BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014218
(428 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94K73|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=At3g58140 PE=1 SV=1
Length = 429
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/431 (74%), Positives = 374/431 (86%), Gaps = 5/431 (1%)
Query: 1 MATSLANTTFFSKTCSLFIHTNSLKRFAFRVPFSSTSTSTSPLPLKKKWRPPAASALELG 60
M +T FS+ + +N KRF+F FSS++ + SP P +K R P SA+++G
Sbjct: 1 MTVFSVQSTIFSRASVALLSSNGFKRFSFVSSFSSSA-AYSP-PKMRKRRYPIVSAVDIG 58
Query: 61 GVKMAKDDIVR-DDPTNNVPDTIFTKLGMQLHKRNQHPIGILKNAIYEYFDSNYPNKFNK 119
GV +A++D+VR DDPTNNVPD+IF+KLGMQLH+R++HPIGILKNAIY+YFDSNY NKF K
Sbjct: 59 GVAIARNDVVREDDPTNNVPDSIFSKLGMQLHRRDKHPIGILKNAIYDYFDSNYSNKFEK 118
Query: 120 FDDLCPIVSVKQNFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKE-HNHFL 178
F+DL PIV+ KQNFDDVLVPADHVSRS NDTYYVDSQTVLRCHTSAHQAELL++ H+ FL
Sbjct: 119 FEDLSPIVTTKQNFDDVLVPADHVSRSLNDTYYVDSQTVLRCHTSAHQAELLRKGHSRFL 178
Query: 179 VTGDVYRRDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLF 238
VTGDVYRRDSIDSTHYPVFHQMEG +F P++W +G D+T YAA+DLK+CLEGLARHLF
Sbjct: 179 VTGDVYRRDSIDSTHYPVFHQMEGFCVFSPEDWNGSGKDSTLYAAEDLKKCLEGLARHLF 238
Query: 239 GAVEMRWVDTYFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGL 298
G+VEMRWVDTYFPFTNPS+ELEI+FKE+WLEVLGCGVTEQ ILK+SG NNVAWAFGLGL
Sbjct: 239 GSVEMRWVDTYFPFTNPSFELEIYFKEDWLEVLGCGVTEQVILKQSGLENNVAWAFGLGL 298
Query: 299 ERLAMVLFDIPDIRLFWSSDERFTSQFSQGQLGIKFKPFSKYPPCYKDMSFWINESFTEN 358
ERLAMVLFDIPDIR FWSSDERFTSQF +G+LG+KFKP+SKYPPCYKD+SFWI++ FTEN
Sbjct: 299 ERLAMVLFDIPDIRFFWSSDERFTSQFGKGELGVKFKPYSKYPPCYKDISFWISDLFTEN 358
Query: 359 NLCEVVRGVAGDLVEEVRLIDNFTN-KKGMTSHCYRIAYRSMERSLTDEDINELQWNVRE 417
N CEVVRG+AGDLVEEV+LID FTN KKG+TSHCYRI +RSMERSLTDE++N+LQ VR+
Sbjct: 359 NFCEVVRGIAGDLVEEVKLIDQFTNKKKGLTSHCYRIVFRSMERSLTDEEVNDLQSKVRD 418
Query: 418 QVQSKLNVVLR 428
+VQ KLNV LR
Sbjct: 419 EVQKKLNVELR 429
>sp|Q86A68|SYFM_DICDI Phenylalanine--tRNA ligase, mitochondrial OS=Dictyostelium
discoideum GN=mpheS PE=3 SV=1
Length = 454
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/417 (47%), Positives = 262/417 (62%), Gaps = 53/417 (12%)
Query: 65 AKDDIVRDDPTN-NVPDTIFTKLGMQLHKRNQHPIGILKNAIYEYFD---SNYPNKFNKF 120
K D + P N N+ +I K+G LH + HP+ I+K I +F S+ +KF F
Sbjct: 38 GKIDYTKLIPENGNISKSITEKIGKNLHCKRDHPLNIIKKKIQYHFQNKLSDEEHKFQFF 97
Query: 121 DDLCPIVSVKQNFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHNH-FLV 179
D P VSVK+NFD++L P DHV RS NDTYY +LR HTSAHQ++LL+E FLV
Sbjct: 98 DSFEPKVSVKENFDELLFPVDHVGRSPNDTYYFSKDQLLRTHTSAHQSQLLREQEKAFLV 157
Query: 180 TGDVYRRDSIDSTHYPVFHQMEGVSIF------------------YPDEWGAAGLDATEY 221
TGDVYRRD+ID+ HYPVFHQMEGV +F Y ++ L + +
Sbjct: 158 TGDVYRRDTIDAVHYPVFHQMEGVKVFKDKVNLAIDGKPFDETIDYYEDNNYKQLQSVKD 217
Query: 222 AAKDLKRCLEGLARHLFGA-VEMRWVDTYFPFTNPSYELEIFFKENWLEVLGCGVTEQEI 280
KDLK+ LE + R + G +++RW+D YFPFT+PS+E+EI+F+ WLEVLGCGV I
Sbjct: 218 VEKDLKQSLESMIRSVIGQDLQVRWIDAYFPFTSPSFEMEIYFQGQWLEVLGCGVVHPSI 277
Query: 281 LKRSGKLNNVAWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFSQGQ----------- 329
+ G N+ AWAFG+GLERLAM+LF+IPDIRLFW+ D RF +QF
Sbjct: 278 MNNCGLSNDRAWAFGIGLERLAMILFNIPDIRLFWTEDNRFHNQFKGVDKSISTSSSSSS 337
Query: 330 ---------------LGIKFKPFSKYPPCYKDMSFWI--NESFTENNLCEVVRGVAGDLV 372
G++F+ FSKYP C+KD+SFW+ E+F EN E VR GDLV
Sbjct: 338 SSSSSSSSTLSDIDIKGVQFQQFSKYPSCFKDVSFWLEDEENFHENKFYEFVRESCGDLV 397
Query: 373 EEVRLIDNFTNKK-GMTSHCYRIAYRSMERSLTDEDINELQWNVREQVQSKLNVVLR 428
E V L+DNFTNKK TSHCYRI YRSM+R+LT+E+I+ LQ+N+RE++++ L+V LR
Sbjct: 398 ERVDLVDNFTNKKLNKTSHCYRIYYRSMDRNLTNEEIDILQFNLREKLENHLSVKLR 454
>sp|O16129|SYFM_DROME Probable phenylalanine--tRNA ligase, mitochondrial OS=Drosophila
melanogaster GN=Aats-phe PE=2 SV=3
Length = 453
Score = 354 bits (909), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 191/447 (42%), Positives = 262/447 (58%), Gaps = 61/447 (13%)
Query: 34 SSTSTSTSPLPLKKKWRPPAASALELGGVKMAKDDIVRDDPTNNVPDTIFTKLGMQLHKR 93
S+ ++S P K PP LE+ G A D NV I + +G H +
Sbjct: 16 STRCLASSAAPAKSPSSPPQ---LEVSGSTYATDG------WTNVTPKILSYVGANKHLQ 66
Query: 94 NQHPIGILKNAIYEYFDSNYPNK-----FNKFDDLCPIVSVKQNFDDVLVPADHVSRSYN 148
HP+ I++ I YF Y N+ F+ +D + P+V+V+QNFD++L+PADHVSR +
Sbjct: 67 TDHPLSIIRQRIVNYFYGAYRNQRGNPLFSVYDQMNPVVTVQQNFDNLLIPADHVSRQKS 126
Query: 149 DTYYVDSQTVLRCHTSAHQAELLKEH-NHFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFY 207
D YY++ Q +LR HT+AHQ EL+ ++FLV G+VYRRD IDSTHYPVFHQ + V +
Sbjct: 127 DCYYINQQHLLRAHTTAHQVELISGGLDNFLVVGEVYRRDEIDSTHYPVFHQADAVRLVT 186
Query: 208 PDE--------------WGAA----------------------GLDATEYAAKDLKRCLE 231
D+ W L+A + ++K L
Sbjct: 187 KDKLFERNPGLELFEETWSGTLADPKLILPSSKFMDQTKQPCHTLEAVKLMEHEMKHVLV 246
Query: 232 GLARHLFGA-VEMRWVDTYFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNV 290
GL + LFG ++ RWVDTYFPFT PS+ELEI+FK+NWLEVLGCG+ EIL+RSG ++
Sbjct: 247 GLTKDLFGPRIKYRWVDTYFPFTQPSWELEIYFKDNWLEVLGCGIMRHEILQRSGVHQSI 306
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFSQGQLG--IKFKPFSKYPPCYKDMS 348
+AFG+GLERLAMVLFDIPDIRLFWS+D F SQFS+ L K+KP S YP C D+S
Sbjct: 307 GYAFGVGLERLAMVLFDIPDIRLFWSNDSGFLSQFSEKDLHNLPKYKPISHYPQCTNDLS 366
Query: 349 FW------INESFTENNLCEVVRGVAGDLVEEVRLIDNFTN-KKGMTSHCYRIAYRSMER 401
FW ++ F+ N+ ++VR VAGD+VE++ L+D F + K G +S C+RI YR MER
Sbjct: 367 FWLPQDIEVDAGFSPNDFYDLVRSVAGDMVEQISLVDKFKHPKTGKSSVCFRIVYRHMER 426
Query: 402 SLTDEDINELQWNVREQVQSKLNVVLR 428
+LT ++NE+ + NV +R
Sbjct: 427 TLTQAEVNEIHKQIASASVDSFNVQIR 453
>sp|Q99M01|SYFM_MOUSE Phenylalanine--tRNA ligase, mitochondrial OS=Mus musculus GN=Fars2
PE=2 SV=1
Length = 451
Score = 354 bits (908), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 253/421 (60%), Gaps = 40/421 (9%)
Query: 39 STSPLPLKKKWRPPAASALELGGVKMAKDDIVRDDPTNNVPDTIFTKLGMQLHKRNQHPI 98
S+ P + + S LE+ G +DD N+ + +K+G LH + HP+
Sbjct: 33 SSKPAASQSAVQGAPGSVLEILGKSYPQDD------HTNLTQKVLSKVGRNLHNQKFHPL 86
Query: 99 GILKNAIYEYFDSNYPNK-----FNKFDDLCPIVSVKQNFDDVLVPADHVSRSYNDTYYV 153
++K + E+F Y + F+ +D L P+V+ QNFD +L+PADH SR D YY+
Sbjct: 87 WLIKERVKEHFYQQYMVRSRTPLFSVYDQLPPVVTTWQNFDSLLIPADHPSRKKGDNYYL 146
Query: 154 DSQTVLRCHTSAHQAELLKEH-NHFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFYPDEWG 212
+ +LR HTSAHQ +LL N FLV GDVYRRD ID HYPVFHQ+EGV +F E
Sbjct: 147 NRAHMLRAHTSAHQWDLLHAGLNAFLVVGDVYRRDQIDCQHYPVFHQLEGVRLFSKHELF 206
Query: 213 AA-----------------------GLDATEYAAKDLKRCLEGLARHLFG-AVEMRWVDT 248
A ++A + DLK+ L L HLFG +E+RWVD
Sbjct: 207 AGVKDGESLQLFEEGSRSAHKQETHTMEAVKLVEFDLKQVLTRLVTHLFGDGLEVRWVDC 266
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDI 308
YFPFT+PS+E+EI F+ WLEVLGCGV EQ+++ +G + + WAFGLGLERLAMVL+DI
Sbjct: 267 YFPFTHPSFEMEINFRGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMVLYDI 326
Query: 309 PDIRLFWSSDERFTSQF--SQGQLGIKFKPFSKYPPCYKDMSFWI-NESFTENNLCEVVR 365
PDIRLFWS DERF QF S +KF+P SKYP + D+SFW+ +E++TEN+ ++VR
Sbjct: 327 PDIRLFWSEDERFLKQFLLSDINQSVKFQPLSKYPAVFNDISFWLPSENYTENDFYDIVR 386
Query: 366 GVAGDLVEEVRLIDNFTN-KKGMTSHCYRIAYRSMERSLTDEDINELQWNVREQVQSKLN 424
V GDLVE+V LID F + K TSHCYRI YR MER+L+ ++ + V+E L
Sbjct: 387 TVGGDLVEKVDLIDKFEHPKTHRTSHCYRITYRHMERTLSQREVGNVHQAVQEAAVQLLG 446
Query: 425 V 425
V
Sbjct: 447 V 447
>sp|Q6AYQ3|SYFM_RAT Phenylalanine--tRNA ligase, mitochondrial OS=Rattus norvegicus
GN=Fars2 PE=2 SV=1
Length = 472
Score = 350 bits (897), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/434 (43%), Positives = 256/434 (58%), Gaps = 61/434 (14%)
Query: 52 PAASALELGG-----VKMAKDDIVRDDPTNNVPDTIFTKLGMQLHKRNQHPIGILKNAIY 106
PAAS + G +++ +DD TN + + +K+G LH + HP+ ++K +
Sbjct: 36 PAASQFAVQGAPGRVLELLGKSYPQDDHTN-LTQKVLSKVGRNLHNQKFHPLWLIKERVK 94
Query: 107 EYFDSNYPNK-----FNKFDDLCPIVSVKQNFDDVLVPADHVSRSYNDTYYVDSQTVLRC 161
E+F Y + F+ +D L P+V+ QNFD +L+PADH SR D YY++ +LR
Sbjct: 95 EHFYQQYMGRSRTPLFSVYDQLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRGHMLRA 154
Query: 162 HTSAHQAELLKEH-NHFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFYPDEWGAA------ 214
HTSAHQ +LL N FLV GDVYRRD IDS HYPVFHQ+EGV +F E A
Sbjct: 155 HTSAHQWDLLHAGLNAFLVVGDVYRRDQIDSQHYPVFHQLEGVRLFSKHELFAGVKDGES 214
Query: 215 -----------------GLDATEYAAKDLKRCLEGLARHLFG-AVEMRWVDTYFPFTNPS 256
++A + DLK+ L L HLFG +E+RWVD YFPFT+PS
Sbjct: 215 LQLFEESSRSAHKQETHTMEAVKLVEFDLKQVLTRLVTHLFGDGLEVRWVDCYFPFTHPS 274
Query: 257 YELEIFFKENWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDIPDIRLFWS 316
+E+EI F+ WLEVLGCGV EQ+++ +G + + WAFGLGLERLAMVL+DIPDIRLFWS
Sbjct: 275 FEMEINFRGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMVLYDIPDIRLFWS 334
Query: 317 SDERFTSQFS-----------------------QGQLGIKFKPFSKYPPCYKDMSFWI-N 352
DERF QF Q ++G + PFSKYP + D+SFW+ +
Sbjct: 335 EDERFLKQFRLSDINQSVKFQRWFFQEERATGIQRKMGRQLCPFSKYPAVFNDISFWLPS 394
Query: 353 ESFTENNLCEVVRGVAGDLVEEVRLIDNFTN-KKGMTSHCYRIAYRSMERSLTDEDINEL 411
E++TEN+ ++VR V GDLVE+V LID F + K TSHCYRI YR MER+L+ +++ +
Sbjct: 395 ENYTENDFYDIVRTVGGDLVEKVDLIDKFEHPKTHRTSHCYRITYRHMERTLSQREVSSV 454
Query: 412 QWNVREQVQSKLNV 425
V+E L V
Sbjct: 455 HQAVQEAAVQLLGV 468
>sp|O95363|SYFM_HUMAN Phenylalanine--tRNA ligase, mitochondrial OS=Homo sapiens GN=FARS2
PE=1 SV=1
Length = 451
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 250/419 (59%), Gaps = 49/419 (11%)
Query: 50 RPPAA---------SALELGGVKMAKDDIVRDDPTNNVPDTIFTKLGMQLHKRNQHPIGI 100
RPPAA S +EL G +DD +N+ + T++G LH + HP+ +
Sbjct: 35 RPPAAECATQRAPGSVVELLGKSYPQDD------HSNLTRKVLTRVGRNLHNQQHHPLWL 88
Query: 101 LKNAIYEYFDSNYPNKFNK-----FDDLCPIVSVKQNFDDVLVPADHVSRSYNDTYYVDS 155
+K + E+F Y +F +D+L P+V+ QNFD +L+PADH SR D YY++
Sbjct: 89 IKERVKEHFYKQYVGRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNR 148
Query: 156 QTVLRCHTSAHQAELLKEH-NHFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFYPDEWGAA 214
+LR HTSAHQ +LL + FLV GDVYRRD IDS HYP+FHQ+E V +F E A
Sbjct: 149 THMLRAHTSAHQWDLLHAGLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAG 208
Query: 215 -----------------------GLDATEYAAKDLKRCLEGLARHLFG-AVEMRWVDTYF 250
++A + DLK+ L L HLFG +E+RWVD YF
Sbjct: 209 IKDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYF 268
Query: 251 PFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDIPD 310
PFT+PS+E+EI F WLEVLGCGV EQ+++ +G + + WAFGLGLERLAM+L+DIPD
Sbjct: 269 PFTHPSFEMEINFHGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMILYDIPD 328
Query: 311 IRLFWSSDERFTSQFSQGQLG--IKFKPFSKYPPCYKDMSFWI-NESFTENNLCEVVRGV 367
IRLFW DERF QF + +KF+P SKYP D+SFW+ +E++ EN+ ++VR +
Sbjct: 329 IRLFWCEDERFLKQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYAENDFYDLVRTI 388
Query: 368 AGDLVEEVRLIDNFTN-KKGMTSHCYRIAYRSMERSLTDEDINELQWNVREQVQSKLNV 425
GDLVE+V LID F + K TSHCYRI YR MER+L+ ++ + ++E L V
Sbjct: 389 GGDLVEKVDLIDKFVHPKTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQLLGV 447
>sp|O74952|SYFM_SCHPO Phenylalanine--tRNA ligase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mfs1 PE=3 SV=1
Length = 429
Score = 331 bits (849), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 182/410 (44%), Positives = 242/410 (59%), Gaps = 55/410 (13%)
Query: 70 VRDDPTNNVPDTIFTKLGMQLHKRNQHPIGILKNAIYEYFDSNYPNKFNKFDDLCPIVSV 129
V+ D +NVP+ I +K+G L ++ HPI L+ + + F N K PIVSV
Sbjct: 24 VQTDSWSNVPEHIHSKIGRNLFQKEGHPICSLRQLLEQQFQKFEMNNVQK---ESPIVSV 80
Query: 130 KQNFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAE----LLKE---HNHFLVTGD 182
+ NFD + P HVSRS +DTYY++++T LR HTSAHQ E L KE N FL+T D
Sbjct: 81 ETNFDSLGFPKTHVSRSKSDTYYMNNKTCLRTHTSAHQPEEFSRLAKEGFKKNGFLITAD 140
Query: 183 VYRRDSIDSTHYPVFHQMEGVSIF----------------------------------YP 208
VYRRD +DS+HYP+FHQMEG ++ +
Sbjct: 141 VYRRDEVDSSHYPIFHQMEGALVWNRNDTAKMKNDLKKVALSPSLKSMVDDETTALETHN 200
Query: 209 DEWGAAGLDATEYAAKDLKRCLEGLARHLF--------GA--VEMRWVDTYFPFTNPSYE 258
D L+ T++ ++ LK L + L GA V RW FPFT PS++
Sbjct: 201 DMQDIYSLEETKFVSQHLKDTLTTVIHDLVSLAPSISSGAEQVRYRWTYDSFPFTKPSFQ 260
Query: 259 LEIFFKENWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDIPDIRLFWSSD 318
LEI +K WLE+LGCGV + +LK +G N + WAFG+GLERLAM+L+ IPDIRLFWS D
Sbjct: 261 LEIDWKGKWLEILGCGVVQDRLLKGAGLNNYIGWAFGIGLERLAMILYGIPDIRLFWSLD 320
Query: 319 ERFTSQFSQGQLGIKFKPFSKYPPCYKDMSFWINESFTENNLCEVVRGVAGDLVEEVRLI 378
ERF+ QF ++ FKPFSKYP C+KD++FWIN F N+ E++R V D+VE V LI
Sbjct: 321 ERFSKQFLPNKIST-FKPFSKYPACFKDIAFWINNDFNPNDFYEIIRDVCQDMVESVNLI 379
Query: 379 DNFTNKKGMTSHCYRIAYRSMERSLTDEDINELQWNVREQVQSKLNVVLR 428
D +T K G TS CYR+ YRSMERSL +E+I++LQ +R +V + L V LR
Sbjct: 380 DQYTAKSGKTSLCYRVNYRSMERSLRNEEIDKLQEKLRNRVANSLRVELR 429
>sp|P08425|SYFM_YEAST Phenylalanine--tRNA ligase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MSF1 PE=1
SV=3
Length = 469
Score = 298 bits (764), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/453 (36%), Positives = 253/453 (55%), Gaps = 89/453 (19%)
Query: 57 LELGGVKMAKDDIVRDDPTNNVPDTIFTKLGMQLHKRNQHPIGILKNAIYEYFDSNYPNK 116
+E+ G+K D T NV D+I LH + HP+GIL++ I + +S N
Sbjct: 25 VEINGIKYKTDP-----QTTNVTDSIIKLTDRSLHLKESHPVGILRDLIEKKLNS-VDNT 78
Query: 117 FNKFDDLCPIVSVKQNFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKE--- 173
F F++ P+V+ +NFD + P DH RS +DTYY++ +LR HTSAH+ E ++
Sbjct: 79 FKIFNNFKPVVTTMENFDSLGFPKDHPGRSKSDTYYINETHLLRTHTSAHELECFQKIRN 138
Query: 174 -----HNHFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFY--------------------- 207
+ FL++ DVYRRD ID THYPVFHQMEG +I+
Sbjct: 139 DSDNIKSGFLISADVYRRDEIDKTHYPVFHQMEGATIWKRTKADVGVKEPMYIEKIREDI 198
Query: 208 ---------------------------PDEWGAAGLDATEYAAKDLKRCLEGLARHLFGA 240
P + + L+ + ++ LKR +E + +F
Sbjct: 199 RQVENLLNKENVKITVDDDTIPLKENNPKQEYMSDLEV-DLCSQHLKRSIELIVSEVFNK 257
Query: 241 ----------------VEMRWVDTYFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRS 284
+++RW++ YFP+T PS+E+E++++ WLE+ GCG+ Q++L R+
Sbjct: 258 KISSMIKNKANNTPKELKVRWINAYFPWTAPSWEIEVWWQGEWLELCGCGLIRQDVLLRA 317
Query: 285 G--KLNNVAWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFSQGQLGIKFKPFSKYPP 342
G + WAFGLGL+R+AM+LF+IPDIRL WS DERF+ QFS+G L FKP+SK+P
Sbjct: 318 GYKPSETIGWAFGLGLDRIAMLLFEIPDIRLLWSRDERFSRQFSKG-LITSFKPYSKHPG 376
Query: 343 CYKDMSFWINE------SFTENNLCEVVRGVAGDLVEEVRLIDNFTN-KKGMTSHCYRIA 395
++D++FW+ E EN+L E++R +AGDLVE V+L+D+FT+ K G S CYRI
Sbjct: 377 SFRDVAFWLPEDKPDIHQVHENDLMEIIRNIAGDLVESVKLVDSFTHPKTGRKSMCYRIN 436
Query: 396 YRSMERSLTDEDINELQWNVREQVQSKLNVVLR 428
Y+SM+R+LT+ ++N LQ V ++ + +V LR
Sbjct: 437 YQSMDRNLTNAEVNTLQDMVCSKLVKEYSVELR 469
>sp|B0C6I2|SYFA_ACAM1 Phenylalanine--tRNA ligase alpha subunit OS=Acaryochloris marina
(strain MBIC 11017) GN=pheS PE=3 SV=1
Length = 330
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 112/199 (56%), Gaps = 17/199 (8%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + P DH +R DT+Y+ +LR HTSA Q +++H G YRRD+
Sbjct: 144 NFEALNTPPDHPARDMQDTFYLPDGNLLRTHTSAVQIHYMEDHEPPIRIAAPGRCYRRDT 203
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDT 248
D+TH VFHQ+E +++ GL T DLK ++ +FG V +R+ +
Sbjct: 204 EDATHAAVFHQIEILAV-------DKGLTFT-----DLKGTIKVFIEQMFGDVPIRFRAS 251
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNV--AWAFGLGLERLAMVLF 306
YFPFT PS E+++ +K WLEVLGCG+ + +LK G V +A G G+ER AMVL
Sbjct: 252 YFPFTEPSAEVDVQWKGRWLEVLGCGMVDPNVLKNVGYDPEVYTGFAAGFGVERFAMVLH 311
Query: 307 DIPDIRLFWSSDERFTSQF 325
I DIR ++SD RF QF
Sbjct: 312 QIDDIRRLYTSDLRFLRQF 330
>sp|Q8YMT4|SYFA_NOSS1 Phenylalanine--tRNA ligase alpha subunit OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=pheS PE=3 SV=1
Length = 330
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 117/199 (58%), Gaps = 17/199 (8%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + P DH +R DT+Y+ +LR HTS+ Q +++ H + G VYRRD+
Sbjct: 144 NFEALNTPPDHPARDMQDTFYLPDGNLLRTHTSSVQIRYMEKEEPPIHIVAPGRVYRRDN 203
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDT 248
+D+TH VFHQ+E ++I DE GL T DLK ++ + +FG + +R+ +
Sbjct: 204 VDATHSAVFHQIELLAI---DE----GLTFT-----DLKGTIKVFLQAMFGDLPIRFRAS 251
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNV--AWAFGLGLERLAMVLF 306
YFPFT PS E+++ + WLEV+GCG+ + ++K G + +A G G+ER AMVL
Sbjct: 252 YFPFTEPSAEVDLQWNGRWLEVMGCGMVDPNVMKSVGYNPEIYTGFAAGFGVERFAMVLH 311
Query: 307 DIPDIRLFWSSDERFTSQF 325
I DIR ++SD RF QF
Sbjct: 312 QIDDIRRLYASDLRFLRQF 330
>sp|Q8DL09|SYFA_THEEB Phenylalanine--tRNA ligase alpha subunit OS=Thermosynechococcus
elongatus (strain BP-1) GN=pheS PE=3 SV=1
Length = 336
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 115/199 (57%), Gaps = 17/199 (8%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQ---AELLKEHNHFLVTGDVYRRDS 188
NF+ + PADH +R DT+Y+ +LR HTS+ Q EL + + G YRRD+
Sbjct: 150 NFEALNTPADHPARDMQDTFYLPDGNLLRTHTSSVQIRYMELYEPPIRIVAPGRCYRRDT 209
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDT 248
D+TH VFHQ+E +++ DE GL T DLK + LFG V +R+ +
Sbjct: 210 EDATHAAVFHQIEILAV---DE----GLTFT-----DLKGTVTTFLAELFGDVPIRFRAS 257
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNV--AWAFGLGLERLAMVLF 306
YFPFT PS E+++ ++ WLEV+GCG+ + +LK G V +A G G+ER AMVL
Sbjct: 258 YFPFTEPSAEVDVQWQGRWLEVMGCGMVDPAVLKNVGYDPEVYTGFAAGFGVERFAMVLH 317
Query: 307 DIPDIRLFWSSDERFTSQF 325
I DIR F++SD RF QF
Sbjct: 318 QIDDIRRFYTSDLRFLRQF 336
>sp|Q3MB99|SYFA_ANAVT Phenylalanine--tRNA ligase alpha subunit OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=pheS PE=3 SV=1
Length = 330
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 117/199 (58%), Gaps = 17/199 (8%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + P DH +R DT+Y+ +LR HTS+ Q +++ H + G VYRRD+
Sbjct: 144 NFEALNTPPDHPARDMQDTFYLPDGNLLRTHTSSVQIRYMEKEEPPIHIVAPGRVYRRDN 203
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDT 248
+D+TH VFHQ+E ++I DE GL T DLK ++ + +FG + +R+ +
Sbjct: 204 VDATHSAVFHQIELLAI---DE----GLTFT-----DLKGTIKVFLQAMFGDLPIRFRAS 251
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNV--AWAFGLGLERLAMVLF 306
YFPFT PS E+++ + WLEV+GCG+ + ++K G + +A G G+ER AMVL
Sbjct: 252 YFPFTEPSAEVDLQWNGRWLEVMGCGMVDPNVMKSVGYDPEIYTGFAAGFGVERFAMVLH 311
Query: 307 DIPDIRLFWSSDERFTSQF 325
I DIR ++SD RF QF
Sbjct: 312 QIDDIRRLYASDLRFLRQF 330
>sp|Q55187|SYFA_SYNY3 Phenylalanine--tRNA ligase alpha subunit OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=pheS PE=3 SV=1
Length = 331
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 118/200 (59%), Gaps = 18/200 (9%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + +PADH +R DT+++ +LR HTS Q +++H+ + G VYRRD+
Sbjct: 144 NFEALNIPADHPARDMQDTFFLKDGRLLRTHTSPVQIRYMEKHDPPIRIVAPGRVYRRDT 203
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFG-AVEMRWVD 247
+D+TH VFHQ+E ++I GL T LK ++ + +FG A+ +R+
Sbjct: 204 VDATHSAVFHQVELLAI-------DKGLAFTH-----LKGTIQAFIKQMFGEALPIRFRA 251
Query: 248 TYFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNV--AWAFGLGLERLAMVL 305
+YFPFT PS E+++ ++ WLEV+GCG+ + +++ G V +A G G+ER AMVL
Sbjct: 252 SYFPFTEPSAEVDVQWQGKWLEVMGCGMVDPNVMEAVGYDPEVYTGFAAGFGVERFAMVL 311
Query: 306 FDIPDIRLFWSSDERFTSQF 325
I DIR ++SD RF QF
Sbjct: 312 HQIDDIRRLYNSDLRFLRQF 331
>sp|B2IUA1|SYFA_NOSP7 Phenylalanine--tRNA ligase alpha subunit OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=pheS PE=3 SV=1
Length = 330
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 115/199 (57%), Gaps = 17/199 (8%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + P DH +R DT+Y+ +LR HTS+ Q ++ + G VYRRD+
Sbjct: 144 NFEALNTPPDHPARDMQDTFYLPDGNLLRTHTSSVQIRYMEREEPPIRVVAPGRVYRRDN 203
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDT 248
+D+TH VFHQ+E ++I DE GL T DLK ++ + +FG + +R+ +
Sbjct: 204 VDATHSAVFHQIELLAI---DE----GLTFT-----DLKGTIKVFLQAIFGDLPIRFRAS 251
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNV--AWAFGLGLERLAMVLF 306
YFPFT PS E+++ + WLEV+GCG+ + +LK G V +A G G+ER AMVL
Sbjct: 252 YFPFTEPSAEVDLQWNGRWLEVMGCGMVDPNVLKSVGYDPEVYTGFAAGFGVERFAMVLH 311
Query: 307 DIPDIRLFWSSDERFTSQF 325
I DIR ++SD RF QF
Sbjct: 312 QIDDIRRLYASDLRFLQQF 330
>sp|B9KD77|SYFA_CAMLR Phenylalanine--tRNA ligase alpha subunit OS=Campylobacter lari
(strain RM2100 / D67 / ATCC BAA-1060) GN=pheS PE=3 SV=1
Length = 330
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 130/246 (52%), Gaps = 32/246 (13%)
Query: 96 HPIGILKNAIYEYFDSNYPNKFNKFDDLCPIVSVK-QNFDDVLVPADHVSRSYNDTYYVD 154
HPI + I EYF + N + P++ NF+ + +P +H +R DT+Y +
Sbjct: 100 HPIMQTMDKIIEYFTA-----LNFSIEKGPLIEDDFHNFEALNLPQNHPARDMQDTFYFE 154
Query: 155 SQTVLRCHTSAHQAELL---KEHNHFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFYPDEW 211
+T+LR TS Q + K + G V+RRD D TH P+FHQ+EG+ + E
Sbjct: 155 DKTLLRSQTSPVQIRTMLSQKPPIRMIAPGAVFRRD-FDITHTPMFHQVEGLVV----EE 209
Query: 212 GAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDTYFPFTNPSYELEI---FFK---- 264
G D +A +LK LE +++FG V++R+ ++FPFT PS E++I F K
Sbjct: 210 G----DKINFA--NLKDMLENFLKYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGCGC 263
Query: 265 -----ENWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDIPDIRLFWSSDE 319
WLEVLGCGV + + K G N +AFGLG+ER AM+L IPD+R + D
Sbjct: 264 RVCKHTGWLEVLGCGVVDPNVYKFVGYKNVSGYAFGLGVERFAMLLHKIPDLRSMFEGDL 323
Query: 320 RFTSQF 325
R QF
Sbjct: 324 RLLEQF 329
>sp|Q7TV42|SYFA_PROMM Phenylalanine--tRNA ligase alpha subunit OS=Prochlorococcus marinus
(strain MIT 9313) GN=pheS PE=3 SV=1
Length = 335
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 116/200 (58%), Gaps = 19/200 (9%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF + +P DH +R DT+Y+ +LR HTS Q L+E+ + G VYRRD+
Sbjct: 149 NFSALNIPEDHPARDMQDTFYLGGNLLLRTHTSPVQIRYLEENPPPVRIVAPGRVYRRDA 208
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDT 248
+D+TH PVFHQ+E ++I DE GLD + L+ + + FG + +R+ +
Sbjct: 209 VDATHSPVFHQVEVLAI---DE----GLDFSH-----LRGTVMAFLKAFFGDMPVRFRAS 256
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNVAW---AFGLGLERLAMVL 305
YFPFT PS E+++ ++ WLEV+GCG+ + +L+ G L+ W A GLG+ER MV
Sbjct: 257 YFPFTEPSAEVDVQWRGRWLEVMGCGMVDPAVLEGLG-LDPERWSGFAAGLGVERFCMVR 315
Query: 306 FDIPDIRLFWSSDERFTSQF 325
I DIR ++SD RF QF
Sbjct: 316 HGIDDIRRLYTSDLRFLEQF 335
>sp|Q319M1|SYFA_PROM9 Phenylalanine--tRNA ligase alpha subunit OS=Prochlorococcus marinus
(strain MIT 9312) GN=pheS PE=3 SV=1
Length = 345
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 116/200 (58%), Gaps = 19/200 (9%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + +P +H +R DT+Y+D +LR HTS Q L+++ + G VYRRD+
Sbjct: 159 NFESLNIPKNHPARDMQDTFYLDENRLLRTHTSPVQIRYLEKNPPPVRIIAPGRVYRRDA 218
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDT 248
+D+TH PVF+Q+E + I + L+ + + FG + +R+ +
Sbjct: 219 VDATHSPVFNQVEVLCI------------DQDINFSHLRGTVLTFLKTFFGDIPVRFRAS 266
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNVAW---AFGLGLERLAMVL 305
YFPFT PS E+++ +K WLEV+GCG+ + ++L++ G +++ W A GLG+ER MV
Sbjct: 267 YFPFTEPSAEVDVQWKGKWLEVMGCGMVDPKVLEKLG-IDSEKWTGFAAGLGVERFCMVR 325
Query: 306 FDIPDIRLFWSSDERFTSQF 325
I DIR F+++D RF QF
Sbjct: 326 HQIDDIRKFYTNDLRFLEQF 345
>sp|Q9CEB4|SYFA_LACLA Phenylalanine--tRNA ligase alpha subunit OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=pheS PE=3 SV=1
Length = 346
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 33/217 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+Y+ ++ +LR HTS QA + H+ + G VYR
Sbjct: 142 NFERMNLPKDHPARDMQDTFYITNEVLLRTHTSPMQARTMDAHDFSKGGLRMIAPGRVYR 201
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGA-VEMR 244
RD+ D+TH FHQ+EG+ + DLK L+ + + +FG E+R
Sbjct: 202 RDTDDATHSHQFHQIEGLVV------------DKNITMADLKGTLDLVMKKMFGQDRELR 249
Query: 245 WVDTYFPFTNPSYELEI-FFK-----------ENWLEVLGCGVTEQEILKRSGKLNNV-- 290
W +YFPFT PS E++I FK W+E+LG G+ +L+ SG ++V
Sbjct: 250 WRPSYFPFTEPSVEVDISCFKCGGKGCNVCKHTGWIEILGAGMVHPNVLEMSGLDSSVYS 309
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFSQ 327
+AFGLG ER+AM+ + I DIR F+ D RF QF +
Sbjct: 310 GFAFGLGQERIAMLRYGINDIRGFYQGDVRFLEQFGK 346
>sp|Q8XJ75|SYFA_CLOPE Phenylalanine--tRNA ligase alpha subunit OS=Clostridium perfringens
(strain 13 / Type A) GN=pheS PE=3 SV=1
Length = 341
Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 30/212 (14%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + +P +H +RS DT+Y++ VLR TS QA ++++ + G V+R D+
Sbjct: 142 NFEALNIPKNHPARSEQDTFYINDNVVLRTQTSPVQARVMEKQQPPIKMISPGKVFRSDA 201
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFG-AVEMRWVD 247
+D+TH P+F+QMEG+ I + DLK LE A+ +FG V+ ++
Sbjct: 202 VDATHSPIFYQMEGLVI------------DKDITFADLKGTLELFAKKMFGDKVKTKFRP 249
Query: 248 TYFPFTNPSYELE------------IFFKENWLEVLGCGVTEQEILKRSGKLNNV--AWA 293
+FPFT PS E++ + E W+E+LGCG+ ++L+ G V +A
Sbjct: 250 HHFPFTEPSAEMDATCFVCNGKGCKVCKGEGWIEILGCGMVHPQVLRNCGIDPEVYSGFA 309
Query: 294 FGLGLERLAMVLFDIPDIRLFWSSDERFTSQF 325
FG G++R+ M+ + I DIRL + SD RF +QF
Sbjct: 310 FGFGVDRMVMLKYGIDDIRLLYESDMRFLNQF 341
>sp|B9MRS9|SYFA_CALBD Phenylalanine--tRNA ligase alpha subunit OS=Caldicellulosiruptor
bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)
GN=pheS PE=3 SV=1
Length = 340
Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 118/212 (55%), Gaps = 30/212 (14%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + +PADH +R DT+Y+ +LR HTS Q ++K + G VYR D
Sbjct: 140 NFEALNIPADHPARDTQDTFYISEDVLLRTHTSPVQIRVMKSKKPPIKIISPGRVYRSDE 199
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFG-AVEMRWVD 247
+DSTH P+FHQ+EG+ + + G DLK LE A+ FG ++R+
Sbjct: 200 VDSTHSPIFHQIEGLFV----DKGVT--------MADLKGTLEVFAKRFFGEQTKVRFRP 247
Query: 248 TYFPFTNPSYELEI--FF----------KENWLEVLGCGVTEQEILKRSGKLNNV--AWA 293
+FPFT PS E++I F E W+E+LG G+ +++L G ++ +A
Sbjct: 248 HHFPFTEPSAEVDISCIFCGGKGCRTCKGEGWIEILGAGMVHRKVLLNCGIDPDIYTGFA 307
Query: 294 FGLGLERLAMVLFDIPDIRLFWSSDERFTSQF 325
FG+G+ER+A++ ++I DIRLF+ +D RF QF
Sbjct: 308 FGMGVERIALLRYEIEDIRLFYENDLRFLKQF 339
>sp|Q0TP72|SYFA_CLOP1 Phenylalanine--tRNA ligase alpha subunit OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=pheS PE=3
SV=1
Length = 339
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 30/212 (14%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + +P +H +RS DT+Y++ VLR TS QA ++++ + G V+R D+
Sbjct: 140 NFEALNIPKNHPARSEQDTFYINDNVVLRTQTSPVQARVMEKQQPPIKMISPGKVFRSDA 199
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFG-AVEMRWVD 247
+D+TH P+F+QMEG+ I + DLK LE A+ +FG V+ ++
Sbjct: 200 VDATHSPIFYQMEGLVI------------DKDITFADLKGTLELFAKKMFGDKVKTKFRP 247
Query: 248 TYFPFTNPSYELE------------IFFKENWLEVLGCGVTEQEILKRSGKLNNV--AWA 293
+FPFT PS E++ + E W+E+LGCG+ ++L+ G V +A
Sbjct: 248 HHFPFTEPSAEMDATCFVCNGKGCKVCKGEGWIEILGCGMVHPQVLRNCGIDPEVYSGFA 307
Query: 294 FGLGLERLAMVLFDIPDIRLFWSSDERFTSQF 325
FG G++R+ M+ + I DIRL + SD RF +QF
Sbjct: 308 FGFGVDRMVMLKYGIDDIRLLYESDMRFLNQF 339
>sp|A7H3F0|SYFA_CAMJD Phenylalanine--tRNA ligase alpha subunit OS=Campylobacter jejuni
subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)
GN=pheS PE=3 SV=1
Length = 330
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 126/246 (51%), Gaps = 32/246 (13%)
Query: 96 HPIGILKNAIYEYFDSNYPNKFNKFDDLCPIVSVK-QNFDDVLVPADHVSRSYNDTYYVD 154
HP+ + I EYF + N + P++ NF+ + +P H +R DT+Y D
Sbjct: 100 HPVMSTMDKIIEYFIA-----LNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFD 154
Query: 155 SQTVLRCHTSAHQAELL---KEHNHFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFYPDEW 211
+ +LR TS Q + K + G V+RRD D TH P+FHQ+EG+ +
Sbjct: 155 DKRLLRTQTSPVQIRTMLAQKPPIRMIAPGAVFRRD-FDITHTPMFHQVEGLVV------ 207
Query: 212 GAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDTYFPFTNPSYELEI---FFKE--- 265
+ + + +LK LE R++FG V++R+ ++FPFT PS E++I F KE
Sbjct: 208 ----EEGQKVSFANLKSALEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKEKGC 263
Query: 266 ------NWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDIPDIRLFWSSDE 319
WLEVLGCG+ + + G N +AFGLG+ER AM+L IPD+R + D
Sbjct: 264 RVCKHTGWLEVLGCGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDL 323
Query: 320 RFTSQF 325
R QF
Sbjct: 324 RLLEQF 329
>sp|Q7V0I7|SYFA_PROMP Phenylalanine--tRNA ligase alpha subunit OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=pheS PE=3
SV=1
Length = 335
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 19/200 (9%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + +P +H +R DT+Y+D +LR HTS Q L+ + + G VYRRD+
Sbjct: 149 NFESLNIPKNHPARDMQDTFYLDENRLLRTHTSPVQIRYLENNPPPVRIIAPGRVYRRDA 208
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDT 248
+D+TH PVF+Q+E + I + L+ + + FG + +R+ +
Sbjct: 209 VDATHSPVFNQVEVLCI------------DQDINFSHLRGTVLTFLKTFFGDIPVRFRAS 256
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNVAW---AFGLGLERLAMVL 305
YFPFT PS E+++ +K WLEV+GCG+ + ++L++ G +++ W A GLG+ER MV
Sbjct: 257 YFPFTEPSAEVDVQWKGKWLEVMGCGMVDPKVLEKLG-IDSEKWTGFAAGLGVERFCMVR 315
Query: 306 FDIPDIRLFWSSDERFTSQF 325
I DIR F+++D RF QF
Sbjct: 316 HQIDDIRRFYTNDLRFLKQF 335
>sp|Q0SRU1|SYFA_CLOPS Phenylalanine--tRNA ligase alpha subunit OS=Clostridium perfringens
(strain SM101 / Type A) GN=pheS PE=3 SV=1
Length = 339
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 30/212 (14%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + +P +H +RS DT+Y++ VLR TS QA ++++ + G V+R D+
Sbjct: 140 NFEALNIPKNHPARSEQDTFYINDNIVLRTQTSPVQARVMEKQQPPIKMISPGKVFRSDA 199
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFG-AVEMRWVD 247
+D+TH P+F+QMEG+ I + DLK LE A+ +FG V+ ++
Sbjct: 200 VDATHSPIFYQMEGLVI------------DKDITFADLKGTLELFAKKMFGDKVKTKFRP 247
Query: 248 TYFPFTNPSYELE------------IFFKENWLEVLGCGVTEQEILKRSGKLNNV--AWA 293
+FPFT PS E++ + E W+E+LGCG+ ++L+ G V +A
Sbjct: 248 HHFPFTEPSAEMDATCFVCNGKGCKVCKGEGWIEILGCGMVHPQVLRNCGIDPEVYSGFA 307
Query: 294 FGLGLERLAMVLFDIPDIRLFWSSDERFTSQF 325
FG G++R+ M+ + I DIRL + SD RF +QF
Sbjct: 308 FGFGVDRMVMLKYGIDDIRLLYESDMRFLNQF 339
>sp|Q02WL3|SYFA_LACLS Phenylalanine--tRNA ligase alpha subunit OS=Lactococcus lactis
subsp. cremoris (strain SK11) GN=pheS PE=3 SV=1
Length = 345
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 116/215 (53%), Gaps = 33/215 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+Y+ ++ +LR HTS QA + H+ + G VYR
Sbjct: 142 NFERMNLPKDHPARDMQDTFYITNEVLLRTHTSPMQARTMDAHDFSKGGLRMIAPGRVYR 201
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAV-EMR 244
RD+ D+TH FHQ+EG+ + DLK L+ + + +FG E+R
Sbjct: 202 RDTDDATHSHQFHQIEGLVV------------DKNITMADLKGTLDLVMKKMFGQERELR 249
Query: 245 WVDTYFPFTNPSYELEI-FFK-----------ENWLEVLGCGVTEQEILKRSGKLNNV-- 290
W +YFPFT PS E++I FK W+E+LG G+ +L+ SG ++V
Sbjct: 250 WRPSYFPFTEPSVEVDISCFKCGGKGCNVCKHTGWIEILGAGMVHPNVLEMSGLDSSVYS 309
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQF 325
+AFGLG ER+AM+ + I DIR F+ D RF QF
Sbjct: 310 GFAFGLGQERIAMLRYGINDIRGFYQGDVRFLEQF 344
>sp|A2RN75|SYFA_LACLM Phenylalanine--tRNA ligase alpha subunit OS=Lactococcus lactis
subsp. cremoris (strain MG1363) GN=pheS PE=3 SV=1
Length = 345
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 116/215 (53%), Gaps = 33/215 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+Y+ ++ +LR HTS QA + H+ + G VYR
Sbjct: 142 NFERMNLPKDHPARDMQDTFYITNEVLLRTHTSPMQARTMDAHDFSKGGLRMIAPGRVYR 201
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAV-EMR 244
RD+ D+TH FHQ+EG+ + DLK L+ + + +FG E+R
Sbjct: 202 RDTDDATHSHQFHQIEGLVV------------DKNITMADLKGTLDLVMKKMFGQERELR 249
Query: 245 WVDTYFPFTNPSYELEI-FFK-----------ENWLEVLGCGVTEQEILKRSGKLNNV-- 290
W +YFPFT PS E++I FK W+E+LG G+ +L+ SG ++V
Sbjct: 250 WRPSYFPFTEPSVEVDISCFKCGGKGCNVCKHTGWIEILGAGMVHPNVLEMSGLDSSVYS 309
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQF 325
+AFGLG ER+AM+ + I DIR F+ D RF QF
Sbjct: 310 GFAFGLGQERIAMLRYGINDIRGFYQGDVRFLEQF 344
>sp|Q7M8Y9|SYFA_WOLSU Phenylalanine--tRNA ligase alpha subunit OS=Wolinella succinogenes
(strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 /
FDC 602W) GN=pheS PE=3 SV=1
Length = 330
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 127/250 (50%), Gaps = 36/250 (14%)
Query: 94 NQHPIGILKNAIYEYFDS-NYPNKFNKF--DDLCPIVSVKQNFDDVLVPADHVSRSYNDT 150
+ HP+ I I +YF S N+ K DD NF+ + +P H +R DT
Sbjct: 98 SAHPVMITMERIVDYFVSLNFAIKSGPLIEDDF-------HNFEALNLPKYHPARDMQDT 150
Query: 151 YYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFY 207
+Y +LR HTS Q +++ + G V+RRD D TH P+FHQ+EG+ +
Sbjct: 151 FYFKDGMLLRTHTSPVQIRTMEKETPPIRMICPGAVFRRD-YDLTHTPMFHQVEGLVV-- 207
Query: 208 PDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDTYFPFTNPSYELEI--FF-- 263
+E G +LK LE R +FG V++R+ ++FPFT PS E++I F
Sbjct: 208 -EEEGKVSF-------ANLKYILEDFLRFMFGEVQVRFRTSFFPFTEPSAEVDISCIFCH 259
Query: 264 --------KENWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDIPDIRLFW 315
WLEVLGCG+ ++ + K G N +AFGLG+ER AM++ + D+R F+
Sbjct: 260 GEGCRVCSHTGWLEVLGCGLVDENVFKAVGYKNVSGYAFGLGVERFAMLIHAVSDLRAFF 319
Query: 316 SSDERFTSQF 325
SD R QF
Sbjct: 320 ESDLRVLEQF 329
>sp|Q7TTU6|SYFA_SYNPX Phenylalanine--tRNA ligase alpha subunit OS=Synechococcus sp.
(strain WH8102) GN=pheS PE=3 SV=1
Length = 335
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 114/199 (57%), Gaps = 17/199 (8%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF + +P DH +R DT+Y+ +LR HTS Q L+++ + G VYRRD+
Sbjct: 149 NFTALNIPEDHPARDMQDTFYLQGDLLLRTHTSPVQIRHLEQNPPPVRIVAPGRVYRRDA 208
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDT 248
+D+TH PVFHQ+E ++I DE GLD + L+ + + FG + +R+ +
Sbjct: 209 VDATHSPVFHQVEVLAI---DE----GLDFSH-----LRGTVMAFLKAFFGDLPVRFRAS 256
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSG--KLNNVAWAFGLGLERLAMVLF 306
YFPFT PS E+++ ++ WLEV+GCG+ + +L+ G +A GLG+ER MV
Sbjct: 257 YFPFTEPSAEVDVQWRGRWLEVMGCGMVDPAVLEGLGLDPERYSGFAAGLGVERFCMVRH 316
Query: 307 DIPDIRLFWSSDERFTSQF 325
I DIR ++SD RF QF
Sbjct: 317 GIDDIRRLYTSDLRFLEQF 335
>sp|Q1WTY9|SYFA_LACS1 Phenylalanine--tRNA ligase alpha subunit OS=Lactobacillus
salivarius (strain UCC118) GN=pheS PE=3 SV=1
Length = 348
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 120/217 (55%), Gaps = 33/217 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+Y+ + ++R TS QA +++H+ + G VYR
Sbjct: 142 NFEMLNLPQDHPARDMQDTFYITEKILMRTQTSPVQARTMEKHDFSKGPLKMISPGKVYR 201
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGA-VEMR 244
RD+ D+TH FHQ+EG+ I DLK L+ +AR +FG E+R
Sbjct: 202 RDTDDATHSHQFHQVEGLVI------------DKHITMADLKGTLQLIARTIFGEDREIR 249
Query: 245 WVDTYFPFTNPSYELEI-FFKEN-----------WLEVLGCGVTEQEILKRSGKLNNV-- 290
+YFPFT PS E+++ FK N W+EVLG G+ +L+ +G +NV
Sbjct: 250 MRPSYFPFTEPSAEIDVSCFKCNGKGCSVCKYTGWIEVLGAGMVHPNVLEMAGVDSNVYG 309
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFSQ 327
+AFGLG +R AM+ + + DIR F+ +D RF SQFSQ
Sbjct: 310 GFAFGLGPDRFAMLKYGVDDIREFYLNDVRFLSQFSQ 346
>sp|Q8CWX1|SYFA_STRMU Phenylalanine--tRNA ligase alpha subunit OS=Streptococcus mutans
serotype c (strain ATCC 700610 / UA159) GN=pheS PE=3
SV=1
Length = 347
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 45/265 (16%)
Query: 87 GMQLHKRNQHPIGILKNAIYEYFDSNYPNKFNKFDDLCPIVSVKQ---NFDDVLVPADHV 143
G Q+H N+H + + I + F F D V+Q NF+ + +P DH
Sbjct: 103 GRQIHLGNRHVLSQISEEIEDIF---LGMGFQVVDGY----EVEQDYYNFERMNLPKDHP 155
Query: 144 SRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYRRDSIDSTHYPVF 197
+R DT+Y+ +LR HTS QA L +H+ + G V+RRD+ D+TH F
Sbjct: 156 ARDMQDTFYISEDILLRTHTSPVQARTLDKHDFSKGPLKMISPGRVFRRDTDDATHSHQF 215
Query: 198 HQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGA-VEMRWVDTYFPFTNPS 256
HQ+EG+ + + DLK LE +++ +FG ++R +YFPFT PS
Sbjct: 216 HQIEGLVV------------GKNISMGDLKGTLEMISKKMFGEDRKIRLRPSYFPFTEPS 263
Query: 257 YELEIFF------------KENWLEVLGCGVTEQEILKRSGKLNN---VAWAFGLGLERL 301
E+++ K W+E+LG G+ +L+ SG +N+ +AFGLG ER+
Sbjct: 264 VEVDVSCFKCGGKGCNVCKKTGWIEILGAGMVHPSVLEMSG-VNSEEYSGFAFGLGQERM 322
Query: 302 AMVLFDIPDIRLFWSSDERFTSQFS 326
AM+ + I DIR F+ D RFT QF+
Sbjct: 323 AMLRYGINDIRGFYQGDSRFTEQFN 347
>sp|Q7VAV9|SYFA_PROMA Phenylalanine--tRNA ligase alpha subunit OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=pheS PE=3 SV=1
Length = 335
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 115/200 (57%), Gaps = 19/200 (9%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF + +P DH +R DT+Y+ + +LR HTS Q L+ + G VYRRD+
Sbjct: 149 NFAALNIPEDHPARDMQDTFYLSNNLLLRTHTSPVQIRCLENSAPPVRIVAPGRVYRRDA 208
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDT 248
+D+TH PVFHQ+E ++I DE GLD + L+ + + FG + +R+ +
Sbjct: 209 VDATHSPVFHQVEVLAI---DE----GLDFSH-----LRGTVMAFLKAFFGDLPVRFRAS 256
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSGKLNNVAW---AFGLGLERLAMVL 305
YFPFT PS E+++ ++ WLEV+GCG+ + +L+ G ++ W A GLG+ER MV
Sbjct: 257 YFPFTEPSAEVDVQWRGKWLEVMGCGMVDPSVLEGLG-IDPERWSGFAAGLGVERFCMVR 315
Query: 306 FDIPDIRLFWSSDERFTSQF 325
I DIR ++SD RF QF
Sbjct: 316 HGIDDIRRLYTSDLRFLEQF 335
>sp|B2G885|SYFA_LACRJ Phenylalanine--tRNA ligase alpha subunit OS=Lactobacillus reuteri
(strain JCM 1112) GN=pheS PE=3 SV=1
Length = 348
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 115/217 (52%), Gaps = 33/217 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+YV ++R TS QA +L++H+ + G VYR
Sbjct: 142 NFEKLNLPKDHPARDMQDTFYVTPSVLMRTQTSPMQARMLEKHDFSQGPLKMISPGKVYR 201
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFG-AVEMR 244
RD+ D+TH FHQ+EG+ + DLK LE +A++LFG +++R
Sbjct: 202 RDTDDATHSHQFHQIEGMVV------------GKNITMADLKGTLEAVAQNLFGDKLKVR 249
Query: 245 WVDTYFPFTNPSYELEIFF------------KENWLEVLGCGVTEQEILKRSG--KLNNV 290
+YFPFT PS E +I + W+EVLG G+ +LK SG
Sbjct: 250 LRPSYFPFTEPSVEADITCFNCLGKGCAICKQTGWIEVLGAGMVHPNVLKMSGVDPEEYG 309
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFSQ 327
+AFGLG +R AM+ + + DIR F+ +D RF +QF Q
Sbjct: 310 GFAFGLGPDRFAMLKYGVDDIRNFYQNDVRFLNQFDQ 346
>sp|A5VKV1|SYFA_LACRD Phenylalanine--tRNA ligase alpha subunit OS=Lactobacillus reuteri
(strain DSM 20016) GN=pheS PE=3 SV=1
Length = 348
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 115/217 (52%), Gaps = 33/217 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+YV ++R TS QA +L++H+ + G VYR
Sbjct: 142 NFEKLNLPKDHPARDMQDTFYVTPSVLMRTQTSPMQARMLEKHDFSQGPLKMISPGKVYR 201
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFG-AVEMR 244
RD+ D+TH FHQ+EG+ + DLK LE +A++LFG +++R
Sbjct: 202 RDTDDATHSHQFHQIEGMVV------------GKNITMADLKGTLEAVAQNLFGDKLKVR 249
Query: 245 WVDTYFPFTNPSYELEIFF------------KENWLEVLGCGVTEQEILKRSG--KLNNV 290
+YFPFT PS E +I + W+EVLG G+ +LK SG
Sbjct: 250 LRPSYFPFTEPSVEADITCFNCLGKGCAICKQTGWIEVLGAGMVHPNVLKMSGVDPEEYG 309
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFSQ 327
+AFGLG +R AM+ + + DIR F+ +D RF +QF Q
Sbjct: 310 GFAFGLGPDRFAMLKYGVDDIRNFYQNDVRFLNQFDQ 346
>sp|Q38VV3|SYFA_LACSS Phenylalanine--tRNA ligase alpha subunit OS=Lactobacillus sakei
subsp. sakei (strain 23K) GN=pheS PE=3 SV=1
Length = 348
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 119/219 (54%), Gaps = 33/219 (15%)
Query: 130 KQNFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDV 183
K NF+ + +PADH +R DT+Y+ T++R H S ++A L+ H+ + G V
Sbjct: 140 KHNFEMLNMPADHPARDMQDTFYITKDTLMRTHMSPNEARDLESHDFANGPIKMISPGRV 199
Query: 184 YRRDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGA-VE 242
YRRD+ D+TH F+QMEG I DLK LE H+FG +
Sbjct: 200 YRRDTDDATHSHQFYQMEGQVI------------DKNITMADLKGTLEYTIHHIFGEDRD 247
Query: 243 MRWVDTYFPFTNPSYELEI-FFKEN-----------WLEVLGCGVTEQEILKRSGKLNNV 290
+R+ +YFPFT PS E++I F+ N W+EVLG G+T +LK G V
Sbjct: 248 LRFRPSYFPFTEPSVEVDISCFRCNGEGCSVCKQTGWIEVLGAGMTHPNVLKAGGVDPEV 307
Query: 291 --AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFSQ 327
+AFGLG++R AM+ + + DIR F+ +D RF +QF+Q
Sbjct: 308 YGGFAFGLGIDRFAMLKYGVDDIRNFYLNDVRFLNQFTQ 346
>sp|Q5M3S5|SYFA_STRT2 Phenylalanine--tRNA ligase alpha subunit OS=Streptococcus
thermophilus (strain ATCC BAA-250 / LMG 18311) GN=pheS
PE=3 SV=2
Length = 347
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 116/215 (53%), Gaps = 33/215 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+Y+ + +LR HTS QA L +H+ + G V+R
Sbjct: 144 NFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQARTLDKHDFSKGPLKMISPGRVFR 203
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAV-EMR 244
RD+ D+TH FHQ+EG+ + + DLK LE + + +FGA ++R
Sbjct: 204 RDTDDATHSHQFHQIEGLVV------------GKNISMGDLKGTLEMIIQKMFGAERQIR 251
Query: 245 WVDTYFPFTNPSYELEIFF------------KENWLEVLGCGVTEQEILKRSGKLNN--V 290
+YFPFT PS E+++ K W+E+LG G+ ++L+ SG +
Sbjct: 252 LRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKKTGWIEILGAGMVHPQVLEMSGVDSEEYS 311
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQF 325
+AFGLG ER+AM+ + I DIR F+ D RF+ QF
Sbjct: 312 GFAFGLGQERIAMLRYGINDIRSFYQGDVRFSEQF 346
>sp|Q5LZ70|SYFA_STRT1 Phenylalanine--tRNA ligase alpha subunit OS=Streptococcus
thermophilus (strain CNRZ 1066) GN=pheS PE=3 SV=2
Length = 347
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 116/215 (53%), Gaps = 33/215 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+Y+ + +LR HTS QA L +H+ + G V+R
Sbjct: 144 NFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQARTLDKHDFSKGPLKMISPGRVFR 203
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAV-EMR 244
RD+ D+TH FHQ+EG+ + + DLK LE + + +FGA ++R
Sbjct: 204 RDTDDATHSHQFHQIEGLVV------------GKNISMGDLKGTLEMIIQKMFGAERQIR 251
Query: 245 WVDTYFPFTNPSYELEIFF------------KENWLEVLGCGVTEQEILKRSGKLNN--V 290
+YFPFT PS E+++ K W+E+LG G+ ++L+ SG +
Sbjct: 252 LRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKKTGWIEILGAGMVHPQVLEMSGVDSEEYS 311
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQF 325
+AFGLG ER+AM+ + I DIR F+ D RF+ QF
Sbjct: 312 GFAFGLGQERIAMLRYGINDIRSFYQGDVRFSEQF 346
>sp|A6Q7P7|SYFA_SULNB Phenylalanine--tRNA ligase alpha subunit OS=Sulfurovum sp. (strain
NBC37-1) GN=pheS PE=3 SV=1
Length = 330
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 126/255 (49%), Gaps = 32/255 (12%)
Query: 87 GMQLHKRNQHPIGILKNAIYEYFDSNYPNKFNKFDDLCPIVSVK-QNFDDVLVPADHVSR 145
G K HP+ + I +YF + N + P+V NF+ + +P H +R
Sbjct: 91 GAVAEKGALHPVMETMDKIIDYFVA-----LNFAVETGPMVEDDFHNFEALNLPKYHPAR 145
Query: 146 SYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDSIDSTHYPVFHQMEG 202
DT+Y +LR HTS Q + E + G V+RRD D TH P+FHQ+EG
Sbjct: 146 DMQDTFYFKDSGLLRTHTSPVQIRTMLETKPPIRMIAPGSVFRRD-YDLTHTPMFHQVEG 204
Query: 203 VSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDTYFPFTNPSYELEI- 261
+ + DE G +LK L +++FG VE+R+ ++FPFT PS E++I
Sbjct: 205 LVV---DEKGKVSF-------ANLKAILTDFLQYMFGDVEVRFRPSFFPFTEPSAEVDIS 254
Query: 262 -FFKEN----------WLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDIPD 310
F E WLEVLGCG+ + + K G + +AFGLG+ER AM++ IPD
Sbjct: 255 CIFCEGKGCRVCSHTGWLEVLGCGIVDPNVFKAVGYEDVSGYAFGLGVERFAMLMHKIPD 314
Query: 311 IRLFWSSDERFTSQF 325
+R + D R QF
Sbjct: 315 LRSLFEGDIRLLEQF 329
>sp|Q1G9C7|SYFA_LACDA Phenylalanine--tRNA ligase alpha subunit OS=Lactobacillus
delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM
20081) GN=pheS PE=3 SV=1
Length = 349
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 131/262 (50%), Gaps = 37/262 (14%)
Query: 87 GMQLHKRNQHPIGILKNAIYEYFDSNYPNKFNKFDDLCPIVSVKQNFDDVLVPADHVSRS 146
G + H ++HPI I+++ + +F + I S NF+ + +P DH +R
Sbjct: 101 GRRKHVGSKHPIRIIQDDLERFFIGMGYQVVQGPE----IESEHYNFEMLNLPKDHPARD 156
Query: 147 YNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYRRDSIDSTHYPVFHQM 200
T+YVD+ +LR TS QA +++H+ + G VYRRD D+TH F QM
Sbjct: 157 MQATFYVDADHLLRSQTSPVQARTMEKHDFDKGDLKMISPGKVYRRDDDDATHSHQFMQM 216
Query: 201 EGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGA-VEMRWVDTYFPFTNPSYEL 259
EG+ + + DLK LE +A+H FG E R +YFPFT PS E+
Sbjct: 217 EGLVV------------GKNISLSDLKGTLELVAKHEFGQDRETRLRPSYFPFTEPSVEM 264
Query: 260 EIFFKE------------NWLEVLGCGVTEQEILKRSGKLNNV--AWAFGLGLERLAMVL 305
++ E W+EVLG G+ +L +G +V +AFGLGL+R A++
Sbjct: 265 DVSCFECGGKGCAICKNTGWIEVLGAGIVHPNVLSAAGIDPSVYSGFAFGLGLDRFAILK 324
Query: 306 FDIPDIRLFWSSDERFTSQFSQ 327
+ I DIR F+S D RF QF Q
Sbjct: 325 YGIDDIRDFYSDDVRFLQQFRQ 346
>sp|Q5HUR1|SYFA_CAMJR Phenylalanine--tRNA ligase alpha subunit OS=Campylobacter jejuni
(strain RM1221) GN=pheS PE=3 SV=1
Length = 330
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 125/246 (50%), Gaps = 32/246 (13%)
Query: 96 HPIGILKNAIYEYFDSNYPNKFNKFDDLCPIVSVK-QNFDDVLVPADHVSRSYNDTYYVD 154
HP+ + I EYF + N + P++ NF+ + +P H +R DT+Y D
Sbjct: 100 HPVMSTMDKIIEYFIA-----LNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFD 154
Query: 155 SQTVLRCHTSAHQAELL---KEHNHFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFYPDEW 211
+ +LR TS Q + K + G V+RRD D TH P+FHQ+EG+ +
Sbjct: 155 DKRLLRTQTSPVQIRTMLAQKPPIRMIAPGAVFRRD-FDITHTPMFHQVEGLVV------ 207
Query: 212 GAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDTYFPFTNPSYELEI---FFK---- 264
+ + + +LK LE R++FG V++R+ ++FPFT PS E++I F K
Sbjct: 208 ----EEGQKVSFANLKSVLEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGC 263
Query: 265 -----ENWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDIPDIRLFWSSDE 319
WLEVLGCG+ + + G N +AFGLG+ER AM+L IPD+R + D
Sbjct: 264 RVCKHTGWLEVLGCGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDL 323
Query: 320 RFTSQF 325
R QF
Sbjct: 324 RLLEQF 329
>sp|A1VZN1|SYFA_CAMJJ Phenylalanine--tRNA ligase alpha subunit OS=Campylobacter jejuni
subsp. jejuni serotype O:23/36 (strain 81-176) GN=pheS
PE=3 SV=1
Length = 330
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 125/246 (50%), Gaps = 32/246 (13%)
Query: 96 HPIGILKNAIYEYFDSNYPNKFNKFDDLCPIVSVK-QNFDDVLVPADHVSRSYNDTYYVD 154
HP+ + I EYF + N + P++ NF+ + +P H +R DT+Y D
Sbjct: 100 HPVMSTMDKIIEYFIA-----LNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFD 154
Query: 155 SQTVLRCHTSAHQAELL---KEHNHFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFYPDEW 211
+ +LR TS Q + K + G V+RRD D TH P+FHQ+EG+ +
Sbjct: 155 DKRLLRTQTSPVQIRTMLAQKPPIRMIAPGAVFRRD-FDITHTPMFHQVEGLVV------ 207
Query: 212 GAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDTYFPFTNPSYELEI---FFK---- 264
+ + + +LK LE R++FG V++R+ ++FPFT PS E++I F K
Sbjct: 208 ----EEGQKVSFANLKSVLEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGC 263
Query: 265 -----ENWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDIPDIRLFWSSDE 319
WLEVLGCG+ + + G N +AFGLG+ER AM+L IPD+R + D
Sbjct: 264 RVCKHTGWLEVLGCGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDL 323
Query: 320 RFTSQF 325
R QF
Sbjct: 324 RLLEQF 329
>sp|Q9PP34|SYFA_CAMJE Phenylalanine--tRNA ligase alpha subunit OS=Campylobacter jejuni
subsp. jejuni serotype O:2 (strain NCTC 11168) GN=pheS
PE=3 SV=1
Length = 330
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 125/246 (50%), Gaps = 32/246 (13%)
Query: 96 HPIGILKNAIYEYFDSNYPNKFNKFDDLCPIVSVK-QNFDDVLVPADHVSRSYNDTYYVD 154
HP+ + I EYF + N + P++ NF+ + +P H +R DT+Y D
Sbjct: 100 HPVMSTMDKIIEYFIA-----LNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFD 154
Query: 155 SQTVLRCHTSAHQAELL---KEHNHFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFYPDEW 211
+ +LR TS Q + K + G V+RRD D TH P+FHQ+EG+ +
Sbjct: 155 DKRLLRTQTSPVQIRTMLAQKPPIRMIAPGAVFRRD-FDITHTPMFHQVEGLVV------ 207
Query: 212 GAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDTYFPFTNPSYELEI---FFK---- 264
+ + + +LK LE R++FG V++R+ ++FPFT PS E++I F K
Sbjct: 208 ----EEGQKVSFANLKSVLEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGC 263
Query: 265 -----ENWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDIPDIRLFWSSDE 319
WLEVLGCG+ + + G N +AFGLG+ER AM+L IPD+R + D
Sbjct: 264 RVCKHTGWLEVLGCGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDL 323
Query: 320 RFTSQF 325
R QF
Sbjct: 324 RLLEQF 329
>sp|A8FLU6|SYFA_CAMJ8 Phenylalanine--tRNA ligase alpha subunit OS=Campylobacter jejuni
subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)
GN=pheS PE=3 SV=1
Length = 330
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 125/246 (50%), Gaps = 32/246 (13%)
Query: 96 HPIGILKNAIYEYFDSNYPNKFNKFDDLCPIVSVK-QNFDDVLVPADHVSRSYNDTYYVD 154
HP+ + I EYF + N + P++ NF+ + +P H +R DT+Y D
Sbjct: 100 HPVMSTMDKIIEYFIA-----LNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFD 154
Query: 155 SQTVLRCHTSAHQAELL---KEHNHFLVTGDVYRRDSIDSTHYPVFHQMEGVSIFYPDEW 211
+ +LR TS Q + K + G V+RRD D TH P+FHQ+EG+ +
Sbjct: 155 DKRLLRTQTSPVQIRTMLAQKPPIRMIAPGAVFRRD-FDITHTPMFHQVEGLVV------ 207
Query: 212 GAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDTYFPFTNPSYELEI---FFK---- 264
+ + + +LK LE R++FG V++R+ ++FPFT PS E++I F K
Sbjct: 208 ----EEGQKVSFANLKSVLEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGC 263
Query: 265 -----ENWLEVLGCGVTEQEILKRSGKLNNVAWAFGLGLERLAMVLFDIPDIRLFWSSDE 319
WLEVLGCG+ + + G N +AFGLG+ER AM+L IPD+R + D
Sbjct: 264 RVCKHTGWLEVLGCGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDL 323
Query: 320 RFTSQF 325
R QF
Sbjct: 324 RLLEQF 329
>sp|Q6ANC1|SYFA_DESPS Phenylalanine--tRNA ligase alpha subunit OS=Desulfotalea
psychrophila (strain LSv54 / DSM 12343) GN=pheS PE=3
SV=1
Length = 338
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 31/212 (14%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + +PA H +R +DT+YV T+LR HTS QA ++++ + + G VYR DS
Sbjct: 140 NFEALNIPAHHPARDMHDTFYVSGSTLLRTHTSPMQARVMEKQDPPLRMIAPGKVYRCDS 199
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGA-VEMRWVD 247
D TH P+FHQ+EG+ L + DLK L + +F + +R+
Sbjct: 200 -DITHTPMFHQVEGL------------LVDKNISFADLKGVLTLFLQKIFKQDLPVRFRP 246
Query: 248 TYFPFTNPSYELEIFF------------KENWLEVLGCGVTEQEILKRSGKLNNV--AWA 293
++FPFT PS E++I K WLE+LG G+ + E+ K G V +A
Sbjct: 247 SFFPFTEPSAEVDIACVMCGGKGCRVCKKTGWLEILGAGMVDPEVFKMVGYDPEVYSGFA 306
Query: 294 FGLGLERLAMVLFDIPDIRLFWSSDERFTSQF 325
FGLG+ER+AM+ + I DIRLF+ +D+RF SQF
Sbjct: 307 FGLGIERIAMLKYRIDDIRLFYENDQRFLSQF 338
>sp|Q8P1K1|SYFA_STRP8 Phenylalanine--tRNA ligase alpha subunit OS=Streptococcus pyogenes
serotype M18 (strain MGAS8232) GN=pheS PE=3 SV=2
Length = 347
Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 115/216 (53%), Gaps = 33/216 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+Y+ + +LR HTS QA L +H+ + G V+R
Sbjct: 144 NFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQARTLDQHDFSKGPLKMVSPGRVFR 203
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVE-MR 244
RD+ D+TH FHQ+EG+ + + +DLK LE + + +FG +R
Sbjct: 204 RDTDDATHSHQFHQIEGLVV------------GKNISMRDLKGTLEMIIKKMFGEERSIR 251
Query: 245 WVDTYFPFTNPSYELEIFF------------KENWLEVLGCGVTEQEILKRSG--KLNNV 290
+YFPFT PS E+++ K W+E+LG G+ +L+ SG
Sbjct: 252 LRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKKTGWIEILGAGMVHPSVLEMSGVDAKEYS 311
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFS 326
+AFGLG ER+AM+ + I DIR F+ D+RF+ QF+
Sbjct: 312 GFAFGLGQERIAMLRYGINDIRGFYQGDQRFSEQFN 347
>sp|Q46JK1|SYFA_PROMT Phenylalanine--tRNA ligase alpha subunit OS=Prochlorococcus marinus
(strain NATL2A) GN=pheS PE=3 SV=1
Length = 335
Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 113/199 (56%), Gaps = 17/199 (8%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRRDS 188
NF+ + +P DH +R DT+Y+ + +LR HTS Q L+ + G VYRRD+
Sbjct: 149 NFEALNIPPDHPARDMQDTFYLGGEYLLRTHTSPVQIRCLESKKPPVRIVSPGRVYRRDA 208
Query: 189 IDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVEMRWVDT 248
+D+TH PVFHQ+E ++I DE LD + L+ + + FG + +R+ +
Sbjct: 209 VDATHSPVFHQVEVLAI---DEK----LDFSH-----LRGTVMAFLKAFFGDLPIRFRAS 256
Query: 249 YFPFTNPSYELEIFFKENWLEVLGCGVTEQEILKRSG--KLNNVAWAFGLGLERLAMVLF 306
YFPFT PS E+++ ++ WLEV+GCG+ + +L+ G +A GLG+ER MV
Sbjct: 257 YFPFTEPSAEVDVQWRGKWLEVMGCGMVDPAVLEELGIDPEKYSGFAAGLGVERFCMVRH 316
Query: 307 DIPDIRLFWSSDERFTSQF 325
+ DIR ++SD RF QF
Sbjct: 317 GLDDIRKLYTSDLRFLEQF 335
>sp|C0QT55|SYFA_PERMH Phenylalanine--tRNA ligase alpha subunit OS=Persephonella marina
(strain DSM 14350 / EX-H1) GN=pheS PE=3 SV=1
Length = 344
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 115/214 (53%), Gaps = 31/214 (14%)
Query: 130 KQNFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN---HFLVTGDVYRR 186
K NFD + +P DH +R DT+++++ +LR HTS Q + +H + G VYR+
Sbjct: 140 KYNFDMLNIPPDHPARDMQDTFFLNNGDILRTHTSPVQIRTMLKHKPPIAVIAPGRVYRK 199
Query: 187 DSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGA-VEMRW 245
D+ D TH P+FHQ+EG+ L + +DLK L+ +FG ++R+
Sbjct: 200 DA-DPTHSPMFHQIEGL------------LVDRDVTFRDLKGILKIFLESVFGKDTKIRF 246
Query: 246 VDTYFPFTNPSYELEIFFK------------ENWLEVLGCGVTEQEILKRSG--KLNNVA 291
+YFPFT PS E++I WLE+LGCG+ + E+ K G
Sbjct: 247 RPSYFPFTEPSAEVDIGCTVCGGKGCRVCKGTGWLEILGCGMVDPEVFKAVGIDPEEYTG 306
Query: 292 WAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQF 325
+AFGLG+ER+AM+ + I DIRL ++ D RF QF
Sbjct: 307 FAFGLGIERIAMLKYRITDIRLLFTGDMRFNQQF 340
>sp|B5XKQ6|SYFA_STRPZ Phenylalanine--tRNA ligase alpha subunit OS=Streptococcus pyogenes
serotype M49 (strain NZ131) GN=pheS PE=3 SV=1
Length = 347
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 33/216 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+Y+ + +LR HTS QA L +H+ + G V+R
Sbjct: 144 NFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQARTLDQHDFSKGPLKMVSPGRVFR 203
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVE-MR 244
RD+ D+TH FHQ+EG+ + + DLK LE + + +FG +R
Sbjct: 204 RDTDDATHSHQFHQIEGLVV------------GKNISMGDLKGTLEMIIKKMFGEERSIR 251
Query: 245 WVDTYFPFTNPSYELEIFF------------KENWLEVLGCGVTEQEILKRSG--KLNNV 290
+YFPFT PS E+++ K W+E+LG G+ +L+ SG
Sbjct: 252 LRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKKTGWIEILGAGMVHPSVLEMSGVDAKEYS 311
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFS 326
+AFGLG ER+AM+ + I DIR F+ D+RF+ QF+
Sbjct: 312 GFAFGLGQERIAMLRYGINDIRGFYQGDQRFSEQFN 347
>sp|P0DG51|SYFA_STRPQ Phenylalanine--tRNA ligase alpha subunit OS=Streptococcus pyogenes
serotype M3 (strain SSI-1) GN=pheS PE=3 SV=1
Length = 347
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 33/216 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+Y+ + +LR HTS QA L +H+ + G V+R
Sbjct: 144 NFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQARTLDQHDFSKGPLKMVSPGRVFR 203
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVE-MR 244
RD+ D+TH FHQ+EG+ + + DLK LE + + +FG +R
Sbjct: 204 RDTDDATHSHQFHQIEGLVV------------GKNISMGDLKGTLEMIIKKMFGEERSIR 251
Query: 245 WVDTYFPFTNPSYELEIFF------------KENWLEVLGCGVTEQEILKRSG--KLNNV 290
+YFPFT PS E+++ K W+E+LG G+ +L+ SG
Sbjct: 252 LRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKKTGWIEILGAGMVHPSVLEMSGVDAKEYS 311
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFS 326
+AFGLG ER+AM+ + I DIR F+ D+RF+ QF+
Sbjct: 312 GFAFGLGQERIAMLRYGINDIRGFYQGDQRFSEQFN 347
>sp|Q5XCX4|SYFA_STRP6 Phenylalanine--tRNA ligase alpha subunit OS=Streptococcus pyogenes
serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=pheS
PE=3 SV=2
Length = 347
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 33/216 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+Y+ + +LR HTS QA L +H+ + G V+R
Sbjct: 144 NFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQARTLDQHDFSKGPLKMVSPGRVFR 203
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVE-MR 244
RD+ D+TH FHQ+EG+ + + DLK LE + + +FG +R
Sbjct: 204 RDTDDATHSHQFHQIEGLVV------------GKNISMGDLKGTLEMIIKKMFGEERSIR 251
Query: 245 WVDTYFPFTNPSYELEIFF------------KENWLEVLGCGVTEQEILKRSG--KLNNV 290
+YFPFT PS E+++ K W+E+LG G+ +L+ SG
Sbjct: 252 LRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKKTGWIEILGAGMVHPSVLEMSGVDAKEYS 311
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFS 326
+AFGLG ER+AM+ + I DIR F+ D+RF+ QF+
Sbjct: 312 GFAFGLGQERIAMLRYGINDIRGFYQGDQRFSEQFN 347
>sp|P0DG50|SYFA_STRP3 Phenylalanine--tRNA ligase alpha subunit OS=Streptococcus pyogenes
serotype M3 (strain ATCC BAA-595 / MGAS315) GN=pheS PE=3
SV=1
Length = 347
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 33/216 (15%)
Query: 132 NFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLKEHN------HFLVTGDVYR 185
NF+ + +P DH +R DT+Y+ + +LR HTS QA L +H+ + G V+R
Sbjct: 144 NFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQARTLDQHDFSKGPLKMVSPGRVFR 203
Query: 186 RDSIDSTHYPVFHQMEGVSIFYPDEWGAAGLDATEYAAKDLKRCLEGLARHLFGAVE-MR 244
RD+ D+TH FHQ+EG+ + + DLK LE + + +FG +R
Sbjct: 204 RDTDDATHSHQFHQIEGLVV------------GKNISMGDLKGTLEMIIKKMFGEERSIR 251
Query: 245 WVDTYFPFTNPSYELEIFF------------KENWLEVLGCGVTEQEILKRSG--KLNNV 290
+YFPFT PS E+++ K W+E+LG G+ +L+ SG
Sbjct: 252 LRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKKTGWIEILGAGMVHPSVLEMSGVDAKEYS 311
Query: 291 AWAFGLGLERLAMVLFDIPDIRLFWSSDERFTSQFS 326
+AFGLG ER+AM+ + I DIR F+ D+RF+ QF+
Sbjct: 312 GFAFGLGQERIAMLRYGINDIRGFYQGDQRFSEQFN 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,906,499
Number of Sequences: 539616
Number of extensions: 7143269
Number of successful extensions: 20124
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 16762
Number of HSP's gapped (non-prelim): 915
length of query: 428
length of database: 191,569,459
effective HSP length: 120
effective length of query: 308
effective length of database: 126,815,539
effective search space: 39059186012
effective search space used: 39059186012
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)