMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
++RG + +LS N PR++ S +GS Y VP
Sbjct: 298 SIRGVNSELSPNSAPRSFN---STQLGSPYSPVP 328
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 39 ALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGEL 98
AL+ V + ++T GC F+ ++++A A+ A + K + G+S PL VK+AD E
Sbjct: 165 ALLGTVTVHAEET-----GCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEK 219
Query: 99 ERLEHKLFIGML-PKNVSEAEVSALFSIYGTIK 130
ER K P N+S S++G ++
Sbjct: 220 ERQARKAQKAQFHPSNMSNPNAMQQSSLFGAMQ 252
>gi|345478760|ref|XP_001605205.2| PREDICTED: CUGBP Elav-like family member 4-like [Nasonia
vitripennis]
Length = 382
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 195/395 (49%), Gaps = 70/395 (17%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E R + KLF+GML K +E +V LF+ +GTI++ ILRG TS+GCAF
Sbjct: 4 PIQVKPADSE-NRGDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGTSRGCAF 62
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPN--- 204
+K+ T ++A +A+ +++G M G+S LVVK+ADTEKERQ RR Q+ +L N
Sbjct: 63 IKFSTHQEAQSAINSLHGSQTMPGASSSLVVKYADTEKERQLRRMQQMAGNM-SLINPFV 121
Query: 205 ----------------------------------ADSQHPSLFGALPMGYAPPYNGYGYQ 230
A Q P +P PP +G G
Sbjct: 122 FNQFGPYGAYAQQQAALMAAATAQGTYIGPMAALAAGQLPHALNGMPNTVVPPTSGTGTG 181
Query: 231 ASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYA-------MP 283
+ L P M P F+ N A G P + +N P+ YA +P
Sbjct: 182 QPVNGALPSLPSPTM---PNFNMAAQTPNGQPA--GTDPSVYTNGIPQTYAGHALHLSIP 236
Query: 284 PSGFVG-------SGYP---AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTS 333
G +GYP A G+ YP Y G P P ++ S
Sbjct: 237 AQGLPNGEAALQHAGYPGMQAYHGVAYPAVY-----GQFP-QAIPQPMTTVAPQQREGCS 290
Query: 334 SSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 393
SG P G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++
Sbjct: 291 ISG---PEGCNLFIYHLPQEFGDAELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDN 347
Query: 394 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AQ AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 348 QQCAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 382
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K TE + +F F ++E I++ D T SRGC F+ + QEA A+
Sbjct: 19 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGT---SRGCAFIKFSTHQEAQSAI 75
Query: 74 NACHNKKTLPGASSPLQVKYADGELERLEHKL 105
N+ H +T+PGASS L VKYAD E ER ++
Sbjct: 76 NSLHGSQTMPGASSSLVVKYADTEKERQLRRM 107
>gi|359067200|ref|XP_003586320.1| PREDICTED: CUGBP, Elav-like family member 5 [Bos taurus]
Length = 685
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 182/373 (48%), Gaps = 66/373 (17%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+
Sbjct: 333 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 392
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
A++G M G+S LVVK+ADT+KER RR Q+ Q L PSL LP
Sbjct: 393 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS-- 442
Query: 222 PPYNGYG----------YQASGSY---------------------GLMQYRL-------- 242
PY+ Y SGSY GL +
Sbjct: 443 -PYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHS 501
Query: 243 PPMQNQPGFHGIIPPVNQGNA----MRGASPDLSSNM--GPRNYAMPPSGFVGSGYPAVP 296
PP+ G++ P+ G A G P L + G Y + +PA
Sbjct: 502 PPLLGTATVPGLVAPITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFS 561
Query: 297 GLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFG 355
G+Q Y YP + P+ +S V P GP G NLFIYH+PQEFG
Sbjct: 562 GVQQYTAMYPTAAI--TPIAHS-------VPQPPPLLQQQQREGPEGCNLFIYHLPQEFG 612
Query: 356 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 415
D EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LK
Sbjct: 613 DTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLK 672
Query: 416 VQLKRDNKQNKPY 428
VQLKR PY
Sbjct: 673 VQLKRPKDPGHPY 685
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 335 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 393
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 394 LHGSQTMPGASSSLVVKFADTDKERTLRRM 423
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 50 KTTRASR-GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA-----------DGE 97
+ R R GC F+ +R A KA A H +KTLPG P DG
Sbjct: 106 RAIRGHRIGCAFLTYCARDSAIKAQTALHEQKTLPGLLQPRPSPVGSSGPEPPGGQPDGT 165
Query: 98 LERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+ KLF+G +P+N+ E ++ LF +G I +L +L+
Sbjct: 166 KDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLK 204
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGC 58
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T + C
Sbjct: 169 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKDC 214
>gi|332236066|ref|XP_003267226.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Nomascus
leucogenys]
Length = 344
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 186/366 (50%), Gaps = 50/366 (13%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGHLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
HP+ LP+G Y + + Q L PG G + V A
Sbjct: 119 -HPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPGL-GPVAAVAAQMQHVAA 166
Query: 268 SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS--- 320
+++ + P PP GSG A+PGL P P G+ G PL N PGS
Sbjct: 167 FSLVAAPLLPAAANSPP----GSGPGALPGL----PAPIGVNGFGPLTPQTNGQPGSDTL 218
Query: 321 ------------------VSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNA 362
VS A + GP G NLFIYH+PQEFGD EL
Sbjct: 219 YNNGLSPYPAAYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQT 278
Query: 363 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 279 FLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK 338
Query: 423 KQNKPY 428
N+PY
Sbjct: 339 DANRPY 344
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|397496989|ref|XP_003819302.1| PREDICTED: CUGBP Elav-like family member 5 [Pan paniscus]
Length = 433
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 182/373 (48%), Gaps = 66/373 (17%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+
Sbjct: 81 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 140
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
A++G M G+S LVVK+ADT+KER RR Q+ Q L PSL LP
Sbjct: 141 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS-- 190
Query: 222 PPYNGYG----------YQASGSY---------------------GLMQYRL-------- 242
PY+ Y SGSY GL +
Sbjct: 191 -PYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHS 249
Query: 243 PPMQNQPGFHGIIPPVNQGNA----MRGASPDLSSNM--GPRNYAMPPSGFVGSGYPAVP 296
PP+ G++ P+ G A G P L + G Y + +PA
Sbjct: 250 PPLLGTTAVPGLVAPITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFS 309
Query: 297 GLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFG 355
G+Q Y YP + P+ +S V P GP G NLFIYH+PQEFG
Sbjct: 310 GVQQYTAMYPTAAI--TPIAHS-------VPQPPPLLQQQQREGPEGCNLFIYHLPQEFG 360
Query: 356 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 415
D EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LK
Sbjct: 361 DTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLK 420
Query: 416 VQLKRDNKQNKPY 428
VQLKR PY
Sbjct: 421 VQLKRPKDPGHPY 433
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 83 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 141
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 142 LHGSQTMPGASSSLVVKFADTDKERTLRRM 171
>gi|330801309|ref|XP_003288671.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
gi|325081293|gb|EGC34814.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
Length = 348
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 200/406 (49%), Gaps = 80/406 (19%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FVG +P M E + +F +F + ++ IIKDK T S+GC F+ +++EAD A+N
Sbjct: 19 VFVGHIPSSMNEEGVSNIFGKFGNIIDITIIKDKRTNVSKGCAFITFSTKEEADMAINTV 78
Query: 77 HNKKT-LPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
+ T L + PLQVKY+D E+E++E KLFIGML E +V +F +G I++L ++
Sbjct: 79 NESNTFLENMNKPLQVKYSDNEIEKMERKLFIGML-GTADEDQVRQIFGNFGIIEELTVV 137
Query: 136 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKA 195
R KG F+K+ T++++ AL ++ KH + GS++PL+VK+ADT ERQ R+
Sbjct: 138 REKDGKPKGYGFIKFSTRDESENALRELDQKHTVPGSNLPLIVKFADT--ERQKRKKLLG 195
Query: 196 QSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGII 255
Q P P ++ Y Q PP P F+G
Sbjct: 196 Q--------------------PTPQQPSFSFYQQQ------------PPQTGYPFFYG-- 221
Query: 256 PPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLN 315
Q M A G RNY P F GM+ + +
Sbjct: 222 ----QNQQMAQAMN------GYRNYQQPNMNF-------------------GMMQNPAFD 252
Query: 316 NSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 375
S PS S+ +LFIY++P +GD+EL F +G V+S+KVF
Sbjct: 253 YS----QQQNQQQQPSESN---------DLFIYYLPFTYGDEELKQLFSPYGNVVSSKVF 299
Query: 376 VDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 421
+DK T SKCFGFVSY++ SA AI +NG + GKKLKV KR+
Sbjct: 300 IDKNTQQSKCFGFVSYDNTQSAIQAIQELNGRAIEGKKLKVNFKRE 345
>gi|332375404|gb|AEE62843.1| unknown [Dendroctonus ponderosae]
Length = 361
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 189/343 (55%), Gaps = 35/343 (10%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K E +V ALFS GTI++ +LR S+GCAF+ + K AL A++
Sbjct: 38 ERKLFVGMLSKKFCENDVRALFSGVGTIEECTVLRDPAGNSRGCAFVTFSNKHAALLAIK 97
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
+++ MEG S PLVVK+ADT+KE++ +R Q+ Q+ N P+L + P Y+
Sbjct: 98 SLHQSQTMEGCSAPLVVKFADTQKEKELKRHQQMQASVWN----ALATPTL-ASPPQQYS 152
Query: 222 P--PYNGYGYQ---ASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMG 276
P P Q A G L+Q + + N ++ P+ N + L++
Sbjct: 153 PVLPSEATSLQLLQAMGGSALLQQQF--LSNS---ENLLAPIGVQNLV-----TLAAMTQ 202
Query: 277 PRNYAMPP---SGFVGSGYPAVPGLQYPMPYPG---GM---LGHRPLNNSPGSVSPAVAN 327
P A P + +G G G++ + G G+ LG +S GS+
Sbjct: 203 PATAATAPLCMANLLGKG----AGVERTLTAAGLQAGLQSGLGTTTDLSSYGSLITNATL 258
Query: 328 SNPSTSSSGG--TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 385
+ + +++G GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKC
Sbjct: 259 NAAAVAAAGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGPVISAKVFIDKQTNLSKC 318
Query: 386 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FGFVS+++ SAQ AIA MNG Q+G K+LKVQLKR + KPY
Sbjct: 319 FGFVSFDNANSAQQAIAAMNGFQIGTKRLKVQLKRAKEAAKPY 361
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K E + A+F ++E +++D SRGC FV ++ A A+ +
Sbjct: 40 KLFVGMLSKKFCENDVRALFSGVGTIEECTVLRDPAGN-SRGCAFVTFSNKHAALLAIKS 98
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H +T+ G S+PL VK+AD + E+
Sbjct: 99 LHQSQTMEGCSAPLVVKFADTQKEK 123
>gi|401409201|ref|XP_003884049.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
gi|325118466|emb|CBZ54017.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
Length = 678
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 198/440 (45%), Gaps = 74/440 (16%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
+KLFVG+VP+ + E L +F+ F V EV +I+DK T + FV S AD +
Sbjct: 129 EIKLFVGRVPQTVDEDALRPIFEGFGDVREVFVIRDKNTLKHKNSAFVKMASLAAADACI 188
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAE 118
A H+ + L A P+ VKYA GE ERL + KLF+G +P+ +SE E
Sbjct: 189 RALHSNRILDAALGPIIVKYATGEAERLGMHSLGMGGEGGGVDQAKLFVGSIPRTMSEDE 248
Query: 119 VSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177
+ F YGT++++ +++ S T KGCAF+K++ KE+ L A+ +NGKH EG + P+
Sbjct: 249 LRVFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMRNLNGKHIFEGCTRPVE 308
Query: 178 VKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
V++A E +++R Q+ Q N +
Sbjct: 309 VRFA----ESKSQRQQQMAGQHNLGGLGGWGGGGVM------------------------ 340
Query: 238 MQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSG------ 291
Q G G+ R AS SN PR F G
Sbjct: 341 ---------TQAGLSGM---------SRSASTLAGSNANPRQAGQWKEYFAPDGRPYYHN 382
Query: 292 -YPAVPGLQYP-----MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANL 345
Y V + P +P LG + G V + N S GPPGAN+
Sbjct: 383 EYTNVTTWERPPEFDHLPLASLALGGNQASMFSGGVGLHHGSVNSGIGGSETAGPPGANV 442
Query: 346 FIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMN 405
F++HIP E+ +L F FG ++S + VDK + ++ F FVSY++ SA NA+ MN
Sbjct: 443 FVFHIPNEWTKADLIQTFSGFGNIVSCHIAVDKVSHRNRGFAFVSYDNVQSAANAVNHMN 502
Query: 406 GCQLGGKKLKVQLKRDNKQN 425
GC K+L V +K+ + +
Sbjct: 503 GCLAANKRLNVSIKKGEEHH 522
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++ KLFVG +P+ M+E +L F+ + V+EV ++KD T +GC FV ++E A
Sbjct: 231 DQAKLFVGSIPRTMSEDELRVFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHA 290
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER 100
+ + K G + P++V++A+ + +R
Sbjct: 291 MRNLNGKHIFEGCTRPVEVRFAESKSQR 318
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV +P T+A L+ F F + +I DK + +RG FV + Q A AVN
Sbjct: 442 VFVFHIPNEWTKADLIQTFSGFGNIVSCHIAVDKVSHRNRGFAFVSYDNVQSAANAVN-- 499
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKLFI 107
H L A+ L V GE ++H L +
Sbjct: 500 HMNGCL-AANKRLNVSIKKGEEHHVQHLLNV 529
>gi|332255740|ref|XP_003276989.1| PREDICTED: CUGBP Elav-like family member 5 [Nomascus leucogenys]
Length = 438
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 197/414 (47%), Gaps = 47/414 (11%)
Query: 48 KDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGAS----SPLQVKYADGELERLEH 103
+D + +GC F+ +R A KA A H +KTLPG S P+QVK AD E +
Sbjct: 39 EDSSRSGGKGCAFLTYCARDSAIKAQTALHEQKTLPGVSPVWARPIQVKPADSESRGGDR 98
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A+
Sbjct: 99 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHAL 158
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP--------NADSQHPSLFGA 215
+G ++P + +Q + + LP A Q + +
Sbjct: 159 HGSQ-----TMPXXXXXXXXXRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLS 213
Query: 216 LPMGYAPP---YNGYGYQASGSYGLMQYRLPPMQNQPGFH-----------GIIPPVNQG 261
Y P ++ Q G+ L P+ G H G++ P+ G
Sbjct: 214 TSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNG 273
Query: 262 NA----MRGASPDLSSNM--GPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGHRPL 314
A G P L + G Y + +PA G+Q Y YP + P+
Sbjct: 274 FAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI--TPI 331
Query: 315 NNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKV 374
+S V P GP G NLFIYH+PQEFGD EL F FG ++S+KV
Sbjct: 332 AHS-------VPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKV 384
Query: 375 FVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
F+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 385 FMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 438
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 99 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 157
Query: 76 CHNKKTLP 83
H +T+P
Sbjct: 158 LHGSQTMP 165
>gi|146197847|dbj|BAF57635.1| bruno-like protein [Dugesia japonica]
Length = 402
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 184/383 (48%), Gaps = 56/383 (14%)
Query: 84 GASSPLQVKYADGELERL----------------EHKLFIGMLPKNVSEAEVSALFSIYG 127
G PLQVK A L + E KLF+GML KN ++ V +F+ +G
Sbjct: 2 GTRRPLQVKPAKNNLTKKTNMNTLNQLGENIASDERKLFVGMLSKNQTDENVQNMFTKFG 61
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
I++ +L+ SKGCAF+K+ A AA+ A++ KMEG+S LVVK+ADT+K++
Sbjct: 62 KIEECTVLKDQNGNSKGCAFVKFLNHTDARAAINALHASQKMEGASSSLVVKFADTDKQK 121
Query: 188 QARRAQKAQSQAN--------NLPNADSQ-----HPSLFGALPMG-YAPPYNGYGYQASG 233
Q R+ Q+ N ++P SQ +P + A+P + P N Y A
Sbjct: 122 QIRKLQQNLPDLNILNSHIPIHIPYYTSQCGPVINPEMNSAIPTTQFIPNCNEYILAAQI 181
Query: 234 SYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASP------DLSSNMGPRNYAMPPSGF 287
+ +PP I P N +M P + N P+ M
Sbjct: 182 QQINLFSNIPP----------IYPSNSIVSMPSTHPVPMIDYSIPINNLPKTDQMTMKPV 231
Query: 288 VGSGYPAVPGLQYPMPYPGGMLGHRPLNNS----------PGSVSPAVANSNPSTSSSGG 337
+ L P+ PG + + LN ++S NSN S+
Sbjct: 232 LDVQQITQDNLNRPIVTPGSFMSYPFLNVQIPTGYQAAFPNNNLSSINQNSNDVKSTPLP 291
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
TGP G NLFIYH+PQE GD +L F FG V+S+KV+VD+AT SKCFGFVSY+ PA A
Sbjct: 292 TGPEGCNLFIYHLPQEIGDLQLYQIFMHFGNVISSKVYVDRATNQSKCFGFVSYDDPACA 351
Query: 398 QNAIAMMNGCQLGGKKLKVQLKR 420
AI MNG +G K+LKVQLK+
Sbjct: 352 NAAIKSMNGYHIGTKRLKVQLKK 374
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E +S+ER KLFVG + K+ T+ + MF +F ++E ++KD+ S+GC FV +
Sbjct: 30 ENIASDER-KLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQNGN-SKGCAFVKFLNH 87
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+A A+NA H + + GASS L VK+AD + ++ KL
Sbjct: 88 TDARAAINALHASQKMEGASSSLVVKFADTDKQKQIRKL 126
>gi|426379621|ref|XP_004056490.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Gorilla
gorilla gorilla]
Length = 344
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 188/366 (51%), Gaps = 50/366 (13%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q A +L +
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRM---QQMAGHL---GA 117
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
HP+ LP+G Y + + Q L PG G + V A
Sbjct: 118 FHPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPGL-GPVAAVAAQMQHVAA 166
Query: 268 SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS--- 320
+++ + P PP GSG +PGL P P G+ G PL N PGS
Sbjct: 167 FSLVAAPLLPAAANSPP----GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTL 218
Query: 321 ------------------VSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNA 362
VS A + GP G NLFIYH+PQEFGD EL
Sbjct: 219 YNNGLSPYPAAYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQT 278
Query: 363 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 279 FLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK 338
Query: 423 KQNKPY 428
N+PY
Sbjct: 339 DANRPY 344
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|289547743|ref|NP_001166156.1| CUGBP Elav-like family member 6 isoform 3 [Homo sapiens]
gi|194377382|dbj|BAG57639.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 187/366 (51%), Gaps = 50/366 (13%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA+ ++G M G+S LVVK ADT++ER RR Q A +L +
Sbjct: 64 VKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERALRRM---QQMAGHL---GA 117
Query: 208 QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
HP+ LP+G Y + + Q L PG G + V A
Sbjct: 118 FHPA---PLPLGACGAY-------TTAILQHQAALLAAAQGPGL-GPVAAVAAQMQHVAA 166
Query: 268 SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS--- 320
+++ + P PP GSG +PGL P P G+ G PL N PGS
Sbjct: 167 FSLVAAPLLPAAANSPP----GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTL 218
Query: 321 ------------------VSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNA 362
VS A + GP G NLFIYH+PQEFGD EL
Sbjct: 219 YNNGLSPYPAAYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQT 278
Query: 363 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 279 FLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK 338
Query: 423 KQNKPY 428
N+PY
Sbjct: 339 DANRPY 344
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IRGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|327291733|ref|XP_003230575.1| PREDICTED: CUGBP Elav-like family member 5-like, partial [Anolis
carolinensis]
Length = 365
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 181/370 (48%), Gaps = 48/370 (12%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE ++ LF +G I + +LRG SKGCAF+K+ + +A AA+
Sbjct: 1 DRKLFVGMLNKQQSEEDILRLFEPFGAIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIH 60
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP--------------NADS 207
A++G M G+S LVVK+ADT+KER RR Q+ Q L A
Sbjct: 61 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSFALPFSPYGAYAQALM 120
Query: 208 QHPSLFGALPMGYAPPYNGYG---YQASGSYGLMQYRLPPMQNQPGFH-----------G 253
Q ++ A + P + Q G+ L P+ G H G
Sbjct: 121 QQQTVLSASHGNFVSPTLTFSPCHIQQIGTVSLNSLPSSPITQTSGLHSPSLLGSTAVPG 180
Query: 254 IIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSG----------YPAVPGLQ-YPM 302
++ P+ N+ G P + S+ P A+ +G V +PA G+Q Y
Sbjct: 181 LVAPI--ANSFAGVVP-IPSSHHPSLEAVYANGLVPCAAQNPSVGEALHPAFTGVQQYAA 237
Query: 303 PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT----GPPGANLFIYHIPQEFGDQE 358
YP + P+ + P + GP G NLFIYH+PQEFGD E
Sbjct: 238 VYPATAI--TPVAQAIPQPLPIIQQQQQQQQQPQQQQQREGPEGCNLFIYHLPQEFGDNE 295
Query: 359 LGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 418
L F FG ++S+KVF+D+AT SKCFGFVS+++P+SAQ AI MNG Q+G K+LKVQL
Sbjct: 296 LMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQL 355
Query: 419 KRDNKQNKPY 428
KR PY
Sbjct: 356 KRPKDAGHPY 365
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F +DE +++ S+GC FV S EA A++A
Sbjct: 3 KLFVGMLNKQQSEEDILRLFEPFGAIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 61
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 62 LHGSQTMPGASSSLVVKFADTDKERTLRRM 91
>gi|157138640|ref|XP_001664292.1| hypothetical protein AaeL_AAEL014033 [Aedes aegypti]
gi|108869466|gb|EAT33691.1| AAEL014033-PA, partial [Aedes aegypti]
Length = 351
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 138/363 (38%), Positives = 191/363 (52%), Gaps = 51/363 (14%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+GML K +E +V LF+ +GTI++ ILRG SKGCAF+K+ + ++A AA+ +
Sbjct: 2 KLFVGMLSKQQTEEDVRQLFNAFGTIEECTILRGPDGASKGCAFVKFTSHQEAQAAITTL 61
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPP 223
+G M G+S LVVK+ADTEKE R+ ++ Q A H +L P
Sbjct: 62 HGSQTMPGASSSLVVKFADTEKE---RQLRRMQQMAG--------HMNLLSPFVFNQFGP 110
Query: 224 YNGYGYQAS----------GSY----GLMQYRLPPMQNQPG--FHGIIP----PVNQGNA 263
Y Y Q G+Y + ++P N G +G IP P
Sbjct: 111 YGAYAQQQQAALMAAATAQGTYINPMAALATQIPHALNGSGQPVNGTIPSLPSPTMPTFN 170
Query: 264 MRGASPD--------LSSNMGPRNY-------AMPPSGFVGSGYPAVPGLQYP--MPYPG 306
M +P+ + +N P+ Y ++P G + +G A+P YP PYPG
Sbjct: 171 MAAQTPNGQPAGSEAVYTNGIPQTYPGHALHLSIPAQG-LPNGDAALPHAAYPGIQPYPG 229
Query: 307 GMLGHRPLNNSPGSVSPAVANSNPSTSSSGG-TGPPGANLFIYHIPQEFGDQELGNAFQA 365
+ P ++ +A P+ +GP G NLFIYH+PQEFGD EL F
Sbjct: 230 -VAYPAVYGQFPQAIPQPIATIAPAQREGCSISGPEGCNLFIYHLPQEFGDGELMQMFMP 288
Query: 366 FGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 425
FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N
Sbjct: 289 FGTVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDAN 348
Query: 426 KPY 428
+PY
Sbjct: 349 RPY 351
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ AS+GC FV S QEA A+
Sbjct: 2 KLFVGMLSKQQTEEDVRQLFNAFGTIEECTILRGPDG-ASKGCAFVKFTSHQEAQAAITT 60
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD E ER ++
Sbjct: 61 LHGSQTMPGASSSLVVKFADTEKERQLRRM 90
>gi|294884853|gb|ADF47437.1| Bruno 5-like protein [Dugesia japonica]
Length = 381
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 175/349 (50%), Gaps = 40/349 (11%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML KN ++ V +F+ +G I++ +L+ SKGCAF+K+ A AA+
Sbjct: 15 ERKLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQNGNSKGCAFVKFLNHTDARAAIN 74
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN--------NLPNADSQ----- 208
A++ KMEG+S LVVK+ADT+K++Q R+ Q+ N ++P SQ
Sbjct: 75 ALHASQKMEGASSSLVVKFADTDKQKQIRKLQQNLPDLNILNSHIPIHIPYYTSQCGPVI 134
Query: 209 HPSLFGALPMG-YAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGA 267
+P + A+P + P N Y A + +PP I P N +M
Sbjct: 135 NPEMNSAIPTTQFIPNCNEYILAAQIQQINLFSNIPP----------IYPSNSIVSMPST 184
Query: 268 SP------DLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNS---- 317
P + N P+ M + L P+ PG + + LN
Sbjct: 185 HPVPMIDYSIPINNLPKTDQMTMKPVLDVQQITQDNLNRPIVTPGSFMSYPFLNVQIPTG 244
Query: 318 ------PGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLS 371
++S NSN S+ TGP G NLFIYH+PQE GD +L F FG V+S
Sbjct: 245 YQAAFPNNNLSSINQNSNDVKSTPLPTGPEGCNLFIYHLPQEIGDLQLYQIFMHFGNVIS 304
Query: 372 AKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
+KV+VD+AT SKCFGFVSY+ PA A AI MNG +G K+LKVQLK+
Sbjct: 305 SKVYVDRATNQSKCFGFVSYDDPACANAAIKSMNGYHIGTKRLKVQLKK 353
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E +S+ER KLFVG + K+ T+ + MF +F ++E ++KD+ S+GC FV +
Sbjct: 9 ENIASDER-KLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQNGN-SKGCAFVKFLNH 66
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+A A+NA H + + GASS L VK+AD + ++ KL
Sbjct: 67 TDARAAINALHASQKMEGASSSLVVKFADTDKQKQIRKL 105
>gi|289812790|gb|ADD18414.1| RNA-binding protein CUGBP1/BrUNO [Glossina morsitans morsitans]
Length = 706
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 132/196 (67%), Gaps = 1/196 (0%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 291 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 350
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 351 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 409
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I++ +LR SKGCAF+ + TK A++A++ +N MEG + PLVVK+ADT+KE
Sbjct: 410 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKTLNQNKTMEGCTSPLVVKFADTQKE 469
Query: 187 RQARRAQKAQSQANNL 202
++ ++ Q+ Q+ NL
Sbjct: 470 KEQKKIQQIQANLWNL 485
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 43/54 (79%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 392
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS++
Sbjct: 653 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTNLSKCFGFVSFD 706
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 296 PDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 355
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 356 AQDALHNVKTLNGMYHPIQMKPADSENR 383
>gi|74220804|dbj|BAE31371.1| unnamed protein product [Mus musculus]
Length = 440
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/442 (31%), Positives = 221/442 (50%), Gaps = 41/442 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
RR Q+ +Q N + +G L G P Y QA+ S L + +Q
Sbjct: 194 QRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLALLQQATSSSNLGAFS--GIQ 246
Query: 247 NQPGFHGI-----------------IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G + + N + S L + P A P+ G
Sbjct: 247 QMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPV-AASTPNSTAG 305
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSV-SPAVANSNPSTS--SSGGTGPPGANLF 346
+ ++ L G +G +N G++ S A N + ++G G A
Sbjct: 306 AAMNSLTSLGTLQGLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQ 365
Query: 347 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 406
Y Q++ A A + S + ++ S+ GFVSY++P SAQ AI MNG
Sbjct: 366 AYSGIQQY-------AAAALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAIQAMNG 418
Query: 407 CQLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR +KPY
Sbjct: 419 FQIGMKRLKVQLKRSKNDSKPY 440
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|386769533|ref|NP_001246001.1| bruno-2, isoform I [Drosophila melanogaster]
gi|383291459|gb|AFH03675.1| bruno-2, isoform I [Drosophila melanogaster]
Length = 350
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 187/360 (51%), Gaps = 50/360 (13%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 224
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 225 NGYGYQASGSYGLMQYRLPPMQNQPGFHGIIP----PVNQGNAMRGASPDLSSNMGPRNY 280
G + + S +P +Q Q G P P+N A+ S L+ N+ N
Sbjct: 121 AG---RTNPSMAAALAAVPQVQ-QAGSAATAPTTLVPLNSTTAL---SASLTPNLLATNA 173
Query: 281 AMPPSGFVGS-------------------GYPAVPGLQYP------MPYPGGMLGHRPLN 315
A + + GY P P PY + G L
Sbjct: 174 AHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGPPNAADPYSSSLSG---LT 230
Query: 316 NSP--GSVSPAVANSNPSTSSSGGTG-----PPGANLFIYHIPQEFGDQELGNAFQAFGR 368
N G+ S V S +++G TG P G+NLFIYH+PQEF D +L + F FG
Sbjct: 231 NGAAYGAASQPVTTSALQAAAAGVTGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGN 290
Query: 369 VLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
VLSAKVF+DK T +SKCFGFVSY++P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 291 VLSAKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 350
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKALHQSQTME 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|221307768|gb|ACM16743.1| MIP02242p [Drosophila melanogaster]
Length = 350
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 187/360 (51%), Gaps = 50/360 (13%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 224
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 225 NGYGYQASGSYGLMQYRLPPMQNQPGFHGIIP----PVNQGNAMRGASPDLSSNMGPRNY 280
G + + S +P +Q Q G P P+N A+ S L+ N+ N
Sbjct: 121 AG---RTNPSMAAALAAVPQVQ-QAGSAATAPTTLVPLNSTTAL---SASLTPNLLATNA 173
Query: 281 AMPPSGFVGS-------------------GYPAVPGLQYP------MPYPGGMLGHRPLN 315
A + + GY P P PY + G L
Sbjct: 174 AHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGPPNAADPYSSSLSG---LT 230
Query: 316 NSP--GSVSPAVANSNPSTSSSGGTG-----PPGANLFIYHIPQEFGDQELGNAFQAFGR 368
N G+ S V S +++G TG P G+NLFIYH+PQEF D +L + F FG
Sbjct: 231 NGAAYGAASQPVTTSALQAAAAGVTGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGN 290
Query: 369 VLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
VLSAKVF+DK T +SKCFGFVSY++P SA AI M+G Q+G K+LKVQLKR KPY
Sbjct: 291 VLSAKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAVKPY 350
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKALHQSQTME 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|350417598|ref|XP_003491500.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
2-like [Bombus impatiens]
Length = 635
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 107 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 166
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K SE +V +FSIYGTI++
Sbjct: 167 QNALHNVKTFSGMRHPIQMKPADSE-NRNERKLFVGMLSKKFSENDVRNMFSIYGTIEEC 225
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 226 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 286 QQLQTNLWNI 295
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ ASAQ
Sbjct: 546 GPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNAASAQ 605
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 606 AAIQAMNGFQIGMKRLKVQLKRSKDASKPY 635
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +E + MF + ++E ++++D T + S+ C FV S+
Sbjct: 189 DSENRNER-KLFVGMLSKKFSENDVRNMFSIYGTIEECSVLRDSTGK-SKACAFVTFASK 246
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 247 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 106 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 165
Query: 400 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N G + +Q+K + +N+
Sbjct: 166 AQNALHNVKTFSGMRHPIQMKPADSENR 193
>gi|340718155|ref|XP_003397537.1| PREDICTED: CUGBP Elav-like family member 2-like [Bombus terrestris]
Length = 627
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 106 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 165
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K SE +V +FSIYGTI++
Sbjct: 166 QNALHNVKTFSGMRHPIQMKPADSE-NRNERKLFVGMLSKKFSENDVRNMFSIYGTIEEC 224
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 225 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 284
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 285 QQLQTNLWNI 294
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ ASAQ
Sbjct: 538 GPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNAASAQ 597
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 598 AAIQAMNGFQIGMKRLKVQLKRSKDASKPY 627
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +E + MF + ++E ++++D T + S+ C FV S+
Sbjct: 188 DSENRNER-KLFVGMLSKKFSENDVRNMFSIYGTIEECSVLRDSTGK-SKACAFVTFASK 245
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 246 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 284
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 105 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 164
Query: 400 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N G + +Q+K + +N+
Sbjct: 165 AQNALHNVKTFSGMRHPIQMKPADSENR 192
>gi|355755315|gb|EHH59062.1| CUGBP Elav-like family member 5, partial [Macaca fascicularis]
Length = 368
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 187/392 (47%), Gaps = 44/392 (11%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA A H +KTLPG + P+QVK AD E
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR--GGXXXXXXXXXXXXX 58
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
GCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 59 XXXXXXXXXXXXXXXXXXXXXXXXXXXGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 118
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VVK+ADT+KER RR Q+ Q L PSL LP PY+ Y +
Sbjct: 119 VVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQA 161
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYP 293
LMQ + + + + P V +S N P P SG G
Sbjct: 162 LMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTT 219
Query: 294 AVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSSGG 337
AVPGL P+ P+PGG H L + G V SP VA + +P+ S
Sbjct: 220 AVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQ 276
Query: 338 -TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 396
TGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PAS
Sbjct: 277 YTGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPAS 336
Query: 397 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 337 AQAAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 368
>gi|124286791|ref|NP_034290.2| CUGBP Elav-like family member 2 isoform 6 [Mus musculus]
Length = 478
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 218/441 (49%), Gaps = 43/441 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
RR Q+ +Q N + +G L G P Y QA+ S L + +Q
Sbjct: 236 QRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLALLQQATSSSNLGAF--SGIQ 288
Query: 247 NQPGFHGI-----------------IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G + + N + S L + P A P+ G
Sbjct: 289 QMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPV-AASTPNSTAG 347
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTS--SSGGTGPPGANLFI 347
+ ++ L G +G LNN A N + ++G G A
Sbjct: 348 AAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALNGGLGATGLTNGTAGTMDALTQA 404
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
Y Q++ A A + S + ++ S+ GFVSY++P SAQ AI MNG
Sbjct: 405 YSGIQQY-------AAAALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAIQAMNGF 457
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR +KPY
Sbjct: 458 QIGMKRLKVQLKRSKNDSKPY 478
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|410049377|ref|XP_003952740.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Pan
troglodytes]
Length = 369
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 184/359 (51%), Gaps = 41/359 (11%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++
Sbjct: 20 DRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQ 79
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
++G M G+S LVVK ADT++ER RR Q A +L + HP+ LP+G
Sbjct: 80 GLHGSRTMAGASSSLVVKLADTDRERALRRM---QQMAGHL---GAFHPA---PLPLGAC 130
Query: 222 PPYNGYGYQASGSYGLMQYR---LPP-------MQNQPGFHGII-----------PPVNQ 260
Y Q G +++ L P MQ+ F + PP +
Sbjct: 131 GAYTTAILQHQGGLAGSRHKAQDLGPVGAVAAQMQHVAAFSLVAAPLLPAAAANSPPGSG 190
Query: 261 GNAMRGASPDLSSN----MGPRNYAMPPSGFVG----SGYPA-VPGLQYPM--PYPGGML 309
+ G + N + P+ P S + S YPA PG+ P+ Y G
Sbjct: 191 PGTLPGLPAPIGVNGFGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQAYAGMHH 250
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRV 369
++ VS A + GP G NLFIYH+PQEFGD EL F FG V
Sbjct: 251 YAAAYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAV 310
Query: 370 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 311 VSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 369
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 19 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 78 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 110
>gi|348575367|ref|XP_003473461.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Cavia
porcellus]
gi|354467974|ref|XP_003496442.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4
[Cricetulus griseus]
Length = 478
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 218/441 (49%), Gaps = 43/441 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
RR Q+ +Q N + +G L G P Y QA+ S L + +Q
Sbjct: 236 QRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLALLQQATSSSNLGAF--SGIQ 288
Query: 247 NQPGFHGI-----------------IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G + + N + S L + P A P+ G
Sbjct: 289 QMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPV-AASTPNSTAG 347
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTS--SSGGTGPPGANLFI 347
+ ++ L G +G LNN A N + ++G G A
Sbjct: 348 AAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALNGGLGATGLTNGTAGTMDALTQA 404
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
Y Q++ A A + S + ++ S+ GFVSY++P SAQ AI MNG
Sbjct: 405 YSGIQQY-------AAAALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAIQAMNGF 457
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR +KPY
Sbjct: 458 QIGMKRLKVQLKRSKNDSKPY 478
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|237757269|ref|NP_001153764.1| CUGBP Elav-like family member 2 isoform 7 [Mus musculus]
Length = 472
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 218/441 (49%), Gaps = 43/441 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
RR Q+ +Q N + +G L G P Y QA+ S L + +Q
Sbjct: 230 QRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLALLQQATSSSNLGAFS--GIQ 282
Query: 247 NQPGFHGI-----------------IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G + + N + S L + P A P+ G
Sbjct: 283 QMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPV-AASTPNSTAG 341
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTS--SSGGTGPPGANLFI 347
+ ++ L G +G LNN A N + ++G G A
Sbjct: 342 AAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALNGGLGATGLTNGTAGTMDALTQA 398
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
Y Q++ A A + S + ++ S+ GFVSY++P SAQ AI MNG
Sbjct: 399 YSGIQQY-------AAAALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAIQAMNGF 451
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR +KPY
Sbjct: 452 QIGMKRLKVQLKRSKNDSKPY 472
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 130 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 188
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 189 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 228
>gi|380013066|ref|XP_003690591.1| PREDICTED: CUGBP Elav-like family member 2-like [Apis florea]
Length = 582
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 84 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 143
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K +E +V +FS+YGTI++
Sbjct: 144 QNALHNVKTFNGMRHPIQMKPADSE-NRNERKLFVGMLSKKFTENDVRNMFSVYGTIEEC 202
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 203 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 262
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 263 QQLQTNLWNI 272
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ ASAQ
Sbjct: 493 GPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNVASAQ 552
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 553 AAIQAMNGFQIGMKRLKVQLKRSKDASKPY 582
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TE + MF + ++E ++++D T + S+ C FV S+
Sbjct: 166 DSENRNER-KLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGK-SKACAFVTFASK 223
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 224 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 262
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 83 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 142
Query: 400 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N G + +Q+K + +N+
Sbjct: 143 AQNALHNVKTFNGMRHPIQMKPADSENR 170
>gi|328780076|ref|XP_003249751.1| PREDICTED: CUGBP Elav-like family member 2-like [Apis mellifera]
Length = 628
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 107 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 166
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K +E +V +FS+YGTI++
Sbjct: 167 QNALHNVKTFNGMRHPIQMKPADSE-NRNERKLFVGMLSKKFTENDVRNMFSVYGTIEEC 225
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 226 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 286 QQLQTNLWNI 295
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ ASAQ
Sbjct: 539 GPEGCNLFIYHLPQEFSDTDLVSTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNVASAQ 598
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 599 AAIQAMNGFQIGMKRLKVQLKRSKDASKPY 628
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TE + MF + ++E ++++D T + S+ C FV S+
Sbjct: 189 DSENRNER-KLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGK-SKACAFVTFASK 246
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 247 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P + + +L F+ FGRV + DK TG + FV++ + +A +
Sbjct: 106 PDNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALD 165
Query: 400 AI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N G + +Q+K + +N+
Sbjct: 166 AQNALHNVKTFNGMRHPIQMKPADSENR 193
>gi|395539009|ref|XP_003771466.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Sarcophilus
harrisii]
Length = 478
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 218/441 (49%), Gaps = 43/441 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALP--MGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
RR Q+ +Q N + +G L G P Y QA+ S L + +Q
Sbjct: 236 QRRLQQQLAQQMQQLNT-----ATWGNLTGLGGLTPQYLALLQQATSSSNLGAF--SGIQ 288
Query: 247 NQPGFHGI-----------------IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G + + N + S L + P A P+ G
Sbjct: 289 QMAGMNALQLQNLATLAAAAAAAQTSATTTNANPLSTTSSALGALTSPV-AASTPNSTAG 347
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTS--SSGGTGPPGANLFI 347
+ ++ L G +G LNN A N + ++G G A
Sbjct: 348 AAMNSLTSLGTLQGLAGATVG---LNNINALAGMAALNGGLGATGLTNGTAGTMDALTQA 404
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
Y Q++ A A + S + ++ S+ GFVSY++P SAQ AI MNG
Sbjct: 405 YSGIQQY-------AAAALPTLYSQSLLQQQSAAGSQKEGFVSYDNPVSAQAAIQAMNGF 457
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR +KPY
Sbjct: 458 QIGMKRLKVQLKRSKNDSKPY 478
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|357479035|ref|XP_003609803.1| FCA [Medicago truncatula]
gi|355510858|gb|AES92000.1| FCA [Medicago truncatula]
Length = 862
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 145/255 (56%), Gaps = 24/255 (9%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKD+ T +GCCF+ + +EAD+A+
Sbjct: 157 AKLFVGSVPRTATEEDIRPLFEEHGNVVEVALIKDRKTGQHQGCCFIKYATSEEADQAIR 216
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K S EV +FS YG I+D
Sbjct: 217 ALHNRHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASVKEVEEVFSKYGRIED 276
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ++R Q+ S+GC F+KY ++ ALAA+ A+NG + M G PL+V++AD ++ RQ
Sbjct: 277 VYLMRDDQKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQGDS 336
Query: 192 AQKAQSQANNLPNADSQHPSL--FGALPMG-YAPPYNGYGYQASGSYGLMQYRLPPMQN- 247
A A P DS L + PMG + PP N +R P N
Sbjct: 337 RGPAFGSAGFGPRLDSPGTRLPSNNSDPMGDHIPPPNA-------------WRPIPQPNT 383
Query: 248 ----QPGFHGIIPPV 258
GFHG+ PP+
Sbjct: 384 GTSFNAGFHGMGPPL 398
>gi|168041276|ref|XP_001773118.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675665|gb|EDQ62158.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 118/171 (69%), Gaps = 3/171 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ +TE ++ MF E V EV IIKDK T +GCCFV + +EA++A+
Sbjct: 16 VKLFVGSVPRTITEDEVRPMFAEHGNVLEVAIIKDKRTGNQQGCCFVKYSTVEEAERAIR 75
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+KTLPG SP+QV+YADGE ERL EHKLF+G L K SE E+ LF YG + D
Sbjct: 76 ALHNQKTLPGGVSPVQVRYADGERERLGAVEHKLFVGSLNKQASEKEIEELFIPYGRVDD 135
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ I+R Q+ S+GCAF+KY ++ A AA+ A+NG H M+G PL V++AD
Sbjct: 136 VYIMRDEQKQSRGCAFIKYSQRDHAQAAINALNGVHIMQGCDQPLAVRFAD 186
>gi|344248420|gb|EGW04524.1| CUG-BP- and ETR-3-like factor 6 [Cricetulus griseus]
Length = 321
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 174/340 (51%), Gaps = 39/340 (11%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 1 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN--- 225
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 61 MSGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPT---PLPLGACGAYTTAI 111
Query: 226 ------GYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPV-------NQGNAMRGASPDLS 272
G + MQ+ F + P+ + G + GA P L
Sbjct: 112 LQHQAALLAAAQGPGLGQVAAVAAQMQHVAAFSLVAAPLLPTAANTSPGGSGPGALPGLP 171
Query: 273 SNMGPRNY-AMPP--SGFVGSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANS 328
+ MG + ++ P +G GS GL YP YP ++ VS A +
Sbjct: 172 APMGVNGFGSLTPQTNGQPGSDTLYNNGLSPYPAAYP----------SAYAPVSTAFSQQ 221
Query: 329 NPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF 388
+ GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGF
Sbjct: 222 PSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGF 281
Query: 389 VSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
VS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 282 VSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 321
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K E + +F+ F ++E +++ S+GC FV S+ EA A+ H +T+
Sbjct: 4 KQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAAIQGLHGSRTMS 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
GASS L VK AD + ER ++
Sbjct: 63 GASSSLVVKLADTDRERALRRM 84
>gi|209878013|ref|XP_002140448.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556054|gb|EEA06099.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 546
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 215/451 (47%), Gaps = 66/451 (14%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG++P+++ E +L +F+ + V ++I+++K T RG V S +AD A+
Sbjct: 110 IKLFVGRIPRNIEEDELKKLFELYGNVVNISIVREKNTGIHRGAALVTMESIAQADYAIR 169
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+ K L PL+V+Y+ GE ER + KLF+G LPKN++E E+S +
Sbjct: 170 ELNLIKVLDNLRGPLKVQYSTGEAERFGFEAESCIPGVDQVKLFVGALPKNITEEEISDV 229
Query: 123 FSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YG I ++ I+R +GCAF+KY KEQ L A+ +++G + + PL V++A
Sbjct: 230 FSPYGQINEIFIMREIHTGFCRGCAFVKYAFKEQGLYAIASLHGAATLGDVNRPLEVRFA 289
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
S ANNL H S M + PP + +Y + R
Sbjct: 290 ------------SRSSNANNLFLTHGLHHS-----AMAHNPP-------SGSAYHIFNNR 325
Query: 242 LP-PMQNQPGFHGIIPPV------NQGNAMR--------GASPDLSSNMGPRNYAMPPSG 286
P + N + P V ++G+ R G S ++NM PR+ P SG
Sbjct: 326 KPCHIVNDASYLSANPTVVGNILSHRGSCSRNITLFDHNGISVAATTNMYPRSRGHPLSG 385
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLG-----------HRPLNN-SPGSVSPAVANSNPSTSS 334
+ A MP GM H ++ + V P N P S
Sbjct: 386 SPSNSTAAAAITANLMPRCIGMWKEYFTSDGKPYYHNEISRVTQWEVPPEFMNFRP-VFS 444
Query: 335 SGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 394
GPPGAN+FI+++P E+ + L + F FG +LSA + +DK +G +K FVSY+
Sbjct: 445 RQVVGPPGANIFIFNVPYEWEKKSLIHHFCRFGHILSAHLMIDKNSGRNKGVAFVSYDHV 504
Query: 395 ASAQNAIAMMNG-CQLGGKKLKVQLKRDNKQ 424
SA +A+ MNG G+KLKV +K+ +Q
Sbjct: 505 HSAADAVNNMNGFVTESGRKLKVSIKQGQEQ 535
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLFVG +PK++TE ++ +F + ++E+ I+++ T RGC FV +++ A
Sbjct: 208 DQVKLFVGALPKNITEEEISDVFSPYGQINEIFIMREIHTGFCRGCAFVKYAFKEQGLYA 267
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + H TL + PL+V++A
Sbjct: 268 IASLHGAATLGDVNRPLEVRFA 289
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAA 159
+E KLF+G +P+N+ E E+ LF +YG + ++ I+R +G A + E+ QA A
Sbjct: 108 MEIKLFVGRIPRNIEEDELKKLFELYGNVVNISIVREKNTGIHRGAALVTMESIAQADYA 167
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
+ +N ++ PL V+++ E ER A+ +P D Q GALP
Sbjct: 168 IRELNLIKVLDNLRGPLKVQYSTGEAERFGFEAESC------IPGVD-QVKLFVGALP 218
>gi|195117924|ref|XP_002003495.1| GI17944 [Drosophila mojavensis]
gi|193914070|gb|EDW12937.1| GI17944 [Drosophila mojavensis]
Length = 851
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 383 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 442
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLFIGML K ++E +V LF ++
Sbjct: 443 RAALKAQDALHNVKTLSGMYHPIQMKPADSE-NRNERKLFIGMLNKKLNENDVRKLFEVH 501
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 502 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 561
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 562 EKEQKKIQQIQANLWNL 578
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 762 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPESAQ 821
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 822 MAIKSMNGFQVGTKRLKVQLKKPKDASKPY 851
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ EA++ +F YG + + +LR SKGC F+
Sbjct: 379 VTYGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 438
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 439 FYTRRAALKAQDALHNVKTLSGMYHPIQMKPADSENRNERK 479
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 388 PDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 447
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 448 AQDALHNVKTLSGMYHPIQMKPADSENR 475
>gi|116007320|ref|NP_001036356.1| bruno-2, isoform E [Drosophila melanogaster]
gi|442627593|ref|NP_001260411.1| bruno-2, isoform L [Drosophila melanogaster]
gi|113194979|gb|ABI31310.1| bruno-2, isoform E [Drosophila melanogaster]
gi|440213741|gb|AGB92946.1| bruno-2, isoform L [Drosophila melanogaster]
Length = 893
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 509
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 804 GPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 863
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 864 AAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 893
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 403
+F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y + +A A A+
Sbjct: 297 MFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 356
Query: 404 MNGCQLGGKKLKVQLKRDNKQNK 426
N L G +Q+K + +N+
Sbjct: 357 HNIKTLDGMHHPIQMKPADSENR 379
>gi|226503733|ref|NP_001142011.1| uncharacterized protein LOC100274164 [Zea mays]
gi|194706784|gb|ACF87476.1| unknown [Zea mays]
Length = 212
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 134/192 (69%), Gaps = 11/192 (5%)
Query: 204 NADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR-LPPMQNQPGFHGIIPPVNQG 261
NA++ Q S+FG L MGY P YNG+GYQ G+YGLMQY L P+QNQ F ++ PVNQG
Sbjct: 3 NANAMQQNSVFGGLQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQNQAAFQNMVQPVNQG 62
Query: 262 NAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSV 321
+++ GA+ ++S N PR++ S +GS Y +PGLQYP YPGG + HRP ++S S
Sbjct: 63 SSIHGANSEVSPNPVPRSFN---SAQLGSPYSPLPGLQYPGVYPGGPINHRPFSSSHSST 119
Query: 322 SPAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVF 375
+++N +SS GPPGANLFIYHIPQEFGD +L +AF +FGRVLSAKVF
Sbjct: 120 KVQNSSANSPSSSPSSNPGPQIEGPPGANLFIYHIPQEFGDHDLASAFHSFGRVLSAKVF 179
Query: 376 VDKATGVSKCFG 387
VDKATGVSKCFG
Sbjct: 180 VDKATGVSKCFG 191
>gi|195388108|ref|XP_002052732.1| GJ17718 [Drosophila virilis]
gi|194149189|gb|EDW64887.1| GJ17718 [Drosophila virilis]
Length = 738
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 133/198 (67%), Gaps = 2/198 (1%)
Query: 1 MAESKKEKKSSE-ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCC 59
MA+++ K + + +K+FVGQ+PK E +L +F++F V +N+++DK T SRGCC
Sbjct: 262 MADTESAKDQPDADNIKMFVGQIPKTWDELKLRRLFEQFGRVHTLNVLRDKVTSISRGCC 321
Query: 60 FVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEV 119
FV +R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V
Sbjct: 322 FVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKFTEADV 380
Query: 120 SALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK
Sbjct: 381 RQLFTGHGTIEECTVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVK 440
Query: 180 WADTEKERQARRAQKAQS 197
+ADT+KE+ ++ Q+ Q+
Sbjct: 441 FADTQKEKDQKKMQQLQA 458
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 649 GPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 708
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 709 AAIQAMHGFQIGTKRLKVQLKRPKDSGKPY 738
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 403
+F+ IP+ + + +L F+ FGRV + V DK T +S+ FV+Y + +A A A+
Sbjct: 279 MFVGQIPKTWDELKLRRLFEQFGRVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 338
Query: 404 MNGCQLGGKKLKVQLKRDNKQNK 426
N L G +Q+K + +N+
Sbjct: 339 HNIKTLDGMHHPIQMKPADSENR 361
>gi|326505362|dbj|BAK03068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 601
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 130/189 (68%), Gaps = 1/189 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+F GQ+P++M EA+L MF++F V ++N+++DK T S+GCCFV SR+ A A
Sbjct: 35 DAIKMFCGQIPRNMHEAELRDMFEQFGPVFQLNVLRDKQTGESKGCCFVTFYSRKSALDA 94
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN +TL G+ P+Q+K AD E R E KLF+GM+ KN+ E + +LF YGTI+D
Sbjct: 95 QNALHNLRTLNGSHHPIQMKPADTE-NRNERKLFVGMVSKNLDEPNIRSLFQSYGTIEDC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR + S+GCAF+ ++ ++ AL A+++++ MEG S PLVVK+ADT K+++ ++
Sbjct: 154 TVLRDANGKSRGCAFVTFQKRQCALNAIKSMHQSQTMEGCSSPLVVKFADTPKDKETKKI 213
Query: 193 QKAQSQANN 201
Q+ + NN
Sbjct: 214 QQQYTTHNN 222
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/456 (30%), Positives = 207/456 (45%), Gaps = 56/456 (12%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG V K++ E + ++F+ + +++ +++D + SRGC FV R
Sbjct: 117 DTENRNER-KLFVGMVSKNLDEPNIRSLFQSYGTIEDCTVLRDANGK-SRGCAFVTFQKR 174
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL----------FIGMLPKNVSE 116
Q A A+ + H +T+ G SSPL VK+AD ++ K+ + P S
Sbjct: 175 QCALNAIKSMHQSQTMEGCSSPLVVKFADTPKDKETKKIQQQYTTHNNGLMQQFPPGASM 234
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL----EAINGKHKMEGS 172
+ + Y + ++ L QQ K FL AL + + + G+
Sbjct: 235 PNPQHM-NTYNFLPEIGNLVFLQQLFKNYGFLGNNGTALNFGALNNLLQMFSNNMNLNGN 293
Query: 173 SVPLVVK-WADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQA 231
L+ +Q SQ+ N+ D QH L AP N
Sbjct: 294 KPSLLPPPQGPGTSTNMNLSSQHGSSQSINV--QDQQH-----TLTSPRAPAANANNGTY 346
Query: 232 SGSYGLMQYRLPPMQN---QPGFHGIIPPVNQGNAMRGASPDLSS-NMGPRNYAMPPSGF 287
S L+ P N P + PP N +P +++ P AMP S +
Sbjct: 347 SNENSLLMCGAGPYNNGGPSPN-NAAGPPTTHHNQNGALTPAVATPGTNPYTTAMP-SLY 404
Query: 288 VGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG---------- 337
+G P G ++ +NN G + PA + +P+T+SS
Sbjct: 405 TNTGNPLTNGGADAHHNLQSLVAMSQVNN--GGMLPANMHPSPTTNSSTAPQASFPVFPS 462
Query: 338 -------------TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 384
GP GANLFIYH+PQE+ D +L AF ++G+++SAKVFVDK T SK
Sbjct: 463 QSYITAQVAGKHTEGPDGANLFIYHLPQEYNDTDLAQAFASYGQIISAKVFVDKTTNRSK 522
Query: 385 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
CFGFVS+++PASAQ AI MNG Q+G K+LKVQLK+
Sbjct: 523 CFGFVSFDNPASAQAAINQMNGFQIGMKRLKVQLKK 558
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F IP+ + EL + F+ FG V V DK TG SK FV++ S SA +
Sbjct: 34 PDAIKMFCGQIPRNMHEAELRDMFEQFGPVFQLNVLRDKQTGESKGCCFVTFYSRKSALD 93
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 94 AQNALHNLRTLNGSHHPIQMKPADTENR 121
>gi|66802807|ref|XP_635247.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60463542|gb|EAL61727.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 489
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 121/176 (68%), Gaps = 1/176 (0%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVGQ+PK E ++ +F A ++ V++IK+KTT +GC FV PSR+EAD+A+
Sbjct: 3 TKLFVGQIPKSFNEEEIKNLFTNIANIESVSLIKNKTTNEPQGCAFVSVPSREEADRAIE 62
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
HN K G + LQVKYAD E E+L KLF+GMLP++ E ++ LF +G ++D+ I
Sbjct: 63 QLHNSKKFQGVLNNLQVKYADSEQEKLASKLFVGMLPRSYEEEQIRELFEPHGVVEDICI 122
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LRG SKGC F+K++ +E AL+A+ +NG K++GS PLVVK+ADTEK+++ +
Sbjct: 123 LRGPNSESKGCGFIKFDNRESALSAIATLNG-MKLDGSPNPLVVKFADTEKDKKKK 177
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
GP G+NLF+Y+IP F D +L FQ +G V+SAKV+VDK TGVSK FGFVSY++PASA
Sbjct: 398 VGPQGSNLFVYNIPNYFSDNDLLGLFQQYGIVVSAKVYVDKNTGVSKGFGFVSYDNPASA 457
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQ-NKPY 428
AI+ ++G + GKKLKV LK+ + Q ++PY
Sbjct: 458 NLAISNLHGQMMAGKKLKVSLKQTSGQGSQPY 489
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+KK + + LFV +P + ++ LL +F+++ +V + DK T S+G FV
Sbjct: 392 NKKNQSVGPQGSNLFVYNIPNYFSDNDLLGLFQQYGIVVSAKVYVDKNTGVSKGFGFVSY 451
Query: 64 PSRQEADKAVNACH 77
+ A+ A++ H
Sbjct: 452 DNPASANLAISNLH 465
>gi|2148976|gb|AAB58464.1| bruno [Drosophila melanogaster]
Length = 604
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 143 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 202
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 203 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 261
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 262 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 321
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 322 EKEQKKIQQIQANLWNL 338
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 516 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 575
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 576 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 604
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR + SKGC F+
Sbjct: 139 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 198
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 199 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 239
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 148 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 207
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 208 AQDALHNVKTLNGMYHPIQMKPADSENR 235
>gi|195435047|ref|XP_002065513.1| GK15493 [Drosophila willistoni]
gi|194161598|gb|EDW76499.1| GK15493 [Drosophila willistoni]
Length = 866
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 371 EKEPDPDNIKMFVGQVPKSMDETQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 430
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 431 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 489
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 490 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 549
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 550 EKEQKKIQQIQANLWNL 566
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 777 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 836
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 837 VAIKAMNGFQVGTKRLKVQLKKPKDASKPY 866
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E ++ +F YG + + +LR SKGC F+
Sbjct: 367 VTYGEKEPDPDNIKMFVGQVPKSMDETQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 426
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 427 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 467
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 376 PDNIKMFVGQVPKSMDETQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 435
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 436 AQDALHNVKTLNGMYHPIQMKPADSENR 463
>gi|24583877|ref|NP_723739.1| arrest, isoform A [Drosophila melanogaster]
gi|281364913|ref|NP_001162963.1| arrest, isoform E [Drosophila melanogaster]
gi|15291827|gb|AAK93182.1| LD29068p [Drosophila melanogaster]
gi|22946320|gb|AAN10812.1| arrest, isoform A [Drosophila melanogaster]
gi|220945910|gb|ACL85498.1| aret-PA [synthetic construct]
gi|220955600|gb|ACL90343.1| aret-PA [synthetic construct]
gi|272407017|gb|ACZ94249.1| arrest, isoform E [Drosophila melanogaster]
Length = 604
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 143 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 202
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 203 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 261
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 262 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 321
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 322 EKEQKKIQQIQANLWNL 338
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 516 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 575
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 576 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 604
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR + SKGC F+
Sbjct: 139 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 198
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 199 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 239
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 148 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALK 207
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 208 AQDALHNVKTLNGMYHPIQMKPADSENR 235
>gi|442627567|ref|NP_723738.2| arrest, isoform F [Drosophila melanogaster]
gi|440213732|gb|AAN10811.2| arrest, isoform F [Drosophila melanogaster]
Length = 620
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 143 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 202
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 203 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 261
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 262 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 321
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 322 EKEQKKIQQIQANLWNL 338
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 532 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 591
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 592 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 620
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR + SKGC F+
Sbjct: 139 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 198
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 199 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 239
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 148 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALK 207
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 208 AQDALHNVKTLNGMYHPIQMKPADSENR 235
>gi|442627571|ref|NP_001260404.1| arrest, isoform H [Drosophila melanogaster]
gi|442627573|ref|NP_001260405.1| arrest, isoform I [Drosophila melanogaster]
gi|442627575|ref|NP_001260406.1| arrest, isoform J [Drosophila melanogaster]
gi|442627577|ref|NP_001260407.1| arrest, isoform K [Drosophila melanogaster]
gi|440213734|gb|AGB92939.1| arrest, isoform H [Drosophila melanogaster]
gi|440213735|gb|AGB92940.1| arrest, isoform I [Drosophila melanogaster]
gi|440213736|gb|AGB92941.1| arrest, isoform J [Drosophila melanogaster]
gi|440213737|gb|AGB92942.1| arrest, isoform K [Drosophila melanogaster]
Length = 573
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 112 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 171
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 172 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 230
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 231 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 290
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 291 EKEQKKIQQIQANLWNL 307
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 485 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 544
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 545 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 573
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR + SKGC F+
Sbjct: 108 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 167
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 168 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 208
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 117 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALK 176
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 177 AQDALHNVKTLNGMYHPIQMKPADSENR 204
>gi|302818861|ref|XP_002991103.1| hypothetical protein SELMODRAFT_450105 [Selaginella moellendorffii]
gi|300141197|gb|EFJ07911.1| hypothetical protein SELMODRAFT_450105 [Selaginella moellendorffii]
Length = 509
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 132/198 (66%), Gaps = 13/198 (6%)
Query: 1 MAESKKEKKSSEER-------VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR 53
+A K+E+ +S+ VKLFVG VP+ +TE Q+ +MF+E+ V EV IIKD+ T
Sbjct: 21 VAGHKRERDNSDSSEGGQHTYVKLFVGSVPRTITEQQVRSMFEEYGEVLEVAIIKDRRTG 80
Query: 54 ASRG---CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL---EHKLFI 107
+G CCFV SR EAD+A+ +N++TLPG +SP+QV+YADGE ERL EHKLF+
Sbjct: 81 HQQGMFCCCFVKYSSRDEADRAIRCLNNQRTLPGGASPVQVRYADGERERLGAIEHKLFV 140
Query: 108 GMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKH 167
G L K+ SE E+ +FS YG + D+ ++R + S+GCAF+KY +++ A AA+ A+N +
Sbjct: 141 GCLNKHASEREIEEVFSPYGRVDDIYVMRDEHKQSRGCAFIKYPSRDMAQAAIAALNDVY 200
Query: 168 KMEGSSVPLVVKWADTEK 185
M G PL V++AD ++
Sbjct: 201 IMRGCDQPLAVRFADPKR 218
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 313 PLNNSPGSVSPAVA----NSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGR 368
P + P S S VA + S SS GG LF+ +P+ +Q++ + F+ +G
Sbjct: 9 PHHGDPSSSSWRVAGHKRERDNSDSSEGGQHT-YVKLFVGSVPRTITEQQVRSMFEEYGE 67
Query: 369 VLSAKVFVDKATGVSK---CFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLK 419
VL + D+ TG + C FV Y S A AI +N + L G VQ++
Sbjct: 68 VLEVAIIKDRRTGHQQGMFCCCFVKYSSRDEADRAIRCLNNQRTLPGGASPVQVR 122
>gi|2231301|gb|AAB61993.1| testis-specific RNP-type RNA binding protein [Drosophila
melanogaster]
Length = 808
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 347 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 406
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 407 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 465
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 466 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 525
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 526 EKEQKKIQQIQANLWNL 542
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 720 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 779
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 780 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 808
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 343 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 402
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 403 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 443
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 352 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 411
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 412 AQDALHNVKTLNGMYHPIQMKPADSENR 439
>gi|195388102|ref|XP_002052729.1| GJ17715 [Drosophila virilis]
gi|194149186|gb|EDW64884.1| GJ17715 [Drosophila virilis]
Length = 831
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 363 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 422
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 423 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 481
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 482 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 541
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 542 EKEQKKIQQIQANLWNL 558
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 742 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPESAQ 801
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 802 MAIKAMNGFQVGTKRLKVQLKKPKDASKPY 831
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ EA++ +F YG + + +LR SKGC F+
Sbjct: 359 VTYGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 418
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 419 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 459
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 368 PDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 427
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 428 AQDALHNVKTLNGMYHPIQMKPADSENR 455
>gi|194861289|ref|XP_001969750.1| GG23776 [Drosophila erecta]
gi|190661617|gb|EDV58809.1| GG23776 [Drosophila erecta]
Length = 837
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 364 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 423
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 424 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 482
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 483 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 542
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 543 EKEQKKIQQIQANLWNL 559
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 749 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 808
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 809 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 837
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 360 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 419
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 420 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 460
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 369 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 428
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 429 AQDALHNVKTLNGMYHPIQMKPADSENR 456
>gi|195351033|ref|XP_002042041.1| GM26763 [Drosophila sechellia]
gi|194123865|gb|EDW45908.1| GM26763 [Drosophila sechellia]
Length = 816
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 343 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 402
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 403 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 461
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 462 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 521
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 522 EKEQKKIQQIQANLWNL 538
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 728 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 787
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 788 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 816
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 339 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 398
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 399 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 439
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 348 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 407
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 408 AQDALHNVKTLNGMYHPIQMKPADSENR 435
>gi|259089631|gb|ACV91671.1| AT31783p [Drosophila melanogaster]
Length = 810
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 349 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 408
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 409 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 467
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 468 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 527
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 528 EKEQKKIQQIQANLWNL 544
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 722 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 781
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 782 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 810
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 345 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 404
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 405 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 445
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 354 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 413
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 414 AQDALHNVKTLNGMYHPIQMKPADSENR 441
>gi|195351037|ref|XP_002042043.1| GM26785 [Drosophila sechellia]
gi|194123867|gb|EDW45910.1| GM26785 [Drosophila sechellia]
Length = 644
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 305 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 364
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 365 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 423
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 424 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 483
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 484 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 521
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 387 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 444
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 445 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 483
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 403
+F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y + +A A A+
Sbjct: 309 MFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 368
Query: 404 MNGCQLGGKKLKVQLKRDNKQNK 426
N L G +Q+K + +N+
Sbjct: 369 HNIKTLDGMHHPIQMKPADSENR 391
>gi|19921186|ref|NP_609559.1| bruno-2, isoform A [Drosophila melanogaster]
gi|17862264|gb|AAL39609.1| LD19052p [Drosophila melanogaster]
gi|22946323|gb|AAF53181.2| bruno-2, isoform A [Drosophila melanogaster]
gi|220943144|gb|ACL84115.1| bru-2-PA [synthetic construct]
Length = 632
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 509
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 403
+F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y + +A A A+
Sbjct: 297 MFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 356
Query: 404 MNGCQLGGKKLKVQLKRDNKQNK 426
N L G +Q+K + +N+
Sbjct: 357 HNIKTLDGMHHPIQMKPADSENR 379
>gi|24583873|ref|NP_723737.1| arrest, isoform B [Drosophila melanogaster]
gi|442627569|ref|NP_001260403.1| arrest, isoform G [Drosophila melanogaster]
gi|22946318|gb|AAN10810.1| arrest, isoform B [Drosophila melanogaster]
gi|375065944|gb|AFA28453.1| FI19388p1 [Drosophila melanogaster]
gi|440213733|gb|AGB92938.1| arrest, isoform G [Drosophila melanogaster]
Length = 810
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 349 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 408
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 409 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 467
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 468 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 527
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 528 EKEQKKIQQIQANLWNL 544
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 722 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 781
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 782 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 810
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 345 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 404
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 405 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 445
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 354 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALK 413
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 414 AQDALHNVKTLNGMYHPIQMKPADSENR 441
>gi|386769531|ref|NP_001246000.1| bruno-2, isoform G [Drosophila melanogaster]
gi|442627595|ref|NP_723742.2| bruno-2, isoform M [Drosophila melanogaster]
gi|383291458|gb|AFH03674.1| bruno-2, isoform G [Drosophila melanogaster]
gi|440213742|gb|AAF53180.4| bruno-2, isoform M [Drosophila melanogaster]
Length = 664
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 509
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 403
+F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y + +A A A+
Sbjct: 297 MFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 356
Query: 404 MNGCQLGGKKLKVQLKRDNKQNK 426
N L G +Q+K + +N+
Sbjct: 357 HNIKTLDGMHHPIQMKPADSENR 379
>gi|302819965|ref|XP_002991651.1| hypothetical protein SELMODRAFT_451447 [Selaginella moellendorffii]
gi|300140500|gb|EFJ07222.1| hypothetical protein SELMODRAFT_451447 [Selaginella moellendorffii]
Length = 480
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 132/199 (66%), Gaps = 14/199 (7%)
Query: 1 MAESKKEKKSSEER-------VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR 53
+A K+E+ +S+ VKLFVG VP+ +TE Q+ +MF+E+ V EV IIKD+ T
Sbjct: 21 VAGHKRERDNSDSSEGGQHTYVKLFVGSVPRTITEQQVRSMFEEYGEVLEVAIIKDRRTG 80
Query: 54 ASRG---CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL----EHKLF 106
+G CCFV SR EAD+A+ +N++TLPG +SP+QV+YADGE ERL EHKLF
Sbjct: 81 HQQGMFCCCFVKYSSRDEADRAIRCLNNQRTLPGGASPVQVRYADGERERLAGAIEHKLF 140
Query: 107 IGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGK 166
+G L K+ SE E+ +FS YG + D+ ++R + S+GCAF+KY +++ A AA+ A+N
Sbjct: 141 VGCLNKHASEREIEEVFSPYGRVDDIYVMRDEHKQSRGCAFIKYPSRDMAQAAIAALNDV 200
Query: 167 HKMEGSSVPLVVKWADTEK 185
+ M G PL V++AD ++
Sbjct: 201 YIMRGCDQPLAVRFADPKR 219
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 313 PLNNSPGSVSPAVA----NSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGR 368
P + P S S VA + S SS GG LF+ +P+ +Q++ + F+ +G
Sbjct: 9 PHHGDPSSSSWRVAGHKRERDNSDSSEGGQHT-YVKLFVGSVPRTITEQQVRSMFEEYGE 67
Query: 369 VLSAKVFVDKATGVSK---CFGFVSYESPASAQNAIAMMN 405
VL + D+ TG + C FV Y S A AI +N
Sbjct: 68 VLEVAIIKDRRTGHQQGMFCCCFVKYSSRDEADRAIRCLN 107
>gi|195578717|ref|XP_002079210.1| GD23828 [Drosophila simulans]
gi|194191219|gb|EDX04795.1| GD23828 [Drosophila simulans]
Length = 821
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 348 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 407
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 408 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 466
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 467 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 526
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 527 EKEQKKIQQIQANLWNL 543
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 733 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 792
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 793 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 821
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 344 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 403
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 404 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 444
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 353 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 412
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 413 AQDALHNVKTLNGMYHPIQMKPADSENR 440
>gi|195472345|ref|XP_002088461.1| GE18580 [Drosophila yakuba]
gi|194174562|gb|EDW88173.1| GE18580 [Drosophila yakuba]
Length = 830
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 357 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 416
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 417 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 475
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 476 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 535
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 536 EKEQKKIQQIQANLWNL 552
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 742 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 801
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 802 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 830
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 353 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 412
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 413 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 453
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 362 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRRAALK 421
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 422 AQDALHNVKTLNGMYHPIQMKPADSENR 449
>gi|194761400|ref|XP_001962917.1| GF14192 [Drosophila ananassae]
gi|190616614|gb|EDV32138.1| GF14192 [Drosophila ananassae]
Length = 852
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 377 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 436
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 437 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 495
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 496 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 555
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 556 EKEQKKIQQIQANLWNL 572
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 763 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 822
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 823 VAIKAMNGFQVGTKRLKVQLKKPKDASKPY 852
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 373 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 432
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 433 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 473
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 382 PDNIKMFVGQVPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 441
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 442 AQDALHNVKTLNGMYHPIQMKPADSENR 469
>gi|195035643|ref|XP_001989285.1| GH11642 [Drosophila grimshawi]
gi|193905285|gb|EDW04152.1| GH11642 [Drosophila grimshawi]
Length = 833
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 363 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 422
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 423 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 481
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 482 GGIEECTVLRDPNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 541
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 542 EKEQKKIQQIQANLWNL 558
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 744 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPESAQ 803
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 804 MAIKAMNGFQVGTKRLKVQLKKPKDASKPY 833
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ EA++ +F YG + + +LR SKGC F+
Sbjct: 359 VTYGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 418
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 419 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 459
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ +P+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 368 PDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALK 427
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 428 AQDALHNVKTLNGMYHPIQMKPADSENR 455
>gi|324508266|gb|ADY43493.1| CUGBP Elav family member 1-A [Ascaris suum]
Length = 539
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 212/432 (49%), Gaps = 36/432 (8%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +TE + AMF F +++ ++KD + SRGC FV +R
Sbjct: 117 DSENRNER-KLFVGMLNKRLTEEDVKAMFAHFGHIEDCTVLKDSDGK-SRGCAFVTFANR 174
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A +A+ H+ +T+ G S+P+ VK+AD + E+ E K +G P + + +I
Sbjct: 175 SYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEK-EAKKTVG--PS--ASPTLQGTNNIA 229
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP-LVVKWADTEK 185
+I+ Q+L+ +QQ T+ LA L ++GS P ++ +
Sbjct: 230 ASIQ--QLLQSAQQPCLANTNPALGTQLSVLATL--------LQGSGQPNMLSILGNANA 279
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASG-------SYGLM 238
Q ++ A Q L SQ ALP+ P Y A+ ++
Sbjct: 280 LHQQQQQLIAIQQQQRLLELISQQQ--LAALPVQQTPTDLSTAYYAASHPGGVPITFATA 337
Query: 239 QYRLPPMQNQPGFHGIIPPVNQGNAMRG-ASPDLSSNMGPRNYAMPPSGFVGSGYPAVPG 297
P + G P + N + G S +L G A PPS + +
Sbjct: 338 PTESPGLSTASIVQGTSPTEAKANFLLGNGSSNLIQLTGA---AAPPSNYDALQHAYAGI 394
Query: 298 LQYPMPYPG-GMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGD 356
QY +P G + L N + +P ++ +TS GP G NLFIYH+PQ+F D
Sbjct: 395 HQYAAAFPQLATNGQQMLVN---AATPTMSVVTSTTSGGQSKGPDGCNLFIYHLPQDFAD 451
Query: 357 QELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKV 416
+L F FG +LSAKVF+DK T +SKCFGFVSY++ SAQNAIA +NG Q+G K+LKV
Sbjct: 452 SDLVTTFSPFGNILSAKVFIDKQTNLSKCFGFVSYDNAVSAQNAIAALNGFQIGSKRLKV 511
Query: 417 QLKRDNKQNKPY 428
QLKR K +KPY
Sbjct: 512 QLKR-GKDSKPY 522
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 119/179 (66%), Gaps = 1/179 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E + +F++F V ++N+++DKTT+ASRGCCFV R +A A
Sbjct: 35 DTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTFYRRADAIAA 94
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E +V A+F+ +G I+D
Sbjct: 95 QAALHNIRVLPQMHHPVQMKPADSE-NRNERKLFVGMLNKRLTEEDVKAMFAHFGHIEDC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+L+ S S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE++A++
Sbjct: 154 TVLKDSDGKSRGCAFVTFANRSYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEKEAKK 212
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G + A +N ST+ P +F+ IP+ +G+QE F+ FG V V DK
Sbjct: 15 GKLDEQSAQTNASTARE--PDPDTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDK 72
Query: 379 ATGVSKCFGFVSY 391
T S+ FV++
Sbjct: 73 TTQASRGCCFVTF 85
>gi|403276018|ref|XP_003929714.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 342
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 174/365 (47%), Gaps = 68/365 (18%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 1 MLGKQQDEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN--- 225
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 61 MAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGACSAYTTAI 111
Query: 226 --------------GYG--------YQASGSYGLMQY-----------------RLPPMQ 246
G G Q ++ L+ LP +
Sbjct: 112 LQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPPGSGPGTLPGLP 171
Query: 247 NQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPA-VPGLQYPM--P 303
G +G P Q N G+ ++ + P YPA PG+ P+
Sbjct: 172 APIGINGFGPLTPQTNGQPGSDTLYNNGLSP--------------YPAQSPGVADPLQQA 217
Query: 304 YPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAF 363
Y G ++ VS A A + GP G NLFIYH+PQEFGD EL F
Sbjct: 218 YAGMHHYAAAYPSAYAPVSTAFAQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTF 277
Query: 364 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 423
FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 278 LPFGAVVSAKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKD 337
Query: 424 QNKPY 428
N+PY
Sbjct: 338 ANRPY 342
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K E + +F+ F ++E +++ S+GC FV S+ EA A+ H +T+
Sbjct: 4 KQQDEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAAIQGLHGSRTMA 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
GASS L VK AD + ER ++
Sbjct: 63 GASSSLVVKLADTDRERALRRM 84
>gi|390176614|ref|XP_003736147.1| GA25725, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858698|gb|EIM52220.1| GA25725, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 595
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+K+ + +K+FVGQ+PK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 132 DKEPDPDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFFTR 191
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 192 RAALKAQDALHNVKTLAGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 250
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 251 GNIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 310
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 311 EKEQKKIQQIQANLWNL 327
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 506 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 565
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 566 VAIKAMNGFQVGTKRLKVQLKKPKDASKPY 595
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLK 149
V Y+D E + K+F+G +PK++ E+++ +F YG + + +LR + SKGC F+
Sbjct: 128 VTYSDKEPDPDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 187
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 188 FFTRRAALKAQDALHNVKTLAGMYHPIQMKPADSENRNERK 228
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ IP+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 137 PDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFFTRRAALK 196
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 197 AQDALHNVKTLAGMYHPIQMKPADSENR 224
>gi|356521753|ref|XP_003529516.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 737
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 146/251 (58%), Gaps = 16/251 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EAD+A+
Sbjct: 86 AKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIR 145
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K + EV +FS YG ++D
Sbjct: 146 ALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATVKEVEEIFSKYGRVED 205
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ++R ++ S+GC F+KY ++ ALAA+ A+NG + M G PL+V++AD ++ RQ
Sbjct: 206 VYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQGDS 265
Query: 192 AQKAQSQANNLPNAD---SQHPSLFGALPMG-YAPPYNGYGYQASGSYGLMQYRLPPMQN 247
A P D ++HPS PMG PP N + + L + P N
Sbjct: 266 RGLAFGGPGFGPRFDAPGTRHPSNI-TDPMGDRMPPSNAW-------HPLHPPNMGPSSN 317
Query: 248 QPGFHGIIPPV 258
GFHG+ P+
Sbjct: 318 A-GFHGMGSPL 327
>gi|255556436|ref|XP_002519252.1| Flowering time control protein FCA, putative [Ricinus communis]
gi|223541567|gb|EEF43116.1| Flowering time control protein FCA, putative [Ricinus communis]
Length = 811
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ +E + +F++ V EV +IKDK T +GCCFV + +EAD+A+
Sbjct: 161 AKLFVGSVPRTASEEDIRPLFEQHGNVIEVALIKDKRTGQQQGCCFVKYATSEEADRAIR 220
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV++ADGE ERL E+KLF+G L K +E EV +FS YG ++D
Sbjct: 221 ALHNQHTLPGGIGPIQVRFADGERERLGAVEYKLFVGSLNKQATEKEVEEIFSPYGHVED 280
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY ++E ALAA+ A+NG +KM G PL V++AD ++ R
Sbjct: 281 VYLMRDEMKQSRGCGFVKYSSREMALAAINALNGIYKMRGCDQPLTVRFADPKRPR 336
>gi|390176612|ref|XP_002132720.2| GA25725, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858697|gb|EDY70122.2| GA25725, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 818
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+K+ + +K+FVGQ+PK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 355 DKEPDPDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFFTR 414
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 415 RAALKAQDALHNVKTLAGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 473
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 474 GNIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 533
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 534 EKEQKKIQQIQANLWNL 550
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 729 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 788
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 789 VAIKAMNGFQVGTKRLKVQLKKPKDASKPY 818
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y+D E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 351 VTYSDKEPDPDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 410
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 411 FFTRRAALKAQDALHNVKTLAGMYHPIQMKPADSENRNERK 451
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P +F+ IP+ + +L F+ +G V S V DKATG+SK FV++ + +A
Sbjct: 360 PDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFFTRRAALK 419
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ N L G +Q+K + +N+
Sbjct: 420 AQDALHNVKTLAGMYHPIQMKPADSENR 447
>gi|195435051|ref|XP_002065515.1| GK15495 [Drosophila willistoni]
gi|194161600|gb|EDW76501.1| GK15495 [Drosophila willistoni]
Length = 758
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 282 DNIKMFVGQIPKTWDETKLRRMFEQFGHVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 341
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 342 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 400
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 401 TVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 460
Query: 193 QK 194
Q+
Sbjct: 461 QQ 462
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 669 GPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 728
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 729 AAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 758
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 364 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQVGQ-SKGCAFVTFATK 421
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 422 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 460
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 326 ANSNPSTSSSGGTGPPGANL--FIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 383
ANSN T P N+ F+ IP+ + + +L F+ FG V + V DK T +S
Sbjct: 269 ANSNDLTKDQ----PDADNIKMFVGQIPKTWDETKLRRMFEQFGHVHTLNVLRDKVTSIS 324
Query: 384 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
+ FV+Y + +A A A+ N L G +Q+K + +N+
Sbjct: 325 RGCCFVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENR 368
>gi|194861277|ref|XP_001969747.1| GG23780 [Drosophila erecta]
gi|190661614|gb|EDV58806.1| GG23780 [Drosophila erecta]
Length = 646
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 309 DNIKMFVGQIPKTWDETRLRQMFEQFGAVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 368
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 369 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 427
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 428 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 487
Query: 193 QK 194
Q+
Sbjct: 488 QQ 489
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 391 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 448
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 449 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 487
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 403
+F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y + +A A A+
Sbjct: 313 MFVGQIPKTWDETRLRQMFEQFGAVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 372
Query: 404 MNGCQLGGKKLKVQLKRDNKQNK 426
N L G +Q+K + +N+
Sbjct: 373 HNIKTLDGMHHPIQMKPADSENR 395
>gi|224112006|ref|XP_002316051.1| predicted protein [Populus trichocarpa]
gi|222865091|gb|EEF02222.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 150/270 (55%), Gaps = 41/270 (15%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EAD+A+ A
Sbjct: 89 KLFVGSVPRTATEMDIRPLFEEHGNVIEVALIKDKRTGQQQGCCFIKYATSEEADRAIRA 148
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN++TLPG P+QV+YADGE ERL E+KLF+G L K +E EV +F+ YG ++D+
Sbjct: 149 LHNQRTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVEEIFTPYGRVEDV 208
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
++R + S+GC F+KY ++ ALAA+ +NG + M G PL V++AD ++ R
Sbjct: 209 YLMRDEMKQSRGCGFVKYSHRDMALAAINGLNGIYTMRGCEQPLTVRFADPKRPR----- 263
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP-GF 251
P DS+ FG+ P G +QASG R PP P G
Sbjct: 264 ----------PGGDSRGGPAFGS-------PGAGPRFQASG------LRPPPNLGDPMGD 300
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYA 281
H IPP NA SP NMGP + A
Sbjct: 301 H--IPP----NAWLPMSP---QNMGPSSNA 321
>gi|320167253|gb|EFW44152.1| RNA binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 461
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 134/215 (62%), Gaps = 8/215 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E VKLFVGQVP+ M E L +F+EF V E+ I+KD+ +GC F+ SR+ A A
Sbjct: 47 EHVKLFVGQVPRTMEEKDLRPVFEEFGPVVELTILKDRFNGLHKGCAFLTYASRESAQLA 106
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ A H + L G + PLQVK AD E + KLF+GM+ + SE E+ +F +YG I+D+
Sbjct: 107 MAALHGVRVLQGMAHPLQVKPADREEKAEARKLFLGMISRTASEDELRKVFEMYGDIEDI 166
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR TSKGCAF+KY +EQA+AA+ A++G+ M+G PL+VK+ADT++ER ++A
Sbjct: 167 AVLRQPDGTSKGCAFIKYRWREQAVAAISALHGRISMDGCPAPLIVKFADTDRERMQKKA 226
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
QK +L ++ H +GA MG NG+
Sbjct: 227 QK------HLMHSGHHHMGPYGA--MGGMAGMNGF 253
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 332 TSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 391
+++SG G LF+ +P+ +++L F+ FG V+ + D+ G+ K F++Y
Sbjct: 38 SAASGSGGGEHVKLFVGQVPRTMEEKDLRPVFEEFGPVVELTILKDRFNGLHKGCAFLTY 97
Query: 392 ESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNK 426
S SAQ A+A ++G + L G +Q+K +++ K
Sbjct: 98 ASRESAQLAMAALHGVRVLQGMAHPLQVKPADREEK 133
>gi|405963038|gb|EKC28647.1| CUG-BP- and ETR-3-like factor 2 [Crassostrea gigas]
Length = 647
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 125/190 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E L MF+EF V ++N+++DK T S+GCCFV +R+ A A
Sbjct: 64 DAIKMFVGQIPRSMDENDLRKMFEEFGAVYQLNVLRDKATGQSKGCCFVTFYTRKAALDA 123
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT+ G P+Q+K AD E E KLF+GM+ K SE++V +F+ +G+I+D
Sbjct: 124 QNALHNIKTMSGMHHPIQMKPADSEKRNEERKLFVGMISKKCSESDVKMMFAPFGSIEDC 183
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR S+GCAF+ Y ++ AL A++ ++ MEG S P+VVK+ADT+KE++A++
Sbjct: 184 TILRDQNGQSRGCAFVTYANRQSALNAIKNMHHSQTMEGCSSPVVVKFADTQKEKEAKKL 243
Query: 193 QKAQSQANNL 202
Q+ N+
Sbjct: 244 QQINQNLWNI 253
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEF DQ+L F FG V+SAKVF+DK T +SKCFGFVSY++ SAQ
Sbjct: 558 GPDGANLFIYHLPQEFSDQDLMQTFIPFGTVISAKVFIDKQTNLSKCFGFVSYDNALSAQ 617
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 618 AAIQAMNGFQIGMKRLKVQLKRPKSDSKPY 647
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 18/101 (17%)
Query: 304 YPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAF 363
Y G +G R +N V S P P +F+ IP+ + +L F
Sbjct: 42 YSDGEIGTRSMNGQ-------VQKSEPD--------PDAIKMFVGQIPRSMDENDLRKMF 86
Query: 364 QAFGRVLSAKVFVDKATGVSK--CF-GFVSYESPASAQNAI 401
+ FG V V DKATG SK CF F + ++ AQNA+
Sbjct: 87 EEFGAVYQLNVLRDKATGQSKGCCFVTFYTRKAALDAQNAL 127
>gi|195035649|ref|XP_001989288.1| GH11645 [Drosophila grimshawi]
gi|193905288|gb|EDW04155.1| GH11645 [Drosophila grimshawi]
Length = 791
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 132/196 (67%), Gaps = 2/196 (1%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
AE K++ ++ +K+FVGQ+PK E +L +F++F V +N+++DK T SRGCCFV
Sbjct: 301 AELAKDQPDADN-IKMFVGQIPKTWDEIKLRCLFEQFGRVHTLNVLRDKVTSISRGCCFV 359
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSA 121
+R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V
Sbjct: 360 TYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQ 418
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A+++++ MEG S PLVVK+A
Sbjct: 419 LFAGHGTIEECTVLRDQVGQSKGCAFVTFATKQNAIGAIKSLHQSQTMEGCSAPLVVKFA 478
Query: 182 DTEKERQARRAQKAQS 197
DT+KE+ ++ Q+ Q+
Sbjct: 479 DTQKEKDQKKMQQLQA 494
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 702 GPDGSNLFIYHLPQEFTDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 761
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 762 AAIQAMHGFQIGTKRLKVQLKRPRDSGKPY 791
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 403
+F+ IP+ + + +L F+ FGRV + V DK T +S+ FV+Y + +A A A+
Sbjct: 315 MFVGQIPKTWDEIKLRCLFEQFGRVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 374
Query: 404 MNGCQLGGKKLKVQLKRDNKQNK 426
N L G +Q+K + +N+
Sbjct: 375 HNIKTLDGMHHPIQMKPADSENR 397
>gi|195148186|ref|XP_002015055.1| GL18624 [Drosophila persimilis]
gi|194107008|gb|EDW29051.1| GL18624 [Drosophila persimilis]
Length = 764
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 321 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 380
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 381 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 439
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A+++++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 440 TVLRDQAGQSKGCAFVTFATKQNAIGAIKSLHQSQTMEGCSAPLVVKFADTQKEKDQKKM 499
Query: 193 QK 194
Q+
Sbjct: 500 QQ 501
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 675 GPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 734
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 735 AAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 764
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 403 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 460
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ + H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 461 QNAIGAIKSLHQSQTMEGCSAPLVVKFADTQKEKDQKKM 499
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAM 403
+F+ IP+ + + L F+ FG V + V DK T +S+ FV+Y + +A A A+
Sbjct: 325 MFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDAL 384
Query: 404 MNGCQLGGKKLKVQLKRDNKQNK 426
N L G +Q+K + +N+
Sbjct: 385 HNIKTLDGMHHPIQMKPADSENR 407
>gi|356565014|ref|XP_003550740.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 733
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ +E + +F+E V EV +IKDK T +GCCF+ + +EAD+A+
Sbjct: 86 AKLFVGSVPRTASEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIR 145
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K + EV +FS YG ++D
Sbjct: 146 ALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATVKEVEEIFSKYGRVED 205
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
+ ++R ++ S+GC F+KY ++ ALAA+ A+NG + M G PL+V++AD ++ RQ
Sbjct: 206 VYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQ 262
>gi|432858764|ref|XP_004068927.1| PREDICTED: CUGBP Elav-like family member 4-like [Oryzias latipes]
Length = 505
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 123/187 (65%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 48 HDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 107
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G+I++
Sbjct: 108 AQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEE 167
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 168 CTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRR 227
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 228 MQQMAGQ 234
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 58/110 (52%), Gaps = 20/110 (18%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A + P GP G NLFIYH+PQEFGD EL F FG
Sbjct: 416 GQISQAFPHPPPIIPQQQREGPEGCNLFIYHLPQEFGDGELMQMFLPFG----------- 464
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 465 ---------FVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 505
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQNA+
Sbjct: 53 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNAL 112
>gi|60459259|gb|AAX20016.1| FCA gamma [Pisum sativum]
Length = 743
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 146/260 (56%), Gaps = 36/260 (13%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKD+ T +GCCF+ + +EAD+A+
Sbjct: 91 AKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDRKTGQHQGCCFIKYATSEEADQAIR 150
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K EV +FS YG ++D
Sbjct: 151 ALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQALVKEVEEVFSKYGRVED 210
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ++R ++ S+GC F+KY ++ ALAA+ +NG + M G PL+V++AD ++ RQ
Sbjct: 211 VYLMRDDKKQSRGCGFVKYSHRDMALAAINGLNGIYTMRGCDQPLIVRFADPKRPRQ--- 267
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQ-ASGSYGLMQYRLPPMQ---- 246
DS+ P L A G+ P + G + S + M R+PP
Sbjct: 268 -------------GDSRGPVLGAA---GFGPRLDAPGTRLPSNNSDPMGDRMPPPNAWRP 311
Query: 247 -NQP--------GFHGIIPP 257
+QP GFHG+ PP
Sbjct: 312 IHQPNTGPSFNAGFHGMGPP 331
>gi|348508140|ref|XP_003441613.1| PREDICTED: CUGBP Elav-like family member 4-like [Oreochromis
niloticus]
Length = 524
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 123/187 (65%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 48 HDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 107
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G+I++
Sbjct: 108 AQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEE 167
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 168 CTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRR 227
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 228 MQQMAGQ 234
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 75/110 (68%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A + P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 415 GQISQAFPHPPPIIPQQQREGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDR 474
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 475 ATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 524
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQNA+
Sbjct: 53 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNAL 112
>gi|321460482|gb|EFX71524.1| hypothetical protein DAPPUDRAFT_227924 [Daphnia pulex]
Length = 403
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 131/211 (62%), Gaps = 12/211 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E L MF+++ V +VN+++DK + S+GCCFV R++A +A
Sbjct: 12 DAIKMFVGQIPRSMDENDLRKMFEDYGQVHQVNVLRDKISGQSKGCCFVTFYKRKDALQA 71
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N HN KTL G P+Q+K AD E R E KLF+GML K +SE +V +FS YG+I++
Sbjct: 72 QNDMHNIKTLSGMHHPIQMKPADSE-NRNERKLFVGMLSKKISENDVRIMFSAYGSIEEC 130
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR + S+GCAF+ + +++ A+ A++ ++ MEG S P+VVK+ADT+KE+ +R
Sbjct: 131 TVLRDNNNISRGCAFVTFTSRQSAVTAIKTVHHSQTMEGCSSPMVVKFADTQKEKDQKRV 190
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPP 223
S N L+G + + PP
Sbjct: 191 HHVGSTTN-----------LWGGIGINNLPP 210
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEFGD +L AF FG +LSAKVF+DK T +SKCFGFVSY++P S+Q
Sbjct: 314 GPEGSNLFIYHLPQEFGDTDLCQAFSPFGNILSAKVFIDKQTNLSKCFGFVSYDNPMSSQ 373
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 374 AAIQAMNGFQIGTKRLKVQLKRSKDASKPY 403
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K ++E + MF + ++E +++D SRGC FV SR
Sbjct: 94 DSENRNER-KLFVGMLSKKISENDVRIMFSAYGSIEECTVLRDNNN-ISRGCAFVTFTSR 151
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ H+ +T+ G SSP+ VK+AD + E+ + ++
Sbjct: 152 QSAVTAIKTVHHSQTMEGCSSPMVVKFADTQKEKDQKRV 190
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS-YESPASAQ 398
P +F+ IP+ + +L F+ +G+V V DK +G SK FV+ Y+ + Q
Sbjct: 11 PDAIKMFVGQIPRSMDENDLRKMFEDYGQVHQVNVLRDKISGQSKGCCFVTFYKRKDALQ 70
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
M N L G +Q+K + +N+
Sbjct: 71 AQNDMHNIKTLSGMHHPIQMKPADSENR 98
>gi|3927998|emb|CAA77110.1| elav-type RNA-binding protein [Mus musculus]
Length = 484
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 201/432 (46%), Gaps = 45/432 (10%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEKRRLQQQLAQQMQQLNTAT 212
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 213 -----WGNLTGLGEL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 259
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 260 ATLAAAAAAAQTSATSTNANPL----SSTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 315
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 316 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 364
Query: 297 GLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGD 356
G+Q H PL + + V + GP GANLFIYH+PQEFGD
Sbjct: 365 GIQQYAQL------HCPLCTARACCNSRVLQARQKE------GPEGANLFIYHLPQEFGD 412
Query: 357 QELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKV 416
Q++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKV
Sbjct: 413 QDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKV 472
Query: 417 QLKRDNKQNKPY 428
QLKR +KPY
Sbjct: 473 QLKRSKNDSKPY 484
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 122/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
RR
Sbjct: 194 KRR 196
>gi|42476252|ref|NP_571569.2| CUGBP Elav-like family member 3 [Danio rerio]
gi|152013393|sp|Q9IBD1.2|CELF3_DANRE RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|38173873|gb|AAH60923.1| Trinucleotide repeat containing 4 [Danio rerio]
Length = 452
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E R + KLF+GML K +S+A+V +F +G+I++
Sbjct: 65 QNALHEQKTLPGMNRPIQVKPADSE-GRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG SKGCAF+KY++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRM 183
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 184 QQVASQ 189
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 363 GPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQ 422
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 423 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 452
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQNA+
Sbjct: 9 LFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNAL 68
>gi|7670536|dbj|BAA95118.1| Etr-1 [Danio rerio]
Length = 452
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E R + KLF+GML K +S+A+V +F +G+I++
Sbjct: 65 QNALHEQKTLPGMNRPIQVKPADSE-GRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG SKGCAF+KY++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRM 183
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 184 QQVASQ 189
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 363 GPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQ 422
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 423 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 452
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES AQNA+
Sbjct: 9 LFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNAL 68
>gi|449462184|ref|XP_004148821.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
gi|449511891|ref|XP_004164081.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
Length = 675
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 115/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCFV + +EAD+A+
Sbjct: 52 AKLFVGSVPRTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIR 111
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
HN+ TLPG P+QV+YADGE ERL E+KLF+G L K SE EV +FS YG ++D
Sbjct: 112 NLHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVED 171
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY ++ ALAA+ A+NG M G PL V++AD +K R
Sbjct: 172 VYLMRDEMKQSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPR 227
>gi|348527714|ref|XP_003451364.1| PREDICTED: CUGBP Elav-like family member 5-like [Oreochromis
niloticus]
Length = 529
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 137/228 (60%), Gaps = 17/228 (7%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 75 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 134
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 135 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 194
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 195 CTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRR 254
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 255 MQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 285
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 440 GPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQ 499
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 500 AAIQAMNGFQIGMKRLKVQLKRPKDASRPY 529
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 312 RPLNNS-PGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 370
+P+N S P S+ P N + LFI IP+ +++L F+ FG++
Sbjct: 55 KPMNGSEPISIHPESGNMKDQDA---------IKLFIGQIPRNLEEKDLKPLFEQFGKIH 105
Query: 371 SAKVFVDKATGVSKCFGFVSY---ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
V D+ TG+ K F++Y ES AQNA+ L G +Q+K + +++
Sbjct: 106 ELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQK--TLPGMTRPIQVKPADSESR 162
>gi|410921162|ref|XP_003974052.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 1 [Takifugu
rubripes]
Length = 528
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 137/228 (60%), Gaps = 17/228 (7%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 75 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 134
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 135 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 194
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 195 CTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRR 254
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 255 MQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 285
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 439 GPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQ 498
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 499 AAIQAMNGFQIGMKRLKVQLKRPKDASRPY 528
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 312 RPLNNS-PGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 370
+P+N S P S+ P N + LFI IP+ +++L F+ FG++
Sbjct: 55 KPMNGSEPISIHPESGNMKDQDA---------IKLFIGQIPRNLEEKDLKPLFEQFGKIH 105
Query: 371 SAKVFVDKATGVSKCFGFVSY---ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
V D+ TG+ K F++Y ES AQNA+ L G +Q+K + +++
Sbjct: 106 ELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQK--TLPGMTRPIQVKPADSESR 162
>gi|441625924|ref|XP_003257673.2| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Nomascus
leucogenys]
Length = 523
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 141/440 (32%), Positives = 203/440 (46%), Gaps = 58/440 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGC 58
M + EK ++ E KLF+G V K E + MF F ++E I++ D +R + C
Sbjct: 130 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGNSSC 189
Query: 59 CFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAE 118
FV +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + +
Sbjct: 190 AFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNT 249
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
+ +G + L L T + A L+ T L A I +M G + +
Sbjct: 250 AT-----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQ 296
Query: 179 KWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGS 234
A A + + AN L S S GAL P+ + P + G + S
Sbjct: 297 NLATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTS 352
Query: 235 YGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPA 294
G +Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 353 LGTLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQA 401
Query: 295 VPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIY 348
G+Q P Y +L + S + S GP GANLFIY
Sbjct: 402 YSGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIY 443
Query: 349 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 408
H+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q
Sbjct: 444 HLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQ 503
Query: 409 LGGKKLKVQLKRDNKQNKPY 428
+G K+LKVQLKR +KPY
Sbjct: 504 IGMKRLKVQLKRSKNDSKPY 523
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 120/183 (65%), Gaps = 7/183 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKG---CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
I++ +ILRG S+G CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K
Sbjct: 170 IEECRILRGPDGLSRGNSSCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQK 229
Query: 186 ERQ 188
+++
Sbjct: 230 DKE 232
>gi|363744106|ref|XP_003642975.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 445
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
>gi|395822988|ref|XP_003784783.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Otolemur
garnettii]
Length = 448
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
>gi|187761303|ref|NP_001020260.1| CUGBP Elav-like family member 4 isoform 4 [Homo sapiens]
gi|397520310|ref|XP_003830263.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Pan paniscus]
gi|426385816|ref|XP_004059397.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Gorilla
gorilla gorilla]
gi|28279033|gb|AAH45711.1| BRUNOL4 protein [Homo sapiens]
Length = 448
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
>gi|350586085|ref|XP_003127952.3| PREDICTED: CUGBP, Elav-like family member 4 [Sus scrofa]
Length = 448
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
>gi|344269052|ref|XP_003406369.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 3
[Loxodonta africana]
Length = 448
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 121/187 (64%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 111 AQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 170
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 171 CTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRR 230
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 231 MQQMAGQ 237
>gi|443691317|gb|ELT93212.1| hypothetical protein CAPTEDRAFT_183838 [Capitella teleta]
Length = 462
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 120/182 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 15 DAIKLFVGQIPRNLEEKDLRPIFEEFGQIYELTVLKDRFTGMHKGCAFLTYCARDSALKA 74
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE EV +FS YG+I++
Sbjct: 75 QQALHEQKTLPGMNRPIQVKPADSESRAEDRKLFVGMLNKQQSEEEVRQMFSPYGSIEEC 134
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR SKGCAF+K+ T A AA+ A++G M G+S LVVK+ADTEKERQ R+
Sbjct: 135 TILRDQNGNSKGCAFVKFTTHADAQAAINALHGSQTMPGASSSLVVKFADTEKERQLRKM 194
Query: 193 QK 194
Q+
Sbjct: 195 QQ 196
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 74/97 (76%)
Query: 332 TSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 391
T+++ GP G NLFIYH+PQEFGD EL F FG V+SAKV++D+AT SKCFGFVS+
Sbjct: 366 TTTAQKEGPEGCNLFIYHLPQEFGDAELAQMFMPFGNVISAKVYIDRATNQSKCFGFVSF 425
Query: 392 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 426 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
>gi|68303647|ref|NP_001020248.1| CUGBP Elav-like family member 2 isoform 3 [Homo sapiens]
gi|402879611|ref|XP_003903425.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Papio anubis]
gi|426363975|ref|XP_004049102.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Gorilla
gorilla gorilla]
gi|74754421|sp|O95319.1|CELF2_HUMAN RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=Neuroblastoma apoptosis-related
RNA-binding protein; Short=hNAPOR; AltName:
Full=RNA-binding protein BRUNOL-3
gi|152013391|sp|Q5R8Y8.2|CELF2_PONAB RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=RNA-binding protein BRUNOL-3
gi|4249666|gb|AAD13760.1| apoptosis-related RNA binding protein [Homo sapiens]
gi|119606756|gb|EAW86350.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_e [Homo
sapiens]
gi|380808896|gb|AFE76323.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
gi|380808898|gb|AFE76324.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
gi|410349367|gb|JAA41287.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 508
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 236
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 237 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 283
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 284 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 339
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 340 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 388
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 389 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 430
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 431 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 490
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 491 MKRLKVQLKRSKNDSKPY 508
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
>gi|81911882|sp|Q792H5.1|CELF2_RAT RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
Short=Protein ETR-R3; AltName: Full=Neuroblastoma
apoptosis-related RNA-binding protein; Short=rNapor;
AltName: Full=RNA-binding protein BRUNOL-3
gi|81917931|sp|Q9Z0H4.1|CELF2_MOUSE RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
Short=mETR-3; AltName: Full=Neuroblastoma
apoptosis-related RNA-binding protein; Short=mNapor;
AltName: Full=RNA-binding protein BRUNOL-3
gi|4249670|gb|AAD13762.1| apoptosis-related RNA binding protein [Rattus norvegicus]
gi|4249674|gb|AAD13764.1| apoptosis-related RNA binding protein [Mus musculus]
gi|20073073|gb|AAH26856.1| Cugbp2 protein [Mus musculus]
Length = 508
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 236
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 237 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 283
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 284 ATLAAAAAAAQTSATSTNANPL----SSTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 339
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 340 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 388
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 389 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 430
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 431 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 490
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 491 MKRLKVQLKRSKNDSKPY 508
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
>gi|363744110|ref|XP_003642977.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 465
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
>gi|363744101|ref|XP_003642973.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 472
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
>gi|207028397|ref|NP_001128708.1| CUGBP, Elav-like family member 4 [Xenopus laevis]
gi|197359136|gb|ACH69784.1| RNA binding protein Bruno-like 4 [Xenopus laevis]
Length = 471
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 58/110 (52%), Gaps = 20/110 (18%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG
Sbjct: 382 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFG----------- 430
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 431 ---------FVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 471
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 54 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|426241648|ref|XP_004014701.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 2
[Ovis aries]
Length = 551
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 201/441 (45%), Gaps = 70/441 (15%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I+++ SRGC F
Sbjct: 168 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILREPDGL-SRGCAF 226
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ E + L + + + +
Sbjct: 227 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK-EQRRLQQQLAQQMQQLNTA 285
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G
Sbjct: 286 T----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAG--------- 324
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A + Q + A N S S GAL P+ + P + G + S G
Sbjct: 325 ------MNALQLQNLATLAGLXANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 378
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRG---ASPDLSSNMGPRNYAMPPSGFVGSGYP 293
+Q G G +N NA+ G + L+ +G +G + +
Sbjct: 379 TLQ----------GLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQ 428
Query: 294 AVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFI 347
A G+Q P Y +L + S + S GP GANLFI
Sbjct: 429 AYSGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFI 470
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
YH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG
Sbjct: 471 YHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGF 530
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR +KPY
Sbjct: 531 QIGMKRLKVQLKRSKNDSKPY 551
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 88 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 147
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 148 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 207
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILR S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 208 IEECRILREPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 267
>gi|159032035|ref|NP_001103700.1| CUGBP Elav-like family member 2 isoform 3 [Mus musculus]
gi|74227938|dbj|BAE37963.1| unnamed protein product [Mus musculus]
Length = 520
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 130 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 188
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 189 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 248
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 249 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 295
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 296 ATLAAAAAAAQTSATSTNANPL----SSTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 351
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 352 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 400
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 401 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 442
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 443 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 502
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 503 MKRLKVQLKRSKNDSKPY 520
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
>gi|195546832|ref|NP_001124260.1| CUGBP Elav-like family member 5 [Danio rerio]
gi|190339155|gb|AAI63416.1| Brunol5 protein [Danio rerio]
Length = 528
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 137/228 (60%), Gaps = 17/228 (7%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 75 QDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIK 134
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I++
Sbjct: 135 AQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEE 194
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 195 CTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRR 254
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
Q+ Q FG A P++ Y ++ ++ LMQ
Sbjct: 255 MQQMVGQ--------------FGIFNPAIALPFSTY---STYAHALMQ 285
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 439 GPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQ 498
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 499 AAIQAMNGFQIGMKRLKVQLKRPKDASRPY 528
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQNA+
Sbjct: 80 LFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNAL 139
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNK 426
L G +Q+K + +++
Sbjct: 140 HEQK--TLPGMTRPIQVKPADSESR 162
>gi|387542960|gb|AFJ72107.1| CUGBP Elav-like family member 4 isoform 4 [Macaca mulatta]
Length = 447
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 121/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAI 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQTALHEQKTLPGMARPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
>gi|75075903|sp|Q4R535.1|CELF4_MACFA RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|67970896|dbj|BAE01790.1| unnamed protein product [Macaca fascicularis]
Length = 474
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
>gi|348575361|ref|XP_003473458.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Cavia
porcellus]
Length = 526
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 254
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 255 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 301
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 302 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 357
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 358 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 406
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 407 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 448
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 449 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 508
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 509 MKRLKVQLKRSKNDSKPY 526
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
>gi|189241911|ref|XP_971057.2| PREDICTED: similar to bruno-3 CG12478-PA [Tribolium castaneum]
Length = 569
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 123/189 (65%), Gaps = 1/189 (0%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ + + +KLFVGQ+P+H+ E L MF+EF + E ++KDK T +GC F+ S
Sbjct: 116 QANGNRDVIKLFVGQIPRHLEEDDLRPMFEEFGKIYEFTVLKDKYTGMHKGCAFLTYFSP 175
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSI 125
+ A A NA H K TLPG + P+QVK AD E + KLF+GML K +E +V LF+
Sbjct: 176 ESALNAQNALHEKHTLPGMNRPIQVKPADSENRGGKDRKLFVGMLSKQQTEEDVRQLFAP 235
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+GTI++ ILRG SKGCAF+KY + ++A AA+ +++G M G+S LVVK+ADTEK
Sbjct: 236 FGTIEECTILRGPDGASKGCAFVKYSSHQEAQAAINSLHGSQTMPGASSSLVVKFADTEK 295
Query: 186 ERQARRAQK 194
ERQ RR Q+
Sbjct: 296 ERQLRRMQQ 304
>gi|410225362|gb|JAA09900.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263776|gb|JAA19854.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305934|gb|JAA31567.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305938|gb|JAA31569.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349361|gb|JAA41284.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349363|gb|JAA41285.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 515
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 125 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 183
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 184 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 243
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 244 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 290
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 291 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 346
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 347 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 395
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 396 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 437
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 438 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 497
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 498 MKRLKVQLKRSKNDSKPY 515
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
>gi|348529973|ref|XP_003452486.1| PREDICTED: CUGBP Elav-like family member 3-like [Oreochromis
niloticus]
Length = 453
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 127/186 (68%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E + KLF+GML K ++A+V +F +G+I++
Sbjct: 65 QNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+AD+EKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSNAEAQAAINALHGSRTLPGASSSLVVKFADSEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVASQ 190
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ
Sbjct: 364 GPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQ 423
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 424 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 453
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+A + MF+ F ++E +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 SNAEAQAAINALHGSRTLPGASSSLVVKFADSEKER 179
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALK 63
Query: 397 AQNAI 401
AQNA+
Sbjct: 64 AQNAL 68
>gi|159032039|ref|NP_001103702.1| CUGBP Elav-like family member 2 isoform 5 [Mus musculus]
gi|4249672|gb|AAD13763.1| apoptosis-related RNA binding protein [Mus musculus]
gi|120538103|gb|AAI29097.1| Cugbp2 protein [Rattus norvegicus]
Length = 484
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 212
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 213 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 259
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 260 ATLAAAAAAAQTSATSTNANPL----SSTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 315
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 316 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 364
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 365 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 406
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 407 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 466
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 467 MKRLKVQLKRSKNDSKPY 484
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
>gi|332849799|ref|XP_512100.3| PREDICTED: CUGBP, Elav-like family member 4 [Pan troglodytes]
gi|194379036|dbj|BAG58069.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|197100912|ref|NP_001126925.1| CUGBP Elav-like family member 2 isoform 2 [Pongo abelii]
gi|55733179|emb|CAH93273.1| hypothetical protein [Pongo abelii]
Length = 484
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 212
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 213 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 259
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 260 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 315
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 316 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 364
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 365 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 406
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 407 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 466
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 467 MKRLKVQLKRSKNDSKPY 484
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVSFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
>gi|159032031|ref|NP_001103698.1| CUGBP Elav-like family member 2 isoform 1 [Mus musculus]
gi|237757271|ref|NP_001153765.1| CUGBP Elav-like family member 2 isoform 1 [Mus musculus]
gi|285026421|ref|NP_001077055.2| CUGBP Elav-like family member 2 isoform 2 [Rattus norvegicus]
gi|148676041|gb|EDL07988.1| CUG triplet repeat, RNA binding protein 2 [Mus musculus]
gi|149021034|gb|EDL78641.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Rattus
norvegicus]
gi|149021035|gb|EDL78642.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Rattus
norvegicus]
Length = 526
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 254
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 255 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 301
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 302 ATLAAAAAAAQTSATSTNANPL----SSTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 357
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 358 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 406
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 407 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 448
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 449 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 508
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 509 MKRLKVQLKRSKNDSKPY 526
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
>gi|380808892|gb|AFE76321.1| CUGBP Elav-like family member 2 isoform 2 [Macaca mulatta]
Length = 515
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 125 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 183
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 184 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 243
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 244 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 290
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 291 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 346
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 347 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 395
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 396 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 437
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 438 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 497
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 498 MKRLKVQLKRSKNDSKPY 515
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
>gi|395510718|ref|XP_003759619.1| PREDICTED: CUGBP Elav-like family member 4-like [Sarcophilus
harrisii]
Length = 453
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 49 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHVEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 43/69 (62%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 384 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDR 443
Query: 379 ATGVSKCFG 387
AT SKCFG
Sbjct: 444 ATNQSKCFG 452
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 314 LNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAK 373
LN+SPG NPST LFI IP+ +++L F+ FG++
Sbjct: 35 LNHSPG---------NPSTIPMKDHD--AIKLFIGQIPRNLDEKDLKPLFEEFGKIYELT 83
Query: 374 VFVDKATGVSKCFGFVSY---ESPASAQNAI 401
V D+ TG+ K F++Y ES AQ+A+
Sbjct: 84 VLKDRFTGMHKGCAFLTYCERESALKAQSAL 114
>gi|402879613|ref|XP_003903426.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Papio anubis]
gi|426363973|ref|XP_004049101.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Gorilla
gorilla gorilla]
gi|14701777|gb|AAK72223.1| neuroplastoma apoptosis-related RNA-binding protein 3 [Homo
sapiens]
gi|194390100|dbj|BAG61812.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 212
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 213 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 259
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 260 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 315
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 316 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 364
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 365 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 406
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 407 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 466
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 467 MKRLKVQLKRSKNDSKPY 484
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
>gi|183637597|gb|ACC64599.1| trinucleotide repeat containing 4 (predicted) [Rhinolophus
ferrumequinum]
Length = 459
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVASQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 370 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 429
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 430 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 459
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|50540190|ref|NP_001002562.1| CUGBP Elav-like family member 4 [Danio rerio]
gi|82235921|sp|Q6DGV1.1|CELF4_DANRE RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|49904554|gb|AAH76238.1| Zgc:92761 [Danio rerio]
Length = 520
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 121/187 (64%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 44 HDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 103
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A A H +KTLPG + P+QVK AD E + KLF+GML K E +V LF +G+I++
Sbjct: 104 AQTALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIEE 163
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY T +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 164 CTILRGPDGNSKGCAFVKYSTHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRR 223
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 224 MQQMAGQ 230
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 74/110 (67%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 411 GQISQAFPQPPPIIPQQQREGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDR 470
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 471 ATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 520
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ A+
Sbjct: 49 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTAL 108
>gi|395827353|ref|XP_003786869.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Otolemur
garnettii]
Length = 488
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 202/441 (45%), Gaps = 59/441 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 212
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 213 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 259
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 260 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 315
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRG---ASPDLSSNMGPRNYAMPPSGFVGSGYP 293
+Q G G +N NA+ G + L+ +G +G + +
Sbjct: 316 TLQ----------GLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQ 365
Query: 294 AVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFI 347
A G+Q P Y +L + S + S GP GANLFI
Sbjct: 366 AYSGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFI 407
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
YH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG
Sbjct: 408 YHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGF 467
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR +KPY
Sbjct: 468 QIGMKRLKVQLKRSKNDSKPY 488
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
>gi|281345849|gb|EFB21433.1| hypothetical protein PANDA_019092 [Ailuropoda melanoleuca]
Length = 512
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/456 (31%), Positives = 204/456 (44%), Gaps = 71/456 (15%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 100 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 158
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 159 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 218
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G+ +
Sbjct: 219 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGNK-----EG 260
Query: 181 ADTEKERQARRAQKAQSQANNLPNAD--SQHPSLFGAL--PMGYAPPYN--GYGYQASGS 234
+ A + + S NA+ S S GAL P+ + P + G + S
Sbjct: 261 KQFARSPTAGKVAEPGSHGTTTTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTS 320
Query: 235 YGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPA 294
G +Q G G +N NA+ G +++ + PRN + F G
Sbjct: 321 LGTLQ----------GLAGATVGLNNINALAGT---INTLLRPRNSDLLLKEFSGC---- 363
Query: 295 VPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANS----------------------NPST 332
M G LG L N A+ + S
Sbjct: 364 -------MAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSA 416
Query: 333 SSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 392
+ S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY+
Sbjct: 417 AGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD 476
Query: 393 SPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 20 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 80 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 139
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 140 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 199
>gi|149944693|ref|NP_001092538.1| CUGBP Elav-like family member 4 [Bos taurus]
gi|148878073|gb|AAI46143.1| BRUNOL4 protein [Bos taurus]
gi|296473867|tpg|DAA15982.1| TPA: CUG-BP- and ETR-3-like factor 4 [Bos taurus]
Length = 475
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
>gi|410963195|ref|XP_003988151.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Felis catus]
Length = 484
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 200/436 (45%), Gaps = 53/436 (12%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 212
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 213 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 259
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYNGYGYQASGSYGLM 238
A A + + AN L S S GAL P+ + P + S G
Sbjct: 260 ATLAAAAAAAQTSATTTNANPL----STTSSALGALTSPVAASTP--------NSSAGAA 307
Query: 239 QYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGL 298
L + G G +N NA+ G + L+ +G +G + + A G+
Sbjct: 308 MNSLTSLGTLQGLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYSGI 366
Query: 299 Q------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQ 352
Q P Y +L + S + S GP GANLFIYH+PQ
Sbjct: 367 QQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHLPQ 408
Query: 353 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 412
EFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K
Sbjct: 409 EFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMK 468
Query: 413 KLKVQLKRDNKQNKPY 428
+LKVQLKR +KPY
Sbjct: 469 RLKVQLKRSKNDSKPY 484
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
>gi|444724379|gb|ELW64984.1| CUGBP Elav-like family member 2 [Tupaia chinensis]
Length = 585
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 195 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 253
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 254 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 313
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 314 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 360
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 361 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 416
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 417 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 465
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 466 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 507
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 508 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 567
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 568 MKRLKVQLKRSKNDSKPY 585
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 110/197 (55%), Gaps = 21/197 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGC------------ 58
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+G
Sbjct: 98 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGLKSEPQKLELEAL 157
Query: 59 --CFVICPSR---QEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLP 111
C + PS+ +++ K P+Q+K AD E + KLFIGM+
Sbjct: 158 SKCGLSDPSKAFGMALIRSLTDIDGSKKKDKMHHPIQMKPADSEKSNAVEDRKLFIGMVS 217
Query: 112 KNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG
Sbjct: 218 KKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEG 277
Query: 172 SSVPLVVKWADTEKERQ 188
S P+VVK+ADT+K+++
Sbjct: 278 CSSPIVVKFADTQKDKE 294
>gi|383415259|gb|AFH30843.1| CUGBP Elav-like family member 2 isoform 4 [Macaca mulatta]
Length = 488
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 203/441 (46%), Gaps = 59/441 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 212
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 213 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 259
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + ++AN L S S GAL P+ + P + G + S G
Sbjct: 260 ATLAAAAAAAQTSATSTKANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 315
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRG---ASPDLSSNMGPRNYAMPPSGFVGSGYP 293
+Q G G +N NA+ G + L+ +G +G + +
Sbjct: 316 TLQ----------GLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQ 365
Query: 294 AVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFI 347
A G+Q P Y +L + S + S GP GANLFI
Sbjct: 366 AYSGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFI 407
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
YH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG
Sbjct: 408 YHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGF 467
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR +KPY
Sbjct: 468 QIGMKRLKVQLKRSKNDSKPY 488
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
>gi|351702706|gb|EHB05625.1| CUG-BP- and ETR-3-like factor 3 [Heterocephalus glaber]
Length = 381
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 381 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
G+ GFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 334 GMQHYTGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 381
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|363744108|ref|XP_003642976.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 454
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 365 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQ 424
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 425 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 454
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 315 NNSPGSVSPAVANSNPSTSS--SGGTGPPG------------ANLFIYHIPQEFGDQELG 360
N P + S + +SNPST+ +G PG LFI IP+ +++L
Sbjct: 10 NGQPDNTSLSSNHSNPSTNGHMNGLNHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLK 69
Query: 361 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 70 PLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 113
>gi|380792869|gb|AFE68310.1| CUGBP Elav-like family member 3 isoform 1, partial [Macaca mulatta]
Length = 368
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|301767880|ref|XP_002919375.1| PREDICTED: CUGBP Elav-like family member 3-like [Ailuropoda
melanoleuca]
Length = 461
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 372 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 431
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 432 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 461
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|134152719|ref|NP_001077060.1| CUGBP Elav-like family member 2 isoform 4 [Homo sapiens]
gi|332833595|ref|XP_003312502.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Pan
troglodytes]
gi|397515226|ref|XP_003827857.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Pan paniscus]
gi|403278085|ref|XP_003930659.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Saimiri
boliviensis boliviensis]
gi|16660677|gb|AAL27627.1|AF432906_1 neuroblastoma apoptosis-related RNA-binding protein isoform 4 [Homo
sapiens]
gi|119606752|gb|EAW86346.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|221046096|dbj|BAH14725.1| unnamed protein product [Homo sapiens]
gi|410263774|gb|JAA19853.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 488
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 202/441 (45%), Gaps = 59/441 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 212
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 213 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 259
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 260 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 315
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRG---ASPDLSSNMGPRNYAMPPSGFVGSGYP 293
+Q G G +N NA+ G + L+ +G +G + +
Sbjct: 316 TLQ----------GLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQ 365
Query: 294 AVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFI 347
A G+Q P Y +L + S + S GP GANLFI
Sbjct: 366 AYSGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFI 407
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
YH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG
Sbjct: 408 YHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGF 467
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR +KPY
Sbjct: 468 QIGMKRLKVQLKRSKNDSKPY 488
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
>gi|116003913|ref|NP_001070313.1| CUGBP Elav-like family member 3 [Bos taurus]
gi|122132428|sp|Q08E07.1|CELF3_BOVIN RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|115305254|gb|AAI23481.1| Trinucleotide repeat containing 4 [Bos taurus]
gi|296489556|tpg|DAA31669.1| TPA: CUG-BP- and ETR-3-like factor 3 [Bos taurus]
Length = 461
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 372 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 431
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 432 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 461
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|359477208|ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
Length = 785
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EA++A+
Sbjct: 118 AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K +E EV +FS YG ++D
Sbjct: 178 ALHNQYTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVKEIFSPYGQVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+K+ ++ A+AA+ A+NG + M G PL V++AD ++ R
Sbjct: 238 VYLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTMRGCDQPLTVRFADPKRPR 293
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 343 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI- 401
A LF+ +P+ ++++ F+ G VL + DK TG + F+ Y + A+ AI
Sbjct: 118 AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIR 177
Query: 402 AMMNGCQLGGKKLKVQLK 419
A+ N L G +Q++
Sbjct: 178 ALHNQYTLPGGVGPIQVR 195
>gi|9246977|gb|AAF86232.1|AF248650_1 RNA-binding protein BRUNOL4 [Homo sapiens]
Length = 294
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|410968366|ref|XP_003990678.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Felis catus]
Length = 463
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 374 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 433
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 463
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|354503685|ref|XP_003513911.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Cricetulus
griseus]
Length = 491
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 402 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 461
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 462 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 491
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|296206140|ref|XP_002750082.1| PREDICTED: CUGBP Elav-like family member 2 [Callithrix jacchus]
Length = 531
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 202/441 (45%), Gaps = 59/441 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 137 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 195
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 196 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 255
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 256 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 302
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 303 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 358
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRG---ASPDLSSNMGPRNYAMPPSGFVGSGYP 293
+Q G G +N NA+ G + L+ +G +G + +
Sbjct: 359 TLQ----------GLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQ 408
Query: 294 AVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFI 347
A G+Q P Y +L + S + S GP GANLFI
Sbjct: 409 AYSGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFI 450
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
YH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG
Sbjct: 451 YHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGF 510
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR +KPY
Sbjct: 511 QIGMKRLKVQLKRSKNDSKPY 531
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 57 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 116
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 117 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 176
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 177 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 236
>gi|359321739|ref|XP_003639689.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1 [Canis
lupus familiaris]
Length = 462
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 373 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 432
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 433 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|71164894|ref|NP_009116.3| CUGBP Elav-like family member 3 isoform 1 [Homo sapiens]
gi|149751259|ref|XP_001492746.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Equus
caballus]
gi|74756184|sp|Q5SZQ8.1|CELF3_HUMAN RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName: Full=CAG
repeat protein 4; AltName: Full=CUG-BP- and ETR-3-like
factor 3; AltName: Full=ELAV-type RNA-binding protein 1;
Short=ETR-1; AltName: Full=Expanded repeat domain
protein CAG/CTG 4; AltName: Full=RNA-binding protein
BRUNOL-1; AltName: Full=Trinucleotide repeat-containing
gene 4 protein
gi|85397642|gb|AAI04759.1| Trinucleotide repeat containing 4 [Homo sapiens]
gi|119573806|gb|EAW53421.1| trinucleotide repeat containing 4, isoform CRA_c [Homo sapiens]
gi|168278104|dbj|BAG11030.1| trinucleotide repeat-containing 4 protein [synthetic construct]
Length = 465
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 376 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 435
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 436 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|355558428|gb|EHH15208.1| hypothetical protein EGK_01267 [Macaca mulatta]
Length = 469
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 380 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 439
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 440 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 469
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|348586638|ref|XP_003479075.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1 [Cavia
porcellus]
Length = 463
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 374 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 433
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 434 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 463
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|350583381|ref|XP_003481499.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Sus scrofa]
gi|397492758|ref|XP_003817287.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Pan paniscus]
gi|426331463|ref|XP_004026700.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Gorilla
gorilla gorilla]
Length = 464
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 375 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 434
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|284005526|ref|NP_001164779.1| CUGBP Elav-like family member 3 [Oryctolagus cuniculus]
gi|217030863|gb|ACJ74025.1| trinucleotide repeat containing 4 (predicted) [Oryctolagus
cuniculus]
Length = 466
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 377 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 436
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 437 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 466
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|281182934|ref|NP_001162429.1| CUGBP Elav-like family member 3 [Papio anubis]
gi|163781027|gb|ABY40803.1| trinucleotide repeat containing 4 (predicted) [Papio anubis]
Length = 471
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 382 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 441
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 442 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 471
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|157821951|ref|NP_001102660.1| CUG-BP- and ETR-3-like factor 3 [Rattus norvegicus]
gi|149030747|gb|EDL85784.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 473
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 384 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 443
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 444 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 473
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|395539007|ref|XP_003771465.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Sarcophilus
harrisii]
Length = 526
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 254
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 255 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 301
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 302 ATLAAAAAAAQTSATTTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 357
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 358 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 406
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 407 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 448
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 449 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 508
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 509 MKRLKVQLKRSKNDSKPY 526
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
>gi|25807801|gb|AAN73884.1| CUG-BP and ETR-3 like factor 3 [Homo sapiens]
Length = 465
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 376 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 435
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 436 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|12746392|gb|AAK07474.1|AF329264_1 CUG-BP and ETR-3 like factor 3 [Homo sapiens]
Length = 462
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 373 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 432
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 433 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|332220299|ref|XP_003259294.1| PREDICTED: CUGBP Elav-like family member 3 [Nomascus leucogenys]
Length = 467
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 378 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 437
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 438 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 467
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|35505365|gb|AAH57553.1| Tnrc4 protein [Mus musculus]
Length = 494
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 405 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 464
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 465 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 494
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|148706793|gb|EDL38740.1| trinucleotide repeat containing 4, isoform CRA_f [Mus musculus]
Length = 466
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 377 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 436
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 437 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 466
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|395855962|ref|XP_003800412.1| PREDICTED: CUGBP Elav-like family member 3 [Otolemur garnettii]
Length = 475
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 386 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 445
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 446 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 475
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|73949074|ref|XP_849139.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Canis lupus
familiaris]
gi|338721615|ref|XP_003364409.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Equus
caballus]
Length = 484
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 202/438 (46%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 212
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 213 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 259
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 260 ATLAAAAAAAQTSATTTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 315
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 316 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 364
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 365 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 406
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 407 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 466
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 467 MKRLKVQLKRSKNDSKPY 484
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
>gi|71297206|gb|AAH52491.1| Trinucleotide repeat containing 4 [Homo sapiens]
Length = 464
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAKAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 375 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 434
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAKAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|126313728|ref|XP_001366642.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Monodelphis
domestica]
Length = 458
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 369 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 428
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 429 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +N+
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|296228815|ref|XP_002759970.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Callithrix
jacchus]
Length = 465
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 376 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 435
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 436 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +N+
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|403302658|ref|XP_003941971.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403302660|ref|XP_003941972.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 464
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 375 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 434
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +N+
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|344246977|gb|EGW03081.1| CUG-BP- and ETR-3-like factor 3 [Cricetulus griseus]
Length = 447
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
TGP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASA
Sbjct: 357 TGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 416
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 417 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 447
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|148706790|gb|EDL38737.1| trinucleotide repeat containing 4, isoform CRA_c [Mus musculus]
Length = 567
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 78 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 137
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 138 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 197
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 198 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 257
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 258 QQVATQ 263
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 478 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 537
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 538 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 567
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 160 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 216
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 217 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 252
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 305 PGGMLGHRP-LNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAF 363
P LG P L +SP S +P PS+ ++ P LF+ IP+ +++L F
Sbjct: 46 PASWLGSFPCLWSSPCSPTP-----GPSSWAAPMKEPDAIKLFVGQIPRHLEEKDLKPIF 100
Query: 364 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDN 422
+ FGR+ V DK TG+ K F++Y + SA A A+ L G +Q+K +
Sbjct: 101 EQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAD 160
Query: 423 KQNK 426
+++
Sbjct: 161 SESR 164
>gi|354503687|ref|XP_003513912.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Cricetulus
griseus]
Length = 462
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 183
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 184 QQVATQ 189
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 373 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 432
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 433 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|426218925|ref|XP_004003685.1| PREDICTED: CUGBP Elav-like family member 3 [Ovis aries]
Length = 449
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 360 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 419
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 420 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 449
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|2204089|emb|CAB05388.1| FCA gamma [Arabidopsis thaliana]
gi|57169178|gb|AAW38964.1| FCA [Arabidopsis thaliana]
Length = 747
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|186511879|ref|NP_849543.2| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658325|gb|AEE83725.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 747
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|395535951|ref|XP_003769984.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Sarcophilus
harrisii]
Length = 458
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 369 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 428
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 429 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +N+
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSENR 91
>gi|186511881|ref|NP_193363.4| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658326|gb|AEE83726.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 533
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|27369577|ref|NP_766022.1| CUGBP Elav-like family member 3 [Mus musculus]
gi|81914478|sp|Q8CIN6.1|CELF3_MOUSE RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|25807803|gb|AAN73885.1| CUG-BP and ETR-3 like factor 3 [Mus musculus]
Length = 465
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 183
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 184 QQVATQ 189
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 376 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 435
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 436 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|219520290|gb|AAI43227.1| TNRC4 protein [Homo sapiens]
Length = 464
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 183
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 184 QQVATQ 189
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 375 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 434
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|2204096|emb|CAB05392.1| FCA delta [Arabidopsis thaliana]
gi|5302786|emb|CAB46035.1| FCA delta protein [Arabidopsis thaliana]
gi|7268378|emb|CAB78671.1| FCA delta protein [Arabidopsis thaliana]
Length = 533
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|2204095|emb|CAB05391.1| FCA gamma [Arabidopsis thaliana]
Length = 747
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|148706791|gb|EDL38738.1| trinucleotide repeat containing 4, isoform CRA_d [Mus musculus]
Length = 538
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 78 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 137
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 138 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 196
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 197 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 256
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 257 QQVATQ 262
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 449 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 508
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 509 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 538
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 305 PGGMLGHRP-LNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAF 363
P LG P L +SP S +P PS+ ++ P LF+ IP+ +++L F
Sbjct: 46 PASWLGSFPCLWSSPCSPTP-----GPSSWAAPMKEPDAIKLFVGQIPRHLEEKDLKPIF 100
Query: 364 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDN 422
+ FGR+ V DK TG+ K F++Y + SA A A+ L G +Q+K +
Sbjct: 101 EQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAD 160
Query: 423 KQNK 426
+++
Sbjct: 161 SESR 164
>gi|334302803|sp|O04425.2|FCA_ARATH RecName: Full=Flowering time control protein FCA
gi|2244986|emb|CAB10407.1| FCA gamma protein [Arabidopsis thaliana]
gi|7268377|emb|CAB78670.1| FCA gamma protein [Arabidopsis thaliana]
Length = 747
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|2204091|emb|CAB05389.1| FCA delta [Arabidopsis thaliana]
Length = 533
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|296083224|emb|CBI22860.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 117/175 (66%), Gaps = 3/175 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EA++A+ A
Sbjct: 42 KLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRA 101
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN+ TLPG P+QV+YADGE ERL E+KLF+G L K +E EV +FS YG ++D+
Sbjct: 102 LHNQYTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVKEIFSPYGQVEDV 161
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
++R + S+GC F+K+ ++ A+AA+ A+NG + M G PL V++AD ++ R
Sbjct: 162 YLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTMRGCDQPLTVRFADPKRPR 216
>gi|33390912|gb|AAQ17123.1| flowering time control protein isoform OsFCA-1 [Oryza sativa Indica
Group]
gi|47496990|dbj|BAD20100.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
gi|50261763|gb|AAT72462.1| FCA gamma protein [Oryza sativa Japonica Group]
gi|58003966|gb|AAW62371.1| FCA [Oryza sativa Japonica Group]
Length = 738
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 182 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 297
>gi|410950073|ref|XP_004001486.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 5
[Felis catus]
Length = 479
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 175/377 (46%), Gaps = 67/377 (17%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 22 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 81
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 82 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 141
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG-------- 228
VVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 142 VVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQT 190
Query: 229 --YQASGSY---------------------GLMQYRL--------PPMQNQPGFHGIIPP 257
SGSY GL + PP+ G++ P
Sbjct: 191 TVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGSTAVPGLVAP 250
Query: 258 VNQGNA----MRGASPDLSSNM--GPRNYAMPPSGFVGSGYPAVPGL-QYPMPYPGGMLG 310
+ G A G P L + G Y + +PA G+ QY YP +
Sbjct: 251 ITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAI- 309
Query: 311 HRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 370
P+ +S V P GP G NLFIYH+PQE GD EL F FG ++
Sbjct: 310 -TPIAHS-------VPQPPPLLQQQQREGPEGCNLFIYHLPQEXGDTELTQMFLPFGNII 361
Query: 371 SAKVFVDKATGVSKCFG 387
S+KVF+D+AT SKCF
Sbjct: 362 SSKVFMDRATNQSKCFA 378
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 58 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 115
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 116 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 157
>gi|297800520|ref|XP_002868144.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
gi|297313980|gb|EFH44403.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 127 VKLFVGSVPRTAIEEEVRPFFEKHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 186
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 187 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGRVED 246
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++AD ++ +
Sbjct: 247 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPK 302
>gi|293333224|ref|NP_001169298.1| uncharacterized protein LOC100383162 [Zea mays]
gi|224028499|gb|ACN33325.1| unknown [Zea mays]
gi|414588978|tpg|DAA39549.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 735
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++ S VKLFVG VP+ TE + +F+E V EV +IKD+ T +GCCFV +
Sbjct: 113 QDHDSRSNYVKLFVGSVPRTATEEDVRPLFEEHGDVLEVALIKDRKTGEQQGCCFVKYAT 172
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSAL 122
+EA++A+ HN TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +
Sbjct: 173 SEEAERAIRGLHNHYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATPKEIEEI 232
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F+ YG ++D+ I+R S + S+GC F+K+ +KE A+ A+ A++G + M G PL++++AD
Sbjct: 233 FAPYGHVEDVYIMRDSVKQSRGCGFVKFSSKEAAVEAMNALSGTYTMRGCEQPLIIRFAD 292
Query: 183 TEKER 187
++ R
Sbjct: 293 PKRPR 297
>gi|218201679|gb|EEC84106.1| hypothetical protein OsI_30426 [Oryza sativa Indica Group]
Length = 758
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 182 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 297
>gi|332658328|gb|AEE83728.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 672
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 45 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 104
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 105 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 164
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 165 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 220
>gi|414588979|tpg|DAA39550.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 708
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++ S VKLFVG VP+ TE + +F+E V EV +IKD+ T +GCCFV +
Sbjct: 113 QDHDSRSNYVKLFVGSVPRTATEEDVRPLFEEHGDVLEVALIKDRKTGEQQGCCFVKYAT 172
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSAL 122
+EA++A+ HN TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +
Sbjct: 173 SEEAERAIRGLHNHYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATPKEIEEI 232
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F+ YG ++D+ I+R S + S+GC F+K+ +KE A+ A+ A++G + M G PL++++AD
Sbjct: 233 FAPYGHVEDVYIMRDSVKQSRGCGFVKFSSKEAAVEAMNALSGTYTMRGCEQPLIIRFAD 292
Query: 183 TEKER 187
++ R
Sbjct: 293 PKRPR 297
>gi|147905119|ref|NP_001080695.1| CUGBP Elav-like family member 3-B [Xenopus laevis]
gi|82241483|sp|Q7ZWM3.1|CEL3B_XENLA RecName: Full=CUGBP Elav-like family member 3-B; Short=CELF3-B;
AltName: Full=Bruno-like protein 1-B; AltName:
Full=CUG-BP- and ETR-3-like factor 3-B; AltName:
Full=ELAV-type RNA-binding protein 1-B; Short=ETR-1-B;
AltName: Full=RNA-binding protein BRUNOL-1-B; AltName:
Full=Trinucleotide repeat-containing gene 4 protein B
gi|28422663|gb|AAH46942.1| Tnrc4-prov protein [Xenopus laevis]
Length = 462
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 124/186 (66%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVANQ 190
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 81/136 (59%), Gaps = 5/136 (3%)
Query: 294 AVPGLQ-YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQ 352
A G+Q Y YP P P PA+ P GP G N+FIYH+PQ
Sbjct: 331 AYAGMQHYTAAYPAAYGLVSPAFTQP----PAILTQQPPQQQQQREGPEGCNIFIYHLPQ 386
Query: 353 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 412
EF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ AI MNG Q+G K
Sbjct: 387 EFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMK 446
Query: 413 KLKVQLKRDNKQNKPY 428
+LKVQLKR N+PY
Sbjct: 447 RLKVQLKRPKDANRPY 462
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|443723647|gb|ELU11974.1| hypothetical protein CAPTEDRAFT_144233 [Capitella teleta]
Length = 461
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 138/224 (61%), Gaps = 10/224 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E+ L MF+EF V ++N+++DK T S+GCCFV +R+ A +A
Sbjct: 14 DAIKMFVGQIPRSMDESDLRKMFEEFGPVFQLNVLRDKVTGQSKGCCFVTFYTRKSALEA 73
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N HN KT+ G P+Q+K AD E E KLF+GML K +E EV +F+ +GTI++
Sbjct: 74 QNQLHNIKTMAGMQHPIQMKPADCEKRNEERKLFVGMLSKKCNENEVRMMFAPFGTIEEC 133
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S+GCAF+ Y +K+ A A++ ++ MEG PLVV++ADT+KE++ ++
Sbjct: 134 TVLREQNGQSRGCAFVTYASKQCAQNAIKGMHHSQTMEGCRFPLVVRFADTQKEKEMKKL 193
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
Q+ Q+ NL N + L G +G P Y QAS S G
Sbjct: 194 QQMQA---NLLNTN-----LTGLAGLG--PQYLNLLQQASSSPG 227
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEF DQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 372 GPDGANLFIYHLPQEFADQDLMQMFLPFGTVISAKVFIDKQTNLSKCFGFVSYDNPMSAQ 431
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 432 AAIQAMNGFQIGMKRLKVQLKRPKSDSKPY 461
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 334 SSGGTG-----PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF 388
+S GTG P +F+ IP+ + +L F+ FG V V DK TG SK F
Sbjct: 2 NSQGTGKTEPDPDAIKMFVGQIPRSMDESDLRKMFEEFGPVFQLNVLRDKVTGQSKGCCF 61
Query: 389 VSYESPASAQNA 400
V++ + SA A
Sbjct: 62 VTFYTRKSALEA 73
>gi|354467968|ref|XP_003496439.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Cricetulus griseus]
Length = 520
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 201/438 (45%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 130 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 188
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 189 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 248
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 249 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 295
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 296 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 351
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 352 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 400
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP ANLFIYH+
Sbjct: 401 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEMANLFIYHL 442
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 443 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 502
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 503 MKRLKVQLKRSKNDSKPY 520
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
>gi|115478012|ref|NP_001062601.1| Os09g0123200 [Oryza sativa Japonica Group]
gi|34555646|gb|AAQ74971.1| flowering time control protein isoform OsFCA-3 [Oryza sativa Indica
Group]
gi|113630834|dbj|BAF24515.1| Os09g0123200 [Oryza sativa Japonica Group]
Length = 637
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 21 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 80
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 81 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 140
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 141 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 196
>gi|34555650|gb|AAQ74973.1| flowering time control protein isoform OsFCA-4 [Oryza sativa Indica
Group]
Length = 626
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 21 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 80
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 81 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 140
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 141 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 196
>gi|354467970|ref|XP_003496440.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Cricetulus griseus]
Length = 526
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 201/438 (45%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 254
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 255 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 301
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 302 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 357
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 358 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 406
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP ANLFIYH+
Sbjct: 407 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEMANLFIYHL 448
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 449 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 508
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 509 MKRLKVQLKRSKNDSKPY 526
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
>gi|344239315|gb|EGV95418.1| CUG-BP- and ETR-3-like factor 2 [Cricetulus griseus]
Length = 508
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 201/438 (45%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 236
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 237 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 283
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 284 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 339
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 340 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 388
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP ANLFIYH+
Sbjct: 389 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEMANLFIYHL 430
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 431 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 490
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 491 MKRLKVQLKRSKNDSKPY 508
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
>gi|168017537|ref|XP_001761304.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687644|gb|EDQ74026.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 110/159 (69%), Gaps = 3/159 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ +TE ++ MF E V EV IIKDK T +GCCFV + +EAD+A+
Sbjct: 2 VKLFVGSVPRTITEDEVRPMFAEHGNVIEVAIIKDKRTGNQQGCCFVKYSTVEEADRAIR 61
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+KTLPG +P+QV+YADGE ERL EHKLF+G L K SE E+ LF YG + D
Sbjct: 62 ALHNQKTLPGGVAPVQVRYADGERERLGAVEHKLFVGSLNKQASEKEIEELFLPYGRVDD 121
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
+ I+R Q+ S+GCAF+KY ++ A AA+ A+NG H M+
Sbjct: 122 VYIMRDEQKQSRGCAFIKYSQRDHAQAAINALNGVHIMQ 160
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+ ++E EV +F+ +G + ++ I++ + +GC F+KY T E+A A+ A
Sbjct: 3 KLFVGSVPRTITEDEVRPMFAEHGNVIEVAIIKDKRTGNQQGCCFVKYSTVEEADRAIRA 62
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMG 219
++ + + G P+ V++AD E+ER K + N ++ + LF LP G
Sbjct: 63 LHNQKTLPGGVAPVQVRYADGERERLGAVEHKLFVGSLNKQASEKEIEELF--LPYG 117
>gi|391337388|ref|XP_003743051.1| PREDICTED: CUGBP Elav-like family member 2-like [Metaseiulus
occidentalis]
Length = 512
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 1/169 (0%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+K+FVGQ+P++ E +L +F+EF V +N+++DK T SRGCCFV +R+ A A N
Sbjct: 58 IKMFVGQIPRNWDENELRNLFEEFGKVHSINVLRDKATGNSRGCCFVTFYTRKSALDAQN 117
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
HN KTLPG P+Q+K AD E R E KLFIGML K E++V +FS +GTI++ +
Sbjct: 118 DLHNIKTLPGMHHPIQMKPADSE-NRNERKLFIGMLSKECDESDVRLMFSSFGTIEECTV 176
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
LR Q SKGCAF+ Y T++ A+ A++++N M+G S PLVVK+ADT
Sbjct: 177 LRDGQGQSKGCAFVTYSTRQCAINAIKSMNHSQTMKGCSNPLVVKFADT 225
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEF D +L AF FG+V+SAKVF+DK T +SKCFGFVSY SP SAQ
Sbjct: 423 GPDGANLFIYHLPQEFADIDLVQAFMPFGQVISAKVFIDKQTNLSKCFGFVSYASPVSAQ 482
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR Q PY
Sbjct: 483 AAIQSMNGFQIGAKRLKVQLKRSKDQGTPY 512
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLF+G + K E+ + MF F ++E +++D + S+GC FV +R
Sbjct: 138 DSENRNER-KLFIGMLSKECDESDVRLMFSSFGTIEECTVLRDGQGQ-SKGCAFVTYSTR 195
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYAD 95
Q A A+ + ++ +T+ G S+PL VK+AD
Sbjct: 196 QCAINAIKSMNHSQTMKGCSNPLVVKFAD 224
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
+F+ IP+ + + EL N F+ FG+V S V DKATG S+ FV++ + SA +A +
Sbjct: 60 MFVGQIPRNWDENELRNLFEEFGKVHSINVLRDKATGNSRGCCFVTFYTRKSALDAQNDL 119
Query: 405 NGCQ-LGGKKLKVQLKRDNKQNK 426
+ + L G +Q+K + +N+
Sbjct: 120 HNIKTLPGMHHPIQMKPADSENR 142
>gi|74198996|dbj|BAE30715.1| unnamed protein product [Mus musculus]
Length = 488
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 201/441 (45%), Gaps = 59/441 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 212
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 213 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 259
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 260 ATLAAAAAAAQTSATSTNANPL----SSTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 315
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRG---ASPDLSSNMGPRNYAMPPSGFVGSGYP 293
+Q G G +N NA+ G + L+ +G +G + +
Sbjct: 316 TLQ----------GLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQ 365
Query: 294 AVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFI 347
A G+Q P Y +L + S + S G GANLFI
Sbjct: 366 AYSGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGTEGANLFI 407
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
YH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG
Sbjct: 408 YHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGF 467
Query: 408 QLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR +KPY
Sbjct: 468 QIGMKRLKVQLKRSKNDSKPY 488
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
>gi|334314036|ref|XP_003339980.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Monodelphis
domestica]
Length = 464
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 122/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 49 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ ++ +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERTLR 228
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 229 RMHQMAGQ 236
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 375 GPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVFVDRATNQSKCFGFVSFDNPASAQ 434
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ +++L F+ FG++ V D+ TGV K F++Y +S AQ+A+
Sbjct: 55 LFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSAL 114
>gi|298710156|emb|CBJ31866.1| trinucleotide repeat containing 4, isoform CRA_d [Ectocarpus
siliculosus]
Length = 494
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+PKHM E L +F+EF + ++ +I+DK + RGC F+ +R AD A
Sbjct: 42 DAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARVSADAA 101
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ A H ++ L +PLQV+ A+G+ E+ E+KLF+GM PK+ +E E+ A+F+ YGT++++
Sbjct: 102 IAALHGQRRLDRGQNPLQVRPAEGQAEQ-ENKLFVGMAPKSANEDEIRAVFAPYGTLREI 160
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++R T+KGCAF+KY T++ AL A+EA++ ++ M+G PLVVK+AD ++ QA
Sbjct: 161 HVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQA 217
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 64/82 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GPPGANLFIYH+PQ+ D +L AF FG VLSAKV++D+A+G SK FGFVSY P+ A+
Sbjct: 366 GPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAE 425
Query: 399 NAIAMMNGCQLGGKKLKVQLKR 420
AIA MNG Q+G K+LKVQ KR
Sbjct: 426 AAIAQMNGFQIGSKRLKVQHKR 447
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+E+ KLFVG PK E ++ A+F + + E+++I+++ ++GC FV +RQ A
Sbjct: 127 AEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDG-TNKGCAFVKYTTRQSAL 185
Query: 71 KAVNACHNKKTLPGASSPLQVKYAD 95
A+ A H + T+ G PL VK+AD
Sbjct: 186 DAIEALHEQYTMQGGPRPLVVKFAD 210
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LF+ IP+ +++L F+ FG + V DK +G+ + F++Y + SA AIA +
Sbjct: 46 LFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARVSADAAIAAL 105
Query: 405 NG 406
+G
Sbjct: 106 HG 107
>gi|34555648|gb|AAQ74972.1| flowering time control protein isoform OsFCA-2 [Oryza sativa Indica
Group]
Length = 649
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 182 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 297
>gi|126272943|ref|XP_001371226.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Monodelphis
domestica]
Length = 491
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 122/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 49 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ ++ +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERTLR 228
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 229 RMHQMAGQ 236
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 402 GPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVFVDRATNQSKCFGFVSFDNPASAQ 461
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 462 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 491
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ +++L F+ FG++ V D+ TGV K F++Y +S AQ+A+
Sbjct: 55 LFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSAL 114
>gi|159032033|ref|NP_001103699.1| CUGBP Elav-like family member 2 isoform 2 [Mus musculus]
gi|74209492|dbj|BAE23295.1| unnamed protein product [Mus musculus]
Length = 524
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 202/445 (45%), Gaps = 67/445 (15%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 130 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 188
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYA----DGELERLEHKLFIGMLPKNVSE 116
V +R A A+ A H +T+ G SSP+ VK+A D E RL+ +L M N +
Sbjct: 189 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTA- 247
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+G + L L T + A L+ T L A I +M G +
Sbjct: 248 --------TWGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQ 291
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQAS 232
+ A A + + AN L S S GAL P+ + P + G +
Sbjct: 292 LQNLATLAAAAAAAQTSATSTNANPL----SSTSSALGALTSPVAASTPNSTAGAAMNSL 347
Query: 233 GSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRG---ASPDLSSNMGPRNYAMPPSGFVG 289
S G +Q G G +N NA+ G + L+ +G +G +
Sbjct: 348 TSLGTLQ----------GLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMD 397
Query: 290 SGYPAVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGA 343
+ A G+Q P Y +L + S + S GP GA
Sbjct: 398 ALTQAYSGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGA 439
Query: 344 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 403
NLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI
Sbjct: 440 NLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQA 499
Query: 404 MNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR +KPY
Sbjct: 500 MNGFQIGMKRLKVQLKRSKNDSKPY 524
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
>gi|18150431|gb|AAL61622.1|AF414188_1 FCA gamma [Brassica napus]
Length = 715
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV IKDK T +GCCFV + ++AD+A+
Sbjct: 102 VKLFVGSVPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIR 161
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + +QV+YADGE ER+ E KLF+G L K +E EV LF +G ++D
Sbjct: 162 ALHNQITLPGGTGLVQVRYADGERERIGAVEFKLFVGSLNKQATENEVEELFLQFGRVED 221
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++AD ++ +
Sbjct: 222 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPK 277
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ ++E+ F+ G VL DK TG + FV Y + A AI A+
Sbjct: 104 LFVGSVPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIRAL 163
Query: 404 MNGCQLGGKKLKVQLK 419
N L G VQ++
Sbjct: 164 HNQITLPGGTGLVQVR 179
>gi|149030745|gb|EDL85782.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 284
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|74142177|dbj|BAE31857.1| unnamed protein product [Mus musculus]
Length = 495
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 199/439 (45%), Gaps = 55/439 (12%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 101 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 159
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 160 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 219
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 220 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 266
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYNGYGYQASGSYGLM 238
A A + + AN L S S GAL P+ + P + + G
Sbjct: 267 ATLAAAAAAAQTSATSTNANPL----SSTSSALGALTSPVAASTP--------NSTAGAA 314
Query: 239 QYRLPPMQNQPGFHGIIPPVNQGNAMRG---ASPDLSSNMGPRNYAMPPSGFVGSGYPAV 295
L + G G +N NA+ G + L+ +G +G + + A
Sbjct: 315 MNSLTSLGTLQGLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMDALTQAY 374
Query: 296 PGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYH 349
G+Q P Y +L + S + S G GANLFIYH
Sbjct: 375 SGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGTEGANLFIYH 416
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+
Sbjct: 417 LPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQI 476
Query: 410 GGKKLKVQLKRDNKQNKPY 428
G K+LKVQLKR +KPY
Sbjct: 477 GMKRLKVQLKRSKNDSKPY 495
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 21 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 80
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 81 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 140
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 141 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 200
>gi|334314038|ref|XP_003339981.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Monodelphis
domestica]
Length = 470
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 122/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 49 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ ++ +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERTLR 228
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 229 RMHQMAGQ 236
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 381 GPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVFVDRATNQSKCFGFVSFDNPASAQ 440
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 441 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 470
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ +++L F+ FG++ V D+ TGV K F++Y +S AQ+A+
Sbjct: 55 LFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSAL 114
>gi|194375526|dbj|BAG56708.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 202/445 (45%), Gaps = 67/445 (15%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 102 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 160
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYA----DGELERLEHKLFIGMLPKNVSE 116
V +R A A+ A H +T+ G SSP+ VK+A D E RL+ +L M N +
Sbjct: 161 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTA- 219
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+G + L L T + A L+ T L A I +M G +
Sbjct: 220 --------TWGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQ 263
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQAS 232
+ A A + + AN L S S GAL P+ + P + G +
Sbjct: 264 LQNLATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSL 319
Query: 233 GSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRG---ASPDLSSNMGPRNYAMPPSGFVG 289
S G +Q G G +N NA+ G + L+ +G +G +
Sbjct: 320 TSLGTLQ----------GLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMD 369
Query: 290 SGYPAVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGA 343
+ A G+Q P Y +L + S + S GP GA
Sbjct: 370 ALTQAYSGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGA 411
Query: 344 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 403
NLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI
Sbjct: 412 NLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQA 471
Query: 404 MNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 MNGFQIGMKRLKVQLKRSKNDSKPY 496
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 22 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 81
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 82 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 141
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 142 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 201
>gi|410225364|gb|JAA09901.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263770|gb|JAA19851.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263772|gb|JAA19852.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305936|gb|JAA31568.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349365|gb|JAA41286.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 519
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 202/445 (45%), Gaps = 67/445 (15%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 125 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 183
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYA----DGELERLEHKLFIGMLPKNVSE 116
V +R A A+ A H +T+ G SSP+ VK+A D E RL+ +L M N +
Sbjct: 184 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTA- 242
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+G + L L T + A L+ T L A I +M G +
Sbjct: 243 --------TWGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQ 286
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQAS 232
+ A A + + AN L S S GAL P+ + P + G +
Sbjct: 287 LQNLATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSL 342
Query: 233 GSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRG---ASPDLSSNMGPRNYAMPPSGFVG 289
S G +Q G G +N NA+ G + L+ +G +G +
Sbjct: 343 TSLGTLQ----------GLAGATVGLNNINALAGTINSMAALNGGLGATGLTNGTAGTMD 392
Query: 290 SGYPAVPGLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGA 343
+ A G+Q P Y +L + S + S GP GA
Sbjct: 393 ALTQAYSGIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGA 434
Query: 344 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 403
NLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI
Sbjct: 435 NLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQA 494
Query: 404 MNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 MNGFQIGMKRLKVQLKRSKNDSKPY 519
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
>gi|11045077|emb|CAB41488.2| putative FCA orthologue [Brassica napus]
Length = 384
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV IKDK T +GCCFV + ++AD+A+
Sbjct: 105 VKLFVGSVPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIR 164
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + +QV+YADGE ER+ E KLF+G L K +E EV LF +G ++D
Sbjct: 165 ALHNQITLPGGTGLVQVRYADGERERIGAVEFKLFVGSLNKQATENEVEELFLQFGRVED 224
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++AD ++ +
Sbjct: 225 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPK 280
>gi|194388952|dbj|BAG61493.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 201/436 (46%), Gaps = 47/436 (10%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYA----DGELERLEHKLFIGMLPKNVSE 116
V +R A A+ A H +T+ G SSP+ VK+A D E RL+ +L M N +
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTA- 235
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+G + L L T + A L+ T L A I +M G +
Sbjct: 236 --------TWGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQ 279
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQAS 232
+ A A + + AN L S S GAL P+ + P + G +
Sbjct: 280 LQNLATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSL 335
Query: 233 GSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGY 292
S G +Q G G +N NA+ A + S M N + +G
Sbjct: 336 TSLGTLQ----------GLAGATVGLNNINAL--AVAQMLSGMAALNGGLGATGLTNGTA 383
Query: 293 PAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQ 352
A+ L Y G + P S ++ S + S GP GANLFIYH+PQ
Sbjct: 384 GAMDAL--TQAYSG--IQQYAAAALPTLYSQSLLQQQ-SAAGSQKEGPEGANLFIYHLPQ 438
Query: 353 EFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGK 412
EFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G K
Sbjct: 439 EFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMK 498
Query: 413 KLKVQLKRDNKQNKPY 428
+LKVQLKR +KPY
Sbjct: 499 RLKVQLKRSKNDSKPY 514
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
>gi|152013390|sp|Q7T2T1.2|CELF2_CHICK RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|31747201|gb|AAP57762.1| ELAV-type RNA-binding protein 3 variant L [Gallus gallus]
Length = 484
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 196/438 (44%), Gaps = 57/438 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYA----DGELERLEHKLFIGMLPKNVSE 116
V +R A A+ A H +T+ G SSP+ VK+A D E RL+ +L M N +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTA- 211
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+G + L L T + A L+ T L A I +M G +
Sbjct: 212 --------TWGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQ 255
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
+ A A + + AN L +L + A G + S G
Sbjct: 256 LQNLATLAAAAAAAQTSATTTNANPLSTTTGALGALTSPVAASTANSTAGAAMNSLTSLG 315
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 316 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 364
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 365 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 406
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 407 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 466
Query: 411 GKKLKVQLKRDNKQNKPY 428
K+LKVQLKR +KPY
Sbjct: 467 MKRLKVQLKRSKNDSKPY 484
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
>gi|363737471|ref|XP_425051.3| PREDICTED: CUGBP Elav-like family member 3 [Gallus gallus]
Length = 445
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E+ L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 3 DHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSAL 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIE 122
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 123 ECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLR 182
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 183 RMHQMAGQ 190
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 356 GPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQ 415
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 416 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 445
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ + +L F+ FGR+ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 9 LFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSAL 68
>gi|363742943|ref|XP_003642748.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Gallus
gallus]
Length = 464
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 12/224 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
Q+ SQ Q FGA Y+ Y G++G
Sbjct: 185 QQVASQLGMFSPIALQ----FGA--------YSAYTQAVGGTWG 216
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 375 GPEGCNIFIYHLPQEFADTEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQ 434
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 435 AAIHAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K + + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+ A H +TLPGASS L VK+AD E ER
Sbjct: 144 SHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|145306688|gb|ABP57108.1| CUG-BP and ETR-3-like factor 6 [Gallus gallus]
Length = 445
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 121/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E+ L +F+EF + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 125 TILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLRRM 184
Query: 193 QKAQSQ 198
+ Q
Sbjct: 185 HQMAGQ 190
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 356 GPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQ 415
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 416 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 445
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ + +L F+ FGR+ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 9 LFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSAL 68
>gi|82541152|ref|XP_724838.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479626|gb|EAA16403.1| FCA gamma-related [Plasmodium yoelii yoelii]
Length = 387
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 176/359 (49%), Gaps = 86/359 (23%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+ E QL +F+EF +V+EV II+DK T + FV S EAD A+
Sbjct: 86 IKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIR 145
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPKN++E + +F
Sbjct: 146 SLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSLPKNITEESIKDMF 205
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 206 SVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLEGCNRPVEVRFAE 265
Query: 183 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRL 242
+ +QA+ Q +
Sbjct: 266 PKSSKQAQS-----------------------------------------------QVGI 278
Query: 243 PPMQNQPGFHGIIPPVNQG---NAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP-----A 294
P+QN P HGI P + G N G + +++N PR + + G G P
Sbjct: 279 QPLQNAP--HGISPQAHPGTPNNINYGNNFGVNNNY-PRQVGVWKEYYSGEGRPYYYNEQ 335
Query: 295 VPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSS-SGGTGPPGANLFIYHIPQ 352
Q+ MP L N+NP+ + S +GPPGANLFI+H+PQ
Sbjct: 336 TNTTQWEMPKEFETL---------------FMNNNPNIHNLSDSSGPPGANLFIFHVPQ 379
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 58/87 (66%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 179 ESGVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 238
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+++ + KKTL G + P++V++A+
Sbjct: 239 ALYAISSLNGKKTLEGCNRPVEVRFAE 265
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LFI +P+ + +++L F+ FG V + DK T + K FV S + A N
Sbjct: 83 PVSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADN 142
Query: 400 AIAMMNG-----CQLGGKKLK 415
AI +N QLG ++K
Sbjct: 143 AIRSLNNQRTLDQQLGSLQVK 163
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+G A LFI +P+ ++ + + F +G V + D +TG+ K FV + A
Sbjct: 180 SGVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQA 239
Query: 398 QNAIAMMNG 406
AI+ +NG
Sbjct: 240 LYAISSLNG 248
>gi|55730095|emb|CAH91772.1| hypothetical protein [Pongo abelii]
Length = 519
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 198/430 (46%), Gaps = 57/430 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +L + + +
Sbjct: 177 VTSSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTAT 236
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+G + L L T + A L+ T L A I +M G + +
Sbjct: 237 -----WGNLTGLGGL-----TPQYLALLQQATSSSNLGAFSGI---QQMAGMNALQLQNL 283
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL--PMGYAPPYN--GYGYQASGSYG 236
A A + + AN L S S GAL P+ + P + G + S G
Sbjct: 284 ATLAAAAAAAQTSATSTNANPL----STTSSALGALTSPVAASTPNSTAGAAMNSLTSLG 339
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
+Q G G +N NA+ G + L+ +G +G + + A
Sbjct: 340 TLQ----------GLAGATVGLNNINALAGMAA-LNGGLGATGLTNGTAGTMDALTQAYS 388
Query: 297 GLQ------YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHI 350
G+Q P Y +L + S + S GP GANLFIYH+
Sbjct: 389 GIQQYAAAALPTLYSQSLLQQQ------------------SAAGSQKEGPEGANLFIYHL 430
Query: 351 PQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLG 410
PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI MNG Q+G
Sbjct: 431 PQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIG 490
Query: 411 GKKLKVQLKR 420
K+LKVQLKR
Sbjct: 491 MKRLKVQLKR 500
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTSSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
>gi|363742939|ref|XP_003642747.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Gallus
gallus]
Length = 451
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 125/186 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVASQ 190
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K + + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+ A H +TLPGASS L VK+AD E ER
Sbjct: 144 SHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|291327533|ref|NP_001167545.1| CUGBP Elav-like family member 4 isoform F [Mus musculus]
gi|26341974|dbj|BAC34649.1| unnamed protein product [Mus musculus]
Length = 456
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 121/197 (61%), Gaps = 10/197 (5%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSA 121
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 111 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRR 170
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 171 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 230
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 231 DTDKERTMRRMQQMAGQ 247
>gi|148664595|gb|EDK97011.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_b [Mus
musculus]
Length = 463
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 121/197 (61%), Gaps = 10/197 (5%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 57 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 116
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSA 121
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 117 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRR 176
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 177 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 236
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 237 DTDKERTMRRMQQMAGQ 253
>gi|326674562|ref|XP_002664812.2| PREDICTED: CUGBP Elav-like family member 3-like [Danio rerio]
Length = 442
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 124/186 (66%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+++ + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQYGKIYELTVIKDKYTGMHKGCAFLTYCARESAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K S+ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRKIFEPFGGIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A +A+ +++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHSEAQSAINSLHGSRTLPGASSSLVVKFADTEKERGVRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVTSQ 190
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 353 GPEGCNVFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQ 412
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 413 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 442
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LFI IP+ +++L F+ +G++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFIGQIPRNLEEKDLKPIFEQYGKIYELTVIKDKYTGMHKGCAFLTYCARESAIK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|387542962|gb|AFJ72108.1| CUGBP Elav-like family member 4 isoform 1 [Macaca mulatta]
Length = 486
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 120/198 (60%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAI 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQTALHEQKTLPGMARPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|226371661|ref|NP_001139765.1| CUGBP Elav-like family member 4 isoform B [Mus musculus]
gi|30931371|gb|AAH52744.1| Bruno-like 4, RNA binding protein (Drosophila) [Mus musculus]
Length = 485
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|148664597|gb|EDK97013.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_d [Mus
musculus]
Length = 491
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 56 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 116 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 175
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 176 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 235
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 236 ADTDKERTMRRMQQMAGQ 253
>gi|189339278|ref|NP_795928.2| CUG-BP- and ETR-3-like factor 5 [Mus musculus]
Length = 395
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 157/310 (50%), Gaps = 45/310 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 65 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 124
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 125 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 184
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSYGLMQYR 241
Q+ Q L PSL LP PY+ Y SGSY
Sbjct: 185 MQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVA 233
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGL 298
PP + Q A +S N P P SG G AVPGL
Sbjct: 234 FPPCH-----------IQQIGA-------VSLNGLPATPIAPASGLHSPPLLGTAAVPGL 275
Query: 299 QYPMP--YPG 306
P+P +PG
Sbjct: 276 MAPIPNGFPG 285
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 344 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 402
LF+ IP+ +Q+L F+ FGR+ V D TGV K F++Y + SA A A
Sbjct: 8 KLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTA 67
Query: 403 MMNGCQLGGKKLKVQLKRDNKQNK 426
+ L G +Q+K + +++
Sbjct: 68 LHEQKTLPGMARPIQVKPADSESR 91
>gi|283838931|gb|ADB44797.1| FCA [Vitis vinifera]
Length = 281
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 117/175 (66%), Gaps = 3/175 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EA++A+ A
Sbjct: 103 KLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRA 162
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN+ TLPG P++V+YADGE ERL E+KLF+G L K +E EV +FS YG ++D+
Sbjct: 163 LHNQYTLPGGVGPIEVRYADGERERLGAVEYKLFVGSLNKQATEKEVKEIFSPYGQVEDV 222
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
++R + S+GC F+ + ++ A+AA+ A+NG + M+G PL V++AD ++ R
Sbjct: 223 YLMRDELKQSRGCGFVNFSHRDMAMAAINALNGIYTMKGCDQPLTVRFADPKRPR 277
>gi|395822986|ref|XP_003784782.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Otolemur
garnettii]
Length = 486
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|187761299|ref|NP_001020258.1| CUGBP Elav-like family member 4 isoform 2 [Homo sapiens]
Length = 485
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 53/90 (58%), Gaps = 20/90 (22%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG FVS+++PASAQ
Sbjct: 416 GPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASAQ 455
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 485
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|152013394|sp|Q7TSY6.2|CELF4_MOUSE RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
Length = 486
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|13123778|ref|NP_064565.1| CUGBP Elav-like family member 4 isoform 1 [Homo sapiens]
gi|397520308|ref|XP_003830262.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Pan paniscus]
gi|403265036|ref|XP_003924762.1| PREDICTED: CUGBP Elav-like family member 4 [Saimiri boliviensis
boliviensis]
gi|426385818|ref|XP_004059398.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Gorilla
gorilla gorilla]
gi|74761348|sp|Q9BZC1.1|CELF4_HUMAN RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|152013395|sp|Q5NVC8.2|CELF4_PONAB RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|12746394|gb|AAK07475.1|AF329265_1 CUG-BP and ETR-3 like factor 4 [Homo sapiens]
gi|119621802|gb|EAX01397.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_d [Homo
sapiens]
Length = 486
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|62087714|dbj|BAD92304.1| bruno-like 5, RNA binding protein variant [Homo sapiens]
Length = 421
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 55 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 114
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 115 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 174
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 175 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 234
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 235 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 259
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 335 SGGTGPPGAN-----------LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 383
S G PPG LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 38 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 97
Query: 384 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 98 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 141
>gi|291394300|ref|XP_002713553.1| PREDICTED: bruno-like 4, RNA binding protein-like [Oryctolagus
cuniculus]
Length = 485
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCPRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 53/90 (58%), Gaps = 20/90 (22%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG FVS+++PASAQ
Sbjct: 416 GPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASAQ 455
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 456 TAIQAMNGFQIGMKRLKVQLKRPKDTNRPY 485
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|344269050|ref|XP_003406368.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 2
[Loxodonta africana]
Length = 486
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|432852720|ref|XP_004067351.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 1
[Oryzias latipes]
Length = 481
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 452 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|348500286|ref|XP_003437704.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Oreochromis
niloticus]
Length = 481
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 121/187 (64%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 39 HDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 98
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 99 AQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEE 158
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 159 CTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRR 218
Query: 192 AQKAQSQ 198
+ Q
Sbjct: 219 MHQMAGQ 225
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 452 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|403220835|dbj|BAM38968.1| ribonucleoprotein [Theileria orientalis strain Shintoku]
Length = 604
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 198/424 (46%), Gaps = 61/424 (14%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+ ++P+ E + +F+EF V++V IIKDK T + C FV S +AD A+
Sbjct: 87 IKLFIARIPRDHKEEDIRKLFEEFGTVEDVTIIKDKATNVPKNCAFVKMASICQADAAIR 146
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+ +N+ T+ +Q++YA GE ERL KLF+G LP++ SE ++ L
Sbjct: 147 SLNNQHTVEPGLGAVQIRYATGEPERLGFTQMVGEPGVDTAKLFVGSLPRSFSEQDLQDL 206
Query: 123 FSIYGTIKDLQILRGSQQT-SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F YG + +++ +KGC F++ KEQAL A+ ++ K ++ S P+ V++A
Sbjct: 207 FKDYGDAVETFLMKDMNSGGNKGCGFVRMRYKEQALYAIRELDHKKMVKDSVKPIEVRFA 266
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGAL-----PMGYAPPYNGYGYQASGSYG 236
++ NA Q P L + P+ P G G +G YG
Sbjct: 267 QSK-------------------NAAPQDPRLMQRIKRPPPPLDGIFPNYGPGGNFNGGYG 307
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGF----VGSGY 292
++ R + G N GN + R Y P F V +G
Sbjct: 308 KLKKR-----KKNGASLGYMSYNNGNPRHAGAW--------REYISPDGRFYYFNVETG- 353
Query: 293 PAVPGLQYPMPYPGGML-GHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIP 351
Q+ +P L GH + A A NP++S + LF++HIP
Sbjct: 354 ----STQWEVPRDFLKLSGHGAGFGGYNNGGYAPA-GNPASSPGFNAVTDDSCLFVFHIP 408
Query: 352 QEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGG 411
++ + +L F FGRV+ AK+ D+AT SK + FVSY++P SA A+A MNG + G
Sbjct: 409 SQWNNSDLFRTFSPFGRVVKAKIVFDRATNRSKGYAFVSYDNPDSATQAVANMNGFSILG 468
Query: 412 KKLK 415
KKLK
Sbjct: 469 KKLK 472
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ KLFVG +P+ +E L +FK++ E ++KD + ++GC FV +++A A
Sbjct: 185 DTAKLFVGSLPRSFSEQDLQDLFKDYGDAVETFLMKDMNSGGNKGCGFVRMRYKEQALYA 244
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ +KK + + P++V++A
Sbjct: 245 IRELDHKKMVKDSVKPIEVRFA 266
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LFI IP++ ++++ F+ FG V + DKAT V K FV S A
Sbjct: 84 PASIKLFIARIPRDHKEEDIRKLFEEFGTVEDVTIIKDKATNVPKNCAFVKMASICQADA 143
Query: 400 AIAMMN 405
AI +N
Sbjct: 144 AIRSLN 149
>gi|432852722|ref|XP_004067352.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 2
[Oryzias latipes]
Length = 493
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ
Sbjct: 404 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQ 463
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 464 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 493
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|432852726|ref|XP_004067354.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 4
[Oryzias latipes]
Length = 494
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 121/187 (64%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 39 HDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 98
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 99 AQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEE 158
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 159 CTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRR 218
Query: 192 AQKAQSQ 198
+ Q
Sbjct: 219 MHQMAGQ 225
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ
Sbjct: 405 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQ 464
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 465 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 494
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|118103587|ref|XP_001231325.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 2 [Gallus
gallus]
Length = 483
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSCCLRQPCTKDRKLFVGMLNKQQSEDDVR 167
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 168 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 227
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 228 ADTDKERTMRRMQQMAGQ 245
>gi|289547698|ref|NP_001166144.1| CUGBP Elav-like family member 5 isoform 2 [Homo sapiens]
Length = 409
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 247
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 335 SGGTGPPGAN-----------LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 383
S G PPG LF+ IP+ +++L F+ FGR+ V D TG+
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 384 KCFGFVSYESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
K F++Y + SA A A+ L G +Q+K + +++
Sbjct: 86 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR 129
>gi|62858167|ref|NP_001016491.1| CUG-BP- and ETR-3-like factor 3 [Xenopus (Silurana) tropicalis]
gi|89272955|emb|CAJ83148.1| trinucleotide repeat containing 4 [Xenopus (Silurana) tropicalis]
Length = 313
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 123/184 (66%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA +
Sbjct: 7 IKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQS 66
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I + +
Sbjct: 67 ALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTV 126
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR Q+
Sbjct: 127 LRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRMQQ 186
Query: 195 AQSQ 198
+Q
Sbjct: 187 VANQ 190
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 4 PDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|26339326|dbj|BAC33334.1| unnamed protein product [Mus musculus]
Length = 484
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|417400799|gb|JAA47323.1| Putative rna-binding protein cugbp1/bruno rrm superfamily [Desmodus
rotundus]
Length = 429
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 120/196 (61%), Gaps = 9/196 (4%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSAL 122
A +A H +KTLPG + P+QVK AD E KLF+GML K SE +V L
Sbjct: 111 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRL 170
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+AD
Sbjct: 171 FEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFAD 230
Query: 183 TEKERQARRAQKAQSQ 198
T+KER RR Q+ Q
Sbjct: 231 TDKERTMRRMQQMAGQ 246
>gi|226371657|ref|NP_573458.2| CUGBP Elav-like family member 4 isoform D [Mus musculus]
Length = 484
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|208022666|ref|NP_001129075.1| CUG-BP- and ETR-3-like factor 5 [Rattus norvegicus]
Length = 395
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 129/217 (59%), Gaps = 12/217 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 65 QTALHEQKTLPGMARPIQVKPADSENRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 124
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 125 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 184
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
Q+ Q L PSL LP PY+ Y
Sbjct: 185 MQQMVGQLGIL------TPSL--TLPFS---PYSAYA 210
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 344 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA-IA 402
LF+ IP+ +Q+L F+ FGR+ V D TGV K F++Y + SA A A
Sbjct: 8 KLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTA 67
Query: 403 MMNGCQLGGKKLKVQLKRDNKQNK 426
+ L G +Q+K + +N+
Sbjct: 68 LHEQKTLPGMARPIQVKPADSENR 91
>gi|301769063|ref|XP_002919950.1| PREDICTED: CUGBP Elav-like family member 4-like [Ailuropoda
melanoleuca]
Length = 463
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 121/197 (61%), Gaps = 10/197 (5%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSA 121
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 111 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRR 170
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+A
Sbjct: 171 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINSLHGSQTMPGASSSLVVKFA 230
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 231 DTDKERTMRRMQQMAGQ 247
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|62089134|dbj|BAD93011.1| bruno-like 4, RNA binding protein variant [Homo sapiens]
Length = 510
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 75 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 134
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 135 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 194
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 195 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 254
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 255 ADTDKERTMRRMQQMAGQ 272
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 53/90 (58%), Gaps = 20/90 (22%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG FVS+++PASAQ
Sbjct: 441 GPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASAQ 480
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 481 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 510
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 81 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 140
>gi|207080190|ref|NP_001128833.1| CUGBP Elav-like family member 4 isoform 2 [Pongo abelii]
gi|55730138|emb|CAH91793.1| hypothetical protein [Pongo abelii]
Length = 456
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 120/196 (61%), Gaps = 9/196 (4%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSAL 122
A +A H +KTLPG + P+QVK AD E KLF+GML K SE +V L
Sbjct: 111 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRL 170
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+AD
Sbjct: 171 FEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFAD 230
Query: 183 TEKERQARRAQKAQSQ 198
T+KER RR Q+ Q
Sbjct: 231 TDKERTMRRMQQMAGQ 246
>gi|33872777|gb|AAH04167.2| Bruno-like 4, RNA binding protein (Drosophila) [Homo sapiens]
gi|37515278|gb|AAH01946.2| Bruno-like 4, RNA binding protein (Drosophila) [Homo sapiens]
Length = 484
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|294941928|ref|XP_002783310.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239895725|gb|EER15106.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 429
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 205/463 (44%), Gaps = 100/463 (21%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MA + E S VKLFV +P H E+ L A+F+E+ +V++V I++D++T SRG F
Sbjct: 4 MAADRMESTS----VKLFVRGLPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAF 59
Query: 61 V---ICPSRQEADKAVNA---CHNKKT--------------LPGASSPLQVKYADGELER 100
V PS A KA+N CHN T + PL V A GE ER
Sbjct: 60 VRFRDIPSGMAAIKALNGYRLCHNTSTSCIDNDVESVNDMSFAQSHIPLSVSLAQGEAER 119
Query: 101 L-----------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLK 149
L + KLF+ L E E+ +F +G I ++ + AF++
Sbjct: 120 LGMHGEVVATGGDTKLFVSGLGPGTQEEELRTIFEPFGRINEVHV----PGPHALYAFVR 175
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQH 209
+ KE AL A+ +NG+ +EGS PL VK A++ + R A Q Q
Sbjct: 176 FAEKEDALKAIREVNGRVTVEGSQRPLEVKVAESRAAKADRNAHHQQQQ----------- 224
Query: 210 PSLFGALPMGYAPPYNGYGYQASGSYG--LMQYRLPPMQNQPGFHGIIPPVNQG----NA 263
+GY+ G+ G LM + + P N
Sbjct: 225 -----------------HGYEGVGATGLRLMAGAAASLPINGATSSLTSPGRLDTPTING 267
Query: 264 MRGASPDLSSNMGPRNYAMPPSGFVGSGYP-----AVPGLQYPMPYPGGMLGHRPLNNSP 318
+RG SP S PR + F P +Q+ MP P+N
Sbjct: 268 IRGGSP--SGTQAPRTAGVWTEYFTMDDTPYYHNARTNEVQWEMPAE----FRNPIN--- 318
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
++ P T GPPGAN+F++ +P + + +L + F +FG ++SAKV VDK
Sbjct: 319 -------VHTAPQTK-----GPPGANVFVFWVPDAWTEDDLRDHFSSFGNIVSAKVVVDK 366
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNG-CQLGGKKLKVQLKR 420
TG+S+ +GF+SY++ SA A+A MNG G+++KVQ+K+
Sbjct: 367 HTGLSRGYGFISYDNAQSAGRAVAEMNGFVAANGRRIKVQIKK 409
>gi|187761301|ref|NP_001020259.1| CUGBP Elav-like family member 4 isoform 3 [Homo sapiens]
Length = 484
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 53/90 (58%), Gaps = 20/90 (22%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG FVS+++PASAQ
Sbjct: 415 GPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASAQ 454
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 455 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|148664594|gb|EDK97010.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_a [Mus
musculus]
Length = 485
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|410912254|ref|XP_003969605.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Takifugu
rubripes]
Length = 481
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 121/187 (64%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 39 HDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 98
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 99 AQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFESFGQIEE 158
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 159 CTVLRGPDGASKGCAFVKFSSHGEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRR 218
Query: 192 AQKAQSQ 198
+ Q
Sbjct: 219 MHQMAGQ 225
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 452 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|432852728|ref|XP_004067355.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 5
[Oryzias latipes]
Length = 443
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ
Sbjct: 354 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQ 413
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 414 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 443
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 44 LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSAL 103
>gi|390344759|ref|XP_782270.3| PREDICTED: CUGBP Elav-like family member 1-A-like
[Strongylocentrotus purpuratus]
Length = 605
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 122/192 (63%), Gaps = 4/192 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF EF V E+N+++DK T S+GC FV S ADKA
Sbjct: 55 DSLKMFVGQIPKAYEEDKLREMFSEFGPVYELNVLRDKKTGESKGCAFVTFYSGVVADKA 114
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN+K LPG P+Q+K AD E+E E KLF+GML K E++V +FS +G+I++
Sbjct: 115 QKELHNRKVLPGMRHPIQMKPADCEVE--ERKLFVGMLSKKCDESDVRIMFSAFGSIEEC 172
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR KGCAF+ Y T++ AL + +++ M+G + LVVK+ADT+KE++ ++
Sbjct: 173 HILRDQMGGHKGCAFVTYATRQMALNCIRSMHQSRIMDGCTSKLVVKFADTQKEKEQKKL 232
Query: 193 QKAQSQA--NNL 202
Q+ Q NNL
Sbjct: 233 QQMAQQMCYNNL 244
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 386
GP GANLFIYH+PQ++ D +L + F +G +LSAKVF+DK T +SKCF
Sbjct: 544 GPEGANLFIYHLPQDYTDTDLISMFSPYGGILSAKVFIDKNTNLSKCF 591
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 309 LGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP--------GANLFIYHIPQEFGDQELG 360
+ +RPL +P S P + N T G PP +F+ IP+ + + +L
Sbjct: 21 MNNRPLTGNPDS--PMMMN----TGEISGVPPPQTAQPDPDSLKMFVGQIPKAYEEDKLR 74
Query: 361 NAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 400
F FG V V DK TG SK FV++ S A A
Sbjct: 75 EMFSEFGPVYELNVLRDKKTGESKGCAFVTFYSGVVADKA 114
>gi|326675888|ref|XP_003200459.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Danio rerio]
Length = 516
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 120/186 (64%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A KA
Sbjct: 32 DAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKA 91
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E E KLF+GML K E +V LF +G I++
Sbjct: 92 QSALHEQKTLPGMNRPIQVKPADSEGRGEERKLFVGMLGKQQCEEDVRCLFEAFGQIEEC 151
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 152 TVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRRM 211
Query: 193 QKAQSQ 198
+ Q
Sbjct: 212 HQMAGQ 217
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 324 AVANSNPSTSSSGGTGP----PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
+ ANS+ + +G T P LFI IP+ +++L F+ FG++ V D+
Sbjct: 11 STANSSGNGRMNGLTIPLKDHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRF 70
Query: 380 TGVSKCFGFVSY---ESPASAQNAI 401
TG+ K F++Y ES AQ+A+
Sbjct: 71 TGMHKGCAFLTYCARESALKAQSAL 95
>gi|56403901|emb|CAI29735.1| hypothetical protein [Pongo abelii]
Length = 486
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 120/197 (60%), Gaps = 10/197 (5%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALK 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSA 121
A +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 111 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRR 170
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LV K+A
Sbjct: 171 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVAKFA 230
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 231 DTDKERTMRRMQQMAGQ 247
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 53/90 (58%), Gaps = 20/90 (22%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG FVS+++PASAQ
Sbjct: 417 GPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASAQ 456
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 457 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 486
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|197097518|ref|NP_001127577.1| CUGBP Elav-like family member 4 isoform 1 [Pongo abelii]
gi|55732010|emb|CAH92712.1| hypothetical protein [Pongo abelii]
Length = 457
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 119/196 (60%), Gaps = 9/196 (4%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYSERESALK 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSAL 122
A +A H +KTLPG + P+QVK AD E KL +GML K SE +V L
Sbjct: 111 AQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLLVGMLNKQQSEDDVRRL 170
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+AD
Sbjct: 171 FEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFAD 230
Query: 183 TEKERQARRAQKAQSQ 198
T+KER RR Q+ Q
Sbjct: 231 TDKERTMRRMQQMAGQ 246
>gi|148228597|ref|NP_001084196.1| CUGBP Elav-like family member 1-A [Xenopus laevis]
gi|82227733|sp|O57406.1|CEL1A_XENLA RecName: Full=CUGBP Elav-like family member 1-A; Short=CELF-1A;
AltName: Full=Bruno-like protein 2-A; AltName: Full=CUG
triplet repeat RNA-binding protein 1-A; Short=CUG-BP1-A;
AltName: Full=CUG-BP- and ETR-3-like factor 1-A;
AltName: Full=Embryo deadenylation element-binding
protein A; Short=EDEN-BP-A; AltName: Full=RNA-binding
protein BRUNOL-2-A; AltName: Full=p53/p55
gi|2781419|gb|AAC41243.1| embryo deadenylation element binding protein [Xenopus laevis]
gi|80478529|gb|AAI08575.1| CUGBP1 protein [Xenopus laevis]
Length = 489
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 132/206 (64%), Gaps = 4/206 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E +L +F+++ V E+N+++D++ S+GCCF+ +R+ A
Sbjct: 14 DSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ KN +E ++ A+FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMVSKNCNENDIRAMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGMSRGCAFVTFTTRSMAQMAIKSMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFG 214
+R + Q NA S +L G
Sbjct: 194 QKRMTQQLQQQMQQLNAASMWGNLTG 219
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+S+KVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 400 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQTNLSKCFGFVSYDNPVSAQ 459
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K+ E + AMF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMVSKNCNENDIRAMFSPFGQIEECRILRGPDGM-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRSMAQMAIKSMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 197
>gi|449668124|ref|XP_002167931.2| PREDICTED: CUGBP Elav-like family member 2-like [Hydra
magnipapillata]
Length = 511
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLF+GQVP++ TE +L + + + + E++I+ DK T +GC F++ ++ A++
Sbjct: 19 EACKLFIGQVPRNWTEKELRPILEPYGEIHELSILYDKYTGQHKGCAFLVFYEKEAANRC 78
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N H K+TLPG+ + +QVK A+ E++ + KLFIGML K ++E ++ +FS YGTI++L
Sbjct: 79 QNELHEKRTLPGSVNKMQVKPAESEIKTEDRKLFIGMLSKKLNEDDLRIMFSPYGTIEEL 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR SKGCAF+KY T+ QA A++A++ ME S P+VVK ADTE+E+ +R
Sbjct: 139 TILRNPDGGSKGCAFIKYSTRLQAQNAIKAMHNSQTMENCSSPVVVKIADTEREKIQKR- 197
Query: 193 QKAQSQANNL 202
QS A NL
Sbjct: 198 --MQSMATNL 205
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++ SA
Sbjct: 421 GPDGANLFIYHLPQEFTDADLMQTFMPFGNVVSAKVFIDKPTLLSKCFGFVSYDNSLSAT 480
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
NAI M+G +G K+LKVQLKR K KPY
Sbjct: 481 NAINAMHGFSIGSKRLKVQLKRP-KDKKPY 509
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E + E KLF+G + K + E L MF + ++E+ I+++ S+GC F+ +R
Sbjct: 101 ESEIKTEDRKLFIGMLSKKLNEDDLRIMFSPYGTIEELTILRNPDG-GSKGCAFIKYSTR 159
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+A A+ A HN +T+ SSP+ VK AD E E+++ ++
Sbjct: 160 LQAQNAIKAMHNSQTMENCSSPVVVKIADTEREKIQKRM 198
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
++K+ +K + LF+ +P+ T+A L+ F F V + DK T S+ FV
Sbjct: 413 QAKQPQKEGPDGANLFIYHLPQEFTDADLMQTFMPFGNVVSAKVFIDKPTLLSKCFGFVS 472
Query: 63 CPSRQEADKAVNACH 77
+ A A+NA H
Sbjct: 473 YDNSLSATNAINAMH 487
>gi|357155243|ref|XP_003577055.1| PREDICTED: flowering time control protein FCA-like [Brachypodium
distachyon]
Length = 749
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F + V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 127 VKLFVGSVPRTANEDDVRPLFADHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 186
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +FS +G ++D
Sbjct: 187 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFSPFGHVED 246
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 247 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYVMRGCEQPLIVRFADPKRPR 302
>gi|22760138|dbj|BAC11082.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+G++P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGRIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEEDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGGQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERMMRRMQQMAGQ 246
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 53/90 (58%), Gaps = 20/90 (22%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG FVS+++PASAQ
Sbjct: 415 GPEGCNLFIYHLPQEFGDAELMQMFLPFG--------------------FVSFDNPASAQ 454
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 455 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQ+A+
Sbjct: 56 LFIGRIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115
>gi|294886537|ref|XP_002771747.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239875509|gb|EER03563.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 422
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 206/462 (44%), Gaps = 105/462 (22%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MA + E S VKLFV +P H E+ L A+F+E+ +V++V I++D++T SRG F
Sbjct: 4 MAADRMESTS----VKLFVRGLPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAF 59
Query: 61 V---ICPSRQEADKAVNA---CHNKKT--------------LPGASSPLQVKYADGELER 100
V PS A KA+N HN T + PL V A GE ER
Sbjct: 60 VRFRDIPSGMAAIKALNGHRLSHNTSTSCIDNDVESVDDMSFDQSHIPLSVSLAQGEAER 119
Query: 101 L-----------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLK 149
L + KLF+ L E E+ +F +G I ++ + G AF++
Sbjct: 120 LGMHGEVVATGGDTKLFVSGLGPATQEEELRTIFEPFGRINEVHVP-GPHAL---YAFVR 175
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQH 209
+ KE AL A+ +NG+ +EGS PL VK A++ + R A Q Q
Sbjct: 176 FAEKEDALKAIREVNGRVTVEGSQRPLEVKVAESRAAKADRNAHHHQQQ----------- 224
Query: 210 PSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMR---- 265
+GY+ G+Y P + G+ G P + G R
Sbjct: 225 -----------------HGYEG-GAYD-------PTTSSSGYGGSPPLIAAGGTSRPLFK 259
Query: 266 -GASPDLSSNMGPRNYAMPPSGFVGSGYP-----AVPGLQYPMPYPGGMLGHRPLNNSPG 319
G + D + PR + F P +Q+ MP P+N
Sbjct: 260 AGMAADPARTQAPRTAGVWTEYFTMDDTPYYHNARTNEVQWEMPAEF----RNPIN---- 311
Query: 320 SVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
++ P T GPPGAN+F++ +P + + +L + F +FG ++SAKV VDK
Sbjct: 312 ------VHTAPQTK-----GPPGANVFVFSVPDAWTEDDLRDHFSSFGNIVSAKVVVDKH 360
Query: 380 TGVSKCFGFVSYESPASAQNAIAMMNG-CQLGGKKLKVQLKR 420
TG+S+ +GF+SY++ SA A+A MNG G+++KVQ+K+
Sbjct: 361 TGLSRGYGFISYDNAQSAGRAVAEMNGFVAANGRRIKVQIKK 402
>gi|32482079|gb|AAP84395.1| FCA protein [Triticum aestivum]
Length = 734
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 117 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 176
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 177 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 236
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PLVV++AD ++ R
Sbjct: 237 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLVVRFADPKRPR 292
>gi|85376478|gb|ABC70476.1| bruno-like [Schmidtea mediterranea]
Length = 404
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 172/373 (46%), Gaps = 66/373 (17%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLFIGML KN SE +V L YG IK+ IL+ S SKGCAF+ Y ++A A+E++
Sbjct: 35 KLFIGMLNKNQSEDDVRQLCEPYGCIKNCMILKDSYGNSKGCAFVTYNNSDEANMAIESL 94
Query: 164 NG-KHKME----GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPM 218
NG K M GS + V + AD E+ERQ R+ Q P P G
Sbjct: 95 NGMKTSMACPELGSCI--VARLADNEQERQLRKMQMQ------FPAIQLLTPQNVGYYNQ 146
Query: 219 GYAP------PY----------NGYGYQASGSYGLMQYRLPPMQN-------QPGF---- 251
G P P+ N Y Q S PP+ N QP
Sbjct: 147 GIVPMILQQFPHATDQQTANLINAYALQMHLSQMYSPNLTPPLVNSSPSVTPQPQIGVPM 206
Query: 252 --------------HGIIPPVNQGNAMRGASPDLSSNMGPRNYAM---------PPSGFV 288
H ++P +N N SP L+S + P + + P + +
Sbjct: 207 SAANDISSNQCSMNHFVLPSINNENI--PLSPALNSYINPAHPQLINIANINFTPEALHL 264
Query: 289 GSGYPAVPGLQYPMPYPG-GMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFI 347
S Y P + + P G+ G N+ N + TGP G NLFI
Sbjct: 265 PSLYSMFPQCGFNLNTPALGLSGQNIYPNTTALSLQYQQNQKDGIKDNIVTGPEGCNLFI 324
Query: 348 YHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGC 407
YH+PQ+FGD L F FG V+SAKV++D+AT SKCFGFVS+++ ++A+ AI MNG
Sbjct: 325 YHLPQDFGDAALAQLFTPFGNVISAKVYLDRATNQSKCFGFVSFDNASNAEAAIRGMNGF 384
Query: 408 QLGGKKLKVQLKR 420
Q+G K+LKVQLKR
Sbjct: 385 QIGTKRLKVQLKR 397
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
++ +E KLF+G + K+ +E + + + + + I+KD S+GC FV + E
Sbjct: 28 QNHDENTKLFIGMLNKNQSEDDVRQLCEPYGCIKNCMILKDSYGN-SKGCAFVTYNNSDE 86
Query: 69 ADKAVNACHNKKT---LPGASSPLQVKYADGELERLEHKL 105
A+ A+ + + KT P S + + AD E ER K+
Sbjct: 87 ANMAIESLNGMKTSMACPELGSCIVARLADNEQERQLRKM 126
>gi|380024253|ref|XP_003695918.1| PREDICTED: CUGBP Elav-like family member 3-like [Apis florea]
Length = 269
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 157/310 (50%), Gaps = 45/310 (14%)
Query: 120 SALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
S L ++G +D +G ++ ++ GCAF+K + ++ALAA+ ++G M G+S LVV
Sbjct: 4 SPLMKVWG--QDGMGTKGHRKENQCGCAFVKLSSHQEALAAINTLHGSQTMPGASSSLVV 61
Query: 179 KWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLM 238
K+ADTEKERQ RR Q+ A N M P+N + +
Sbjct: 62 KFADTEKERQLRRMQQ---MAGN----------------MSLLNPFNVFNQFGAYGAYAQ 102
Query: 239 QYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGL 298
Q I P + G P + M N +PP+ S YPAV G
Sbjct: 103 QQAALMAAATAQGTYINPMAALAHVGAGQLPHALNGM--PNPVVPPT----SAYPAVYG- 155
Query: 299 QYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQE 358
Q+P P M P S+S GP G NLFIYH+PQEFGD E
Sbjct: 156 QFPQAIPQPMTAVAPTQREGCSIS----------------GPEGCNLFIYHLPQEFGDGE 199
Query: 359 LGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 418
L F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQL
Sbjct: 200 LMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQL 259
Query: 419 KRDNKQNKPY 428
KR ++PY
Sbjct: 260 KRPKDASRPY 269
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
GC FV S QEA A+N H +T+PGASS L VK+AD E ER ++
Sbjct: 27 GCAFVKLSSHQEALAAINTLHGSQTMPGASSSLVVKFADTEKERQLRRM 75
>gi|32482371|gb|AAP84378.1| FCA protein [Triticum aestivum]
Length = 736
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRNTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
>gi|324505949|gb|ADY42547.1| CUGBP Elav family member 4 [Ascaris suum]
Length = 476
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 119/192 (61%), Gaps = 6/192 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 31 DAIKLFVGQIPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSALRC 90
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V ALF+ +
Sbjct: 91 QAALHDQKTLPGMNRAMQVKPADSESRPNSPKNAEERKLFVGMLSKQQNEDDVRALFAPF 150
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 151 GAIDEVTVLRGADGLSKGCAFVKFAAHSQAAMAISALHGSQTMPGASSSLVVKFADTEKE 210
Query: 187 RQARRAQKAQSQ 198
RQ RR Q+ +Q
Sbjct: 211 RQLRRMQQMAAQ 222
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGF+SY++ ASA
Sbjct: 389 GPEGCNLFIYHLPQEFGDAELMQMFMPFGHVISAKVFIDRATNQSKCFGFISYDNSASAM 448
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 449 AAIQAMNGFQIGMKRLKVQLKR--PRDKPY 476
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K++EER KLFVG + K E + A+F F +DEV +++ S+GC FV + +
Sbjct: 122 KNAEER-KLFVGMLSKQQNEDDVRALFAPFGAIDEVTVLRG-ADGLSKGCAFVKFAAHSQ 179
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELER 100
A A++A H +T+PGASS L VK+AD E ER
Sbjct: 180 AAMAISALHGSQTMPGASSSLVVKFADTEKER 211
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 14/115 (12%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPP-----GANLFIYHIPQEFGDQELGNAFQAFGRVLSAK 373
G++SPA SS+ G P LF+ IP+ +++L + F++FG++
Sbjct: 12 GALSPA--------SSTDSNGFPVKDSDAIKLFVGQIPRNLEEKDLRHLFESFGKIYEFT 63
Query: 374 VFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 427
+ DK TG+ K F++Y SA A ++ + L G +Q+K + +++P
Sbjct: 64 ILKDKYTGLHKGCAFLTYCHRDSALRCQAALHDQKTLPGMNRAMQVKPADSESRP 118
>gi|324501916|gb|ADY40847.1| CUGBP Elav family member 4 [Ascaris suum]
Length = 501
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 119/192 (61%), Gaps = 6/192 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 31 DAIKLFVGQIPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSALRC 90
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V ALF+ +
Sbjct: 91 QAALHDQKTLPGMNRAMQVKPADSESRPNSPKNAEERKLFVGMLSKQQNEDDVRALFAPF 150
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 151 GAIDEVTVLRGADGLSKGCAFVKFAAHSQAAMAISALHGSQTMPGASSSLVVKFADTEKE 210
Query: 187 RQARRAQKAQSQ 198
RQ RR Q+ +Q
Sbjct: 211 RQLRRMQQMAAQ 222
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGF+SY++ ASA
Sbjct: 414 GPEGCNLFIYHLPQEFGDAELMQMFMPFGHVISAKVFIDRATNQSKCFGFISYDNSASAM 473
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 474 AAIQAMNGFQIGMKRLKVQLKR--PRDKPY 501
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K++EER KLFVG + K E + A+F F +DEV +++ S+GC FV + +
Sbjct: 122 KNAEER-KLFVGMLSKQQNEDDVRALFAPFGAIDEVTVLRG-ADGLSKGCAFVKFAAHSQ 179
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELER 100
A A++A H +T+PGASS L VK+AD E ER
Sbjct: 180 AAMAISALHGSQTMPGASSSLVVKFADTEKER 211
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 14/115 (12%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPP-----GANLFIYHIPQEFGDQELGNAFQAFGRVLSAK 373
G++SPA SS+ G P LF+ IP+ +++L + F++FG++
Sbjct: 12 GALSPA--------SSTDSNGFPVKDSDAIKLFVGQIPRNLEEKDLRHLFESFGKIYEFT 63
Query: 374 VFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 427
+ DK TG+ K F++Y SA A ++ + L G +Q+K + +++P
Sbjct: 64 ILKDKYTGLHKGCAFLTYCHRDSALRCQAALHDQKTLPGMNRAMQVKPADSESRP 118
>gi|410920283|ref|XP_003973613.1| PREDICTED: CUGBP Elav-like family member 4-like [Takifugu rubripes]
Length = 530
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 121/193 (62%), Gaps = 6/193 (3%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A K
Sbjct: 48 HDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALK 107
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A NA H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 108 AQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGCIEE 167
Query: 132 LQILRGSQQTSKG------CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
ILRG SKG C+ +K+ + +A AA+ A++G M G+S LVVK+ADT+K
Sbjct: 168 CTILRGPDGNSKGELGAASCSIVKFSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDK 227
Query: 186 ERQARRAQKAQSQ 198
ER RR Q+ Q
Sbjct: 228 ERTIRRMQQMAGQ 240
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 75/110 (68%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A + P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 421 GQISQAFPHPPPIIPQQQREGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDR 480
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 481 ATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 530
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F++Y ES AQNA+
Sbjct: 53 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNAL 112
>gi|32482142|gb|AAP84417.1| FCA-A1 [Triticum aestivum]
gi|32482144|gb|AAP84418.1| FCA-A2 [Triticum aestivum]
Length = 741
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 124 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 183
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 184 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 243
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 244 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 299
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 126 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 185
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 186 HNQCTIPGAMGPVQVR 201
>gi|32482390|gb|AAP84384.1| FCA protein [Triticum aestivum]
Length = 737
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 122 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 181
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 182 HNQCTIPGAMGPVQVR 197
>gi|328871825|gb|EGG20195.1| hypothetical protein DFA_07315 [Dictyostelium fasciculatum]
Length = 551
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFA-LVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
VK+F+GQ+PK TE L MF +F ++E+ +I++K T+ +GC F+ + A+K++
Sbjct: 5 VKIFIGQIPKSFTEDDLREMFADFVDSIEEIKVIRNKATQEPQGCAFITMTNPDVAEKSI 64
Query: 74 NACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HN K PG S+ LQVKYAD E E+L KLF+GMLPK +E +V LFS YG + ++
Sbjct: 65 QQLHNSKKFPGVSNFLQVKYADSEQEKLSTKLFVGMLPKEYNEDDVRKLFSDYGDVDEIC 124
Query: 134 ILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
ILRG SK C F+K++++E L A+ ++NG ++ S LVVK+ADTEK+R+ +
Sbjct: 125 ILRGPNNQSKSCGFIKFQSRESCLNAISSLNGI-RIPPSPHNLVVKFADTEKDRKNK 180
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
GP G+NLF+Y+IP + D EL F FG V+S+KVF+DK TG SK FGFVS+++P SA
Sbjct: 463 VGPSGSNLFVYNIPNFYTDVELSVLFDPFGAVISSKVFIDKNTGTSKGFGFVSFDNPNSA 522
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI +NG L GKKLKV +K N + PY
Sbjct: 523 TTAITNLNGMMLNGKKLKVTVK--NSNSNPY 551
>gi|32482147|gb|AAP84419.1| FCA-B2 [Triticum aestivum]
Length = 740
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 182 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 297
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 112 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 168
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 169 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 207
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 124 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 183
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 184 HNQCTIPGAMGPVQVR 199
>gi|32482140|gb|AAP84416.1| FCA protein, partial [Triticum aestivum]
Length = 740
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 110 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 166
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 167 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 205
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 122 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 181
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 182 HNQCTIPGAMGPVQVR 197
>gi|32482094|gb|AAP84400.1| FCA protein [Triticum aestivum]
Length = 737
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 121 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 180
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 181 HNQCTIPGAMGPVQVR 196
>gi|32482114|gb|AAP84409.1| FCA protein [Triticum aestivum]
Length = 736
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 121 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 180
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 181 HNQCTIPGAMGPVQVR 196
>gi|32482081|gb|AAP84396.1| FCA protein [Triticum aestivum]
Length = 719
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 116 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 175
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 176 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 235
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 236 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 291
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 118 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 177
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 178 HNQCTIPGAMGPVQVR 193
>gi|32482092|gb|AAP84399.1| FCA protein [Triticum aestivum]
Length = 740
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 124 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 183
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 184 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 243
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 244 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 299
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 126 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 185
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 186 HNQCTIPGAMGPVQVR 201
>gi|32482123|gb|AAP84412.1| FCA protein, partial [Triticum aestivum]
Length = 737
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 122 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 181
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 182 HNQCTIPGAMGPVQVR 197
>gi|32482106|gb|AAP84405.1| FCA protein [Triticum aestivum]
Length = 735
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD + R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPRRPR 293
>gi|198431449|ref|XP_002130974.1| PREDICTED: similar to HrETR-1 [Ciona intestinalis]
Length = 538
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 122/190 (64%)
Query: 5 KKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICP 64
K+ + ++ VKLF+GQVPK+ E +L +F F + E+++++DK T +GC F+
Sbjct: 65 KETPEKDDDAVKLFIGQVPKNWEEKELRQVFAPFGEIFELSVLRDKYTGMHKGCAFLTYT 124
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFS 124
+ A A N+ H +KTLPG + P+QVK AD + + KLF+GML K +E +V LF
Sbjct: 125 QKTSAMNAQNSLHERKTLPGMNHPIQVKPADTVSKGEDRKLFVGMLGKRQNEDDVRILFE 184
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+GTI++ ILR + SKGCAF+K ++A +A+EA++G M G+S LVVK+ADT+
Sbjct: 185 PFGTIEECTILRTPEGQSKGCAFVKLSCHQEAKSAMEALHGSQTMPGASSSLVVKFADTD 244
Query: 185 KERQARRAQK 194
KER RR Q+
Sbjct: 245 KERAVRRMQQ 254
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 75/98 (76%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
ST++ GP G NLFIYH+PQEF D +L N FQ FG V+SAKVF+D+AT SKCFGFVS
Sbjct: 441 STNAPQKEGPDGCNLFIYHLPQEFSDADLANVFQPFGNVISAKVFIDRATNQSKCFGFVS 500
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+++ S+Q AI MNG Q+G K+LKVQLKR +Q++PY
Sbjct: 501 FDNAISSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY 538
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNA 400
LFI +P+ + ++EL F FG + V DK TG+ K F++Y SA NA
Sbjct: 74 AVKLFIGQVPKNWEEKELRQVFAPFGEIFELSVLRDKYTGMHKGCAFLTYTQKTSAMNA 132
>gi|32482108|gb|AAP84406.1| FCA protein [Triticum aestivum]
Length = 724
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 107 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 166
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 167 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 226
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 227 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 282
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 109 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 168
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 169 HNQCTIPGAMGPVQVR 184
>gi|32482125|gb|AAP84413.1| FCA protein, partial [Triticum aestivum]
Length = 722
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 114 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 173
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 174 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 233
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 234 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 289
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 104 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 160
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 161 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 199
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 116 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 175
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 176 HNQCTIPGAMGPVQVR 191
>gi|32482065|gb|AAP84389.1| FCA protein [Triticum aestivum]
Length = 739
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 123 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 182
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 183 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 242
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ +++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 243 VYVMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 298
>gi|289547568|ref|NP_001166111.1| CUGBP Elav-like family member 1 isoform 5 [Homo sapiens]
Length = 485
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 133
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 193
Query: 190 RR 191
+R
Sbjct: 194 KR 195
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 374 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 433
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 434 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 151
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 152 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 196
>gi|32482090|gb|AAP84398.1| FCA protein [Triticum aestivum]
Length = 719
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 104 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 163
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 164 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 223
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 224 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 279
>gi|32482074|gb|AAP84393.1| FCA protein [Triticum aestivum]
Length = 724
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 107 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 166
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 167 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 226
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 227 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 282
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 109 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 168
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 169 HNQCTIPGAMGPVQVR 184
>gi|32482116|gb|AAP84410.1| FCA protein [Triticum aestivum]
Length = 707
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 102 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 161
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 162 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 221
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 222 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 277
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 92 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 148
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 149 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 187
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 104 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 163
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 164 HNQCTIPGAMGPVQVR 179
>gi|32482149|gb|AAP84420.1| FCA-D1 [Triticum aestivum]
Length = 659
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 39 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVEYATSEEAERAIR 98
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 99 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 158
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 159 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 214
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 29 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 85
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+Y T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 86 EYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 124
>gi|289547566|ref|NP_001166110.1| CUGBP Elav-like family member 1 isoform 4 [Homo sapiens]
gi|109106411|ref|XP_001106041.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 4 [Macaca
mulatta]
gi|296218064|ref|XP_002755281.1| PREDICTED: CUGBP Elav-like family member 1 [Callithrix jacchus]
gi|332259914|ref|XP_003279029.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|397488336|ref|XP_003815223.1| PREDICTED: CUGBP Elav-like family member 1 [Pan paniscus]
gi|402893566|ref|XP_003909963.1| PREDICTED: CUGBP Elav-like family member 1 isoform 1 [Papio anubis]
gi|168275618|dbj|BAG10529.1| CUG triplet repeat RNA-binding protein 1 [synthetic construct]
Length = 512
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 401 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 460
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|338712047|ref|XP_003362650.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 2 [Equus
caballus]
gi|345783916|ref|XP_003432496.1| PREDICTED: CUGBP, Elav-like family member 1 [Canis lupus
familiaris]
gi|410973717|ref|XP_003993294.1| PREDICTED: CUGBP Elav-like family member 1 isoform 1 [Felis catus]
Length = 512
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 401 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 460
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|301772548|ref|XP_002921692.1| PREDICTED: CUGBP Elav-like family member 1-like [Ailuropoda
melanoleuca]
Length = 512
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 401 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 460
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|440903464|gb|ELR54119.1| CUGBP Elav-like family member 1 [Bos grunniens mutus]
Length = 512
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 423 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 482
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 483 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|62857945|ref|NP_001017152.1| CUGBP Elav-like family member 1 [Xenopus (Silurana) tropicalis]
gi|123910258|sp|Q28HE9.1|CELF1_XENTR RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|89272922|emb|CAJ82289.1| CUG triplet repeat, RNA binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 490
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E +L +F+++ V E+N+++D++ S+GCCF+ +R+ A
Sbjct: 14 DSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLF+GM+ K +E ++ A+FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFVGMVSKKCNENDIRAMFSQFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEESRILRGPDGMSRGCAFVTFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY 224
+R + Q NA S +L G + AP Y
Sbjct: 194 QKRMTQQLQQQMQQLNAASMWGNLAGLSSL--APQY 227
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 401 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 460
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLFVG V K E + AMF +F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFVGMVSKKCNENDIRAMFSQFGQIEESRILRGPDGM-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 197
>gi|32482394|gb|AAP84386.1| FCA protein [Triticum aestivum]
Length = 735
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L + + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNRQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|32482100|gb|AAP84402.1| FCA protein [Triticum aestivum]
Length = 736
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F+ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFENHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
>gi|344281041|ref|XP_003412289.1| PREDICTED: CUGBP Elav-like family member 1-like [Loxodonta
africana]
Length = 512
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 401 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 460
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|348545314|ref|XP_003460125.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 1
[Oreochromis niloticus]
Length = 509
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV SR+ A
Sbjct: 41 DAIKMFVGQIPRSWSEEQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYSRKSAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS YG I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRLMFSPYGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 77/104 (74%)
Query: 325 VANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 384
++ N S + S GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SK
Sbjct: 406 LSQQNVSAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSK 465
Query: 385 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
CFGFVSY++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 466 CFGFVSYDNPVSSQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRM 223
>gi|82237708|sp|Q6PF35.1|CEL1B_XENLA RecName: Full=CUGBP Elav-like family member 1-B; Short=CELF-1B;
AltName: Full=Bruno-like protein 2-B; AltName: Full=CUG
triplet repeat RNA-binding protein 1-B; Short=CUG-BP1-B;
AltName: Full=CUG-BP- and ETR-3-like factor 1-B;
AltName: Full=Embryo deadenylation element-binding
protein B; Short=EDEN-BP-B; AltName: Full=RNA-binding
protein BRUNOL-2-B; AltName: Full=p53/p55
gi|34784678|gb|AAH57743.1| Cugbp1-b protein [Xenopus laevis]
Length = 489
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E +L +F+++ V E+N+++D++ S+GCCF+ +R+ A
Sbjct: 14 DSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ LFS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMVSKKCNENDIRTLFSQFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFG 214
+R + Q NA S +L G
Sbjct: 194 QKRMTQQLQQQMQQLNAASMWGNLAG 219
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGF+SY++P SAQ
Sbjct: 400 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQTNLSKCFGFISYDNPVSAQ 459
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
>gi|291232672|ref|XP_002736280.1| PREDICTED: bruno-2-like [Saccoglossus kowalevskii]
Length = 500
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 120/185 (64%), Gaps = 6/185 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E L +EF V ++N+++DK T SRGCCFV +R+ A +A
Sbjct: 30 DAIKMFVGQIPRSMDENDLREFLEEFGPVYQLNVLRDKVTGQSRGCCFVTYYTRKAALQA 89
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT+PG +Q+K AD E E KLF+GM+ K +E ++ +F+ +G+I++
Sbjct: 90 QNALHNVKTMPGMHHRIQMKPADSENRNEERKLFVGMISKKCNEGDIRLMFAPFGSIEEC 149
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK---MEGSSVPLVVKWADTEKERQA 189
+LR +Q SKGCAF+ + +K+ +AL AI KH+ MEG S L V++A+T KER
Sbjct: 150 TVLRDAQGVSKGCAFITFSSKQ---SALNAIQNKHQSVTMEGCSSSLQVRFAETVKERDQ 206
Query: 190 RRAQK 194
+R +K
Sbjct: 207 KRMRK 211
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 306 GGMLGHRPLNNSPGSVSPAVANSNPSTSS---SGGTGPPGANLFIYHIPQEFGDQELGNA 362
GG+ G P +N + S +A + ++ SG TG PG + G G
Sbjct: 377 GGLTGDSPTSNCTNNGSNLIAAAGLASGLQGLSGSTGLPGDANWSGVAGSMNGLGSTGLN 436
Query: 363 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
G + +G+ + GFVSY++P SAQ AI MNG Q+G K+LKVQLK+
Sbjct: 437 SNLSGNAVDMNALSQAYSGIQQYAGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKK-- 494
Query: 423 KQNKPY 428
++KPY
Sbjct: 495 SKDKPY 500
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES-PASAQ 398
P +F+ IP+ + +L + FG V V DK TG S+ FV+Y + A+ Q
Sbjct: 29 PDAIKMFVGQIPRSMDENDLREFLEEFGPVYQLNVLRDKVTGQSRGCCFVTYYTRKAALQ 88
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
A+ N + G ++Q+K + +N+
Sbjct: 89 AQNALHNVKTMPGMHHRIQMKPADSENR 116
>gi|32482383|gb|AAP84381.1| FCA protein [Triticum aestivum]
Length = 737
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIGEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAATNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 110 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 166
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 167 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 205
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 122 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 181
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 182 HNQCTIPGAMGPVQVR 197
>gi|334331817|ref|XP_001364287.2| PREDICTED: CUGBP Elav-like family member 1-like [Monodelphis
domestica]
Length = 512
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DSIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 401 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 460
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 461 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 512
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 223
>gi|68533093|dbj|BAE06101.1| CUGBP1 variant protein [Homo sapiens]
Length = 544
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 73 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 132
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 133 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 192
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 193 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 252
Query: 190 RR 191
+R
Sbjct: 253 KR 254
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 433 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 492
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 493 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 544
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 153 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 210
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 211 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 255
>gi|32482061|gb|AAP84388.1| FCA protein [Triticum aestivum]
Length = 737
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIK 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFAKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 122 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIKAL 181
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 182 HNQCTIPGAMGPVQVR 197
>gi|148694025|gb|EDL25972.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_a [Mus
musculus]
Length = 465
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 47 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 106
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 107 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 166
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 167 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 226
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 227 RMQQMAGQLGAF------HPA---PLPLGACGAYT 252
>gi|32482381|gb|AAP84380.1| FCA protein [Triticum aestivum]
Length = 721
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F+ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 104 VKLFVGSVPRTANEDDVRPLFEGHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 163
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 164 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 223
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+++++G + M G PL+V++AD ++ R
Sbjct: 224 VYIMKDGMRQSRGCGFVKFSSKEPALAAMDSLSGTYIMRGCEQPLIVRFADPKRPR 279
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 94 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEGHGDVLEVALIRDRKTGEQQ---GCCFV 150
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 151 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 189
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 106 LFVGSVPRTANEDDVRPLFEGHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 165
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 166 HNQCTIPGAMGPVQVR 181
>gi|32482388|gb|AAP84383.1| FCA protein [Triticum aestivum]
Length = 710
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F+ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEYHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEYHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|32482069|gb|AAP84391.1| FCA protein [Triticum aestivum]
Length = 732
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VK FVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 115 VKFFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 174
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 175 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 234
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 235 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 290
>gi|327259665|ref|XP_003214656.1| PREDICTED: CUGBP Elav-like family member 1-like [Anolis
carolinensis]
Length = 514
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 425 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 484
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 485 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 223
>gi|32482102|gb|AAP84403.1| FCA protein [Triticum aestivum]
Length = 730
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++ +
Sbjct: 113 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERVIR 172
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 173 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 232
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 233 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 288
>gi|32482373|gb|AAP84379.1| FCA protein [Triticum aestivum]
Length = 737
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++ +
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERVIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
>gi|426233875|ref|XP_004010933.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 6
[Ovis aries]
Length = 451
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 121/195 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 14 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 74 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 133
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 134 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 193
Query: 191 RAQKAQSQANNLPNA 205
R Q+ Q P A
Sbjct: 194 RMQQMAGQLGAFPPA 208
>gi|32482104|gb|AAP84404.1| FCA protein [Triticum aestivum]
Length = 738
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 121 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 180
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+Y DGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 181 ALHNQCTIPGAMGPVQVRYTDGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 240
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 241 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 296
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 123 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 182
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 183 HNQCTIPGAMGPVQVR 198
>gi|34328409|ref|NP_780444.2| CUGBP Elav-like family member 6 [Mus musculus]
gi|81912009|sp|Q7TN33.1|CELF6_MOUSE RecName: Full=CUGBP Elav-like family member 6; Short=CELF-6;
AltName: Full=Bruno-like protein 6; AltName:
Full=CUG-BP- and ETR-3-like factor 6; AltName:
Full=RNA-binding protein BRUNOL-6
gi|30851561|gb|AAH52406.1| Bruno-like 6, RNA binding protein (Drosophila) [Mus musculus]
Length = 460
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|32482076|gb|AAP84394.1| FCA protein [Triticum aestivum]
Length = 734
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 117 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 176
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 177 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 236
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE LAA+ +++G + M G PL+V++AD ++ R
Sbjct: 237 VYIMKDGMRQSRGCGFVKFSSKEPPLAAMNSLSGTYIMRGCEQPLIVRFADLKRPR 292
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 119 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 178
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 179 HNQCTIPGAMGPVQVR 194
>gi|32482059|gb|AAP84387.1| FCA protein [Triticum aestivum]
Length = 728
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 111 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 170
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EH LF+ L K + E+ +F+ +G ++D
Sbjct: 171 ALHNQCTLPGAMGPVQVRYADGEKERHGSIEHILFVASLNKQATAKEIEEIFAPFGHVED 230
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 231 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 286
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 101 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 157
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 158 KYATSEEAERAIRALHNQCTLPGAMGPVQVRYADGEKER 196
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 113 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 172
Query: 404 MNGCQLGGKKLKVQLK 419
N C L G VQ++
Sbjct: 173 HNQCTLPGAMGPVQVR 188
>gi|32482110|gb|AAP84407.1| FCA protein [Triticum aestivum]
Length = 736
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE AL A+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALVAMNSLSGTYIMRGCEQPLIVQFADPKRPR 293
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 108 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 164
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 165 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 203
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|222142946|gb|ACI16484.2| flowering time control protein [Hordeum vulgare]
Length = 743
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 124 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 183
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 184 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 243
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++A+ ++ R
Sbjct: 244 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFANPKRPR 299
>gi|335292432|ref|XP_003356730.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 3 [Sus scrofa]
Length = 453
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|32482072|gb|AAP84392.1| FCA protein [Triticum aestivum]
Length = 736
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+Y DGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYVDGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I+R + S+GC +K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMRDGMRQSRGCGLVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 121 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 180
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 181 HNQCTIPGAMGPVQVR 196
>gi|431893701|gb|ELK03522.1| CUG-BP- and ETR-3-like factor 6 [Pteropus alecto]
Length = 505
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 119/188 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 14 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 74 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 133
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 134 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 193
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 194 RMQQMAGQ 201
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 416 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 475
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 476 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 505
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 20 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 79
>gi|8745539|gb|AAF78957.1|AF267535_1 CUG-binding protein LYLQ isoform [Mus musculus]
Length = 486
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 375 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 434
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|74140245|dbj|BAE33820.1| unnamed protein product [Mus musculus]
Length = 486
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 77/112 (68%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GA LFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 375 PTLYNQNLLTQQSIGAAGSQKEGPEGAYLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 434
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|395822451|ref|XP_003784531.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Otolemur
garnettii]
Length = 454
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|70794748|ref|NP_001020592.1| CUGBP Elav-like family member 1 [Rattus norvegicus]
gi|81918148|sp|Q4QQT3.1|CELF1_RAT RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|67678292|gb|AAH98012.1| CUG triplet repeat, RNA binding protein 1 [Rattus norvegicus]
Length = 487
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 376 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 435
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 436 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|12852385|dbj|BAB29392.1| unnamed protein product [Mus musculus]
gi|148695566|gb|EDL27513.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Mus
musculus]
Length = 487
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 376 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 435
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 436 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|38570084|ref|NP_941955.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|349585220|ref|NP_001231820.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|349732093|ref|NP_001231832.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|19857900|sp|P28659.2|CELF1_MOUSE RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=50 kDa nuclear polyadenylated RNA-binding
protein; AltName: Full=Brain protein F41; AltName:
Full=Bruno-like protein 2; AltName: Full=CUG triplet
repeat RNA-binding protein 1; Short=CUG-BP1; AltName:
Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=Deadenylation factor CUG-BP; AltName:
Full=Deadenylation factor EDEN-BP; AltName: Full=Embryo
deadenylation element-binding protein homolog;
Short=EDEN-BP homolog; AltName: Full=RNA-binding protein
BRUNOL-2
gi|12054715|emb|CAC20707.1| deadenylation factor EDEN-BP [Mus musculus]
Length = 486
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 375 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 434
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|149022603|gb|EDL79497.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 486
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 375 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 434
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|74150748|dbj|BAE25504.1| unnamed protein product [Mus musculus]
Length = 486
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 375 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 434
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG ++G K+LKVQLKR +KPY
Sbjct: 435 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFRIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|148695568|gb|EDL27515.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Mus
musculus]
gi|148695569|gb|EDL27516.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Mus
musculus]
Length = 499
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 27 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 86
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 87 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 146
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 147 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 206
Query: 189 ARR 191
+R
Sbjct: 207 QKR 209
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 388 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 447
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 448 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 499
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 107 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 165
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 166 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 210
>gi|410931355|ref|XP_003979061.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 378
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + +V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQIPRSWSEEQLRELFEPYGVVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS YG I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRLMFSPYGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 289 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 348
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 349 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 378
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + + M+ + + +
Sbjct: 179 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKR----MVQQLQQQMQQL 234
Query: 121 ALFSIYGTIKDLQIL 135
+ SI+G + L L
Sbjct: 235 SAASIWGNLTGLNSL 249
>gi|354469942|ref|XP_003497371.1| PREDICTED: CUGBP Elav-like family member 1-like [Cricetulus
griseus]
Length = 513
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 402 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 461
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|344247846|gb|EGW03950.1| CUG-BP- and ETR-3-like factor 1 [Cricetulus griseus]
Length = 514
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 403 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 462
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 463 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|38570086|ref|NP_059064.2| CUGBP Elav-like family member 1 isoform 1 [Mus musculus]
gi|148695567|gb|EDL27514.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Mus
musculus]
Length = 513
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 402 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 461
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|149022602|gb|EDL79496.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 513
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 402 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 461
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|326920382|ref|XP_003206453.1| PREDICTED: CUGBP Elav-like family member 1-like [Meleagris
gallopavo]
Length = 487
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSPFGQI 133
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 193
Query: 190 RR 191
+R
Sbjct: 194 KR 195
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 398 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 457
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 458 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 151
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 152 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 196
>gi|145306680|gb|ABP57104.1| CUG binding protein 1 [Gallus gallus]
Length = 487
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSPFGQI 133
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 193
Query: 190 RR 191
+R
Sbjct: 194 KR 195
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 398 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 457
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 458 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 151
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 152 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 196
>gi|18858491|ref|NP_571688.1| CUGBP Elav-like family member 1 [Danio rerio]
gi|82247731|sp|Q9IBD0.1|CELF1_DANRE RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=EDEN-BP/Bruno-like protein; AltName:
Full=RNA-binding protein BRUNOL-2
gi|7670538|dbj|BAA95119.1| brul [Danio rerio]
Length = 501
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLF+GM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMG 219
+R + Q NA S +L G +G
Sbjct: 194 QKRIAQQLQQQMQQLNAASMWGNLTGLNSLG 224
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 77/104 (74%)
Query: 325 VANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 384
++ N S + S GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SK
Sbjct: 398 LSQQNVSAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSK 457
Query: 385 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
CFGFVSY++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 458 CFGFVSYDNPVSSQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 501
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLFVG + K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|32482112|gb|AAP84408.1| FCA protein [Triticum aestivum]
Length = 741
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 123 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 182
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 183 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 242
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G P +V++AD ++ R
Sbjct: 243 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPSIVRFADPKRPR 298
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 113 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 169
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 170 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 208
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 125 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 184
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 185 HNQCTIPGAMGPVQVR 200
>gi|348545316|ref|XP_003460126.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 2
[Oreochromis niloticus]
Length = 485
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 139/226 (61%), Gaps = 6/226 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV SR+ A
Sbjct: 14 DAIKMFVGQIPRSWSEEQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYSRKSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGS 234
+R + Q +A S +L G +G P Y +Q++ +
Sbjct: 194 QKRMAQQLQQQMQQLSAASMWGNLTGLNSLG--PQYLALLHQSAST 237
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 77/104 (74%)
Query: 325 VANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 384
++ N S + S GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SK
Sbjct: 382 LSQQNVSAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSK 441
Query: 385 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
CFGFVSY++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 442 CFGFVSYDNPVSSQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRM 197
>gi|32482096|gb|AAP84401.1| FCA protein [Triticum aestivum]
Length = 735
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER + HKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIGHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|32482067|gb|AAP84390.1| FCA protein [Triticum aestivum]
Length = 735
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +E+KLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEYKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 179
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|71980775|ref|NP_492958.3| Protein UNC-75 [Caenorhabditis elegans]
gi|33469616|gb|AAQ19851.1| putative RNA-binding protein [Caenorhabditis elegans]
gi|38422759|emb|CAB03896.4| Protein UNC-75 [Caenorhabditis elegans]
Length = 514
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 129/215 (60%), Gaps = 13/215 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E I+KDK T +GC F+ R A +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRC 86
Query: 73 VNACHNKKTLPGASSPLQVKYADGE------LERLEHK-LFIGMLPKNVSEAEVSALFSI 125
H++KTLPG + +QVK AD + ++++ K LFIGML K SE EV ALF+
Sbjct: 87 QATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFAT 146
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G + ++ +LRG+ SKGCAF+KY+ A A+ A++G M G+S LVVK+ADTEK
Sbjct: 147 FGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHGSQTMPGASSSLVVKYADTEK 206
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGY 220
ERQ RR Q+ +Q L +P L + M Y
Sbjct: 207 ERQNRRMQQMAAQMGML------NPMLVNQVGMQY 235
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG ++SAKVFVD+AT SKCFGFVSY++ S+Q
Sbjct: 425 GPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQ 484
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +++PY
Sbjct: 485 AAITAMNGFQIGMKRLKVQLKRPRNESRPY 514
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K + KLF+G + K +E ++ A+F F +DEV +++ AS+GC FV +
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADG-ASKGCAFVKYKHGLD 176
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A++A H +T+PGASS L VKYAD E ER ++
Sbjct: 177 AHMAISALHGSQTMPGASSSLVVKYADTEKERQNRRM 213
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 326 ANSNPSTSSSG--GTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 383
A+S ST S+G P LF+ IP+ +++L + F+ FG++ + DK TG+
Sbjct: 10 ASSTSSTDSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMH 69
Query: 384 KCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 427
K F++Y SA A ++ + L G +Q+K + ++P
Sbjct: 70 KGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPADTDSRP 114
>gi|194217895|ref|XP_001492139.2| PREDICTED: CUGBP, Elav-like family member 1 isoform 1 [Equus
caballus]
gi|345783918|ref|XP_533186.3| PREDICTED: CUGBP, Elav-like family member 1 isoform 1 [Canis lupus
familiaris]
gi|410973721|ref|XP_003993296.1| PREDICTED: CUGBP Elav-like family member 1 isoform 3 [Felis catus]
Length = 482
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 371 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 430
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 431 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|148706789|gb|EDL38736.1| trinucleotide repeat containing 4, isoform CRA_b [Mus musculus]
Length = 467
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
Query: 21 QVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKK 80
Q+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +A H +K
Sbjct: 15 QIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQK 74
Query: 81 TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
TLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG
Sbjct: 75 TLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDG 133
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 134 TSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 191
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 378 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 437
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 438 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 467
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 97 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 153
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 154 NTLHSSRTLPGASSSLVVKFADTEKER 180
>gi|71164871|ref|NP_001020767.1| CUGBP Elav-like family member 1 isoform 3 [Homo sapiens]
gi|17374605|sp|Q92879.2|CELF1_HUMAN RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=50 kDa nuclear polyadenylated RNA-binding
protein; AltName: Full=Bruno-like protein 2; AltName:
Full=CUG triplet repeat RNA-binding protein 1;
Short=CUG-BP1; AltName: Full=CUG-BP- and ETR-3-like
factor 1; AltName: Full=Deadenylation factor CUG-BP;
AltName: Full=Embryo deadenylation element-binding
protein homolog; Short=EDEN-BP homolog; AltName:
Full=RNA-binding protein BRUNOL-2
gi|8745535|gb|AAF78955.1|AF267533_1 CUG-binding protein LYLQ isoform [Homo sapiens]
gi|9246973|gb|AAF86230.1|AF248648_1 RNA-binding protein BRUNOL2 [Homo sapiens]
gi|12053580|emb|CAC20566.1| deadenylation factor CUG-BP [Homo sapiens]
gi|119588315|gb|EAW67909.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Homo
sapiens]
gi|119588318|gb|EAW67912.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Homo
sapiens]
gi|387539216|gb|AFJ70235.1| CUGBP Elav-like family member 1 isoform 3 [Macaca mulatta]
Length = 486
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 375 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 434
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|119588312|gb|EAW67906.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Homo
sapiens]
Length = 487
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 376 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 435
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 436 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|5729794|ref|NP_006551.1| CUGBP Elav-like family member 1 isoform 1 [Homo sapiens]
gi|402893570|ref|XP_003909965.1| PREDICTED: CUGBP Elav-like family member 1 isoform 3 [Papio anubis]
gi|1518802|gb|AAC50895.1| CUG-BP/hNab50 [Homo sapiens]
gi|119588313|gb|EAW67907.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Homo
sapiens]
gi|380783235|gb|AFE63493.1| CUGBP Elav-like family member 1 isoform 1 [Macaca mulatta]
gi|410222890|gb|JAA08664.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 482
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 371 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 430
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 431 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|395815679|ref|XP_003781352.1| PREDICTED: CUGBP Elav-like family member 1 [Otolemur garnettii]
Length = 482
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 371 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 430
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 431 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|338712050|ref|XP_003362651.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 3 [Equus
caballus]
gi|410973719|ref|XP_003993295.1| PREDICTED: CUGBP Elav-like family member 1 isoform 2 [Felis catus]
Length = 486
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 375 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 434
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|281340493|gb|EFB16077.1| hypothetical protein PANDA_010600 [Ailuropoda melanoleuca]
Length = 486
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 375 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 434
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 435 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|426245410|ref|XP_004016504.1| PREDICTED: CUGBP Elav-like family member 1 [Ovis aries]
Length = 486
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 397 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 456
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 457 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|155372145|ref|NP_001094682.1| CUGBP Elav-like family member 1 [Bos taurus]
gi|154425935|gb|AAI51434.1| CUGBP1 protein [Bos taurus]
gi|296479665|tpg|DAA21780.1| TPA: CUG triplet repeat, RNA-binding protein 1 [Bos taurus]
Length = 486
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 397 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 456
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 457 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|432090407|gb|ELK23833.1| CUGBP Elav-like family member 1 [Myotis davidii]
Length = 513
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKSNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 402 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 461
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKSNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|431915767|gb|ELK16100.1| CUG-BP- and ETR-3-like factor 1 [Pteropus alecto]
Length = 513
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 402 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 461
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|383415257|gb|AFH30842.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384939406|gb|AFI33308.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384944856|gb|AFI36033.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|410222888|gb|JAA08663.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410259328|gb|JAA17630.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410259330|gb|JAA17631.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298512|gb|JAA27856.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298514|gb|JAA27857.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357300|gb|JAA44561.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357302|gb|JAA44562.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357304|gb|JAA44563.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 513
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 402 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 461
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|348558646|ref|XP_003465128.1| PREDICTED: CUGBP Elav-like family member 1-like [Cavia porcellus]
Length = 513
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 402 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 461
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|119588314|gb|EAW67908.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Homo
sapiens]
gi|355566554|gb|EHH22933.1| hypothetical protein EGK_06290 [Macaca mulatta]
gi|355752163|gb|EHH56283.1| hypothetical protein EGM_05659 [Macaca fascicularis]
Length = 514
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 403 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 462
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 463 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 514
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|441646598|ref|XP_004090758.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|383415255|gb|AFH30841.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384939404|gb|AFI33307.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|387540328|gb|AFJ70791.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|410259332|gb|JAA17632.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298516|gb|JAA27858.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357404|gb|JAA44564.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 509
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 398 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 457
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 458 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 509
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|281203518|gb|EFA77718.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 341
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 149/270 (55%), Gaps = 16/270 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
K+FVG +P E +L +F++F + ++IIKDK T +GC F+ +++EAD A+N
Sbjct: 14 KVFVGHIPLSFKEEELSGIFEKFGNILNISIIKDKRTNVPKGCAFISFSTKEEADLAINT 73
Query: 76 CHNKKTLPG-ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
++ G + PLQVKY+D E+E++E KLFIGML + E V+++F YG I++L I
Sbjct: 74 VNSSNQFLGDVTKPLQVKYSDNEIEKMERKLFIGMLG-SADEDTVTSVFGKYGAIEELTI 132
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+R + KG F+K+ +E+A A+ ++GKH GSS+PL+VK+ADTE++++ ++
Sbjct: 133 VREKEGRPKGYGFIKFSAREEAEDAIRELDGKHTFAGSSIPLIVKFADTERQKRKKQLMN 192
Query: 195 AQSQANNLP----NADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
Q+Q N N Q P+ PM Y N + +Q + + P + QP
Sbjct: 193 TQTQPQNTWGGGGNNFYQQPNQ-QQFPM-YYDNMNMHQHQVNNN--------PFQRYQPR 242
Query: 251 FHGIIPPVNQGNAMRGASPDLSSNMGPRNY 280
+ Q N + S DL P+NY
Sbjct: 243 STNVYQMNQQYNEFQQESSDLFIYYLPQNY 272
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 163/335 (48%), Gaps = 26/335 (7%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEA 162
K+F+G +P + E E+S +F +G I ++ I++ + KGCAF+ + TKE+A A+
Sbjct: 14 KVFVGHIPLSFKEEELSGIFEKFGNILNISIIKDKRTNVPKGCAFISFSTKEEADLAINT 73
Query: 163 INGKHKMEGS-SVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQH-PSLFG------ 214
+N ++ G + PL VK++D E E+ R+ L +AD S+FG
Sbjct: 74 VNSSNQFLGDVTKPLQVKYSDNEIEKMERKLFIGM-----LGSADEDTVTSVFGKYGAIE 128
Query: 215 --ALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHG----IIPPVNQGNAMRGAS 268
+ GYG+ + + + + + F G +I +
Sbjct: 129 ELTIVREKEGRPKGYGFIKFSAREEAEDAIRELDGKHTFAGSSIPLIVKFADTERQKRKK 188
Query: 269 PDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ-YPMPYPGGMLGHRPLNNSP-GSVSPAVA 326
+++ P+N G G+ + P Q +PM Y + +NN+P P
Sbjct: 189 QLMNTQTQPQN----TWGGGGNNFYQQPNQQQFPMYYDNMNMHQHQVNNNPFQRYQPRST 244
Query: 327 NSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 386
N ++LFIY++PQ +GD EL FQ +G V+SAKVF+DKAT SKCF
Sbjct: 245 NVYQMNQQYNEFQQESSDLFIYYLPQNYGDLELKMLFQTYGNVISAKVFIDKATNQSKCF 304
Query: 387 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 421
GFV+Y++P SA NAI +NG + GKKLKV K++
Sbjct: 305 GFVTYDNPQSALNAINDLNGFAIEGKKLKVNFKKE 339
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G +F+ HIP F ++EL F+ FG +L+ + DK T V K F+S+ + A AI
Sbjct: 12 GFKVFVGHIPLSFKEEELSGIFEKFGNILNISIIKDKRTNVPKGCAFISFSTKEEADLAI 71
Query: 402 AMMN 405
+N
Sbjct: 72 NTVN 75
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 83 PGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI-LRGSQQT 141
P +++ Q+ E ++ LFI LP+N + E+ LF YG + ++ + +
Sbjct: 241 PRSTNVYQMNQQYNEFQQESSDLFIYYLPQNYGDLELKMLFQTYGNVISAKVFIDKATNQ 300
Query: 142 SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
SK F+ Y+ + AL A+ +NG +EG + + K
Sbjct: 301 SKCFGFVTYDNPQSALNAINDLNG-FAIEGKKLKVNFK 337
>gi|410930632|ref|XP_003978702.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 376
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 123/183 (67%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + +V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEEQLRELFEPYGVVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + + M+ + + +
Sbjct: 153 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKR----MVQQLQQQMQQL 208
Query: 121 ALFSIYGTIKDLQIL 135
+ SI+G + L L
Sbjct: 209 SAASIWGNLTGLNSL 223
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 32/43 (74%)
Query: 386 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
GFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 334 LGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 376
>gi|281211191|gb|EFA85357.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 515
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEF-ALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
+KLFVGQ+PK E L +MF ++ + E+++I++K T +GC FV S+ +A+KA+
Sbjct: 3 IKLFVGQIPKSFNEDNLKSMFADYEGSIQEISVIRNKQTNEPQGCAFVTLSSKDDAEKAI 62
Query: 74 NACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
H+ K PG S+ LQVKYAD E E+ KLF+GMLP+ E ++ LF+ YG ++D+
Sbjct: 63 QTLHSSKKFPGVSNSLQVKYADSEQEKQSTKLFVGMLPRTYQEDDIKTLFADYGEVEDIC 122
Query: 134 ILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+LRG+ SKGC F++++ +E L+A+ A+NG + + S LVVK+ADTE
Sbjct: 123 LLRGNNNESKGCGFIRFQNRESCLSAISALNGIN-LPPSPNNLVVKFADTE 172
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 54/72 (75%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G+NLF+Y+IP + D ++ N F +G V+S+KV+ DK+TG+SK FGFVSY++ +A
Sbjct: 370 SGPAGSNLFVYNIPNYYNDSDMFNLFSPYGHVVSSKVYTDKSTGLSKGFGFVSYDNSIAA 429
Query: 398 QNAIAMMNGCQL 409
+AIA +NG +
Sbjct: 430 NSAIANLNGTTM 441
>gi|308465068|ref|XP_003094796.1| CRE-UNC-75 protein [Caenorhabditis remanei]
gi|308246879|gb|EFO90831.1| CRE-UNC-75 protein [Caenorhabditis remanei]
Length = 491
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 121/197 (61%), Gaps = 7/197 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E I+KDK T +GC F+ R A +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTFCHRDSAQRC 86
Query: 73 VNACHNKKTLPGASSPLQVKYADGEL-------ERLEHKLFIGMLPKNVSEAEVSALFSI 125
H++KTLPG + +QVK AD + + + KLFIGML K SE +V LF+
Sbjct: 87 QTTLHDQKTLPGMNRAMQVKPADTDSRPASPKDKADDKKLFIGMLSKQQSEDDVRTLFAA 146
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G + ++ +LRG+ SKGCAF+KY++ A A+ A++G M G+S LVVK+ADTEK
Sbjct: 147 FGELDEVTVLRGADGASKGCAFVKYKSGFDAHMAISALHGSQTMPGASSSLVVKYADTEK 206
Query: 186 ERQARRAQKAQSQANNL 202
ERQ RR Q+ +Q L
Sbjct: 207 ERQNRRMQQMAAQMGML 223
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVSY++ S+Q
Sbjct: 402 GPDGCNLFIYHLPQEFGDAELIQMFAPFGHVVSAKVFVDRATNQSKCFGFVSYDNIHSSQ 461
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AIA MNG Q+G K+LKVQLKR + +PY
Sbjct: 462 AAIAAMNGFQIGMKRLKVQLKRPRESARPY 491
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K + KLF+G + K +E + +F F +DEV +++ AS+GC FV S +
Sbjct: 118 KDKADDKKLFIGMLSKQQSEDDVRTLFAAFGELDEVTVLRG-ADGASKGCAFVKYKSGFD 176
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A++A H +T+PGASS L VKYAD E ER ++
Sbjct: 177 AHMAISALHGSQTMPGASSSLVVKYADTEKERQNRRM 213
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 326 ANSNPSTSSSGG--TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 383
A+S ST S+G P LF+ IP+ +++L + F+ FG++ + DK TG+
Sbjct: 10 ASSTSSTDSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMH 69
Query: 384 KCFGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 427
K F+++ SAQ ++ + L G +Q+K + ++P
Sbjct: 70 KGCAFLTFCHRDSAQRCQTTLHDQKTLPGMNRAMQVKPADTDSRP 114
>gi|32482085|gb|AAP84397.1| FCA protein [Triticum aestivum]
Length = 740
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 123 AKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYTTSEEAERAIR 182
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 183 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 242
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V +AD ++ R
Sbjct: 243 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVLFADPKRPR 298
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 343 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI- 401
A LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI
Sbjct: 123 AKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYTTSEEAERAIR 182
Query: 402 AMMNGCQLGGKKLKVQLK 419
A+ N C + G VQ++
Sbjct: 183 ALHNQCTIPGAMGPVQVR 200
>gi|324507732|gb|ADY43273.1| CUGBP Elav family member 1-A [Ascaris suum]
gi|324510717|gb|ADY44479.1| CUGBP Elav family member 1-A, partial [Ascaris suum]
Length = 594
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 119/179 (66%), Gaps = 1/179 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E + +F++F V ++N+++DKTT+ASRGCCFV R +A A
Sbjct: 35 DTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTFYRRADAIAA 94
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E +V A+F+ +G I+D
Sbjct: 95 QAALHNIRVLPQMHHPVQMKPADSE-NRNERKLFVGMLNKRLTEEDVKAMFAHFGHIEDC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+L+ S S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE++A++
Sbjct: 154 TVLKDSDGKSRGCAFVTFANRSYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEKEAKK 212
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 92/149 (61%), Gaps = 5/149 (3%)
Query: 281 AMPPSGFVGSGYPAVPGLQYPMPYPG-GMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTG 339
A PPS + + QY +P G + L N+ +P ++ +TS G
Sbjct: 433 AAPPSNYDALQHAYAGIHQYAAAFPQLATNGQQMLVNA---ATPTMSVVTSTTSGGQSKG 489
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P G NLFIYH+PQ+F D +L F FG +LSAKVF+DK T +SKCFGFVSY++ SAQN
Sbjct: 490 PDGCNLFIYHLPQDFADSDLVTTFSPFGNILSAKVFIDKQTNLSKCFGFVSYDNAVSAQN 549
Query: 400 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AIA +NG Q+G K+LKVQLKR K +KPY
Sbjct: 550 AIAALNGFQIGSKRLKVQLKR-GKDSKPY 577
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +TE + AMF F +++ ++KD + SRGC FV +R
Sbjct: 117 DSENRNER-KLFVGMLNKRLTEEDVKAMFAHFGHIEDCTVLKDSDGK-SRGCAFVTFANR 174
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
A +A+ H+ +T+ G S+P+ VK+AD + E+ E K +G
Sbjct: 175 SYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEK-EAKKTVG 215
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G + A +N ST+ P +F+ IP+ +G+QE F+ FG V V DK
Sbjct: 15 GKLDEQSAQTNASTARE--PDPDTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDK 72
Query: 379 ATGVSKCFGFVSY 391
T S+ FV++
Sbjct: 73 TTQASRGCCFVTF 85
>gi|348576693|ref|XP_003474121.1| PREDICTED: CUGBP Elav-like family member 4-like [Cavia porcellus]
Length = 477
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ C +
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLYCTRHSASV 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTI 129
H +LPG + P+QVK AD E + KLF+GML K SE +V LF +G I
Sbjct: 110 TTQVLLHGAPSLPGMNRPIQVKPADSESRGGKDRKLFVGMLNKQQSEDDVRRLFEAFGNI 169
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER
Sbjct: 170 EECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTM 229
Query: 190 RRAQKAQSQ 198
RR Q+ Q
Sbjct: 230 RRMQQMAGQ 238
>gi|268561214|ref|XP_002646391.1| C. briggsae CBR-UNC-75 protein [Caenorhabditis briggsae]
Length = 550
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 123/197 (62%), Gaps = 7/197 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E I+KDK T +GC F+ R A +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTFCHRDSAQRC 86
Query: 73 VNACHNKKTLPGASSPLQVKYADGE------LERLEHK-LFIGMLPKNVSEAEVSALFSI 125
H++KTLPG + +QVK AD + ++++ K LFIGML K SE +V LF+
Sbjct: 87 QTTLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDDVRTLFAA 146
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G + ++ +LRG+ SKGCAF+KY++ A A+ A++G M G+S LVVK+ADTEK
Sbjct: 147 FGELDEVTVLRGADGASKGCAFVKYKSGFDAHMAISALHGSQTMPGASSSLVVKYADTEK 206
Query: 186 ERQARRAQKAQSQANNL 202
ERQ RR Q+ +Q L
Sbjct: 207 ERQNRRMQQMAAQMGML 223
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVSY++ S+Q
Sbjct: 461 GPDGCNLFIYHLPQEFGDAELIQMFAPFGHVVSAKVFVDRATNQSKCFGFVSYDNIHSSQ 520
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AIA MNG Q+G K+LKVQLKR + ++PY
Sbjct: 521 AAIAAMNGFQIGMKRLKVQLKRPREASRPY 550
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K + KLF+G + K +E + +F F +DEV +++ AS+GC FV S +
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDDVRTLFAAFGELDEVTVLRG-ADGASKGCAFVKYKSGFD 176
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A++A H +T+PGASS L VKYAD E ER ++
Sbjct: 177 AHMAISALHGSQTMPGASSSLVVKYADTEKERQNRRM 213
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 331 STSSSGGTGPP-----GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 385
STSS+ G P LF+ IP+ +++L + F+ FG++ + DK TG+ K
Sbjct: 12 STSSTDSNGFPVKDADAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKG 71
Query: 386 FGFVSYESPASAQNAIAMMNGCQ-LGGKKLKVQLKRDNKQNKP 427
F+++ SAQ ++ + L G +Q+K + ++P
Sbjct: 72 CAFLTFCHRDSAQRCQTTLHDQKTLPGMNRAMQVKPADTDSRP 114
>gi|194385764|dbj|BAG65257.1| unnamed protein product [Homo sapiens]
Length = 468
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 119/178 (66%), Gaps = 3/178 (1%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKAVN 74
+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A N
Sbjct: 1 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 60
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
A HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I++ +
Sbjct: 61 ALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECR 120
Query: 134 ILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 121 ILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 178
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 357 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 416
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 417 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 468
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 77 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 134
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 135 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 179
>gi|417411512|gb|JAA52190.1| Putative rna-binding protein etr-3 rrm superfamily, partial
[Desmodus rotundus]
Length = 541
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 69 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 128
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 129 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 188
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 189 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 248
Query: 189 ARR 191
+R
Sbjct: 249 QKR 251
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 430 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 489
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 490 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 541
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 149 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 207
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 208 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 252
>gi|149632715|ref|XP_001509363.1| PREDICTED: CUGBP Elav-like family member 1 [Ornithorhynchus
anatinus]
Length = 513
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRSMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 424 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 483
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRSMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 224
>gi|32482130|gb|AAP84415.1| FCA protein, partial [Triticum aestivum]
Length = 743
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 126 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 185
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 186 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIGEIFAPFGHVED 245
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+G F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 246 VYIMKDGMRQSRGSGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 301
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 128 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 187
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 188 HNQCTIPGAMGPVQVR 203
>gi|355677605|gb|AER96037.1| CUG triplet repeat, RNA binding protein 1 [Mustela putorius furo]
Length = 540
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 69 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 128
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 129 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 188
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 189 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 248
Query: 189 ARR 191
+R
Sbjct: 249 QKR 251
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 77/111 (69%), Gaps = 6/111 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 430 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 489
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 427
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KP
Sbjct: 490 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKP 540
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 149 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 207
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 208 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 252
>gi|355692855|gb|EHH27458.1| CUGBP Elav-like family member 6, partial [Macaca mulatta]
Length = 389
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 31 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 90
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 91 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 150
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 151 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 210
Query: 191 RAQK 194
R Q+
Sbjct: 211 RMQQ 214
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 300 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 359
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 360 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 389
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 37 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 96
>gi|32482118|gb|AAP84411.1| FCA protein, partial [Triticum aestivum]
Length = 736
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+ + T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRGRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 AQHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGAYIMRGCEQPLIVRFADPKRPR 295
>gi|395543757|ref|XP_003773780.1| PREDICTED: CUGBP Elav-like family member 1 [Sarcophilus harrisii]
Length = 513
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 402 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 461
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 224
>gi|32482369|gb|AAP84377.1| FCA protein [Triticum aestivum]
Length = 727
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +G CFV + +EA++A+
Sbjct: 114 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGRCFVKYATSEEAERAIR 173
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 174 ALHNQCTIPGAMGPVQVRYADGERERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 233
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 234 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 289
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 116 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGRCFVKYATSEEAERAIRAL 175
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 176 HNQCTIPGAMGPVQVR 191
>gi|410977611|ref|XP_003995197.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 4
[Felis catus]
Length = 482
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 117/189 (61%), Gaps = 1/189 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC + +R A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCALLSFCARDAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTI 129
K+ A H ++ LP + P+QVK AD E + KLF+GML K SE +V LF +G I
Sbjct: 110 KSQTALHRQEVLPXMNRPIQVKPADSESRGGKDRKLFVGMLNKQQSEDDVRRLFEAFGNI 169
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER
Sbjct: 170 EECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTM 229
Query: 190 RRAQKAQSQ 198
RR Q+ Q
Sbjct: 230 RRMQQMAGQ 238
>gi|387916084|gb|AFK11651.1| CUGBP Elav-like family member 2 isoform 2 [Callorhinchus milii]
Length = 513
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 141/229 (61%), Gaps = 5/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ TE +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 44 DAIKMFVGQIPRSWTEKELKELFEPYGAVHQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 103
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 104 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 163
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 164 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 223
Query: 189 ARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAPPYNGYGYQASGSYG 236
RR Q+ +Q N+ + + + GAL Y +G + SG G
Sbjct: 224 QRRLQQQLAQQMQQLNSATWGNLTGLGALGPQYLAVSGQWGTKTSGEMG 272
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 416 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 475
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 476 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 124 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 182
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 183 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 222
>gi|32482367|gb|AAP84376.1| FCA protein [Triticum aestivum]
Length = 735
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GC FV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCRFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 120 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCRFVKYATSEEAERAIRAL 179
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 180 HNQCTIPGAMGPVQVR 195
>gi|340502339|gb|EGR29040.1| RNA binding protein, putative [Ichthyophthirius multifiliis]
Length = 316
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 171/360 (47%), Gaps = 67/360 (18%)
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSA 121
+A++A+ NK +LPG + +++K+AD E ERL +HKLF+G LPK +E +
Sbjct: 3 DAERAIADLKNK-SLPGMKNNIEIKWADNEEERLGVNQDSDHKLFVGSLPKTCTEQNIRD 61
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
+F +G I++L +++ SQ ++ AFLKY+ KE+A A+ +N + + S P+ V++A
Sbjct: 62 IFETFGEIEELHLMKDSQNNTRQ-AFLKYKLKEKAHLAIRNLNSQVYIGNSENPIEVRFA 120
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
E + ++ Q QAN +P S+ + ++
Sbjct: 121 KKYVESEHQKVQHKTEQAN---------------IPFV--------------SWQKIYFK 151
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYP 301
NQP ++ P NQ R ++ L ++ S Y + Q
Sbjct: 152 YYTENNQPYYYH--PYTNQSTYERPSTGSLIHDVDG-----------SSEYIELNSKQLL 198
Query: 302 MPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGN 361
MP P V N GPPG+NLFI+H+P +F D +L
Sbjct: 199 MP----------------KNEPFVINDRKDVYDGKKHGPPGSNLFIFHLPTDFRDSDLER 242
Query: 362 AFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 421
F FG V+SA+V + G SK FGF+SY S A++AI +NG QL K+LKV++K++
Sbjct: 243 MFSQFGEVISARVNT-RPDGTSKGFGFISYNSAKEAEDAIRNLNGVQLKNKRLKVEIKKE 301
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK TE + +F+ F ++E++++KD + F+ +++A A+
Sbjct: 44 KLFVGSLPKTCTEQNIRDIFETFGEIEELHLMKDSQNNTRQ--AFLKYKLKEKAHLAIRN 101
Query: 76 CHNKKTLPGASSPLQV----KYADGELERLEHK 104
+++ + + +P++V KY + E ++++HK
Sbjct: 102 LNSQVYIGNSENPIEVRFAKKYVESEHQKVQHK 134
>gi|403296214|ref|XP_003939012.1| PREDICTED: CUGBP Elav-like family member 5 [Saimiri boliviensis
boliviensis]
Length = 363
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 182/392 (46%), Gaps = 60/392 (15%)
Query: 56 RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 13 HGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQS 72
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 73 EEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 132
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSY 235
LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y +
Sbjct: 133 LVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY------AQ 175
Query: 236 GLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GY 292
LMQ + + + + P V +S N P P SG G
Sbjct: 176 ALMQQQTTVLSTSGSY--LSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGT 233
Query: 293 PAVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSSG 336
AVPGL P+ P+PG GH L + G V SP VA + +P+ S
Sbjct: 234 TAVPGLVTPITNGFAGVVPFPG---GHPALETVYANGLVPYPAQSPTVAETLHPAFS--- 287
Query: 337 GTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 396
G + P A + + + GFVS+++PAS
Sbjct: 288 -----GVQQYTAMYPTA-----------AITPIAHSVPQPPPLLQQQQREGFVSFDNPAS 331
Query: 397 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 332 AQTAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 363
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 61 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 119
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 120 LHGSQTMPGASSSLVVKFADTDKERTLRRM 149
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 136 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
RG+Q GCAFL Y ++ A+ A A++ + + G + P+ VK AD+E R+
Sbjct: 6 RGAQWLVHGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRK 61
>gi|37588904|gb|AAH04145.2| TNRC4 protein, partial [Homo sapiens]
Length = 291
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
Query: 21 QVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKK 80
Q+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +A H +K
Sbjct: 5 QIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQK 64
Query: 81 TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
TLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG
Sbjct: 65 TLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDG 123
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 124 TSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 181
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 87 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 143
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 NTLHSSRTLPGASSSLVVKFADTEKER 170
>gi|82237387|sp|Q6P0B1.1|CELF2_DANRE RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|41351000|gb|AAH65686.1| Cugbp2 protein [Danio rerio]
Length = 514
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 42 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 102 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 161
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 162 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 221
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 222 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL 268
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 476
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|32482392|gb|AAP84385.1| FCA protein [Triticum aestivum]
Length = 738
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFVGSVPRTANEDDARPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
HN+ T+PGA P+QV+YADGE ER +EHKLF+ L + + E+ +F+ +G ++D
Sbjct: 182 TLHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNRQATAKEIEEIFAPFGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMGGCEQPLIVRFADPKRLR 297
>gi|294946457|ref|XP_002785076.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
gi|239898488|gb|EER16872.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
Length = 430
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 202/428 (47%), Gaps = 60/428 (14%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRAS---RGCCFVICPSRQEADK 71
VKLFVG++P E ++ ++F + V+EV+II+ KT GC FV + QEA
Sbjct: 8 VKLFVGKLPCDWDEEEVRSLFGPYGDVEEVSIIRPKTNPGKGQKYGCAFVKYGAIQEAAA 67
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSAL 122
A+ K+T+ + PLQ++YA+GE ERL KLF+ +P +V +AE+ +
Sbjct: 68 AIQGMAGKQTVNENAGPLQIQYANGEPERLGLADDTEGVAQKLFVANVPADVDDAELKRV 127
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
FS YGT+ + ++ + AF+++ K L A++A+N K + P+ VK A+
Sbjct: 128 FSQYGTVTEAYCIQPRRPGGNRAAFVRFSKKSDGLRAIDALNEKFTFPNNDRPVAVKCAE 187
Query: 183 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRL 242
T ++R A R Q ++P + Q PS + GY P G ++G YG +
Sbjct: 188 TREQRDAHR------QDMDVPRSQQQQPSNRFSNDSGYGP-----GPTSTGGYGQRITPV 236
Query: 243 PPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPM 302
P QP G + LS + G Y +G Q+ +
Sbjct: 237 PTAAAQPRQAG------------DWTEYLSQSDGRYYYHNSRTG----------QTQWDV 274
Query: 303 PYPGGMLGHRPLNNSPGSVSPAVANS---------NPSTSSSGGTGPPGANLFIYHIPQE 353
PY +G P +V P +S P + GP GAN+F+Y+IP E
Sbjct: 275 PYEFQSMGP-----PPTAVPPQQDHSYGGGYGLMQTPRSQQQRRDGPMGANVFVYNIPPE 329
Query: 354 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG-CQLGGK 412
+ D +L F + G + + +V +D T SK +GFVS+ SA A+ M+G G+
Sbjct: 330 WTDNDLVREFGSCGPLSTTRVIIDSQTNQSKGYGFVSFREVRSAMKAVETMDGFLTSTGR 389
Query: 413 KLKVQLKR 420
+LKVQ+K+
Sbjct: 390 RLKVQIKK 397
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK----GCAFLKYETKEQ 155
R+ KLF+G LP + E EV +LF YG ++++ I+R K GCAF+KY ++
Sbjct: 5 RIPVKLFVGKLPCDWDEEEVRSLFGPYGDVEEVSIIRPKTNPGKGQKYGCAFVKYGAIQE 64
Query: 156 ALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
A AA++ + GK + ++ PL +++A+ E ER
Sbjct: 65 AAAAIQGMAGKQTVNENAGPLQIQYANGEPER 96
>gi|351708216|gb|EHB11135.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 513
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 122/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKG-CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
++ +ILRG S+G CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 402 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFVPFGNVVSAKVFI 461
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ + GC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|152013389|sp|Q5F3T7.2|CELF1_CHICK RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
Length = 489
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 400 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 459
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 460 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 489
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|35903017|ref|NP_919382.1| CUGBP Elav-like family member 2 [Danio rerio]
gi|19909954|dbj|BAB87828.1| elav-type ribonucleoprotein-3 [Danio rerio]
Length = 486
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 194 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL 240
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 389 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 448
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 449 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 486
>gi|32482385|gb|AAP84382.1| FCA protein [Triticum aestivum]
Length = 700
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG P+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 105 VKLFVGSAPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 164
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+ ADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 165 ALHNQCTIPGAMGPVQVRCADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 224
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 225 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 280
>gi|380807355|gb|AFE75553.1| CUGBP Elav-like family member 6 isoform 1, partial [Macaca mulatta]
Length = 226
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 116/180 (64%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A KA +
Sbjct: 45 IKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQS 104
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I++ +
Sbjct: 105 ALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTV 164
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+
Sbjct: 165 LRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQ 224
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 344 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNA 400
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A
Sbjct: 46 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 105
Query: 401 I 401
+
Sbjct: 106 L 106
>gi|449274607|gb|EMC83685.1| CUG-BP- and ETR-3-like factor 1 [Columba livia]
Length = 515
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKSNAVEDRKLFIGMISKKCNENDIRVMFSPFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 426 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 485
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 486 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 515
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKSNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 224
>gi|148224750|ref|NP_001079970.1| CUGBP Elav-like family member 1-B [Xenopus laevis]
gi|47123025|gb|AAH70706.1| Cugbp1-b protein [Xenopus laevis]
Length = 529
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 133/219 (60%), Gaps = 17/219 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E +L +F+++ V E+N+++D++ S+GCCF+ +R+ A
Sbjct: 41 DSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGE-----LERL---EH-------KLFIGMLPKNVS 115
+A NA HN K LPG P+Q+K AD E L + EH KLFIGM+ K +
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNGGLNTVLFPEHPASVEDRKLFIGMVSKKCN 160
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E ++ LFS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P
Sbjct: 161 ENDIRTLFSQFGQIEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSP 220
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFG 214
+VVK+ADT+K+++ +R + Q NA S +L G
Sbjct: 221 IVVKFADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLAG 259
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGF+SY++P SAQ
Sbjct: 440 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQTNLSKCFGFISYDNPVSAQ 499
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 500 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 529
>gi|119588316|gb|EAW67910.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_e [Homo
sapiens]
Length = 283
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|294884849|gb|ADF47435.1| bruno-like protein [Dugesia japonica]
Length = 372
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 177/367 (48%), Gaps = 63/367 (17%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLFIGML KN SE +V L YG IK+ IL+ + + CAF+ + + ++A A+EA+
Sbjct: 11 KLFIGMLNKNQSEDDVRQLCEPYGCIKNCMILKDA--YGQSCAFVTFNSSDEANIAIEAL 68
Query: 164 NG-KHKME----GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPM 218
NG K M GS++ V + AD ++ERQ R+ Q +P P G
Sbjct: 69 NGLKTSMACPELGSTI--VARLADNDQERQLRKMQMQ------IPAVQFLTPQNVGYYNQ 120
Query: 219 GYAP------PY--NGYGYQASGSYGLMQYR-------LPPMQN-------QPGF----- 251
G P P+ + +Y LM + PP+ N QP
Sbjct: 121 GIVPMILQQFPHATDQQTTNIINAYALMHFNQMYSPNLTPPIMNSSPSVTPQPQIGVPMS 180
Query: 252 -------------HGIIPPVNQG----NAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPA 294
H +IP ++ N+ +P L N+ N++ P + + S Y
Sbjct: 181 ASNDISSNQCSINHYVIPAISNETLSPNSYINPNPQLI-NIANINFS-PEALHLSSLYSM 238
Query: 295 VPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPS-TSSSGGTGPPGANLFIYHIPQE 353
P + + P G+ N P ++S + S TGP G NLFIYH+PQ+
Sbjct: 239 FPQCGFNINQPLGLSSQNVYQN-PATLSLQFQQTQKDGMKDSIVTGPEGCNLFIYHLPQD 297
Query: 354 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 413
FGD L F FG V+SAKV++D+AT SKCFGFVS+++ +SA+ AI MNG Q+G K+
Sbjct: 298 FGDTALAQLFAPFGNVISAKVYLDRATNQSKCFGFVSFDNASSAEGAIRGMNGFQIGTKR 357
Query: 414 LKVQLKR 420
LKVQLKR
Sbjct: 358 LKVQLKR 364
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
++ +E KLF+G + K+ +E + + + + + I+KD + C FV S E
Sbjct: 4 QNQDENAKLFIGMLNKNQSEDDVRQLCEPYGCIKNCMILKDA---YGQSCAFVTFNSSDE 60
Query: 69 ADKAVNACHNKKT---LPGASSPLQVKYADGELERLEHKL 105
A+ A+ A + KT P S + + AD + ER K+
Sbjct: 61 ANIAIEALNGLKTSMACPELGSTIVARLADNDQERQLRKM 100
>gi|32482127|gb|AAP84414.1| FCA protein [Triticum aestivum]
Length = 740
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 119/187 (63%), Gaps = 5/187 (2%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
S + KSS VKL VG VP+ E + +F++ V EV +I+D+ T +GCCFV
Sbjct: 115 SDHDNKSS--YVKLIVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKY 172
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVS 120
+ +E + A+ A HN+ T+PGA P+QV+Y DGE ER +EHKLF+ L K + E+
Sbjct: 173 ATSEETESAIRALHNQCTIPGAMGPVQVRYTDGEKERHGSIEHKLFVASLNKQATAKEIE 232
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+F+ +G ++D+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++
Sbjct: 233 EIFAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRF 292
Query: 181 ADTEKER 187
AD ++ R
Sbjct: 293 ADPKRPR 299
>gi|440911412|gb|ELR61086.1| CUGBP Elav-like family member 4 [Bos grunniens mutus]
Length = 487
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 11/199 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACH-NKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEV 119
KA +A H ++K L G + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHADEKHLGGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDV 169
Query: 120 SALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK
Sbjct: 170 RRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVK 229
Query: 180 WADTEKERQARRAQKAQSQ 198
+ADT+KER RR Q+ Q
Sbjct: 230 FADTDKERTMRRMQQMAGQ 248
>gi|410908161|ref|XP_003967559.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 6 [Takifugu
rubripes]
Length = 538
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 72/92 (78%)
Query: 337 GTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 396
G GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY++P S
Sbjct: 447 GVGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYDNPVS 506
Query: 397 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 507 AQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 538
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|410908151|ref|XP_003967554.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Takifugu
rubripes]
Length = 530
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVS
Sbjct: 433 SVAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVS 492
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 493 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 530
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|47224440|emb|CAG08690.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 16 DAIKMFVGQIPRSWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 75
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 76 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 135
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 136 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 195
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 74/124 (59%), Gaps = 26/124 (20%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF---- 386
S + S GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCF
Sbjct: 392 SVAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGECV 451
Query: 387 ----------------------GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 424
GFVSY++P SAQ AI MNG Q+G K+LKVQLKR
Sbjct: 452 LCSASAPQRSLLRRLKRLSCSSGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKND 511
Query: 425 NKPY 428
+KPY
Sbjct: 512 SKPY 515
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 96 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 154
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 155 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 194
>gi|410908157|ref|XP_003967557.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Takifugu
rubripes]
Length = 482
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVS
Sbjct: 385 SVAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVS 444
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 445 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 482
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|410908153|ref|XP_003967555.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Takifugu
rubripes]
Length = 510
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 98 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 158 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 217
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVS
Sbjct: 413 SVAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVS 472
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 473 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 510
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 118 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 177 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 216
>gi|395827349|ref|XP_003786867.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Otolemur
garnettii]
Length = 490
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|410908159|ref|XP_003967558.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 5 [Takifugu
rubripes]
Length = 490
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 72/92 (78%)
Query: 337 GTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 396
G GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVSY++P S
Sbjct: 399 GVGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVSYDNPVS 458
Query: 397 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 AQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|390338611|ref|XP_781047.3| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 520
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 118/184 (64%), Gaps = 5/184 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F++F + E+ +++D+ T +GC F+ R+ A
Sbjct: 44 DHDAIKLFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAI 103
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+A A H +KTLPG + LQVK AD E + KLF+GML K +E EV A+F+ +G I
Sbjct: 104 RAQKALHEQKTLPGMTRALQVKPADSESRGEDRKLFVGMLNKAQTEEEVRAMFTHFGKID 163
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ IL+ S+GCAF+K+ T+++A+ A+ +IN ++ LVVK+ADTEKERQ R
Sbjct: 164 ECTILKDPNGISRGCAFVKFSTRKEAVGAINSIN-----MSANPNLVVKFADTEKERQLR 218
Query: 191 RAQK 194
R Q+
Sbjct: 219 RMQQ 222
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 79/130 (60%), Gaps = 3/130 (2%)
Query: 299 QYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQE 358
QY YP G + + P +A + G GP G NLFIYH+PQEFGD E
Sbjct: 394 QYAATYPAAFGGLTQGFATTAAQQPVLA---AAPQREGEYGPEGCNLFIYHLPQEFGDAE 450
Query: 359 LGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQL 418
L F FG+V+S+KVFVD+ T SKCFGFVS+++P AQ AI MNG Q+G K+LKVQ
Sbjct: 451 LTQMFVPFGQVISSKVFVDRVTNQSKCFGFVSFDNPQCAQAAIQAMNGFQIGMKRLKVQH 510
Query: 419 KRDNKQNKPY 428
KR NKPY
Sbjct: 511 KRPKDANKPY 520
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 15/126 (11%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K TE ++ AMF F +DE I+KD SRGC FV +R
Sbjct: 128 DSESRGEDRKLFVGMLNKAQTEEEVRAMFTHFGKIDECTILKDPNG-ISRGCAFVKFSTR 186
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL-----FIGMLPKNVSEAEVSA 121
+EA A+N+ + A+ L VK+AD E ER ++ +G+ ++ VS+
Sbjct: 187 KEAVGAINSINMS-----ANPNLVVKFADTEKERQLRRMQQMSNSMGLF----NQMAVSS 237
Query: 122 LFSIYG 127
S+YG
Sbjct: 238 PISLYG 243
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ +++L F+ FGR+ V D+ TGV K F++Y ES AQ A+
Sbjct: 50 LFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAIRAQKAL 109
>gi|410908155|ref|XP_003967556.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Takifugu
rubripes]
Length = 468
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 42 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 102 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 161
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 162 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 221
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ+L F FG ++SAKVF+DK T +SKCFGFVS
Sbjct: 371 SVAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNMVSAKVFIDKQTNLSKCFGFVS 430
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 431 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 468
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 122 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 180
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 181 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 220
>gi|444707599|gb|ELW48864.1| CUGBP Elav-like family member 1 [Tupaia chinensis]
Length = 487
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 121/184 (65%), Gaps = 5/184 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKG-CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
I++ +ILRG S+G CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K++
Sbjct: 134 IEECRILRGPDGLSRGGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 193
Query: 188 QARR 191
+ +R
Sbjct: 194 EQKR 197
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 376 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 435
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 436 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 487
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ + GC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGGCAF 153
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 154 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 198
>gi|395827347|ref|XP_003786866.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Otolemur
garnettii]
Length = 521
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|395827351|ref|XP_003786868.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Otolemur
garnettii]
Length = 514
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|348513017|ref|XP_003444039.1| PREDICTED: CUGBP Elav-like family member 2-like [Oreochromis
niloticus]
Length = 531
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+T S+GCCFV +R+ A
Sbjct: 58 DSIKMFVGQIPRSWSETELKELFEPFGAVHQINILRDRTQNPPQSKGCCFVTFYTRKAAL 117
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLF+GM+ K E EV +FS +G
Sbjct: 118 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFVGMVSKKYGENEVRMMFSSFGQ 177
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK+ADT+++++
Sbjct: 178 IEECRILRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKFADTQRDKE 237
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQE GDQ+L F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 434 SVAGSQKEGPEGANLFIYHLPQECGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 493
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 494 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 531
>gi|410918516|ref|XP_003972731.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Takifugu
rubripes]
Length = 521
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ + SL G G P Y QA+ S L
Sbjct: 226 QRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALLQQAASSGNL 272
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 432 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 491
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 492 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|410963193|ref|XP_003988150.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Felis catus]
Length = 496
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 22 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 81
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 82 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 141
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 142 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 201
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 399 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 458
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 496
>gi|197099692|ref|NP_001125976.1| CUGBP Elav-like family member 1 [Pongo abelii]
gi|75070672|sp|Q5R995.1|CELF1_PONAB RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|55729876|emb|CAH91665.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 119/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +IL G S+GCA + + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILWGPDGLSRGCALVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 402 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 461
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 462 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 513
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I+ SRGC
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILWGPDG-LSRGCAL 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|55731735|emb|CAH92572.1| hypothetical protein [Pongo abelii]
Length = 490
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHPPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|348521218|ref|XP_003448123.1| PREDICTED: CUGBP Elav-like family member 2-like [Oreochromis
niloticus]
Length = 483
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ + SL G G P Y QA+ S L
Sbjct: 194 QRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALLQQAASSGNL 240
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 394 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 453
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 454 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 483
>gi|1568643|gb|AAB09040.1| RNA-binding protein BRUNOL3 [Homo sapiens]
Length = 490
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQHILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|68303645|ref|NP_001020247.1| CUGBP Elav-like family member 2 isoform 1 [Homo sapiens]
gi|332833597|ref|XP_003312503.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Pan
troglodytes]
gi|397515224|ref|XP_003827856.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Pan paniscus]
gi|403278087|ref|XP_003930660.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Saimiri
boliviensis boliviensis]
gi|4104559|gb|AAD02074.1| neuroblastoma apoptosis-related RNA binding protein [Homo sapiens]
gi|15217394|gb|AAK92699.1| neuroplastoma apoptosis-related RNA-binding protein 1 [Homo
sapiens]
gi|119606754|gb|EAW86348.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_c [Homo
sapiens]
Length = 490
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|159032037|ref|NP_001103701.1| CUGBP Elav-like family member 2 isoform 4 [Mus musculus]
gi|3452501|emb|CAA09102.1| ETR-R3a protein [Rattus norvegicus]
gi|74144402|dbj|BAE36053.1| unnamed protein product [Mus musculus]
Length = 490
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|441603563|ref|XP_003262134.2| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 4
[Nomascus leucogenys]
Length = 458
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 119/198 (60%), Gaps = 11/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R++A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCSFLSYCQREQA- 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA + H ++ LP + P+QVK AD E + KLF+GML K SE +V
Sbjct: 109 KAHSDMHKQEVLPXMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 168
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 169 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 228
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 229 ADTDKERTMRRMQQMAGQ 246
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 391
LFI IP+ +++L F+ FG++ V D+ TG+ K F+SY
Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCSFLSY 102
>gi|402879617|ref|XP_003903428.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Papio anubis]
Length = 533
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 436 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 495
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 496 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 533
>gi|351703688|gb|EHB06607.1| CUG-BP- and ETR-3-like factor 2, partial [Heterocephalus glaber]
Length = 496
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 20 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 80 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 139
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 140 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 199
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 399 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 458
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 496
>gi|22137759|gb|AAH36391.1| CUGBP2 protein [Homo sapiens]
gi|119606753|gb|EAW86347.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 521
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|189054263|dbj|BAG36783.1| unnamed protein product [Homo sapiens]
Length = 509
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
>gi|402879615|ref|XP_003903427.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Papio anubis]
Length = 521
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|4249668|gb|AAD13761.1| apoptosis-related RNA binding protein [Homo sapiens]
Length = 509
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ + F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQHILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
>gi|134152680|ref|NP_006552.3| CUGBP Elav-like family member 2 isoform 2 [Homo sapiens]
gi|348575363|ref|XP_003473459.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Cavia
porcellus]
Length = 521
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|119606755|gb|EAW86349.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 509
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
>gi|194227176|ref|XP_001916706.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 1 [Equus
caballus]
gi|344277695|ref|XP_003410635.1| PREDICTED: CUGBP Elav-like family member 2-like [Loxodonta
africana]
gi|345793487|ref|XP_003433765.1| PREDICTED: CUGBP, Elav-like family member 2 [Canis lupus
familiaris]
Length = 488
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|301787201|ref|XP_002929016.1| PREDICTED: CUGBP Elav-like family member 2-like [Ailuropoda
melanoleuca]
Length = 488
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|332833599|ref|XP_507653.3| PREDICTED: CUGBP, Elav-like family member 2 isoform 4 [Pan
troglodytes]
gi|410349369|gb|JAA41288.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 521
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 424 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 483
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 484 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
>gi|332833593|ref|XP_003312501.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 1 [Pan
troglodytes]
gi|397515222|ref|XP_003827855.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Pan paniscus]
gi|403278083|ref|XP_003930658.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|380808894|gb|AFE76322.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
Length = 514
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|14701786|gb|AAK72224.1| neuroplastoma apoptosis-related RNA-binding protein 2 [Homo
sapiens]
Length = 509
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 412 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 471
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
>gi|410963191|ref|XP_003988149.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Felis catus]
Length = 514
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|327272094|ref|XP_003220821.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Anolis
carolinensis]
Length = 488
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|449480621|ref|XP_002190740.2| PREDICTED: CUGBP Elav-like family member 2 [Taeniopygia guttata]
Length = 490
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 393 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 452
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 453 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>gi|338721613|ref|XP_003364408.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Equus
caballus]
gi|345793484|ref|XP_857942.2| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Canis lupus
familiaris]
Length = 514
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|291401988|ref|XP_002717491.1| PREDICTED: CUG triplet repeat, RNA binding protein 2-like
[Oryctolagus cuniculus]
Length = 532
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
>gi|348575365|ref|XP_003473460.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Cavia
porcellus]
Length = 532
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
>gi|134152696|ref|NP_058893.2| CUGBP Elav-like family member 2 isoform 1 [Rattus norvegicus]
gi|3451291|emb|CAA09103.1| ETR-R3b protein [Rattus norvegicus]
Length = 532
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
>gi|351699026|gb|EHB01945.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 483
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCC V +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ + +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEEYRILRGPDGLSRGCAFVTFTTRGMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 79/113 (69%), Gaps = 7/113 (6%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 371 PTLYNQNLLTQQSIGAAGSQKEGPQGANLFIYHLPQEFGDQDLLQMFVPFGNVVSAKVFI 430
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK-QNKPY 428
DK T +SKCF FVSY++P SAQ AI +NG Q+G K+LKVQLKR +K NKPY
Sbjct: 431 DKQTNLSKCFSFVSYDNPLSAQAAIQSVNGFQIGMKQLKVQLKRSSKNDNKPY 483
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + + TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQIEEYRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++ ++S
Sbjct: 153 VTFTTRGMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM---ARQLQQQMQQIS 209
Query: 121 ALFSIYGTIKDLQILR 136
A S++G + L LR
Sbjct: 210 AA-SVWGNLAGLNTLR 224
>gi|354467972|ref|XP_003496441.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3
[Cricetulus griseus]
Length = 532
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 73/98 (74%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP ANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 435 SAAGSQKEGPEMANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 494
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 495 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 532
>gi|156717754|ref|NP_001096417.1| CUGBP Elav-like family member 2 [Xenopus (Silurana) tropicalis]
gi|152013392|sp|A4IIM2.1|CELF2_XENTR RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|134024252|gb|AAI36077.1| LOC100125022 protein [Xenopus (Silurana) tropicalis]
Length = 513
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 416 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 475
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 476 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 513
>gi|29436780|gb|AAH49453.1| Cugbp1 protein [Danio rerio]
Length = 534
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 140/237 (59%), Gaps = 8/237 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV +R+ A
Sbjct: 52 DSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 111
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLF+GM+ K +E ++ +FS YG
Sbjct: 112 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQ 171
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+ CAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 172 IEECRILRGPDGLSR-CAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 230
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
+R + Q NA S +L G +G P Y Q S S G L PM
Sbjct: 231 QKRIAQQLQQQMQQLNAASMWGNLTGLNSLG--PQYLAL-LQQSASSGNALNNLHPM 284
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 77/104 (74%)
Query: 325 VANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSK 384
++ N S + S GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SK
Sbjct: 431 LSQQNVSAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSK 490
Query: 385 CFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
CFGFVSY++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 491 CFGFVSYDNPVSSQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 534
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGC 58
M + EK ++ E KLFVG + K E + MF + ++E I++ D +R C
Sbjct: 132 MKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQIEECRILRGPDGLSR----C 187
Query: 59 CFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
FV +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 188 AFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRI 234
>gi|395539011|ref|XP_003771467.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Sarcophilus
harrisii]
Length = 536
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 439 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 498
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
>gi|326911121|ref|XP_003201910.1| PREDICTED: CUGBP Elav-like family member 2-like [Meleagris
gallopavo]
Length = 526
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 429 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 488
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 489 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 526
>gi|327272098|ref|XP_003220823.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Anolis
carolinensis]
Length = 536
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 447 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 506
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 507 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
>gi|395539013|ref|XP_003771468.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Sarcophilus
harrisii]
Length = 540
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 72/91 (79%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 450 SGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSA 509
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 510 QAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 540
>gi|285002208|ref|NP_001165444.1| CUG triplet repeat, RNA binding protein 2-b [Xenopus laevis]
gi|1568645|gb|AAB09041.1| Etr-3 [Xenopus laevis]
Length = 538
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 449 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 508
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 509 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 538
>gi|327272092|ref|XP_003220820.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Anolis
carolinensis]
Length = 536
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 439 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 498
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
>gi|148225362|ref|NP_001079593.1| CUGBP Elav-like family member 2 [Xenopus laevis]
gi|82241541|sp|Q7ZXE2.1|CELF2_XENLA RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|27924438|gb|AAH45035.1| Cugbp2-A-prov protein [Xenopus laevis]
Length = 536
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 439 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 498
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 499 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536
>gi|440904320|gb|ELR54847.1| CUGBP Elav-like family member 2, partial [Bos grunniens mutus]
Length = 519
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 20 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 80 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 139
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 140 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 199
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 422 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 481
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 482 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 519
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 100 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 158
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 159 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 198
>gi|440800622|gb|ELR21658.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 229
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVGQVPK++ EA + + F + + +NI++D+ T+ S+GC FV +++ ADKA++A
Sbjct: 13 KLFVGQVPKNVQEATIRSFFSPYGEIVHMNILRDRFTQISKGCGFVSYSTKEAADKAISA 72
Query: 76 CHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
H+ T+P ++PLQV+YAD EL+++ EHKLFIG LP V+E + +F+ YG I+ L I
Sbjct: 73 LHSVVTIPPHTAPLQVRYADEELQQMAEHKLFIGKLPTTVTEELLRQIFAPYGNIEKLNI 132
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
L+G + C F+KY+ +E+A A+ A+NG K+ GS+ PLVVK+ADT
Sbjct: 133 LKGPADVN--CGFVKYDNREEAEKAIRALNG--KVVGSNEPLVVKYADT 177
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LF+ +P+ + + + F +G ++ + D+ T +SK GFVSY + +A AI+ +
Sbjct: 14 LFVGQVPKNVQEATIRSFFSPYGEIVHMNILRDRFTQISKGCGFVSYSTKEAADKAISAL 73
Query: 405 NGC 407
+
Sbjct: 74 HSV 76
>gi|410918520|ref|XP_003972733.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Takifugu
rubripes]
Length = 501
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 131/206 (63%), Gaps = 4/206 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFG 214
RR Q+ +Q N+ + SL G
Sbjct: 226 QRRLQQQLAQQMQQLNSATTWGSLTG 251
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 412 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 471
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 472 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 501
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 224
>gi|221057576|ref|XP_002261296.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247301|emb|CAQ40701.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 512
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 127/206 (61%), Gaps = 12/206 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+M E Q+ +F+EF +V EV II+DK T + FV S EAD A+
Sbjct: 87 IKLFIGRVPKNMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIR 146
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPK++SE V +F
Sbjct: 147 SLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSLPKSISEESVKEMF 206
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 207 SPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRFAE 266
Query: 183 TEKERQARRAQKAQSQANNLPNADSQ 208
+ +QA+ QS N+ SQ
Sbjct: 267 PKSAKQAQIPMNMQSMQNSAHGISSQ 292
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 57/84 (67%)
Query: 335 SGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESP 394
S +GPPGANLFI+H+P E+ +L AF FG +LSA++ +K+TG ++ F FVSYE+
Sbjct: 363 SDSSGPPGANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYENI 422
Query: 395 ASAQNAIAMMNGCQLGGKKLKVQL 418
SA AI+ MNG KKLKV +
Sbjct: 423 ESAAAAISQMNGFMALNKKLKVTV 446
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK ++E + MF + V+EV I+KD +T +GC FV +++
Sbjct: 180 ESGVDQAKLFIGSLPKSISEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 239
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+N+ + KKTL G + P++V++A+
Sbjct: 240 ALYAINSLNGKKTLEGCARPVEVRFAE 266
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LFI +P+ ++++ F+ FG V + DK T + K FV S + A N
Sbjct: 84 PVSIKLFIGRVPKNMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADN 143
Query: 400 AIAMMNGC-----QLGGKKLK 415
AI +N QLG ++K
Sbjct: 144 AIRSLNNQRTLDPQLGSLQVK 164
>gi|45383614|ref|NP_989591.1| CUGBP Elav-like family member 2 [Gallus gallus]
gi|31747199|gb|AAP57761.1| ELAV-type RNA-binding protein 3 variant 4 [Gallus gallus]
Length = 488
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 391 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 450
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 451 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
>gi|312068271|ref|XP_003137136.1| hypothetical protein LOAG_01549 [Loa loa]
gi|307767708|gb|EFO26942.1| hypothetical protein LOAG_01549 [Loa loa]
Length = 528
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ EA+ +F++F V ++N+++DK T+ASRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFVGMLNKKLTEDSVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+ S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE+ A+++
Sbjct: 139 TVLKDSEGKSRGCAFVTFAHRSCAQQAIRQVHLSQTMEGCSKPIVVKFADTQKEKDAKKS 198
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 324 AVANSNPSTSSSGGT-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 382
+V+N+ ST+ SG + GP G NLFIYH+PQ+F D +L F FG ++SAKVF+DK T +
Sbjct: 407 SVSNTGVSTAGSGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDKQTNL 466
Query: 383 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K NKPY
Sbjct: 467 SKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDNKPY 511
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 391
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTY 70
>gi|297300473|ref|XP_002805600.1| PREDICTED: CUGBP Elav-like family member 2-like [Macaca mulatta]
Length = 501
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 413 PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQA 472
Query: 400 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 473 AIQAMNGFQIGMKRLKVQLKRSKNDSKPY 501
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|345485141|ref|XP_001605146.2| PREDICTED: CUGBP Elav-like family member 2 [Nasonia vitripennis]
Length = 733
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 125/197 (63%), Gaps = 4/197 (2%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
+K + +K+FVGQVPK + E L +F+EF V ++N+++DK T +S+GCC + SR+
Sbjct: 194 EKPDPDNIKMFVGQVPKDLDENDLRTIFEEFGRVHQINVLRDKYTGSSKGCCAAMDYSRR 253
Query: 68 EA--DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
A K A + +T P+Q+K AD E R KLF+GML K +E +V +F +
Sbjct: 254 LALDTKRARAPESVRTFNQKLHPIQMKPADSE-NRSHRKLFVGMLSKKFTENDVRNMFDV 312
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YG I++ +LR + Q SKGCAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+K
Sbjct: 313 YGEIEECSVLRENGQ-SKGCAFVTFASKQSAVLAIKALHHSQTMEGCSSPLVVKFADTQK 371
Query: 186 ERQARRAQKAQSQANNL 202
++ +R Q+ Q+ N+
Sbjct: 372 DKDQKRLQQMQANLWNI 388
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+P + D +L F FG VLSAKVF+DK T SKCFGFVSY+ P+SAQ
Sbjct: 645 GPEGCNLFIYHLPHTYTDTDLIAMFMPFGNVLSAKVFIDKETKKSKCFGFVSYDKPSSAQ 704
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MM+G Q+G K+LKVQLK+ +K KPY
Sbjct: 705 KAIQMMHGFQIGTKRLKVQLKK-SKDAKPY 733
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 13/99 (13%)
Query: 306 GGMLGHRP--LNNSPGSVSPAVANSNPSTSSSGGT----------GPPGANLFIYHIPQE 353
G + H P N P SP+ S + T P +F+ +P++
Sbjct: 152 GKSISHHPHPYNKKPAQTSPSAPQSTTNGDQKENTIMNNNSVEKPDPDNIKMFVGQVPKD 211
Query: 354 FGDQELGNAFQAFGRVLSAKVFVDKATGVSK-CFGFVSY 391
+ +L F+ FGRV V DK TG SK C + Y
Sbjct: 212 LDENDLRTIFEEFGRVHQINVLRDKYTGSSKGCCAAMDY 250
>gi|393911007|gb|EJD76121.1| hypothetical protein, variant [Loa loa]
Length = 480
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ EA+ +F++F V ++N+++DK T+ASRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFVGMLNKKLTEDSVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+ S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE+ A+++
Sbjct: 139 TVLKDSEGKSRGCAFVTFAHRSCAQQAIRQVHLSQTMEGCSKPIVVKFADTQKEKDAKKS 198
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 324 AVANSNPSTSSSGGT-GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 382
+V+N+ ST+ SG + GP G NLFIYH+PQ+F D +L F FG ++SAKVF+DK T +
Sbjct: 359 SVSNTGVSTAGSGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDKQTNL 418
Query: 383 SKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K NKPY
Sbjct: 419 SKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDNKPY 463
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 391
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTY 70
>gi|345310083|ref|XP_001515840.2| PREDICTED: CUGBP, Elav-like family member 2 [Ornithorhynchus
anatinus]
Length = 426
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 4/102 (3%)
Query: 331 STSSSGGT----GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 386
+TSS+ G GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCF
Sbjct: 325 TTSSALGALTSPGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCF 384
Query: 387 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
GFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 385 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 426
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|326426729|gb|EGD72299.1| napor protein short isoform [Salpingoeca sp. ATCC 50818]
Length = 353
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
E+ +KLFVGQ+PK E QL A+ + + + ++ I+K+K T SRGC FV SRQ A
Sbjct: 19 DEDAIKLFVGQLPKSYGEEQLTALLQPYGAIHDMMILKNKMTGESRGCAFVTFCSRQSAL 78
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A+ H K+TLP ++P+QVK AD E + KLF+GM+ K +EA++ A+F +G I+
Sbjct: 79 SAIADLHEKRTLPTMANPMQVKIADSEQRGDDRKLFVGMISKTCTEADLEAMFRPFGEIE 138
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+ +L G + SKGCAF+KY A A+ ++ MEG P+VVK ADTE
Sbjct: 139 SVNVLIGPEGQSKGCAFVKYTNAGSANQAIAKLHNSTTMEGCRAPMVVKIADTE 192
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 80/126 (63%), Gaps = 13/126 (10%)
Query: 304 YPGGMLGHRPLNNSP-GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNA 362
YPG G +P +P G + A GPP +NLFIYH+PQE D L
Sbjct: 240 YPGAGFGQQPYAQAPYGGAARAPQKE----------GPPNSNLFIYHLPQELNDHSLAAT 289
Query: 363 FQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDN 422
F +FG V+S+KVFVDK TG SKCFGFVSY++P SAQ AI MNG Q+GGK+LKVQLKR
Sbjct: 290 FMSFGNVISSKVFVDKYTGQSKCFGFVSYDNPQSAQAAIQAMNGFQIGGKRLKVQLKR-- 347
Query: 423 KQNKPY 428
+N PY
Sbjct: 348 PKNAPY 353
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LF+ +P+ +G+++L Q +G + + +K TG S+ FV++ S SA +AIA +
Sbjct: 25 LFVGQLPKSYGEEQLTALLQPYGAIHDMMILKNKMTGESRGCAFVTFCSRQSALSAIADL 84
Query: 405 N 405
+
Sbjct: 85 H 85
>gi|440792905|gb|ELR14112.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 458
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 112/188 (59%), Gaps = 20/188 (10%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+GQ+PK MTE + +F F + EV II+++ T SRGC FV + A+ A+
Sbjct: 104 VKLFIGQLPKSMTEPYIGPLFAPFGNLVEVAIIRNRATGESRGCAFVTYDNADSAELAIE 163
Query: 75 ACHNKKTLPGASSPLQVKYAD---GELER-----------------LEHKLFIGMLPKNV 114
HNK+TLPG +SP+QVKYA G+ R E KLFIGMLP+ V
Sbjct: 164 TLHNKQTLPGMTSPIQVKYAHGGGGDAPRYTPAPVPDYGMPGMDNMTEFKLFIGMLPRTV 223
Query: 115 SEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 174
E + A+F YG+I ++ +LR +S+GCAF+KY +E A+ A+ A NG+ +G +
Sbjct: 224 GEDGLRAIFQPYGSIIEVVVLREPDGSSRGCAFVKYHRREDAVNAINACNGQMFFQGQTN 283
Query: 175 PLVVKWAD 182
PL VK+AD
Sbjct: 284 PLTVKFAD 291
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%)
Query: 330 PSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 389
PS S+ GPPGANLFIYH+P +GD +L F FG++LS KVF+DK T VSK FGFV
Sbjct: 362 PSGMSNQAQGPPGANLFIYHLPTHYGDGDLLTLFSPFGQILSVKVFLDKMTMVSKGFGFV 421
Query: 390 SYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
SY S SA+ AI M+G Q+G K+LKVQLK+
Sbjct: 422 SYASADSARLAIENMDGLQVGEKRLKVQLKK 452
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+G +P+ + E L A+F+ + + EV ++++ +SRGC FV R++A A+NA
Sbjct: 213 KLFIGMLPRTVGEDGLRAIFQPYGSIIEVVVLREPDG-SSRGCAFVKYHRREDAVNAINA 271
Query: 76 CHNKKTLPGASSPLQVKYADG 96
C+ + G ++PL VK+ADG
Sbjct: 272 CNGQMFFQGQTNPLTVKFADG 292
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LFI +P+ + +G F FG ++ + ++ATG S+ FV+Y++ SA+ AI +
Sbjct: 106 LFIGQLPKSMTEPYIGPLFAPFGNLVEVAIIRNRATGESRGCAFVTYDNADSAELAIETL 165
Query: 405 NGCQ-LGGKKLKVQLK 419
+ Q L G +Q+K
Sbjct: 166 HNKQTLPGMTSPIQVK 181
>gi|440906742|gb|ELR56971.1| CUGBP Elav-like family member 3, partial [Bos grunniens mutus]
Length = 476
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 120/199 (60%), Gaps = 13/199 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 6 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 65
Query: 73 VNACHNKKTLPGASSPLQVKYAD-----------GELERLEHKLFIGMLPKNVSEAEVSA 121
+A H +KTLPG + P+QVK AD G++ + KLF+GML K ++ +V
Sbjct: 66 QSALHEQKTLPGMNRPIQVKPADSESRGGRFCTFGKVGMKDRKLFVGMLGKQQTDEDVRK 125
Query: 122 LFSIYGTIKDLQILRGSQQ--TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
+F +GTI + L S S GCAF+K++T +A AA+ ++ + G+S LVVK
Sbjct: 126 MFEPFGTIDEWWALTPSSSLLNSSGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVK 185
Query: 180 WADTEKERQARRAQKAQSQ 198
+ADTEKER RR Q+ +Q
Sbjct: 186 FADTEKERGLRRMQQVATQ 204
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 387 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 446
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 447 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 476
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 5 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 64
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 65 AQSALHEQKTLPGMNRPIQVKPADSESR 92
>gi|402592937|gb|EJW86864.1| ELAV-type RNA binding protein variant B [Wuchereria bancrofti]
Length = 509
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ EA+ +F++F V ++N+++DK T+ SRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E +V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFVGMLNKKLTEDDVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+ S+GCAF+ + + A A++ ++ MEG S P+VVK+ADT+KE+ A++
Sbjct: 139 TVLKDSEGKSRGCAFVTFAHRSCAQQAIKQVHLSQTMEGCSKPIVVKFADTQKEKDAKKI 198
Query: 193 QKAQSQANNLPNADS 207
Q PN+ +
Sbjct: 199 CLLQLLQTAQPNSST 213
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 81/109 (74%), Gaps = 6/109 (5%)
Query: 325 VANSNPST---SSSGG--TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
A+S P+T ++SGG GP G NLFIYH+PQ+F D +L F FG ++SAKVF+DK
Sbjct: 385 TASSTPNTGMNTTSGGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDKQ 444
Query: 380 TGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
T +SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K +KPY
Sbjct: 445 TNLSKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDSKPY 492
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 391
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTY 70
>gi|341896837|gb|EGT52772.1| CBN-ETR-1 protein [Caenorhabditis brenneri]
Length = 585
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P++ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 46 DTIKMFVGQIPRNWNEVDCRRLFEQYGPVFSCNILRDKSTQASKGCCFVTFFHRKDAIEA 105
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +FS YG I+D
Sbjct: 106 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFSKYGQIEDC 164
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 165 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 222
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 79/108 (73%), Gaps = 11/108 (10%)
Query: 330 PSTSSSGGT---------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 380
P+TSSS G+ GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T
Sbjct: 478 PATSSSVGSQMVGNGDVRGPDGANLFIYHLPQDFGDTDLINTFAPFGAILSAKVFIDKVT 537
Query: 381 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+SKC+GFVS+E+P SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 538 NLSKCYGFVSFENPQSATNAISAMNGFQIGSKRLKVQLKVD--RGHPY 583
>gi|228480217|ref|NP_001153184.1| CUGBP Elav-like family member 2 isoform 1 [Pongo abelii]
gi|55733625|emb|CAH93489.1| hypothetical protein [Pongo abelii]
Length = 514
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++++++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQIDVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECWILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 417 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 476
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 477 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 514
>gi|345802740|ref|XP_003434959.1| PREDICTED: CUGBP, Elav-like family member 4 [Canis lupus
familiaris]
Length = 448
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 111/188 (59%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F SR
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCRFSTYCSRPSNL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+ H + +LPG + P+QVK AD E + KLF+GML SE +V L I+
Sbjct: 110 RDRGTRHGEGSLPGMNRPIQVKPADSESRGEDRKLFVGMLNTQQSEDDVRRLVKALRNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
>gi|55729085|emb|CAH91279.1| hypothetical protein [Pongo abelii]
Length = 360
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S +VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSSIVVKFADTQKDKE 217
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SS + VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSSIVVKFADTQKDK 216
>gi|193204850|ref|NP_001122630.1| Protein ETR-1, isoform e [Caenorhabditis elegans]
gi|351063346|emb|CCD71501.1| Protein ETR-1, isoform e [Caenorhabditis elegans]
Length = 586
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +SKCFGFVSYE+ SA
Sbjct: 497 GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 556
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 557 NAISAMNGFQIGSKRLKVQLKVD--RGNPY 584
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 327 NSNPSTSSSGGTGPP-------GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
++ PST++ P +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 380 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|193204852|ref|NP_001122631.1| Protein ETR-1, isoform f [Caenorhabditis elegans]
gi|351063347|emb|CCD71502.1| Protein ETR-1, isoform f [Caenorhabditis elegans]
Length = 588
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +SKCFGFVSYE+ SA
Sbjct: 499 GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 558
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 559 NAISAMNGFQIGSKRLKVQLKVD--RGNPY 586
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 327 NSNPSTSSSGGTGPP-------GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
++ PST++ P +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 380 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|50261759|gb|AAT72460.1| FCA gamma protein [Lolium perenne]
Length = 668
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 114/176 (64%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ +E + + +E V EV +I+DK T + CCFV + + A +A+
Sbjct: 52 VKLFVGTVPRIASEDDVRHLSEEHGDVLEVALIRDKKTGEQQECCFVKYATSEGAKRAIR 111
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P++V+YAD E ERL EHKLF+ L K + E+ +FS +G ++D
Sbjct: 112 ALHNQYTIPGAMGPVEVRYADCEKERLGSIEHKLFVASLNKQATAKEIEEIFSPFGHVED 171
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+++ +KE AL+A+ +++G + M G PL+V++AD ++ R
Sbjct: 172 VYIMKDGTRQSRGCGFVEFSSKEPALSAVNSLSGTYIMRGCEQPLIVRFADPKRPR 227
>gi|196475703|gb|ACG76412.1| trinucleotide repeat containing 4 (predicted) [Otolemur garnettii]
Length = 564
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 119/187 (63%), Gaps = 3/187 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME-GSSVPLVVKWADTEKERQARR 191
+LRG TSKG LK+ + +++ +++ H+ E G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGLPLLKHMPLQPSIS--PSLSVCHQEERGASSSLVVKFADTEKERGLRR 182
Query: 192 AQKAQSQ 198
Q+ +Q
Sbjct: 183 MQQVATQ 189
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 67/87 (77%)
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ AI
Sbjct: 478 GCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAI 537
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR N+PY
Sbjct: 538 QAMNGFQIGMKRLKVQLKRPKDANRPY 564
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K T+ + MF+ F +DE +++ + P +
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGLPLLKHMPLQ 146
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+++ CH ++ GASS L VK+AD E ER
Sbjct: 147 PSISPSLSVCHQEER--GASSSLVVKFADTEKER 178
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|268533976|ref|XP_002632118.1| C. briggsae CBR-ETR-1 protein [Caenorhabditis briggsae]
Length = 574
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+ S+GCCFV R++A +A
Sbjct: 50 DAIKMFVGQIPRQWNEVDCRRLFEQYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEA 109
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 110 QGALHNIKVIDGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGLIEDC 168
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR + S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 169 SVLRDNDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 226
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQ+FGD +L N F FG++LSAKVF+DK T +SKC+GFVSYE+P SA
Sbjct: 485 GPDGANLFIYHLPQDFGDTDLINTFAPFGQILSAKVFIDKVTNLSKCYGFVSYETPQSAN 544
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
NAIA MNG Q+G K+LKVQLK D + PY
Sbjct: 545 NAIAAMNGFQIGSKRLKVQLKVD--RGNPY 572
>gi|17532857|ref|NP_493673.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
gi|1289522|gb|AAA98566.1| elav-type ribonucleoprotein [Caenorhabditis elegans]
gi|151936111|gb|ABS18832.1| ELAV-type RNA binding protein variant A [Caenorhabditis elegans]
gi|351063336|emb|CCD71491.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
Length = 584
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +SKCFGFVSYE+ SA
Sbjct: 495 GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 554
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 555 NAISAMNGFQIGSKRLKVQLKVD--RGNPY 582
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 327 NSNPSTSSSGGTGP-------PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
++ PST++ P +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 380 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|193204854|ref|NP_001122632.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
gi|151936119|gb|ABS18836.1| ELAV-type RNA binding protein variant E [Caenorhabditis elegans]
gi|351063348|emb|CCD71503.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
Length = 513
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +SKCFGFVSYE+ SA
Sbjct: 424 GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 483
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 484 NAISAMNGFQIGSKRLKVQLKVD--RGNPY 511
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 327 NSNPSTSSSGGTGPP-------GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
++ PST++ P +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 380 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|328873245|gb|EGG21612.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 370
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 115/180 (63%), Gaps = 4/180 (2%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
K+FVG +P M E +L +F +F + ++IIKDK T RGC F+ +++EAD A+N
Sbjct: 15 KVFVGHIPLTMKEDELSEIFDKFGSILNISIIKDKKTSVPRGCAFISYGTKEEADNAINT 74
Query: 76 CHNKKTLPG-ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
+ G + PLQVKY+D E+E++E KLF+GML + +E ++ LFS YG I+D+ I
Sbjct: 75 MNATNQYIGDMNKPLQVKYSDNEIEKMERKLFVGMLGTS-NEDQIKQLFSKYGNIEDINI 133
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+R KG F+K+ +E+A A+ ++ K + GS++P++VK+ADT ERQ R+ Q+
Sbjct: 134 VREPDGKPKGYGFVKFSMREEAEEAIRDMDSKQTLPGSTLPIIVKFADT--ERQKRKKQQ 191
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 57/78 (73%)
Query: 344 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 403
+LFIY++P +GD EL N FQ +G V+SAKVF+DK TG SKCFGFVSY+ SA AI
Sbjct: 291 DLFIYYLPASYGDAELKNLFQQYGNVVSAKVFIDKNTGQSKCFGFVSYDRSQSAIQAINN 350
Query: 404 MNGCQLGGKKLKVQLKRD 421
+NG + GKKLKV KRD
Sbjct: 351 LNGFHVEGKKLKVNFKRD 368
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P G +F+ HIP + EL F FG +L+ + DK T V + F+SY + A N
Sbjct: 11 PQGFKVFVGHIPLTMKEDELSEIFDKFGSILNISIIKDKKTSVPRGCAFISYGTKEEADN 70
Query: 400 AIAMMNGC 407
AI MN
Sbjct: 71 AINTMNAT 78
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC-AFLKYETKEQALAALE 161
+ LFI LP + +AE+ LF YG + ++ C F+ Y+ + A+ A+
Sbjct: 290 NDLFIYYLPASYGDAELKNLFQQYGNVVSAKVFIDKNTGQSKCFGFVSYDRSQSAIQAIN 349
Query: 162 AINGKHKMEGSSVPLVVK 179
+NG H +EG + + K
Sbjct: 350 NLNGFH-VEGKKLKVNFK 366
>gi|389584459|dbj|GAB67191.1| RNA-binding protein [Plasmodium cynomolgi strain B]
Length = 567
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 119/188 (63%), Gaps = 12/188 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK M E Q+ +F+EF +V EV II+DK T + FV S EAD A+
Sbjct: 88 IKLFIGRVPKSMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIR 147
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPK+++E V +F
Sbjct: 148 SLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSLPKSITEESVKEMF 207
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 208 SPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRFAE 267
Query: 183 TEKERQAR 190
+ +Q +
Sbjct: 268 PKSAKQTQ 275
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 55/80 (68%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GPPGANLFI+H+P E+ +L AF FG +LSA++ +K+TG ++ F FVSYES SA
Sbjct: 422 GPPGANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAA 481
Query: 399 NAIAMMNGCQLGGKKLKVQL 418
AI+ MNG KKLKV +
Sbjct: 482 AAISQMNGFMALNKKLKVTV 501
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK +TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 181 ESGVDQAKLFIGSLPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 240
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+N+ + KKTL G + P++V++A+
Sbjct: 241 ALYAINSLNGKKTLEGCARPVEVRFAE 267
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LFI +P+ ++++ F+ FG V + DK T + K FV S + A N
Sbjct: 85 PVSIKLFIGRVPKSMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADN 144
Query: 400 AIAMMNGC-----QLGGKKLK 415
AI +N QLG ++K
Sbjct: 145 AIRSLNNQRTLDPQLGSLQVK 165
>gi|146386739|pdb|2DHS|A Chain A, Solution Structure Of Nucleic Acid Binding Protein
Cugbp1ab And Its Binding Study With Dna And Rna
Length = 187
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A
Sbjct: 16 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I+
Sbjct: 76 QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+AD
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 187
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
V +R A A+ A H +T+ G SSP+ VK+AD
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 187
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEK 101
>gi|310689909|pdb|3NNC|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
Length = 175
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A
Sbjct: 4 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 63
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I+
Sbjct: 64 QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIE 123
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+AD
Sbjct: 124 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 175
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 82 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 140
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
V +R A A+ A H +T+ G SSP+ VK+AD
Sbjct: 141 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 175
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 5 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 64
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 65 NALHNMKVLPGMHHPIQMKPADSEK 89
>gi|32482055|gb|AAP84374.1| FCA-A1 [Triticum aestivum]
Length = 602
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
Query: 34 MFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93
+F++ V EV +I+D+ T +GCCFV + +EA++A+ A HN+ T+PGA P+QV+Y
Sbjct: 4 LFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRALHNQCTIPGAMGPVQVRY 63
Query: 94 ADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKY 150
ADGE ER +EHKLF+ L K + E+ +F+ +G ++D+ I++ + S+GC F+K+
Sbjct: 64 ADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVEDVYIMKDGMRQSRGCGFVKF 123
Query: 151 ETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 124 SSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 160
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ +KE+ S E KLFV + K T ++ +F F V++V I+KD R SRGC FV
Sbjct: 64 ADGEKERHGSIEH-KLFVASLNKQATAKEIEEIFAPFGHVEDVYIMKDG-MRQSRGCGFV 121
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S++ A A+N+ + G PL V++AD + R
Sbjct: 122 KFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 160
>gi|151936115|gb|ABS18834.1| ELAV-type RNA binding protein variant C [Caenorhabditis elegans]
Length = 378
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 327 NSNPSTSSSGGTGP-------PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
++ PST++ P +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 380 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|344306569|ref|XP_003421958.1| PREDICTED: CUGBP Elav-like family member 5-like [Loxodonta
africana]
Length = 440
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 176/374 (47%), Gaps = 56/374 (14%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEA 117
C F+ +R A KA A H +KTLPG + P+QVK AD E G L S A
Sbjct: 120 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG------GGPLGTGSSGA 173
Query: 118 EVSALFSIYG-TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+ L + I++ Q GCAF+K+ + +A AA+ H + GS +
Sbjct: 174 QWYTLTTTPPPNIRETQHPHPYPSLGAGCAFVKFSSHTEAQAAI------HALHGSQT-M 226
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
V A ++Q + S + H GA+ + P + + G
Sbjct: 227 PVSRATMLMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLP-----ATPIAPASG 281
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
L PP+ G++ P+ G A G P F G G+PA+
Sbjct: 282 LHS---PPLLGTTAVPGLVTPITNGFA--GVVP-----------------FPG-GHPALE 318
Query: 297 GLQYPMPYPGGMLGHRPLNNSPGSVSPAVANS-NPSTSSSGG-TGPPGANLFIYHIPQEF 354
+ Y G++ + + SP VA + +P+ S TGP G NLFIYH+PQEF
Sbjct: 319 TV-----YANGLVPYP-------AQSPTVAETLHPAFSGVQQYTGPEGCNLFIYHLPQEF 366
Query: 355 GDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKL 414
GD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+L
Sbjct: 367 GDTELTQMFLPFGNVISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQVGMKRL 426
Query: 415 KVQLKRDNKQNKPY 428
KVQLKR PY
Sbjct: 427 KVQLKRPKDPGHPY 440
>gi|32482057|gb|AAP84375.1| mutant FCA-D1 [Triticum aestivum]
Length = 284
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 107/160 (66%), Gaps = 3/160 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 125 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 184
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 185 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEVFAPFGHVED 244
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G
Sbjct: 245 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRG 284
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQALAA 159
KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+KY T E+A A
Sbjct: 126 KLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFVKYATSEEAERA 182
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQ 188
+ A++ + + G+ P+ V++AD EKER
Sbjct: 183 IRALHNQCTIPGAMGPVQVRYADGEKERH 211
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ + ++ F+ G VL + D+ TG + FV Y + A+ AI A+
Sbjct: 127 LFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRAL 186
Query: 404 MNGCQLGGKKLKVQLK 419
N C + G VQ++
Sbjct: 187 HNQCTIPGAMGPVQVR 202
>gi|73961237|ref|XP_852916.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Canis lupus
familiaris]
Length = 488
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 111/197 (56%), Gaps = 10/197 (5%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F SR +
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCRFSTYCSRPSNLR 110
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSA 121
H + +LPG + P+QVK AD E + KLF+GML SE +V
Sbjct: 111 DRGTRHGEGSLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNTQQSEDDVRR 170
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
L I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 171 LVKALRNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 230
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 231 DTDKERTMRRMQQMAGQ 247
>gi|297279975|ref|XP_002801847.1| PREDICTED: CUGBP Elav-like family member 3-like, partial [Macaca
mulatta]
Length = 438
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 102/158 (64%)
Query: 41 VDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ E+ +IKDK T +GC F+ +R A KA +A H +KTLPG + P+QVK AD E
Sbjct: 1 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRG 60
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
+ KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+
Sbjct: 61 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAI 120
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 121 NTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 158
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 349 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 408
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 409 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 438
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 55 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 111
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 112 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 147
>gi|321461546|gb|EFX72577.1| hypothetical protein DAPPUDRAFT_326142 [Daphnia pulex]
Length = 229
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 110/177 (62%), Gaps = 2/177 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E +KLFVGQ+P+++ EA L MF+EF + E+ ++KDK T +GC F+ +R+ A A
Sbjct: 34 EAIKLFVGQIPRNLEEADLRPMFEEFGKIYELTVLKDKLTGMHKGCAFLTYCTRESAINA 93
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H K+TLPG + P+QVK AD + + KLF+GML K ++ +V LF YGTI++
Sbjct: 94 QNALHEKRTLPGMNRPIQVKPADSDNRGEDRKLFVGMLSKQQTDEDVRQLFLPYGTIEEC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM--EGSSVPLVVKWADTEKER 187
ILRG SKGCAF+K+ T +A A+ +++G M SS L + D K++
Sbjct: 154 TILRGPDGQSKGCAFVKFSTHAEAQTAINSLHGSQTMPVSISSTHLDISNVDQNKKQ 210
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+N+ EA++ +F +G I +L +L+ KGCAFL Y T+E A+ A A
Sbjct: 37 KLFVGQIPRNLEEADLRPMFEEFGKIYELTVLKDKLTGMHKGCAFLTYCTRESAINAQNA 96
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ K + G + P+ VK AD++ + R+
Sbjct: 97 LHEKRTLPGMNRPIQVKPADSDNRGEDRK 125
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ + +L F+ FG++ V DK TG+ K F++Y ES +AQNA+
Sbjct: 38 LFVGQIPRNLEEADLRPMFEEFGKIYELTVLKDKLTGMHKGCAFLTYCTRESAINAQNAL 97
>gi|401397143|ref|XP_003879991.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
gi|325114399|emb|CBZ49956.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
Length = 475
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 13/187 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+ M +A L +F+EF V E II+DK T + FV S AD A+
Sbjct: 37 IKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFVKMGSIAAADAAIR 96
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ + L + P+ VKYA GE E+L + KLFIG +P+ ++E EV
Sbjct: 97 GLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPGQDQAKLFIGSIPRMMTEDEVRQF 156
Query: 123 FSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH EG S P+ V++A
Sbjct: 157 FSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHTFEGCSRPVEVRFA 216
Query: 182 DTEKERQ 188
+++ RQ
Sbjct: 217 ESKAARQ 223
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%)
Query: 334 SSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 393
+S GPPGAN+F++H+P E+ +L F FG V+SA+V D+ TG ++ F FVSY++
Sbjct: 336 NSNAEGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDN 395
Query: 394 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 424
SA A+ MNG GGK+LKV +K+ +Q
Sbjct: 396 VESAATAVNNMNGFMAGGKRLKVSVKKGEEQ 426
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+++ KLF+G +P+ MTE ++ F + V+EV ++KD +GCCFV ++EA
Sbjct: 134 QDQAKLFIGSIPRMMTEDEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
AV K T G S P++V++A+ + R + L
Sbjct: 194 AVRTLSGKHTFEGCSRPVEVRFAESKAARQQQLL 227
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
+E KLF+G +P+++ +A + +F +G +K+ I+R + K AF+K + A AA
Sbjct: 35 VEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFVKMGSIAAADAA 94
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKER 187
+ +N +E S P+ VK+A E E+
Sbjct: 95 IRGLNSTRILEQSMGPITVKYATGEAEK 122
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LF+ +PQ D L F+ FG V A + DKATG K FV S A+A AI +
Sbjct: 39 LFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFVKMGSIAAADAAIRGL 98
Query: 405 NGCQL 409
N ++
Sbjct: 99 NSTRI 103
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV VP T L+ F F V + D+TT +RG FV S + A A
Sbjct: 347 IFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFV---SYDNVESAATAV 403
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL 105
+N L+V GE + ++H L
Sbjct: 404 NNMNGFMAGGKRLKVSVKKGEEQYVQHLL 432
>gi|224068610|ref|XP_002302783.1| predicted protein [Populus trichocarpa]
gi|222844509|gb|EEE82056.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 110/180 (61%), Gaps = 10/180 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL++ +P+ TE + ++F+E V EV + +DK T + CFV + +EAD+A+ A
Sbjct: 81 KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYATFEEADRAIRA 140
Query: 76 CHNKKTLPGASSPLQVKYADGELER----------LEHKLFIGMLPKNVSEAEVSALFSI 125
HN+ T+PG +P +V+YADGE ER KL++G + K S+ E+ +FS
Sbjct: 141 LHNQHTIPGEVAPFKVRYADGERERPVARCSMVGGFVDKLYVGSINKLASKQEIEEIFSP 200
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YG ++D+ I R + S+GCAF+K+ ++ ALAA++ +NG M G PL+V++AD +K
Sbjct: 201 YGHVEDVYIARDELKQSRGCAFVKFAHRDMALAAIKGLNGTLTMRGCDQPLIVRFADPKK 260
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYE 151
Y DG + KL+I +P+ +E + +LF +G++ ++ + R + + F+KY
Sbjct: 73 YGDGGVNA---KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYA 129
Query: 152 TKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
T E+A A+ A++ +H + G P V++AD E+ER R
Sbjct: 130 TFEEADRAIRALHNQHTIPGEVAPFKVRYADGERERPVARC 170
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 333 SSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYE 392
SS G G A L+I IP+ ++ + + F+ G V+ + DK TG + + FV Y
Sbjct: 70 SSDYGDGGVNAKLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYA 129
Query: 393 SPASAQNAIAMMN 405
+ A AI ++
Sbjct: 130 TFEEADRAIRALH 142
>gi|449269404|gb|EMC80177.1| CUG-BP- and ETR-3-like factor 3, partial [Columba livia]
Length = 449
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 109/188 (57%), Gaps = 3/188 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E+ L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 9 DHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSAL 68
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 69 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIE 128
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKG + ++G M G+S LVVK+ADT+KER R
Sbjct: 129 ECTILRGPDGASKGGF---WGAGGAPHGCRHPLHGSQTMPGASSSLVVKFADTDKERTLR 185
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 186 RMHQMAGQ 193
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 360 GPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQ 419
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 420 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 449
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 340 PPGA---------NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
PPGA LF+ IP+ + +L F+ FGR+ V D+ TG+ K F++
Sbjct: 1 PPGAIAMKDHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLT 60
Query: 391 YESPASAQNA-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
Y + SA A A+ L G +Q+K + + +
Sbjct: 61 YCARDSALKAQSALHEQKTLPGMNRPIQVKPADSEGR 97
>gi|237832459|ref|XP_002365527.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|211963191|gb|EEA98386.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|221487976|gb|EEE26190.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii GT1]
gi|221508501|gb|EEE34070.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 648
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 16/195 (8%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
+KLFVG+VP + E L +F+ F V EV +I+DK+T R FV S AD +
Sbjct: 101 EIKLFVGRVPHTVDEEALRPIFESFGEVREVFVIRDKSTLKHRNSAFVKMASLAAADACI 160
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAE 118
A H+ + L A P+ VKYA GE ERL + KLF+G +P+ +SE E
Sbjct: 161 RALHSNRVLDAALGPIIVKYATGEAERLGMHSLGMGGEGGGVDQAKLFVGSIPRTMSEDE 220
Query: 119 VSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177
+ F YGT++++ +++ S T KGCAF+K++ KE+ L A+ +NGKH + + P+
Sbjct: 221 LRLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMRNLNGKHVFDECTRPVE 280
Query: 178 VKWADTEKERQARRA 192
V++A+++ +RQ + A
Sbjct: 281 VRFAESKSQRQQQMA 295
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GPPGAN+F++HIP E+ +L F FG ++S + VDKA+ ++ F FVSY++ SA
Sbjct: 404 GPPGANVFVFHIPNEWTKADLVQTFSGFGNIVSCHIAVDKASHRNRGFAFVSYDNIQSAA 463
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQN 425
NA+ MNGC + K+L V +K+ + +
Sbjct: 464 NAVNHMNGCLVANKRLNVSIKKGEEHH 490
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++ KLFVG +P+ M+E +L F+ + V+EV ++KD T +GC FV ++E A
Sbjct: 203 DQAKLFVGSIPRTMSEDELRLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHA 262
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER 100
+ + K + P++V++A+ + +R
Sbjct: 263 MRNLNGKHVFDECTRPVEVRFAESKSQR 290
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV +P T+A L+ F F + +I DK + +RG FV + Q A AVN
Sbjct: 410 VFVFHIPNEWTKADLVQTFSGFGNIVSCHIAVDKASHRNRGFAFVSYDNIQSAANAVN-- 467
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKLFI 107
H L A+ L V GE ++H L +
Sbjct: 468 HMNGCLV-ANKRLNVSIKKGEEHHVQHLLNV 497
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 343 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 402
A LF+ IP+ + EL FQ +G V V D ATG K FV ++ +A+
Sbjct: 205 AKLFVGSIPRTMSEDELRLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMR 264
Query: 403 MMNG 406
+NG
Sbjct: 265 NLNG 268
>gi|317419091|emb|CBN81129.1| CUG-BP-and ETR-3-like factor 4 [Dicentrarchus labrax]
Length = 527
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 112/187 (59%), Gaps = 5/187 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T + V R +
Sbjct: 48 HDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKVNLVVTKIFRSKT-- 105
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
+ H +T+ + P+QVK AD E + KLF+GML K SE +V LF +G+I++
Sbjct: 106 YLLPMHTLRTM---NRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIRR 222
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 223 MQQMAGQ 229
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 75/110 (68%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A + P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 418 GQISQAFPHPPPIIPQQQREGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDR 477
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 478 ATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPKDANRPY 527
>gi|70939105|ref|XP_740139.1| RNA binding protein [Plasmodium chabaudi chabaudi]
gi|56517645|emb|CAH76403.1| RNA binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 248
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 106/164 (64%), Gaps = 12/164 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+ E QL +F+EF +V+EV II+DK T + FV S EAD A+
Sbjct: 85 IKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIR 144
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPKN++E + +F
Sbjct: 145 SLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSLPKNITEESIKDMF 204
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGK 166
S+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK
Sbjct: 205 SVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGK 248
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++A A
Sbjct: 182 DQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYA 241
Query: 73 VNACHNK 79
+++ + K
Sbjct: 242 ISSLNGK 248
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
KLFIG +PKN E ++ +F +G + ++ I+R K AF+K + +A A+ +
Sbjct: 86 KLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIRS 145
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
+N + ++ L VK+A E
Sbjct: 146 LNNQRTLDQQLGSLQVKYASGE 167
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LFI +P+ + +++L F+ FG V + DK T + K FV S + A N
Sbjct: 82 PVSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADN 141
Query: 400 AIAMMNG-----CQLGGKKLK 415
AI +N QLG ++K
Sbjct: 142 AIRSLNNQRTLDQQLGSLQVK 162
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+G A LFI +P+ ++ + + F +G V + D +TG+ K FV + A
Sbjct: 179 SGVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQA 238
Query: 398 QNAIAMMNG 406
AI+ +NG
Sbjct: 239 LYAISSLNG 247
>gi|308456493|ref|XP_003090683.1| CRE-ETR-1 protein [Caenorhabditis remanei]
gi|308261154|gb|EFP05107.1| CRE-ETR-1 protein [Caenorhabditis remanei]
Length = 612
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Query: 19 VGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHN 78
+ Q+P+ E +F+ + V NI++DK+T+ S+GCCFV R++A +A A HN
Sbjct: 22 IFQIPRQWNEVDCRRLFEAYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEAQGALHN 81
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS 138
K + G P+Q+K AD E R E KLFIG L K SE + +FS +G I+D +LR +
Sbjct: 82 IKVIDGMHHPVQMKPADTE-NRNERKLFIGQLSKKHSEENLREIFSKFGQIEDCSVLRDN 140
Query: 139 QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 141 DGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 192
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 81/118 (68%), Gaps = 11/118 (9%)
Query: 320 SVSPAVANSNPSTSSSGG---------TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVL 370
+ S AV + TS+SG GP GANLFIYH+PQ+FGD +L N F FG +L
Sbjct: 495 ATSAAVGVPSAVTSTSGAGQLIGNGDVRGPDGANLFIYHLPQDFGDTDLINTFAPFGVIL 554
Query: 371 SAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
SAKVF+DK T +SKC+GFVS+E+P SA NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 555 SAKVFIDKVTNLSKCYGFVSFENPQSATNAISAMNGFQIGSKRLKVQLKVD--RGHPY 610
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLF+GQ+ K +E L +F +F +++ ++++D + SRGC FV +R
Sbjct: 98 DTENRNER-KLFIGQLSKKHSEENLREIFSKFGQIEDCSVLRDNDGK-SRGCAFVTFTNR 155
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
A A H+ +T+ G S+PL VK+AD + ++
Sbjct: 156 SCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDK 189
>gi|340369729|ref|XP_003383400.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Amphimedon
queenslandica]
Length = 447
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 119/199 (59%), Gaps = 12/199 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+++KLFVGQ+PK E Q+ A+ +EF + E+NIIKDK R S+GC FV ++ A A
Sbjct: 15 DKIKLFVGQIPKEYDEEQIKALLEEFGPIHEINIIKDKEKR-SKGCAFVTYCLKESAVNA 73
Query: 73 VNACHNKKTLPGASSPLQVKYAD------GELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
H K+TLP + P+QVK A GE + +LF+G L +S+ +V+ LFS +
Sbjct: 74 QQNLHEKRTLPAMNHPMQVKPATQSNRDKGE----DRRLFVGQLSPEMSDEQVANLFSPF 129
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G ++D+ ILR SK AF++ ++ +A+ A++ ++ + G S P+ VK ADTE+E
Sbjct: 130 GLVEDVSILRDKDGVSKKAAFVRMGSRNEAMTAIQGLHQSCTLPGVSHPVNVKIADTERE 189
Query: 187 RQARRAQKAQSQANNLPNA 205
++ +R Q Q N P+A
Sbjct: 190 KEMKRFHH-QVQVNQPPSA 207
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 67/90 (74%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+P + D +L N F FG+V+SAKVF+DK T +SKCFGFVS+E+ + Q
Sbjct: 357 GPEGGNLFIYHLPNDIKDSDLANMFSQFGKVISAKVFLDKHTNLSKCFGFVSFETSQAGQ 416
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR + NKPY
Sbjct: 417 AAIQAMNGFQIGTKRLKVQLKRPKEANKPY 446
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ + E+R +LFVGQ+ M++ Q+ +F F LV++V+I++DK S+ FV
Sbjct: 96 TQSNRDKGEDR-RLFVGQLSPEMSDEQVANLFSPFGLVEDVSILRDKDG-VSKKAAFVRM 153
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE----RLEHKLFIGMLP 111
SR EA A+ H TLPG S P+ VK AD E E R H++ + P
Sbjct: 154 GSRNEAMTAIQGLHQSCTLPGVSHPVNVKIADTEREKEMKRFHHQVQVNQPP 205
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 313 PLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSA 372
P N P V PA T S+ G LF+ + E D+++ N F FG V
Sbjct: 84 PAMNHPMQVKPA-------TQSNRDKGE-DRRLFVGQLSPEMSDEQVANLFSPFGLVEDV 135
Query: 373 KVFVDKATGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLK 419
+ DK GVSK FV S A AI + C L G V +K
Sbjct: 136 SILRDK-DGVSKKAAFVRMGSRNEAMTAIQGLHQSCTLPGVSHPVNVK 182
>gi|270016806|gb|EFA13252.1| hypothetical protein TcasGA2_TC001522 [Tribolium castaneum]
Length = 307
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 151/319 (47%), Gaps = 80/319 (25%)
Query: 170 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 229
+G+S LVVK+ADTEKERQ RR Q+ A N+ + + FGA Y Y
Sbjct: 9 KGASSSLVVKFADTEKERQLRRMQQ---MAGNMSLLNPFVFNQFGA--------YGAYAQ 57
Query: 230 QA---------------SGSY----GLMQYRLPPMQNQPGFHGIIPPVNQ-------GNA 263
+ G+Y + ++P + ++PP + G
Sbjct: 58 HSLDFQQQAALMAAATAQGTYINPMAALATQIPHATLNGMANSVVPPTSDVGVGAGSGQP 117
Query: 264 MRGASPDLSS------NMG-------------------PRNYAMP---PSGFVGSGYPAV 295
+ GA P L S NM P+ Y P P+G + A
Sbjct: 118 VNGAIPSLPSPTMPTFNMAAQTPNGQPGGTEAVYTNGIPQTYPAPQGLPNGEAALQHAAY 177
Query: 296 PGLQYPMPYPG----GMLGHRP--LNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYH 349
PG+Q PYPG + G P + +V+PA +GP G NLFIYH
Sbjct: 178 PGMQ---PYPGVAYPAVYGQFPQAIPQPMSAVAPA------QREGCSISGPEGCNLFIYH 228
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+
Sbjct: 229 LPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI 288
Query: 410 GGKKLKVQLKRDNKQNKPY 428
G K+LKVQLKR N+PY
Sbjct: 289 GMKRLKVQLKRPKDANRPY 307
>gi|62088448|dbj|BAD92671.1| BRUNO-like 6 RNA-binding protein variant [Homo sapiens]
Length = 305
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 158/339 (46%), Gaps = 56/339 (16%)
Query: 110 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF-LKYETKEQALAALEAINGKHK 168
LP E S L+ + + + ++TS C+ L ++ L A
Sbjct: 3 LPVRAEERTESCLWGCWASSR-------VRRTSDACSSPLATSRSARSCGVLTA-----P 50
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
++G+S LVVK ADT++ER RR Q+ HP+ LP+G Y
Sbjct: 51 VKGASSSLVVKLADTDRERALRRMQQMAGHLGAF------HPA---PLPLGACGAY---- 97
Query: 229 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFV 288
+ + Q L PG + Q + S + + PP
Sbjct: 98 ---TTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPP---- 150
Query: 289 GSGYPAVPGLQYPMPYPGGMLGHRPL----NNSPGS-------VSPAVANS----NPSTS 333
GSG +PGL P P G+ G PL N PGS +SP A S +P
Sbjct: 151 GSGPGTLPGL----PAPIGVNGFGPLTPQTNGQPGSDTLYNNGLSPYPAQSPGVADPLQQ 206
Query: 334 SSGG----TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 389
+ G GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFV
Sbjct: 207 AYAGMHHYAGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 266
Query: 390 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
S+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 267 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 305
>gi|310689905|pdb|3NMR|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
gi|310689907|pdb|3NNA|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
Length = 175
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A
Sbjct: 4 IKXFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 63
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q K AD E + KLFIG + K +E ++ FS +G I+
Sbjct: 64 QNALHNXKVLPGXHHPIQXKPADSEKNNAVEDRKLFIGXISKKCTENDIRVXFSSFGQIE 123
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ +ILRG S+GCAF+ + T+ A A++A + EG S P VVK+AD
Sbjct: 124 ECRILRGPDGLSRGCAFVTFTTRAXAQTAIKAXHQAQTXEGCSSPXVVKFAD 175
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 5 KXFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 64
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ K AD+EK
Sbjct: 65 NALHNXKVLPGXHHPIQXKPADSEK 89
>gi|294868388|ref|XP_002765513.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239865556|gb|EEQ98230.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 403
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 187/400 (46%), Gaps = 67/400 (16%)
Query: 41 VDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++EV I+KD+ T+ SRG FV E A+ A N LP ++ PL V YA GE ER
Sbjct: 43 IEEVFIMKDRETQESRGLAFVRFRDLAEGQNAIAAL-NGAILPESARPLTVIYAQGEAER 101
Query: 101 L------------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFL 148
L E KL++ L + E+ +F +G + ++ + G AF+
Sbjct: 102 LGLTKETPGMRSEETKLYVAGLGPSTEAVELRKIFEPFGRVTEVHVP-GPHAL---YAFV 157
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQ 208
++ ++ A+ A+ +NG+ ++EGS L VK AD R R
Sbjct: 158 RFAEEKDAMRAISDVNGRVQVEGSQRMLEVKVADPSSSRGPTRR---------------- 201
Query: 209 HPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGAS 268
P G PP + YG A Y P +Q P F + ++QG AS
Sbjct: 202 --------PSGSLPPVSSYGSPAGNGYD----HTPSVQ--PRF---VSGMSQGYGQ--AS 242
Query: 269 PDLSSNMGPRNYAMPPSGFVGSG--YPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVA 326
L+S M S +G+ Y A+ G Y H +N+ P +
Sbjct: 243 VPLNSTMAGDTQGQC-SRTIGAWTEYFAMDGTPYY---------HNSQSNTVQWELP-IE 291
Query: 327 NSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 386
NPS + +G +GP GAN+FI+ +P + + +L F +FG ++SAKV VDK TG+S+ +
Sbjct: 292 FKNPSAAHTG-SGPAGANIFIFSVPDAWTEMDLRQHFGSFGNIVSAKVVVDKQTGISRGY 350
Query: 387 GFVSYESPASAQNAIAMMNGCQL-GGKKLKVQLKRDNKQN 425
GF+SY++ SA+ A+ M+G G+K+KVQ+K+ N
Sbjct: 351 GFISYDNCDSAERAVQTMDGYMAPTGRKIKVQIKKGEGSN 390
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+F+ VP TE L F F + ++ DK T SRG F+ + A++AV
Sbjct: 309 IFIFSVPDAWTEMDLRQHFGSFGNIVSAKVVVDKQTGISRGYGFISYDNCDSAERAVQTM 368
Query: 77 HNKKTLPGASSPLQVKYADG 96
G +Q+K +G
Sbjct: 369 DGYMAPTGRKIKVQIKKGEG 388
>gi|221060510|ref|XP_002260900.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193810974|emb|CAQ42872.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 497
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV VPK++TE + ++F+E+ + +V IKDK +R FV S A KA+
Sbjct: 74 IKLFVSSVPKNLTENDIKSIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQ 133
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK L PL VK+A GELE+ E KLF+G LPK ++E ++ LF+
Sbjct: 134 DLHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLPKEIAEEQIRNLFN 193
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +E + P+ V++A+T+
Sbjct: 194 RYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIENAEKPIEVRFAETK 253
Query: 185 KERQARR 191
+ Q ++
Sbjct: 254 NQLQEKQ 260
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++ SA
Sbjct: 383 SGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNVDSA 442
Query: 398 QNAIAMMNG 406
NA+ MNG
Sbjct: 443 INAVKYMNG 451
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
++E KLFVG +PK + E Q+ +F + V EV I+K+ + S+ C FV +++
Sbjct: 167 ANENEAKLFVGSLPKEIAEEQIRNLFNRYGNVTEVYIMKN-SNGVSKRCAFVNYAYKEQG 225
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF 106
A+ + K + A P++V++A+ + + E +L
Sbjct: 226 IFAIQNLNGKIAIENAEKPIEVRFAETKNQLQEKQLL 262
>gi|403255513|ref|XP_003920470.1| PREDICTED: CUGBP Elav-like family member 1 [Saimiri boliviensis
boliviensis]
Length = 597
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 104/161 (64%), Gaps = 3/161 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 180 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 239
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 240 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 299
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
++ +ILRG S+GCAF+ + T+ A A++A++ ME
Sbjct: 300 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTME 340
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 486 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 545
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 546 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 597
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 183 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 242
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKERQARR 191
A++ + G P+ +K AD+EK R
Sbjct: 243 NALHNMKVLPGMHHPIQMKPADSEKNNVEDR 273
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 260 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 317
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL 101
V +R A A+ A H +T+ LQ + G L L
Sbjct: 318 VTFTTRAMAQTAIKAMHQAQTMELYLQLLQQTASSGNLNTL 358
>gi|255548387|ref|XP_002515250.1| RNA binding protein, putative [Ricinus communis]
gi|223545730|gb|EEF47234.1| RNA binding protein, putative [Ricinus communis]
Length = 564
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 111/176 (63%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV VP T + +F+ + EV + +D+ + +G CFV + +EAD+A+
Sbjct: 132 VKLFVAPVPIPTTIENICPLFEAHGSIVEVILPRDRRSGQQQGYCFVKYATIEEADRAIR 191
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A + + T+PG PL+V+YAD E ERL KL++G + K S+ E+ +FS YG ++D
Sbjct: 192 ALNGQYTIPGEVHPLKVRYADRERERLCKVVDKLYVGCINKQASKQEIEEIFSPYGHVED 251
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I+R + + S+GCAF+K +++A+AA++A++G M G PL+VK+AD +K R
Sbjct: 252 VYIVRDNLKQSRGCAFVKLPDRDKAVAAIKALHGTFTMRGCDQPLIVKFADPKKRR 307
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETK 153
D L+ KLF+ +P + + LF +G+I ++ + R + +G F+KY T
Sbjct: 124 DHNLDAASVKLFVAPVPIPTTIENICPLFEAHGSIVEVILPRDRRSGQQQGYCFVKYATI 183
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
E+A A+ A+NG++ + G PL V++AD E+ER + K
Sbjct: 184 EEADRAIRALNGQYTIPGEVHPLKVRYADRERERLCKVVDK 224
>gi|294873439|ref|XP_002766628.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239867660|gb|EEQ99345.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 372
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 179/403 (44%), Gaps = 70/403 (17%)
Query: 41 VDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+DEV I+KD+ T+ SRG FV E A+ A N TLP ++ PL V YA GE ER
Sbjct: 10 IDEVFIMKDRETQESRGLAFVRFRDLAEGQNAIAAL-NGTTLPESARPLTVIYAQGEAER 68
Query: 101 L------------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFL 148
L + KL++ L + E+ +F +G + ++ + AF+
Sbjct: 69 LGLTKETPGMRSEDTKLYVAGLGPSTEAVELRKIFEPFGRVTEVHV----PGPHALYAFV 124
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQ 208
++ ++ A+ A+ +NG+ ++EGS L VK AD R R
Sbjct: 125 RFAEEKDAMRAISDVNGRVQVEGSQRMLEVKVADPSSSRGPTRR---------------- 168
Query: 209 HPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQN--QPGFHGIIPPVNQGNAMRG 266
P G PP + YG A Y P N G+ P+N + M G
Sbjct: 169 --------PSGSLPPVSSYGSPAGNGYDHTPSVQPRFVNGMSQGYGQASTPLN--STMAG 218
Query: 267 ASP-DLSSNMGPRN--YAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSP 323
+ S +G +AM + + + + PM + +P
Sbjct: 219 DTQGQCSRTIGAWTEYFAMDGTPYYHNSQSNTVQWELPMEFK----------------NP 262
Query: 324 AVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVS 383
+ A++ P GP GAN+FI+ +P + + +L F FG ++SAKV VDK TG+S
Sbjct: 263 SAAHTVPQAK-----GPAGANIFIFSVPDAWTEMDLRQHFGLFGNIVSAKVVVDKQTGIS 317
Query: 384 KCFGFVSYESPASAQNAIAMMNGCQL-GGKKLKVQLKRDNKQN 425
+ +GF+SY++ SA+ A+ M+G G+K+KVQ+K+ N
Sbjct: 318 RGYGFISYDNCDSAERAVQTMDGYMAPTGRKIKVQIKKGEGSN 360
>gi|294936191|ref|XP_002781649.1| Nuclear polyadenylated RNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
gi|239892571|gb|EER13444.1| Nuclear polyadenylated RNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
Length = 451
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 183/432 (42%), Gaps = 61/432 (14%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTT-RASRGCCFVICPSRQEADKAV 73
V+LFVG++P E + +F+ + V EV +I+ K + GC FV + EA A+
Sbjct: 9 VRLFVGRLPATWQEQNIRDLFEAYGEVQEVGMIRPKDNGKQQTGCAFVKFGAVHEAATAI 68
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFS 124
+ + +QV++A+GE ERL KLF+G +P + ++ E+ +F
Sbjct: 69 KSLNGTYKADDVCGFIQVQFANGEPERLGLPEDTEGYSQKLFVGNIPPSTTDEELKRIFD 128
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + + L + + AF++Y K A+ A+EA+N K+ G P+ VK ADT
Sbjct: 129 EYGNVTEAYGLESKRASGNKAAFVRYSKKSDAVKAIEALNEKYTFPGEPHPITVKCADTR 188
Query: 185 KERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPP 244
++R A + + + + S+ P G M P G G G Q R
Sbjct: 189 EQRLAHKQEVDSHRFQGGGDRPSRTPDQGGFDRM----PQMGGGSLRGG----FQSRAGG 240
Query: 245 MQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPY 304
Q P + P R A P Y P G Q+ +P+
Sbjct: 241 YQPPPPPPATVQP-------RRAGPWTE-------YLNHPDGRYYYHNSQTGRTQWEVPF 286
Query: 305 PGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPG---------------ANLFIYH 349
M SP+ G GPPG AN+F+Y+
Sbjct: 287 EMNM-------------SPSGQQPRRPQQQHGKNGPPGGRTLLWKPRSFEWFSANVFVYN 333
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG-CQ 408
IP ++ + +L F G + + K+ VD T +SK +GFVS+ SA A+ M+G
Sbjct: 334 IPADWREGDLAREFGNCGSISTTKIIVDNVTNLSKGYGFVSFNDVPSAVAAVRNMDGFAT 393
Query: 409 LGGKKLKVQLKR 420
GK+L+VQ+K+
Sbjct: 394 HTGKRLQVQIKK 405
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQ 155
R+ +LF+G LP E + LF YG ++++ ++R G QQT GCAF+K+ +
Sbjct: 6 RIPVRLFVGRLPATWQEQNIRDLFEAYGEVQEVGMIRPKDNGKQQT--GCAFVKFGAVHE 63
Query: 156 ALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
A A++++NG +K + + V++A+ E ER
Sbjct: 64 AATAIKSLNGTYKADDVCGFIQVQFANGEPER 95
>gi|410911840|ref|XP_003969398.1| PREDICTED: CUGBP Elav-like family member 3-like [Takifugu rubripes]
Length = 458
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 97/142 (68%), Gaps = 1/142 (0%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R+ A A NA H +KTLPG + P+QVK AD E R + KLF+GML K ++
Sbjct: 55 GCAFLTYCARESALIAQNALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTD 113
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
A+V +F +G+I++ +LRG TSKGCAF+KY++ +A AA+ A++G + G+S L
Sbjct: 114 ADVRKMFEPFGSIEECTVLRGPDGTSKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSL 173
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+AD+EKER RR Q+ SQ
Sbjct: 174 VVKFADSEKERSLRRMQQVASQ 195
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ
Sbjct: 369 GPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQ 428
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 429 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 458
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+A + MF+ F ++E +++ D T S+GC FV S EA A+
Sbjct: 101 KLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGT---SKGCAFVKYQSNAEAQAAI 157
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
+A H +TLPGASS L VK+AD E ER
Sbjct: 158 SALHGSRTLPGASSSLVVKFADSEKER 184
>gi|84999108|ref|XP_954275.1| ribonucleoprotein [Theileria annulata]
gi|65305273|emb|CAI73598.1| ribonucleoprotein, putative [Theileria annulata]
Length = 515
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 114/180 (63%), Gaps = 13/180 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV ++PK E+ L +F+EF +V +V +I+DKT+ A + C FV S +AD AV
Sbjct: 117 IKLFVARIPKTHEESDLRRLFEEFGVVKDVIVIRDKTSNAHKNCAFVKMASICQADAAVR 176
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+N++ + + +Q++YA GE+ERL E KLF+G LPK+++E ++S+L
Sbjct: 177 RLNNQRVIDSSLGAVQIRYATGEVERLGFTQMAGEPGVDEAKLFVGSLPKSLTEEDLSSL 236
Query: 123 FSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F +G ++ +L+ + +KGC F+K + KEQAL A++ +NGK +EGS PL V++A
Sbjct: 237 FKEFGEAMEVFVLKDLACGGNKGCGFVKMKYKEQALHAIKELNGKKMLEGSVRPLEVRFA 296
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 59/86 (68%)
Query: 343 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 402
++LFI+HIP ++ + +L F FGRV+ A++ VD++T SK + FVSY++P SA A+A
Sbjct: 430 SSLFIFHIPPQWNNNDLFRTFSPFGRVVQARIAVDRSTNRSKGYAFVSYDNPESATQAVA 489
Query: 403 MMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG + GKKL+V K N ++ PY
Sbjct: 490 NMNGFTIMGKKLRVNYKTTNNRSNPY 515
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ KLFVG +PK +TE L ++FKEF EV ++KD ++GC FV +++A A
Sbjct: 215 DEAKLFVGSLPKSLTEEDLSSLFKEFGEAMEVFVLKDLACGGNKGCGFVKMKYKEQALHA 274
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + KK L G+ PL+V++A
Sbjct: 275 IKELNGKKMLEGSVRPLEVRFA 296
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
+E KLF+ +PK E+++ LF +G +KD+ ++R + K CAF+K + QA AA
Sbjct: 115 VEIKLFVARIPKTHEESDLRRLFEEFGVVKDVIVIRDKTSNAHKNCAFVKMASICQADAA 174
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKER 187
+ +N + ++ S + +++A E ER
Sbjct: 175 VRRLNNQRVIDSSLGAVQIRYATGEVER 202
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 332 TSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 391
T +G G A LF+ +P+ +++L + F+ FG + V D A G +K GFV
Sbjct: 206 TQMAGEPGVDEAKLFVGSLPKSLTEEDLSSLFKEFGEAMEVFVLKDLACGGNKGCGFVKM 265
Query: 392 ESPASAQNAIAMMNGCQL 409
+ A +AI +NG ++
Sbjct: 266 KYKEQALHAIKELNGKKM 283
>gi|395729854|ref|XP_002810281.2| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 3
[Pongo abelii]
Length = 478
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 122/240 (50%), Gaps = 54/240 (22%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCA------------------------FLKYE------------TKEQA 156
+LRG TSKGCA L++E + QA
Sbjct: 125 TVLRGPDGTSKGCASFEILGFYHRHCKCSNLVFILLTLVLRFEAHHEDWGVGAGVVRGQA 184
Query: 157 L-------AALEAINGKH-----------KMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+ L A+ + + +G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 185 MPWGWNGNQVLRALGRRDPDPAPLTCVWARAQGASSSLVVKFADTEKERGLRRMQQVATQ 244
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%)
Query: 374 VFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+FVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 424 IFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 478
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|449460564|ref|XP_004148015.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
gi|449522952|ref|XP_004168489.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
Length = 307
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 104/170 (61%), Gaps = 4/170 (2%)
Query: 22 VPKHMTE--AQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNK 79
VP H E + +F+ + E+ I++DK T +G CFV + EAD+A+ A N+
Sbjct: 3 VPFHKFEWNVSIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQ 62
Query: 80 KTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
T PG +P+ VKYAD E +RL KL++G L KN ++ E+ +FS YG ++D+ I+R
Sbjct: 63 YTFPGELTPINVKYADSEKDRLGVLEKLYVGCLNKNTTKREIEEVFSPYGFVEDIYIIRD 122
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ S+G AF+KY ++ ALAA++A+NG M G PL+V+ AD +K R
Sbjct: 123 DLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPR 172
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+S+K++ E KL+VG + K+ T+ ++ +F + V+++ II+D + SRG FV
Sbjct: 77 ADSEKDRLGVLE--KLYVGCLNKNTTKREIEEVFSPYGFVEDIYIIRDD-LKQSRGSAFV 133
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL 101
R A A+ A + T+ G PL V+ AD + R+
Sbjct: 134 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRI 173
>gi|83273948|ref|XP_729621.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23487965|gb|EAA21186.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana-related
[Plasmodium yoelii yoelii]
Length = 507
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 112/187 (59%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV +PK++TE + +F+E+ +V IKDK A+R FV S A KA+
Sbjct: 78 VKLFVSSIPKNLTEDDIKLIFEEYGATKDVVFIKDKKPNANRANVFVRMESIYFAQKAIE 137
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK + + PL VK+A GELE+ E KLF+G LPK++++ ++ +F+
Sbjct: 138 DLHGKKIICESLGPLIVKFAIGELEKYGINMNNANENEAKLFVGSLPKDITDDQIRNIFN 197
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG +K++ I++ S SK CAF+ Y+ KEQ + A++ +NGK +E + P+ V++A ++
Sbjct: 198 RYGNVKEVYIMKNSNGVSKRCAFVNYDYKEQGIFAVQNLNGKIAIENAEKPIEVRFAQSK 257
Query: 185 KERQARR 191
+ Q R+
Sbjct: 258 NQLQERQ 264
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++ SA
Sbjct: 393 SGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAYIATEKDTGRNRGFAFVSYDNVDSA 452
Query: 398 QNAIAMMNG 406
NA+ MNG
Sbjct: 453 INAVKYMNG 461
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK +T+ Q+ +F + V EV I+K+ + S+ C FV +++ AV
Sbjct: 177 KLFVGSLPKDITDDQIRNIFNRYGNVKEVYIMKN-SNGVSKRCAFVNYDYKEQGIFAVQN 235
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLF 106
+ K + A P++V++A + + E +L
Sbjct: 236 LNGKIAIENAEKPIEVRFAQSKNQLQERQLL 266
>gi|389585865|dbj|GAB68595.1| RNA binding protein, partial [Plasmodium cynomolgi strain B]
Length = 508
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV +PK +TE + +F+E+ + +V IKDK +R FV S A KA+
Sbjct: 85 IKLFVSSIPKSLTENDIKTIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQ 144
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK L PL VK+A GELE+ E KLF+G LPK ++E ++ LF+
Sbjct: 145 DLHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLPKEIAEEQIRNLFN 204
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +E + P+ V++A+T+
Sbjct: 205 RYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIENAEKPIEVRFAETK 264
Query: 185 KERQARR 191
+ Q ++
Sbjct: 265 NQLQEKQ 271
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++ SA
Sbjct: 394 SGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNVDSA 453
Query: 398 QNAIAMMNG 406
NA+ MNG
Sbjct: 454 INAVKYMNG 462
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
++E KLFVG +PK + E Q+ +F + V EV I+K+ + S+ C FV +++
Sbjct: 178 ANENEAKLFVGSLPKEIAEEQIRNLFNRYGNVTEVYIMKN-SNGVSKRCAFVNYAYKEQG 236
Query: 70 DKAVNACHNKKTLPGASSPLQVKYAD 95
A+ + K + A P++V++A+
Sbjct: 237 IFAIQNLNGKIAIENAEKPIEVRFAE 262
>gi|68069003|ref|XP_676412.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496097|emb|CAH95360.1| conserved hypothetical protein [Plasmodium berghei]
Length = 506
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 112/187 (59%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV +PK++TE + +F+E+ +V IKDK A+R FV S A KA+
Sbjct: 78 VKLFVSSIPKNLTEDDIKLIFEEYGATKDVVFIKDKKPNANRANVFVRMESIYFAQKAIE 137
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK + + PL VK+A GELE+ E KLF+G LPK++++ ++ +F+
Sbjct: 138 DLHGKKIICESLGPLIVKFAIGELEKYGINMNNANENEAKLFVGSLPKDITDDQIRNIFN 197
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG +K++ I++ S SK CAF+ Y+ KEQ + A++ +NGK +E + P+ V++A ++
Sbjct: 198 RYGNVKEVYIMKNSNGVSKRCAFVNYDYKEQGIFAVQNLNGKIAIENAEKPIEVRFAQSK 257
Query: 185 KERQARR 191
+ Q R+
Sbjct: 258 NQLQERQ 264
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++ SA
Sbjct: 392 VGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAYIATEKDTGRNRGFAFVSYDNVDSA 451
Query: 398 QNAIAMMNG 406
NA+ MNG
Sbjct: 452 INAVKYMNG 460
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK +T+ Q+ +F + V EV I+K+ + S+ C FV +++ AV
Sbjct: 177 KLFVGSLPKDITDDQIRNIFNRYGNVKEVYIMKN-SNGVSKRCAFVNYDYKEQGIFAVQN 235
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGML 110
+ K + A P++V++A + + E +L +L
Sbjct: 236 LNGKIAIENAEKPIEVRFAQSKNQLQERQLLNRVL 270
>gi|359323408|ref|XP_854054.3| PREDICTED: CUGBP, Elav-like family member 6 [Canis lupus
familiaris]
Length = 413
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 100/159 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 169
+ +LR TSKGCAF+K+ ++ +A AA+++++G M
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTM 200
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 324 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 383
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 384 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 413
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
KLF+G +P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ + + G + P+ VK A +E + R+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGRGEDRK 135
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 48 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 107
>gi|343961815|dbj|BAK62495.1| CUG triplet repeat RNA-binding protein 1 [Pan troglodytes]
Length = 483
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 372 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 431
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 432 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|395815677|ref|XP_003781351.1| PREDICTED: CUGBP Elav-like family member 1 [Otolemur garnettii]
Length = 510
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 399 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 458
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 459 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 510
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|350580113|ref|XP_003122868.3| PREDICTED: CUGBP, Elav-like family member 1, partial [Sus scrofa]
Length = 337
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 226 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 285
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 286 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 337
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 145 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 1 CAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 47
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
C FV +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 1 CAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 48
>gi|291384970|ref|XP_002709144.1| PREDICTED: CUG triplet repeat, RNA-binding protein 1-like
[Oryctolagus cuniculus]
Length = 483
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 372 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 431
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 432 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|38570081|ref|NP_941989.1| CUGBP Elav-like family member 1 isoform 2 [Homo sapiens]
gi|332259916|ref|XP_003279030.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|402893568|ref|XP_003909964.1| PREDICTED: CUGBP Elav-like family member 1 isoform 2 [Papio anubis]
gi|8745537|gb|AAF78956.1|AF267534_1 CUG-binding protein A isoform [Homo sapiens]
gi|21411010|gb|AAH31079.1| CUG triplet repeat, RNA binding protein 1 [Homo sapiens]
gi|119588317|gb|EAW67911.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_f [Homo
sapiens]
gi|123994083|gb|ABM84643.1| CUG triplet repeat, RNA binding protein 1 [synthetic construct]
Length = 483
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 372 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 431
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 432 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 483
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|410045110|ref|XP_003313076.2| PREDICTED: CUGBP Elav-like family member 1 [Pan troglodytes]
Length = 461
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 350 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 409
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 410 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 461
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 4/136 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKG 144
I++ +ILRG S+G
Sbjct: 161 IEECRILRGPDGLSRG 176
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEK 128
>gi|297697028|ref|XP_002825676.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 6
[Pongo abelii]
Length = 466
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 99/159 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 169
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTM 200
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 377 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 436
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 437 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 466
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ + + G + P+ VK A +E + R+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGRGEDRK 135
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ +Q+L F+ FGR+ V D+ TG+ K F++Y +S AQ+A+
Sbjct: 48 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 107
>gi|297275765|ref|XP_002801068.1| PREDICTED: CUGBP Elav-like family member 5-like [Macaca mulatta]
Length = 473
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 139/305 (45%), Gaps = 66/305 (21%)
Query: 170 EGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG- 228
+G+S LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 189 QGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYAQ 237
Query: 229 ---------YQASGSY---------------------GLMQYRL--------PPMQNQPG 250
SGSY GL + PP+
Sbjct: 238 ALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTA 297
Query: 251 FHGIIPPVNQGNA----MRGASPDLSSNM--GPRNYAMPPSGFVGSGYPAVPGLQ-YPMP 303
G++ P+ G A G P L + G Y + +PA G+Q Y
Sbjct: 298 VPGLVAPITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAM 357
Query: 304 YPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAF 363
YP + P+ +S V P GP G NLFIYH+PQEFGD EL F
Sbjct: 358 YPTAAI--TPIAHS-------VPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMF 408
Query: 364 QAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 423
FG ++S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR
Sbjct: 409 LPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKD 468
Query: 424 QNKPY 428
PY
Sbjct: 469 PGHPY 473
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEA 117
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 16 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSEE 75
Query: 118 EVSALFSIYGTIKDLQILRGSQQTSKG 144
+V LF +G I + +LRG +SKG
Sbjct: 76 DVLRLFQPFGVIDECTVLRGPDGSSKG 102
>gi|426368243|ref|XP_004051120.1| PREDICTED: CUGBP Elav-like family member 1 [Gorilla gorilla
gorilla]
Length = 551
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 440 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 499
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 500 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 551
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 45/181 (24%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 124 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 183
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+A NA HN K LPG P+Q+K AD E KN
Sbjct: 184 EAQNALHNMKVLPGMHHPIQMKPADSE--------------KN----------------- 212
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +
Sbjct: 213 ------------NGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 260
Query: 191 R 191
R
Sbjct: 261 R 261
>gi|95007487|emb|CAJ20709.1| RNA binding protein, putative [Toxoplasma gondii RH]
gi|221480877|gb|EEE19298.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221501598|gb|EEE27368.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 475
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 112/186 (60%), Gaps = 13/186 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+ M +A L +F+EF V E II+DK T + F+ S AD A+
Sbjct: 37 IKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIR 96
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ + L + P+ VKYA GE E+L + KLFIG +P+ ++E EV
Sbjct: 97 GLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPGQDQAKLFIGSIPRTMTEEEVRQF 156
Query: 123 FSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH EG + P+ V++A
Sbjct: 157 FSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHTFEGCTRPVEVRFA 216
Query: 182 DTEKER 187
+++ R
Sbjct: 217 ESKAAR 222
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%)
Query: 334 SSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 393
SS GPPGAN+F++H+P E+ +L F FG V+SA+V D+ TG ++ F FVSY++
Sbjct: 336 SSNAEGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDN 395
Query: 394 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 424
SA A+ MNG GGK+LKV +K+ +Q
Sbjct: 396 VESAATAVNNMNGFMAGGKRLKVSVKKGEEQ 426
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+++ KLF+G +P+ MTE ++ F + V+EV ++KD +GCCFV ++EA
Sbjct: 134 QDQAKLFIGSIPRTMTEEEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
AV K T G + P++V++A+ + R
Sbjct: 194 AVRTLSGKHTFEGCTRPVEVRFAESKAAR 222
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALA 158
R+E KLF+G +P+++ +A + +F +G +K+ I+R + K AF+K ++ A A
Sbjct: 34 RVEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADA 93
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKER 187
A+ +N +E S P+ VK+A E E+
Sbjct: 94 AIRGLNSTRILEQSMGPITVKYATGEAEK 122
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV VP T L+ F F V + D+TT +RG FV S + A A
Sbjct: 347 IFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFV---SYDNVESAATAV 403
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL 105
+N L+V GE + ++H L
Sbjct: 404 NNMNGFMAGGKRLKVSVKKGEEQYVQHLL 432
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LF+ +PQ D L F+ FG V A + DKATG K F+ +S A+A AI +
Sbjct: 39 LFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIRGL 98
Query: 405 NGCQL 409
N ++
Sbjct: 99 NSTRI 103
>gi|432862983|ref|XP_004069969.1| PREDICTED: CUGBP Elav-like family member 2-like [Oryzias latipes]
Length = 462
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 365 SIAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVS 424
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 425 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 462
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E ++ MF F ++E I++ + SRGC F
Sbjct: 124 MKPADSEKTTAVEDRKLFIGMVSKKYGENEVRMMFSSFGQIEECRILRGPDGQ-SRGCAF 182
Query: 61 VICPSRQEADKAVNACHNKKTL 82
V +R A A+ H+ +T+
Sbjct: 183 VTFATRAMAQNAIKTMHHSQTM 204
>gi|237844787|ref|XP_002371691.1| CELF family protein, putative [Toxoplasma gondii ME49]
gi|211969355|gb|EEB04551.1| CELF family protein, putative [Toxoplasma gondii ME49]
Length = 475
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 112/186 (60%), Gaps = 13/186 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+ M +A L +F+EF V E II+DK T + F+ S AD A+
Sbjct: 37 IKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIR 96
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ + L + P+ VKYA GE E+L + KLFIG +P+ ++E EV
Sbjct: 97 GLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPGQDQAKLFIGSIPRTMTEDEVRQF 156
Query: 123 FSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH EG + P+ V++A
Sbjct: 157 FSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHTFEGCTRPVEVRFA 216
Query: 182 DTEKER 187
+++ R
Sbjct: 217 ESKAAR 222
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%)
Query: 334 SSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 393
SS GPPGAN+F++H+P E+ +L F FG V+SA+V D+ TG ++ F FVSY++
Sbjct: 336 SSNAEGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDN 395
Query: 394 PASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 424
SA A+ MNG GGK+LKV +K+ +Q
Sbjct: 396 VESAATAVNNMNGFMAGGKRLKVSVKKGEEQ 426
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+++ KLF+G +P+ MTE ++ F + V+EV ++KD +GCCFV ++EA
Sbjct: 134 QDQAKLFIGSIPRTMTEDEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
AV K T G + P++V++A+ + R
Sbjct: 194 AVRTLSGKHTFEGCTRPVEVRFAESKAAR 222
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALA 158
R+E KLF+G +P+++ +A + +F +G +K+ I+R + K AF+K ++ A A
Sbjct: 34 RVEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADA 93
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKER 187
A+ +N +E S P+ VK+A E E+
Sbjct: 94 AIRGLNSTRILEQSMGPITVKYATGEAEK 122
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV VP T L+ F F V + D+TT +RG FV S + A A
Sbjct: 347 IFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFV---SYDNVESAATAV 403
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL 105
+N L+V GE + ++H L
Sbjct: 404 NNMNGFMAGGKRLKVSVKKGEEQYVQHLL 432
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LF+ +PQ D L F+ FG V A + DKATG K F+ +S A+A AI +
Sbjct: 39 LFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIRGL 98
Query: 405 NGCQL 409
N ++
Sbjct: 99 NSTRI 103
>gi|12642586|gb|AAK00297.1|AF314172_1 BRUNOL2 [Mus musculus]
Length = 436
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 325 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 384
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 385 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 436
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
Query: 55 SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPK 112
S+GCCFV +R+ A +A NA HN K LPG P+Q+K AD E + KLFIGM+ K
Sbjct: 7 SKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISK 66
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
+E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG
Sbjct: 67 KCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGC 126
Query: 173 SVPLVVKWADTEKERQARR 191
S P+VVK+ADT+K+++ +R
Sbjct: 127 SSPMVVKFADTQKDKEQKR 145
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 43 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAF 101
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 102 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 146
>gi|74148402|dbj|BAE36341.1| unnamed protein product [Mus musculus]
Length = 238
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 149 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 208
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 209 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 238
>gi|156102324|ref|XP_001616855.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148805729|gb|EDL47128.1| RNA binding protein, putative [Plasmodium vivax]
Length = 507
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 10/186 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFV +PK +TE + +F+E+ + +V IKDK +R FV S A KA+
Sbjct: 87 KLFVSSIPKSLTENDIKTIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQD 146
Query: 76 CHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFSI 125
H KK L PL VK+A GELE+ E KLF+G LPK ++E ++ LF+
Sbjct: 147 LHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLPKEIAEEQIRNLFNR 206
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +E + P+ V++A+T+
Sbjct: 207 YGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIENAEKPIEVRFAETKN 266
Query: 186 ERQARR 191
+ Q ++
Sbjct: 267 QLQEKQ 272
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP GAN+FI+HIP E+ +L AF FG ++SA + +K TG ++ F FVSY++ SA
Sbjct: 393 SGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNVDSA 452
Query: 398 QNAIAMMNG 406
NA+ MNG
Sbjct: 453 INAVKYMNG 461
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
++E KLFVG +PK + E Q+ +F + V EV I+K+ + S+ C FV +++
Sbjct: 179 ANENEAKLFVGSLPKEIAEEQIRNLFNRYGNVTEVYIMKN-SNGVSKRCAFVNYAYKEQG 237
Query: 70 DKAVNACHNKKTLPGASSPLQVKYAD 95
A+ + K + A P++V++A+
Sbjct: 238 IFAIQNLNGKIAIENAEKPIEVRFAE 263
>gi|194380292|dbj|BAG63913.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 191 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 250
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 251 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 280
>gi|156083038|ref|XP_001609003.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis T2Bo]
gi|154796253|gb|EDO05435.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis]
Length = 420
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 12/185 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV ++PK EA++ MF+EF V +V II+DK T A + C FV S +AD A+
Sbjct: 24 IKLFVARIPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFVRMVSISQADAAIK 83
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+N + A + VKYA GE ERL + KLF+G +PKN E + +
Sbjct: 84 RLNNNCVVDTALGAVLVKYASGETERLGFTSLVGEPGVNDAKLFVGSIPKNAEEDLIREI 143
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F YGT++D+ I++ KGCAF+K KEQ L A+ +++G ++EG P+ V++A+
Sbjct: 144 FGPYGTLEDIFIMKDQNGAGKGCAFVKMAYKEQGLYAIRSLDGMKQLEGCPRPMEVRFAE 203
Query: 183 TEKER 187
++ +
Sbjct: 204 SKANK 208
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 67/100 (67%)
Query: 328 SNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 387
N ++S+ GPPGANLFI+HIP E+ +L + F FG++LS+++ D++TG K +
Sbjct: 272 DNAASSAQVPAGPPGANLFIFHIPNEWTHHDLVHTFSQFGKILSSRIASDRSTGRHKGYA 331
Query: 388 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKP 427
FVSY++P SA AI +NG + GK+LKV +K+ ++ P
Sbjct: 332 FVSYDTPESAAQAIQHLNGFTVLGKRLKVTIKKGDESTVP 371
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
+E KLF+ +PK EAE+ +F +G +KD+ I+R + K CAF++ + QA AA
Sbjct: 22 VEIKLFVARIPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFVRMVSISQADAA 81
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKER 187
++ +N ++ + ++VK+A E ER
Sbjct: 82 IKRLNNNCVVDTALGAVLVKYASGETER 109
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ + + E+ F+ FG V + DKAT KC FV S + A
Sbjct: 21 PVEIKLFVARIPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFVRMVSISQADA 80
Query: 400 AIAMMN 405
AI +N
Sbjct: 81 AIKRLN 86
>gi|9581852|gb|AAF89096.1|AF169013_1 RNA binding protein NAPOR-3, partial [Rattus norvegicus]
Length = 226
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 137 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 196
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 197 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 226
>gi|194386824|dbj|BAG59778.1| unnamed protein product [Homo sapiens]
Length = 314
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 225 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 284
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 285 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 314
>gi|350589633|ref|XP_003482886.1| PREDICTED: CUGBP Elav-like family member 2-like [Sus scrofa]
Length = 270
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 181 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 240
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 241 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 270
>gi|194380550|dbj|BAG58428.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 314 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 373
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 374 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 403
>gi|431917652|gb|ELK16917.1| CUG-BP- and ETR-3-like factor 2 [Pteropus alecto]
Length = 443
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 346 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 405
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 406 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 443
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 45/178 (25%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+A NA HN KTLPG P+Q+K AD E
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSE--------------------------------- 100
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
S GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 101 ----------KSNGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 148
>gi|449502234|ref|XP_002199924.2| PREDICTED: CUGBP Elav-like family member 1 [Taeniopygia guttata]
Length = 485
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 396 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 455
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 456 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|60302694|ref|NP_001012539.1| CUGBP Elav-like family member 1 [Gallus gallus]
gi|60098733|emb|CAH65197.1| hypothetical protein RCJMB04_7f23 [Gallus gallus]
Length = 485
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 396 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 455
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 456 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 485
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|358414907|ref|XP_003582947.1| PREDICTED: CUGBP Elav-like family member 2-like [Bos taurus]
Length = 398
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 309 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 368
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 369 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 398
>gi|387015318|gb|AFJ49778.1| CUGBP Elav-like family member 1-like [Crotalus adamanteus]
Length = 511
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 422 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 481
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 482 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 511
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 224
>gi|355562286|gb|EHH18880.1| hypothetical protein EGK_19447, partial [Macaca mulatta]
gi|355782632|gb|EHH64553.1| hypothetical protein EGM_17798, partial [Macaca fascicularis]
Length = 433
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 344 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 403
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 404 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 433
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
Query: 55 SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPK 112
S GCCFV +R+ A +A NA HN KTLPG P+Q+K AD E + KLFIGM+ K
Sbjct: 1 SVGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 60
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
+E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG
Sbjct: 61 KCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGC 120
Query: 173 SVPLVVKWADTEKERQ 188
S P+VVK+ADT+K+++
Sbjct: 121 SSPIVVKFADTQKDKE 136
>gi|334348392|ref|XP_001367508.2| PREDICTED: CUGBP Elav-like family member 2-like [Monodelphis
domestica]
Length = 575
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 331 STSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVS 390
S + S GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVS
Sbjct: 478 SAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVS 537
Query: 391 YESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Y++P SAQ AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 538 YDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 575
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 87/133 (65%), Gaps = 2/133 (1%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVS 115
CCFV +R+ A +A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +
Sbjct: 146 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN 205
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++ ++ MEG S P
Sbjct: 206 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKTMHQSQTMEGCSSP 265
Query: 176 LVVKWADTEKERQ 188
+VVK+ADT+K+++
Sbjct: 266 IVVKFADTQKDKE 278
>gi|242022170|ref|XP_002431514.1| hypothetical protein Phum_PHUM533900 [Pediculus humanus corporis]
gi|212516808|gb|EEB18776.1| hypothetical protein Phum_PHUM533900 [Pediculus humanus corporis]
Length = 599
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 3/102 (2%)
Query: 330 PSTSSSGGT---GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 386
PS +S G GP GANLFIYH+PQEF D +L F +FG V+SAKVF+DK T +SKCF
Sbjct: 498 PSITSGAGKQIEGPDGANLFIYHLPQEFSDADLATTFHSFGNVISAKVFIDKMTNLSKCF 557
Query: 387 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
GFVSY++ SAQ+AI MNG Q+G K+LKVQLKR + ++PY
Sbjct: 558 GFVSYDNVLSAQSAIQAMNGFQIGTKRLKVQLKRSKEASRPY 599
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E++V LFS YG I++ +LR + T + CAF+ Y +K+ A+ A++A++
Sbjct: 1 MLAKKCTESDVRNLFSPYGNIEECTVLRDT--TGQSCAFVTYASKQSAINAIKAMHHSQT 58
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
M+G S LVVK+ADT+KE+ +R Q+ Q+ NL
Sbjct: 59 MDGCSSALVVKFADTQKEKDQKRLQQMQANLWNL 92
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE+ + +F + ++E +++D T + C FV S+Q A A+ A H+ +T
Sbjct: 2 LAKKCTESDVRNLFSPYGNIEECTVLRDTT---GQSCAFVTYASKQSAINAIKAMHHSQT 58
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SS L VK+AD + E+ + +L
Sbjct: 59 MDGCSSALVVKFADTQKEKDQKRL 82
>gi|124808251|ref|XP_001348269.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23497160|gb|AAN36708.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 514
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 10/186 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV +PK++TE + ++F+E+ + +V IKDK +R FV S KA+
Sbjct: 54 IKLFVSSIPKNLTEEDIKSIFQEYGNIQDVVFIKDKKPNVNRSNVFVRMESIFYGQKAIK 113
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H K+TL PL VK+A GELE+ E KLF+G LPK ++E E+ LF+
Sbjct: 114 DLHGKRTLCETLGPLIVKFAIGELEKYGVNMNNANENEAKLFVGSLPKEITEEELRELFN 173
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK E + P+ V++A+T+
Sbjct: 174 RYGNVTEVYIMKNSNGISKRCAFVNYAYKEQGIFAIQNMNGKIATENAEKPIEVRFAETK 233
Query: 185 KERQAR 190
+ Q +
Sbjct: 234 NQLQEK 239
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
TGP GAN+FI+HIP E+ +L +AF FG ++SA + ++ TG ++ F FVSY++ SA
Sbjct: 400 TGPVGANIFIFHIPNEWIQTDLLSAFSPFGNIISAHIATERDTGRNRGFAFVSYDNVDSA 459
Query: 398 QNAIAMMNG 406
NA+ MNG
Sbjct: 460 INAVKYMNG 468
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK +TE +L +F + V EV I+K+ + S+ C FV +++ A+
Sbjct: 153 KLFVGSLPKEITEEELRELFNRYGNVTEVYIMKN-SNGISKRCAFVNYAYKEQGIFAIQN 211
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLF 106
+ K A P++V++A+ + + E LF
Sbjct: 212 MNGKIATENAEKPIEVRFAETKNQLQEKHLF 242
>gi|432089211|gb|ELK23234.1| CUGBP Elav-like family member 2 [Myotis davidii]
Length = 331
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 242 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 301
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 302 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 331
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
M+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++
Sbjct: 1 MVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQ 188
MEG S P+VVK+ADT+K+++
Sbjct: 61 MEGCSSPIVVKFADTQKDKE 80
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
V K E + MF F ++E I++ SRGC FV +R A A+ A H +T
Sbjct: 2 VSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAFVTFSTRAMAQNAIKAMHQSQT 60
Query: 82 LPGASSPLQVKYADGELER 100
+ G SSP+ VK+AD + ++
Sbjct: 61 MEGCSSPIVVKFADTQKDK 79
>gi|260787638|ref|XP_002588859.1| hypothetical protein BRAFLDRAFT_60030 [Branchiostoma floridae]
gi|229274030|gb|EEN44870.1| hypothetical protein BRAFLDRAFT_60030 [Branchiostoma floridae]
Length = 164
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 76/110 (69%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A A P GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+
Sbjct: 55 GQLSQAFAQHPPIMPQQQKEGPEGCNLFIYHLPQEFGDAELMQMFMPFGNVISAKVFVDR 114
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 115 ATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 164
>gi|397492762|ref|XP_003817289.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Pan paniscus]
gi|426331467|ref|XP_004026702.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Gorilla
gorilla gorilla]
Length = 417
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 92/142 (64%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA +A H +KTLPG + P+QVK AD E + KLF+GML K ++
Sbjct: 2 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTD 61
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S L
Sbjct: 62 EDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSL 121
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+ADTEKER RR Q+ +Q
Sbjct: 122 VVKFADTEKERGLRRMQQVATQ 143
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 328 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 387
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 388 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 417
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 40 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 96
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 97 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 132
>gi|289547602|ref|NP_001166119.1| CUGBP Elav-like family member 3 isoform 2 [Homo sapiens]
Length = 418
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 92/142 (64%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA +A H +KTLPG + P+QVK AD E + KLF+GML K ++
Sbjct: 2 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTD 61
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S L
Sbjct: 62 EDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSL 121
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+ADTEKER RR Q+ +Q
Sbjct: 122 VVKFADTEKERGLRRMQQVATQ 143
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 329 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 388
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 389 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 418
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 40 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 96
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 97 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 132
>gi|444509480|gb|ELV09276.1| CUGBP Elav-like family member 5, partial [Tupaia chinensis]
Length = 329
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 91/146 (62%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSE 60
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 61 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 120
Query: 177 VVKWADTEKERQARRAQKAQSQANNL 202
VVK+ADT+KER RR Q+ Q L
Sbjct: 121 VVKFADTDKERTLRRMQQMVGQLGIL 146
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 48 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 106
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 107 LHGSQTMPGASSSLVVKFADTDKERTLRRM 136
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 387 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
GFVS+++PASA+ AI MNG Q+G K+LKVQLKR PY
Sbjct: 288 GFVSFDNPASARAAIQAMNGFQVGAKRLKVQLKRPKDPGHPY 329
>gi|68072247|ref|XP_678037.1| RNA binding protein [Plasmodium berghei strain ANKA]
gi|56498375|emb|CAI00313.1| RNA binding protein, putative [Plasmodium berghei]
Length = 318
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 151/317 (47%), Gaps = 75/317 (23%)
Query: 112 KNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
KN++E + +FS+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +E
Sbjct: 1 KNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLE 60
Query: 171 GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQ 230
G + P+ V++A+ + +Q++
Sbjct: 61 GCNRPVEVRFAEPKSSKQSQS--------------------------------------- 81
Query: 231 ASGSYGLMQYRLPPMQNQPGFHGIIPPVNQG---NAMRGASPDLSSNMGPRNYAMPPSGF 287
Q + P+QN P HGI P + G N G + +++N PR + +
Sbjct: 82 --------QLGIQPIQNAP--HGISPQAHPGTPNNINYGNNFGVNNNY-PRQVGVWKEYY 130
Query: 288 VGSGYP-----AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSS-SGGTGPP 341
G G P Q+ MP L N+NP+ + S +GPP
Sbjct: 131 SGEGRPYYYNEQTNTTQWEMPKEFETL---------------FMNNNPNIHNLSDSSGPP 175
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
GANLFI+H+P E+ +L AF FG +LSA++ +K TG ++ F FVSYE+ SA AI
Sbjct: 176 GANLFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYENIESAAAAI 235
Query: 402 AMMNGCQLGGKKLKVQL 418
+ MNG KKLKV +
Sbjct: 236 SQMNGFMALNKKLKVTV 252
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K++TE + MF + V+EV I+KD +T +GC FV +++A A+++ + KKTL
Sbjct: 1 KNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLE 60
Query: 84 GASSPLQVKYAD 95
G + P++V++A+
Sbjct: 61 GCNRPVEVRFAE 72
>gi|432944122|ref|XP_004083333.1| PREDICTED: CUGBP Elav-like family member 2-like [Oryzias latipes]
Length = 578
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 489 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 548
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 549 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 578
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 137/275 (49%), Gaps = 57/275 (20%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 53 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 112
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 113 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 172
Query: 129 IKDLQILRGSQQTSKGC------------------------AFLK--------------- 149
I++ +ILRG S+G FL+
Sbjct: 173 IEECRILRGPDGLSRGRLQAALQVFARIHLAEVRPVGTLFPVFLRLSADSVCPHRPRLLL 232
Query: 150 -------YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
++T+ ++L A E + EG S P+VVK+ADT+K+++ RR Q+ +Q
Sbjct: 233 IQAFSPDFDTQMESLFADEIVG-----EGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQ 287
Query: 203 PNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
N+ + SL G G P Y QA+ S L
Sbjct: 288 LNSATTWGSLTGL--GGLTPQYLALLQQATSSGNL 320
>gi|357623706|gb|EHJ74750.1| hypothetical protein KGM_06214 [Danaus plexippus]
Length = 283
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 86/142 (60%), Gaps = 17/142 (11%)
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLF 346
F G YPAV G Q+P P P M P S+S GP G NLF
Sbjct: 159 FPGVAYPAVYG-QFPQPIPPPMSTIAPAQREGCSIS----------------GPEGCNLF 201
Query: 347 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 406
IYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI MNG
Sbjct: 202 IYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAIQAMNG 261
Query: 407 CQLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR N+PY
Sbjct: 262 FQIGMKRLKVQLKRPKDANRPY 283
>gi|71032751|ref|XP_766017.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352974|gb|EAN33734.1| RNA-binding protein, putative [Theileria parva]
Length = 539
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 118/202 (58%), Gaps = 24/202 (11%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV ++PK E+ L +F+EF V +V +I+DK T + + C FV S +AD AV
Sbjct: 137 IKLFVARIPKTYEESDLRRLFQEFGPVKDVIVIRDKVTNSHKNCAFVKMASICQADAAVR 196
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+N++ + + +Q++YA GE+ERL E KLF+G LPK+++E ++++L
Sbjct: 197 RLNNQRVIDSSLGAVQIRYATGEVERLGFTQMAGEPGMDEAKLFVGSLPKSLTEDDLASL 256
Query: 123 FSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F +G ++ +L+ + +KGC F+K + KEQAL A++ +NGK +EGS PL V++A
Sbjct: 257 FKDFGEPLEVFVLKDLTCGGNKGCGFVKMKYKEQALYAIKELNGKKMLEGSIRPLEVRFA 316
Query: 182 -----------DTEKERQARRA 192
D E R+ RA
Sbjct: 317 MNKTGVSGQAQDFESRRKRSRA 338
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 57/84 (67%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LFI+HIP ++ + +L F FGRV+ A++ +D++T SK + FVSY++P SA A+A M
Sbjct: 456 LFIFHIPPQWNNNDLFRTFSPFGRVVQARIAIDRSTNRSKGYAFVSYDNPESATQAVANM 515
Query: 405 NGCQLGGKKLKVQLKRDNKQNKPY 428
NG + GKKL+V K N ++ PY
Sbjct: 516 NGFTIMGKKLRVNYKTTNNRSNPY 539
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ KLFVG +PK +TE L ++FK+F EV ++KD T ++GC FV +++A A
Sbjct: 235 DEAKLFVGSLPKSLTEDDLASLFKDFGEPLEVFVLKDLTCGGNKGCGFVKMKYKEQALYA 294
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + KK L G+ PL+V++A
Sbjct: 295 IKELNGKKMLEGSIRPLEVRFA 316
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 332 TSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 391
T +G G A LF+ +P+ + +L + F+ FG L V D G +K GFV
Sbjct: 226 TQMAGEPGMDEAKLFVGSLPKSLTEDDLASLFKDFGEPLEVFVLKDLTCGGNKGCGFVKM 285
Query: 392 ESPASAQNAIAMMNGCQL 409
+ A AI +NG ++
Sbjct: 286 KYKEQALYAIKELNGKKM 303
>gi|19912828|dbj|BAB88676.1| Cs-ETR1 [Ciona savignyi]
Length = 116
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 80/111 (72%)
Query: 318 PGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVD 377
P S PA A +T++ GP G NLFIYH+PQEF D +L N FQ FG V+SAKVF+D
Sbjct: 6 PASQLPANAMLTSTTNAPQKEGPEGCNLFIYHLPQEFSDADLANVFQPFGNVISAKVFID 65
Query: 378 KATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+AT SKCFGFVS+++ S+Q AI MNG Q+G K+LKVQLKR +Q++PY
Sbjct: 66 RATNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY 116
>gi|62088108|dbj|BAD92501.1| trinucleotide repeat containing 4 variant [Homo sapiens]
Length = 441
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 92/142 (64%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA +A H +KTLPG + P+QVK AD E + KLF+GML K ++
Sbjct: 25 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTD 84
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S L
Sbjct: 85 EDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSL 144
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+ADTEKER RR Q+ +Q
Sbjct: 145 VVKFADTEKERGLRRMQQVATQ 166
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 352 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 411
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 412 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 441
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 63 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 119
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 120 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 155
>gi|432951266|ref|XP_004084778.1| PREDICTED: CUGBP Elav-like family member 1-like [Oryzias latipes]
Length = 393
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 77/103 (74%), Gaps = 2/103 (1%)
Query: 328 SNPSTSSSGG--TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC 385
S S S++G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKC
Sbjct: 291 SQQSVSAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFLPFGNVISAKVFIDKQTNLSKC 350
Query: 386 FGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FGFVSY++P S+Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 351 FGFVSYDNPVSSQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 393
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 36/48 (75%)
Query: 144 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
GCAF+ + ++ A AA+++++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 60 GCAFVTFTARQMAQAAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKR 107
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHK 104
GC FV +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + +
Sbjct: 60 GCAFVTFTARQMAQAAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKR 107
>gi|269785109|ref|NP_001161510.1| bruno-like protein [Saccoglossus kowalevskii]
gi|268053989|gb|ACY92481.1| bruno-like protein [Saccoglossus kowalevskii]
Length = 485
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 103/179 (57%), Gaps = 15/179 (8%)
Query: 264 MRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP-GL-QYP-----------MPYPGGMLG 310
M GA+P++ S P +Y M +G P P GL QYP Y G
Sbjct: 308 MNGATPNMLSPTIP-SYNMAAQTNGQNGEPVYPNGLHQYPAHSNQTGDPLQQAYTGMQQY 366
Query: 311 HRPLNNSPGSVSPAVAN-SNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRV 369
N+ G ++ A SN + + GP G NLFIYH+PQEFGD EL F FG V
Sbjct: 367 AATYPNAYGQLTQAFTQQSNVTMPTQQREGPEGCNLFIYHLPQEFGDAELMQMFMPFGNV 426
Query: 370 LSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+S+KVFVD+AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR NKPY
Sbjct: 427 ISSKVFVDRATNQSKCFGFVSFDNPASAQGAIQAMNGFQIGMKRLKVQLKRPKDANKPY 485
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K MTE + A+F+ F ++E I++ S+GC FV S+
Sbjct: 116 DSESRAEDRKLFVGMLNKQMTEDDVRAIFQPFGKIEECTILRGPDG-VSKGCAFVKFGSK 174
Query: 67 QEADKAVNACHNKKTLP-GASSPLQVKYADGELERLEHKL 105
QEA A+N + +TLP GASS + VK+AD E ER ++
Sbjct: 175 QEALAAINNINGSRTLPQGASSAIVVKFADTEKERQIRRM 214
>gi|158293699|ref|XP_315047.4| AGAP004950-PA [Anopheles gambiae str. PEST]
gi|157016572|gb|EAA10371.5| AGAP004950-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 93/151 (61%), Gaps = 9/151 (5%)
Query: 284 PSGFVGSGYPAVPGLQYPMPYPG----GMLGHRP--LNNSPGSVSPAVANSNPSTSSSGG 337
P+G + A PG+Q PYPG + G P + +V+PA
Sbjct: 207 PNGDAALPHAAYPGIQ---PYPGVAYPAVYGQFPQAIPQPIAAVAPAQREDMLMFPGCSI 263
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 264 SGPEGCNLFIYHLPQEFGDGELMQMFMPFGTVISSKVFIDRATNQSKCFGFVSFDNPASA 323
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 324 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 354
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ AS+GC FV S QEA A+ +
Sbjct: 4 KLFVGMLSKQQTEEDVRQLFNAFGTIEECTILRGPDG-ASKGCAFVKFTSHQEAQAAITS 62
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H +T+PGASS L VK+AD E ER
Sbjct: 63 LHGSQTMPGASSSLVVKFADTEKER 87
>gi|355677611|gb|AER96039.1| CUG triplet repeat, RNA binding protein 2 [Mustela putorius furo]
Length = 346
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 258 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 317
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKP 427
AI MNG Q+G K+LKVQLKR +KP
Sbjct: 318 AAIQAMNGFQIGMKRLKVQLKRSKNDSKP 346
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 145 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 6 CAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 49
>gi|426334349|ref|XP_004028716.1| PREDICTED: CUGBP Elav-like family member 1-like [Gorilla gorilla
gorilla]
Length = 104
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 15 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 74
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 75 AAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 104
>gi|351694709|gb|EHA97627.1| CUG-BP- and ETR-3-like factor 5, partial [Heterocephalus glaber]
Length = 300
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 101/172 (58%), Gaps = 12/172 (6%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQS 60
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 61 EEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 120
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
LVVK+ADT+KER RR Q+ Q L PSL ALP PY+ Y
Sbjct: 121 LVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--ALPFS---PYSAY 161
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 38 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 95
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 96 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 137
>gi|156368353|ref|XP_001627659.1| predicted protein [Nematostella vectensis]
gi|156214575|gb|EDO35559.1| predicted protein [Nematostella vectensis]
Length = 383
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L FQ FG V+SAKVF+DK T +SKCFGFVSY++ SAQ
Sbjct: 294 GPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQ 353
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
NAI MNG Q+G K+LKVQLKR N+PY
Sbjct: 354 NAIQHMNGFQIGAKRLKVQLKRPKDANRPY 383
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 23/156 (14%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ E L +F+ + + E+ I+KDK T +G + C + Q+
Sbjct: 20 VKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKG--WDACNAAQKH----- 72
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
H KKTLPG + KLF+GM+ K+ E ++ +FS +GTI++L +
Sbjct: 73 -LHEKKTLPGMD---------------DRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 116
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
LR + TSKGCAF+K+ + QA A+ ++ ME
Sbjct: 117 LRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTME 152
>gi|256052032|ref|XP_002569583.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350646169|emb|CCD59153.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 682
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 69/91 (75%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
TGP G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++ SA
Sbjct: 592 TGPEGCNLFIYHLPQEFGDNELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNHTSA 651
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
QNAI MNG Q+G K+LKVQLKR KPY
Sbjct: 652 QNAIQAMNGFQIGMKRLKVQLKRPKDSRKPY 682
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K+ +E ++ LF+ YG I++ ILR SKGCAF+K+ + +A A++
Sbjct: 99 DRKLFVGMLGKHQTEKDIQNLFAPYGLIEECTILRDQNGLSKGCAFVKFSSSTEAANAID 158
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN 200
++ M+G+S PLVVK+ADTEKERQ R+ Q QS N
Sbjct: 159 HMHNSQTMQGASSPLVVKFADTEKERQVRK-QHQQSTTN 196
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E KLFVG + KH TE + +F + L++E I++D+ S+GC FV S EA
Sbjct: 97 HEDRKLFVGMLGKHQTEKDIQNLFAPYGLIEECTILRDQN-GLSKGCAFVKFSSSTEAAN 155
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
A++ HN +T+ GASSPL VK+AD E ER
Sbjct: 156 AIDHMHNSQTMQGASSPLVVKFADTEKER 184
>gi|194389144|dbj|BAG61589.1| unnamed protein product [Homo sapiens]
Length = 145
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 91/137 (66%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +
Sbjct: 7 IKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQS 66
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI + +
Sbjct: 67 ALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTV 126
Query: 135 LRGSQQTSKGCAFLKYE 151
LRG TSKGCAF+K++
Sbjct: 127 LRGPDGTSKGCAFVKFQ 143
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ + + G + P+ VK AD+E + R+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGEDRK 96
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y +S
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 397 AQNAI 401
AQ+A+
Sbjct: 64 AQSAL 68
>gi|328776307|ref|XP_393833.4| PREDICTED: CUGBP Elav-like family member 4-like [Apis mellifera]
Length = 525
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 86/142 (60%), Gaps = 17/142 (11%)
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLF 346
+ G YPAV G Q+P P M P S+S GP G NLF
Sbjct: 401 YPGVAYPAVYG-QFPQAIPQPMTAVAPTQREGCSIS----------------GPEGCNLF 443
Query: 347 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 406
IYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG
Sbjct: 444 IYHLPQEFGDGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNG 503
Query: 407 CQLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR ++PY
Sbjct: 504 FQIGMKRLKVQLKRPKDASRPY 525
>gi|269868178|gb|ACZ52395.1| Bruno-3 transcript variant 5 [Drosophila pseudoobscura]
Length = 401
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 87/139 (62%), Gaps = 11/139 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG-TGPPGANLFIYH 349
G P PG+ +P Y P ++ P +A P+ +GP G NLFIYH
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREGCSISGPEGCNLFIYH 322
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+
Sbjct: 323 LPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI 382
Query: 410 GGKKLKVQLKRDNKQNKPY 428
G K+LKVQLKR ++PY
Sbjct: 383 GMKRLKVQLKRPKDASRPY 401
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868144|gb|ACZ52378.1| Bruno-3 transcript variant 5 [Drosophila pseudoobscura]
Length = 401
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 87/139 (62%), Gaps = 11/139 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG-TGPPGANLFIYH 349
G P PG+ +P Y P ++ P +A P+ +GP G NLFIYH
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREGCSISGPEGCNLFIYH 322
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+
Sbjct: 323 LPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI 382
Query: 410 GGKKLKVQLKRDNKQNKPY 428
G K+LKVQLKR ++PY
Sbjct: 383 GMKRLKVQLKRPKDASRPY 401
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|148695565|gb|EDL27512.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Mus
musculus]
Length = 478
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 75/109 (68%), Gaps = 6/109 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 331 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 390
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 425
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR N
Sbjct: 391 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDN 439
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 40/179 (22%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRS--------------------- 52
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+P Q K + + KLFIGM+ K +E ++ +FS +G I++
Sbjct: 53 -------------QNPPQSKAVE------DRKLFIGMISKKCTENDIRVMFSSFGQIEEC 93
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 94 RILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 152
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ K+ E+R KLF+G + K TE + MF F ++E I++ SRGC FV +R
Sbjct: 57 QSKAVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAFVTFTTR 114
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 115 TMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 153
>gi|403276014|ref|XP_003929712.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 368
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 279 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPASAQ 338
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 339 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 368
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 19 EDRKLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 78 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 110
>gi|350403945|ref|XP_003486959.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
4-like [Bombus impatiens]
Length = 522
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 86/142 (60%), Gaps = 17/142 (11%)
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLF 346
+ G YPAV G Q+P P M P S+S GP G NLF
Sbjct: 398 YPGVAYPAVYG-QFPQAIPQPMTAVAPTQREGCSIS----------------GPEGCNLF 440
Query: 347 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 406
IYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG
Sbjct: 441 IYHLPQEFGDGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNG 500
Query: 407 CQLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR ++PY
Sbjct: 501 FQIGMKRLKVQLKRPKDASRPY 522
>gi|149022604|gb|EDL79498.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 478
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 75/109 (68%), Gaps = 6/109 (5%)
Query: 323 PAVANSNPSTSSSGGT------GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFV 376
P + N N T S G GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+
Sbjct: 331 PTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFI 390
Query: 377 DKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQN 425
DK T +SKCFGFVSY++P SAQ AI MNG Q+G K+LKVQLKR N
Sbjct: 391 DKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDN 439
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 40/179 (22%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRS--------------------- 52
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+P Q K + + KLFIGM+ K +E ++ +FS +G I++
Sbjct: 53 -------------QNPPQSKAVE------DRKLFIGMISKKCTENDIRVMFSSFGQIEEC 93
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 94 RILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 152
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ K+ E+R KLF+G + K TE + MF F ++E I++ SRGC FV +R
Sbjct: 57 QSKAVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAFVTFTTR 114
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 115 TMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 153
>gi|156347048|ref|XP_001621619.1| hypothetical protein NEMVEDRAFT_v1g144256 [Nematostella vectensis]
gi|156207744|gb|EDO29519.1| predicted protein [Nematostella vectensis]
Length = 159
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L FQ FG V+SAKVF+DK T +SKCFGFVSY++ SAQ
Sbjct: 70 GPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQ 129
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
NAI MNG Q+G K+LKVQLKR N+PY
Sbjct: 130 NAIQHMNGFQIGAKRLKVQLKRPKDANRPY 159
>gi|344269048|ref|XP_003406367.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 1
[Loxodonta africana]
Length = 447
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 75/110 (68%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 338 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDR 397
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 398 ATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 447
>gi|241723820|ref|XP_002404307.1| conserved hypothetical protein [Ixodes scapularis]
gi|215505391|gb|EEC14885.1| conserved hypothetical protein [Ixodes scapularis]
Length = 284
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 195 GPEGCNLFIYHLPQEFGDAELMQMFMPFGNVISAKVFIDRATNQSKCFGFVSFDNPASAQ 254
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 255 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 284
>gi|269868188|gb|ACZ52400.1| Bruno-3 transcript variant 15 [Drosophila pseudoobscura]
Length = 370
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 87/139 (62%), Gaps = 11/139 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG-TGPPGANLFIYH 349
G P PG+ +P Y P ++ P +A P+ +GP G NLFIYH
Sbjct: 242 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREGCSISGPEGCNLFIYH 291
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+
Sbjct: 292 LPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI 351
Query: 410 GGKKLKVQLKRDNKQNKPY 428
G K+LKVQLKR ++PY
Sbjct: 352 GMKRLKVQLKRPKDASRPY 370
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 37 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 96
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 97 RRMQQMAGHMNLL 109
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 40 LVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE 99
L++ +K + GC FV ++QEA A+ H +T+PGASS L VKYAD E E
Sbjct: 34 LMNRALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKE 93
Query: 100 R 100
R
Sbjct: 94 R 94
>gi|334325385|ref|XP_001367310.2| PREDICTED: CUGBP Elav-like family member 4-like [Monodelphis
domestica]
Length = 460
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 75/110 (68%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 351 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDR 410
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 411 ATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 460
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 100 DSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSH 158
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 159 AEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 197
>gi|340725298|ref|XP_003401009.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 2 [Bombus
terrestris]
Length = 374
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 86/142 (60%), Gaps = 17/142 (11%)
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLF 346
+ G YPAV G Q+P P M P S+S GP G NLF
Sbjct: 250 YPGVAYPAVYG-QFPQAIPQPMTAVAPTQREGCSIS----------------GPEGCNLF 292
Query: 347 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 406
IYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG
Sbjct: 293 IYHLPQEFGDGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNG 352
Query: 407 CQLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR ++PY
Sbjct: 353 FQIGMKRLKVQLKRPKDASRPY 374
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ E KLFVG + K TE + +F F ++E I++ +SRGC FV S
Sbjct: 11 DSENRGEDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSH 69
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
QEA A+N H +T+PGASS L VK+AD E ER ++
Sbjct: 70 QEALAAINTLHGSQTMPGASSSLVVKFADTEKERQLRRM 108
>gi|340725302|ref|XP_003401011.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 4 [Bombus
terrestris]
Length = 360
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 86/142 (60%), Gaps = 17/142 (11%)
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLF 346
+ G YPAV G Q+P P M P S+S GP G NLF
Sbjct: 236 YPGVAYPAVYG-QFPQAIPQPMTAVAPTQREGCSIS----------------GPEGCNLF 278
Query: 347 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 406
IYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG
Sbjct: 279 IYHLPQEFGDGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNG 338
Query: 407 CQLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR ++PY
Sbjct: 339 FQIGMKRLKVQLKRPKDASRPY 360
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TE + +F F ++E I++ +SRGC FV S QEA A+N H +T+P
Sbjct: 4 KQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSHQEALAAINTLHGSQTMP 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
GASS L VK+AD E ER ++
Sbjct: 63 GASSSLVVKFADTEKERQLRRM 84
>gi|340725296|ref|XP_003401008.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 1 [Bombus
terrestris]
Length = 373
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 86/142 (60%), Gaps = 17/142 (11%)
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLF 346
+ G YPAV G Q+P P M P S+S GP G NLF
Sbjct: 249 YPGVAYPAVYG-QFPQAIPQPMTAVAPTQREGCSIS----------------GPEGCNLF 291
Query: 347 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 406
IYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG
Sbjct: 292 IYHLPQEFGDGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNG 351
Query: 407 CQLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR ++PY
Sbjct: 352 FQIGMKRLKVQLKRPKDASRPY 373
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ +SRGC FV S QEA A+N
Sbjct: 19 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSHQEALAAINT 77
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD E ER ++
Sbjct: 78 LHGSQTMPGASSSLVVKFADTEKERQLRRM 107
>gi|340725300|ref|XP_003401010.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 3 [Bombus
terrestris]
Length = 384
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 86/142 (60%), Gaps = 17/142 (11%)
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLF 346
+ G YPAV G Q+P P M P S+S GP G NLF
Sbjct: 260 YPGVAYPAVYG-QFPQAIPQPMTAVAPTQREGCSIS----------------GPEGCNLF 302
Query: 347 IYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNG 406
IYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG
Sbjct: 303 IYHLPQEFGDGELMQMFIPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNG 362
Query: 407 CQLGGKKLKVQLKRDNKQNKPY 428
Q+G K+LKVQLKR ++PY
Sbjct: 363 FQIGMKRLKVQLKRPKDASRPY 384
>gi|348583729|ref|XP_003477625.1| PREDICTED: CUGBP Elav-like family member 6-like [Cavia porcellus]
Length = 472
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 383 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 442
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 443 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 472
>gi|269868196|gb|ACZ52404.1| Bruno-3 transcript variant 19 [Drosophila pseudoobscura]
gi|269868198|gb|ACZ52405.1| Bruno-3 transcript variant 19 [Drosophila pseudoobscura]
Length = 356
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 87/139 (62%), Gaps = 11/139 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG-TGPPGANLFIYH 349
G P PG+ +P Y P ++ P +A P+ +GP G NLFIYH
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREGCSISGPEGCNLFIYH 277
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+
Sbjct: 278 LPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI 337
Query: 410 GGKKLKVQLKRDNKQNKPY 428
G K+LKVQLKR ++PY
Sbjct: 338 GMKRLKVQLKRPKDASRPY 356
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|363744095|ref|XP_003642971.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 496
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 75/110 (68%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 387 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDR 446
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 447 ATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 496
>gi|363744097|ref|XP_003642972.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 495
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 75/110 (68%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 386 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDR 445
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 446 ATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 495
>gi|349802871|gb|AEQ16908.1| putative cug triplet rna binding protein 2 [Pipa carvalhoi]
Length = 90
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GA+LFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 1 GPEGASLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQ 60
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 61 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 90
>gi|363744104|ref|XP_003642974.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 491
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 75/110 (68%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 382 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDR 441
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 442 ATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 491
>gi|157103910|ref|XP_001648180.1| deadenylation factor EDEN-BP, putative [Aedes aegypti]
gi|108880459|gb|EAT44684.1| AAEL003979-PA, partial [Aedes aegypti]
Length = 285
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Query: 284 PSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG-TGPPG 342
P+G + A PG+Q PYPG + P ++ +A P+ +GP G
Sbjct: 144 PNGDAALPHAAYPGIQ---PYPG-VAYPAVYGQFPQAIPQPIATIAPAQREGCSISGPEG 199
Query: 343 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIA 402
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 200 CNLFIYHLPQEFGDGELMQMFMPFGTVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQ 259
Query: 403 MMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR N+PY
Sbjct: 260 AMNGFQIGMKRLKVQLKRPKDANRPY 285
>gi|118103583|ref|XP_424495.2| PREDICTED: CUGBP, Elav-like family member 4 isoform 3 [Gallus
gallus]
Length = 492
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 75/110 (68%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 383 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDR 442
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 443 ATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 492
>gi|449514107|ref|XP_002187309.2| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Taeniopygia
guttata]
Length = 492
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 75/110 (68%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 383 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDR 442
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 443 ATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 492
>gi|269868315|gb|ACZ52462.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 87/140 (62%), Gaps = 7/140 (5%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSP--GSVSPAVANSNPSTSSSGGTGPPGANLFIY 348
G P PG+ +P Y G P P +V+P + +GP G NLFIY
Sbjct: 228 GLPPFPGVAFPAVY-----GQFPQALPPPLAAVAPTLREDFLMFPGCSISGPEGCNLFIY 282
Query: 349 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 408
H+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q
Sbjct: 283 HLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQ 342
Query: 409 LGGKKLKVQLKRDNKQNKPY 428
+G K+LKVQLKR ++PY
Sbjct: 343 IGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|118103585|ref|XP_001231286.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Gallus
gallus]
Length = 504
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 415 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQ 474
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 475 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 504
>gi|442761475|gb|JAA72896.1| Putative rna-binding protein etr-3 rrm superfamily, partial [Ixodes
ricinus]
Length = 129
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 69/91 (75%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
TGP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++ SA
Sbjct: 39 TGPEGANLFIYHLPQEFTDSDLAQTFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNSLSA 98
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 99 QAAIQAMNGFQIGTKRLKVQLKRSKDASKPY 129
>gi|195590112|ref|XP_002084791.1| GD12651 [Drosophila simulans]
gi|194196800|gb|EDX10376.1| GD12651 [Drosophila simulans]
Length = 616
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 483 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 529
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 530 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 589
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 590 QAMNGFQIGMKRLKVQLKRPKDASRPY 616
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 84 GASSPLQVK---YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
G S PL+ A + L+ KLF+GML K +E +V +F +GTI++ ILRG
Sbjct: 227 GESEPLETLGSIIAKDPFKHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG 286
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN 200
SKGCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N
Sbjct: 287 ASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMN 346
Query: 201 NL 202
L
Sbjct: 347 LL 348
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ AS+GC FV S+QEA A+
Sbjct: 250 KLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKFGSQQEAQSAITN 308
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H +T+PGASS L VKYAD E ER
Sbjct: 309 LHGSQTMPGASSSLVVKYADTEKER 333
>gi|327285608|ref|XP_003227525.1| PREDICTED: CUGBP Elav-like family member 3-like [Anolis
carolinensis]
Length = 236
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 147 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQ 206
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 207 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 236
>gi|321448797|gb|EFX61589.1| hypothetical protein DAPPUDRAFT_338859 [Daphnia pulex]
Length = 293
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 203 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 262
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 263 QAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 293
>gi|335292430|ref|XP_003356729.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 2 [Sus scrofa]
Length = 344
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 255 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 314
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 315 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 344
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ + H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQSLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|198463676|ref|XP_002135559.1| bruno-3 [Drosophila pseudoobscura pseudoobscura]
gi|198151365|gb|EDY74186.1| bruno-3 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 288 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 334
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 335 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 394
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 395 QAMNGFQIGMKRLKVQLKRPKDASRPY 421
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 100
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 101 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 139
>gi|345326922|ref|XP_003431097.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2
[Ornithorhynchus anatinus]
Length = 448
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 359 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQ 418
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 419 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 448
>gi|269868140|gb|ACZ52376.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 274 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 320
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 321 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 380
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 381 QAMNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|24663908|ref|NP_729923.1| bruno-3, isoform A [Drosophila melanogaster]
gi|194870535|ref|XP_001972671.1| GG13757 [Drosophila erecta]
gi|195327422|ref|XP_002030418.1| GM24582 [Drosophila sechellia]
gi|195494162|ref|XP_002094720.1| GE20053 [Drosophila yakuba]
gi|16648344|gb|AAL25437.1| LD31834p [Drosophila melanogaster]
gi|23093534|gb|AAF49798.2| bruno-3, isoform A [Drosophila melanogaster]
gi|190654454|gb|EDV51697.1| GG13757 [Drosophila erecta]
gi|194119361|gb|EDW41404.1| GM24582 [Drosophila sechellia]
gi|194180821|gb|EDW94432.1| GE20053 [Drosophila yakuba]
gi|220945994|gb|ACL85540.1| bru-3-PA [synthetic construct]
gi|220955812|gb|ACL90449.1| bru-3-PA [synthetic construct]
Length = 422
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 289 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 335
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 336 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 395
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 396 QAMNGFQIGMKRLKVQLKRPKDASRPY 422
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|344284431|ref|XP_003413971.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
6-like [Loxodonta africana]
Length = 499
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 410 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 469
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 470 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 499
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
SEE KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA
Sbjct: 149 DSEEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEA 207
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ H +T+ GASS L VK AD + ER ++
Sbjct: 208 QAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRM 243
>gi|449282137|gb|EMC89034.1| CUG-BP- and ETR-3-like factor 4, partial [Columba livia]
Length = 361
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 75/110 (68%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 252 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDR 311
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 312 ATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 361
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+
Sbjct: 8 DRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAIN 67
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 68 ALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 104
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA A
Sbjct: 7 EDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQAA 65
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 66 INALHGSQTMPGASSSLVVKFADTDKERTMRRM 98
>gi|410960910|ref|XP_003987030.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Felis catus]
Length = 443
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 354 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 413
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 414 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 443
>gi|410960908|ref|XP_003987029.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Felis catus]
Length = 344
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 255 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 314
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 315 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ + H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQSLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|432119145|gb|ELK38360.1| CUGBP Elav-like family member 6 [Myotis davidii]
Length = 416
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 327 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 386
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 387 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 416
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEAD 70
E KLFVG + K E + +F+ F ++E +++ D T S+GC FV S+ EA
Sbjct: 59 EDRKLFVGMLGKQQGEDDVRRLFQPFGHIEECTVLRSPDGT---SKGCAFVKFGSQGEAQ 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ + H +T+ GASS L VK AD + ER ++
Sbjct: 116 AAIQSLHGSRTMAGASSSLVVKLADTDRERALRRM 150
>gi|345326924|ref|XP_003431098.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3
[Ornithorhynchus anatinus]
Length = 447
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 358 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQ 417
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 418 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 447
>gi|194752425|ref|XP_001958523.1| GF10965 [Drosophila ananassae]
gi|190625805|gb|EDV41329.1| GF10965 [Drosophila ananassae]
Length = 422
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 289 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 335
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 336 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 395
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 396 QAMNGFQIGMKRLKVQLKRPKDASRPY 422
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|149638168|ref|XP_001508614.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1
[Ornithorhynchus anatinus]
Length = 446
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 357 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQ 416
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 417 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 446
>gi|301768673|ref|XP_002919757.1| PREDICTED: CUGBP Elav-like family member 6-like, partial
[Ailuropoda melanoleuca]
Length = 473
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 384 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 443
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 444 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 473
>gi|281340436|gb|EFB16020.1| hypothetical protein PANDA_008409 [Ailuropoda melanoleuca]
Length = 470
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 381 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 440
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 441 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 470
>gi|269868305|gb|ACZ52457.1| Bruno-3 transcript variant 4 [Drosophila persimilis]
Length = 407
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 274 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 320
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 321 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 380
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 381 QAMNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQAMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H + +PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQAMPGASSSLVVKYADTEKER 125
>gi|320545833|ref|NP_001189095.1| bruno-3, isoform H [Drosophila melanogaster]
gi|318069196|gb|ADV37531.1| bruno-3, isoform H [Drosophila melanogaster]
Length = 416
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 283 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 329
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 330 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 389
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 390 QAMNGFQIGMKRLKVQLKRPKDASRPY 416
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 148
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 149 SPYGAYAQL 157
>gi|329663834|ref|NP_001192573.1| CUGBP Elav-like family member 6 [Bos taurus]
gi|296483717|tpg|DAA25832.1| TPA: trinucleotide repeat containing 4 (predicted)-like [Bos
taurus]
Length = 480
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 391 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 450
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 451 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 480
>gi|311260847|ref|XP_003128555.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 1 [Sus scrofa]
Length = 480
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 391 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 450
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 451 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 480
>gi|269868138|gb|ACZ52375.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 274 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 320
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 321 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 380
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 381 QAMNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|320545827|ref|NP_001189092.1| bruno-3, isoform E [Drosophila melanogaster]
gi|318069193|gb|ADV37528.1| bruno-3, isoform E [Drosophila melanogaster]
Length = 408
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 275 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 321
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 322 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 381
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 382 QAMNGFQIGMKRLKVQLKRPKDASRPY 408
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 125
>gi|34194499|gb|AAH33838.1| BRUNOL6 protein [Homo sapiens]
Length = 368
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 279 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 338
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 339 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 368
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 19 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 78 IRGLHGSRTMAGASSSLVVKLADTDRERALRRM 110
>gi|296213628|ref|XP_002753353.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Callithrix
jacchus]
Length = 481
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 452 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|34526541|dbj|BAC85148.1| FLJ00324 protein [Homo sapiens]
Length = 376
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 287 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 346
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 347 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 376
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 27 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 85
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 86 IRGLHGSRTMAGASSSLVVKLADTDRERALRRM 118
>gi|395822449|ref|XP_003784530.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Otolemur
garnettii]
Length = 481
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 452 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|119598306|gb|EAW77900.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|193784955|dbj|BAG54108.1| unnamed protein product [Homo sapiens]
Length = 342
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 253 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 312
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 313 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 342
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+ ++G
Sbjct: 1 MLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQK 194
M G+S LVVK ADT++ER RR Q+
Sbjct: 61 MAGASSSLVVKLADTDRERALRRMQQ 86
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K E + +F+ F ++E +++ S+GC FV S+ EA A+ H +T+
Sbjct: 4 KQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAAIRGLHGSRTMA 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
GASS L VK AD + ER ++
Sbjct: 63 GASSSLVVKLADTDRERALRRM 84
>gi|269868160|gb|ACZ52386.1| Bruno-3 transcript variant 19 [Drosophila pseudoobscura]
Length = 356
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 86/139 (61%), Gaps = 11/139 (7%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG-TGPPGANLFIYH 349
G P PG+ +P Y P ++ P +A P+ +GP G NLFIYH
Sbjct: 228 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREGCSISGPEGCNLFIYH 277
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
+PQEFGD EL F FG V S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+
Sbjct: 278 LPQEFGDAELMQMFLPFGNVTSSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI 337
Query: 410 GGKKLKVQLKRDNKQNKPY 428
G K+LKVQLKR ++PY
Sbjct: 338 GMKRLKVQLKRPKDASRPY 356
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|397495530|ref|XP_003818605.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Pan paniscus]
Length = 481
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 452 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|351705755|gb|EHB08674.1| CUG-BP- and ETR-3-like factor 6, partial [Heterocephalus glaber]
Length = 393
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 304 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 363
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 364 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 393
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 45 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 103
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 104 IQGLHGSQTMAGASSSLVVKLADTDRERALRRM 136
>gi|70780381|ref|NP_443072.3| CUGBP Elav-like family member 6 isoform 1 [Homo sapiens]
gi|74760888|sp|Q96J87.1|CELF6_HUMAN RecName: Full=CUGBP Elav-like family member 6; Short=CELF-6;
AltName: Full=Bruno-like protein 6; AltName:
Full=CUG-BP- and ETR-3-like factor 6; AltName:
Full=RNA-binding protein BRUNOL-6
gi|15341327|gb|AAK95615.1|AF401233_1 BRUNO-like 6 RNA-binding protein [Homo sapiens]
gi|17046404|gb|AAL34513.1|AF425606_1 RNA-binding protein CELF6 [Homo sapiens]
gi|119598307|gb|EAW77901.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 481
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 452 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|345311730|ref|XP_001520496.2| PREDICTED: CUGBP Elav-like family member 5-like, partial
[Ornithorhynchus anatinus]
Length = 219
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 130 GPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQ 189
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N PY
Sbjct: 190 TAIQAMNGFQIGMKRLKVQLKRPKDANHPY 219
>gi|170592252|ref|XP_001900883.1| RNA recognition motif. [Brugia malayi]
gi|158591750|gb|EDP30354.1| RNA recognition motif [Brugia malayi]
Length = 487
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 81/108 (75%), Gaps = 6/108 (5%)
Query: 326 ANSNPST---SSSGG--TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKAT 380
A+S P+T ++SGG GP G NLFIYH+PQ+F D +L F FG ++SAKVF+DK T
Sbjct: 364 ASSTPNTGMNTTSGGQSKGPDGCNLFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDKQT 423
Query: 381 GVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+SKCFGFVSY++ SAQNAI+ +NG Q+G K+LKVQLKR K +KPY
Sbjct: 424 NLSKCFGFVSYDNVVSAQNAISALNGFQIGSKRLKVQLKR-GKDSKPY 470
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E + +F++F V ++N+++DK T+ SRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGETECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLFIGML K ++E +V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFIGMLNKKLTEDDVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSK 143
+L+ S+ S+
Sbjct: 139 TVLKDSEGKSR 149
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
K+F+G +P++ E E LF +G++ L +LR QTS+GC F+ Y + A+AA A
Sbjct: 23 KMFVGQIPRSWGETECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTYYKRADAIAAQAA 82
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQAR 190
++ + P+ +K AD E + +
Sbjct: 83 LHNIRVLPQMYHPVQMKPADIENRNERK 110
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 391
P +F+ IP+ +G+ E F+ FG V V DK T S+ FV+Y
Sbjct: 19 PDAIKMFVGQIPRSWGETECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTY 70
>gi|402874763|ref|XP_003901197.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Papio anubis]
gi|387542958|gb|AFJ72106.1| CUGBP Elav-like family member 6 isoform 1 [Macaca mulatta]
Length = 481
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 452 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|332236062|ref|XP_003267224.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Nomascus
leucogenys]
Length = 481
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 452 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|426379617|ref|XP_004056488.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Gorilla
gorilla gorilla]
Length = 481
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 452 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|442632161|ref|NP_001261807.1| bruno-3, isoform N [Drosophila melanogaster]
gi|442632163|ref|NP_001261808.1| bruno-3, isoform O [Drosophila melanogaster]
gi|440215743|gb|AGB94500.1| bruno-3, isoform N [Drosophila melanogaster]
gi|440215744|gb|AGB94501.1| bruno-3, isoform O [Drosophila melanogaster]
Length = 403
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 270 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 316
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 317 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 376
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 377 QAMNGFQIGMKRLKVQLKRPKDASRPY 403
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 20 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 79
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 80 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 135
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 25 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 83
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 84 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 120
>gi|302565316|ref|NP_001180884.1| CUGBP Elav-like family member 6 [Macaca mulatta]
Length = 481
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 452 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>gi|195171586|ref|XP_002026586.1| GL21647 [Drosophila persimilis]
gi|194111502|gb|EDW33545.1| GL21647 [Drosophila persimilis]
Length = 458
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 325 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 371
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 372 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 431
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 432 QAMNGFQIGMKRLKVQLKRPKDASRPY 458
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 169
V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G M
Sbjct: 71 VRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQTM 121
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGC 58
+ ++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC
Sbjct: 41 LKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGC 97
Query: 59 CFVICPSRQEADKAVNACHNKKTLP 83
FV ++QEA A+ H +T+P
Sbjct: 98 AFVKFGTQQEAQSAIANLHGSQTMP 122
>gi|269868150|gb|ACZ52381.1| Bruno-3 transcript variant 11 [Drosophila pseudoobscura]
Length = 376
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 243 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 289
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 290 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 349
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 350 QAMNGFQIGMKRLKVQLKRPKDASRPY 376
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 37 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 96
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 97 RRMQQMAGHMNLL 109
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 40 LVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE 99
L++ +K + GC FV ++QEA A+ H +T+PGASS L VKYAD E E
Sbjct: 34 LMNRALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKE 93
Query: 100 R 100
R
Sbjct: 94 R 94
>gi|269868303|gb|ACZ52456.1| Bruno-3 transcript variant 4 [Drosophila persimilis]
Length = 407
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 87/145 (60%), Gaps = 17/145 (11%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSS-------GGTGPPGA 343
G P PG+ +P Y P ++ P +A P+ +GP G
Sbjct: 273 GLPPFPGVAFPAVY----------RQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 344 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 403
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 404 MNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 383 MNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIVNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIVNLHGSQTMPGASSSLVVKYADTEKER 125
>gi|320545843|ref|NP_001189100.1| bruno-3, isoform M [Drosophila melanogaster]
gi|318069201|gb|ADV37536.1| bruno-3, isoform M [Drosophila melanogaster]
Length = 370
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 237 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 283
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 284 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 343
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 344 QAMNGFQIGMKRLKVQLKRPKDASRPY 370
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 80
>gi|2565067|gb|AAB91444.1| CAGH4 [Homo sapiens]
Length = 358
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 269 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 328
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 329 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 358
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 137 GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQ 196
G +KGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+
Sbjct: 22 GQMAPAKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVA 81
Query: 197 SQ 198
+Q
Sbjct: 82 TQ 83
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 55 SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++GC FV + EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 27 AKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 72
>gi|380800413|gb|AFE72082.1| CUGBP Elav-like family member 6 isoform 1, partial [Macaca mulatta]
Length = 245
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 156 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 215
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 216 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 245
>gi|119573805|gb|EAW53420.1| trinucleotide repeat containing 4, isoform CRA_b [Homo sapiens]
Length = 353
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 264 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 323
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 324 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 353
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 122 LFSIYGTIKDLQILRGSQQTSKG-CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+F +GTI + +LRG TSKG CAF+K++T +A AA+ ++ + G+S LVVK+
Sbjct: 1 MFEPFGTIDECTVLRGPDGTSKGSCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKF 60
Query: 181 ADTEKERQARRAQKAQSQ 198
ADTEKER RR Q+ +Q
Sbjct: 61 ADTEKERGLRRMQQVATQ 78
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 34 MFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQV 91
MF+ F +DE +++ D T++ S C FV + EA A+N H+ +TLPGASS L V
Sbjct: 1 MFEPFGTIDECTVLRGPDGTSKGS--CAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVV 58
Query: 92 KYADGELER 100
K+AD E ER
Sbjct: 59 KFADTEKER 67
>gi|338726567|ref|XP_001916316.2| PREDICTED: CUGBP Elav-like family member 5-like [Equus caballus]
Length = 505
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 95/152 (62%), Gaps = 20/152 (13%)
Query: 294 AVPGLQYPM--------PYPGGMLGHRPLNN--SPGSV-----SPAVANS-NPSTSSSGG 337
AVPGL P+ P+PGG H L + G V SP VA + +P+ S
Sbjct: 357 AVPGLVAPITNGFAGVVPFPGG---HPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQ 413
Query: 338 -TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 396
TGP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PAS
Sbjct: 414 YTGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPAS 473
Query: 397 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AQ AI MNG Q+G K+LKVQLKR PY
Sbjct: 474 AQTAIQAMNGFQVGMKRLKVQLKRPKDPGHPY 505
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 113
GC F+ +R A KA A H +KTLPG + P+QVK AD E L + PK+
Sbjct: 79 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGSCHLSVATGPKD 135
>gi|269868142|gb|ACZ52377.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 87/145 (60%), Gaps = 17/145 (11%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSS-------GGTGPPGA 343
G P PG+ +P Y P ++ P +A P+ +GP G
Sbjct: 273 GLPPFPGVAFPAVY----------GRFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGC 322
Query: 344 NLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAM 403
NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 323 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 382
Query: 404 MNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 383 MNGFQIGMKRLKVQLKRPKDASRPY 407
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868190|gb|ACZ52401.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 362
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 229 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 275
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 276 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 335
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 336 QAMNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIADLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIADLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868158|gb|ACZ52385.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 362
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 229 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 275
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 276 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 335
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 336 QAMNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAESESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAESESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868200|gb|ACZ52406.1| Bruno-3 transcript variant 20 [Drosophila pseudoobscura]
Length = 356
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 223 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 269
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 270 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 329
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 330 QAMNGFQIGMKRLKVQLKRPKDASRPY 356
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 140 QTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQA 199
++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 27 ESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHM 86
Query: 200 NNL 202
N L
Sbjct: 87 NLL 89
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 21 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 74
>gi|194385138|dbj|BAG60975.1| unnamed protein product [Homo sapiens]
Length = 260
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 171 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 230
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 231 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 260
>gi|45786151|gb|AAH68008.1| TNRC4 protein, partial [Homo sapiens]
Length = 407
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 318 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 377
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 378 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 407
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
R A KA +A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F
Sbjct: 1 RDSALKAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEP 59
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEK
Sbjct: 60 FGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEK 119
Query: 186 ERQARRAQKAQSQ 198
ER RR Q+ +Q
Sbjct: 120 ERGLRRMQQVATQ 132
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 38 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 94
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 95 NTLHSSRTLPGASSSLVVKFADTEKER 121
>gi|351714404|gb|EHB17323.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 195
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 102/163 (62%), Gaps = 4/163 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCC V +R+ A +A
Sbjct: 16 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRKAALEA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q+K AD E + KLFIGM+ + +E ++ +FS +G I+
Sbjct: 76 QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQIE 135
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 173
+ +ILRG S+GCAF+ + T+ A A++A++ ME S
Sbjct: 136 EYRILRGPDGLSRGCAFVTFTTRGMAQTAIKAMHQAQTMEVGS 178
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC + + T++ AL A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRKAALEAQ 76
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEK 101
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + + TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQIEEYRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLE 102
V +R A A+ A H +T+ S+ QVK GE+ LE
Sbjct: 153 VTFTTRGMAQTAIKAMHQAQTMEVGSA--QVK---GEITYLE 189
>gi|269868156|gb|ACZ52384.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
gi|269868192|gb|ACZ52402.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
gi|269868313|gb|ACZ52461.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 229 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 275
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 276 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 335
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 336 QAMNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868311|gb|ACZ52460.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 229 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 275
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 276 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 335
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 336 QAMNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|74149188|dbj|BAE22391.1| unnamed protein product [Mus musculus]
Length = 88
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 69/87 (79%)
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ AI
Sbjct: 2 GANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI 61
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR +KPY
Sbjct: 62 QSMNGFQIGMKRLKVQLKRSKNDSKPY 88
>gi|119573804|gb|EAW53419.1| trinucleotide repeat containing 4, isoform CRA_a [Homo sapiens]
Length = 388
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 299 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 358
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 359 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 388
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF
Sbjct: 4 PIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAF 62
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 63 VKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 113
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCF 60
+ K S KLFVG + K T+ + MF+ F +DE +++ D T S+GC F
Sbjct: 6 QVKPADSESRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAF 62
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V + EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 63 VKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 102
>gi|269868317|gb|ACZ52463.1| Bruno-3 transcript variant 17 [Drosophila persimilis]
Length = 362
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 229 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 275
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 276 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 335
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 336 QAMNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+AD EKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADAEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADAEKER 80
>gi|427786275|gb|JAA58589.1| Putative cugbp elav-like family member 1 [Rhipicephalus pulchellus]
Length = 219
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++ SAQ
Sbjct: 130 GPEGANLFIYHLPQEFTDSDLAQTFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNSLSAQ 189
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 190 AAIQAMNGFQIGTKRLKVQLKRSKDASKPY 219
>gi|28574919|ref|NP_524059.4| bruno-3, isoform B [Drosophila melanogaster]
gi|23093533|gb|AAF49799.2| bruno-3, isoform B [Drosophila melanogaster]
Length = 363
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 230 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 276
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 277 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 336
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 337 QAMNGFQIGMKRLKVQLKRPKDASRPY 363
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 80
>gi|47219454|emb|CAG10818.1| unnamed protein product [Tetraodon nigroviridis]
Length = 413
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ
Sbjct: 324 GPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQ 383
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 384 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 413
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 99/186 (53%), Gaps = 43/186 (23%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 8 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 67
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E
Sbjct: 68 QNALHEQKTLPGMNRPIQVKPADSE----------------------------------- 92
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
RG GCAF+KY++ +A AA+ ++G + G+S LVVK+AD+EKER RR
Sbjct: 93 --SRG------GCAFVKYQSNAEAQAAINTLHGSRTLPGASSSLVVKFADSEKERSLRRM 144
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 145 QQVASQ 150
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPAS 396
P LFI IP+ +++L F+ FG++ V DK TG+ K F++Y ES
Sbjct: 7 PDAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALK 66
Query: 397 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
AQNA+ L G +Q+K + +++
Sbjct: 67 AQNALHEQKT--LPGMNRPIQVKPADSESR 94
>gi|193204845|ref|NP_001022295.2| Protein ETR-1, isoform b [Caenorhabditis elegans]
gi|351063345|emb|CCD71500.1| Protein ETR-1, isoform b [Caenorhabditis elegans]
Length = 352
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +SKCFGFVSYE+ SA
Sbjct: 263 GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 322
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 323 NAISAMNGFQIGSKRLKVQLKVD--RGNPY 350
>gi|148664596|gb|EDK97012.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_c [Mus
musculus]
Length = 510
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 74/110 (67%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NL IYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 401 GQISQAFPQPPPMIPQQQREGPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDR 460
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 461 ATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 510
>gi|226371663|ref|NP_001139766.1| CUGBP Elav-like family member 4 isoform C [Mus musculus]
gi|27753638|gb|AAO22167.1| bruno-like 4 protein [Mus musculus]
Length = 495
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NL IYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 406 GPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQ 465
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 466 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 495
>gi|432881561|ref|XP_004073841.1| PREDICTED: CUGBP Elav-like family member 3-like [Oryzias latipes]
Length = 374
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++P+SAQ
Sbjct: 285 GPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQ 344
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 345 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 374
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 77/111 (69%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K ++A+V +F +G+I++ +LRG TSKGCAF
Sbjct: 4 PIQVKPADSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K+++ +A AA+ A++G + G+S LVVK+AD+EKER RR Q+ SQ
Sbjct: 64 VKFQSNAEAQAAINALHGSRTLPGASSSLVVKFADSEKERGLRRMQQVASQ 114
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+A + MF+ F ++E +++ D T S+GC FV
Sbjct: 11 DSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGT---SKGCAFVKFQ 67
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 68 SNAEAQAAINALHGSRTLPGASSSLVVKFADSEKER 103
>gi|66362598|ref|XP_628265.1| bruno-like protein with 2 RRM domains [Cryptosporidium parvum Iowa
II]
gi|46229739|gb|EAK90557.1| bruno-like protein with 2 RRM domains [Cryptosporidium parvum Iowa
II]
Length = 690
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 13/189 (6%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+K+ K VKLFV +VPKHMT +LL +F ++ LV E NII+D + +GC FV
Sbjct: 257 NKRRSKRGYAPVKLFVNRVPKHMTNEELLKIFNKYGLVVECNIIRD--SNGPKGCAFVRF 314
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPK 112
+ EA A+ H K L P+QVKYADGE+ERL K+F+G LPK
Sbjct: 315 SNIYEAQNAILCIHGKTVLDKEVGPIQVKYADGEIERLGLSPDVQPCGESVKVFVGSLPK 374
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
N +E ++ LF +G + ++ I+R + + SK AF+ + K A A+ ++ K+ + S
Sbjct: 375 NCTEDQLLLLFKQFGHVDEVHIIRDNNKQSKCSAFVTFPRKFMAENAIMFLDKKYIFDNS 434
Query: 173 SVPLVVKWA 181
P+ V+ A
Sbjct: 435 KRPIEVRLA 443
>gi|269868186|gb|ACZ52399.1| Bruno-3 transcript variant 14 [Drosophila pseudoobscura]
Length = 373
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 240 LPP--FPGVAFPAVYG-QFPQVLPPPLAAVAPTQREDFLMFPGCSIS----------GPE 286
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 287 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 346
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 347 RAMNGFQIGMKRLKVQLKRPKDASRPY 373
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 144 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 48 GCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 106
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 49 DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
++T GC FV ++QEA A+ H +T+PGASS L VKYAD E ER ++
Sbjct: 40 NRTRDPRGGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQM 99
Query: 109 MLPKNVSEAEVSALFSIYG 127
N+ VS FS YG
Sbjct: 100 AGHMNLLNPFVSNQFSPYG 118
>gi|226371659|ref|NP_001139764.1| CUGBP Elav-like family member 4 isoform A [Mus musculus]
gi|29387384|gb|AAH48405.1| Brunol4 protein [Mus musculus]
Length = 504
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 74/110 (67%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NL IYH+PQEFGD EL F FG V+S+KVFVD+
Sbjct: 395 GQISQAFPQPPPMIPQQQREGPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDR 454
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 455 ATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 504
>gi|148664598|gb|EDK97014.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_e [Mus
musculus]
Length = 501
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NL IYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 412 GPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQ 471
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 472 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 501
>gi|47215645|emb|CAG01362.1| unnamed protein product [Tetraodon nigroviridis]
Length = 264
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 175 GPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQ 234
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 235 AAIQAMNGFQIGMKRLKVQLKRPKDASRPY 264
>gi|427786277|gb|JAA58590.1| Putative cugbp elav-like family member 1 [Rhipicephalus pulchellus]
Length = 211
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++ SAQ
Sbjct: 122 GPEGANLFIYHLPQEFTDSDLAQTFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNSLSAQ 181
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 182 AAIQAMNGFQIGTKRLKVQLKRSKDASKPY 211
>gi|195020121|ref|XP_001985125.1| GH14684 [Drosophila grimshawi]
gi|195378885|ref|XP_002048212.1| GJ13842 [Drosophila virilis]
gi|193898607|gb|EDV97473.1| GH14684 [Drosophila grimshawi]
gi|194155370|gb|EDW70554.1| GJ13842 [Drosophila virilis]
Length = 421
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 89/147 (60%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 288 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 334
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 335 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAI 394
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 395 QAMNGFQIGMKRLKVQLKRPKDASRPY 421
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|440586603|emb|CCK33023.1| RRM domain protein Bruno, partial [Platynereis dumerilii]
Length = 154
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 65 GPDGANLFIYHLPQEFADHDLMQMFMPFGTVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 124
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR KPY
Sbjct: 125 AAIQAMNGFQIGMKRLKVQLKRPKSDAKPY 154
>gi|355701918|gb|EHH29271.1| CUGBP Elav-like family member 4, partial [Macaca mulatta]
Length = 409
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 38/198 (19%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK-------------- 95
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
+ P+QVK AD E + KLF+GML K SE +V
Sbjct: 96 --------------MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 141
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 142 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 201
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 202 ADTDKERTMRRMQQMAGQ 219
>gi|290985168|ref|XP_002675298.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
gi|284088893|gb|EFC42554.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
Length = 641
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 196/441 (44%), Gaps = 52/441 (11%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR-ASRGCCFVICPSRQEADKAVNA 75
+FV +P H ++ L +F F + +++ DKT +S G FV + EA A+
Sbjct: 124 VFVKYLPPHFSDEDLRELFTPFGEIVSCHVMTDKTRENSSLGFGFVRFSNENEAQDAIQG 183
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEH-KLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
N+K++ ++ + G E+ + LFI +P + E + F ++G I ++I
Sbjct: 184 L-NEKSIGNKRLLCKLSNSAGNKEKDQQSNLFIRNIPPHYDEETLKQAFEVFGPISKVKI 242
Query: 135 LRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS---VPLVVKWADTEKERQAR 190
+ + Q SK F K+E ++ AL+A++ +NG + SS +PLVV++A+TE E+Q R
Sbjct: 243 MIDINTQRSKCYGFCKFENRKDALSAIQKMNGSKLDDDSSKDILPLVVRFAETEHEKQKR 302
Query: 191 RAQKAQ--SQANNLPN--ADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQ 246
+ + Q ++PN S H + P G P Y + M R Q
Sbjct: 303 KLKTRQIIRPPTHVPNPYVHSHHTGF--SNPNGMNPSLYSYPM-----FNQMAMRRDDQQ 355
Query: 247 NQPG----FHGIIP-------------PVNQGNAMRGASPDLS----------SNMGPRN 279
++ +H +P PV+ R + L +N GP
Sbjct: 356 DETSQDMTYHSDVPYHMTYFVPHHMGVPVSSHPTDRFSKDKLENEKSNESDDQNNQGPFL 415
Query: 280 YAMPP--SGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG 337
+ P + + P P PM M ++ ++ S + + + + S SG
Sbjct: 416 HNFNPYYNPYFNPYTPYNPYYHVPMYDESSMNENQEQTHTKRSKNESSSPED-KNSKSGE 474
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
T ANLFI+H+P + D +L F FG + S KV D T +SK +GFV Y + SA
Sbjct: 475 T----ANLFIFHLPGDVDDSKLMELFSKFGEIESVKVIRDPKTNLSKGYGFVKYCNIDSA 530
Query: 398 QNAIAMMNGCQLGGKKLKVQL 418
A++ MN ++G K LKV
Sbjct: 531 MEAVSKMNSYKIGKKHLKVSF 551
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 343 ANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKC-FGFVSYESPASAQNAI 401
N+F+ ++P F D++L F FG ++S V DK S FGFV + + AQ+AI
Sbjct: 122 CNVFVKYLPPHFSDEDLRELFTPFGEIVSCHVMTDKTRENSSLGFGFVRFSNENEAQDAI 181
Query: 402 AMMNGCQLGGKKLKVQL 418
+N +G K+L +L
Sbjct: 182 QGLNEKSIGNKRLLCKL 198
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K +++ LF+ +P H E L F+ F + +V I+ D T+ S+ F +R++
Sbjct: 205 KEKDQQSNLFIRNIPPHYDEETLKQAFEVFGPISKVKIMIDINTQRSKCYGFCKFENRKD 264
Query: 69 ADKAVNACHNKKTLPGASS---PLQVKYADGELERLEHKL 105
A A+ + K +S PL V++A+ E E+ + KL
Sbjct: 265 ALSAIQKMNGSKLDDDSSKDILPLVVRFAETEHEKQKRKL 304
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
E LF+ +P + +++L+ +F +F ++ V +I+D T S+G FV
Sbjct: 474 ETANLFIFHLPGDVDDSKLMELFSKFGEIESVKVIRDPKTNLSKGYGFV 522
>gi|149030744|gb|EDL85781.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_a [Rattus norvegicus]
gi|149030746|gb|EDL85783.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 270
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 181 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 240
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 241 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 270
>gi|193204848|ref|NP_001122629.1| Protein ETR-1, isoform d [Caenorhabditis elegans]
gi|351063344|emb|CCD71499.1| Protein ETR-1, isoform d [Caenorhabditis elegans]
Length = 535
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQ+FGD +L N F FG +LSAKVF+DK T +SKCFGFVSYE+ SA
Sbjct: 446 GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 505
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
NAI+ MNG Q+G K+LKVQLK D + PY
Sbjct: 506 NAISAMNGFQIGSKRLKVQLKVD--RGNPY 533
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
+LR S+GCAF+ + + A+ A + ++ ME
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTME 209
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 327 NSNPSTSSSGGTGPP-------GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
++ PST++ P +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 380 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|148706788|gb|EDL38735.1| trinucleotide repeat containing 4, isoform CRA_a [Mus musculus]
Length = 287
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 198 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 257
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 258 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 287
>gi|118485698|gb|ABK94699.1| unknown [Populus trichocarpa]
Length = 247
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 10/164 (6%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL++ +P+ TE + ++F+E V EV + +DK T + CFV + +EAD+A+ A
Sbjct: 81 KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYATFEEADRAIRA 140
Query: 76 CHNKKTLPGASSPLQVKYADGELER----------LEHKLFIGMLPKNVSEAEVSALFSI 125
HN+ T+PG +P +V+YADGE ER KL++G + K S+ E+ +FS
Sbjct: 141 LHNQHTIPGEVAPFKVRYADGERERPVARCSMVGGFVDKLYVGSINKLASKQEIEEIFSP 200
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 169
YG ++D+ I R + S+GCAF+K+ ++ ALAA++ +NG M
Sbjct: 201 YGHVEDVYIARDELKQSRGCAFVKFAHRDMALAAIKGLNGTLTM 244
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KL+I +P+ +E + +LF +G++ ++ + R + + F+KY T E+A A+ A
Sbjct: 81 KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYATFEEADRAIRA 140
Query: 163 INGKHKMEGSSVPLVVKWADTEKER 187
++ +H + G P V++AD E+ER
Sbjct: 141 LHNQHTIPGEVAPFKVRYADGERER 165
>gi|256078401|ref|XP_002575484.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350645920|emb|CCD59385.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 479
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 337 GTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 396
G P G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++P S
Sbjct: 387 GLWPEGCNLFIYHLPQEFGDPELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNPTS 446
Query: 397 AQNAIAMMNGCQLGGKKLKVQLKR-DNKQNKPY 428
AQ AI MNG Q+G K+LKVQLKR N KPY
Sbjct: 447 AQTAIHAMNGFQIGMKRLKVQLKRPKNDSTKPY 479
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 72/107 (67%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
PLQVK AD E E KLF+GML K +E +V LF +GTI++ ILR SKGCAF
Sbjct: 4 PLQVKTADMERRTEERKLFVGMLSKQQNEEDVRLLFEPFGTIEECTILRDQNGNSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+K+ T+++A +A+ ++G M G+S +VVK+AD+EKER R+ Q+
Sbjct: 64 VKFSTQQEAQSAILTLHGSQTMPGASSSIVVKFADSEKERHTRKIQQ 110
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
++ +EER KLFVG + K E + +F+ F ++E I++D+ S+GC FV ++Q
Sbjct: 13 ERRTEER-KLFVGMLSKQQNEEDVRLLFEPFGTIEECTILRDQNGN-SKGCAFVKFSTQQ 70
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+ H +T+PGASS + VK+AD E ER K+
Sbjct: 71 EAQSAILTLHGSQTMPGASSSIVVKFADSEKERHTRKI 108
>gi|159163851|pdb|2CPZ|A Chain A, Solution Structure Of Rna Binding Domain 3 In Cug Triplet
Repeat Rna-Binding Protein 1
gi|255311729|pdb|2RQ4|A Chain A, Refinement Of Rna Binding Domain 3 In Cug Triplet Repeat
Rna-Binding Protein 1
gi|255311730|pdb|2RQC|A Chain A, Solution Structure Of Rna-Binding Domain 3 Of Cugbp1 In
Complex With Rna (Ug)3
Length = 115
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 69/88 (78%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ+L F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 22 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 81
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
AI MNG Q+G K+LKVQLKR +K
Sbjct: 82 AAIQSMNGFQIGMKRLKVQLKRSKNDSK 109
>gi|313228868|emb|CBY18019.1| unnamed protein product [Oikopleura dioica]
Length = 398
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 83/133 (62%), Gaps = 5/133 (3%)
Query: 297 GLQYPM-PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFG 355
G Q+ M P P G PL S G S A N NP GP G NLFIYH+PQEF
Sbjct: 270 GYQFVMVPNPAGGYTQVPL--SCGGPSMAALNQNPCAPQR--EGPDGCNLFIYHLPQEFT 325
Query: 356 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 415
D +L N F FG V+SAKVF+D+AT SKCFGFVSY++ SA NAI MNG Q+G K+LK
Sbjct: 326 DADLANIFAPFGAVISAKVFIDRATNQSKCFGFVSYDNAPSAANAITSMNGFQIGMKRLK 385
Query: 416 VQLKRDNKQNKPY 428
VQLKR +K +
Sbjct: 386 VQLKRPKAGDKNF 398
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LF YG I++ ILR + +SKGCAF+K + A A+
Sbjct: 44 DRKLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEGSSKGCAFIKLANVQHAQNAIA 103
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
++G M G+S +VVK AD EKER R+ Q+
Sbjct: 104 QMHGSTTMPGASSSIVVKLADNEKERALRKMQQ 136
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F ++ ++E I++ +S+GC F+ + Q A A+
Sbjct: 46 KLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEG-SSKGCAFIKLANVQHAQNAIAQ 104
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H T+PGASS + VK AD E ER K+
Sbjct: 105 MHGSTTMPGASSSIVVKLADNEKERALRKM 134
>gi|307175839|gb|EFN65654.1| CUG-BP- and ETR-3-like factor 4 [Camponotus floridanus]
Length = 278
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 85/139 (61%), Gaps = 17/139 (12%)
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYH 349
+ YPAV G Q+P P M P S+S GP G NLFIYH
Sbjct: 157 AAYPAVYG-QFPQAIPQPMTAVAPTQREGCSIS----------------GPEGCNLFIYH 199
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+
Sbjct: 200 LPQEFGDGELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQI 259
Query: 410 GGKKLKVQLKRDNKQNKPY 428
G K+LKVQLKR ++PY
Sbjct: 260 GMKRLKVQLKRPKDASRPY 278
>gi|194761394|ref|XP_001962914.1| GF19661 [Drosophila ananassae]
gi|190616611|gb|EDV32135.1| GF19661 [Drosophila ananassae]
Length = 229
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 140 GPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 199
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 200 AAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 229
>gi|358333422|dbj|GAA51938.1| CUG-BP- and ETR3-like factor [Clonorchis sinensis]
Length = 849
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 66/83 (79%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
TGP G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++ SA
Sbjct: 710 TGPEGCNLFIYHLPQEFGDNELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNQTSA 769
Query: 398 QNAIAMMNGCQLGGKKLKVQLKR 420
QNAI MNG Q+G K+LKVQLKR
Sbjct: 770 QNAIQAMNGFQIGLKRLKVQLKR 792
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALF 123
R A + H+++ P S +D L + KLF+GML K +E E+ LF
Sbjct: 75 RHSAPASTTKSHSRQLTPNGS------RSDSALGFTIEDRKLFVGMLGKQQTEDELRTLF 128
Query: 124 SIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
+ YG+I++ +LR SKGCAF+K+ + +AL+A+E ++ M+G+S PLVVK+ADT
Sbjct: 129 APYGSIEECTVLRDQNGASKGCAFVKFTSNSEALSAIEGLHNSQTMQGASSPLVVKFADT 188
Query: 184 EKE 186
++E
Sbjct: 189 DRE 191
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E+R KLFVG + K TE +L +F + ++E +++D+ AS+GC FV S EA
Sbjct: 106 EDR-KLFVGMLGKQQTEDELRTLFAPYGSIEECTVLRDQN-GASKGCAFVKFTSNSEALS 163
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE 99
A+ HN +T+ GASSPL VK+AD + E
Sbjct: 164 AIEGLHNSQTMQGASSPLVVKFADTDRE 191
>gi|21410087|gb|AAH30835.1| Bruno-like 6, RNA binding protein (Drosophila) [Homo sapiens]
Length = 481
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCFGFVS+++P SAQ
Sbjct: 392 GPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 451
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LK QLKR N+PY
Sbjct: 452 TAIQAMNGFQIGMKRLKAQLKRPKDANRPY 481
>gi|320545831|ref|NP_001189094.1| bruno-3, isoform G [Drosophila melanogaster]
gi|318069195|gb|ADV37530.1| bruno-3, isoform G [Drosophila melanogaster]
Length = 390
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 300 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 359
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 360 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 390
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 148
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 149 SPYGAYAQL 157
>gi|269868322|gb|ACZ52465.1| Bruno-3 transcript variant 33 [Drosophila persimilis]
Length = 137
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 47 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 106
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 107 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 137
>gi|269868152|gb|ACZ52382.1| Bruno-3 transcript variant 12 [Drosophila pseudoobscura]
Length = 375
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 285 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 344
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 345 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 375
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868307|gb|ACZ52458.1| Bruno-3 transcript variant 9 [Drosophila persimilis]
Length = 381
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 291 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 350
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 351 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|320545823|ref|NP_001189090.1| bruno-3, isoform C [Drosophila melanogaster]
gi|318069191|gb|ADV37526.1| bruno-3, isoform C [Drosophila melanogaster]
Length = 396
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 306 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 365
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 366 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 396
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|320545841|ref|NP_001189099.1| bruno-3, isoform L [Drosophila melanogaster]
gi|318069200|gb|ADV37535.1| bruno-3, isoform L [Drosophila melanogaster]
Length = 345
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 255 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 314
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 315 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 345
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF 106
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER ++
Sbjct: 27 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQ 86
Query: 107 IGMLPKNVSEAEVSALFSIYGTIKDL 132
N+ V FS YG L
Sbjct: 87 QMAGHMNLLNPFVFNQFSPYGAYAQL 112
>gi|269868194|gb|ACZ52403.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 362
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 229 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 275
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT +KCFGFVS+++PASAQ AI
Sbjct: 276 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQNKCFGFVSFDNPASAQAAI 335
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR ++PY
Sbjct: 336 QAMNGFQIGMKRLKVQLKRPKDASRPY 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868182|gb|ACZ52397.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 291 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 350
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 351 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|341865543|tpg|DAA34911.1| TPA_exp: RRM domain-containing RNA-binding protein Bruno
[Pleurobrachia pileus]
Length = 384
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQVPK+ E+ L F+++ + + + +D+ ++A +GC FV + A+ A++
Sbjct: 18 LKLFVGQVPKNFEESDLKPYFEKYGPLVNIKVCRDRDSKAHKGCAFVTFTNLDNAENAMH 77
Query: 75 ACHNKKTLPGASSPLQVKYA-DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
H++ LPGA +Q+K D + ++ + +LF+GM+ K+++ E+ A+F +G + D
Sbjct: 78 EMHDRIALPGAKKEMQIKAVHDDDNKKFDKRLFVGMISKSLNGDELKAMFEQFGEVVDCN 137
Query: 134 ILR---GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
IL ++ S+GC F+K+ L A++ ++ MEG + PLVVK AD+ ++ R
Sbjct: 138 ILTSMINGEKMSRGCGFVKFAKASSCLQAIKEMHQSQTMEGCNSPLVVKHADSPADKMKR 197
Query: 191 RA----QKAQSQANNL 202
A ++ S+ NN
Sbjct: 198 NASGFEEREDSKRNNF 213
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI-AM 403
LF+ +P+ F + +L F+ +G +++ KV D+ + K FV++ + +A+NA+ M
Sbjct: 20 LFVGQVPKNFEESDLKPYFEKYGPLVNIKVCRDRDSKAHKGCAFVTFTNLDNAENAMHEM 79
Query: 404 MNGCQLGGKKLKVQLK----RDNKQ 424
+ L G K ++Q+K DNK+
Sbjct: 80 HDRIALPGAKKEMQIKAVHDDDNKK 104
>gi|269868320|gb|ACZ52464.1| Bruno-3 transcript variant 28 [Drosophila persimilis]
Length = 336
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 246 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 305
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 306 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQT 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER ++
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQTRRM 85
>gi|320545825|ref|NP_001189091.1| bruno-3, isoform D [Drosophila melanogaster]
gi|318069192|gb|ADV37527.1| bruno-3, isoform D [Drosophila melanogaster]
Length = 382
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 292 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 351
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 352 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 382
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 125
>gi|320545835|ref|NP_001189096.1| bruno-3, isoform I [Drosophila melanogaster]
gi|318069197|gb|ADV37532.1| bruno-3, isoform I [Drosophila melanogaster]
Length = 384
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 294 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 353
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 354 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 384
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 70/104 (67%)
Query: 99 ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALA 158
E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +
Sbjct: 31 EHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQS 90
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 91 AITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 134
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 24 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 82
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 83 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 142
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 143 SPYGAYAQL 151
>gi|269868208|gb|ACZ52410.1| Bruno-3 transcript variant 30 [Drosophila pseudoobscura]
Length = 330
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 240 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 299
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 300 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 330
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868202|gb|ACZ52407.1| Bruno-3 transcript variant 21 [Drosophila pseudoobscura]
Length = 353
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 72/91 (79%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT +SKCFGFVS+++PASA
Sbjct: 263 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNLSKCFGFVSFDNPASA 322
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G ++LKVQLKR ++PY
Sbjct: 323 QAAIQAMNGFQIGMERLKVQLKRPKDASRPY 353
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 144 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 54 GCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 112
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 49 DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++T GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 46 NRTRDPRGGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 97
>gi|269868184|gb|ACZ52398.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 291 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNPSKCFGFVSFDNPASA 350
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 351 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868204|gb|ACZ52408.1| Bruno-3 transcript variant 25 [Drosophila pseudoobscura]
Length = 347
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 257 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 316
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 317 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 49 DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++T GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 46 NRTRDPRGGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 97
>gi|320545839|ref|NP_001189098.1| bruno-3, isoform K [Drosophila melanogaster]
gi|318069199|gb|ADV37534.1| bruno-3, isoform K [Drosophila melanogaster]
Length = 331
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 241 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 300
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 301 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 331
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868172|gb|ACZ52392.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
gi|269868176|gb|ACZ52394.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 246 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 305
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 306 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|320545829|ref|NP_001189093.1| bruno-3, isoform F [Drosophila melanogaster]
gi|318069194|gb|ADV37529.1| bruno-3, isoform F [Drosophila melanogaster]
Length = 337
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 247 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 306
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 307 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 337
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 80
>gi|432114336|gb|ELK36264.1| CUGBP Elav-like family member 3 [Myotis davidii]
Length = 435
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 346 GPDGCNIFIYHLPQEFTDSEILQMFIPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 405
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 406 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 435
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
+A H +KTLPG + P+QVK AD E
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE 89
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 96 GELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQ 155
G LE + KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +
Sbjct: 169 GPLE--DRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAE 226
Query: 156 ALAALEAINGKHKM 169
A AA+ ++ +
Sbjct: 227 AQAAINTLHSSRTL 240
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
++ + + G + P+ VK AD+E
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSE 89
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEAD 70
E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 172 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQ 228
Query: 71 KAVNACHNKKTLP 83
A+N H+ +TLP
Sbjct: 229 AAINTLHSSRTLP 241
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|47200683|emb|CAF87626.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D EL F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 81 GPEGCNIFIYHLPQEFSDSELLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQ 140
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 141 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 170
>gi|386769529|ref|NP_001245999.1| bruno-2, isoform H [Drosophila melanogaster]
gi|386769535|ref|NP_001246002.1| bruno-2, isoform J [Drosophila melanogaster]
gi|226371828|gb|ACO51539.1| MIP06224p [Drosophila melanogaster]
gi|383291457|gb|AFH03673.1| bruno-2, isoform H [Drosophila melanogaster]
gi|383291460|gb|AFH03676.1| bruno-2, isoform J [Drosophila melanogaster]
Length = 651
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 562 GPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 621
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 622 AAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 651
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 4/129 (3%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++
Sbjct: 139 ERKLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIK 198
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALP 217
A++ MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A
Sbjct: 199 ALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATA 258
Query: 218 MGYAPPYNG 226
+ APP G
Sbjct: 259 LIAAPPSAG 267
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++Q A A
Sbjct: 139 ER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGA 196
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 197 IKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 229
>gi|307192008|gb|EFN75398.1| CUG-BP- and ETR-3-like factor 4 [Harpegnathos saltator]
Length = 278
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 85/139 (61%), Gaps = 17/139 (12%)
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYH 349
+ YPAV G Q+P P M P S+S GP G NLFIYH
Sbjct: 157 AAYPAVYG-QFPQAIPQPMTAVAPTQREGCSIS----------------GPEGCNLFIYH 199
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+
Sbjct: 200 LPQEFGDGELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI 259
Query: 410 GGKKLKVQLKRDNKQNKPY 428
G K+LKVQLKR ++PY
Sbjct: 260 GMKRLKVQLKRPKDASRPY 278
>gi|269868164|gb|ACZ52388.1| Bruno-3 transcript variant 27 [Drosophila pseudoobscura]
Length = 341
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 251 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 310
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 311 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 341
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 49 DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++T GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 40 NRTRDPRGGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 91
>gi|432116895|gb|ELK37482.1| CUGBP Elav-like family member 5 [Myotis davidii]
Length = 426
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 337 GPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQ 396
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR PY
Sbjct: 397 TAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 426
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 104/216 (48%), Gaps = 55/216 (25%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +G
Sbjct: 5 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKG--------------- 49
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ KLF+GML K SE +V LF +G I +
Sbjct: 50 -----------------------------DRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 80
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 81 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 140
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
Q+ Q L PSL LP PY+ Y
Sbjct: 141 QQMVGQLGIL------TPSL--TLPFS---PYSAYA 165
>gi|358340719|dbj|GAA48557.1| CUG-BP- and ETR3-like factor [Clonorchis sinensis]
Length = 675
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
TGP G NLFIYH+PQEFGD EL F FG V+SAKV+VD+AT SKCFGFVS+++P SA
Sbjct: 584 TGPEGCNLFIYHLPQEFGDPELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNPTSA 643
Query: 398 QNAIAMMNGCQLGGKKLKVQLKR-DNKQNKPY 428
AI MNG Q+G K+LKVQLKR + KPY
Sbjct: 644 HAAIQAMNGFQIGMKRLKVQLKRPKSDATKPY 675
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 64/93 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K E +V LF +GTI++ ILR SKGCAF+K+ ++++A +A+
Sbjct: 170 ERKLFVGMLSKQQGEEDVRRLFEPFGTIEECTILRDQSGNSKGCAFVKFSSQQEAQSAIL 229
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
A++G M G+S +VVK+AD+EKER R+ Q+
Sbjct: 230 ALHGSQTMPGASSSIVVKFADSEKERHTRKIQQ 262
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A +++EER KLFVG + K E + +F+ F ++E I++D++ S+GC FV
Sbjct: 159 ASQSNSAQNNEER-KLFVGMLSKQQGEEDVRRLFEPFGTIEECTILRDQSGN-SKGCAFV 216
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S+QEA A+ A H +T+PGASS + VK+AD E ER K+
Sbjct: 217 KFSSQQEAQSAILALHGSQTMPGASSSIVVKFADSEKERHTRKI 260
>gi|10185822|gb|AAG14457.1|AF284423_1 RNA-binding protein BRUNOL1 [Homo sapiens]
Length = 140
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 51 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 110
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 111 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 140
>gi|198474574|ref|XP_002132714.1| GA25731 [Drosophila pseudoobscura pseudoobscura]
gi|198138448|gb|EDY70116.1| GA25731 [Drosophila pseudoobscura pseudoobscura]
Length = 574
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 485 GPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 544
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 545 AAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 574
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 60/86 (69%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A+++++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKSLHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQK 194
MEG S PLVVK+ADT+KE+ ++ Q+
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQ 86
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ + H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKSLHQSQTME 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|195148190|ref|XP_002015057.1| GL18622 [Drosophila persimilis]
gi|194107010|gb|EDW29053.1| GL18622 [Drosophila persimilis]
Length = 398
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 309 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 368
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ +KPY
Sbjct: 369 VAIKAMNGFQVGTKRLKVQLKKPKDASKPY 398
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++
Sbjct: 29 ERKLFVGMLNKKLNENDVRKLFEVHGNIEECTVLRDQNGQSKGCAFVTFATKHAAISAIK 88
Query: 162 AINGKHK-MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
++K MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 89 VTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 130
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
S+ ER KLFVG + K + E + +F+ ++E +++D+ + S+GC FV ++ A
Sbjct: 26 SAGER-KLFVGMLNKKLNENDVRKLFEVHGNIEECTVLRDQNGQ-SKGCAFVTFATKHAA 83
Query: 70 DKAVNACHNK-KTLPGASSPLQVKYADGELERLEHKL 105
A+ ++ K + G +SPL VK+AD + E+ + K+
Sbjct: 84 ISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKI 120
>gi|313227641|emb|CBY22788.1| unnamed protein product [Oikopleura dioica]
Length = 401
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Query: 34 MFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93
MFKEF V ++ I++D+ T SRGCCFV + AD A A + + LPG +P+Q++
Sbjct: 1 MFKEFGEVFDLQILRDRITGHSRGCCFVTFFETKSADDAQRALNGIRVLPGMLNPVQMRA 60
Query: 94 ADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETK 153
AD E +R + +LFIGMLP E + +F YG I++LQ+LR TS+ CAFL + ++
Sbjct: 61 ADSE-KRSDRRLFIGMLPITCDEEMLKKMFEQYGKIQELQVLRKFNGTSRRCAFLTFSSR 119
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK-AQSQANNLPNADSQHPSL 212
+A +A++A+N + +VV+ ADT K+++ R+ ++ +S A L + L
Sbjct: 120 LEAQSAVQALNNTVVSSICAQGMVVRLADTPKQKEKRKLERQLKSCAMQLQRLCTDEDDL 179
Query: 213 FGALPM 218
G L +
Sbjct: 180 VGKLLL 185
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 8/101 (7%)
Query: 328 SNPSTSSS------GGT--GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
S+ ST SS GGT GP GANLF+YH+P+ F D +L F G ++SAKV+VD+
Sbjct: 246 SDDSTKSSTENQTIGGTQAGPEGANLFVYHLPKRFNDSDLYALFSTIGELMSAKVYVDRH 305
Query: 380 TGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKR 420
T SKCFGFVSY+ A AI N Q+ K+LKV++K+
Sbjct: 306 TQESKCFGFVSYKHIIDASAAIKRFNTYQVDDKRLKVEMKK 346
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK+S +LF+G +P E L MF+++ + E+ +++ K SR C F
Sbjct: 58 MRAADSEKRSDR---RLFIGMLPITCDEEMLKKMFEQYGKIQELQVLR-KFNGTSRRCAF 113
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADG----ELERLEHKL 105
+ SR EA AV A +N + + V+ AD E +LE +L
Sbjct: 114 LTFSSRLEAQSAVQALNNTVVSSICAQGMVVRLADTPKQKEKRKLERQL 162
>gi|351714059|gb|EHB16978.1| CUG-BP- and ETR-3-like factor 5 [Heterocephalus glaber]
Length = 224
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 77/110 (70%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G++ + + +T+ S GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+
Sbjct: 115 GNIISSKVFMDRATNQSKCFGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDR 174
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AT SKCFGFVS+++PASAQ I MNG Q+G K+LKVQLKR + PY
Sbjct: 175 ATNQSKCFGFVSFDNPASAQTGIQAMNGFQIGMKRLKVQLKRPKELGHPY 224
>gi|195472359|ref|XP_002088468.1| GE18585 [Drosophila yakuba]
gi|194174569|gb|EDW88180.1| GE18585 [Drosophila yakuba]
Length = 508
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 419 GPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 478
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 479 AAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 508
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 224
M+G S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MDGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 225 NG 226
G
Sbjct: 121 AG 122
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKALHQSQTMD 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|351711625|gb|EHB14544.1| CUG-BP- and ETR-3-like factor 4 [Heterocephalus glaber]
Length = 702
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 68/89 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFG VS+++PASAQ
Sbjct: 582 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATSQSKCFGLVSFDTPASAQ 641
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKP 427
AI MNG Q+G K+LKVQLKR N+P
Sbjct: 642 TAIQAMNGFQIGMKRLKVQLKRPKDANRP 670
>gi|380799133|gb|AFE71442.1| CUGBP Elav-like family member 3 isoform 2, partial [Macaca mulatta]
Length = 102
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G N+FIYH+PQEF D E+ F FG V+SAKVFVD+AT SKCFGFVS+++PASAQ
Sbjct: 13 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 72
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 73 AAIQAMNGFQIGMKRLKVQLKRPKDANRPY 102
>gi|241626818|ref|XP_002409727.1| RNA binding protein NAPOR-3, putative [Ixodes scapularis]
gi|215503224|gb|EEC12718.1| RNA binding protein NAPOR-3, putative [Ixodes scapularis]
Length = 139
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 67/89 (75%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P GANLFIYH+PQEF D +L F FG V+SAKVF+DK T +SKCFGFVSY++ SAQ
Sbjct: 51 PEGANLFIYHLPQEFTDSDLAQTFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNSLSAQA 110
Query: 400 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 111 AIQAMNGFQIGTKRLKVQLKRSKDASKPY 139
>gi|330864857|gb|AEC46884.1| FI14817p [Drosophila melanogaster]
Length = 302
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 169 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 215
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 216 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 275
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+L+VQLKR ++PY
Sbjct: 276 QAMNGFQIGMKRLEVQLKRPKDASRPY 302
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 1 MPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 34
>gi|391330723|ref|XP_003739804.1| PREDICTED: CUGBP Elav-like family member 3-like [Metaseiulus
occidentalis]
Length = 484
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL + F FG V+SAKVF+D+AT SKCFGFVS+++ SAQ
Sbjct: 395 GPEGCNLFIYHLPQEFGDAELTHMFLPFGNVISAKVFIDRATNQSKCFGFVSFDNQNSAQ 454
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
+AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 455 SAIQAMNGFQIGMKRLKVQLKRPKDASRPY 484
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 64/92 (69%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAA 159
R E KLF+GML K +E ++ LF +G+I++ ILRG SKGCAF+K+ T +A+ A
Sbjct: 4 RQERKLFVGMLGKQQNEEDIRDLFQGFGSIEECTILRGPDGHSKGCAFVKFSTHNEAMNA 63
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ A++G M G+S +VVK+ADTE+ERQ RR
Sbjct: 64 IAALHGSQTMPGASSTIVVKFADTERERQMRR 95
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ER KLFVG + K E + +F+ F ++E I++ S+GC FV + EA
Sbjct: 5 QER-KLFVGMLGKQQNEEDIRDLFQGFGSIEECTILRGPDGH-SKGCAFVKFSTHNEAMN 62
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ A H +T+PGASS + VK+AD E ER ++
Sbjct: 63 AIAALHGSQTMPGASSTIVVKFADTERERQMRRM 96
>gi|157108555|ref|XP_001650282.1| hypothetical protein AaeL_AAEL000695 [Aedes aegypti]
gi|108884042|gb|EAT48267.1| AAEL000695-PA [Aedes aegypti]
Length = 368
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++ ASAQ
Sbjct: 279 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVVSAKVFIDKQTNLSKCFGFVSFDNVASAQ 338
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 339 AAIQAMHGFQIGTKRLKVQLKRSKDASKPY 368
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 70/101 (69%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K E +V LFS +G+I++ +LR + SKGCAF+ + TK+ A+ A++
Sbjct: 3 ERKLFVGMLSKKYHENDVRHLFSGHGSIEECTVLRDTSGQSKGCAFVTFATKQAAIGAIK 62
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
+++ MEG S PLVVK+ADT+K++ A+R Q+ QS N+
Sbjct: 63 SLHQSKTMEGCSAPLVVKFADTQKDKDAKRMQQMQSNLWNI 103
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EER KLFVG + K E + +F ++E +++D T+ S+GC FV ++Q A
Sbjct: 2 EER-KLFVGMLSKKYHENDVRHLFSGHGSIEECTVLRD-TSGQSKGCAFVTFATKQAAIG 59
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
A+ + H KT+ G S+PL VK+AD + ++
Sbjct: 60 AIKSLHQSKTMEGCSAPLVVKFADTQKDK 88
>gi|322798836|gb|EFZ20383.1| hypothetical protein SINV_80350 [Solenopsis invicta]
Length = 385
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ +SAQ
Sbjct: 296 GPEGCNLFIYHLPQEFSDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVSYDNASSAQ 355
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 356 AAIQTMHGFQIGMKRLKVQLKRSKDASKPY 385
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 62/94 (65%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 94
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSAYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|269868170|gb|ACZ52391.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 246 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 305
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q I MNG Q+G K+LKVQLKR ++PY
Sbjct: 306 QATIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|307170912|gb|EFN63015.1| CUG-BP- and ETR-3-like factor 1 [Camponotus floridanus]
Length = 395
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ SAQ
Sbjct: 306 GPEGCNLFIYHLPQEFSDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVSYDNATSAQ 365
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 366 MAIQTMHGFQIGMKRLKVQLKRSKDASKPY 395
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSAYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|402590229|gb|EJW84160.1| trinucleotide repeat containing 4 [Wuchereria bancrofti]
Length = 315
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVSY++ ASA
Sbjct: 228 GPEGCNLFIYHLPQEFGDAELMQMFMPFGHVISAKVFIDRATNQSKCFGFVSYDNTASAM 287
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 288 AAIQAMNGFQIGMKRLKVQLKR--PRDKPY 315
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A+ A++G M G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 2 AINALHGSQTMPGASSSLVVKFADTEKERQLRRMQQMAAQ 41
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
A+NA H +T+PGASS L VK+AD E ER
Sbjct: 2 AINALHGSQTMPGASSSLVVKFADTEKER 30
>gi|312076960|ref|XP_003141093.1| LYST-interacting protein LIP9 [Loa loa]
Length = 473
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVSY++ ASA
Sbjct: 386 GPEGCNLFIYHLPQEFGDTELMQMFMPFGHVISAKVFIDRATNQSKCFGFVSYDNTASAM 445
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR ++KPY
Sbjct: 446 AAIQAMNGFQIGMKRLKVQLKR--PRDKPY 473
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 75/116 (64%), Gaps = 6/116 (5%)
Query: 89 LQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS 142
+QVK AD E E KLF+GML K +E +V ALF+ +G I ++ +LRG+ S
Sbjct: 5 MQVKPADNESRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPFGVIDEVTVLRGADGLS 64
Query: 143 KGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
KGCAF+K+ T QA A+ A++G M G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 65 KGCAFVKFATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKERQLRRMQQMAAQ 120
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
ES+ + + E KLFVG + K E + A+F F ++DEV +++ S+GC FV
Sbjct: 13 ESRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPFGVIDEVTVLRG-ADGLSKGCAFVK 71
Query: 63 CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ +A A+NA H +T+PGASS L VK+AD E ER
Sbjct: 72 FATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKER 109
>gi|67611128|ref|XP_667137.1| RNA binding protein [Cryptosporidium hominis TU502]
gi|54658240|gb|EAL36907.1| RNA binding protein [Cryptosporidium hominis]
Length = 903
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 110/195 (56%), Gaps = 13/195 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+++ E L +FK + V V++I++K+T RG V S +AD A+
Sbjct: 305 IKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALR 364
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ K L PL+V+Y+ GE ERL + KLF+G LP+N++E E+ L
Sbjct: 365 ELNSIKVLDELRGPLKVQYSTGEPERLGFESESCIPGVDQVKLFVGALPRNITEDEIREL 424
Query: 123 FSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YG I ++ I+R KGCAF+KY KEQ L A+++++G + + P+ V++A
Sbjct: 425 FSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALTLADVNRPIEVRFA 484
Query: 182 DTEKERQARRAQKAQ 196
+ + AQ
Sbjct: 485 SKNHQSSTSSSLIAQ 499
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
GPPGAN+FI+++P E+ + L F FG +LSA + VDK +G +K FVSY++ SA
Sbjct: 729 VGPPGANIFIFNVPYEWDKKSLVGLFCRFGNILSAHLMVDKTSGRNKGVAFVSYDNIHSA 788
Query: 398 QNAIAMMNG-CQLGGKKLKVQLKR 420
A+ MNG G+KLKV +K+
Sbjct: 789 AEAVNHMNGFITEQGRKLKVSIKQ 812
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 51/82 (62%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLFVG +P+++TE ++ +F + ++E+ I+++ + +GC FV +++ A
Sbjct: 403 DQVKLFVGALPRNITEDEIRELFSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFA 462
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + H TL + P++V++A
Sbjct: 463 IKSLHGALTLADVNRPIEVRFA 484
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAA 159
+E KLF+G +P+N+ E ++ LF +YG + ++ ++R S +G A + E+ QA A
Sbjct: 303 VEIKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFA 362
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
L +N ++ PL V+++ E ER ++ +P D Q GALP
Sbjct: 363 LRELNSIKVLDELRGPLKVQYSTGEPERLGFESESC------IPGVD-QVKLFVGALP 413
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LF+ +P+ + +L + F+ +GRV++ V +K+TG+ + V+ ES A A A+ +
Sbjct: 307 LFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALREL 366
Query: 405 NGCQL 409
N ++
Sbjct: 367 NSIKV 371
>gi|269868168|gb|ACZ52390.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQE GD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 246 SGPEGCNLFIYHLPQELGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 305
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 306 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868166|gb|ACZ52389.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KV +D+AT SKCFGFVS+++PASA
Sbjct: 246 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVLIDRATNQSKCFGFVSFDNPASA 305
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 306 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868174|gb|ACZ52393.1| Bruno-3 transcript variant 28 [Drosophila pseudoobscura]
Length = 336
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQE GD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 246 SGPEGCNLFIYHLPQELGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 305
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 306 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 336
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRXQQMAGHMNLL 95
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|24583879|ref|NP_723740.1| arrest, isoform D [Drosophila melanogaster]
gi|17946480|gb|AAL49272.1| RE72594p [Drosophila melanogaster]
gi|22946321|gb|AAN10813.1| arrest, isoform D [Drosophila melanogaster]
gi|220948776|gb|ACL86931.1| aret-PD [synthetic construct]
Length = 361
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 273 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 332
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 333 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 361
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 1 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 60
Query: 169 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 61 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 95
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNK-KTL 82
K + E + +F+ ++E +++D+ + S+GC FV ++ A A+ ++ K +
Sbjct: 4 KKLNENDVRKLFEVHGAIEECTVLRDQNGQ-SKGCAFVTFATKHAAISAIKVTLSQNKIM 62
Query: 83 PGASSPLQVKYADGELERLEHKL 105
G +SPL VK+AD + E+ + K+
Sbjct: 63 EGCTSPLVVKFADTQKEKEQKKI 85
>gi|269868180|gb|ACZ52396.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT S CFGFVS+++PASA
Sbjct: 291 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSICFGFVSFDNPASA 350
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 351 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|356483111|gb|AET11743.1| FI15316p1 [Drosophila melanogaster]
Length = 317
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 229 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 288
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 289 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 317
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 2 MEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 35
>gi|426253953|ref|XP_004020653.1| PREDICTED: CUGBP Elav-like family member 4 [Ovis aries]
Length = 513
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 67/87 (77%)
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQE GD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASAQ AI
Sbjct: 427 GCNLFIYHLPQELGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAI 486
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR N+PY
Sbjct: 487 QAMNGFQIGMKRLKVQLKRPKDANRPY 513
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 92/188 (48%), Gaps = 33/188 (17%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +G F S A
Sbjct: 46 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGFAFKTNCSTDSAF 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
K A H K LPG + P+QVK AD E S S L
Sbjct: 106 KVGRAVHKMKELPGMNRPIQVKPADSE-----------------SRGGSSCL-------- 140
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+Q CAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 141 --------RQPPSRCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 192
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 193 RMQQMAGQ 200
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGF---VSYESPASAQNAI 401
LFI IP+ +++L F+ FG++ V D+ TG+ K F F S +S A+
Sbjct: 52 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGFAFKTNCSTDSAFKVGRAV 111
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNK 426
M +L G +Q+K + +++
Sbjct: 112 HKMK--ELPGMNRPIQVKPADSESR 134
>gi|390338613|ref|XP_003724811.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 1
[Strongylocentrotus purpuratus]
Length = 469
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 67/90 (74%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG+V+S+KVFVD+ T SKCFGFVS+++P AQ
Sbjct: 380 GPEGCNLFIYHLPQEFGDAELTQMFVPFGQVISSKVFVDRVTNQSKCFGFVSFDNPQCAQ 439
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQ KR NKPY
Sbjct: 440 AAIQAMNGFQIGMKRLKVQHKRPKDANKPY 469
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 48/183 (26%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLFVGQ+P+++ E L +F++F + E+ +++D+ T +GC F+ R+ A +
Sbjct: 45 HDAIKLFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAIR 104
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A A H +KTLPG + LQVK AD E
Sbjct: 105 AQKALHEQKTLPGMTRALQVKPADSE---------------------------------- 130
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
RG GCAF+K+ T+++A+ A+ +IN ++ LVVK+ADTEKERQ RR
Sbjct: 131 ---SRG------GCAFVKFSTRKEAVGAINSIN-----MSANPNLVVKFADTEKERQLRR 176
Query: 192 AQK 194
Q+
Sbjct: 177 MQQ 179
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY---ESPASAQNAI 401
LF+ IP+ +++L F+ FGR+ V D+ TGV K F++Y ES AQ A+
Sbjct: 50 LFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAIRAQKAL 109
>gi|170061983|ref|XP_001866472.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880043|gb|EDS43426.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 359
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++ ASAQ
Sbjct: 270 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVVSAKVFIDKQTNLSKCFGFVSFDNGASAQ 329
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 330 AAIQAMHGFQIGTKRLKVQLKRSKDASKPY 359
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K +E +V LFS +G+I++ +LR SKGCAF+ + TK+ A+ A++
Sbjct: 3 ERKLFVGMLSKKYNENDVRQLFSGHGSIEECTVLRDPSGQSKGCAFVTFATKQAAIGAIK 62
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A++ MEG S PLVVK+ADT+K++ A+R Q+ QS N+
Sbjct: 63 ALHQSKTMEGCSAPLVVKFADTQKDKDAKRMQQMQSNLWNI 103
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K E + +F ++E +++D + + S+GC FV ++Q A A+ A
Sbjct: 5 KLFVGMLSKKYNENDVRQLFSGHGSIEECTVLRDPSGQ-SKGCAFVTFATKQAAIGAIKA 63
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H KT+ G S+PL VK+AD + ++
Sbjct: 64 LHQSKTMEGCSAPLVVKFADTQKDK 88
>gi|313247153|emb|CBY35974.1| unnamed protein product [Oikopleura dioica]
Length = 414
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 84/147 (57%), Gaps = 17/147 (11%)
Query: 297 GLQYPM-PYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGT--------------GPP 341
G Q+ M P P G PL S G S A N NP G GP
Sbjct: 270 GYQFVMVPNPAGGYTQVPL--SCGGPSMAALNQNPCAPQREGNFHSLVLHNFNKLLPGPD 327
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEF D +L N F FG V+SAKVF+D+AT SKCFGFVSY++ SA NAI
Sbjct: 328 GCNLFIYHLPQEFTDADLANIFAPFGAVISAKVFIDRATNQSKCFGFVSYDNAPSAANAI 387
Query: 402 AMMNGCQLGGKKLKVQLKRDNKQNKPY 428
MNG Q+G K+LKVQLKR +K +
Sbjct: 388 TSMNGFQIGMKRLKVQLKRPKAGDKNF 414
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LF YG I++ ILR + +SKGCAF+K + A A+
Sbjct: 44 DRKLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEGSSKGCAFIKLANVQHAQNAIA 103
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
++G M G+S +VVK AD EKER R+ Q+
Sbjct: 104 QMHGSTTMPGASSSIVVKLADNEKERALRKMQQ 136
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F ++ ++E I++ +S+GC F+ + Q A A+
Sbjct: 46 KLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEG-SSKGCAFIKLANVQHAQNAIAQ 104
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H T+PGASS + VK AD E ER K+
Sbjct: 105 MHGSTTMPGASSSIVVKLADNEKERALRKM 134
>gi|195351039|ref|XP_002042044.1| GM26796 [Drosophila sechellia]
gi|195578729|ref|XP_002079216.1| GD23834 [Drosophila simulans]
gi|194123868|gb|EDW45911.1| GM26796 [Drosophila sechellia]
gi|194191225|gb|EDX04801.1| GD23834 [Drosophila simulans]
Length = 163
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 74 GPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 133
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 134 AAIQAMHGFQIGTKRLKVQLKRSKDAAKPY 163
>gi|194861272|ref|XP_001969746.1| GG23781 [Drosophila erecta]
gi|190661613|gb|EDV58805.1| GG23781 [Drosophila erecta]
Length = 163
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++P SA
Sbjct: 74 GPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 133
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 134 AAIQAMHGFQIGAKRLKVQLKRSKDAAKPY 163
>gi|332021723|gb|EGI62079.1| CUG-BP- and ETR-3-like factor 2 [Acromyrmex echinatior]
Length = 405
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ +SAQ
Sbjct: 316 GPEGCNLFIYHLPQEFSDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVSYDNASSAQ 375
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 376 AAIQTMHGFQIGMKRLKVQLKRSKDACKPY 405
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSAYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|307193708|gb|EFN76391.1| CUG-BP- and ETR-3-like factor 1 [Harpegnathos saltator]
Length = 385
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ +SAQ
Sbjct: 296 GPEGCNLFIYHLPQEFNDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVSYDNASSAQ 355
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 356 AAIQTMHGFQIGMKRLKVQLKRSKDACKPY 385
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 63/94 (67%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS+YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSVYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSVYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|21430058|gb|AAM50707.1| GM15173p [Drosophila melanogaster]
Length = 181
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 93 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 152
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLK+ K +KPY
Sbjct: 153 VAIKAMNGFQVGTKRLKVQLKKP-KDSKPY 181
>gi|151936117|gb|ABS18835.1| ELAV-type RNA binding protein variant D [Caenorhabditis elegans]
Length = 327
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
+LR S+GCAF+ + + A+ A + ++ ME
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTME 209
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 327 NSNPSTSSSGGTGP-------PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
++ PST++ P +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 380 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|339252334|ref|XP_003371390.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316968369|gb|EFV52650.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 427
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 67/90 (74%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+SAKVF+D+AT SKCFGFVS+++ SAQ
Sbjct: 338 GPDGCNLFIYHLPQEFGDAELMQMFMPFGPVISAKVFIDRATNQSKCFGFVSFDNAVSAQ 397
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR KPY
Sbjct: 398 AAIHAMNGFQIGMKRLKVQLKRPKDVGKPY 427
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 7/118 (5%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K +E ++ L +G +++ +LRG TSKGCAF
Sbjct: 4 PMQVKPADSESRGEDRKLFVGMLSKQQTEDDLRHLMEPHGHVEECTVLRGPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKM-------EGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K+ +A AA+ A++G M +G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 64 VKFSCHLEAQAAIAALHGSQTMPVSWFECKGASSSLVVKFADTEKERQLRRMQQMAAQ 121
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K TE L + + V+E +++ D T S+GC FV
Sbjct: 11 DSESRGEDRKLFVGMLSKQQTEDDLRHLMEPHGHVEECTVLRGPDGT---SKGCAFVKFS 67
Query: 65 SRQEADKAVNACHNKKTLP-------GASSPLQVKYADGELER 100
EA A+ A H +T+P GASS L VK+AD E ER
Sbjct: 68 CHLEAQAAIAALHGSQTMPVSWFECKGASSSLVVKFADTEKER 110
>gi|158288347|ref|XP_310221.4| AGAP009477-PA [Anopheles gambiae str. PEST]
gi|157019207|gb|EAA05917.4| AGAP009477-PA [Anopheles gambiae str. PEST]
Length = 373
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 69/90 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++ +SAQ
Sbjct: 284 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVVSAKVFIDKQTNLSKCFGFVSFDNVSSAQ 343
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR +KPY
Sbjct: 344 AAIQAMHGFQIGTKRLKVQLKRSKDASKPY 373
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEA 162
KLF+GML K +E +V LFS +GTI++ +LR SKGCAF+ + TK+ A+ A++
Sbjct: 1 RKLFVGMLSKKYNENDVRQLFSGHGTIEECTVLRDPSGQSKGCAFVTFATKQAAIGAIKV 60
Query: 163 --INGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
++ MEG S PLVVK+ADT+KE+ A+R Q+ Q+
Sbjct: 61 SQLHQSKTMEGCSAPLVVKFADTQKEKDAKRMQQMQT 97
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA--V 73
KLFVG + K E + +F ++E +++D + + S+GC FV ++Q A A V
Sbjct: 2 KLFVGMLSKKYNENDVRQLFSGHGTIEECTVLRDPSGQ-SKGCAFVTFATKQAAIGAIKV 60
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
+ H KT+ G S+PL VK+AD + E+
Sbjct: 61 SQLHQSKTMEGCSAPLVVKFADTQKEK 87
>gi|351705590|gb|EHB08509.1| CUG-BP- and ETR-3-like factor 5 [Heterocephalus glaber]
Length = 106
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 17 GPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQ 76
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR PY
Sbjct: 77 TAIQAMNGFQIGMKRLKVQLKRPKDLGHPY 106
>gi|126649123|ref|XP_001388078.1| RNA binding protein [Cryptosporidium parvum Iowa II]
gi|126117166|gb|EAZ51266.1| RNA binding protein, putative [Cryptosporidium parvum Iowa II]
Length = 906
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 109/195 (55%), Gaps = 13/195 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+++ E L +FK + V V++I++K+T RG V S +AD A+
Sbjct: 306 IKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALR 365
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ K L PL+V+Y+ GE ERL + KLF+G LP+N+ E E+ L
Sbjct: 366 ELNSIKVLDELRGPLKVQYSTGEPERLGFESESCIPGVDQVKLFVGALPRNIIEDEIREL 425
Query: 123 FSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YG I ++ I+R KGCAF+KY KEQ L A+++++G + + P+ V++A
Sbjct: 426 FSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALTLADVNRPIEVRFA 485
Query: 182 DTEKERQARRAQKAQ 196
+ + AQ
Sbjct: 486 SKNHQSSTSSSLIAQ 500
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
GPPGAN+FI+++P E+ + L F FG +LSA + VDK +G +K FVSY++ SA
Sbjct: 730 VGPPGANIFIFNVPYEWDKKSLVGLFCRFGNILSAHLMVDKTSGRNKGVAFVSYDNIHSA 789
Query: 398 QNAIAMMNG-CQLGGKKLKVQLKR 420
A+ MNG G+KLKV +K+
Sbjct: 790 AEAVNHMNGFITEQGRKLKVSIKQ 813
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAA 159
+E KLF+G +P+N+ E ++ LF +YG + ++ ++R S +G A + E+ QA A
Sbjct: 304 VEIKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFA 363
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
L +N ++ PL V+++ E ER ++ +P D Q GALP
Sbjct: 364 LRELNSIKVLDELRGPLKVQYSTGEPERLGFESESC------IPGVD-QVKLFVGALP 414
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 50/82 (60%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLFVG +P+++ E ++ +F + ++E+ I+++ + +GC FV +++ A
Sbjct: 404 DQVKLFVGALPRNIIEDEIRELFSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFA 463
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + H TL + P++V++A
Sbjct: 464 IKSLHGALTLADVNRPIEVRFA 485
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
LF+ +P+ + +L + F+ +GRV++ V +K+TG+ + V+ ES A A A+ +
Sbjct: 308 LFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALREL 367
Query: 405 NGCQL 409
N ++
Sbjct: 368 NSIKV 372
>gi|118402071|ref|XP_001033355.1| hypothetical protein TTHERM_00421000 [Tetrahymena thermophila]
gi|89287703|gb|EAR85692.1| hypothetical protein TTHERM_00421000 [Tetrahymena thermophila
SB210]
Length = 307
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQ+PK + Q+ F +F + EV II+D + +GC FV S +A+KA+
Sbjct: 54 LKLFVGQLPKTWEKEQVKDFFSKFGRIYEVQIIRDNKGQ-HKGCAFVKFASMTDAEKAIE 112
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSALFSIYGT 128
A N T PG + +++K+AD E ERL +HKLFIG LPK+ +E + +F +G
Sbjct: 113 AVKNT-TFPGMKNNVEIKWADNEEERLGVNQDSDHKLFIGSLPKSCTEQNIKDIFEFFGE 171
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
I++L +++ +QQ ++ AFLK++ KE+A A+ +N + + + P+ V++A
Sbjct: 172 IEELHLMKDNQQNTRQ-AFLKFKQKEKAHLAIRNLNSQVYINDAENPIEVRFA 223
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+G LPK + +V FS +G I ++QI+R ++ KGCAF+K+ + A A+EA+
Sbjct: 55 KLFVGQLPKTWEKEQVKDFFSKFGRIYEVQIIRDNKGQHKGCAFVKFASMTDAEKAIEAV 114
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
G + +KWAD E+ER N DS H G+LP
Sbjct: 115 KNT-TFPGMKNNVEIKWADNEEERLG-------------VNQDSDHKLFIGSLP 154
>gi|269868148|gb|ACZ52380.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KV +D+AT SKCFGFVS+++PASA
Sbjct: 291 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVSIDRATNQSKCFGFVSFDNPASA 350
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 351 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 381
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868309|gb|ACZ52459.1| Bruno-3 transcript variant 16 [Drosophila persimilis]
Length = 367
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 69/91 (75%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEF D EL F FG V+ +KVF+D+AT SKCFGFVS+++PASA
Sbjct: 277 SGPEGCNLFIYHLPQEFCDAELMQMFLPFGNVIGSKVFIDRATNQSKCFGFVSFDNPASA 336
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR ++PY
Sbjct: 337 QAAIQAMNGFQIGMKRLKVQLKRPKDASRPY 367
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
Query: 144 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP 203
GCAF+K+ T+++A +A+ ++G + G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 GCAFVKFGTQQEAQSAIANLHGSQTVPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL- 126
Query: 204 NADSQHPSLF 213
+PS+F
Sbjct: 127 -----NPSVF 131
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%)
Query: 49 DKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
++T GC FV ++QEA A+ H +T+PGASS L VKYAD E ER ++
Sbjct: 60 NRTRDPRGGCAFVKFGTQQEAQSAIANLHGSQTVPGASSSLVVKYADTEKERQIRRMQQM 119
Query: 109 MLPKNVSEAEVSALFSIYG 127
N+ V FS YG
Sbjct: 120 AGHMNLLNPSVFNQFSPYG 138
>gi|120419456|gb|ABM21547.1| trinucleotide repeat containing 4 [Bos taurus]
Length = 139
Score = 119 bits (298), Expect = 3e-24, Method: Composition-based stats.
Identities = 59/133 (44%), Positives = 86/133 (64%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGC 145
+LRG TSKGC
Sbjct: 125 TVLRGPDGTSKGC 137
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ + + G + P+ VK AD+E + R+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGEDRK 96
Score = 41.6 bits (96), Expect = 0.82, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P LF+ IP+ +++L F+ FGR+ V DK TG+ K F++Y + SA
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 400 A-IAMMNGCQLGGKKLKVQLKRDNKQNK 426
A A+ L G +Q+K + +++
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPADSESR 91
>gi|328722645|ref|XP_003247623.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Acyrthosiphon pisum]
Length = 437
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQ+F D +L F FG V+SAKV++DK T +SKCFGFVSY++ SAQ
Sbjct: 348 GPEGANLFIYHLPQDFADSDLVTMFLPFGNVISAKVYIDKETKLSKCFGFVSYDNAYSAQ 407
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MN Q+G K+LKVQLKR + ++PY
Sbjct: 408 AAIQTMNSYQVGNKRLKVQLKRPKEASRPY 437
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLFIGML K +SE ++ +F +G I++ +LR SKGCAF+ Y TK+ A+AA++
Sbjct: 7 ERKLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPNGVSKGCAFVTYTTKQNAIAAIK 66
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
++ MEG + PLVVK+ADT+KE+ +R Q+ Q+
Sbjct: 67 GMHHSQTMEGCTCPLVVKFADTQKEKDQKRMQQMQA 102
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+S ER KLF+G + K ++E + MF+ F ++E ++++D S+GC FV ++Q A
Sbjct: 4 ASPER-KLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPN-GVSKGCAFVTYTTKQNA 61
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ H+ +T+ G + PL VK+AD + E+ + ++
Sbjct: 62 IAAIKGMHHSQTMEGCTCPLVVKFADTQKEKDQKRM 97
>gi|294884851|gb|ADF47436.1| trinucleotide repeat containing 4-like protein [Dugesia japonica]
Length = 460
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 2/93 (2%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
TGP G+N+FIYH+PQEFGD EL F FG V+SAKV++D+AT SKCFGFVS+++ SA
Sbjct: 368 TGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSA 427
Query: 398 QNAIAMMNGCQLGGKKLKVQLKR--DNKQNKPY 428
Q AI MNG Q+G K+LKVQLKR KPY
Sbjct: 428 QAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 460
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLFIGML K +E +V +F +G I++ ILR SKGCAF+KY T+ +A A+
Sbjct: 48 DRKLFIGMLGKQHTEDDVRDMFKPFGMIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIG 107
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
A++G + G+S LVVK+ADTEKERQ R+ Q+
Sbjct: 108 AMHGSMTIPGASSSLVVKFADTEKERQTRKLQQ 140
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 5 KKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICP 64
K+ + E+R KLF+G + K TE + MFK F +++E I++D+ S+GC FV
Sbjct: 40 KQTQHKGEDR-KLFIGMLGKQHTEDDVRDMFKPFGMIEECTILRDQNGN-SKGCAFVKYT 97
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+R EA A+ A H T+PGASS L VK+AD E ER KL
Sbjct: 98 TRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 138
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 105 LFIGMLPKNVSEAEVSALFSIYGTI--KDLQILRGSQQTSKGCAFLKYETKEQALAALEA 162
+FI LP+ +AE++ +FS +GT+ + I R + Q SK F+ ++ A AA++A
Sbjct: 375 VFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQ-SKCFGFVSFDNSNSAQAAIQA 433
Query: 163 ING 165
+NG
Sbjct: 434 MNG 436
>gi|440800621|gb|ELR21657.1| CUGbinding protein LYLQ isoform, putative [Acanthamoeba castellanii
str. Neff]
Length = 106
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
Query: 337 GTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPAS 396
G GPPGANLFIYH+P FGD +L + F +G+++SAKVF+DKATG SKCFGFVSY PA+
Sbjct: 17 GEGPPGANLFIYHLPPHFGDSDLYSHFAPYGQLVSAKVFIDKATGQSKCFGFVSYSMPAA 76
Query: 397 AQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
A+ AI MNG Q+ GK+L+VQ KR Q PY
Sbjct: 77 AEMAIQQMNGFQVAGKRLRVQHKRSRAQ--PY 106
>gi|195117928|ref|XP_002003497.1| GI17946 [Drosophila mojavensis]
gi|193914072|gb|EDW12939.1| GI17946 [Drosophila mojavensis]
Length = 580
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 45/185 (24%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L +F++F V +N+++DK T SR
Sbjct: 298 DNIKMFVGQIPKTWDELKLRRLFEQFGRVHTLNVLRDKVTSISR---------------- 341
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 342 -----------------------------ERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 372
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 373 TVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 432
Query: 193 QKAQS 197
Q+ Q+
Sbjct: 433 QQLQA 437
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++Q A
Sbjct: 340 SRER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQVGQ-SKGCAFVTFATKQNAI 397
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 398 GAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 432
>gi|118404110|ref|NP_001072378.1| CUGBP Elav-like family member 4 [Xenopus (Silurana) tropicalis]
gi|123914769|sp|Q0V9L3.1|CELF4_XENTR RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|111305714|gb|AAI21491.1| bruno-like 4, RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 424
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 96/188 (51%), Gaps = 43/188 (22%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 43 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 102
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E
Sbjct: 103 KAQSALHEQKTLPGMNRPIQVKPADSE--------------------------------- 129
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ GCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 130 ----------SRGGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 179
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 180 RMQQMAGQ 187
>gi|321461452|gb|EFX72484.1| hypothetical protein DAPPUDRAFT_9147 [Daphnia pulex]
Length = 83
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 66/82 (80%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 1 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQ 60
Query: 399 NAIAMMNGCQLGGKKLKVQLKR 420
AI MNG Q+G K+LKVQLKR
Sbjct: 61 AAIQAMNGFQIGMKRLKVQLKR 82
>gi|209879588|ref|XP_002141234.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556840|gb|EEA06885.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 517
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV +VPK M L+ +F ++ +V E NII+D + +GC FV + EA A+
Sbjct: 199 VKLFVNRVPKWMRNEDLMKIFSKYGVVVECNIIRD--SNGPKGCAFVRFATIVEAQNAIL 256
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
H K L + P+QVKYADGE+ERL K+F+G LPK +EAE+ LF
Sbjct: 257 CIHGKTVLNEEAGPIQVKYADGEIERLGLSPDVQPCGESVKVFVGCLPKTCTEAELLTLF 316
Query: 124 SIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
+G + ++ I+R + SK AF+ + + A A+ ++ K+ ++ P+ V+ A
Sbjct: 317 RRFGHVDEVHIIRDDNRQSKCSAFVTFPKRYMAENAIVFLDKKYILDNGKRPIEVRLA-- 374
Query: 184 EKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLP 243
R + ++ S NN+ + P L P YN SG+Y R+
Sbjct: 375 ---RSRSKQKQLSSNHNNVRRTN--EPKLTNTNPNNNTNSYNILN--NSGNYSNASGRMQ 427
Query: 244 PMQN 247
M N
Sbjct: 428 NMDN 431
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E VK+FVG +PK TEA+LL +F+ F VDEV+II+D R S+ FV P R A+ A
Sbjct: 294 ESVKVFVGCLPKTCTEAELLTLFRRFGHVDEVHIIRDD-NRQSKCSAFVTFPKRYMAENA 352
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ K L P++V+ A
Sbjct: 353 IVFLDKKYILDNGKRPIEVRLA 374
>gi|9246975|gb|AAF86231.1|AF248649_1 RNA-binding protein BRUNOL5 [Homo sapiens]
Length = 83
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 66/82 (80%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG ++S+KVF+D+AT SKCFGFVS+++PASAQ
Sbjct: 1 GPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQ 60
Query: 399 NAIAMMNGCQLGGKKLKVQLKR 420
AI MNG Q+G K+LKVQLKR
Sbjct: 61 AAIQAMNGFQIGMKRLKVQLKR 82
>gi|195117930|ref|XP_002003498.1| GI17947 [Drosophila mojavensis]
gi|193914073|gb|EDW12940.1| GI17947 [Drosophila mojavensis]
Length = 93
Score = 117 bits (294), Expect = 1e-23, Method: Composition-based stats.
Identities = 57/91 (62%), Positives = 68/91 (74%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
TGP G+NLFIYH+PQEF D +L + F FG VLSAKVF+DK T +SKCFGFVSY++ SA
Sbjct: 3 TGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNRHSA 62
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI M+G Q+G K+LKVQLKR KPY
Sbjct: 63 DAAIQAMHGFQIGTKRLKVQLKRPKDLGKPY 93
>gi|401405877|ref|XP_003882388.1| putative RNA binding protein [Neospora caninum Liverpool]
gi|325116803|emb|CBZ52356.1| putative RNA binding protein [Neospora caninum Liverpool]
Length = 1060
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 33/212 (15%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG++P +TE L +F +F + ++ +I+D+ T A +GC FV S +AD+A+
Sbjct: 101 IKLFVGRLPLTVTEEMLCTLFSQFGPIADLLLIRDRHTNAFKGCAFVRMQSITDADRAIR 160
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAEV 119
+ L A LQVKYA GE ERL + KLF+G LP ++ E +
Sbjct: 161 HLDSAYVLDPALGGLQVKYAVGEAERLGLPGTSGSGAAAGVDQVKLFVGSLPPDIKEDAL 220
Query: 120 SALFSIYGTIKDLQILRGSQ----------------QTSKGCAFLKYETKEQALAALEAI 163
LF +G ++++ ++R Q ++ GCAF+++ KE+AL A+ +
Sbjct: 221 RDLFERFGRVEEVFLMRDDQPLSGNHLGGGAAKPGKKSRTGCAFVRFAYKEEALFAIGEL 280
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKA 195
NGK M GS + V++A E R + AQ A
Sbjct: 281 NGKFVMPGSQRAMEVRFA--ENRRSSSSAQGA 310
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 61/86 (70%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GPPGAN+FI+HIP E+ + +L F +G VLSA++ D+ +G ++ FGFVS+ + +A
Sbjct: 783 GPPGANVFIFHIPNEWSEHDLLTHFSVYGPVLSARIASDRLSGRNRGFGFVSFANGQAAA 842
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQ 424
A+ MNG Q+ GK+LKVQ+K+ +Q
Sbjct: 843 AAVTAMNGFQVNGKRLKVQIKKGEEQ 868
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKD--------------KTTRASR-G 57
++VKLFVG +P + E L +F+ F V+EV +++D K + SR G
Sbjct: 202 DQVKLFVGSLPPDIKEDALRDLFERFGRVEEVFLMRDDQPLSGNHLGGGAAKPGKKSRTG 261
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEA 117
C FV ++EA A+ + K +PG+ ++V++A+ R G P + + +
Sbjct: 262 CAFVRFAYKEEALFAIGELNGKFVMPGSQRAMEVRFAE---NRRSSSSAQGAAPASRTAS 318
Query: 118 EVSALFSIYGTIKDLQILRGSQQ-----TSKGC----AFLKYETKEQALAALEAINGKHK 168
S S + + L G+ + S C ++ ++ L L ++G+H
Sbjct: 319 ASSCFMSSMDSSRGGSALPGADEYPENVRSTSCFPSRVDMERFSRMDPLDVLSCLDGRHD 378
Query: 169 -MEGSSVPLVV 178
G+S L +
Sbjct: 379 CFSGTSESLAI 389
>gi|269868247|gb|ACZ52428.1| Bruno-3 transcript variant 17 [Drosophila melanogaster]
Length = 335
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 84/136 (61%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 213 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 259
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT +SKCFGFVS+++PASAQ AI
Sbjct: 260 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNLSKCFGFVSFDNPASAQAAI 319
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 320 QAMNGFQIGMKRLKVQ 335
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G + G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTIPGASSSLVVKYADTEKERQI 65
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTIPGASSSLVVKYADTEKER 63
>gi|281500590|pdb|2KHC|A Chain A, Bruno Rrm3+
Length = 118
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 65/82 (79%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVS+++P SAQ
Sbjct: 37 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQ 96
Query: 399 NAIAMMNGCQLGGKKLKVQLKR 420
AI MNG Q+G K+LKVQLK+
Sbjct: 97 VAIKAMNGFQVGTKRLKVQLKK 118
>gi|195427147|ref|XP_002061640.1| GK17101 [Drosophila willistoni]
gi|194157725|gb|EDW72626.1| GK17101 [Drosophila willistoni]
Length = 645
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 85/140 (60%), Gaps = 14/140 (10%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 324 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 370
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 371 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 430
Query: 402 AMMNGCQLGGKKLKVQLKRD 421
MNG Q+G K+LK LKR+
Sbjct: 431 QAMNGFQIGMKRLKF-LKRN 449
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 5/132 (3%)
Query: 76 CHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
CH+ P + LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI+
Sbjct: 57 CHHPLIPPAIKLMNRTLQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFQPFGTIE 116
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ R
Sbjct: 117 ECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIR 176
Query: 191 RAQKAQSQANNL 202
R Q+ N L
Sbjct: 177 RMQQMAGHMNLL 188
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F+ F ++E I++ AS+GC FV
Sbjct: 78 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFQPFGTIEECTILRGPDG-ASKGCAFVKF 136
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 137 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 173
>gi|269868235|gb|ACZ52422.1| Bruno-3 transcript variant 4 [Drosophila melanogaster]
Length = 380
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 83/136 (61%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 258 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 304
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 305 GCNLFIYHLPQEFGDVELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 364
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 365 QAMNGFQIGMKRLKVQ 380
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|47212399|emb|CAF96701.1| unnamed protein product [Tetraodon nigroviridis]
Length = 795
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 62/77 (80%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+PQEFGDQ++ F FG V+SAKVF+DK T +SKCFGFVSY++P SAQ
Sbjct: 640 GPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 699
Query: 399 NAIAMMNGCQLGGKKLK 415
AI MNG Q+G K+LK
Sbjct: 700 AAIQAMNGFQIGMKRLK 716
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 88 PLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I++ +ILRG S+GC
Sbjct: 159 PIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGC 218
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNA 205
AF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ RR Q+ +Q N+
Sbjct: 219 AFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNS 278
Query: 206 DSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
+ SL G G P Y QA+ S L
Sbjct: 279 ATTWGSLTGL--GGLTPQYLALLQQAASSGNL 308
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 162 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 220
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 221 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 260
>gi|269868218|gb|ACZ52415.1| Bruno-3 transcript variant 1, partial [Drosophila pseudoobscura]
Length = 415
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 83/136 (61%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 293 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 339
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ A+
Sbjct: 340 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAV 399
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 400 QAMNGFQIGMKRLKVQ 415
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 21/135 (15%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKME-------------------GSSVPLVVKWADTEKER 187
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKER
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPVCTTNLHSSKDINPLPYSGGASSSLVVKYADTEKER 144
Query: 188 QARRAQKAQSQANNL 202
Q RR Q+ N L
Sbjct: 145 QIRRMQQMAGHMNLL 159
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 24/118 (20%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLP-------------------GASSPLQVKYADGELER 100
++QEA A+ H +T+P GASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPVCTTNLHSSKDINPLPYSGGASSSLVVKYADTEKER 144
>gi|269868222|gb|ACZ52417.1| Bruno-3 transcript variant 17, partial [Drosophila pseudoobscura]
Length = 351
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 83/136 (61%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 229 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 275
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 276 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 335
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 336 QAMNGFQIGMKRLKVQ 351
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|391325662|ref|XP_003737349.1| PREDICTED: uncharacterized protein LOC100908759 [Metaseiulus
occidentalis]
Length = 373
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQ+FGD ++ F FG V+SAKVF+DK T +SKCFGFVSY + AQ
Sbjct: 280 GPEGSNLFIYHLPQDFGDNDMVQLFMPFGEVISAKVFIDKHTQLSKCFGFVSYSNAIHAQ 339
Query: 399 NAIAMMNGCQLGGKKLKVQLKR 420
AI +NG Q+G K+LKVQLKR
Sbjct: 340 AAIKALNGFQIGTKRLKVQLKR 361
>gi|269868259|gb|ACZ52434.1| Bruno-3 transcript variant 32 [Drosophila melanogaster]
Length = 154
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 75 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 134
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 135 QAAIQAMNGFQIGMKRLKVQ 154
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK 143
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SK
Sbjct: 8 LQLKPAENESHSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASK 64
>gi|356503942|ref|XP_003520758.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 496
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 44/271 (16%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
K++V VP+ TE ++ +F+E + E+ ++K K T +G CFV + EAD+A+
Sbjct: 74 KVYVAPVPRTATEDEIRPVFEEHGTIVEIVLLKHKKTGTRQGSCFVKYATFDEADRAIKV 133
Query: 76 CHNKKTLPGASSPLQVKYADGELERL------------------EHKLFIGMLPKNVSEA 117
+NK T G S P+ VK+AD ELERL K+F+ + K +
Sbjct: 134 LNNKYTFAGESYPVVVKFADRELERLGVRGLCRNMEKKDPLEEVADKVFVSSINKEATNK 193
Query: 118 EVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177
++ +FS YG ++D+ +++ G AF+K+ +E ALAA++ +N M G PL+
Sbjct: 194 DIEEIFSPYGHVEDIFF-----KSTHGYAFVKFSNREMALAAIKGLNKTFTMRGCDHPLI 248
Query: 178 VKWADTEKERQAR-RAQKAQSQANNLPNADSQHPSLF----------GALPMGYAPPYNG 226
V++AD +K + R AN P SQ P+++ G + + +AP ++
Sbjct: 249 VRFADPKKPKTGESRGNYLSVNANFGPC--SQEPAVWPLPNFGDSNTGGIILPHAPYHST 306
Query: 227 YGYQASGSY--------GLMQYRLPPMQNQP 249
+ S+ ++Q+ PP Q P
Sbjct: 307 IAHPQVTSHMQNWEPGATVLQHPFPPHQVHP 337
>gi|269868261|gb|ACZ52435.1| Bruno-3 transcript variant 33 [Drosophila melanogaster]
Length = 109
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 30 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 89
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 90 QAAIQAMNGFQIGMKRLKVQ 109
>gi|269868271|gb|ACZ52440.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 82/136 (60%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 257 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 303
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PA AQ AI
Sbjct: 304 GCNLFIYHLPQEFGDAELMQVFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPAGAQAAI 363
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 364 QAMNGFQIGMKRLKVQ 379
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|297824821|ref|XP_002880293.1| hypothetical protein ARALYDRAFT_483907 [Arabidopsis lyrata subsp.
lyrata]
gi|297326132|gb|EFH56552.1| hypothetical protein ARALYDRAFT_483907 [Arabidopsis lyrata subsp.
lyrata]
Length = 505
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 101/181 (55%), Gaps = 9/181 (4%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K TE + +F+ + V E+ + KDK T CFV + +E + A+ A
Sbjct: 110 KLYVAPISKTSTEYDIRQVFETYGNVTEIILPKDKMTGDRAAYCFVKYKTVEEGNAAIAA 169
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFSIY 126
+ T PG PL+V++AD E ER+ KL+I L K ++ EV +FS +
Sbjct: 170 LAEQFTFPGEMLPLKVRFADAERERIGFAPVQPPDNPKLYIRCLNKQTTKMEVHEVFSRF 229
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I+D+ + + S+G AF+++ +E ALAA++ +NG M GS PL+V++AD +K
Sbjct: 230 GIIEDIYMALDDMKISRGYAFVQFSCREMALAAIKGLNGVFTMRGSDQPLIVRFADPKKP 289
Query: 187 R 187
R
Sbjct: 290 R 290
>gi|269868227|gb|ACZ52419.1| Bruno-3 transcript variant 5, partial [Drosophila pseudoobscura]
Length = 390
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 79/128 (61%), Gaps = 11/128 (8%)
Query: 291 GYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGG-TGPPGANLFIYH 349
G P PG+ +P Y P ++ P +A P+ +GP G NLFIYH
Sbjct: 273 GLPPFPGVAFPAVY----------GQFPQALPPPLAAVAPTQREGCSISGPEGCNLFIYH 322
Query: 350 IPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQL 409
+PQ FGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI MNG Q+
Sbjct: 323 LPQGFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI 382
Query: 410 GGKKLKVQ 417
G K+LKVQ
Sbjct: 383 GMKRLKVQ 390
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGELE--RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSGHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSGHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868267|gb|ACZ52438.1| Bruno-3 transcript variant 4 [Drosophila virilis]
gi|269868269|gb|ACZ52439.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 82/136 (60%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 257 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 303
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 304 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAI 363
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 364 QAMNGFQIGMKRLKVQ 379
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868214|gb|ACZ52413.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 291 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 350
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 351 QAAIQAMNGFQIGMKRLKVQ 370
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868210|gb|ACZ52411.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 291 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 350
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 351 QAAIQAMNGFQIGMKRLKVQ 370
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|383860257|ref|XP_003705607.1| PREDICTED: CUGBP Elav-like family member 2-like [Megachile
rotundata]
Length = 443
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQ+F D +L F FG V+SAKVF+DK T +SKCFGFVSY++ ASAQ
Sbjct: 354 GPEGCNLFIYHLPQQFSDTDLVTTFLPFGNVISAKVFIDKQTQLSKCFGFVSYDNAASAQ 413
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR +KPY
Sbjct: 414 AAIQAMNGFQIGMKRLKVQLKRSKDASKPY 443
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 70/101 (69%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K +E +V +FS+YGTI++ +LR S SK CAF+ + +K+ A+ A++
Sbjct: 10 ERKLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIK 69
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A++ MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 70 ALHHSQTMEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 110
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ER KLFVG + K TE + MF + ++E ++++D T + S+ C FV S+Q A A
Sbjct: 10 ER-KLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGK-SKACAFVTFASKQYAINA 67
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 68 IKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 100
>gi|269868265|gb|ACZ52437.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 82/136 (60%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 257 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPV 303
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 304 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAI 363
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 364 QAMNGFQIGMKRLKVQ 379
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868239|gb|ACZ52424.1| Bruno-3 transcript variant 7 [Drosophila melanogaster]
Length = 362
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 283 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 342
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 343 QAAIQAMNGFQIGMKRLKVQ 362
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 89 LQVKYAD--GELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENVSRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S KLFVG + K TE + +F F ++E I++ AS+GC FV S+QE
Sbjct: 18 RSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKFGSQQE 76
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGT 128
A A+ H +T+PGASS L VKYAD E ER ++ N+ V FS YG
Sbjct: 77 AQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQFSPYGA 136
Query: 129 IKDL 132
L
Sbjct: 137 YAQL 140
>gi|269868212|gb|ACZ52412.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 291 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 350
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 351 QAAIQAMNGFQIGMKRLKVQ 370
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868237|gb|ACZ52423.1| Bruno-3 transcript variant 7, partial [Drosophila melanogaster]
Length = 362
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 283 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 342
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 343 QAAIQAMNGFQIGMKRLKVQ 362
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 131
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 132 SPYGAYAQL 140
>gi|269868245|gb|ACZ52427.1| Bruno-3 transcript variant 9 [Drosophila melanogaster]
Length = 354
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 275 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 334
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 335 QAAIQAMNGFQIGMKRLKVQ 354
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868243|gb|ACZ52426.1| Bruno-3 transcript variant 9 [Drosophila melanogaster]
Length = 354
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 275 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 334
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 335 QAAIQAMNGFQIGMKRLKVQ 354
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQKAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+Q+A A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQKAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868251|gb|ACZ52430.1| Bruno-3 transcript variant 28 [Drosophila melanogaster]
Length = 309
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 230 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 289
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 290 QAAIQAMNGFQIGMKRLKVQ 309
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 65
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|269868206|gb|ACZ52409.1| Bruno-3 transcript variant 28, partial [Drosophila pseudoobscura]
Length = 325
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 246 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 305
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 306 QAAIQAMNGFQIGMKRLKVQ 325
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868225|gb|ACZ52418.1| Bruno-3 transcript variant 17 [Drosophila pseudoobscura]
Length = 351
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 83/136 (61%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 229 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 275
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA+ AI
Sbjct: 276 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASARAAI 335
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 336 QAMNGFQIGMKRLKVQ 351
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 23 RALQLKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQI 82
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 83 RRMQQMAGHMNLL 95
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV ++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 27 LKPAENESRSGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 80
>gi|269868281|gb|ACZ52445.1| Bruno-3 transcript variant 9 [Drosophila virilis]
Length = 353
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F +FG V+S+KVF+D+AT SKCFGFVS+++P SA
Sbjct: 274 SGPEGCNLFIYHLPQEFGDAELMQMFLSFGNVISSKVFIDRATNQSKCFGFVSFDNPTSA 333
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 334 QAAIQAMNGFQIGMKRLKVQ 353
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868253|gb|ACZ52431.1| Bruno-3 transcript variant 28 [Drosophila melanogaster]
Length = 309
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 230 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 289
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 290 QAAIQAMNGFQIGMKRLKVQ 309
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|357622928|gb|EHJ74277.1| hypothetical protein KGM_22147 [Danaus plexippus]
Length = 238
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 340 PPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQN 399
P G NLFIYH+PQEF D +L + F FG V+SAKVF+DK T +SKCFGFVSY++ ASAQ
Sbjct: 150 PEGGNLFIYHLPQEFTDTDLASTFLPFGHVISAKVFIDKQTNLSKCFGFVSYDNAASAQA 209
Query: 400 AIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR + ++PY
Sbjct: 210 AIQAMNGFQIGTKRLKVQLKRSKELSRPY 238
>gi|269868285|gb|ACZ52447.1| Bruno-3 transcript variant 17 [Drosophila virilis]
Length = 334
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 82/136 (60%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 212 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 258
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 259 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAI 318
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 319 QAMNGFQIGMKRLKVQ 334
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 65
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|269868249|gb|ACZ52429.1| Bruno-3 transcript variant 26 [Drosophila melanogaster]
Length = 317
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 238 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVVSSKVFIDRATNQSKCFGFVSFDNPASA 297
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 298 QAAIQAMNGFQIGMKRLKVQ 317
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ + GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENGSRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 65
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENGSRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|269868257|gb|ACZ52433.1| Bruno-3 transcript variant 31 [Drosophila melanogaster]
Length = 293
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASA
Sbjct: 214 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASA 273
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 274 QAAIQAMNGFQIGMKRLKVQ 293
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN 200
TS CAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N
Sbjct: 1 TSYCCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMN 60
Query: 201 NL 202
L
Sbjct: 61 LL 62
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 54 ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S C FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 1 TSYCCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 47
>gi|269868220|gb|ACZ52416.1| Bruno-3 transcript variant 4, partial [Drosophila pseudoobscura]
Length = 396
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 82/136 (60%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 274 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 320
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++PASAQ AI
Sbjct: 321 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAI 380
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+ KVQ
Sbjct: 381 QAMNGFQIGMKRPKVQ 396
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ +LRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTVLRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR + N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMHQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E +++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTVLRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSA 121
++QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMHQMAGHMNLLNPFVFN 146
Query: 122 LFSIYG 127
FS YG
Sbjct: 147 QFSPYG 152
>gi|269868233|gb|ACZ52421.1| Bruno-3 transcript variant 4 [Drosophila melanogaster]
Length = 380
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 82/136 (60%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 258 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 304
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+ +AT SKCFGFVS+++PASAQ AI
Sbjct: 305 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIGRATNQSKCFGFVSFDNPASAQAAI 364
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 365 QAMNGFQIGMKRLKVQ 380
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V + +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESHSEHLDRKLFVGMLSKQQTEDDVRQISHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E S KLFVG + K TE + + F ++E I++ AS+GC FV
Sbjct: 13 AENESHSEHLDRKLFVGMLSKQQTEDDVRQISHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|357511413|ref|XP_003625995.1| FCA-like protein [Medicago truncatula]
gi|355501010|gb|AES82213.1| FCA-like protein [Medicago truncatula]
Length = 569
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 107/191 (56%), Gaps = 22/191 (11%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
VK++V VP+ +EA + +F+ + + EV +++DK T +G C V + EAD A+
Sbjct: 73 HVKVYVAPVPRTASEADVRLVFQGYGTIVEVVLLRDKATGVRQGSCLVKYSTFDEADMAI 132
Query: 74 NACHNKKTLPGASSPLQVKYADGELER---------LEH--------KLFIGMLPKNVSE 116
A N+ T PG SSP+ V++AD + ER +E K+++G + S+
Sbjct: 133 KALSNQYTFPGESSPVVVRFADRKRERFGLRDFCQNMERRDPPEVVGKVYVGCINNEASK 192
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
E+ +FS YG I+D+ +LR ++G F+K+ +E ALAA++ ++ M G PL
Sbjct: 193 QEIEEIFSPYGHIEDVVVLR-----NRGYGFVKFYNREMALAAIKGLDRTFTMRGCDQPL 247
Query: 177 VVKWADTEKER 187
+V++A+ +K R
Sbjct: 248 IVRFAEPKKPR 258
>gi|269868241|gb|ACZ52425.1| Bruno-3 transcript variant 8 [Drosophila melanogaster]
Length = 356
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 63/80 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+ T SKCFGFVS+++PASA
Sbjct: 277 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRTTNQSKCFGFVSFDNPASA 336
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 337 QAAIQAMNGFQIGMKRLKVQ 356
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 70/104 (67%)
Query: 99 ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALA 158
E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +
Sbjct: 14 EHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQS 73
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 74 AITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 117
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 7 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 65
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 66 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 125
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 126 SPYGAYAQL 134
>gi|269868301|gb|ACZ52455.1| Bruno-3 transcript variant 30 [Drosophila virilis]
Length = 302
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 63/80 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SA
Sbjct: 223 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSA 282
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 283 QAAIQAMNGFQIGMKRLKVQ 302
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|269868263|gb|ACZ52436.1| Bruno-3 transcript variant 33 [Drosophila melanogaster]
Length = 109
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 63/80 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G LFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFGFVS+++PASA
Sbjct: 30 SGPEGCKLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASA 89
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 90 QAAIQAMNGFQIGMKRLKVQ 109
>gi|294464552|gb|ADE77786.1| unknown [Picea sitchensis]
Length = 101
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 68/92 (73%), Gaps = 6/92 (6%)
Query: 302 MPYPGGMLGHRPLNNSPGSVSPAVANSNPST----SSSGG--TGPPGANLFIYHIPQEFG 355
M Y G M+G L GSV PA+ N+N + +SSG GPPGANLFIYHIPQEFG
Sbjct: 1 MGYQGAMMGPAALPVGHGSVGPAMVNANSAAGNVKTSSGAQVEGPPGANLFIYHIPQEFG 60
Query: 356 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 387
DQEL NAF +FG+V+SAKVFVDKATGVSKCFG
Sbjct: 61 DQELSNAFSSFGKVISAKVFVDKATGVSKCFG 92
>gi|269868279|gb|ACZ52444.1| Bruno-3 transcript variant 9 [Drosophila virilis]
Length = 353
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 63/80 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SA
Sbjct: 274 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSA 333
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 334 QAAIQAMNGFQIGMKRLKVQ 353
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868295|gb|ACZ52452.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 307
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 63/80 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SA
Sbjct: 228 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSA 287
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 288 QAAIQAMNGFQIGMKRLKVQ 307
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 9 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 62
>gi|269868293|gb|ACZ52451.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 307
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 63/80 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SA
Sbjct: 228 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSA 287
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 288 QAAIQAMNGFQIGMKRLKVQ 307
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 9 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 62
>gi|269868291|gb|ACZ52450.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 307
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 63/80 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SA
Sbjct: 228 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSA 287
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 288 QAAIQAMNGFQIGMKRLKVQ 307
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 9 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 62
>gi|431896232|gb|ELK05648.1| CUG-BP- and ETR-3-like factor 4 [Pteropus alecto]
Length = 379
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 4/90 (4%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT S FVS+++PASAQ
Sbjct: 294 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQS----FVSFDNPASAQ 349
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 350 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 379
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S++R KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 26 SQDR-KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQ 83
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 84 AAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 118
>gi|269868297|gb|ACZ52453.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 308
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 63/80 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SA
Sbjct: 229 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSA 288
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 289 QAAIQAMNGFQIGMKRLKVQ 308
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 31/54 (57%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENEGRSGCAFVKFGSQQEAQSAITNLHGSRTMPGASSSLVVKYADTEKER 63
>gi|269868231|gb|ACZ52420.1| Bruno-3 transcript variant 3 [Drosophila melanogaster]
Length = 388
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 82/136 (60%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 266 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 312
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKC GFVS+++PASAQ AI
Sbjct: 313 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCSGFVSFDNPASAQAAI 372
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 373 QAMNGFQIGMKRLKVQ 388
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 131
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 132 SPYGAYAQL 140
>gi|195126493|ref|XP_002007705.1| GI13095 [Drosophila mojavensis]
gi|193919314|gb|EDW18181.1| GI13095 [Drosophila mojavensis]
Length = 611
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 13/134 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 288 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 334
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SAQ AI
Sbjct: 335 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSAQAAI 394
Query: 402 AMMNGCQLGGKKLK 415
MNG Q+G K+LK
Sbjct: 395 QAMNGFQIGMKRLK 408
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 185/417 (44%), Gaps = 48/417 (11%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ + L V +P+ +TE L +F +F +V +IKDK++ S G FV S +EA+
Sbjct: 20 TKAKTNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVNYGSAEEAE 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEH-KLFIGMLPKNVSEAEVSALFSIYGTI 129
A+ N TL S L+V YA +++ +++ LP +S E+ ALF YGTI
Sbjct: 80 HAIQK-MNGTTL--ESKTLKVSYARPSSVAIKNANVYVANLPPQLSLTELDALFQPYGTI 136
Query: 130 KDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
++L +G F++++ QA A+ A+NGK ++ G + PL+VK+A+ K
Sbjct: 137 ITSKVLTDEDTGAGRGVGFVRFDKYTQAEVAIAALNGK-QLVGGTQPLLVKFANPPKAAT 195
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
AN + + + G+ + Y GS G M++
Sbjct: 196 PLTGTVPGGLANQIMTQTQKRLNNNGSSSSAAS--SMSYTSTNGGSVGPMRH-------- 245
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYP--MPYPG 306
IP V SNM P S +G P G+ P M
Sbjct: 246 ------IPTV--------------SNMRYN----PVSSLPTAGLPTAAGMVNPAAMAALT 281
Query: 307 GMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAF 366
GM P + +++P VA N ST +S G P +F+Y++P+ D L F F
Sbjct: 282 GMTTGVP---NLANLAP-VAGGNGSTMTS--PGDPSYCVFVYNLPETCQDFLLYQLFSPF 335
Query: 367 GRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNK 423
G + S V D +G+ K +GFV+ +S A +AI +NG GK L+V K K
Sbjct: 336 GAITSVNVIRDLKSGLCKRYGFVNMKSYEDACSAIMTLNGYVHDGKTLQVSFKNQKK 392
>gi|269868216|gb|ACZ52414.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 63/80 (78%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFV +++PASA
Sbjct: 291 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVFFDNPASA 350
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K+LKVQ
Sbjct: 351 QAAIQAMNGFQIGMKRLKVQ 370
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868283|gb|ACZ52446.1| Bruno-3 transcript variant 17 [Drosophila virilis]
Length = 334
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 81/136 (59%), Gaps = 13/136 (9%)
Query: 282 MPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPP 341
+PP F G +PAV G Q+P P + P + P + S GP
Sbjct: 212 LPP--FPGVAFPAVYG-QFPQALPPPLAAVAPTQREDFLMFPGCSIS----------GPE 258
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P AQ AI
Sbjct: 259 GCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTGAQAAI 318
Query: 402 AMMNGCQLGGKKLKVQ 417
MNG Q+G K+LKVQ
Sbjct: 319 QAMNGFQIGMKRLKVQ 334
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ LQ+ ++ GCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ
Sbjct: 6 RALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQI 65
Query: 190 RRAQKAQSQANNL 202
RR Q+ N L
Sbjct: 66 RRMQQMAGHMNLL 78
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|194385422|dbj|BAG65088.1| unnamed protein product [Homo sapiens]
gi|194389686|dbj|BAG61804.1| unnamed protein product [Homo sapiens]
Length = 159
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 88/137 (64%), Gaps = 4/137 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A +A
Sbjct: 16 IKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I+
Sbjct: 76 QNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIE 135
Query: 131 DLQILRGSQQTSKGCAF 147
+ +ILRG S+G F
Sbjct: 136 ECRILRGPDGLSRGLLF 152
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A
Sbjct: 17 KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 77 NALHNIKTLPGMHHPIQMKPADSEK 101
>gi|30690648|ref|NP_850472.1| flowering time control protein-like protein [Arabidopsis thaliana]
gi|50897178|gb|AAT85728.1| At2g47310 [Arabidopsis thaliana]
gi|53793649|gb|AAU93571.1| At2g47310 [Arabidopsis thaliana]
gi|110738579|dbj|BAF01215.1| putative FCA-related protein [Arabidopsis thaliana]
gi|330255732|gb|AEC10826.1| flowering time control protein-like protein [Arabidopsis thaliana]
Length = 512
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 102/181 (56%), Gaps = 9/181 (4%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K TE + +F+++ V E+ + KDK T CF+ +E + A+ A
Sbjct: 111 KLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKYKKVEEGNAAIAA 170
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFSIY 126
+ T PG P++V++A+ E ER+ KL++ L K ++ EV+ +FS Y
Sbjct: 171 LTEQFTFPGEMLPVKVRFAEAERERIGFAPVQLPDNPKLYVRCLNKQTTKMEVNEVFSRY 230
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I+D+ + + +G AF+++ KE ALAA++A+NG + GS PL+V++AD +K
Sbjct: 231 GIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNGLFTIRGSDQPLIVRFADPKKP 290
Query: 187 R 187
R
Sbjct: 291 R 291
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K T+ ++ +F + +++++ + D + RG FV ++ A A+ A
Sbjct: 208 KLYVRCLNKQTTKMEVNEVFSRYGIIEDIYMALDDM-KICRGYAFVQFSCKEMALAAIKA 266
Query: 76 CHNKKTLPGASSPLQVKYADGELERL 101
+ T+ G+ PL V++AD + RL
Sbjct: 267 LNGLFTIRGSDQPLIVRFADPKKPRL 292
>gi|2275209|gb|AAB63831.1| putative FCA-related protein [Arabidopsis thaliana]
Length = 324
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 102/185 (55%), Gaps = 13/185 (7%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K TE + +F+++ V E+ + KDK T CF+ +E + A+ A
Sbjct: 111 KLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKYKKVEEGNAAIAA 170
Query: 76 CHNKKTLPGASSPLQVKYADGELERL-------------EHKLFIGMLPKNVSEAEVSAL 122
+ T PG P++V++A+ E ER+ KL++ L K ++ EV+ +
Sbjct: 171 LTEQFTFPGEMLPVKVRFAEAERERIGKCRCFAPVQLPDNPKLYVRCLNKQTTKMEVNEV 230
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
FS YG I+D+ + + +G AF+++ KE ALAA++A+NG + GS PL+V++AD
Sbjct: 231 FSRYGIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNGLFTIRGSDQPLIVRFAD 290
Query: 183 TEKER 187
+K R
Sbjct: 291 PKKPR 295
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K T+ ++ +F + +++++ + D + RG FV ++ A A+ A
Sbjct: 212 KLYVRCLNKQTTKMEVNEVFSRYGIIEDIYMALDDM-KICRGYAFVQFSCKEMALAAIKA 270
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGML 110
+ T+ G+ PL V++AD + RL + F L
Sbjct: 271 LNGLFTIRGSDQPLIVRFADPKKPRLGEQRFYSFL 305
>gi|269868289|gb|ACZ52449.1| Bruno-3 transcript variant 24 [Drosophila virilis]
Length = 322
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 62/80 (77%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SA
Sbjct: 243 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSA 302
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG Q+G K LKVQ
Sbjct: 303 QAAIQAMNGFQIGMKGLKVQ 322
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 40 LVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE 99
L++ +K + GC FV S+QEA A+ H +T+PGASS L VKYAD E E
Sbjct: 17 LMNRALQLKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKE 76
Query: 100 R 100
R
Sbjct: 77 R 77
>gi|47215209|emb|CAG01416.1| unnamed protein product [Tetraodon nigroviridis]
Length = 431
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 132/287 (45%), Gaps = 39/287 (13%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+K+ + +A AA+
Sbjct: 130 DRKLFVGMLNKQQSEDDVRRLFESFGCIEECTILRGPDGNSKGCAFVKFSSHAEAQAAIS 189
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
A++G M G+S LVVK+ADT+KER RR Q+ Q +F + + +
Sbjct: 190 ALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQMG-----------IFNPMALQFG 238
Query: 222 PPYNGYGYQASGSYGLMQY---RLPPMQNQPGFHGIIPPV-------NQGNAMRGASPDL 271
+A+ RLP QP HG + +Q A R A D+
Sbjct: 239 AYGAYAQARAAAGGADGVRGPGRLP----QP--HGRLRRRSDAAYGHHQRPAGRAAHSDV 292
Query: 272 SSN--MG---PRNYAMPPSGFVGSG----YPA-VPGLQYPM--PYPGGMLGHRPLNNSPG 319
S N G P+ PP+ V + YPA P P+ Y G + G
Sbjct: 293 SVNGFTGMPPPQANGQPPAEAVFTNGIHHYPAQSPTAADPLHQAYTGVQQYAAAYPAAYG 352
Query: 320 SVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAF 366
+S A + P GP G NLFIYH+PQEFGD EL F F
Sbjct: 353 QISQAFPHPPPIIPQQQREGPEGCNLFIYHLPQEFGDGELMQMFLPF 399
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
SE+R KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 128 SEDR-KLFVGMLNKQQSEDDVRRLFESFGCIEECTILRGPDGN-SKGCAFVKFSSHAEAQ 185
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 186 AAISALHGSQTMPGASSSLVVKFADTDKERTIRRM 220
>gi|269868146|gb|ACZ52379.1| Bruno-3 transcript variant 6 [Drosophila pseudoobscura]
Length = 395
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
++ADTEKERQ RR Q+ N L
Sbjct: 131 RYADTEKERQIRRMQQTAGHMNLL 154
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 100
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L V+YAD E ER
Sbjct: 101 KFGTQQEAQSAIANLHGSQTMPGASSSLVVRYADTEKER 139
>gi|145306684|gb|ABP57106.1| CUG-BP and ETR-3-like factor 4 isoform 2 [Gallus gallus]
Length = 371
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 73/113 (64%)
Query: 86 SSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
+ P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG SKGC
Sbjct: 2 ARPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGC 61
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
AF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 62 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 11 DSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSH 69
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 70 AEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 108
>gi|145306682|gb|ABP57105.1| CUG-BP and ETR-3-like factor 4 isoform 1 [Gallus gallus]
Length = 351
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 73/113 (64%)
Query: 86 SSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
+ P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG SKGC
Sbjct: 2 ARPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGC 61
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
AF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 62 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 11 DSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSH 69
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 70 AEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 108
>gi|269868299|gb|ACZ52454.1| Bruno-3 transcript variant 28 [Drosophila virilis]
Length = 308
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 62/80 (77%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GP G NLFIYH+PQEFGD EL F FG V+S+KVF+D+AT SKCFGFVS+++P SA
Sbjct: 229 SGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTSA 288
Query: 398 QNAIAMMNGCQLGGKKLKVQ 417
Q AI MNG ++G K LKVQ
Sbjct: 289 QAAIQAMNGFRIGMKGLKVQ 308
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 47 IKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+K + GC FV S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 10 LKPAENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 63
>gi|301108515|ref|XP_002903339.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262097711|gb|EEY55763.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 255
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
Query: 298 LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQ 357
+QYP PY GG P + G V P ++ G GPPG NLF++HIP + +Q
Sbjct: 100 MQYPPPY-GGSSYMYPFPQAYGYPPQIVGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQ 158
Query: 358 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 417
+L N F FG V+SA++ V+K TG S+ FGFVSY++ SA+ AI MNG Q+G K+LKVQ
Sbjct: 159 DLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQ 218
Query: 418 LKRDNKQNK 426
K++ Q +
Sbjct: 219 HKKEKSQGQ 227
>gi|64213752|gb|AAY41232.1| RLS [synthetic construct]
Length = 175
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 79 KKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D+ I+
Sbjct: 16 RYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIM 75
Query: 136 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 76 KDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 127
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ ++E+ + E KLFV + K T ++ +F + V++V I+KD R SRGC FV
Sbjct: 31 ADGERERHGAIEH-KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKD-GMRQSRGCGFV 88
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
SR+ A A++A + G PL +++AD
Sbjct: 89 KFSSREPALAAMSALSGNYVMRGCEQPLIIRFAD 122
>gi|348676035|gb|EGZ15853.1| hypothetical protein PHYSODRAFT_346711 [Phytophthora sojae]
Length = 264
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 83/136 (61%), Gaps = 3/136 (2%)
Query: 291 GYPAVPG--LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIY 348
GYP G +QYP PY GG P + G V P ++ G GPPG NLF++
Sbjct: 98 GYPQPYGQPMQYPPPY-GGSGYMYPFPQAYGYPPQIVGPGPPIQTTESGQGPPGCNLFVF 156
Query: 349 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 408
HIP + +Q+L N F FG V+SA++ V+K TG S+ FGFVSY++ SA+ AI MNG Q
Sbjct: 157 HIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQ 216
Query: 409 LGGKKLKVQLKRDNKQ 424
+G K+LKVQ K++ Q
Sbjct: 217 VGRKRLKVQHKKEKNQ 232
>gi|387220073|gb|AFJ69745.1| rna binding protein napor, partial [Nannochloropsis gaditana
CCMP526]
Length = 139
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 61/82 (74%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+P + D +L AF FG V+SAKV+VDK +G SK FGFVSY+SP +A
Sbjct: 19 GPAGANLFIYHLPHDLTDADLATAFNPFGTVVSAKVYVDKNSGESKGFGFVSYDSPLAAD 78
Query: 399 NAIAMMNGCQLGGKKLKVQLKR 420
AI MNG Q+G K+LKVQ KR
Sbjct: 79 AAIKAMNGFQIGTKRLKVQHKR 100
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 105 LFIGMLPKNVSEAEVSALFSIYGTIKDLQI-LRGSQQTSKGCAFLKYETKEQALAALEAI 163
LFI LP ++++A+++ F+ +GT+ ++ + + SKG F+ Y++ A AA++A+
Sbjct: 25 LFIYHLPHDLTDADLATAFNPFGTVVSAKVYVDKNSGESKGFGFVSYDSPLAADAAIKAM 84
Query: 164 NG 165
NG
Sbjct: 85 NG 86
>gi|349802789|gb|AEQ16867.1| putative cugbp elav family member 1-b [Pipa carvalhoi]
Length = 339
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GAN FIYH+PQEFGDQ+L F FG ++ AKVF+DK +SKCF FVSY++P SAQ
Sbjct: 259 GPEGANFFIYHLPQEFGDQDLLQMFMPFGNIVPAKVFIDKQN-LSKCF-FVSYDNPVSAQ 316
Query: 399 NAIAMMNGCQLGGKKLKVQLKRD 421
AI MNG Q+G K+LKVQLKR
Sbjct: 317 AAIQSMNGFQIGMKRLKVQLKRS 339
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
+FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+A
Sbjct: 1 MFSQFGQIEECRILRGPDGLSRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFA 60
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY 224
DT+K+++ +R + Q NA S +L G + AP Y
Sbjct: 61 DTQKDKEQKRMTQQLQQQMQQINAASMWGNLAGLSSL--APQY 101
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 34 MFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93
MF +F ++E I++ SRGC F+ +R A A+ A H +T+ G SSP+ VK+
Sbjct: 1 MFSQFGQIEECRILRGPDGL-SRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKF 59
Query: 94 ADGELERLEHKL 105
AD + ++ + ++
Sbjct: 60 ADTQKDKEQKRM 71
>gi|148699458|gb|EDL31405.1| mCG145499 [Mus musculus]
Length = 376
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 76/121 (62%)
Query: 82 LPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT 141
LP + P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +
Sbjct: 56 LPKMARPIQVKPADSESRGGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGS 115
Query: 142 SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANN 201
SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 116 SKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGI 175
Query: 202 L 202
L
Sbjct: 176 L 176
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 78 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 136
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 137 LHGSQTMPGASSSLVVKFADTDKERTLRRM 166
>gi|301108523|ref|XP_002903343.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262097715|gb|EEY55767.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 260
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
Query: 298 LQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQ 357
+QYP PY GG P + G V P ++ G GPPG NLF++HIP + +Q
Sbjct: 105 MQYPPPY-GGSGYMYPFPQAYGYPPQIVGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQ 163
Query: 358 ELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQ 417
+L N F FG V+SA++ V+K TG S+ FGFVSY++ SA+ AI MNG Q+G K+LKVQ
Sbjct: 164 DLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQ 223
Query: 418 LKRDNKQ 424
K++ Q
Sbjct: 224 HKKEKSQ 230
>gi|302830592|ref|XP_002946862.1| hypothetical protein VOLCADRAFT_72841 [Volvox carteri f.
nagariensis]
gi|300267906|gb|EFJ52088.1| hypothetical protein VOLCADRAFT_72841 [Volvox carteri f.
nagariensis]
Length = 450
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 102/177 (57%), Gaps = 12/177 (6%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
K+FVGQVP +T+ Q+ A+F ++ + + +I + R S+GC V EA+ A+
Sbjct: 16 KVFVGQVPHEVTQDQVFALFSKYGTIKKCALITGQDGR-SKGCAMVTYDRWAEAELAIEH 74
Query: 76 CHNKKTLPGASSPLQVKYADGELERLE--------HKLFIGMLPKNVSEAEVSALFSIYG 127
+ L G + L VK+AD R + KLF+G +P++ +E + LF+ YG
Sbjct: 75 ENGTANLGGGRT-LLVKFADPPRGRGDGPVMGVAPKKLFVGQIPQHTTEQHIRTLFAAYG 133
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
TI D+ +L ++ + GCAF+ +E QA A+ ++NG+ +EG++ P+VVK+AD +
Sbjct: 134 TITDVHVL--NKGNAPGCAFVTFERWSQAENAMLSLNGQTLIEGATTPMVVKFADAK 188
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E K+F+G +P V++ +V ALFS YGTIK ++ G SKGCA + Y+ +A A+E
Sbjct: 14 EPKVFVGQVPHEVTQDQVFALFSKYGTIKKCALITGQDGRSKGCAMVTYDRWAEAELAIE 73
Query: 162 AINGKHKMEGSSVPLVVKWADTEKER 187
NG + G L+VK+AD + R
Sbjct: 74 HENGTANLGGGRT-LLVKFADPPRGR 98
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLFIG +P +EA++ +FS G I +L ILR Q SKGCAFL YE + A A+ +
Sbjct: 361 KLFIGQVPFEANEADLWPIFSPLGNILELVILR-HQGKSKGCAFLTYENRTDAEKAIRTL 419
Query: 164 NGKHKMEGSSVP----LVVKWADT 183
+ + + +S P L VK+A+T
Sbjct: 420 DSQVSV--TSDPRGRLLTVKYANT 441
>gi|330794954|ref|XP_003285541.1| hypothetical protein DICPUDRAFT_97075 [Dictyostelium purpureum]
gi|325084544|gb|EGC37970.1| hypothetical protein DICPUDRAFT_97075 [Dictyostelium purpureum]
Length = 190
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
GP G+NLF+Y+IP F DQEL FQ +G V+SAKV++DK TGVSK FGF+SY++P SA
Sbjct: 100 VGPNGSNLFVYNIPNYFTDQELSTLFQQYGNVVSAKVYLDKNTGVSKGFGFISYDNPTSA 159
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
AI+ +NG + GKKLKV LK+ ++PY
Sbjct: 160 SLAISNLNGSMMVGKKLKVSLKQAGHGSQPY 190
>gi|307106109|gb|EFN54356.1| hypothetical protein CHLNCDRAFT_135626 [Chlorella variabilis]
Length = 466
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 32/284 (11%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
+LFVGQ+P TE L+ +F + +++V++++ + SRGCC V +A++A+
Sbjct: 15 RLFVGQIPTSCTEEDLVPVFAGYGEIEKVSLVRGPDNK-SRGCCMVQFKRWADAERAMLD 73
Query: 76 CHNKKTL-PGASSPLQVKYAD---------GELERLEHKLFIGMLPKNVSEAEVSALFSI 125
+ L G PL +A+ E KLF+G +PK EA++ A+F
Sbjct: 74 VNGTSPLESGKGRPLVCHFANPRRTMGSQMSETAIAPRKLFVGQIPKTSVEADILAVFGP 133
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G ++ + IL+ S+ GCAF++Y + AA+EA++ K M G+ PLVVK+AD +K
Sbjct: 134 FGEVEQINILK-SKGVHAGCAFVQYSSWAACEAAIEALHDKTTMPGAEHPLVVKFADAKK 192
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
A QK + HP+L GA ++ + Y G G+ +P M
Sbjct: 193 S-DAGMMQK-RGLGMMGMGGFGAHPALLGA--------HHHHPYGDMGLPGMTHMAMPGM 242
Query: 246 QNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G++ Q N + A+ + MG PSG G
Sbjct: 243 GGLGAMSGLL----QANGLSHAALGMGMGMG------LPSGLAG 276
>gi|269868277|gb|ACZ52443.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 372
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 7 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 66
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 67 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 122
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 12 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 70
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 71 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 107
>gi|269868275|gb|ACZ52442.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 372
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 7 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 66
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 67 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 122
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 12 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 70
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 71 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 107
>gi|269868273|gb|ACZ52441.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 373
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|391341498|ref|XP_003745067.1| PREDICTED: uncharacterized protein LOC100900989 [Metaseiulus
occidentalis]
Length = 462
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 62/87 (71%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G+NLFIYH+PQ+ D +L + F FG V+SAKVFVD+ T +SKCFGFVSY + AQ
Sbjct: 354 GPEGSNLFIYHLPQDLTDMDLVSLFAPFGEVISAKVFVDRHTQLSKCFGFVSYSNGLHAQ 413
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQN 425
AI ++G +G K+LKVQLKR N
Sbjct: 414 AAIRALHGFAIGDKRLKVQLKRSKMAN 440
>gi|237836675|ref|XP_002367635.1| RNA recognition motif domain containing protein [Toxoplasma gondii
ME49]
gi|211965299|gb|EEB00495.1| RNA recognition motif domain containing protein [Toxoplasma gondii
ME49]
gi|221483936|gb|EEE22240.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221505218|gb|EEE30872.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 230
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 30/187 (16%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG++P +TE L +F +F + +V +I+D+ T A +GC FV S +AD+A+
Sbjct: 39 VKLFVGRLPLTVTEDILCTLFNQFGPIADVVLIRDRHTNAFKGCAFVTMQSITDADRAIR 98
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAEV 119
+ L A LQVKYA GE ERL + KLF+G LP ++ E +
Sbjct: 99 HLDSAYVLDPALGGLQVKYAVGEAERLGLPGTSGSGAAAGVDQVKLFVGSLPPDIKEDAL 158
Query: 120 SALFSIYGTIKDLQIL---------------RGSQQTSKGCAFLKYETKEQALAALEAIN 164
LF +G ++++ ++ R +++ GCAF+++ KE+A A+ +N
Sbjct: 159 RDLFERFGRVEEVFLMKDEPGNGANLSGGAPRPGKKSRTGCAFVRFAYKEEAFFAISELN 218
Query: 165 GKHKMEG 171
GK M G
Sbjct: 219 GKVIMPG 225
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEA 162
KLF+G LP V+E + LF+ +G I D+ ++R + KGCAF+ ++ A A+
Sbjct: 40 KLFVGRLPLTVTEDILCTLFNQFGPIADVVLIRDRHTNAFKGCAFVTMQSITDADRAIRH 99
Query: 163 INGKHKMEGSSVPLVVKWADTEKER 187
++ + ++ + L VK+A E ER
Sbjct: 100 LDSAYVLDPALGGLQVKYAVGEAER 124
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDK--------------TTRASRGC 58
++VKLFVG +P + E L +F+ F V+EV ++KD+ ++ GC
Sbjct: 140 DQVKLFVGSLPPDIKEDALRDLFERFGRVEEVFLMKDEPGNGANLSGGAPRPGKKSRTGC 199
Query: 59 CFVICPSRQEADKAVNACHNKKTLPG 84
FV ++EA A++ + K +PG
Sbjct: 200 AFVRFAYKEEAFFAISELNGKVIMPG 225
>gi|151936113|gb|ABS18833.1| ELAV-type RNA binding protein variant B [Caenorhabditis elegans]
Length = 193
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D +
Sbjct: 115 ALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 135 LRGSQQTSKG 144
LR S+G
Sbjct: 174 LRDQDGKSRG 183
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 327 NSNPSTSSSGGTGP-------PGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKA 379
++ PST++ P +F+ IP+++ + + F+ +G V S + DK+
Sbjct: 32 DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKS 91
Query: 380 TGVSKCFGFVSYESPASAQNAI-AMMNGCQLGGKKLKVQLKRDNKQNK 426
T SK FV++ A A A+ N + G VQ+K + +N+
Sbjct: 92 TQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENR 139
>gi|449491676|ref|XP_002192940.2| PREDICTED: LOW QUALITY PROTEIN: bruno-like 5, RNA binding protein
[Taeniopygia guttata]
Length = 370
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 71/111 (63%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG SKGCAF
Sbjct: 4 PIQVKPADSESRGGDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 64 VKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQ 114
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ S+GC FV S EA A++A
Sbjct: 20 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 78
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 79 LHGSQTMPGASSSLVVKFADTDKERTLRRM 108
>gi|397632370|gb|EJK70525.1| hypothetical protein THAOC_08111, partial [Thalassiosira oceanica]
Length = 548
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 61/82 (74%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFIYH+P + D +L AF FG V+SAKV+VD+ TG SK FGFVSY+S SA+
Sbjct: 367 GPAGANLFIYHLPIDLTDADLATAFNPFGNVISAKVYVDRYTGESKGFGFVSYDSVMSAE 426
Query: 399 NAIAMMNGCQLGGKKLKVQLKR 420
AI MNG Q+G K+LKVQ KR
Sbjct: 427 LAIEQMNGFQIGNKRLKVQHKR 448
>gi|388506964|gb|AFK41548.1| unknown [Medicago truncatula]
Length = 498
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 103/190 (54%), Gaps = 22/190 (11%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VK++V VP+ +EA + +F+ + + EV +++DK T +G C V + AD +
Sbjct: 74 VKVYVAPVPRTASEADVRLVFQGYGTIVEVVLLRDKATGVRQGSCLVKYSTFDVADMTIK 133
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---------LEH--------KLFIGMLPKNVSEA 117
A N+ T PG SSP+ V++ D + ER +E K+++G + S+
Sbjct: 134 ALSNQYTFPGESSPVVVRFTDRKRERFGLRDFCQNMERRDPPEVVGKVYVGCINNEASKQ 193
Query: 118 EVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177
E+ +FS YG I+D+ +LR ++ F+K+ +E ALAA++ ++ M G PL+
Sbjct: 194 EIEEIFSPYGHIEDVVVLR-----NRRYGFVKFYNREMALAAIKGLDRTFTMRGCDQPLI 248
Query: 178 VKWADTEKER 187
V++A+ +K R
Sbjct: 249 VRFAEPKKPR 258
>gi|325191692|emb|CCA25727.1| CUGBP and ETR3like factor putative [Albugo laibachii Nc14]
Length = 260
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 68/97 (70%)
Query: 330 PSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFV 389
P ++ G GPPG NLF++HIP + +Q+L N F +G V+SA++ V+K TG S+ FGFV
Sbjct: 139 PIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATYGNVISARIMVEKETGRSRGFGFV 198
Query: 390 SYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
SY++P SA AI MNG Q+G K+LKVQ K++ N+
Sbjct: 199 SYDNPPSADAAIKGMNGFQVGRKRLKVQHKKERDPNQ 235
>gi|452823093|gb|EME30106.1| RNA-binding protein [Galdieria sulphuraria]
Length = 477
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M +S + + K+F+GQ+P ++ E L + + + V E I++++ T SRGC F
Sbjct: 26 MTQSPSTRLFKDSPCKIFIGQLPSNVVEEDLRRICEPYGTVLETTIVRNRMTNQSRGCGF 85
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
+ +R+EAD A+ A H K P S PLQV+ A+ + E KL+IG L V E ++
Sbjct: 86 CVFHNREEADNAIQALHGTKPFPSGSKPLQVRLAEKNSDFSETKLYIGHLEPIVEEQQLR 145
Query: 121 ALFSIYGTIKDLQILR-----GSQQTSKGCAFLKYETKEQAL-AALEAINGKHKMEGSSV 174
F+ +G I D+ I+R + F+++ E A A L A NG+ +E
Sbjct: 146 NAFTKFGEIVDVNIVRPRNVDNQHNSPYNYGFVEFSGNEAADNAILSAKNGQVWLENGKP 205
Query: 175 PLVVKWADTEKERQARRAQ 193
V++A + R R +
Sbjct: 206 LTEVRYARLSRNRYGRNSD 224
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP NLF+Y IP ++ D L N F FG++LS+ VF+DK T SK FGFVSY P SA
Sbjct: 387 GPSECNLFVYGIPPDWDDAMLANLFLPFGKLLSSNVFIDKRTQRSKGFGFVSYAYPDSAH 446
Query: 399 NAIAMMNGCQL-GGKKLKVQLKRDNKQN 425
AIAM+NG L G+ LKV LK++ N
Sbjct: 447 MAIAMLNGMTLPNGRTLKVSLKKEKNDN 474
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 345 LFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMM 404
+FI +P +++L + +G VL + ++ T S+ GF + + A NAI +
Sbjct: 42 IFIGQLPSNVVEEDLRRICEPYGTVLETTIVRNRMTNQSRGCGFCVFHNREEADNAIQAL 101
Query: 405 NGCQ---LGGKKLKVQLKRDN 422
+G + G K L+V+L N
Sbjct: 102 HGTKPFPSGSKPLQVRLAEKN 122
>gi|338727851|ref|XP_001916440.2| PREDICTED: CUGBP Elav-like family member 4-like [Equus caballus]
Length = 412
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 34/183 (18%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R K
Sbjct: 51 HDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCLFLTVCERSLC-K 109
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A + H ++ LP + P+QVK AD E S S L
Sbjct: 110 ANSVLHWQEVLPSMNRPIQVKPADSE-----------------SRGGSSCL--------- 143
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+Q CAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 144 -------RQPPSRCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRR 196
Query: 192 AQK 194
Q+
Sbjct: 197 MQQ 199
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 38/49 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFG 387
GP G NLFIYH+PQEFGD EL F FG V+S+KVFVD+AT SKCFG
Sbjct: 363 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFG 411
>gi|302832507|ref|XP_002947818.1| hypothetical protein VOLCADRAFT_88093 [Volvox carteri f.
nagariensis]
gi|300267166|gb|EFJ51351.1| hypothetical protein VOLCADRAFT_88093 [Volvox carteri f.
nagariensis]
Length = 1966
Score = 104 bits (259), Expect = 9e-20, Method: Composition-based stats.
Identities = 57/203 (28%), Positives = 111/203 (54%), Gaps = 16/203 (7%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
+LFVG VP+ EA L F++ +V ++ +++D+T+ SRGC FV + +EA+ A+
Sbjct: 31 RLFVGSVPRTAVEATLREYFEQCGVVRDLAVLRDRTSGKSRGCAFVSYLTLEEAEAAIQK 90
Query: 76 CHNKKTLPGASSPLQVKYAD-------GELERLEHKLFIGMLPKNV--------SEAEVS 120
+ LPG+ +PL+V++A GE ++F +P + E E+
Sbjct: 91 FDRQLMLPGSQTPLEVRFAKNHSYVQAGEGPSGNRQIFFSRVPLTLKVCHHVAYEEDEIL 150
Query: 121 ALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
+LF YG ++ + + + + SKGC F++ T+E A+AA+E ++ +H + + + V+
Sbjct: 151 SLFLAYGEVETINVFKCRRSGRSKGCGFIEMRTREAAIAAMENLDERHVFDSTGTAISVR 210
Query: 180 WADTEKERQARRAQKAQSQANNL 202
WAD + +++ ++A + N +
Sbjct: 211 WADPDLQQRKKKAMDDANAENRM 233
Score = 92.4 bits (228), Expect = 4e-16, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 28 EAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87
E ++L++F + V+ +N+ K + + S+GC F+ +R+ A A+ + +
Sbjct: 146 EDEILSLFLAYGEVETINVFKCRRSGRSKGCGFIEMRTREAAIAAMENLDERHVFDSTGT 205
Query: 88 PLQVKYADGELERLEHK-----------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+ V++AD +L++ + K LF + ++ +E +V LFS +G + D+ + R
Sbjct: 206 AISVRWADPDLQQRKKKAMDDANAENRMLFFAKVLRSTTEDDVRRLFSRFGKVYDINLFR 265
Query: 137 GSQ--QTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
Q T+KGC + A+AA+ A++G H EG P+VVKW DT +R+ R
Sbjct: 266 AFQGAPTTKGCGLVTMSQHSDAVAAIAALDGIHVWEGMDCPMVVKWMDTALQRRRREQHL 325
Query: 195 AQSQANNLPNA 205
A + LP++
Sbjct: 326 ANIRQTPLPSS 336
Score = 61.2 bits (147), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALE 161
H+LF+G +P+ EA + F G ++DL +LR + S+GCAF+ Y T E+A AA++
Sbjct: 30 HRLFVGSVPRTAVEATLREYFEQCGVVRDLAVLRDRTSGKSRGCAFVSYLTLEEAEAAIQ 89
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+ + + GS PL V++A QA Q
Sbjct: 90 KFDRQLMLPGSQTPLEVRFAKNHSYVQAGEGPSGNRQ 126
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G +P+ TE LLA+F+ V E+ I+ DK TR +G FV +R++A++A+
Sbjct: 521 VKLFIGNIPRGCTEKHLLALFQSIGKVVELVIMYDKVTREPKGSAFVWYATREDAERAIL 580
Query: 75 ACHNKKTLPGASS----PLQVKYADGELERL 101
+ + P S PL V+ A R+
Sbjct: 581 QFNLRPVFPDPSGAQDRPLVVRKAKARSSRM 611
Score = 42.7 bits (99), Expect = 0.32, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
KLFIG +P+ +E + ALF G + +L I+ + KG AF+ Y T+E A A+
Sbjct: 522 KLFIGNIPRGCTEKHLLALFQSIGKVVELVIMYDKVTREPKGSAFVWYATREDAERAILQ 581
Query: 163 INGKHKMEGSS----VPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
N + S PLVV+ A R A + A L A + GA+P
Sbjct: 582 FNLRPVFPDPSGAQDRPLVVRKAKARSSRMVVSAASMYAAATTLGQA-----APLGAMP 635
Score = 38.9 bits (89), Expect = 4.8, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 323 PAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGV 382
PA ++ P+ S SG PP LF+ +P+ + L F+ G V V D+ +G
Sbjct: 11 PAELSTQPAGSESGDP-PPLHRLFVGSVPRTAVEATLREYFEQCGVVRDLAVLRDRTSGK 69
Query: 383 SKCFGFVSYESPASAQNAI 401
S+ FVSY + A+ AI
Sbjct: 70 SRGCAFVSYLTLEEAEAAI 88
>gi|384247531|gb|EIE21017.1| RNA-binding domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 344
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 103/197 (52%), Gaps = 14/197 (7%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M E +SE R LFVGQVP + E L +F F V ++++K + RGC
Sbjct: 1 MLPRMGEPVASEPR--LFVGQVPSDVREEDLWPLFTPFGTVRNLHMLKGSDGK-PRGCAM 57
Query: 61 VICPSRQEADKAVNACHNKKTLP--GASSPLQVKYAD---------GELERLEHKLFIGM 109
V+ +A+ A A + L G PL V +A+ E KLF+G
Sbjct: 58 VLFQRWAQAEAAAEALDGQLVLETGGQRKPLVVHFANPRRAPPGQPAEPGIAPRKLFVGQ 117
Query: 110 LPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 169
+P++V+E + LF YG I+ + ILR + S GCAF++++ QA A+EA NGK ++
Sbjct: 118 VPRDVTEDTLRPLFEPYGDIEHINILRTHRGQSAGCAFVQFQKWAQAEVAMEAHNGKTRL 177
Query: 170 EGSSVPLVVKWADTEKE 186
S VPLVVK+AD +++
Sbjct: 178 GNSEVPLVVKFADAKRK 194
>gi|26350575|dbj|BAC38924.1| unnamed protein product [Mus musculus]
Length = 148
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 84/147 (57%), Gaps = 12/147 (8%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 4 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 63
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT--- 120
Query: 207 SQHPSLFGALPMGYAPPYNGYGYQASG 233
PSL LP PY+ Y SG
Sbjct: 121 ---PSL--TLPFS---PYSAYAQAVSG 139
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S
Sbjct: 13 ESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSH 70
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 71 TEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 109
>gi|294877844|ref|XP_002768155.1| ribonucleoprotein, putative [Perkinsus marinus ATCC 50983]
gi|239870352|gb|EER00873.1| ribonucleoprotein, putative [Perkinsus marinus ATCC 50983]
Length = 391
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 10/189 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTT-RASRGCCFVICPSRQEADKAV 73
V+LFVG++P E + +F+ + V EV +I+ K + GC FV + EA A+
Sbjct: 9 VRLFVGKLPAAWNEQNIRDLFEAYGEVQEVGLIRPKENGKQQTGCAFVKFGAVHEAATAI 68
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFS 124
+ + A +QV++A+GE ERL KLF+G +P + S+ E+ +F
Sbjct: 69 KSLNGTYKADDAPGFVQVQFANGEPERLGLPEDTEGYSQKLFVGNVPPSTSDDELKQIFD 128
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + + L + + AF+++ K AL A++A+N K+ G P+ VK ADT
Sbjct: 129 EYGNVTEAYSLESKRASGNKAAFVRFSKKSDALKAIDALNDKYTFPGEPHPITVKCADTR 188
Query: 185 KERQARRAQ 193
++R A + +
Sbjct: 189 EQRLAHKQE 197
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQ 155
R+ +LF+G LP +E + LF YG ++++ ++R G QQT GCAF+K+ +
Sbjct: 6 RIPVRLFVGKLPAAWNEQNIRDLFEAYGEVQEVGLIRPKENGKQQT--GCAFVKFGAVHE 63
Query: 156 ALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
A A++++NG +K + + + V++A+ E ER
Sbjct: 64 AATAIKSLNGTYKADDAPGFVQVQFANGEPER 95
>gi|449470886|ref|XP_002191720.2| PREDICTED: CUGBP Elav-like family member 4-like [Taeniopygia
guttata]
Length = 365
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 71/111 (63%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG SKGCAF
Sbjct: 4 PIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+KY + +A AA+ +++G M G+S LVVK+ADT+KER RR + Q
Sbjct: 64 VKYGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTLRRMHQMAGQ 114
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K +E + +F+ F ++E I++ AS+GC FV S EA A
Sbjct: 17 EDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDG-ASKGCAFVKYGSHAEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+N+ H +T+PGASS L VK+AD + ER ++
Sbjct: 76 INSLHGSQTMPGASSSLVVKFADTDKERTLRRM 108
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 387 GFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
GFVS+++P SAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 324 GFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 365
>gi|281350688|gb|EFB26272.1| hypothetical protein PANDA_008623 [Ailuropoda melanoleuca]
Length = 245
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 10/121 (8%)
Query: 88 PLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG
Sbjct: 4 PIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRG 63
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KER RR Q+
Sbjct: 64 PDGNSKGCAFVKYSSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAG 123
Query: 198 Q 198
Q
Sbjct: 124 Q 124
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S++R KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 26 SQDR-KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQ 83
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+N+ H +T+PGASS L VK+AD + ER ++
Sbjct: 84 AAINSLHGSQTMPGASSSLVVKFADTDKERTMRRM 118
>gi|118379755|ref|XP_001023043.1| hypothetical protein TTHERM_00348880 [Tetrahymena thermophila]
gi|89304810|gb|EAS02798.1| hypothetical protein TTHERM_00348880 [Tetrahymena thermophila
SB210]
Length = 474
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 9/194 (4%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+GQVPK E+ L F++ + ++ +I+D+ R +GC F S EA+K +
Sbjct: 95 IKLFIGQVPKDWQESDLKIFFEKHTSITQIEVIRDQKFR-HQGCAFATFSSMSEAEKVIE 153
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSALFSIYGT 128
NK P + + +K+A GE ERL HKL I LP +S+A +S +F +G
Sbjct: 154 FYKNKH-FPNSKQEIIMKWASGEEERLGVSENSSHKLIIKNLPALISDASISNIFDNFGR 212
Query: 129 IKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
I+ L+++R + + KG AF+KY KE A A++ +N ++ + L V + + ++
Sbjct: 213 IQQLKVIRDKKTSECKGHAFIKYYEKESAHLAVQNLNKQNIYLIQNKKLKVSFIEKSYQK 272
Query: 188 QARRAQKAQSQANN 201
+ ++ K Q N
Sbjct: 273 KQKQILKYMKQNTN 286
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP +N+F++H+P+++ ++ L F +G ++S + K G S+ +GFVS+ P A
Sbjct: 378 GPSHSNIFVFHLPKQYNEKNLFELFSGYGNIISITI-CRKQNGESRGYGFVSFNQPYEAA 436
Query: 399 NAIAMMNGCQLGGKKLKVQLKR 420
+AI +NG L GK++KV+LK+
Sbjct: 437 HAIKELNGLNLMGKRIKVELKQ 458
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 336 GGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPA 395
G + L I ++P D + N F FGR+ KV DK T K F+ Y
Sbjct: 180 GVSENSSHKLIIKNLPALISDASISNIFDNFGRIQQLKVIRDKKTSECKGHAFIKYYEKE 239
Query: 396 SAQNAIAMMNGCQ---LGGKKLKVQLKRDNKQNK 426
SA A+ +N + KKLKV + Q K
Sbjct: 240 SAHLAVQNLNKQNIYLIQNKKLKVSFIEKSYQKK 273
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 105 LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAIN 164
+F+ LPK +E + LFS YG I + I R S+G F+ + +A A++ +N
Sbjct: 384 IFVFHLPKQYNEKNLFELFSGYGNIISITICRKQNGESRGYGFVSFNQPYEAAHAIKELN 443
Query: 165 GKHKMEGSSVPLVVKWADTEK 185
G + M G + + +K EK
Sbjct: 444 GLNLM-GKRIKVELKQTHIEK 463
>gi|118402075|ref|XP_001033357.1| hypothetical protein TTHERM_00421020 [Tetrahymena thermophila]
gi|89287705|gb|EAR85694.1| hypothetical protein TTHERM_00421020 [Tetrahymena thermophila
SB210]
Length = 756
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 14/169 (8%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K+M E L F+++ + +V +I+DK + +GC FV+ S A+ A+ A K LP
Sbjct: 75 KNMEENDLKTFFEKYGEIVKVQVIRDKNNQ-HKGCAFVVFASILCANIAIEALKATK-LP 132
Query: 84 GASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
G VK+AD E +RL ++ L++ +PKN SE E+ +F YG +K++ I +
Sbjct: 133 G------VKWADNEPDRLGIRQDQDYVLYVAHIPKNASEPEIRNVFENYGIVKEVDIPKD 186
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
TS+G F+K+E EQA+ A +A++ K + + LVVK+ D +K+
Sbjct: 187 QSGTSRGFVFVKFENIEQAILAKQALHEKQVLNNQTQSLVVKFYDPKKK 235
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 334 SSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYES 393
S TGPPGANLFI+H+P ++ D +L F+ FG +LSA+V + + G SK +GFVSY S
Sbjct: 652 SQKTTGPPGANLFIFHLPNDYRDSDLLRLFKKFGDLLSARV-ITRPDGSSKGYGFVSYTS 710
Query: 394 PASAQNAIAMMNGCQ 408
P AQ AI MNG Q
Sbjct: 711 PDGAQQAIQQMNGLQ 725
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L+V +PK+ +E ++ +F+ + +V EV+I KD++ SRG FV + ++A A A
Sbjct: 154 LYVAHIPKNASEPEIRNVFENYGIVKEVDIPKDQSG-TSRGFVFVKFENIEQAILAKQAL 212
Query: 77 HNKKTLPGASSPLQVKYAD 95
H K+ L + L VK+ D
Sbjct: 213 HEKQVLNNQTQSLVVKFYD 231
>gi|426386616|ref|XP_004059779.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Gorilla
gorilla gorilla]
gi|194376596|dbj|BAG57444.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 4 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 63
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL---- 119
Query: 207 SQHPSLFGALPMGYAPPYNGY 227
PSL LP PY+ Y
Sbjct: 120 --TPSL--TLPFS---PYSAY 133
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 10 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 67
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 68 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 109
>gi|47215644|emb|CAG01361.1| unnamed protein product [Tetraodon nigroviridis]
Length = 267
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 15/139 (10%)
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEV 119
D + AC+ + T P+QVK AD E + + KLF+GML K +E +V
Sbjct: 102 DGEMRACNGRMT-----RPIQVKPADSESRGAVSLSANCPKEDRKLFVGMLNKQQTEEDV 156
Query: 120 SALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
LF YG I++ +LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK
Sbjct: 157 YRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVK 216
Query: 180 WADTEKERQARRAQKAQSQ 198
+ADT+KER RR Q+ Q
Sbjct: 217 FADTDKERTIRRMQQMVGQ 235
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+E KLFVG + K TE + +F+ + +++E +++ S+GC FV + EA
Sbjct: 137 KEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGN-SKGCAFVKFSTHTEAQS 195
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 196 AISALHGSQTMPGASSSLVVKFADTDKERTIRRM 229
>gi|149034410|gb|EDL89147.1| similar to bruno-like 5, RNA binding protein (predicted) [Rattus
norvegicus]
Length = 319
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 4 PIQVKPADSENRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 63
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL 119
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 10 ADSENRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 67
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 68 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 109
>gi|297275215|ref|XP_001106276.2| PREDICTED: CUGBP Elav-like family member 4-like [Macaca mulatta]
Length = 438
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 82 LPGAS-SPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
LPG S S + L++ + KLF+GML K SE +V LF +G I++ ILRG
Sbjct: 103 LPGGSGSEAGFLWYLAALQKEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDG 162
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 163 NSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 220
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+E KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 122 KEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQA 180
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 181 AINALHGSQTMPGASSSLVVKFADTDKERTMRRM 214
>gi|50725240|dbj|BAD34210.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
Length = 546
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 88 PLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG 144
P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D+ I++ + S+G
Sbjct: 3 PIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRG 62
Query: 145 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
C F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 63 CGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 105
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ ++E+ + E KLFV + K T ++ +F + V++V I+KD R SRGC FV
Sbjct: 9 ADGERERHGAIEH-KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGM-RQSRGCGFV 66
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
SR+ A A++A + G PL +++AD + R
Sbjct: 67 KFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 105
>gi|300123103|emb|CBK24110.2| unnamed protein product [Blastocystis hominis]
Length = 372
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 59/82 (71%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLF+YH+P E D +L F +G +LSAKV+VDK TG SK FGFVS+ S +AQ
Sbjct: 280 GPEGANLFVYHLPHEMADSDLTTLFVPYGTILSAKVYVDKQTGESKGFGFVSFNSFEAAQ 339
Query: 399 NAIAMMNGCQLGGKKLKVQLKR 420
AI MNG Q+ K+LKVQ+K+
Sbjct: 340 EAIRHMNGFQIDSKRLKVQVKK 361
>gi|328722643|ref|XP_001943968.2| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Acyrthosiphon pisum]
Length = 389
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLFIGML K +SE ++ +F +G I++ +LR SKGCAF+ Y TK+ A+AA++
Sbjct: 7 ERKLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPNGVSKGCAFVTYTTKQNAIAAIK 66
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
++ MEG + PLVVK+ADT+KE+ +R Q+ Q+
Sbjct: 67 GMHHSQTMEGCTCPLVVKFADTQKEKDQKRMQQMQA 102
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+S ER KLF+G + K ++E + MF+ F ++E ++++D S+GC FV ++Q A
Sbjct: 4 ASPER-KLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPNG-VSKGCAFVTYTTKQNA 61
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ H+ +T+ G + PL VK+AD + E+ + ++
Sbjct: 62 IAAIKGMHHSQTMEGCTCPLVVKFADTQKEKDQKRM 97
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 388 FVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FVSY++ SAQ AI MN Q+G K+LKVQLKR + ++PY
Sbjct: 349 FVSYDNAYSAQAAIQTMNSYQVGNKRLKVQLKRPKEASRPY 389
>gi|296222551|ref|XP_002757237.1| PREDICTED: CUGBP Elav-like family member 4-like [Callithrix
jacchus]
Length = 479
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 77 HNKKTLPGASSPLQVKYADGELERL-----EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
H + + GA +P + R+ + KLF+GML K SE +V LF +G I++
Sbjct: 115 HALQVMGGAGTPAPRHHGTTSSLRIGPVPKDRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 174
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 175 CTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRR 234
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 235 MQQMAGQ 241
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA A+NA
Sbjct: 147 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQAAINA 205
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 206 LHGSQTMPGASSSLVVKFADTDKERTMRRM 235
>gi|341875924|gb|EGT31859.1| hypothetical protein CAEBREN_30063 [Caenorhabditis brenneri]
Length = 382
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 68/101 (67%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLFIGML K SE +V LF+ +G + ++ +LRG+ SKGCAF+KY++ A A+
Sbjct: 25 DKKLFIGMLSKTQSEDDVRTLFAAFGELDEVTVLRGADGVSKGCAFVKYKSGFDAHMAIS 84
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A++G M G+S LVVK+ADTE+ERQ RR Q+ +Q L
Sbjct: 85 ALHGSQTMPGASSSLVVKYADTERERQNRRMQQMAAQMGML 125
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 37/48 (77%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCF 386
GP G NLFIYH+PQEFGD EL F FG V+SAKVFVD+AT SKCF
Sbjct: 334 GPDGCNLFIYHLPQEFGDAELIQMFAPFGHVVSAKVFVDRATNQSKCF 381
>gi|444523808|gb|ELV13628.1| CUGBP Elav-like family member 4 [Tupaia chinensis]
Length = 325
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+
Sbjct: 18 DRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAIN 77
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 78 ALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+E KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 16 DEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQA 74
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 75 AINALHGSQTMPGASSSLVVKFADTDKERTMRRM 108
>gi|332029758|gb|EGI69627.1| ELAV-like protein 2 [Acromyrmex echinatior]
Length = 359
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 172/413 (41%), Gaps = 86/413 (20%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E + L V +P+ MT+ ++ ++F V+ +I+DK + S G FV ++A+K
Sbjct: 25 ESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEK 84
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A+N + + + ++V YA E ++ L++ LPKN+++ ++ LFS YG I
Sbjct: 85 AINTLNGLRL---QNKTIKVSYARPSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGRII 141
Query: 131 DLQIL-RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+IL SKG F++++ + +A A++ +NG +GSS P+ VK+A
Sbjct: 142 TSRILCDNITGLSKGVGFIRFDQRVEAERAIQELNGTIP-KGSSEPITVKFA-------- 192
Query: 190 RRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
NN N + P L L AP QA+ +G P+ +
Sbjct: 193 ----------NNPSNNNKAIPPLAAYL----AP-------QATRRFG------GPIHHPT 225
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAV-PGLQYPMPYPGGM 308
G IP + P G A+ GLQ P G +
Sbjct: 226 GRFRYIP-------------------------LSPLSSTGKAMLAINKGLQRYSPLAGDL 260
Query: 309 LGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGR 368
L + L P + +G G +F+Y++ E + L F FG
Sbjct: 261 LANSML---------------PGNTMNGA----GWCIFVYNLAPETEENVLWQLFGPFGA 301
Query: 369 VLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRD 421
V S KV D T K FGFV+ + A AI +NG LG + L+V K +
Sbjct: 302 VQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGNRVLQVSFKTN 354
>gi|340709266|ref|XP_003393232.1| PREDICTED: ELAV-like protein 2-like [Bombus terrestris]
Length = 533
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 173/426 (40%), Gaps = 100/426 (23%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E + L V +P+ MT+ ++ ++F V+ +I+DK T S G FV ++A+K
Sbjct: 25 ESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEK 84
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A+N + L + ++V YA E ++ L++ LPKN+++ ++ LF+ YG I
Sbjct: 85 AINTLNG---LRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFNPYGRII 141
Query: 131 DLQILRGSQQT--------------SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+IL + SKG F++++ + +A A++ +NG +GSS P+
Sbjct: 142 TSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTVP-KGSSEPI 200
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VK+ ANN N + P P+ Y P QA+ YG
Sbjct: 201 TVKF------------------ANNPSNNNKAIP------PLAYLAP------QATRRYG 230
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAV- 295
P+ + G IP + P G A+
Sbjct: 231 ------GPIHHPTGRFRYIP-------------------------LSPLSSTGKAMLAIN 259
Query: 296 PGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFG 355
GLQ P G +L + L P + +G G +F+Y++ E
Sbjct: 260 KGLQRYSPLAGDLLANSML---------------PGNAMNGS----GWCIFVYNLAPETE 300
Query: 356 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 415
+ L F FG V S KV D T K FGFV+ + A AI +NG LG + L+
Sbjct: 301 ENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQ 360
Query: 416 VQLKRD 421
V K +
Sbjct: 361 VSFKTN 366
>gi|350425139|ref|XP_003494024.1| PREDICTED: ELAV-like protein 2-like [Bombus impatiens]
Length = 371
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 173/426 (40%), Gaps = 100/426 (23%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E + L V +P+ MT+ ++ ++F V+ +I+DK T S G FV ++A+K
Sbjct: 25 ESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEK 84
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A+N + + + ++V YA E ++ L++ LPKN+++ ++ LF+ YG I
Sbjct: 85 AINTLNGLRL---QNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFNPYGRII 141
Query: 131 DLQILRGSQQT--------------SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+IL + SKG F++++ + +A A++ +NG +GSS P+
Sbjct: 142 TSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTVP-KGSSEPI 200
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VK+ ANN N + P P+ Y P QA+ YG
Sbjct: 201 TVKF------------------ANNPSNNNKAIP------PLAYLAP------QATRRYG 230
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAV- 295
P+ + G IP + P G A+
Sbjct: 231 ------GPIHHPTGRFRYIP-------------------------LSPLSSTGKAMLAIN 259
Query: 296 PGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFG 355
GLQ P G +L + L P + +G G +F+Y++ E
Sbjct: 260 KGLQRYSPLAGDLLANSML---------------PGNAMNGS----GWCIFVYNLAPETE 300
Query: 356 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 415
+ L F FG V S KV D T K FGFV+ + A AI +NG LG + L+
Sbjct: 301 ENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQ 360
Query: 416 VQLKRD 421
V K +
Sbjct: 361 VSFKTN 366
>gi|402903006|ref|XP_003914376.1| PREDICTED: CUGBP Elav-like family member 4-like [Papio anubis]
Length = 500
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+
Sbjct: 166 DRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAIN 225
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 226 ALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 262
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 58/110 (52%), Gaps = 20/110 (18%)
Query: 319 GSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDK 378
G +S A P GP G NLFIYH+PQEFGD EL F FG
Sbjct: 411 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFG----------- 459
Query: 379 ATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQNKPY 428
FVS+++PASAQ AI MNG Q+G K+LKVQLKR N+PY
Sbjct: 460 ---------FVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 500
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
+E E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 158 QESGQKGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSS 216
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 217 HAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 256
>gi|223995723|ref|XP_002287535.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
gi|220976651|gb|EED94978.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
Length = 253
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLFI+HIP +F +QE+ F FG+VLSA++ V+ TG S+ FGFVSY+S SA
Sbjct: 63 GPEGANLFIFHIPNDFSNQEMYALFAQFGKVLSARIMVESDTGRSRGFGFVSYDSARSAA 122
Query: 399 NAIAMMNGCQLGGKKLKVQLKR 420
+AI+ +NG + GK+LKVQ K+
Sbjct: 123 DAISHLNGYSVKGKRLKVQHKQ 144
>gi|26329793|dbj|BAC28635.1| unnamed protein product [Mus musculus]
gi|34784979|gb|AAH57083.1| Brunol6 protein [Mus musculus]
Length = 345
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALRRMQQMAGQLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYN 225
HP+ LP+G Y
Sbjct: 119 -HPA---PLPLGACGAYT 132
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMTGASSSLVVKLADTDRERALRRM 108
>gi|169659189|dbj|BAG12779.1| putative RNA binding protein [Sorogena stoianovitchae]
Length = 103
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP GANLF++H+P E+ D +L F FG V+S +V DK TG SK FGFVSY++P SA
Sbjct: 3 GPAGANLFVFHLPNEWKDHDLYGHFSEFGNVISHRVMTDKQTGRSKGFGFVSYDNPVSAG 62
Query: 399 NAIAMMNGCQLGGKKLKVQLKR 420
AI MNG Q G K+LKV +K+
Sbjct: 63 MAITRMNGFQAGQKRLKVSIKK 84
>gi|383865034|ref|XP_003707981.1| PREDICTED: ELAV-like protein 2-like [Megachile rotundata]
Length = 502
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 172/426 (40%), Gaps = 99/426 (23%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E + L V +P+ MT+ ++ ++F V+ +I+DK T S G FV ++A+K
Sbjct: 25 ESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRSEDAEK 84
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A+N + L + ++V YA E ++ L++ LPKN+++ ++ LFS YG I
Sbjct: 85 AINTLNG---LRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGRII 141
Query: 131 DLQILRGSQQT--------------SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+IL + SKG F++++ + +A A++ +NG +GSS P+
Sbjct: 142 TSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTIP-KGSSEPI 200
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VK+ ANN N + P L Y P QA+ +G
Sbjct: 201 TVKF------------------ANNPSNNNKAIPPL-----AAYLTP------QATRRFG 231
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAV- 295
P+ + G IP + P G A+
Sbjct: 232 ------GPIHHPTGRFRYIP-------------------------LSPLSSTGKAMLAIN 260
Query: 296 PGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQEFG 355
GLQ P G +L + L P + +G G +F+Y++ E
Sbjct: 261 KGLQRYSPLAGDLLANSML---------------PGNAMNGS----GWCIFVYNLAPETE 301
Query: 356 DQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKKLK 415
+ L F FG V S KV D T K FGFV+ + A AI +NG LG + L+
Sbjct: 302 ENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQ 361
Query: 416 VQLKRD 421
V K +
Sbjct: 362 VSFKTN 367
>gi|325562907|gb|ADZ31337.1| cell size RNA recognition motif 2 [synthetic construct]
Length = 103
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 88 PLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG 144
P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D+ I++ + S+G
Sbjct: 3 PIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRG 62
Query: 145 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
C F+K+ ++E ALAA+ A++G + M G PL++++AD ++
Sbjct: 63 CGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKR 103
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ ++E+ + E KLFV + K T ++ +F + V++V I+KD R SRGC FV
Sbjct: 9 ADGERERHGAIEH-KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKD-GMRQSRGCGFV 66
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
SR+ A A++A + G PL +++AD
Sbjct: 67 KFSSREPALAAMSALSGNYVMRGCEQPLIIRFAD 100
>gi|429328279|gb|AFZ80039.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 525
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 63/86 (73%)
Query: 338 TGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASA 397
+GPPG+NLFI+HIP E+ +L +F FGRV+SA++ DK+TG K + FVSY++P SA
Sbjct: 421 SGPPGSNLFIFHIPNEWTYNDLVRSFSQFGRVISARIATDKSTGRHKGYAFVSYDNPDSA 480
Query: 398 QNAIAMMNGCQLGGKKLKVQLKRDNK 423
A+A MNG + GK+LKV +K+ ++
Sbjct: 481 SQAVANMNGFTVLGKRLKVTVKKGDE 506
>gi|12239369|gb|AAG49448.1|AF141345_1 LYST-interacting protein LIP9 [Homo sapiens]
Length = 213
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 65/105 (61%)
Query: 94 ADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETK 153
A G+ R + KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY +
Sbjct: 26 ACGQRXRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSH 85
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+A A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 86 AEARPPFNALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMVGQ 130
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA NA
Sbjct: 36 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEARPPFNA 94
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 95 LHGSQTMPGASSSLVVKFADTDKERTMRRM 124
>gi|380027075|ref|XP_003697261.1| PREDICTED: ELAV-like protein 2-like [Apis florea]
Length = 362
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 172/428 (40%), Gaps = 113/428 (26%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E + L V +P+ MT+ ++ ++F V+ +I+DK T S G FV ++A+K
Sbjct: 25 ESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEK 84
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A+N + + + ++V YA E ++ L++ LPKN+++ ++ LFS YG I
Sbjct: 85 AINTLNGLRL---QNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGRII 141
Query: 131 DLQILRGSQQT--------------SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+IL + SKG F++++ + +A A++ +NG +GSS P+
Sbjct: 142 TSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTIP-KGSSEPI 200
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VK+ ANN N + P P+ Y P QA+ YG
Sbjct: 201 TVKF------------------ANNPSNNNKAIP------PLAYLTP------QATRRYG 230
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
GP ++ P+G +G +
Sbjct: 231 ---------------------------------------GPIHH---PTGRFSTGKAMLA 248
Query: 297 ---GLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIYHIPQE 353
GLQ P G +L + L P + +G G +F+Y++ E
Sbjct: 249 INKGLQRYSPLAGDLLANSML---------------PGNAMNGS----GWCIFVYNLAPE 289
Query: 354 FGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQLGGKK 413
+ L F FG V S KV D T K FGFV+ + A AI +NG LG +
Sbjct: 290 TEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRV 349
Query: 414 LKVQLKRD 421
L+V K +
Sbjct: 350 LQVSFKTN 357
>gi|260787640|ref|XP_002588860.1| hypothetical protein BRAFLDRAFT_89423 [Branchiostoma floridae]
gi|229274031|gb|EEN44871.1| hypothetical protein BRAFLDRAFT_89423 [Branchiostoma floridae]
Length = 204
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 99 ERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQAL 157
ER+E KLF+GML K +E +V LF +GTI++ ILRG SKGCAF+K+ + +A
Sbjct: 25 ERVEDRKLFVGMLGKQQTEEDVRRLFDPFGTIEECTILRGPDGQSKGCAFVKFSSHAEAQ 84
Query: 158 AALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
AA+ ++G M G+S +VVK+ADT+KERQ R+ Q+
Sbjct: 85 AAINNLHGSQTMPGASSSIVVKFADTDKERQLRKMQQ 121
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ + + E+R KLFVG + K TE + +F F ++E I++ + S+GC FV
Sbjct: 20 TMRHAERVEDR-KLFVGMLGKQQTEEDVRRLFDPFGTIEECTILRGPDGQ-SKGCAFVKF 77
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A+N H +T+PGASS + VK+AD + ER K+
Sbjct: 78 SSHAEAQAAINNLHGSQTMPGASSSIVVKFADTDKERQLRKM 119
>gi|17532863|ref|NP_496057.1| Protein EXC-7 [Caenorhabditis elegans]
gi|3876753|emb|CAA85327.1| Protein EXC-7 [Caenorhabditis elegans]
Length = 456
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 189/431 (43%), Gaps = 43/431 (9%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E + L + +P+ MT+ ++ ++F ++ +++DK T S G FV ++A +
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIK 130
AV++ + + + ++V YA ++++ L++ +PK+++ E+ ++F +G I
Sbjct: 99 AVSSFNGLRL---QNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQII 155
Query: 131 DLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA-------- 181
+IL + SKG F++++ K++A A++ +NG G S + VK+A
Sbjct: 156 TSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIP-SGCSEQITVKFANNPASNNP 214
Query: 182 -----DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
D E +QA S + A + + G PM +AP + Y Y G+
Sbjct: 215 KGLLSDLEAVQQAATTLVPLS---TILGAPTLRATAGGIGPMHHAPITSKYRYSPMGAIT 271
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRG--------ASPDLSSNMGPRNYAMPPSGFV 288
+ + + ++Q NA+ G A PD ++++
Sbjct: 272 AVSQPTATLPADYLTTSALLQMSQLNALAGLNPFATATAVPDFTASLIAHQQQQHAVAQQ 331
Query: 289 GSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGPPGANLFIY 348
+ A P P G + + ++S +VA + P + ++G LF+Y
Sbjct: 332 HAAQTASP------PATNGQVAGLAAHAQLSALSASVAATLPPSDTAGYC------LFVY 379
Query: 349 HIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAIAMMNGCQ 408
++ + D L F FG +++ K+ D T K + FVS + A NA+ +NG
Sbjct: 380 NLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNYTEAYNAMLSLNGTN 438
Query: 409 LGGKKLKVQLK 419
L GK L+V K
Sbjct: 439 LAGKTLQVVFK 449
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
G NL I ++PQ +E+ + F + G + S K+ DK TG S +GFV+Y A
Sbjct: 38 GESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDAL 97
Query: 399 NAIAMMNGCQLGGKKLKVQLKR-DNKQNK 426
A++ NG +L K +KV R N Q K
Sbjct: 98 RAVSSFNGLRLQNKTIKVSYARPSNDQIK 126
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 342 GANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQNAI 401
G+NL++ IP+ EL + F+ FG+++++++ D TG+SK GFV ++ A AI
Sbjct: 127 GSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAI 186
Query: 402 AMMNGCQLGG--KKLKVQLKRDNKQNKP 427
+NG G +++ V+ + N P
Sbjct: 187 KTLNGSIPSGCSEQITVKFANNPASNNP 214
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S +++K L+V +PK MT +L ++F+ F + I+ D T S+G FV +
Sbjct: 121 SNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKD 180
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD 95
EAD A+ N G S + VK+A+
Sbjct: 181 EADVAIKTL-NGSIPSGCSEQITVKFAN 207
>gi|242003642|ref|XP_002436197.1| conserved hypothetical protein [Ixodes scapularis]
gi|215499533|gb|EEC09027.1| conserved hypothetical protein [Ixodes scapularis]
Length = 170
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 70/103 (67%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLFIGML K +E++V +FS +G+I++ +LR SKGCAF+ Y +++ A+ A++
Sbjct: 6 ERKLFIGMLAKECNESDVRVMFSPFGSIEECTVLRDGSGQSKGCAFVTYASRQCAINAIK 65
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPN 204
A+N M+G + P+VVK+ADT+KE++ +R Q+ + + N
Sbjct: 66 AMNHSQTMKGCNNPMVVKFADTQKEKEQKRQQQVMTNLWTMAN 108
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+G + K E+ + MF F ++E +++D + + S+GC FV SRQ A A+ A
Sbjct: 8 KLFIGMLAKECNESDVRVMFSPFGSIEECTVLRDGSGQ-SKGCAFVTYASRQCAINAIKA 66
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHK 104
++ +T+ G ++P+ VK+AD + E+ + +
Sbjct: 67 MNHSQTMKGCNNPMVVKFADTQKEKEQKR 95
>gi|298714689|emb|CBJ27614.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 473
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%)
Query: 339 GPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYESPASAQ 398
GP G NLF++HIP ++ L F FG V+SA++ V+KATG S+ FGFVSY++ SA+
Sbjct: 157 GPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAE 216
Query: 399 NAIAMMNGCQLGGKKLKVQLKRDNKQNK 426
AI+ MNG Q+ K+LKVQ K+D ++ +
Sbjct: 217 KAISQMNGYQIEHKRLKVQHKKDKERER 244
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
LFV +P MT L +F +F V I+ +K T SRG FV +R A+KA++
Sbjct: 163 LFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAIS 220
>gi|156086340|ref|XP_001610579.1| RNA binding motif containing protein [Babesia bovis T2Bo]
gi|154797832|gb|EDO07011.1| RNA binding motif containing protein [Babesia bovis]
Length = 278
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 332 TSSSGGTGPPGANLFIYHIPQEFGDQELGNAFQAFGRVLSAKVFVDKATGVSKCFGFVSY 391
++S GPPG+NLF++H+P E+ D +L FQ+FG ++SA+V +D G ++ +GFVSY
Sbjct: 155 VTNSASYGPPGSNLFVFHLPPEWSDSDLLLHFQSFGTIVSARVQLD-TVGRNRGYGFVSY 213
Query: 392 ESPASAQNAIAMMNGCQLGGKKLKVQLKRDNKQ 424
++P SA AI MNG + GK LKVQLKR +Q
Sbjct: 214 DNPTSALTAIKNMNGYSVCGKYLKVQLKRGEEQ 246
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
K+FIG +P +V E ++ + +G +K + + S G AF Y +AA+ AI
Sbjct: 14 KIFIGCIPGDVLEDQLRWELAKFGNLKSIFYMPDLGHESMGWAFATYNDHYSGIAAVNAI 73
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP 203
N + GS+VP ++ R A+ K + N P
Sbjct: 74 NDELFFAGSNVPCKAQFV---TPRSAQEYTKLKGNTRNWP 110
>gi|290986619|ref|XP_002676021.1| hypothetical protein NAEGRDRAFT_4931 [Naegleria gruberi]
gi|284089621|gb|EFC43277.1| hypothetical protein NAEGRDRAFT_4931 [Naegleria gruberi]
Length = 141
Score = 93.6 bits (231), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 16/141 (11%)
Query: 28 EAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87
E L +F +F V E+ +I+D+ T SRGC FV S+Q+AD + + + LP
Sbjct: 1 EDNLYPLFSQFGPVAEIVVIRDRFTFKSRGCAFVSFRSKQDADTCIRELNQRLKLP---- 56
Query: 88 PLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
P+ + A L L E+KLFI +PKNV+E E+S LF +G I D+ +L
Sbjct: 57 PVNLTIASNFLSCLNIDKYEIGVPHPENKLFIRNIPKNVTEDELSTLFESFGEILDVVVL 116
Query: 136 RGSQQTSKGCAFLKYETKEQA 156
R + TSKGC F+K+ E A
Sbjct: 117 RTTIHTSKGCGFIKFTNSESA 137
Score = 40.4 bits (93), Expect = 1.8, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
KLF+ +PK++TE +L +F+ F + +V +++ T S+GC F+ + + AD +
Sbjct: 85 KLFIRNIPKNVTEDELSTLFESFGEILDVVVLR-TTIHTSKGCGFIKFTNSESADMVI 141
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,137,088,790
Number of Sequences: 23463169
Number of extensions: 327629520
Number of successful extensions: 849743
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14330
Number of HSP's successfully gapped in prelim test: 9597
Number of HSP's that attempted gapping in prelim test: 761502
Number of HSP's gapped (non-prelim): 79039
length of query: 428
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 283
effective length of database: 8,957,035,862
effective search space: 2534841148946
effective search space used: 2534841148946
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 78 (34.7 bits)