estExt_fgenesh4_pm.C_410051 protein (Populus trichocarpa)

STRING 9.05

estExt_fgenesh4_pm.C_410051 protein (Populus trichocarpa) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	estExt_fgenesh4_pm.C_410051	hypothetical protein (426 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00031274	aminoacyl-tRNA ligase (EC-6.1.1.2) (404 aa)	•	•	•	0.809
	estExt_fgenesh4_pg.C_LG_II2313	hypothetical protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro ass [...] (126 aa)	•		•	0.782
	gw1.XI.1444.1	aminoacyl-tRNA ligase (EC-6.1.1.4) (889 aa)	•	•	•	0.751
	gw1.IV.3343.1	annotation not avaliable (109 aa)	•		•	0.744
	estExt_Genewise1_v1.C_LG_VI2599	hypothetical protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between [...] (208 aa)	•	•	•	0.731
	gw1.X.2264.1	hypothetical protein (594 aa)		•	•	0.705
	estExt_fgenesh4_pg.C_LG_XVIII0906	hypothetical protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between [...] (278 aa)	•	•	•	0.695
	gw1.VIII.2106.1	threonine-tRNA ligase (EC-6.1.1.3) (669 aa)	•		•	0.684
	fgenesh4_pm.C_LG_IX000007	hypothetical protein (574 aa)		•	•	0.671
	gw1.X.6174.1	annotation not avaliable (674 aa)	•		•	0.670

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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