Query 014219
Match_columns 428
No_of_seqs 156 out of 1413
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 07:37:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014219.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014219hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yuw_A Heat shock cognate 71 k 100.0 2.2E-67 7.7E-72 521.2 48.8 419 1-428 1-419 (554)
2 3d2f_A Heat shock protein homo 100.0 1.4E-66 4.9E-71 523.4 47.7 418 7-428 3-424 (675)
3 4b9q_A Chaperone protein DNAK; 100.0 4.8E-65 1.6E-69 509.1 49.6 406 7-428 3-417 (605)
4 2kho_A Heat shock protein 70; 100.0 3.2E-64 1.1E-68 503.1 40.8 406 7-428 3-417 (605)
5 3i33_A Heat shock-related 70 k 100.0 6.8E-61 2.3E-65 461.1 47.6 382 5-391 22-403 (404)
6 2v7y_A Chaperone protein DNAK; 100.0 5.2E-60 1.8E-64 465.1 46.9 380 7-428 3-386 (509)
7 3qfu_A 78 kDa glucose-regulate 100.0 6.7E-60 2.3E-64 453.2 46.5 377 6-390 18-394 (394)
8 4gni_A Putative heat shock pro 100.0 3.5E-58 1.2E-62 442.6 43.5 379 5-391 12-403 (409)
9 1dkg_D Molecular chaperone DNA 100.0 6.9E-57 2.4E-61 430.2 43.6 371 7-389 3-382 (383)
10 1jce_A ROD shape-determining p 100.0 6.9E-41 2.4E-45 314.7 23.9 311 6-391 3-328 (344)
11 3h1q_A Ethanolamine utilizatio 100.0 1.7E-27 5.9E-32 216.0 20.6 202 121-386 71-272 (272)
12 4a2a_A Cell division protein F 100.0 1.1E-26 3.7E-31 221.4 26.1 201 156-391 168-396 (419)
13 1k8k_A ARP3, actin-like protei 100.0 4.5E-28 1.5E-32 233.2 15.4 315 1-388 1-387 (418)
14 2fsj_A Hypothetical protein TA 99.9 9.2E-28 3.2E-32 224.1 13.1 206 143-387 120-343 (346)
15 2fxu_A Alpha-actin-1, actin, a 99.9 7.6E-27 2.6E-31 221.1 16.4 299 5-387 4-348 (375)
16 2ych_A Competence protein PILM 99.9 4.6E-27 1.6E-31 223.5 14.3 322 5-387 12-373 (377)
17 2zgy_A Plasmid segregation pro 99.9 1.4E-23 4.8E-28 194.4 15.8 204 143-386 96-319 (320)
18 1k8k_B ARP2, actin-like protei 99.9 2.3E-24 7.7E-29 205.1 1.6 215 143-388 105-364 (394)
19 3js6_A Uncharacterized PARM pr 99.8 4.8E-20 1.7E-24 171.8 16.9 211 143-391 114-339 (355)
20 3dwl_A Actin-related protein 3 99.8 2.1E-21 7.1E-26 185.0 6.7 226 142-388 123-396 (427)
21 4apw_A ALP12; actin-like prote 99.8 1.1E-20 3.7E-25 174.9 5.6 204 142-389 105-325 (329)
22 3qb0_A Actin-related protein 4 99.8 2.6E-18 8.8E-23 165.2 15.1 309 6-387 23-470 (498)
23 4ehu_A Activator of 2-hydroxyi 99.8 8.9E-17 3E-21 145.5 21.7 180 168-390 69-256 (276)
24 4fo0_A Actin-related protein 8 99.7 6.3E-15 2.2E-19 148.0 25.5 118 119-253 170-294 (593)
25 2d0o_A DIOL dehydratase-reacti 99.5 6.3E-15 2.1E-19 138.4 8.2 196 158-389 370-605 (610)
26 1nbw_A Glycerol dehydratase re 99.5 1.1E-14 3.7E-19 137.3 7.9 194 158-387 372-605 (607)
27 1hux_A Activator of (R)-2-hydr 99.2 3.9E-10 1.3E-14 100.9 18.3 171 173-389 77-257 (270)
28 2ews_A Pantothenate kinase; PA 98.9 1.2E-07 4E-12 84.5 19.6 76 306-386 207-286 (287)
29 4am6_A Actin-like protein ARP8 98.7 1.2E-07 4.1E-12 92.4 11.9 124 143-286 222-346 (655)
30 3mdq_A Exopolyphosphatase; str 97.8 0.00097 3.3E-08 60.6 17.7 79 158-246 92-170 (315)
31 2i7n_A Pantothenate kinase 1; 97.7 0.0004 1.4E-08 63.5 12.4 70 312-386 279-358 (360)
32 2ivn_A O-sialoglycoprotein end 97.7 0.029 1E-06 51.2 26.2 67 320-391 230-301 (330)
33 1t6c_A Exopolyphosphatase; alp 97.7 0.002 7E-08 58.4 16.5 78 158-246 100-177 (315)
34 3cet_A Conserved archaeal prot 97.4 0.0031 1E-07 56.6 14.1 69 307-386 244-322 (334)
35 3vov_A Glucokinase, hexokinase 97.4 0.055 1.9E-06 48.7 22.7 71 313-388 216-295 (302)
36 4db3_A Glcnac kinase, N-acetyl 97.3 0.038 1.3E-06 50.4 21.0 69 313-386 248-324 (327)
37 3vgl_A Glucokinase; ROK family 97.3 0.025 8.5E-07 51.5 19.2 74 313-391 231-315 (321)
38 3r8e_A Hypothetical sugar kina 97.3 0.011 3.7E-07 53.9 16.4 69 314-387 240-318 (321)
39 2e2o_A Hexokinase; acetate and 97.3 0.098 3.4E-06 46.9 23.6 71 313-389 218-288 (299)
40 3cer_A Possible exopolyphospha 97.3 0.0011 3.8E-08 60.9 9.5 83 158-246 105-191 (343)
41 4htl_A Beta-glucoside kinase; 97.2 0.042 1.4E-06 49.4 19.7 74 313-391 216-294 (297)
42 2gup_A ROK family protein; sug 97.1 0.13 4.6E-06 45.8 22.5 73 313-390 206-289 (292)
43 2ch5_A NAGK protein; transfera 97.1 0.17 5.9E-06 46.3 27.8 46 141-186 70-118 (347)
44 3eno_A Putative O-sialoglycopr 96.9 0.24 8.3E-06 45.1 22.6 70 318-392 233-307 (334)
45 3l0q_A Xylulose kinase; xlylul 96.9 0.0023 7.7E-08 63.2 8.3 86 305-392 408-493 (554)
46 2qm1_A Glucokinase; alpha-beta 96.9 0.21 7E-06 45.4 21.1 72 313-389 241-322 (326)
47 2itm_A Xylulose kinase, xylulo 96.9 0.0018 6E-08 62.9 7.3 76 315-391 362-437 (484)
48 2zf5_O Glycerol kinase; hypert 96.8 0.003 1E-07 61.5 8.7 75 314-391 369-443 (497)
49 1u6z_A Exopolyphosphatase; alp 96.8 0.023 7.8E-07 55.3 14.5 77 159-246 100-176 (513)
50 3bex_A Type III pantothenate k 96.8 0.021 7.2E-07 49.7 12.9 21 6-26 3-23 (249)
51 4bc3_A Xylulose kinase; transf 96.8 0.0041 1.4E-07 61.1 9.1 78 312-391 407-484 (538)
52 3ll3_A Gluconate kinase; xylul 96.7 0.0033 1.1E-07 61.2 8.1 76 315-392 369-444 (504)
53 3hz6_A Xylulokinase; xylulose, 96.7 0.0045 1.5E-07 60.4 8.8 74 315-392 380-454 (511)
54 3i8b_A Xylulose kinase; strain 96.6 0.0029 1E-07 61.7 7.1 51 339-391 424-474 (515)
55 3djc_A Type III pantothenate k 96.5 0.15 5E-06 44.8 16.3 21 7-27 3-23 (266)
56 3g25_A Glycerol kinase; IDP007 96.4 0.0045 1.5E-07 60.3 6.9 81 307-392 374-455 (501)
57 3ezw_A Glycerol kinase; glycer 96.4 0.0081 2.8E-07 58.8 8.6 81 307-392 372-453 (526)
58 2dpn_A Glycerol kinase; thermu 96.4 0.0073 2.5E-07 58.7 8.0 75 315-391 373-448 (495)
59 1z6r_A MLC protein; transcript 96.4 0.15 5.3E-06 47.9 16.9 71 314-389 314-394 (406)
60 2ap1_A Putative regulator prot 96.3 0.3 1E-05 44.4 18.3 68 313-386 248-324 (327)
61 3ifr_A Carbohydrate kinase, FG 96.3 0.0042 1.4E-07 60.6 6.0 79 307-391 371-450 (508)
62 3h3n_X Glycerol kinase; ATP-bi 96.3 0.0053 1.8E-07 59.8 6.6 81 307-392 373-454 (506)
63 3jvp_A Ribulokinase; PSI-II, N 96.3 0.0051 1.8E-07 60.9 6.6 80 307-391 410-490 (572)
64 3zyy_X Iron-sulfur cluster bin 96.3 0.18 6.2E-06 49.6 17.1 75 302-377 498-576 (631)
65 2p3r_A Glycerol kinase; glycer 96.3 0.0046 1.6E-07 60.3 6.0 81 307-392 371-452 (510)
66 4e1j_A Glycerol kinase; struct 96.3 0.0042 1.4E-07 60.7 5.6 52 339-392 425-476 (520)
67 2d4w_A Glycerol kinase; alpha 96.2 0.015 5.1E-07 56.6 8.8 80 307-391 373-453 (504)
68 1woq_A Inorganic polyphosphate 96.1 0.15 5.1E-06 44.9 14.7 64 320-391 200-264 (267)
69 1z05_A Transcriptional regulat 96.1 0.64 2.2E-05 44.0 19.6 70 313-388 336-415 (429)
70 2w40_A Glycerol kinase, putati 96.0 0.02 6.8E-07 55.7 9.0 80 307-391 376-457 (503)
71 2h3g_X Biosynthetic protein; p 96.0 0.14 4.6E-06 45.1 13.3 21 7-27 1-21 (268)
72 3en9_A Glycoprotease, O-sialog 95.9 1.4 4.7E-05 43.1 23.5 192 141-371 72-282 (540)
73 3hi0_A Putative exopolyphospha 95.8 0.019 6.5E-07 55.7 7.7 76 158-245 103-178 (508)
74 1zbs_A Hypothetical protein PG 95.7 0.091 3.1E-06 47.0 11.5 70 315-391 212-283 (291)
75 1zc6_A Probable N-acetylglucos 95.7 1.1 3.7E-05 40.1 20.5 64 315-388 228-293 (305)
76 2uyt_A Rhamnulokinase; rhamnos 95.7 0.016 5.3E-07 56.3 6.7 80 305-390 361-441 (489)
77 2hoe_A N-acetylglucosamine kin 95.1 2 6.9E-05 39.7 23.7 72 312-388 292-371 (380)
78 3aap_A Ectonucleoside triphosp 94.8 0.15 5.1E-06 46.8 9.8 49 172-220 110-158 (353)
79 3htv_A D-allose kinase, alloki 94.5 2.5 8.7E-05 37.8 19.4 69 316-389 221-300 (310)
80 3qbx_A Anhydro-N-acetylmuramic 94.4 0.12 4.2E-06 47.2 8.0 69 320-391 267-339 (371)
81 1q5l_A Chaperone protein DNAK; 93.8 0.016 5.5E-07 45.1 0.9 32 397-428 14-45 (135)
82 2yhw_A Bifunctional UDP-N-acet 93.7 3.9 0.00013 37.1 23.6 52 158-220 124-175 (343)
83 3h6e_A Carbohydrate kinase, FG 93.1 0.075 2.6E-06 51.2 4.6 72 312-389 362-436 (482)
84 3cqy_A Anhydro-N-acetylmuramic 90.9 0.52 1.8E-05 43.1 7.1 69 317-389 271-343 (370)
85 3cj1_A Ectonucleoside triphosp 90.4 1.8 6E-05 41.1 10.5 20 201-220 189-208 (456)
86 2yhx_A Hexokinase B; transfera 90.1 1 3.5E-05 42.8 8.7 55 156-220 164-220 (457)
87 4g9i_A Hydrogenase maturation 88.8 1.4 4.8E-05 44.8 9.0 63 322-389 693-760 (772)
88 3epq_A Putative fructokinase; 88.7 3.6 0.00012 36.6 10.9 71 314-389 204-290 (302)
89 3ttc_A HYPF, transcriptional r 88.3 1.9 6.5E-05 42.7 9.4 64 320-388 585-651 (657)
90 3ven_A O-carbamoyltransferase 88.0 21 0.00071 34.8 22.2 80 308-392 280-361 (576)
91 1sz2_A Glucokinase, glucose ki 87.7 15 0.00052 32.9 25.8 54 166-220 99-156 (332)
92 3vth_A Hydrogenase maturation 87.4 1.9 6.7E-05 43.6 9.0 67 320-391 679-750 (761)
93 3ezw_A Glycerol kinase; glycer 86.6 0.47 1.6E-05 46.2 4.0 23 4-26 2-24 (526)
94 3mcp_A Glucokinase; structural 85.9 7.8 0.00027 35.5 11.6 20 5-24 8-27 (366)
95 3o8m_A Hexokinase; rnaseh-like 85.9 6.4 0.00022 37.5 11.3 56 155-220 185-242 (485)
96 3i8b_A Xylulose kinase; strain 84.0 0.9 3.1E-05 44.1 4.6 23 1-24 1-23 (515)
97 3l0q_A Xylulose kinase; xlylul 83.0 0.92 3.1E-05 44.5 4.2 25 1-26 1-25 (554)
98 1bdg_A Hexokinase; phosphotran 82.9 4.1 0.00014 38.6 8.5 55 155-219 172-228 (451)
99 3ifr_A Carbohydrate kinase, FG 82.8 0.98 3.4E-05 43.7 4.3 26 1-26 1-27 (508)
100 4bc3_A Xylulose kinase; transf 82.3 0.97 3.3E-05 44.1 4.0 21 6-26 10-30 (538)
101 3h3n_X Glycerol kinase; ATP-bi 82.3 1.1 3.9E-05 43.3 4.5 25 1-26 1-25 (506)
102 3jvp_A Ribulokinase; PSI-II, N 81.9 0.94 3.2E-05 44.6 3.8 24 1-25 1-24 (572)
103 3ll3_A Gluconate kinase; xylul 81.7 1.1 3.7E-05 43.4 4.1 24 1-26 1-24 (504)
104 1iv0_A Hypothetical protein; r 81.3 1.3 4.4E-05 32.0 3.4 20 7-26 2-21 (98)
105 3h6e_A Carbohydrate kinase, FG 80.8 0.92 3.1E-05 43.6 3.2 25 1-25 1-25 (482)
106 1saz_A Probable butyrate kinas 79.8 5.7 0.00019 36.7 8.2 72 313-387 272-347 (381)
107 1vhx_A Putative holliday junct 79.8 1.4 4.6E-05 34.8 3.3 21 6-26 3-23 (150)
108 2aa4_A Mannac kinase, putative 78.9 3.8 0.00013 36.1 6.5 70 313-387 212-287 (289)
109 2e1z_A Propionate kinase; TDCD 78.1 4.1 0.00014 37.8 6.4 69 314-386 309-406 (415)
110 2p3r_A Glycerol kinase; glycer 77.6 1.8 6E-05 42.0 4.1 21 5-25 2-22 (510)
111 3hm8_A Hexokinase-3; glucose, 77.6 25 0.00086 33.0 11.7 33 158-190 163-198 (445)
112 1cza_N Hexokinase type I; stru 76.7 17 0.00059 37.8 11.4 56 154-219 630-688 (917)
113 1nu0_A Hypothetical protein YQ 76.2 3.3 0.00011 32.0 4.5 21 6-26 3-23 (138)
114 2uyt_A Rhamnulokinase; rhamnos 75.8 1.7 5.9E-05 41.7 3.5 20 5-24 3-22 (489)
115 3g25_A Glycerol kinase; IDP007 75.6 2.1 7.3E-05 41.2 4.1 20 6-25 6-25 (501)
116 4e1j_A Glycerol kinase; struct 75.1 2.2 7.5E-05 41.4 4.1 20 6-25 26-45 (520)
117 3hz6_A Xylulokinase; xylulose, 74.9 2.4 8.1E-05 41.1 4.2 22 5-26 4-25 (511)
118 1g99_A Acetate kinase; alpha/b 73.5 7.8 0.00027 35.8 7.0 71 313-387 300-397 (408)
119 1cza_N Hexokinase type I; stru 72.9 30 0.001 36.1 12.0 54 156-219 184-240 (917)
120 2zf5_O Glycerol kinase; hypert 72.5 2.5 8.6E-05 40.7 3.7 20 6-25 3-22 (497)
121 3o8m_A Hexokinase; rnaseh-like 71.6 18 0.00062 34.4 9.3 57 200-256 78-140 (485)
122 3f9m_A Glucokinase; hexokinase 71.5 21 0.00073 33.8 9.6 33 158-190 187-222 (470)
123 1hjr_A Holliday junction resol 68.9 6.5 0.00022 31.1 4.8 19 6-24 1-19 (158)
124 3epq_A Putative fructokinase; 68.9 12 0.0004 33.3 7.1 51 158-219 90-140 (302)
125 2w40_A Glycerol kinase, putati 68.4 3.3 0.00011 40.0 3.5 21 6-26 4-24 (503)
126 2dpn_A Glycerol kinase; thermu 66.9 3.3 0.00011 39.8 3.2 21 6-26 2-22 (495)
127 3zx3_A Ectonucleoside triphosp 65.9 9.6 0.00033 35.9 6.0 50 171-220 150-199 (452)
128 2d4w_A Glycerol kinase; alpha 65.8 4 0.00014 39.4 3.5 21 6-26 2-22 (504)
129 2itm_A Xylulose kinase, xylulo 63.6 4.7 0.00016 38.6 3.6 19 7-25 1-19 (484)
130 4ep4_A Crossover junction endo 63.0 6 0.00021 31.6 3.5 19 6-24 1-19 (166)
131 2yhx_A Hexokinase B; transfera 62.3 44 0.0015 31.5 9.9 56 200-255 59-120 (457)
132 4am6_A Actin-like protein ARP8 60.9 4.5 0.00015 39.8 2.9 27 5-31 39-65 (655)
133 2f9w_A Pantothenate kinase; CO 56.2 9.7 0.00033 33.2 3.9 21 6-26 23-44 (271)
134 2iir_A Acetate kinase; transfe 52.7 24 0.00081 32.6 6.0 48 313-364 300-348 (403)
135 2q2r_A Glucokinase 1, putative 52.5 28 0.00095 31.8 6.7 20 6-25 29-48 (373)
136 4ijn_A Acetate kinase, acetoki 50.3 23 0.00077 32.6 5.5 49 312-364 300-349 (398)
137 1nbw_A Glycerol dehydratase re 49.4 9.2 0.00031 36.9 2.8 30 144-173 132-161 (607)
138 1zxo_A Conserved hypothetical 47.8 8.1 0.00028 34.0 2.1 44 339-387 232-277 (291)
139 1bdg_A Hexokinase; phosphotran 46.6 88 0.003 29.4 9.1 56 200-255 66-128 (451)
140 3lm2_A Putative kinase; struct 45.8 10 0.00036 32.0 2.4 40 167-220 90-129 (226)
141 4h0p_A Acetate kinase; askha ( 45.2 23 0.0008 32.9 4.7 53 312-364 323-378 (438)
142 3khy_A Propionate kinase; csgi 44.4 23 0.0008 32.3 4.5 47 314-364 292-339 (384)
143 3hm8_A Hexokinase-3; glucose, 42.6 96 0.0033 29.0 8.6 25 200-224 57-81 (445)
144 3r9p_A ACKA; ssgcid, seattle s 42.1 37 0.0013 31.1 5.5 49 312-364 291-340 (391)
145 3nuw_A 2-OXO-3-deoxygalactonat 42.0 20 0.00069 31.5 3.7 45 341-388 248-292 (295)
146 1zxo_A Conserved hypothetical 42.0 2.1 7E-05 38.0 -2.8 44 143-187 59-104 (291)
147 2ap1_A Putative regulator prot 41.9 84 0.0029 27.8 8.1 53 198-251 20-72 (327)
148 1msz_A DNA-binding protein smu 40.7 24 0.00083 24.5 3.1 27 146-172 35-61 (86)
149 1saz_A Probable butyrate kinas 37.3 33 0.0011 31.5 4.6 21 6-26 2-22 (381)
150 2qm1_A Glucokinase; alpha-beta 35.3 89 0.003 27.5 7.1 49 202-250 6-54 (326)
151 1zc6_A Probable N-acetylglucos 35.1 1.2E+02 0.0042 26.4 7.9 53 202-254 11-64 (305)
152 3lwd_A 6-phosphogluconolactona 35.0 53 0.0018 27.6 5.1 49 310-363 9-57 (226)
153 4db3_A Glcnac kinase, N-acetyl 34.3 1.1E+02 0.0038 27.1 7.6 53 198-251 20-72 (327)
154 3f9m_A Glucokinase; hexokinase 34.2 1.2E+02 0.0042 28.5 7.9 25 200-224 75-99 (470)
155 3sk3_A Acetate kinase, acetoki 33.1 50 0.0017 30.6 4.9 51 311-364 314-365 (415)
156 3t69_A Putative 2-dehydro-3-de 32.7 32 0.0011 30.8 3.5 48 341-391 260-307 (330)
157 4h0o_A Acetate kinase; askha ( 32.4 74 0.0025 29.2 5.8 49 312-364 303-352 (404)
158 3kbq_A Protein TA0487; structu 32.0 68 0.0023 25.6 5.0 39 322-368 52-92 (172)
159 3nwp_A 6-phosphogluconolactona 31.9 82 0.0028 26.5 5.8 46 313-363 16-61 (233)
160 2q2r_A Glucokinase 1, putative 30.3 34 0.0012 31.2 3.5 72 313-389 283-372 (373)
161 2hoe_A N-acetylglucosamine kin 28.8 1.8E+02 0.006 26.4 8.1 50 201-250 86-135 (380)
162 1zbs_A Hypothetical protein PG 28.7 74 0.0025 27.6 5.3 48 204-252 2-51 (291)
163 3lhi_A Putative 6-phosphogluco 28.3 96 0.0033 26.0 5.7 47 312-363 12-58 (232)
164 3djc_A Type III pantothenate k 26.8 1.7E+02 0.0057 25.2 7.0 17 204-220 4-20 (266)
165 3zyy_X Iron-sulfur cluster bin 26.4 1.7E+02 0.0057 28.9 7.6 96 201-352 205-302 (631)
166 2d0o_A DIOL dehydratase-reacti 26.3 54 0.0018 31.6 3.9 28 143-170 129-156 (610)
167 2ch5_A NAGK protein; transfera 25.9 1.7E+02 0.0056 26.0 7.2 53 203-255 7-61 (347)
168 2aa4_A Mannac kinase, putative 25.9 1.3E+02 0.0043 25.9 6.3 47 204-250 3-49 (289)
169 1hnj_A Beta-ketoacyl-acyl carr 25.4 95 0.0032 27.2 5.4 49 313-364 211-259 (317)
170 3oc6_A 6-phosphogluconolactona 23.9 67 0.0023 27.4 3.9 44 312-360 17-60 (248)
171 3tx2_A Probable 6-phosphogluco 23.6 68 0.0023 27.4 3.9 44 312-360 17-60 (251)
172 3ico_A 6PGL, 6-phosphogluconol 23.6 67 0.0023 27.7 3.9 44 312-360 33-76 (268)
173 4e1p_A Protein LSR2; anti-para 23.1 1.5E+02 0.0053 18.9 4.9 33 288-320 18-53 (61)
174 3eno_A Putative O-sialoglycopr 22.3 1.4E+02 0.0048 26.6 5.9 46 314-359 48-93 (334)
175 2ivn_A O-sialoglycoprotein end 22.2 1.6E+02 0.0055 26.1 6.3 68 314-383 43-116 (330)
176 3cer_A Possible exopolyphospha 21.9 4.2E+02 0.014 23.6 9.7 30 200-229 14-44 (343)
177 2x3e_A 3-oxoacyl-[acyl-carrier 21.8 1.3E+02 0.0044 26.6 5.6 47 314-363 218-264 (331)
178 3r6m_A YEAZ, resuscitation pro 21.7 1.1E+02 0.0039 25.3 4.7 64 318-383 35-104 (213)
179 2yhw_A Bifunctional UDP-N-acet 21.4 2.9E+02 0.0099 24.4 7.9 29 200-228 28-56 (343)
180 1mzj_A Beta-ketoacylsynthase I 21.3 1.3E+02 0.0043 26.8 5.5 47 314-363 225-271 (339)
181 1ub7_A 3-oxoacyl-[acyl-carrier 20.6 1.4E+02 0.0046 26.3 5.5 49 313-364 213-261 (322)
182 2e2o_A Hexokinase; acetate and 20.6 1.8E+02 0.006 25.2 6.2 50 203-252 3-54 (299)
183 2nrh_A Transcriptional activat 20.1 42 0.0014 28.0 1.8 63 308-389 144-206 (219)
No 1
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=2.2e-67 Score=521.23 Aligned_cols=419 Identities=64% Similarity=0.980 Sum_probs=389.7
Q ss_pred CCCCCceEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEeCCceEecHhhhhhhhhCCCcchhhhhhhcCCCC
Q 014219 1 MAGKAGVAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTDTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRF 80 (428)
Q Consensus 1 m~~~~~~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~~~~~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~ 80 (428)
|+ .+.+||||||||||++|++.+|.++++.++.|++.+||+|+|.+++++||..|..+...+|.++++++|+++|+..
T Consensus 1 M~--m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~ 78 (554)
T 1yuw_A 1 MS--KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF 78 (554)
T ss_dssp CC--SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCS
T ss_pred CC--CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCC
Confidence 76 3579999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred CChhhhhhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCHHHHHH
Q 014219 81 SDVSVQSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQA 160 (428)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~~~~~~ 160 (428)
.+..++..++.+|+.++. .++.+.+.+.+.+....++++++++++|+++++.++.+++.++..+++|||++|+..+|+.
T Consensus 79 ~d~~v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a 157 (554)
T 1yuw_A 79 DDAVVQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQA 157 (554)
T ss_dssp SCSHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHH
T ss_pred CcHHHHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 988899999999999884 4788888899999888899999999999999999999999888999999999999999999
Q ss_pred HHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchH
Q 014219 161 TEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGV 240 (428)
Q Consensus 161 l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~ 240 (428)
+++|++.||++.+.++.||+|||++|...... ..+..++|+|+||||+|++++++.++.+++++..+...+||+
T Consensus 158 ~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~------~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~ 231 (554)
T 1yuw_A 158 TKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV------GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGE 231 (554)
T ss_dssp HHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTC------SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHH
T ss_pred HHHHHHHcCCCeEEEeCcHHHHHHHHHhhccC------CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHH
Confidence 99999999999999999999999999876532 136889999999999999999999999999988888899999
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeecccCcceeEEeeHHHHHHHHHHHHH
Q 014219 241 DFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEGINFSSTITRARFEQLNMDLFE 320 (428)
Q Consensus 241 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~ 320 (428)
+||+.|.+++..++..+++.++..+++.+.+|+.+||++|+.|+......+.++.+.+|.+....++|++|+++++|+++
T Consensus 232 d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~ 311 (554)
T 1yuw_A 232 DFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFR 311 (554)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHH
Confidence 99999999999999988888888889999999999999999999888888888877888888999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcCCCCCcCcce
Q 014219 321 KCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSGVCSDKAEDL 400 (428)
Q Consensus 321 ~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~~~~~~~~~~ 400 (428)
++.+.+.++|+.++....+++.|+|+||+|++|+|++.|++.|++.++..+.||+++||+||+++++.+.+...++.+++
T Consensus 312 ~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~ 391 (554)
T 1yuw_A 312 GTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391 (554)
T ss_dssp HTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSS
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccce
Confidence 99999999999998877889999999999999999999999997788889999999999999999999988545667889
Q ss_pred EEeecccceeeeEEcCCcccEEEeCCCC
Q 014219 401 VILDLKPCSHEPKIATGSNPSLLICNHL 428 (428)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (428)
.+.+++|+|+|+++.+|.+.+|||||++
T Consensus 392 ~~~dv~p~slgi~~~~g~~~~li~r~t~ 419 (554)
T 1yuw_A 392 LLLDVTPLSLGIETAGGVMTVLIKRNTT 419 (554)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCB
T ss_pred EEEEeeeeEEEEEecCceEEEEEECCCc
Confidence 9999999999999999999999999984
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.4e-66 Score=523.39 Aligned_cols=418 Identities=30% Similarity=0.507 Sum_probs=386.6
Q ss_pred eEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEeCCceEecHhhhhhhhhCCCcchhhhhhhcCCCCCChhhh
Q 014219 7 VAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTDTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSDVSVQ 86 (428)
Q Consensus 7 ~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~~~~~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~~~~~~~ 86 (428)
.+||||||||||++|++.++.++++.+..|++.+||+|+|.+++++||..|..+...+|.++++++|+++|+...+..++
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 82 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFE 82 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHH
T ss_pred cEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHH
Confidence 48999999999999999999999999999999999999999889999999999999999999999999999999988888
Q ss_pred hhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCHHHHHHHHHHHH
Q 014219 87 SDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQATEDAAT 166 (428)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~~~~~~l~~a~~ 166 (428)
...+.+|+.+....++...+.+.+.++...++++++++++|+++++.+...++.++..+++|||++|+..+|+.+++|++
T Consensus 83 ~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~ 162 (675)
T 3d2f_A 83 QESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAAR 162 (675)
T ss_dssp HHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 88999999999888888888888888878899999999999999999999999888999999999999999999999999
Q ss_pred HcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHH
Q 014219 167 QCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRM 246 (428)
Q Consensus 167 ~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l 246 (428)
.||++.+.++.||.|||++|+..... .......+..++|+|+||||||++++++.++.+++++..++..+||++||+.|
T Consensus 163 ~AGl~~~~li~EP~AAAlaygl~~~~-~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 163 IAGLNPVRIVNDVTAAGVSYGIFKTD-LPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHCSC-CCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HcCCceEEEEcchHHHHHHHhhhccc-cccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 99999999999999999999765421 00001247889999999999999999999999999988887899999999999
Q ss_pred HHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeecccCcceeEEeeHHHHHHHHHHHHHHHHHHH
Q 014219 247 VDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEGINFSSTITRARFEQLNMDLFEKCIEHV 326 (428)
Q Consensus 247 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~~i 326 (428)
.+++..++..+++.++..+++.+.+|+.+||++|+.|+......+.++.+.+|.+..+.++|++|+++++|+++++...+
T Consensus 242 ~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i 321 (675)
T 3d2f_A 242 TEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPV 321 (675)
T ss_dssp HHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHH
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888889999999999999999999888788888877788888999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcCCCCCcCcceEEeecc
Q 014219 327 DTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSGVCSDKAEDLVILDLK 406 (428)
Q Consensus 327 ~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~~~~~~~~~~~~~~~~ 406 (428)
.++|+.++.+..+++.|+|+||+|++|+|++.|++.| +.++..+.||+++||+||+++++.+++ .++++++.+.+++
T Consensus 322 ~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~--~~~v~~~~l~Dv~ 398 (675)
T 3d2f_A 322 TKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSP--TLRVRPFKFEDIH 398 (675)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCS--SCCCCCCEEEEEE
T ss_pred HHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCC--CCcccceEEEeee
Confidence 9999999887788999999999999999999999999 788888999999999999999999998 6778899999999
Q ss_pred cceeeeEEcCCc----ccEEEeCCCC
Q 014219 407 PCSHEPKIATGS----NPSLLICNHL 428 (428)
Q Consensus 407 ~~~~~~~~~~~~----~~~~~~~~~~ 428 (428)
|+|+|+++.++. +.+|||||++
T Consensus 399 p~slgi~~~~~~~~~~~~~li~rnt~ 424 (675)
T 3d2f_A 399 PYSVSYSWDKQVEDEDHMEVFPAGSS 424 (675)
T ss_dssp CSCEEEEECCTTCSCSEEEEECTTEE
T ss_pred ecceEeeecCCCCCcceEEEEcCCCC
Confidence 999999999874 8899999974
No 3
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=4.8e-65 Score=509.10 Aligned_cols=406 Identities=46% Similarity=0.754 Sum_probs=378.1
Q ss_pred eEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEe-CCceEecHhhhhhhhhCCCcchhhhhhhcCCCCCChhh
Q 014219 7 VAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFT-DTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSDVSV 85 (428)
Q Consensus 7 ~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~-~~~~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~~~~~~ 85 (428)
.+||||||||||++|++.++.++++.+..|.+.+||+|+|. ++.+++|..|..+...+|.++++++|+++|+..+++.+
T Consensus 3 ~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 82 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp CEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHHH
T ss_pred cEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHHH
Confidence 69999999999999999999999999999999999999996 55799999999999999999999999999999999999
Q ss_pred hhhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCHHHHHHHHHHH
Q 014219 86 QSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQATEDAA 165 (428)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~~~~~~l~~a~ 165 (428)
+...+.+|+.+...+++...+.+ .+. .++++++.+++|+++++.+...++.++..+++|||++|+..+|+.+++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~~~~--~~~--~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa 158 (605)
T 4b9q_A 83 QRDVSIMPFKIIAADNGDAWVEV--KGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHTTCSSEEEECTTSBEEEEE--TTE--EECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCceEEEE--CCE--EECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 99999999999988888776655 453 59999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeC----CeEEEEEecCCCCcchHH
Q 014219 166 TQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIEN----GVIRVRATDGNTRLGGVD 241 (428)
Q Consensus 166 ~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~----~~~~~~~~~~~~~~Gg~~ 241 (428)
+.||++.+.++.||+|||++|...... .+..++|+|+||||+|++++++.+ +.+++++..++..+||++
T Consensus 159 ~~AGl~v~~li~EP~AAAlaygl~~~~-------~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d 231 (605)
T 4b9q_A 159 RIAGLEVKRIINEPTAAALAYGLDKGT-------GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGED 231 (605)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHTTSCC-------SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHH
T ss_pred HHcCCceEEEeCcHHHHHHHhhhhccC-------CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHH
Confidence 999999999999999999999876543 378899999999999999999988 899999999989999999
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeecccC----cceeEEeeHHHHHHHHHH
Q 014219 242 FNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEG----INFSSTITRARFEQLNMD 317 (428)
Q Consensus 242 id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~ 317 (428)
||+.|.+++.+++..+.+.+...+++.+.+|+.+||++|+.|+......+.++.+..+ .+..+.++|++|+++++|
T Consensus 232 ~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~ 311 (605)
T 4b9q_A 232 FDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVED 311 (605)
T ss_dssp HHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHH
Confidence 9999999999999998888888899999999999999999999998888888765443 467889999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcCCCCCcC
Q 014219 318 LFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSGVCSDKA 397 (428)
Q Consensus 318 ~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~~~~~~~ 397 (428)
+++++...+.++|+.++....+++.|+|+||+|++|++++.|++.| +.++....||+++||+|||++|+.+++. .
T Consensus 312 ~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~ 386 (605)
T 4b9q_A 312 LVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----V 386 (605)
T ss_dssp HHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----S
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----C
Confidence 9999999999999999888888999999999999999999999999 7888999999999999999999999984 4
Q ss_pred cceEEeecccceeeeEEcCCcccEEEeCCCC
Q 014219 398 EDLVILDLKPCSHEPKIATGSNPSLLICNHL 428 (428)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (428)
+++.+.+++|+|+|+++.+|.+.+|||||++
T Consensus 387 ~~~~l~dv~p~slgie~~~g~~~~ii~rnt~ 417 (605)
T 4b9q_A 387 KDVLLLDVTPLSLGIETMGGVMTTLIAKNTT 417 (605)
T ss_dssp CSEEEECBCSSCEEEEETTTEEEEEECTTCB
T ss_pred CceEEEeeeeeEEEEEEcCCEEEEEEeCCCc
Confidence 7889999999999999999999999999985
No 4
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=3.2e-64 Score=503.12 Aligned_cols=406 Identities=46% Similarity=0.761 Sum_probs=371.9
Q ss_pred eEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEe-CCceEecHhhhhhhhhCCCcchhhhhhhcCCCCCChhh
Q 014219 7 VAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFT-DTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSDVSV 85 (428)
Q Consensus 7 ~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~-~~~~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~~~~~~ 85 (428)
.+||||||||||++|++.+|.++++.++.|.+.+||+|+|. +++++||..|..+...+|+++++++|+++|+...+..+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 58999999999999999999999999999999999999994 56789999999999999999999999999998888888
Q ss_pred hhhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCHHHHHHHHHHH
Q 014219 86 QSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQATEDAA 165 (428)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~~~~~~l~~a~ 165 (428)
+...+.+|+.+..+.++...+.+ .+. .++++++.+++|+++++.++..++.++..+++|||++|+..+|+.+++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~--~g~--~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV--KGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE--TTE--EECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE--CCE--EEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 88888899998888888777766 453 58999999999999999999999988899999999999999999999999
Q ss_pred HHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEe----CCeEEEEEecCCCCcchHH
Q 014219 166 TQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIE----NGVIRVRATDGNTRLGGVD 241 (428)
Q Consensus 166 ~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~----~~~~~~~~~~~~~~~Gg~~ 241 (428)
+.||++.+.++.||+|||++|+..... .+..++|+|+||||+|++++++. ++.+++++..+...+||++
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~~-------~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d 231 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKGT-------GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGED 231 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSSS-------SEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGG
T ss_pred HHcCCceEEEecCHHHHHHHhhhcccC-------CCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHH
Confidence 999999999999999999999876531 37889999999999999999998 7889999888888999999
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeecccC----cceeEEeeHHHHHHHHHH
Q 014219 242 FNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEG----INFSSTITRARFEQLNMD 317 (428)
Q Consensus 242 id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~ 317 (428)
||+.|.+++.+++..+++.++..+++.+.+|+.+||++|+.|+......+.++.+.++ .+..+.++|++|+++++|
T Consensus 232 ~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~ 311 (605)
T 2kho_A 232 FDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVED 311 (605)
T ss_dssp THHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHH
Confidence 9999999999999988888888889999999999999999999888888888765542 456779999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcCCCCCcC
Q 014219 318 LFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSGVCSDKA 397 (428)
Q Consensus 318 ~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~~~~~~~ 397 (428)
+++++...+.++|+.++....+++.|+|+||+|++|+|++.|++.| +.++..+.||+++||+||+++++.+++. .
T Consensus 312 ~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~ 386 (605)
T 2kho_A 312 LVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----V 386 (605)
T ss_dssp TTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----C
T ss_pred HHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----c
Confidence 9999999999999999887788999999999999999999999999 7788899999999999999999999883 4
Q ss_pred cceEEeecccceeeeEEcCCcccEEEeCCCC
Q 014219 398 EDLVILDLKPCSHEPKIATGSNPSLLICNHL 428 (428)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (428)
+++.+.+++|+|+|+++.+|.+.+|||||++
T Consensus 387 ~~~~l~dv~p~slgi~~~~g~~~~li~r~t~ 417 (605)
T 2kho_A 387 KDVLLLDVTPLSLGIETMGGVMTTLIAKNTT 417 (605)
T ss_dssp CCCCCSBCCCCCEEEEETTTEEEEEECTTBC
T ss_pred cCceEEeeeeeeccccccCCceEEEEecccc
Confidence 6788999999999999999999999999985
No 5
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=6.8e-61 Score=461.12 Aligned_cols=382 Identities=67% Similarity=1.029 Sum_probs=357.9
Q ss_pred CceEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEeCCceEecHhhhhhhhhCCCcchhhhhhhcCCCCCChh
Q 014219 5 AGVAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTDTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSDVS 84 (428)
Q Consensus 5 ~~~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~~~~~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~~~~~ 84 (428)
.+.+||||||||||++|++.++.++++.++.|++++||+|+|.+++++||.+|..+...+|.++++++|+++|+..++..
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~ 101 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDAT 101 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHH
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHH
Confidence 57899999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred hhhhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCHHHHHHHHHH
Q 014219 85 VQSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQATEDA 164 (428)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~~~~~~l~~a 164 (428)
++...+.+|+.+.. .++.+.+.+.+.+....++++++++++|+++++.++..++.++..+++|||++|+..+|+.+++|
T Consensus 102 ~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a 180 (404)
T 3i33_A 102 VQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDA 180 (404)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHH
Confidence 99999999998875 67888999999998888999999999999999999999998899999999999999999999999
Q ss_pred HHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHH
Q 014219 165 ATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNN 244 (428)
Q Consensus 165 ~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~ 244 (428)
++.||++.+.+++||+|||++|...... ....+..++|||+||||||++++++.++.+++++..+...+||++||+
T Consensus 181 ~~~AGl~~~~li~Ep~AAa~~~~~~~~~----~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 256 (404)
T 3i33_A 181 GTITGLNVLRIINEPTAAAIAYGLDKKG----CAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDN 256 (404)
T ss_dssp HHHHTCEEEEEEEHHHHHHHHTTTTSSC----SSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHH
T ss_pred HHHcCCCeEEEeccHHHHHHHHHhhccc----ccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHH
Confidence 9999999999999999999999876652 112478899999999999999999999999999888889999999999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeecccCcceeEEeeHHHHHHHHHHHHHHHHH
Q 014219 245 RMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEGINFSSTITRARFEQLNMDLFEKCIE 324 (428)
Q Consensus 245 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~ 324 (428)
.|.+++.+++..+.+..+..+++.+.+|+.+||++|+.|+......+.++...+|.+..+.+++++|+++++|.++++.+
T Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~ 336 (404)
T 3i33_A 257 RMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLE 336 (404)
T ss_dssp HHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHH
T ss_pred HHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888999999999999999999999988888888888888899999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcC
Q 014219 325 HVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSG 391 (428)
Q Consensus 325 ~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~ 391 (428)
.+.++|+.++....+++.|+|+||+|++|+|++.|++.|++.++..+.||++++|+||+++|+.+++
T Consensus 337 ~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 337 PVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999998877789999999999999999999999998889999999999999999999999876
No 6
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=5.2e-60 Score=465.12 Aligned_cols=380 Identities=46% Similarity=0.754 Sum_probs=345.4
Q ss_pred eEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEeCCceEecHhhhhhhhhCCCcchhhhhhhcCCCCCChhhh
Q 014219 7 VAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTDTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSDVSVQ 86 (428)
Q Consensus 7 ~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~~~~~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~~~~~~~ 86 (428)
.+|||||||++|+++++.++.++++.++.|.+.+||+|+|.+++++||++|..+...+| +++.++|+++|++..
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 58999999999999999999999999999999999999998888999999999999999 999999999987321
Q ss_pred hhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCHHHHHHHHHHHH
Q 014219 87 SDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQATEDAAT 166 (428)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~~~~~~l~~a~~ 166 (428)
+ ...+. .++++++++++|++++..++..++.++..+++|||++|+..+|+.+++|++
T Consensus 77 ---------~------------~~~g~--~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 77 ---------V------------EIEGK--QYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp ---------E------------EETTE--EECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ---------E------------EECCE--EEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1 12242 478999999999999999999998888899999999999999999999999
Q ss_pred HcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHH
Q 014219 167 QCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRM 246 (428)
Q Consensus 167 ~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l 246 (428)
.||++.+.++.||+|||++|..... .+..++|+|+||||||+++++..++.+++++..+...+||.+||+.|
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~~--------~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l 205 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDKE--------EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVI 205 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGGS--------CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HcCCCeEEEecCHHHHHHHHhhccC--------CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHH
Confidence 9999999999999999999987653 37889999999999999999999899999888887899999999999
Q ss_pred HHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeeccc---C-cceeEEeeHHHHHHHHHHHHHHH
Q 014219 247 VDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYE---G-INFSSTITRARFEQLNMDLFEKC 322 (428)
Q Consensus 247 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~---~-~~~~~~i~~~~~~~~~~~~i~~i 322 (428)
.+++.+++..+++.++..+++.+.+|+.+||++|+.|+......+.++.+.+ | .+..+.+++++|+++++|+++++
T Consensus 206 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i 285 (509)
T 2v7y_A 206 IDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERT 285 (509)
T ss_dssp HHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTT
T ss_pred HHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHH
Confidence 9999999988888777778899999999999999999988888888776554 2 34667999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcCCCCCcCcceEE
Q 014219 323 IEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSGVCSDKAEDLVI 402 (428)
Q Consensus 323 ~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~~~~~~~~~~~~ 402 (428)
.+.+.++|+.++....+++.|+|+||+|++|+|++.|++.| +.++..+.||+++||+||+++++.+++. .+++.+
T Consensus 286 ~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~ 360 (509)
T 2v7y_A 286 MGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVL 360 (509)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCC
T ss_pred HHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceE
Confidence 99999999999877778999999999999999999999999 7788889999999999999999999883 467889
Q ss_pred eecccceeeeEEcCCcccEEEeCCCC
Q 014219 403 LDLKPCSHEPKIATGSNPSLLICNHL 428 (428)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (428)
.+++|+|+|+++.+|.+.+|||||++
T Consensus 361 ~dv~p~slgi~~~~~~~~~li~~~~~ 386 (509)
T 2v7y_A 361 LDVTPLSLGIETMGGVFTKLIERNTT 386 (509)
T ss_dssp CCBCSSEEEEEETTTEEEEEECTTCB
T ss_pred EEeeccccceeecCCceEEEEeCCCc
Confidence 99999999999999999999999985
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=6.7e-60 Score=453.19 Aligned_cols=377 Identities=58% Similarity=0.933 Sum_probs=355.6
Q ss_pred ceEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEeCCceEecHhhhhhhhhCCCcchhhhhhhcCCCCCChhh
Q 014219 6 GVAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTDTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSDVSV 85 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~~~~~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~~~~~~ 85 (428)
..+||||||||+++++++.++.++++.++.|.+.+||+|+|.++++++|++|......+|.+++.++|+++++..++..+
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 97 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSV 97 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHH
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCHHHHHHHHHHH
Q 014219 86 QSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQATEDAA 165 (428)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~~~~~~l~~a~ 165 (428)
+...+.+|+.+. +.++.+.+.+.+.+....++++++++++|+++++.++.+++.++..+++|+|++|+..+|+.+++|+
T Consensus 98 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 176 (394)
T 3qfu_A 98 QKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAG 176 (394)
T ss_dssp HHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 999999999887 7788899999988888889999999999999999999999988999999999999999999999999
Q ss_pred HHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHH
Q 014219 166 TQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNR 245 (428)
Q Consensus 166 ~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~ 245 (428)
+.||++.+.++.||.|||++|...... .+..++|+|+||||||+++++..++.+++++..++..+||.+||+.
T Consensus 177 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~-------~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~ 249 (394)
T 3qfu_A 177 TIAGLNVLRIVNEPTAAAIAYGLDKSD-------KEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYK 249 (394)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTTTSCS-------SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHcCCceEEEecCHHHHHHHHhhccCC-------CCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHH
Confidence 999999999999999999999665532 4788999999999999999999999999999888899999999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeecccCcceeEEeeHHHHHHHHHHHHHHHHHH
Q 014219 246 MVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEGINFSSTITRARFEQLNMDLFEKCIEH 325 (428)
Q Consensus 246 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~~ 325 (428)
|.+++.+++..+++......++...+|+.+||++|+.|+......+.++.+.++.+..+.+++++|++++++.++++.+.
T Consensus 250 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~ 329 (394)
T 3qfu_A 250 IVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKP 329 (394)
T ss_dssp HHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888889999999999999999999999988888888888888999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhc
Q 014219 326 VDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILS 390 (428)
Q Consensus 326 i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~ 390 (428)
+.++|+.++....+++.|+|+||+|++|+|++.|++.|++.++..+.||++++|.||+++++.++
T Consensus 330 i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 330 VEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99999999887778999999999999999999999999888999999999999999999998864
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=3.5e-58 Score=442.57 Aligned_cols=379 Identities=32% Similarity=0.532 Sum_probs=335.4
Q ss_pred CceEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEeCCceEecHhhhhhhhhCCCcchhhhhhhcCCCCCChh
Q 014219 5 AGVAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTDTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSDVS 84 (428)
Q Consensus 5 ~~~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~~~~~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~~~~~ 84 (428)
++.+||||||||+|+++++.++.++++.++.|.+++||+|+|.+++++||.+|..+...+|.+++.++|+++|+..++..
T Consensus 12 ~~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp -CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CCcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999998876554
Q ss_pred hhhhcccCCeeEEECCCCCceEEEEEC----CeEEEEeHHHHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCHHHHHH
Q 014219 85 VQSDIKHWPFKVIAGPDDKPMVEVKYK----GKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQA 160 (428)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~~~~~~ 160 (428)
+..... ++.. .+.++...+.+... +....++++++++++|+++++.++..++.++..+++|||++|+..+|+.
T Consensus 92 ~~~~~~--~~~~-~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~ 168 (409)
T 4gni_A 92 PTHNHA--SAHP-QEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAA 168 (409)
T ss_dssp CGGGTT--SCCC-EEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred hhhhcc--ccce-ecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 433322 2222 23455666666544 3556799999999999999999999999888999999999999999999
Q ss_pred HHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchH
Q 014219 161 TEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGV 240 (428)
Q Consensus 161 l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~ 240 (428)
+++|++.||++.+.+++||+|||++|..... ....+..++|+|+||||||++++++.++.+++++..++..+||+
T Consensus 169 ~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~-----~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~ 243 (409)
T 4gni_A 169 LIAAAAAADLEVLQLISEPAAAVLAYDARPE-----ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGI 243 (409)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTC-----------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHH
T ss_pred HHHHHHHcCCCeEEEEcCHHHHHHHHhcccc-----cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHH
Confidence 9999999999999999999999999987642 11348899999999999999999999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHhhhC--CCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeecccCcceeEEeeHHHHHHHHHHH
Q 014219 241 DFNNRMVDYFVEEFKRKNK--IDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEGINFSSTITRARFEQLNMDL 318 (428)
Q Consensus 241 ~id~~l~~~l~~~~~~~~~--~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 318 (428)
+||+.|.+++..++....+ .+...+.+.+.+|+.+||++|+.|+......+.++.+.++.+....++|++|+++++|+
T Consensus 244 ~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~ 323 (409)
T 4gni_A 244 ALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTV 323 (409)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHH
Confidence 9999999999999998877 66777899999999999999999999988889998888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCC-Cc------CCCCChhhHHHhHHHHHHHHhcC
Q 014219 319 FEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGK-NL------CRHINADEAVATGAAIQAAILSG 391 (428)
Q Consensus 319 i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~-~v------~~~~~p~~ava~Ga~~~~~~~~~ 391 (428)
++++.+.+.++|+.++....+++.|+|+||+|++|+|++.+++.|+.. .+ ....||++++|+|||++++....
T Consensus 324 ~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 324 FEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 999999999999999887778999999999999999999999999543 34 57889999999999999998765
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=6.9e-57 Score=430.18 Aligned_cols=371 Identities=49% Similarity=0.801 Sum_probs=332.9
Q ss_pred eEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEe-CCceEecHhhhhhhhhCCCcchhhhhhhcCCCCCChhh
Q 014219 7 VAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFT-DTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSDVSV 85 (428)
Q Consensus 7 ~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~-~~~~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~~~~~~ 85 (428)
.+||||||||+++++++.+|.++++.++.|.+.+||+|+|. +++++||+.|..+...+|+++++++|+++++...+..+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 58999999999999999999999999999999999999995 46788999999999999999999999999998888888
Q ss_pred hhhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCHHHHHHHHHHH
Q 014219 86 QSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQATEDAA 165 (428)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~~~~~~l~~a~ 165 (428)
....+.+|+.+..+.++...+.+ ++. .++++++++++|+++++.++..++.++..+++|+|++|+..+|+.+++|+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~--~g~--~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV--KGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE--TTE--EECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE--CCE--EEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 88888899998878777776665 454 58999999999999999999988888889999999999999999999999
Q ss_pred HHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEe----CCeEEEEEecCCCCcchHH
Q 014219 166 TQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIE----NGVIRVRATDGNTRLGGVD 241 (428)
Q Consensus 166 ~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~----~~~~~~~~~~~~~~~Gg~~ 241 (428)
+.||++.+.++.||.|||++|...... .+..++|+|+||||||+++++.. ++.+++++..+...+||++
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~-------~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~ 231 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKGT-------GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGED 231 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC-C-------CEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHH
T ss_pred HHcCCceEEEeccHHHHHHHHHhccCC-------CCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHH
Confidence 999999999999999999999875431 37789999999999999999998 5677777777778999999
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeeccc---C-cceeEEeeHHHHHHHHHH
Q 014219 242 FNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYE---G-INFSSTITRARFEQLNMD 317 (428)
Q Consensus 242 id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~---~-~~~~~~i~~~~~~~~~~~ 317 (428)
||+.|.+++.+++..+.+.++..+++.+.+++.+||++|+.|+......+.++.+.+ | .+..+.+++++|+++++|
T Consensus 232 id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~ 311 (383)
T 1dkg_D 232 FDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVED 311 (383)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHH
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHH
Confidence 999999999999988888777778899999999999999999988777777765443 2 345679999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHh
Q 014219 318 LFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAIL 389 (428)
Q Consensus 318 ~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~ 389 (428)
.++++.+.+.++|++++....+++.|+|+||+|++|+|++.|++.| +.++..+.||+++||+||+++|+.+
T Consensus 312 ~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l 382 (383)
T 1dkg_D 312 LVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVL 382 (383)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhh
Confidence 9999999999999998877678999999999999999999999999 6788899999999999999999875
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=6.9e-41 Score=314.75 Aligned_cols=311 Identities=25% Similarity=0.333 Sum_probs=235.2
Q ss_pred ceEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEeCC--c-eEecHhhhhhhhhCCCcchhhhhhhcCCCCCC
Q 014219 6 GVAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTDT--E-SFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSD 82 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~~~--~-~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~~~ 82 (428)
+.+|||||||+++++++..++ .++ .+||+|++.++ + .++|++|.+....+|.++...
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~----------- 62 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI----------- 62 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE-----------
T ss_pred CceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE-----------
Confidence 368999999999999876433 232 37999999765 3 479999997777766664311
Q ss_pred hhhhhhcccCCeeEEECCCCCceEEEEECCeEEEE-eHHHHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCHHHHHHH
Q 014219 83 VSVQSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQV-AAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQAT 161 (428)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~~~~~~l 161 (428)
+|+. + +....+ .++++++++++++... ..++ ...+++|+|++|+..+|+.+
T Consensus 63 ---------~p~~-----~----------g~i~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~ 114 (344)
T 1jce_A 63 ---------RPMR-----D----------GVIADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAI 114 (344)
T ss_dssp ---------CCEE-----T----------TEESSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHH
T ss_pred ---------ecCC-----C----------CeeCChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHH
Confidence 0110 0 100001 2445555555444331 1122 36899999999999999999
Q ss_pred HHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHH
Q 014219 162 EDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVD 241 (428)
Q Consensus 162 ~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~ 241 (428)
+++++.+|++.+.++.||.||++++..... .+..++|||+||||||+++++.+... ..+...+||++
T Consensus 115 ~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~--------~~~~~lVvDiGggttdvsv~~~~~~~-----~~~~~~lGG~~ 181 (344)
T 1jce_A 115 LDAGLEAGASKVFLIEEPMAAAIGSNLNVE--------EPSGNMVVDIGGGTTEVAVISLGSIV-----TWESIRIAGDE 181 (344)
T ss_dssp HHHHHHTTCSEEEEEEHHHHHHHHTTCCTT--------SSSCEEEEEECSSCEEEEEEETTEEE-----EEEEESCSHHH
T ss_pred HHHHHHcCCCeEeccCCHHHHHHhcCCCCC--------CCceEEEEEeCCCeEEEEEEEcCCEE-----eeCCCCccChh
Confidence 999999999999999999999999986543 26779999999999999999864322 23457999999
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCc------eeEEEe--ecccCcceeEEeeHHHHHH
Q 014219 242 FNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQ------TSIEID--YLYEGINFSSTITRARFEQ 313 (428)
Q Consensus 242 id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~------~~~~~~--~~~~~~~~~~~i~~~~~~~ 313 (428)
||+.|.+++.++++.... ...||++|+.++.... ..+.++ .+.+|.+..+.+++++|++
T Consensus 182 id~~l~~~l~~~~~~~~~-------------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~ 248 (344)
T 1jce_A 182 MDEAIVQYVRETYRVAIG-------------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVRE 248 (344)
T ss_dssp HHHHHHHHHHHHHCEECC-------------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhCcccC-------------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHH
Confidence 999999999877642221 4789999999986542 234443 2335666788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCC-CC-C-CeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhc
Q 014219 314 LNMDLFEKCIEHVDTCLAKAKIDR-TA-V-DDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILS 390 (428)
Q Consensus 314 ~~~~~i~~i~~~i~~~l~~~~~~~-~~-i-~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~ 390 (428)
+++|.++++.+.+.+++++++... .+ + +.|+|+||+|++|+|+++|++.| +.++..+.||++++|+||++++..++
T Consensus 249 ~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 249 ALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 999999999999999999865321 12 3 68999999999999999999999 67888899999999999999998654
Q ss_pred C
Q 014219 391 G 391 (428)
Q Consensus 391 ~ 391 (428)
.
T Consensus 328 ~ 328 (344)
T 1jce_A 328 I 328 (344)
T ss_dssp H
T ss_pred H
Confidence 3
No 11
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.96 E-value=1.7e-27 Score=216.04 Aligned_cols=202 Identities=19% Similarity=0.322 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCHHHHHHHHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccC
Q 014219 121 EISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASG 200 (428)
Q Consensus 121 ~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~~~~~~l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~ 200 (428)
+.....++++++.+....+.....+++++|..|+..+++.++.+++.+|++...++.||+|+++++...
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~----------- 139 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN----------- 139 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-----------
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-----------
Confidence 445677888888777776767789999999999999999999999999999999999999999987642
Q ss_pred ceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHH
Q 014219 201 VKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAK 280 (428)
Q Consensus 201 ~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K 280 (428)
..+|+|+|||+|+++++. ++... .....++||.++|+.+.+++. .. ...+|++|
T Consensus 140 --~~~viDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~------~~-------------~~~ae~~k 193 (272)
T 3h1q_A 140 --DGIVVDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYK------IP-------------FEEAETIK 193 (272)
T ss_dssp --SEEEEEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHT------CC-------------HHHHHHHH
T ss_pred --CEEEEEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhC------CC-------------HHHHHHHH
Confidence 149999999999999987 44432 446689999999999988773 11 47888999
Q ss_pred HHhccCCceeEEEeecccCcceeEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHH
Q 014219 281 RTLSSTIQTSIEIDYLYEGINFSSTITRARFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQ 360 (428)
Q Consensus 281 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~ 360 (428)
+.++ +++++++++.+.++++.+.+.+.++..+ +++.|+|+||++++|++++.++
T Consensus 194 ~~~~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~ 247 (272)
T 3h1q_A 194 KDFS----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFS 247 (272)
T ss_dssp HSST----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHH
T ss_pred HhcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHH
Confidence 8865 4788999999999999999999998753 3679999999999999999999
Q ss_pred hhcCCCCcCCCCChhhHHHhHHHHHH
Q 014219 361 DFFLGKNLCRHINADEAVATGAAIQA 386 (428)
Q Consensus 361 ~~~~~~~v~~~~~p~~ava~Ga~~~~ 386 (428)
+.| +.++..+.+|++++|.||+++|
T Consensus 248 ~~l-~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 248 RFL-GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHH-SSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHh-CCCccccCChHHHHHHHHHhcC
Confidence 999 8899999999999999999864
No 12
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.95 E-value=1.1e-26 Score=221.40 Aligned_cols=201 Identities=13% Similarity=0.086 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCC
Q 014219 156 SQRQATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNT 235 (428)
Q Consensus 156 ~~~~~l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~ 235 (428)
...+.+.+|++.||+....++.||.|++++++..... ...++++|+||||||++++. ++.+. +....
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~--------~~gv~vvDiGggttdisi~~--~g~~~---~~~~i 234 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEK--------DRGVVVVNLGYNFTGLIAYK--NGVPI---KISYV 234 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHH--------HHCEEEEEECSSSEEEEEEE--TTEEE---EEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccccc--------cCCEEEEEECCCcEEEEEEE--CCEEE---EEEec
Confidence 3567899999999999999999999999998765443 56799999999999999998 55544 33458
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccC-----CceeEEEeecccCcceeEEeeHHH
Q 014219 236 RLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSST-----IQTSIEIDYLYEGINFSSTITRAR 310 (428)
Q Consensus 236 ~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~-----~~~~~~~~~~~~~~~~~~~i~~~~ 310 (428)
++||++||+.|...+.- . ..+||++|..++.. ....+.++... ......+++++
T Consensus 235 ~~GG~~it~dIa~~l~~------~-------------~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~ 293 (419)
T 4a2a_A 235 PVGMKHVIKDVSAVLDT------S-------------FEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKK 293 (419)
T ss_dssp SCCHHHHHHHHHHHHTC------C-------------HHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHH
T ss_pred ccHHHHHHHHHHHHHCC------C-------------HHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHH
Confidence 99999999999876521 1 58999999998743 23445555432 34568999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCC------CCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCC-------------
Q 014219 311 FEQLNMDLFEKCIEHVDTCLAKAKID------RTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRH------------- 371 (428)
Q Consensus 311 ~~~~~~~~i~~i~~~i~~~l~~~~~~------~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~------------- 371 (428)
+.++++|.++++.+.+.+.|+..+.+ ...++.|+|+||+|++|++++.+++.| +.+++..
T Consensus 294 l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~ 372 (419)
T 4a2a_A 294 LSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINA 372 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCc
Confidence 99999999999999999999998862 345789999999999999999999999 5554322
Q ss_pred ----CChhhHHHhHHHHHHHHhcC
Q 014219 372 ----INADEAVATGAAIQAAILSG 391 (428)
Q Consensus 372 ----~~p~~ava~Ga~~~~~~~~~ 391 (428)
.+|.++.|.|+++++....+
T Consensus 373 ~~~~~~P~~~t~~Gl~~~~~~~~~ 396 (419)
T 4a2a_A 373 DEVANDPSFAAAFGNVFAVSENPY 396 (419)
T ss_dssp HHHHTCGGGHHHHHTTCC------
T ss_pred ccccCCchHHHHHHHHHHHhhccc
Confidence 48999999999999876543
No 13
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.95 E-value=4.5e-28 Score=233.23 Aligned_cols=315 Identities=20% Similarity=0.226 Sum_probs=206.3
Q ss_pred CCCCCceEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEeCC------------------ceEecHhhhhhhh
Q 014219 1 MAGKAGVAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTDT------------------ESFVGDSAKNQVS 62 (428)
Q Consensus 1 m~~~~~~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~~~------------------~~~~G~~a~~~~~ 62 (428)
|+. +...|+||+||++++++++.++.+..+ +||+++.... ..++|++|....
T Consensus 1 m~~-~~~~ivID~Gs~~~k~G~~~~~~p~~~--------~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~- 70 (418)
T 1k8k_A 1 MAG-RLPACVVDCGTGYTKLGYAGNTEPQFI--------IPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP- 70 (418)
T ss_dssp --C-CSCCEEEEECSSEEEEEETTCSSCSEE--------EESCEEECC-----------CCCTTGGGCEEEGGGGTSCT-
T ss_pred CCC-CCCeEEEECCCCeEEEeeCCCCCCCCc--------CCceEEEECcccccccccccccccccccCeEEChHHHhcC-
Confidence 654 467899999999999999866555433 6777776432 256677665320
Q ss_pred hCCCcchhhhhhhcCCCCCChhhhhhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcC--C
Q 014219 63 TNPTNTVFDAKRLIGRRFSDVSVQSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVG--T 140 (428)
Q Consensus 63 ~~~~~~~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~--~ 140 (428)
. ..+..++.+ +++ ...+....+++++.. +.++ .
T Consensus 71 ---~----------------~~~~~pi~~---G~i--------------------~d~d~~e~i~~~~~~---~~L~~~~ 105 (418)
T 1k8k_A 71 ---T----------------YATKWPIRH---GIV--------------------EDWDLMERFMEQVIF---KYLRAEP 105 (418)
T ss_dssp ---T----------------SEEECCEET---TEE--------------------SCHHHHHHHHHHHHH---TTTCCCG
T ss_pred ---C----------------CEEeccccC---CEE--------------------CCHHHHHHHHHHHHH---hccCCCC
Confidence 0 001111111 111 112233344444442 2233 2
Q ss_pred ccCeEEEEeCCCCCHHHHHHHHHHH-HHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEE
Q 014219 141 AVTNAVITVPAYFSDSQRQATEDAA-TQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLL 219 (428)
Q Consensus 141 ~~~~~vitvP~~~~~~~~~~l~~a~-~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~ 219 (428)
....+++|+|+.++..+|+.+.+++ +.+|++.+.++.||.||+++...... ...... ..+|||+|+||||++++
T Consensus 106 ~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~----~~~~~~-~glVvDiG~gtt~v~~v 180 (418)
T 1k8k_A 106 EDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQ----VGERTL-TGTVIDSGDGVTHVIPV 180 (418)
T ss_dssp GGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTT----CCSCCC-CEEEEEESSSCEEEEEE
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccc----cCCCCC-eEEEEEcCCCceEEEEe
Confidence 2458999999999999999999988 88899999999999999987332110 000112 56999999999999998
Q ss_pred EEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCC------------
Q 014219 220 AIENGVIRVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTI------------ 287 (428)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~------------ 287 (428)
. ++.. +........+||+++|+.|.+++..+.. . .... .-...+|++|+.++...
T Consensus 181 ~--~G~~-~~~~~~~~~lGG~~lt~~l~~~l~~~~~---~--~~~~-----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~ 247 (418)
T 1k8k_A 181 A--EGYV-IGSCIKHIPIAGRDITYFIQQLLRDREV---G--IPPE-----QSLETAKAVKERYSYVCPDLVKEFNKYDT 247 (418)
T ss_dssp E--TTEE-CGGGCEEESCSHHHHHHHHHHHHHTTCC---C--CCGG-----GHHHHHHHHHHHHCCCCSCHHHHHHHHHH
T ss_pred E--CCEE-cccceEEEeCcHHHHHHHHHHHHHhcCC---C--CCCH-----HHHHHHHHHHHhhchhcccHHHHHHhhcc
Confidence 6 4432 1111244799999999999999965421 1 1100 01356788888875332
Q ss_pred -----ceeEEEeecccCcceeEEeeHHHH---HHHHHHHH------HHHHHHHHHHHHHcCCCC--CCCCeEEEEcCCcC
Q 014219 288 -----QTSIEIDYLYEGINFSSTITRARF---EQLNMDLF------EKCIEHVDTCLAKAKIDR--TAVDDVVIVGGSSR 351 (428)
Q Consensus 288 -----~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~i------~~i~~~i~~~l~~~~~~~--~~i~~Vvl~GG~s~ 351 (428)
...+.++....+....+.+++++| |.+|.|.+ ..|.+.+.+.++++..+. ..++.|+|+||+|+
T Consensus 248 ~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~ 327 (418)
T 1k8k_A 248 DGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTM 327 (418)
T ss_dssp SGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGC
T ss_pred cccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccc
Confidence 123455543444556788999988 55555542 568889999999875432 23578999999999
Q ss_pred cHHHHHHHHhhcC-----------------------CCCcCCCCChhhHHHhHHHHHHHH
Q 014219 352 IPKLQQLLQDFFL-----------------------GKNLCRHINADEAVATGAAIQAAI 388 (428)
Q Consensus 352 ~~~l~~~l~~~~~-----------------------~~~v~~~~~p~~ava~Ga~~~~~~ 388 (428)
+|+++++|++.+. ..++..+++|.++++.|++++|..
T Consensus 328 ~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 328 FRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred cccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 9999999887652 124556778999999999999864
No 14
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=9.2e-28 Score=224.11 Aligned_cols=206 Identities=16% Similarity=0.115 Sum_probs=152.4
Q ss_pred CeEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CceEeeechhHHHHHHhhccccccCCccccCceEEEE
Q 014219 143 TNAV--ITVPAYFSDSQRQATEDAATQC--------G------LQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLI 206 (428)
Q Consensus 143 ~~~v--itvP~~~~~~~~~~l~~a~~~a--------g------~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lv 206 (428)
.+++ +++|++++..+|+++++++..+ | +..+.+++||.||+++++..... ..+...++|
T Consensus 120 ~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~l~~~~~-----~~~~~~vlV 194 (346)
T 2fsj_A 120 VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLLNQGII-----EQQPGYGVV 194 (346)
T ss_dssp EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHHHHHTSS-----CCCSSEEEE
T ss_pred eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHhhccccc-----cccCCcEEE
Confidence 5789 9999999999999999998775 4 36688999999999988321100 012467899
Q ss_pred EEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccC
Q 014219 207 FDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSST 286 (428)
Q Consensus 207 vDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~ 286 (428)
+|+||||||+++++..++. .+....++..+||+++++.+.+++..+++... .+ . ...+|
T Consensus 195 vDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~~~--~i----~-----~~~~e--------- 253 (346)
T 2fsj_A 195 IDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKETGFVV--PF----D-----LAQEA--------- 253 (346)
T ss_dssp EEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHCCCC--CH----H-----HHHHH---------
T ss_pred EECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhCCCc--CC----C-----HHHHh---------
Confidence 9999999999999976665 33333466789999999999998877653200 10 0 11222
Q ss_pred CceeEEEeecccCcceeEEeeHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCC
Q 014219 287 IQTSIEIDYLYEGINFSSTITRARF-EQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLG 365 (428)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~ 365 (428)
....+.+ .|. .++++++ ++++++++++|.+.+++.++.. ...++.|+|+||+|++ +++.+++.|+.
T Consensus 254 ~~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~ 320 (346)
T 2fsj_A 254 LSHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPG 320 (346)
T ss_dssp TTSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEEEESTTHHH--HGGGGGGGSTT
T ss_pred cCCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEEEECCcHHH--HHHHHHHHCcC
Confidence 1112222 232 3558999 9999999999999999999875 2356899999999998 99999999953
Q ss_pred CCc-CCCCChhhHHHhHHHHHHH
Q 014219 366 KNL-CRHINADEAVATGAAIQAA 387 (428)
Q Consensus 366 ~~v-~~~~~p~~ava~Ga~~~~~ 387 (428)
..+ ....||.+|+|.|+..++.
T Consensus 321 ~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 321 TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEeccCCCcHHHHHHHHHHHHh
Confidence 322 2278999999999998764
No 15
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.94 E-value=7.6e-27 Score=221.07 Aligned_cols=299 Identities=17% Similarity=0.191 Sum_probs=197.2
Q ss_pred CceEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEeC----------CceEecHhhhhhhhhCCCcchhhhhh
Q 014219 5 AGVAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTD----------TESFVGDSAKNQVSTNPTNTVFDAKR 74 (428)
Q Consensus 5 ~~~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~~----------~~~~~G~~a~~~~~~~~~~~~~~~k~ 74 (428)
....|+||+||++++++++.++.+..+ +||+++... +..++|++|.... .
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~--------~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~-------- 63 (375)
T 2fxu_A 4 ETTALVCDNGSGLVKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----G-------- 63 (375)
T ss_dssp CCCCEEEEECSSEEEEEETTCSSCSEE--------EECCEEEECTTTC-------CCEEHHHHHHHT----T--------
T ss_pred CCceEEEECCCCeEEEEECCCCCCcee--------eccccccccccccccCCCCCCeEechhHhhcC----c--------
Confidence 356799999999999999866655433 566666532 3457888886431 0
Q ss_pred hcCCCCCChhhhhhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcCC--ccCeEEEEeCCC
Q 014219 75 LIGRRFSDVSVQSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGT--AVTNAVITVPAY 152 (428)
Q Consensus 75 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~--~~~~~vitvP~~ 152 (428)
...+..++.+ +++ ...+....+++++.. +.++. ....+++|+|+.
T Consensus 64 -------~~~~~~Pi~~---G~i--------------------~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~ 110 (375)
T 2fxu_A 64 -------ILTLKYPIEH---GII--------------------TNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPL 110 (375)
T ss_dssp -------SEEEECSEET---TEE--------------------CCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTT
T ss_pred -------ccceeccccC---Ccc--------------------cCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCC
Confidence 0001111111 111 122234444544442 22332 234699999999
Q ss_pred CCHHHHHHHHHH-HHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEe
Q 014219 153 FSDSQRQATEDA-ATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRAT 231 (428)
Q Consensus 153 ~~~~~~~~l~~a-~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~ 231 (428)
++..+|+.+.++ ++.+|++.+.++.||.||+++++. .+.+|||+|+|||+++.+. ++.. +...
T Consensus 111 ~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~-------------~~~lVvDiG~gtt~v~~v~--~G~~-~~~~ 174 (375)
T 2fxu_A 111 NPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR-------------TTGIVLDSGDGVTHNVPIY--EGYA-LPHA 174 (375)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC-------------SSEEEEEECSSCEEEEEEE--TTEE-CGGG
T ss_pred CcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC-------------CeEEEEEcCCCceEEeEeE--CCEE-eccc
Confidence 999999988875 577899999999999999999874 2369999999999998775 5532 1111
Q ss_pred cCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccC----------------CceeEEEee
Q 014219 232 DGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSST----------------IQTSIEIDY 295 (428)
Q Consensus 232 ~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~----------------~~~~~~~~~ 295 (428)
.....+||+++|+.|.+++..+. +. ... . .-...+|++|+.+... ....+.++
T Consensus 175 ~~~~~~GG~~lt~~l~~~l~~~~---~~--~~~-~----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp- 243 (375)
T 2fxu_A 175 IMRLDLAGRDLTDYLMKILTERG---YS--FVT-T----AEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP- 243 (375)
T ss_dssp CEEESCCHHHHHHHHHHHHHHHT---CC--CCS-H----HHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT-
T ss_pred eEEeccCHHHHHHHHHHHHHhcC---CC--CCc-H----HHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC-
Confidence 23479999999999999997651 11 110 0 0124566666665322 12223332
Q ss_pred cccCcceeEEeeHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCCC--CCCCeEEEEcCCcCcHHHHHHHHhhcC-
Q 014219 296 LYEGINFSSTITRARF---EQLNMDL-----FEKCIEHVDTCLAKAKIDR--TAVDDVVIVGGSSRIPKLQQLLQDFFL- 364 (428)
Q Consensus 296 ~~~~~~~~~~i~~~~~---~~~~~~~-----i~~i~~~i~~~l~~~~~~~--~~i~~Vvl~GG~s~~~~l~~~l~~~~~- 364 (428)
+| ..+.++++.| +.+|+|. ...|.+.+.+.++++..+. ...+.|+|+||+|++|+++++|++.+.
T Consensus 244 --dg--~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~ 319 (375)
T 2fxu_A 244 --DG--QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITA 319 (375)
T ss_dssp --TS--CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHH
T ss_pred --CC--CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHH
Confidence 33 3467777766 3445553 3567788888888764221 234789999999999999999999883
Q ss_pred ------CCCcCCCCChhhHHHhHHHHHHH
Q 014219 365 ------GKNLCRHINADEAVATGAAIQAA 387 (428)
Q Consensus 365 ------~~~v~~~~~p~~ava~Ga~~~~~ 387 (428)
..++..+.+|.++++.|+++++.
T Consensus 320 ~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 320 LAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred hCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 14566788999999999999997
No 16
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.94 E-value=4.6e-27 Score=223.46 Aligned_cols=322 Identities=17% Similarity=0.202 Sum_probs=200.9
Q ss_pred CceEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEeCCceEecHhhhhhhhhCCCcchhhhhhhcCCCCCChh
Q 014219 5 AGVAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTDTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSDVS 84 (428)
Q Consensus 5 ~~~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~~~~~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~~~~~ 84 (428)
+..++|||+||++++++..+++.+.+. ..|...+|+. ........+++.+...+|+++++...
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~------------~~~~g~i~d~~~~~~~ik~~~~~~~~--- 74 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPG------------LLMEGMVAEPAALAQEIKELLLEART--- 74 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTT------------SEETTEESCHHHHHHHHHHHHHHHTC---
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCC------------cccCCCcCCHHHHHHHHHHHHHHcCC---
Confidence 467999999999999998876654332 1233334542 12333345667777778887754100
Q ss_pred hhhhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcCCccCeEEEEeCCCCCH---------
Q 014219 85 VQSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSD--------- 155 (428)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~~~~vitvP~~~~~--------- 155 (428)
..+. -...-+. .......... ..++.+++-.. +...+.+++..+..+.++.+|..=..
T Consensus 75 ---~~~~---v~~~i~~-~~~~~~~~~~--~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~ 141 (377)
T 2ych_A 75 ---RKRY---VVTALSN-LAVILRPIQV--PKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQV 141 (377)
T ss_dssp ---CCCE---EEEEECG-GGCEEEEEEE--ECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTSEE
T ss_pred ---Ccce---EEEEecC-CcEEEEEEEC--CCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEEeCCCCCCCCccee
Confidence 0111 1111111 1111111111 23566665432 23456677777888888888732211
Q ss_pred ---------HHHHHHHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeE
Q 014219 156 ---------SQRQATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVI 226 (428)
Q Consensus 156 ---------~~~~~l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~ 226 (428)
...+.+.++++.||++...++.||.|++.++...... .....++|+|+||||||+++++ .+.+
T Consensus 142 ~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~------~~~~~~~vvDiGggttdi~i~~--~g~~ 213 (377)
T 2ych_A 142 QVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAE------EPDRVFLVLDIGAESTSLVLLR--GDKP 213 (377)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHT------STTCEEEEEEECSSCEEEEEEE--TTEE
T ss_pred EEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccc------ccCCeEEEEEECCCcEEEEEEE--CCEE
Confidence 1247899999999999999999999999987543221 1256789999999999999997 4443
Q ss_pred EEEEecCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeecccCcceeEEe
Q 014219 227 RVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEGINFSSTI 306 (428)
Q Consensus 227 ~~~~~~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~~~~~~~~i 306 (428)
. ..+...+||+++|+.+.+.+ +.+ ..+||++|+.++.............+-......+
T Consensus 214 ~---~~~~~~~GG~~i~~~i~~~~--------~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i 271 (377)
T 2ych_A 214 L---AVRVLTLSGKDFTEAIARSF--------NLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERY 271 (377)
T ss_dssp E---EEEEESCSHHHHHHHHHHHT--------TCC-----------HHHHHHHHHHTC----------------------
T ss_pred E---EEEeeechHHHHHHHHHHHh--------CCC-----------HHHHHHHHhhcccccccccccccccccccccccC
Confidence 2 33458999999999997733 111 4789999999875432111000000001134578
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCC--------------
Q 014219 307 TRARFEQLNMDLFEKCIEHVDTCLAKA--KIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCR-------------- 370 (428)
Q Consensus 307 ~~~~~~~~~~~~i~~i~~~i~~~l~~~--~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~-------------- 370 (428)
+++++++++++.++++...+.+.++.. +.....++.|+|+||+|++|++++.+++.| +.++..
T Consensus 272 ~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l-~~~v~~~~P~~~v~~~~~~~ 350 (377)
T 2ych_A 272 SPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTL-GVNLEPVNPWEAVAVDPKRF 350 (377)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHH-TSEEEECCGGGGSBCCTTTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHh-CCCeEecCchhhcccCcccC
Confidence 899999999999999999999999853 333456899999999999999999999999 443321
Q ss_pred ------CCChhhHHHhHHHHHHH
Q 014219 371 ------HINADEAVATGAAIQAA 387 (428)
Q Consensus 371 ------~~~p~~ava~Ga~~~~~ 387 (428)
..+|.+++|.|+++++.
T Consensus 351 ~~~~l~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 351 ESEQLQEIGPEFAVALGLALRGV 373 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHhhhHHHHHHHHHHHcCC
Confidence 23567889999999873
No 17
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.91 E-value=1.4e-23 Score=194.39 Aligned_cols=204 Identities=15% Similarity=0.210 Sum_probs=136.3
Q ss_pred CeEEEEeCCC-CCHH--H--HHHHHHHH------------HHcCCceEeeechhHHHHHHhhccccccCCccccCceEEE
Q 014219 143 TNAVITVPAY-FSDS--Q--RQATEDAA------------TQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVL 205 (428)
Q Consensus 143 ~~~vitvP~~-~~~~--~--~~~l~~a~------------~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~l 205 (428)
..+++++|.. |... + ++.+.+-. +.+++..+.+++||.||++++..... +...++
T Consensus 96 ~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~~~~~--------~~~~~~ 167 (320)
T 2zgy_A 96 VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQELD--------ELDSLL 167 (320)
T ss_dssp EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHHHHSC--------TTCEEE
T ss_pred EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhhcccc--------CCCCEE
Confidence 4799999987 5431 1 12222221 23345789999999999998874332 267899
Q ss_pred EEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHH-HHHhc
Q 014219 206 IFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESA-KRTLS 284 (428)
Q Consensus 206 vvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~-K~~l~ 284 (428)
|+|+||||||+++++ ++...+....++..+||+++|+.+.+++..+ +..+ + ...+|++ |..-
T Consensus 168 vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~i--~-------~~~ae~~lk~~~- 230 (320)
T 2zgy_A 168 IIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTKG--S-------SYLADDIIIHRK- 230 (320)
T ss_dssp EEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBGG--G-------HHHHHHHHHTTT-
T ss_pred EEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCCC--C-------HHHHHHHHHHhh-
Confidence 999999999999998 4443333345557999999999999888532 1111 1 1345554 3320
Q ss_pred cCCceeEEEeecccCcceeEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcC
Q 014219 285 STIQTSIEIDYLYEGINFSSTITRARFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFL 364 (428)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~ 364 (428)
.. ..........-..+++.+++++.++++.+.+.+.+++. .+++.|+|+||+|++ +++.+++.|+
T Consensus 231 --~~-------~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~vvl~GGga~l--l~~~l~~~~~ 295 (320)
T 2zgy_A 231 --DN-------NYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHVMVIGGGAEL--ICDAVKKHTQ 295 (320)
T ss_dssp --CH-------HHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEEEEESTTHHH--HHHHHHHTSC
T ss_pred --hh-------hcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeEEEECChHHH--HHHHHHHHhC
Confidence 00 00000000011235666777777777777777777652 457899999999986 9999999994
Q ss_pred CC--CcCCCCChhhHHHhHHHHHH
Q 014219 365 GK--NLCRHINADEAVATGAAIQA 386 (428)
Q Consensus 365 ~~--~v~~~~~p~~ava~Ga~~~~ 386 (428)
.. ++..+.||++|+|.||++++
T Consensus 296 ~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 296 IRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCCCceeeCCCcHHHHHHHHHHhc
Confidence 32 57889999999999999876
No 18
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.88 E-value=2.3e-24 Score=205.08 Aligned_cols=215 Identities=17% Similarity=0.169 Sum_probs=91.9
Q ss_pred CeEEEEeCCCCCHHHHHHHHH-HHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEE
Q 014219 143 TNAVITVPAYFSDSQRQATED-AATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAI 221 (428)
Q Consensus 143 ~~~vitvP~~~~~~~~~~l~~-a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~ 221 (428)
..+++|+|+..+..+|+.+.+ +++.+|++.+.++.||.||+++++. ...+|||+|+|+|+++.+.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-------------~~~lVVDiG~g~T~v~pv~- 170 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-------------LTGVVVDSGDGVTHICPVY- 170 (394)
T ss_dssp --------------------------------------------------------------CCEEEECSSCEEEECEE-
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-------------ceEEEEEcCCCceEeeeeE-
Confidence 468999999999999998888 5578899999999999999998764 2359999999999998776
Q ss_pred eCCeEEEEEecCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCC--------------
Q 014219 222 ENGVIRVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTI-------------- 287 (428)
Q Consensus 222 ~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~-------------- 287 (428)
++.... .......+||+++|+.|.+++..+. +....... ...+|++|+.+....
T Consensus 171 -~G~~~~-~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~ 238 (394)
T 1k8k_B 171 -EGFSLP-HLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETT 238 (394)
T ss_dssp -TTEECS-TTCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCS
T ss_pred -CCEEcc-cceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCC
Confidence 443211 0112368999999999999996541 11111111 355677777664321
Q ss_pred --ceeEEEeecccCcceeEEeeHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCCC--CCCCeEEEEcCCcCcHHH
Q 014219 288 --QTSIEIDYLYEGINFSSTITRARFE---QLNMDL-----FEKCIEHVDTCLAKAKIDR--TAVDDVVIVGGSSRIPKL 355 (428)
Q Consensus 288 --~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~-----i~~i~~~i~~~l~~~~~~~--~~i~~Vvl~GG~s~~~~l 355 (428)
...+.+ .+| ..+.++.+.|. .+|+|. ...|.+.+.+.+.++..+. ...+.|+|+||+|.+|++
T Consensus 239 ~~~~~~~l---pdg--~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~ 313 (394)
T 1k8k_B 239 VLVESYTL---PDG--RIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGL 313 (394)
T ss_dssp TTCEEEEC---TTS--CEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTH
T ss_pred cCceEEEC---CCC--CEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccH
Confidence 111222 233 24667777662 334442 3457788888888875432 224789999999999999
Q ss_pred HHHHHhhcCC------------------CCcCCCCChhhHHHhHHHHHHHH
Q 014219 356 QQLLQDFFLG------------------KNLCRHINADEAVATGAAIQAAI 388 (428)
Q Consensus 356 ~~~l~~~~~~------------------~~v~~~~~p~~ava~Ga~~~~~~ 388 (428)
.++|++.+.. .++..+++|..+++.|+++++..
T Consensus 314 ~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 314 PSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 9999987731 23445778999999999999974
No 19
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.84 E-value=4.8e-20 Score=171.82 Aligned_cols=211 Identities=15% Similarity=0.207 Sum_probs=135.4
Q ss_pred CeEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceEeeechhHHHHHHhhccccccCCccccCceEEEEEEe
Q 014219 143 TNAVITVPAYFSDSQR-QATEDAATQCGL------------QVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDL 209 (428)
Q Consensus 143 ~~~vitvP~~~~~~~~-~~l~~a~~~ag~------------~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDi 209 (428)
..+++++|..+...++ +.+++++...+- ..+.+++||.||++++....... ...-....++|||+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~--~~~~~~~~~~vvDi 191 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKV--FKAFTEGKYSVLDF 191 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEE--CHHHHTCEEEEEEE
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCcc--ccccccCcEEEEEe
Confidence 4799999998877776 588888875542 57899999999999987654210 00003778999999
Q ss_pred cCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCce
Q 014219 210 GGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQT 289 (428)
Q Consensus 210 G~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~ 289 (428)
|+||||++++. ++.+. .....+...|+..+++.+.+++.+++. +..+. . ...++. ..
T Consensus 192 GggTtd~~v~~--~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g-------~~- 248 (355)
T 3js6_A 192 GSGTTIIDTYQ--NMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKG-------LE- 248 (355)
T ss_dssp CSSCEEEEEEE--TTEEC-GGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSC-------CC-
T ss_pred CCCcEEEEEEc--CCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcC-------Cc-
Confidence 99999999993 54421 011234789999999999999976532 11111 1 111111 00
Q ss_pred eEEEeecccCcceeEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHH--HHHHHHhhcCCCC
Q 014219 290 SIEIDYLYEGINFSSTITRARFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPK--LQQLLQDFFLGKN 367 (428)
Q Consensus 290 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~--l~~~l~~~~~~~~ 367 (428)
+... ..+....+.+ .+.+++++++.+++|.+.+++.+.. ...++.|+|+||+|.++. |.+.+++.||..
T Consensus 249 -~~~~--~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~- 319 (355)
T 3js6_A 249 -YKQC--KLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA- 319 (355)
T ss_dssp ----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-
T ss_pred -cccc--cccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-
Confidence 0000 0000011122 1345555666666666666665543 345789999999999888 888999888432
Q ss_pred cCCCCChhhHHHhHHHHHHHHhcC
Q 014219 368 LCRHINADEAVATGAAIQAAILSG 391 (428)
Q Consensus 368 v~~~~~p~~ava~Ga~~~~~~~~~ 391 (428)
.||..|+|+|+..++..+.+
T Consensus 320 ----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ----SSGGGHHHHHHHHHHHHHHH
T ss_pred ----CCcHHHHHHHHHHHHHHHHh
Confidence 89999999999999988754
No 20
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.83 E-value=2.1e-21 Score=185.03 Aligned_cols=226 Identities=17% Similarity=0.144 Sum_probs=149.5
Q ss_pred cCeEEEEeCCCCCHHHHHHHHHHH-HHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEE
Q 014219 142 VTNAVITVPAYFSDSQRQATEDAA-TQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLA 220 (428)
Q Consensus 142 ~~~~vitvP~~~~~~~~~~l~~a~-~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~ 220 (428)
...+++|.|...+...|+.+.+++ +..|++.+.++.+|.+++++.+..... .....+-+|||+|+|+|+++.+.
T Consensus 123 ~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~-----~~~~~tglVVDiG~g~T~v~PV~ 197 (427)
T 3dwl_A 123 DHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKV-----TDRSLTGTVVDSGDGVTHIIPVA 197 (427)
T ss_dssp GCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTT-----CSCCCCEEEEEESSSCEEEEEEE
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccc-----cCCCceEEEEECCCCceEEEEEE
Confidence 358999999999999999998866 789999999999999999988743210 00123469999999999999885
Q ss_pred EeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCce---eE------
Q 014219 221 IENGVIRVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQT---SI------ 291 (428)
Q Consensus 221 ~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~---~~------ 291 (428)
++..-.- ......+||+++|+.|.+++..+...... ...+|++|+++...... ++
T Consensus 198 --~G~~l~~-~~~rl~~gG~~lt~~L~~lL~~~~~~~~~-------------~~~~~~IKe~~cyv~~d~~~e~~~~~~~ 261 (427)
T 3dwl_A 198 --EGYVIGS-SIKTMPLAGRDVTYFVQSLLRDRNEPDSS-------------LKTAERIKEECCYVCPDIVKEFSRFDRE 261 (427)
T ss_dssp --TTEECGG-GCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-
T ss_pred --CCEEehh-hheeccccHHHHHHHHHHHHHHcCCCchh-------------HHHHHHHHHhcCcccCCHHHHHHHhhcC
Confidence 4432110 11226899999999999998765432111 26677788876532210 00
Q ss_pred --EEe-e-c--ccCcceeEEeeHHHHH---HHHHHH------HHHHHHHHHHHHHHcCCCC--CCCCeEEEEcCCcCcHH
Q 014219 292 --EID-Y-L--YEGINFSSTITRARFE---QLNMDL------FEKCIEHVDTCLAKAKIDR--TAVDDVVIVGGSSRIPK 354 (428)
Q Consensus 292 --~~~-~-~--~~~~~~~~~i~~~~~~---~~~~~~------i~~i~~~i~~~l~~~~~~~--~~i~~Vvl~GG~s~~~~ 354 (428)
.+. . + .+|....+.++.+.|. -+|.|- ...|.+.+.+.++++..+. .-..+|+|+||++.+|+
T Consensus 262 ~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G 341 (427)
T 3dwl_A 262 PDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKN 341 (427)
T ss_dssp ----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTT
T ss_pred ccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCC
Confidence 000 0 1 2344446677777653 344552 2458888888888765332 11357999999999999
Q ss_pred HHHHHHhhc------------------C---CCCcCCCCChhhHHHhHHHHHHHH
Q 014219 355 LQQLLQDFF------------------L---GKNLCRHINADEAVATGAAIQAAI 388 (428)
Q Consensus 355 l~~~l~~~~------------------~---~~~v~~~~~p~~ava~Ga~~~~~~ 388 (428)
+.++|++.+ + ..+|..++++.+++..|+++++..
T Consensus 342 ~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl 396 (427)
T 3dwl_A 342 FGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQT 396 (427)
T ss_dssp TTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccc
Confidence 999998866 1 134566778899999999999863
No 21
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.81 E-value=1.1e-20 Score=174.92 Aligned_cols=204 Identities=17% Similarity=0.191 Sum_probs=140.2
Q ss_pred cCeEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceEeeechhHHHHHHhhccccccCCccccCceEEE
Q 014219 142 VTNAVITVPAYFSD--SQRQATEDAATQC--------G------LQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVL 205 (428)
Q Consensus 142 ~~~~vitvP~~~~~--~~~~~l~~a~~~a--------g------~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~l 205 (428)
...+++++|..+-. .+++.+++.+... | +..+.+++|+.++.+.... . .+...++
T Consensus 105 ~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~~-~--------~~~~~v~ 175 (329)
T 4apw_A 105 KVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQE-N--------FKNKNVA 175 (329)
T ss_dssp EEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSCC-C--------CTTCEEE
T ss_pred eEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcch-h--------hccCCEE
Confidence 35799999987654 3577787777632 1 2568899999999887531 1 1367899
Q ss_pred EEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHH-HHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhc
Q 014219 206 IFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFVE-EFKRKNKIDISGNARALHRLRIACESAKRTLS 284 (428)
Q Consensus 206 vvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~ 284 (428)
|||+|+||||++++. ++.+ ......+..+||+++++.+.+.+.. +++.. +.. ..+|++|.. .
T Consensus 176 vvDiGggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~~----i~~---------~~~e~i~~~-g 238 (329)
T 4apw_A 176 VIDFGGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTDLNNGNL----ITN---------EQAESALNN-G 238 (329)
T ss_dssp EEEECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSSCSSCSC----TTS---------BTTTTCSSS-C
T ss_pred EEEeCCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHhhccCCC----CCH---------HHHHHHHhc-C
Confidence 999999999999998 4443 1112235789999999999888855 33221 111 223333322 1
Q ss_pred cCCceeEEEeecccCcceeEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcC
Q 014219 285 STIQTSIEIDYLYEGINFSSTITRARFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFL 364 (428)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~ 364 (428)
. . ..+.+. ..+..+++++++++.+++|.+.+++. + .++..++.|+|+||+|.+ +.+.+++.|
T Consensus 239 ~---~-------~~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~-~---~~~~~~~~IvltGGGA~l--~~~~l~~~~- 300 (329)
T 4apw_A 239 Y---M-------KKGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR-G---FKLDQLDSLIFIGGTTQK--LKEQISKTY- 300 (329)
T ss_dssp S---S-------CEECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH-T---CCTTSCSEEEEESTTHHH--HHHHHHHHS-
T ss_pred C---c-------ccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc-C---CCHHHccEEEEECChHHH--HHHHHHHHc-
Confidence 0 0 001111 13456777888888888777777766 2 333447899999999987 679999999
Q ss_pred CCCcCCCCChhhHHHhHHHHHHHHh
Q 014219 365 GKNLCRHINADEAVATGAAIQAAIL 389 (428)
Q Consensus 365 ~~~v~~~~~p~~ava~Ga~~~~~~~ 389 (428)
+.++...+||..|+|+|+..++...
T Consensus 301 ~~~v~v~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 301 PNNSIITNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp TTCEECCSSGGGHHHHHHHHHHHHH
T ss_pred CCCCEecCCChhhHHHHHHHHHhhh
Confidence 5567889999999999999988664
No 22
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.77 E-value=2.6e-18 Score=165.21 Aligned_cols=309 Identities=18% Similarity=0.176 Sum_probs=192.0
Q ss_pred ceEEEEeccCceEEEEEEeCCeeEEEecCCCCcccceEEEEeC----CceEecHhhhhhhhhCCCcchhhhhhhcCCCCC
Q 014219 6 GVAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTD----TESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFS 81 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~~~~~~i~~~~g~~~~pt~i~~~~----~~~~~G~~a~~~~~~~~~~~~~~~k~~l~~~~~ 81 (428)
...|+||+||.++++++..++.+..+ +||+|+... +..++|+++.... + .
T Consensus 23 ~~~iVID~GS~~~kaG~ag~~~P~~v--------~PSvVg~~~~~~~~~~~vG~e~~~~~---r---------------~ 76 (498)
T 3qb0_A 23 VSAVVIDPGSYTTNIGYSGSDFPQSI--------LPSVYGKYTADEGNKKIFSEQSIGIP---R---------------K 76 (498)
T ss_dssp BSCEEEECCSSEEEEEETTCSSCSEE--------EESEEEEESSCSSCCEECCTTGGGSC---C---------------T
T ss_pred CCeEEEECCCcEEEEEECCCCCeeee--------cCceeEEeccCCCccEEEecHHHhcC---c---------------C
Confidence 45799999999999999976655444 799999853 3467888643110 0 1
Q ss_pred ChhhhhhcccCCeeEEECCCCCceEEEEECCeEEEEeHHHHHHHHHHHHHHHHHHHcC--CccC-eEEEEeCCCCCHHHH
Q 014219 82 DVSVQSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVG--TAVT-NAVITVPAYFSDSQR 158 (428)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~--~~~~-~~vitvP~~~~~~~~ 158 (428)
...+..++++ ++ +...+....+++|+... .++ .... .+++|.|...+...|
T Consensus 77 ~l~l~~Pi~~---Gv--------------------I~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~R 130 (498)
T 3qb0_A 77 DYELKPIIEN---GL--------------------VIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENR 130 (498)
T ss_dssp TEEEEESEET---TE--------------------ESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHH
T ss_pred ceEEeccCcC---CE--------------------EccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHH
Confidence 1111111111 12 22334445555555432 222 2223 689999999999999
Q ss_pred HHHHHH-HHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCc
Q 014219 159 QATEDA-ATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRL 237 (428)
Q Consensus 159 ~~l~~a-~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~ 237 (428)
+.|.++ ++..|++.+.++.+|.+++++++.. .-+|||+|+|+|+++.+. ++..-. .......+
T Consensus 131 e~~~eilFE~f~vpav~l~~~~vlalya~G~~-------------tglVVDiG~g~T~vvPI~--~G~~l~-~ai~rl~v 194 (498)
T 3qb0_A 131 KKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP-------------NCLVVDIGHDTCSVSPIV--DGMTLS-KSTRRNFI 194 (498)
T ss_dssp HHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS-------------SEEEEEECSSCEEEEEEE--TTEECG-GGCEEESC
T ss_pred HHHHHHHHhhcCCCeEeecchHHHHHHHcCCC-------------eEEEEEcCCCcEEEEEEe--CCEEcc-ccceeccc
Confidence 999885 5789999999999999999988742 149999999999999886 443210 01122689
Q ss_pred chHHHHHHHHHHHHHHH-------Hhh------hCCCCCCCH--HHHHHHHHHHHHHHHHhccCCc--------------
Q 014219 238 GGVDFNNRMVDYFVEEF-------KRK------NKIDISGNA--RALHRLRIACESAKRTLSSTIQ-------------- 288 (428)
Q Consensus 238 Gg~~id~~l~~~l~~~~-------~~~------~~~~~~~~~--~~~~~l~~~~e~~K~~l~~~~~-------------- 288 (428)
||+++|+.|.++|..+- ..+ .+....... ..+..-...++++|+.+.....
T Consensus 195 gG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~~~~~ 274 (498)
T 3qb0_A 195 AGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSST 274 (498)
T ss_dssp SHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhhccCc
Confidence 99999999999985420 000 001111111 1111122356778887652211
Q ss_pred --eeEEEeecccCcceeEEeeHH-HHH---HHHHHH--------------------------------------------
Q 014219 289 --TSIEIDYLYEGINFSSTITRA-RFE---QLNMDL-------------------------------------------- 318 (428)
Q Consensus 289 --~~~~~~~~~~~~~~~~~i~~~-~~~---~~~~~~-------------------------------------------- 318 (428)
..+.+ .+| ..+.+..+ .|. .+|.|-
T Consensus 275 ~~~~yeL---PDG--~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 349 (498)
T 3qb0_A 275 AKRSIES---PWN--EEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPT 349 (498)
T ss_dssp CCEEEEC---SSS--CEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCCCCBCC--------------
T ss_pred CceEEEC---CCC--CEEEECchHhhhCchhhCCHhHcCCcccccccccccccccccccccccccccccccccccccccc
Confidence 11222 234 24555555 433 122221
Q ss_pred -----------------------------------------HHHHHHHHHHHHHHcCCCC--CCCCeEEEEcCCcCcHHH
Q 014219 319 -----------------------------------------FEKCIEHVDTCLAKAKIDR--TAVDDVVIVGGSSRIPKL 355 (428)
Q Consensus 319 -----------------------------------------i~~i~~~i~~~l~~~~~~~--~~i~~Vvl~GG~s~~~~l 355 (428)
...|.+.+.+.+.++..+. .-...|+|+||++..|++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf 429 (498)
T 3qb0_A 350 EEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGL 429 (498)
T ss_dssp ---------------------------------------CCSCCHHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTH
T ss_pred cccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhH
Confidence 1125677777787766543 123899999999999999
Q ss_pred HHHHHhhc----CC--CCcCCC---CChhhHHHhHHHHHHH
Q 014219 356 QQLLQDFF----LG--KNLCRH---INADEAVATGAAIQAA 387 (428)
Q Consensus 356 ~~~l~~~~----~~--~~v~~~---~~p~~ava~Ga~~~~~ 387 (428)
.++|++.+ |. .+|..+ .++.+++..|+++++.
T Consensus 430 ~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~WiGgsilas 470 (498)
T 3qb0_A 430 SDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTS 470 (498)
T ss_dssp HHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEcccEEEec
Confidence 99999876 32 344555 5778999999999985
No 23
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.76 E-value=8.9e-17 Score=145.55 Aligned_cols=180 Identities=18% Similarity=0.151 Sum_probs=118.9
Q ss_pred cCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHH
Q 014219 168 CGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMV 247 (428)
Q Consensus 168 ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~ 247 (428)
++......+.|++|+++++...... ...++|+|||++++.++. .++.++.....+.+..|+.++++.+.
T Consensus 69 a~~~~~~~Vne~~aha~a~~~~~~~----------~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a 137 (276)
T 4ehu_A 69 NYSDADKQISELSCHARGVNFIIPE----------TRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMA 137 (276)
T ss_dssp GCCSCSEECCHHHHHHHHHHHHSTT----------CCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHH
T ss_pred HhhCCCcccchHHHHHHHHHHhCCC----------CCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHH
Confidence 3445678899999999987654432 247899999999999884 45667766777778888888888888
Q ss_pred HHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeecccCcceeE--------EeeHHHHHHHHHHHH
Q 014219 248 DYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEGINFSS--------TITRARFEQLNMDLF 319 (428)
Q Consensus 248 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~~~~~~~--------~i~~~~~~~~~~~~i 319 (428)
+++...+.... ++ ........+ +. +....+ .-.....++++..+.
T Consensus 138 ~~l~~~~~~~~-------------------~~--~~~a~~~~~--i~----~~~~~f~~s~~~~~~~~~~~~~di~a~~~ 190 (276)
T 4ehu_A 138 KIIEVDVSELG-------------------SI--SMNSQNEVS--IS----STCTVFAESEVISHLSENAKIEDIVAGIH 190 (276)
T ss_dssp HHHTCCGGGHH-------------------HH--HTTCSSCCC--CC----CCSHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHhccChhhhH-------------------HH--HhcCCCCCC--cC----CccchhhhhHHHHhhhccccHHHHHHHHH
Confidence 88743221110 00 000000000 00 000000 000011244555555
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhc
Q 014219 320 EKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILS 390 (428)
Q Consensus 320 ~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~ 390 (428)
+.+.+.+.....+. ..++.|+|+||.+++|.|++.+++.| +.++..|++|++++|.|||++|....
T Consensus 191 ~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 191 TSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 55555555554443 34578999999999999999999999 89999999999999999999997653
No 24
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.69 E-value=6.3e-15 Score=148.02 Aligned_cols=118 Identities=14% Similarity=0.216 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHH-HHcCCcc-----CeEEEEeCCCCCHHHHHHHHH-HHHHcCCceEeeechhHHHHHHhhcccc
Q 014219 119 AEEISSMVLKKKREIAE-AFVGTAV-----TNAVITVPAYFSDSQRQATED-AATQCGLQVLKIIAEPTAAAIAYGLDRQ 191 (428)
Q Consensus 119 ~~~l~~~~l~~l~~~~~-~~~~~~~-----~~~vitvP~~~~~~~~~~l~~-a~~~ag~~~v~~~~E~~Aaa~~~~~~~~ 191 (428)
..+.+.+ ++.+++++- ..++... ..++++.|..++...|+.|.+ +++..+++.+.+..++++++++++..
T Consensus 170 ~~~~wdd-~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-- 246 (593)
T 4fo0_A 170 LTAVLAD-IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-- 246 (593)
T ss_dssp HHHHHHH-HHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS--
T ss_pred hhcCHHH-HHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC--
Confidence 3444444 455666654 3454322 359999999999999999877 66778999999999999999988743
Q ss_pred ccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHH
Q 014219 192 QQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFVEE 253 (428)
Q Consensus 192 ~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~~ 253 (428)
+.+|||+|++.|+++-+. ++..-.- ......+||.++++.|.++|..+
T Consensus 247 -----------tglVVDiG~~~T~v~PV~--dG~~l~~-~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 247 -----------STCIVDVGDQKTSVCCVE--DGVSHRN-TRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp -----------EEEEEEECSSCEEEEEEE--SSCBCGG-GCEEESCCHHHHHHHHHHHHHHT
T ss_pred -----------ceEEEEeCCCceeeeeeE--CCEEehh-heEEecccHHHHHHHHHHHHHhc
Confidence 469999999999998776 3321100 11226899999999999998653
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.55 E-value=6.3e-15 Score=138.36 Aligned_cols=196 Identities=20% Similarity=0.181 Sum_probs=136.2
Q ss_pred HHHHHHHHHHc-CC--ceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCC
Q 014219 158 RQATEDAATQC-GL--QVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGN 234 (428)
Q Consensus 158 ~~~l~~a~~~a-g~--~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~ 234 (428)
-+.+.+|++++ |+ ..-. .||.||+++++..... ...++++|+||||||++++..+... +...
T Consensus 370 m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE~--------eLGvaiIDmGGGTTd~sVf~~G~lv-----~a~~ 434 (610)
T 2d0o_A 370 MAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPGT--------TRPLAILDLGAGSTDASIINPKGDI-----IATH 434 (610)
T ss_dssp HHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTTC--------CSSEEEEEECSSEEEEEEECTTCCE-----EEEE
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCC--------cCCeEEEEeCCCcceEEEEcCCcEE-----EEEE
Confidence 67889999999 99 4444 9999999999999887 7779999999999999999854444 4455
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCC----------ceeEEE--eecccCc--
Q 014219 235 TRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTI----------QTSIEI--DYLYEGI-- 300 (428)
Q Consensus 235 ~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~----------~~~~~~--~~~~~~~-- 300 (428)
.+.||++++..+..-|.-. + +..||++|. +.... ...+.+ +......
T Consensus 435 ip~gG~~VT~DIA~~Lgt~-------d-----------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~ 495 (610)
T 2d0o_A 435 LAGAGDMVTMIIARELGLE-------D-----------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFA 495 (610)
T ss_dssp EECSHHHHHHHHHHHHTCC-------C-----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTT
T ss_pred eccchHHHHHHHHHHhCCC-------C-----------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceee
Confidence 8999999999998777321 0 388999999 64221 122334 2111100
Q ss_pred -------ceeEEeeHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCCCeEEEEcCCcCcHHHHHHHHhhcC
Q 014219 301 -------NFSSTITRAR--FEQLNMDLFEKCIEH--VDTCLAKAKI-----DRTAVDDVVIVGGSSRIPKLQQLLQDFFL 364 (428)
Q Consensus 301 -------~~~~~i~~~~--~~~~~~~~i~~i~~~--i~~~l~~~~~-----~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~ 364 (428)
..-..+ +.. +|+ ++.+-+++.+. +...|.+.+. ...++..|+|+||+|+++++.+..++.|.
T Consensus 496 Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~ 573 (610)
T 2d0o_A 496 RVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALA 573 (610)
T ss_dssp CEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTT
T ss_pred eeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhC
Confidence 011133 444 566 55555554443 2223444322 12456899999999999999999999994
Q ss_pred CCC-------cCCCCChhhHHHhHHHHHHHHh
Q 014219 365 GKN-------LCRHINADEAVATGAAIQAAIL 389 (428)
Q Consensus 365 ~~~-------v~~~~~p~~ava~Ga~~~~~~~ 389 (428)
.-+ .+....|.+|+|.|++++....
T Consensus 574 ~y~VRiGrP~~~gv~gP~fAtAvGLlly~~~~ 605 (610)
T 2d0o_A 574 HYRLVAGRGNIRGSEGPRNAVATGLILSWHKE 605 (610)
T ss_dssp TSSCEEEECCGGGTSTTSCHHHHHHHHHHHHH
T ss_pred cCCeEEecCCccccCCCcHHHHHHHHHHHhhh
Confidence 312 2346799999999999987653
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.53 E-value=1.1e-14 Score=137.28 Aligned_cols=194 Identities=20% Similarity=0.165 Sum_probs=135.7
Q ss_pred HHHHHHHHHHc-CC--ceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCC
Q 014219 158 RQATEDAATQC-GL--QVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGN 234 (428)
Q Consensus 158 ~~~l~~a~~~a-g~--~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~ 234 (428)
-+.+.+|++++ |+ ..-. .||.||+++++.+... ...++++|+||||||++++.-+... +...
T Consensus 372 m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE~--------elGvaiIDmGgGTTd~sVf~~g~lv-----~a~~ 436 (607)
T 1nbw_A 372 MQVIARELSARLQTEVVVGG--VEANMAIAGALTTPGC--------AAPLAILDLGAGSTDAAIVNAEGQI-----TAVH 436 (607)
T ss_dssp SCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTTC--------CSSEEEEEECSSEEEEEEECSSSCE-----EEEE
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCC--------cCCeEEEEeCCCcceEEEEcCCcEE-----EEEE
Confidence 45688899999 98 3333 9999999999999887 7779999999999999999855444 4555
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCC----------ceeEEE--eecccCc-c
Q 014219 235 TRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTI----------QTSIEI--DYLYEGI-N 301 (428)
Q Consensus 235 ~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~----------~~~~~~--~~~~~~~-~ 301 (428)
.+.||++++..+..-|.-. + +..||++|. +.... ...+.+ +...... .
T Consensus 437 ip~gG~~VT~DIA~~Lg~~-------d-----------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~ 497 (607)
T 1nbw_A 437 LAGAGNMVSLLIKTELGLE-------D-----------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFA 497 (607)
T ss_dssp EECCHHHHHHHHHHHHTCS-------C-----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTT
T ss_pred eccchHHHHHHHHHHhCCC-------C-----------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceee
Confidence 8999999999998777321 0 388999999 64221 122333 2111100 0
Q ss_pred e--------eEEeeHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCCC-----CCCCeEEEEcCCcCcHHHHHHHHhhcC
Q 014219 302 F--------SSTITRAR--FEQLNMDLFEKCIEH--VDTCLAKAKIDR-----TAVDDVVIVGGSSRIPKLQQLLQDFFL 364 (428)
Q Consensus 302 ~--------~~~i~~~~--~~~~~~~~i~~i~~~--i~~~l~~~~~~~-----~~i~~Vvl~GG~s~~~~l~~~l~~~~~ 364 (428)
. -..+ +.. +|+ ++.+-+++.+. +...|.+.+... .++..|+|+||+|+++++.+..++.|.
T Consensus 498 R~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~ 575 (607)
T 1nbw_A 498 KVVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALS 575 (607)
T ss_dssp CEEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHH
T ss_pred eeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhC
Confidence 1 1133 344 555 55555554443 344477755432 456899999999999999999999994
Q ss_pred CCC-------cCCCCChhhHHHhHHHHHHH
Q 014219 365 GKN-------LCRHINADEAVATGAAIQAA 387 (428)
Q Consensus 365 ~~~-------v~~~~~p~~ava~Ga~~~~~ 387 (428)
.-+ .+....|.+|+|.|++++..
T Consensus 576 ~~~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 576 HYGVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp TTTCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred cCCeEEecCCccccCCchHHHHHHHHHhhh
Confidence 312 23467999999999998764
No 27
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.25 E-value=3.9e-10 Score=100.92 Aligned_cols=171 Identities=19% Similarity=0.216 Sum_probs=101.8
Q ss_pred EeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHH
Q 014219 173 LKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFVE 252 (428)
Q Consensus 173 v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~ 252 (428)
..+++|..|.+.+....... . -+++|+||+++.+..+ .++.+........+..|+-.+.+.+.+.+
T Consensus 77 ~~~v~Ei~ah~~ga~~~~~~--------~--~~vidiGGqd~k~i~~--~~g~v~~~~mn~~ca~GtG~~le~~a~~l-- 142 (270)
T 1hux_A 77 DKQMSELSCHAMGASFIWPN--------V--HTVIDIGGQDVKVIHV--ENGTMTNFQMNDKCAAGTGRFLDVMANIL-- 142 (270)
T ss_dssp SEEECHHHHHHHHHHHHCTT--------C--CEEEEEETTEEEEEEE--ETTEEEEEEEESSCCTTSHHHHHHHHHHH--
T ss_pred CCCcccHHHHHHHHHHhCCC--------C--CEEEEECCCceEEEEE--eCCceeeeccccccchhhHHHHHHHHHHh--
Confidence 35699999999766433322 1 1689999999998777 36654433455545555554544444433
Q ss_pred HHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeecccCcceeEEeeHHHH----------HHHHHHHHHHH
Q 014219 253 EFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEGINFSSTITRARF----------EQLNMDLFEKC 322 (428)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------~~~~~~~i~~i 322 (428)
+ .++ ++.++.... .... +.+ +. ....+.+.++ ++++..+++.+
T Consensus 143 --g----~~~-----------~el~~la~~--~~~p--~~~-----~~-~c~vfa~s~v~~l~~~g~~~~di~~av~e~V 195 (270)
T 1hux_A 143 --E----VKV-----------SDLAELGAK--STKR--VAI-----SS-TCTVFAESEVISQLSKGTDKIDIIAGIHRSV 195 (270)
T ss_dssp --T----CCT-----------TTHHHHHTT--CCSC--CCC-----CC-CSHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred --C----CCH-----------HHHHHHHhh--CCCC--CCc-----cc-ccchhHhHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 2 111 111222111 0000 000 00 0001112221 34444555555
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHh
Q 014219 323 IEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAIL 389 (428)
Q Consensus 323 ~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~ 389 (428)
...+.+.++..+. .+.|+++||.++++++++.+++.+ +.++..+.+|..+.|.|||+++...
T Consensus 196 a~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 196 ASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 5555555544321 368999999999999999999999 8889999999999999999999765
No 28
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.93 E-value=1.2e-07 Score=84.54 Aligned_cols=76 Identities=17% Similarity=0.079 Sum_probs=53.8
Q ss_pred eeHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcC-CcCcHHHHHHHHhhc--CCCCcCCCCChhhHHHhH
Q 014219 306 ITRARFE-QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGG-SSRIPKLQQLLQDFF--LGKNLCRHINADEAVATG 381 (428)
Q Consensus 306 i~~~~~~-~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG-~s~~~~l~~~l~~~~--~~~~v~~~~~p~~ava~G 381 (428)
.+++|+. .++..+.+.|..+.....+..+ ++.|+++|| .+..|.+++.+++.+ .+.++..+.+|+++.|.|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 3455543 2333344444444443344432 457999999 899999999999975 477889999999999999
Q ss_pred HHHHH
Q 014219 382 AAIQA 386 (428)
Q Consensus 382 a~~~~ 386 (428)
|++.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 29
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.67 E-value=1.2e-07 Score=92.37 Aligned_cols=124 Identities=15% Similarity=0.252 Sum_probs=88.3
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEE
Q 014219 143 TNAVITVPAYFSDSQRQATEDAA-TQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAI 221 (428)
Q Consensus 143 ~~~vitvP~~~~~~~~~~l~~a~-~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~ 221 (428)
..+++|.|..++...|+.|.+++ +..|++.+.++.+|.+++++++.. ...+|||+|+|+|+++.+.
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~------------ttGLVVDiG~g~T~VvPV~- 288 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGIS------------TSTCVVNIGAAETRIACVD- 288 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCS------------SCEEEEEECSSCEEEEEEE-
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCC------------CceEEEcCCCceEEEEEEe-
Confidence 47999999999999999998855 568999999999999999987641 2359999999999999886
Q ss_pred eCCeEEEEEecCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccC
Q 014219 222 ENGVIRVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSST 286 (428)
Q Consensus 222 ~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~ 286 (428)
++..-. .......+||+++|+.|.++|..+--......+.. ..=...++.+|++++-.
T Consensus 289 -eG~vl~-~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t-----~~e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 289 -EGTVLE-HSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDS-----KHGWLLAERLKKNFTTF 346 (655)
T ss_dssp -TTEECG-GGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTS-----HHHHHHHHHHHHHHCCC
T ss_pred -CCEEEh-hheeeecchHHHHHHHHHHHHHHcCCCccccCCCC-----cchHHHHHHHHHheEEE
Confidence 443210 01112689999999999999965410000001110 11146788899988644
No 30
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=97.85 E-value=0.00097 Score=60.56 Aligned_cols=79 Identities=18% Similarity=0.231 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCc
Q 014219 158 RQATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRL 237 (428)
Q Consensus 158 ~~~l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~ 237 (428)
.+.+..+-+..|++.-.+-.|-+|...+......... .....+|+|+|||+|.+++++ ++.+. ...+.++
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~-----~~~~~lviDIGGGStEl~~~~--~~~~~---~~~Sl~l 161 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPM-----EDHISLAMDIGGGSVEFIIGN--KNEIL---WKQSFEI 161 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCC-----TTCCEEEEEECSSCEEEEEEC--SSCEE---EEEEESC
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCC-----CCCCEEEEEeCCCceEEEEEE--CCeEe---eeEEEec
Confidence 3445566666799775555555555444332222110 135689999999999999997 33322 2334799
Q ss_pred chHHHHHHH
Q 014219 238 GGVDFNNRM 246 (428)
Q Consensus 238 Gg~~id~~l 246 (428)
|.-.+.+.+
T Consensus 162 G~vrl~e~f 170 (315)
T 3mdq_A 162 GGQRLIDRF 170 (315)
T ss_dssp CHHHHHHHS
T ss_pred hhhHHHHHh
Confidence 998888766
No 31
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.70 E-value=0.0004 Score=63.50 Aligned_cols=70 Identities=17% Similarity=0.071 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHcCCCCCCCCeEEEEcC-CcCcHHHHHHHHhhc-----CCCCcCCCCChhhHHHhH
Q 014219 312 EQLNMDLFEKCIEHVDTCL----AKAKIDRTAVDDVVIVGG-SSRIPKLQQLLQDFF-----LGKNLCRHINADEAVATG 381 (428)
Q Consensus 312 ~~~~~~~i~~i~~~i~~~l----~~~~~~~~~i~~Vvl~GG-~s~~~~l~~~l~~~~-----~~~~v~~~~~p~~ava~G 381 (428)
++++..++..|.+.|.... ++.+ ++.|+++|| .+..|++++.|++.+ ++.++..+.+|+++-|.|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 3444555555555544332 3433 347999999 999999999999997 256888899999999999
Q ss_pred HHHHH
Q 014219 382 AAIQA 386 (428)
Q Consensus 382 a~~~~ 386 (428)
|++..
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99975
No 32
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.70 E-value=0.029 Score=51.18 Aligned_cols=67 Identities=19% Similarity=0.256 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcC--CCCcCCCCC---hhhHHHhHHHHHHHHhcC
Q 014219 320 EKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFL--GKNLCRHIN---ADEAVATGAAIQAAILSG 391 (428)
Q Consensus 320 ~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~--~~~v~~~~~---p~~ava~Ga~~~~~~~~~ 391 (428)
+.+.+.+.+..+..+ .+.|+|+||-+....+++.+.+.+. +.++..++. -+.+++.|++.+.....+
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~~ 301 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAG 301 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhcC
Confidence 334444444444433 4689999999999999999998773 456666653 235788888877655544
No 33
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.65 E-value=0.002 Score=58.37 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=51.8
Q ss_pred HHHHHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCc
Q 014219 158 RQATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRL 237 (428)
Q Consensus 158 ~~~l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~ 237 (428)
.+.+..+-+..|++.-.+-.|.+|...+........ .....+|+|+|||+|.+++++ ++.+. ...+.++
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~------~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~~ 168 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK------PEGEVCVVDQGGGSTEYVFGK--GYKVR---EVISLPI 168 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC------CCSEEEEEEEETTEEEEEEEE--TTEEE---EEEEECC
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc------cCCCEEEEEeCCCcEEEEEEe--CCcee---eEEEEec
Confidence 344555556789987555566666555543322220 145689999999999999986 44432 2334899
Q ss_pred chHHHHHHH
Q 014219 238 GGVDFNNRM 246 (428)
Q Consensus 238 Gg~~id~~l 246 (428)
|+..+.+.+
T Consensus 169 G~v~l~e~~ 177 (315)
T 1t6c_A 169 GIVNLTETF 177 (315)
T ss_dssp CHHHHHHHH
T ss_pred cHHHHHHHh
Confidence 999998887
No 34
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=97.43 E-value=0.0031 Score=56.62 Aligned_cols=69 Identities=16% Similarity=0.069 Sum_probs=41.5
Q ss_pred eHHHHHHHHHH----HHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcC-----C-CCChhh
Q 014219 307 TRARFEQLNMD----LFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLC-----R-HINADE 376 (428)
Q Consensus 307 ~~~~~~~~~~~----~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~-----~-~~~p~~ 376 (428)
+.++.+++.+. .++.|.+.+.+++++.+ +..|+.+||+ ++|...+.+.+ ++. . +.+..-
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~-----~~~vv~aG~G---~~L~~~la~~~---~~~~~~~~i~~~~s~v 312 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYG-----SKKVVITGLG---ENILKDALADF---EVISVAERYGKDVSLA 312 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEEESTT---HHHHHHHTTTS---EEEEHHHHHCHHHHHS
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEeCCc---HHHHHHHHhhC---CeeehhcccCcccccc
Confidence 44555554444 45566666666666542 3489999987 46666665553 222 2 334566
Q ss_pred HHHhHHHHHH
Q 014219 377 AVATGAAIQA 386 (428)
Q Consensus 377 ava~Ga~~~~ 386 (428)
+.|.|++++-
T Consensus 313 apA~avA~l~ 322 (334)
T 3cet_A 313 TPSFAVAELL 322 (334)
T ss_dssp HHHHHHHHHH
T ss_pred cCHHHHHHHH
Confidence 7899998663
No 35
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.41 E-value=0.055 Score=48.67 Aligned_cols=71 Identities=20% Similarity=0.126 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCc-Cc-HHHHHHHHhhcC-------CCCcCCCCChhhHHHhHHH
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSS-RI-PKLQQLLQDFFL-------GKNLCRHINADEAVATGAA 383 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s-~~-~~l~~~l~~~~~-------~~~v~~~~~p~~ava~Ga~ 383 (428)
++++...+.+...+...+... +++.|+|.||.+ .. +.+.+.+++.+. ..++..+.....+.+.||+
T Consensus 216 ~~~~~~~~~l~~~i~~l~~~~-----~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa 290 (302)
T 3vov_A 216 RLVLQAARYVGIGLASLVKAF-----DPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAA 290 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----CCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----CCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHH
Confidence 444555555555555555543 356899999977 54 666666665552 1134455556779999999
Q ss_pred HHHHH
Q 014219 384 IQAAI 388 (428)
Q Consensus 384 ~~~~~ 388 (428)
.++..
T Consensus 291 ~l~~~ 295 (302)
T 3vov_A 291 LTAYL 295 (302)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 36
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.35 E-value=0.038 Score=50.37 Aligned_cols=69 Identities=13% Similarity=0.087 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcC--------CCCcCCCCChhhHHHhHHHH
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFL--------GKNLCRHINADEAVATGAAI 384 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~--------~~~v~~~~~p~~ava~Ga~~ 384 (428)
++++...+.+...+...+... +++.|+|.||.+..+.+.+.+++.+. ..++....-...+.++||+.
T Consensus 248 ~~~~~~~~~La~~i~~l~~~l-----~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~ 322 (327)
T 4db3_A 248 EHVERFMELLAICFGNIFTAN-----DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAF 322 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHH
Confidence 344444455555555555543 35689999999988888888877662 12344455567889999997
Q ss_pred HH
Q 014219 385 QA 386 (428)
Q Consensus 385 ~~ 386 (428)
++
T Consensus 323 l~ 324 (327)
T 4db3_A 323 LN 324 (327)
T ss_dssp TT
T ss_pred HH
Confidence 65
No 37
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=97.30 E-value=0.025 Score=51.49 Aligned_cols=74 Identities=14% Similarity=-0.010 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCc-HHHHHHHHhhc----C------CCCcCCCCChhhHHHhH
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRI-PKLQQLLQDFF----L------GKNLCRHINADEAVATG 381 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~-~~l~~~l~~~~----~------~~~v~~~~~p~~ava~G 381 (428)
++++...+.+...+...+... +++.|+|.||.+.. +++.+.+++.+ . ..++........+.+.|
T Consensus 231 ~~~~~~~~~La~~i~~l~~~l-----~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~G 305 (321)
T 3vgl_A 231 DSFRELARWAGAGLADLASLF-----DPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVG 305 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----CCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHH
Confidence 344445555555555555553 34689999998875 55555454443 1 22455555677899999
Q ss_pred HHHHHHHhcC
Q 014219 382 AAIQAAILSG 391 (428)
Q Consensus 382 a~~~~~~~~~ 391 (428)
|+.+......
T Consensus 306 Aa~l~~~~~~ 315 (321)
T 3vgl_A 306 AADLARQGLE 315 (321)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHHhhhh
Confidence 9988765433
No 38
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=97.27 E-value=0.011 Score=53.93 Aligned_cols=69 Identities=16% Similarity=0.099 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCc-HHHHHHHHhhcC---------CCCcCCCCChhhHHHhHHH
Q 014219 314 LNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRI-PKLQQLLQDFFL---------GKNLCRHINADEAVATGAA 383 (428)
Q Consensus 314 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~-~~l~~~l~~~~~---------~~~v~~~~~p~~ava~Ga~ 383 (428)
+++...+.+...+...+... +++.|+|.||.++. +.+.+.+++.+. ..++........+.+.||+
T Consensus 240 ~~~~~~~~La~~i~~l~~~l-----dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa 314 (321)
T 3r8e_A 240 VWADIGTIIGESLVNIVRVM-----DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAA 314 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-----CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHH
Confidence 44444444445555555543 35689999998876 666666665541 3456666677789999999
Q ss_pred HHHH
Q 014219 384 IQAA 387 (428)
Q Consensus 384 ~~~~ 387 (428)
.++.
T Consensus 315 ~l~~ 318 (321)
T 3r8e_A 315 GLIM 318 (321)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
No 39
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.26 E-value=0.098 Score=46.89 Aligned_cols=71 Identities=14% Similarity=0.111 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHh
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAIL 389 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~ 389 (428)
++++...+.+...+...+... +++.|+|.||.+..+.+.+.+++.++..++..+. ...+.+.||++++...
T Consensus 218 ~il~~~~~~La~~i~~l~~~l-----~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 218 DILKQGAELLASQAVYLARKI-----GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYKE 288 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc-----CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHHh
Confidence 344444455555555555543 3568999999887788889888888544666565 5577899999888654
No 40
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=97.26 E-value=0.0011 Score=60.88 Aligned_cols=83 Identities=16% Similarity=0.181 Sum_probs=48.4
Q ss_pred HHHHHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEE--eC--CeEEEEEecC
Q 014219 158 RQATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAI--EN--GVIRVRATDG 233 (428)
Q Consensus 158 ~~~l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~--~~--~~~~~~~~~~ 233 (428)
.+.+..+-+..|++.-.+-.|-+|...+......... .......+++|+|||+|++++++- .. +.+. ...
T Consensus 105 ~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~---~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~---~~~ 178 (343)
T 3cer_A 105 EEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNR---DDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQ---GAF 178 (343)
T ss_dssp HHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCT---TTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCS---EEE
T ss_pred HHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCcc---ccccCCEEEEEeCCCceEEEEeecCccCcccccc---eeE
Confidence 3445556666798764444444444433332222110 012345899999999999999864 22 1111 233
Q ss_pred CCCcchHHHHHHH
Q 014219 234 NTRLGGVDFNNRM 246 (428)
Q Consensus 234 ~~~~Gg~~id~~l 246 (428)
+.++|+..+.+.+
T Consensus 179 SlplG~v~lt~~~ 191 (343)
T 3cer_A 179 SMNIGSVRMTERH 191 (343)
T ss_dssp EESCCHHHHHHHT
T ss_pred EEehhHHHHHHHh
Confidence 4799999998887
No 41
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.23 E-value=0.042 Score=49.37 Aligned_cols=74 Identities=12% Similarity=0.103 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCC-----CCcCCCCChhhHHHhHHHHHHH
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLG-----KNLCRHINADEAVATGAAIQAA 387 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~-----~~v~~~~~p~~ava~Ga~~~~~ 387 (428)
++++...+.+...+...+.-. +++.|+|.||.+..+.+.+.+++.+.. .++........+.+.||++++.
T Consensus 216 ~~~~~~~~~La~~i~~l~~~~-----~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 216 RLITEFYTGICTGLYNLIYLF-----DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHH
Confidence 444445555555555555543 356899999999888788888887742 2344555667799999999887
Q ss_pred HhcC
Q 014219 388 ILSG 391 (428)
Q Consensus 388 ~~~~ 391 (428)
...+
T Consensus 291 ~~~~ 294 (297)
T 4htl_A 291 QEEN 294 (297)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 6543
No 42
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.12 E-value=0.13 Score=45.83 Aligned_cols=73 Identities=10% Similarity=-0.052 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcC-----------CCCcCCCCChhhHHHhH
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFL-----------GKNLCRHINADEAVATG 381 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~-----------~~~v~~~~~p~~ava~G 381 (428)
++++...+.+...+...+... +++.|+|.||.+..+.+.+.+++.+. ..++........+.+.|
T Consensus 206 ~i~~~~~~~L~~~i~~l~~~l-----~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~G 280 (292)
T 2gup_A 206 EAIERMNRNLAQGLLNIQYLI-----DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYG 280 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHH
Confidence 444555555555555555553 34689999998877777777766551 13444444556789999
Q ss_pred HHHHHHHhc
Q 014219 382 AAIQAAILS 390 (428)
Q Consensus 382 a~~~~~~~~ 390 (428)
|+.++....
T Consensus 281 Aa~~~~~~~ 289 (292)
T 2gup_A 281 ALVNWLQEE 289 (292)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999876544
No 43
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=97.08 E-value=0.17 Score=46.33 Aligned_cols=46 Identities=2% Similarity=-0.022 Sum_probs=34.0
Q ss_pred ccCeEEEEeCCCCCHHHHHHHHHHHHHc-C--CceEeeechhHHHHHHh
Q 014219 141 AVTNAVITVPAYFSDSQRQATEDAATQC-G--LQVLKIIAEPTAAAIAY 186 (428)
Q Consensus 141 ~~~~~vitvP~~~~~~~~~~l~~a~~~a-g--~~~v~~~~E~~Aaa~~~ 186 (428)
++..+.+++|-..+......+.+.++.. + ...+.+..+..|++++.
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~ 118 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA 118 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh
Confidence 4678999999888776555666666554 3 14678999999999983
No 44
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.90 E-value=0.24 Score=45.07 Aligned_cols=70 Identities=19% Similarity=0.274 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcC--CCCcCCCCC---hhhHHHhHHHHHHHHhcCC
Q 014219 318 LFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFL--GKNLCRHIN---ADEAVATGAAIQAAILSGV 392 (428)
Q Consensus 318 ~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~--~~~v~~~~~---p~~ava~Ga~~~~~~~~~~ 392 (428)
+.+.+.+.+.+.++..+ ++.|+|+||-+...++++.+.+.+. +.++..++. -+.+++.|++.+.....+.
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g~ 307 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSGV 307 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcCC
Confidence 34445555566666544 4689999999999999999999874 445555543 3467888888877766663
No 45
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.88 E-value=0.0023 Score=63.21 Aligned_cols=86 Identities=15% Similarity=0.195 Sum_probs=62.3
Q ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHH
Q 014219 305 TITRARFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAI 384 (428)
Q Consensus 305 ~i~~~~~~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~ 384 (428)
.-++.++...++-+++.+.-.+++.++........++.|.++||+++++.+.+.+...+ +.+|.++. ..++.|.|||+
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~~-~~e~~alGAA~ 485 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLPE-ESEAMLLGSAM 485 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEES-CSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEecC-CCcchHHHHHH
Confidence 34677774434455555554444444432222245789999999999999999999999 89888774 45689999999
Q ss_pred HHHHhcCC
Q 014219 385 QAAILSGV 392 (428)
Q Consensus 385 ~~~~~~~~ 392 (428)
+|+.-.|.
T Consensus 486 lA~~a~G~ 493 (554)
T 3l0q_A 486 MGTVAAGV 493 (554)
T ss_dssp HHHHHTTS
T ss_pred HHHHHcCC
Confidence 99988773
No 46
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.88 E-value=0.21 Score=45.36 Aligned_cols=72 Identities=21% Similarity=0.076 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcC-cHHHHHHHHhhcC---------CCCcCCCCChhhHHHhHH
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSR-IPKLQQLLQDFFL---------GKNLCRHINADEAVATGA 382 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~-~~~l~~~l~~~~~---------~~~v~~~~~p~~ava~Ga 382 (428)
++++...+.+...+...+...+ ++.|+|.||.+. .+.+.+.+++.+. ..++........+.+.||
T Consensus 241 ~i~~~~~~~L~~~i~~l~~~l~-----p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GA 315 (326)
T 2qm1_A 241 MVVDRVCFYLGLATGNLGNTLN-----PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGA 315 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-----CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-----CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHH
Confidence 4445555555555555555543 468999999886 5777777776652 234455556677899999
Q ss_pred HHHHHHh
Q 014219 383 AIQAAIL 389 (428)
Q Consensus 383 ~~~~~~~ 389 (428)
+.++...
T Consensus 316 a~l~~~~ 322 (326)
T 2qm1_A 316 ASLALQF 322 (326)
T ss_dssp HHHGGGG
T ss_pred HHHHHHh
Confidence 9987543
No 47
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.86 E-value=0.0018 Score=62.88 Aligned_cols=76 Identities=22% Similarity=0.235 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcC
Q 014219 315 NMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSG 391 (428)
Q Consensus 315 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~ 391 (428)
++-+++.+.-.+.+.++........++.|.++||+++++.+.+.+...+ +.+|..+..++.+.|.|||+.++.-.|
T Consensus 362 ~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 362 ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHHHHHcC
Confidence 3444444444444444432222234678999999999999999999999 899988877766799999999988776
No 48
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.83 E-value=0.003 Score=61.46 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcC
Q 014219 314 LNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSG 391 (428)
Q Consensus 314 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~ 391 (428)
+++-+++.+.-.+.+.++...... .++.|.++||+++++.+.+.+...+ +.+|.++.. .++.|.|||+.++.-.|
T Consensus 369 l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~-~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 369 LARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRPVV-KETTALGAAYLAGLAVD 443 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEESC-SCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEcCC-CcchHHHHHHHHHHHhC
Confidence 344455555555555555544333 5788999999999999999999999 899887754 45899999999998877
No 49
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=96.80 E-value=0.023 Score=55.26 Aligned_cols=77 Identities=21% Similarity=0.235 Sum_probs=46.5
Q ss_pred HHHHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcc
Q 014219 159 QATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLG 238 (428)
Q Consensus 159 ~~l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~G 238 (428)
+.+..+-+..|++.-.+-.|-+|...+.+...... .....+|+|||||+|.+++.+ ++.+. ...+.++|
T Consensus 100 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~------~~~~~lviDIGGGStEl~~~~--~~~~~---~~~Sl~lG 168 (513)
T 1u6z_A 100 DFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQP------EKGRKLVIDIGGGSTELVIGE--NFEPI---LVESRRMG 168 (513)
T ss_dssp HHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSC------CCSCEEEEEECSSCEEEEEEE--TTEEE---EEEEESCC
T ss_pred HHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhcc------CCCCEEEEEECCCcEEEEEEe--CCeee---EEEEEecc
Confidence 34455555568876444444444444333222210 122689999999999999875 44432 23347999
Q ss_pred hHHHHHHH
Q 014219 239 GVDFNNRM 246 (428)
Q Consensus 239 g~~id~~l 246 (428)
.-.+.+.+
T Consensus 169 ~vrlte~f 176 (513)
T 1u6z_A 169 CVSFAQLY 176 (513)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988876
No 50
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=96.79 E-value=0.021 Score=49.72 Aligned_cols=21 Identities=19% Similarity=0.294 Sum_probs=18.5
Q ss_pred ceEEEEeccCceEEEEEEeCC
Q 014219 6 GVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~~ 26 (428)
++.++||+|+|+++.++++++
T Consensus 3 ~M~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp CEEEEEEECSSEEEEEEESSS
T ss_pred ceEEEEEECCCeEEEEEEECC
Confidence 578999999999999999655
No 51
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.76 E-value=0.0041 Score=61.08 Aligned_cols=78 Identities=15% Similarity=0.101 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcC
Q 014219 312 EQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSG 391 (428)
Q Consensus 312 ~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~ 391 (428)
..+++-+++.+.-.+...++........++.|.++||+++++.+.+.+...+ +.+|.++. +.++.|.|||+.++.-.|
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVID-TANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEECC-CTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEecC-CCCchHHHHHHHHHHHhC
Confidence 3445555555555555666665443345789999999999999999999999 89888774 567899999999988665
No 52
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.73 E-value=0.0033 Score=61.18 Aligned_cols=76 Identities=13% Similarity=0.098 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcCC
Q 014219 315 NMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSGV 392 (428)
Q Consensus 315 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~~ 392 (428)
++-+++.+.-.+.+.++........++.|.++||+++++.+.+.+...+ +.+|..+. +.++.|.|||+.++.-.|.
T Consensus 369 ~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~e~~alGaA~lA~~a~G~ 444 (504)
T 3ll3_A 369 ARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF-NVPIVTMK-EQQSGTLAAMFLARQALGL 444 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEES-CSCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEecC-CCCchhHHHHHHHHHHcCc
Confidence 3444444444443333332211235789999999999999999999999 89988764 5668999999999987773
No 53
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.69 E-value=0.0045 Score=60.40 Aligned_cols=74 Identities=19% Similarity=0.222 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCc-CCCCChhhHHHhHHHHHHHHhcCC
Q 014219 315 NMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNL-CRHINADEAVATGAAIQAAILSGV 392 (428)
Q Consensus 315 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v-~~~~~p~~ava~Ga~~~~~~~~~~ 392 (428)
++-+++.+.-.+.+.++.... .. ++.|.++||+++++.+.+.+...+ +.+| ..+ .+.++.|.|||+.++.-.|.
T Consensus 380 ~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~~e~~alGaA~lA~~a~G~ 454 (511)
T 3hz6_A 380 LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVKP-DAHLHPLRGLAALAAVELEW 454 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEECC-CGGGHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEec-CCCCchHHHHHHHHHHHhCC
Confidence 444445555444444444333 33 789999999999999999999999 8998 666 58889999999999988773
No 54
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.65 E-value=0.0029 Score=61.67 Aligned_cols=51 Identities=29% Similarity=0.511 Sum_probs=44.9
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcC
Q 014219 339 AVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSG 391 (428)
Q Consensus 339 ~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~ 391 (428)
.++.|+++||+++++.+.+.+...+ +.+|..+. +.++.|.|||++++.-.+
T Consensus 424 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~-~~e~~alGAA~lA~~a~G 474 (515)
T 3i8b_A 424 SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRPA-TDEYVAIGAARQAAWVLS 474 (515)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEC-CCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECchhcCHHHHHHHHHHh-CCceEecC-CcccHHHHHHHHHHHHcC
Confidence 4689999999999999999999999 88887764 456889999999998766
No 55
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=96.50 E-value=0.15 Score=44.75 Aligned_cols=21 Identities=24% Similarity=0.414 Sum_probs=18.9
Q ss_pred eEEEEeccCceEEEEEEeCCe
Q 014219 7 VAIGIDLGTTYSCVAVWQHDK 27 (428)
Q Consensus 7 ~~vgID~Gt~~~~va~~~~~~ 27 (428)
+.++||+|+|+++.++++++.
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 689999999999999998763
No 56
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.44 E-value=0.0045 Score=60.28 Aligned_cols=81 Identities=20% Similarity=0.244 Sum_probs=56.7
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHH
Q 014219 307 TRARFE-QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQ 385 (428)
Q Consensus 307 ~~~~~~-~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~ 385 (428)
++.++. .+++.+.-.+...+...-+..+. .++.|.++||+++++.+.+.+...+ +.+|..+. +.++.|.|||++
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~~-~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIV-NTSVERPE-IQETTALGAAFL 448 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEES-CCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHh-CCceEecC-CCcchHHHHHHH
Confidence 444443 23333444444433333222332 4679999999999999999999999 88887764 667899999999
Q ss_pred HHHhcCC
Q 014219 386 AAILSGV 392 (428)
Q Consensus 386 ~~~~~~~ 392 (428)
++.-.|.
T Consensus 449 a~~a~G~ 455 (501)
T 3g25_A 449 AGLAVGF 455 (501)
T ss_dssp HHHHTTS
T ss_pred HHHHhCc
Confidence 9988773
No 57
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.42 E-value=0.0081 Score=58.80 Aligned_cols=81 Identities=20% Similarity=0.210 Sum_probs=57.9
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHH
Q 014219 307 TRARFE-QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQ 385 (428)
Q Consensus 307 ~~~~~~-~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~ 385 (428)
++.++. .+++.+.-.+...+....+..+. .++.|.++||+++++.+.+.+...+ +.+|.++. ..++.|.|||+.
T Consensus 372 ~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~~-~~E~~alGAA~l 446 (526)
T 3ezw_A 372 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERPE-VREVTALGAAYL 446 (526)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEES-CCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeCC-CCchHHHHHHHH
Confidence 455543 33343444444444433333443 4689999999999999999999999 89988774 457889999999
Q ss_pred HHHhcCC
Q 014219 386 AAILSGV 392 (428)
Q Consensus 386 ~~~~~~~ 392 (428)
|+.-.|.
T Consensus 447 A~~a~G~ 453 (526)
T 3ezw_A 447 AGLAVGF 453 (526)
T ss_dssp HHHHTTS
T ss_pred HHHHhCC
Confidence 9998874
No 58
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.37 E-value=0.0073 Score=58.66 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCC-CCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcC
Q 014219 315 NMDLFEKCIEHVDTCLAKAKI-DRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSG 391 (428)
Q Consensus 315 ~~~~i~~i~~~i~~~l~~~~~-~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~ 391 (428)
++-+++.+.-.+...++.... ....++.|.++||+++++.+.+.+...+ +.+|.++. +.++.|.|||+.++.-.|
T Consensus 373 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~~-~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 373 ARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVPE-VTETTALGAALMAGVGAG 448 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEES-CSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEecC-CcccHHHHHHHHHHhhcC
Confidence 334444444444444443311 1234678999999999999999999999 89888764 455899999999988776
No 59
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=96.35 E-value=0.15 Score=47.86 Aligned_cols=71 Identities=10% Similarity=0.036 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCc-HHHHHHHHhhcC---------CCCcCCCCChhhHHHhHHH
Q 014219 314 LNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRI-PKLQQLLQDFFL---------GKNLCRHINADEAVATGAA 383 (428)
Q Consensus 314 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~-~~l~~~l~~~~~---------~~~v~~~~~p~~ava~Ga~ 383 (428)
+++...+.+...+...+.-. +++.|+|.||.+.. +.+.+.+++.+. ..++........+.+.||+
T Consensus 314 ~l~~~~~~L~~~i~~l~~~l-----dP~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa 388 (406)
T 1z6r_A 314 IITGVGAHVGRILAIMVNLF-----NPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAA 388 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----CCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHH
Confidence 34444444444455544443 35689999998763 666666665541 2344444455567889998
Q ss_pred HHHHHh
Q 014219 384 IQAAIL 389 (428)
Q Consensus 384 ~~~~~~ 389 (428)
+....+
T Consensus 389 ~~~~~~ 394 (406)
T 1z6r_A 389 LVKDAM 394 (406)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 776544
No 60
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=96.35 E-value=0.3 Score=44.36 Aligned_cols=68 Identities=21% Similarity=0.154 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCc-HHHHHHHHhhcC--------CCCcCCCCChhhHHHhHHH
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRI-PKLQQLLQDFFL--------GKNLCRHINADEAVATGAA 383 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~-~~l~~~l~~~~~--------~~~v~~~~~p~~ava~Ga~ 383 (428)
++++...+.+...+...+...+ ++.|+|.||.+.. +++.+ +++.+. ..++........+.+.||+
T Consensus 248 ~il~~~~~~La~~i~~l~~~l~-----p~~IvlgG~i~~~~~~~~~-l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa 321 (327)
T 2ap1_A 248 AHVERYLDLLAVCLGNILTIVD-----PDLLVIGGGLSNFTAITTQ-LAERLPRHLLPVARAPRIERARHGDAGGMRGAA 321 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-----CSEEEEESGGGGSTHHHHS-SGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-----CCEEEEeChhhcchhHHHH-HHHHHHHhhccccCCCEEEEcCCCCcHHHHHHH
Confidence 3444455555555555555533 4589999998764 34443 555542 1233334445578899999
Q ss_pred HHH
Q 014219 384 IQA 386 (428)
Q Consensus 384 ~~~ 386 (428)
.++
T Consensus 322 ~la 324 (327)
T 2ap1_A 322 FLH 324 (327)
T ss_dssp HTT
T ss_pred HHH
Confidence 765
No 61
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=96.35 E-value=0.0042 Score=60.56 Aligned_cols=79 Identities=24% Similarity=0.184 Sum_probs=56.6
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHH
Q 014219 307 TRARFE-QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQ 385 (428)
Q Consensus 307 ~~~~~~-~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~ 385 (428)
++.++- .+++.+.-.+...+. .++..+. .++.|.++||+++++.+.+.+...+ +.+|..+..+ ++.|.|||+.
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~~-e~~alGaA~l 444 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLANP-LGSAVGAAWV 444 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEECC-STHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCCC-CchHHHHHHH
Confidence 455543 333444444444333 3334333 4689999999999999999999999 8998887654 4789999999
Q ss_pred HHHhcC
Q 014219 386 AAILSG 391 (428)
Q Consensus 386 ~~~~~~ 391 (428)
++.-.|
T Consensus 445 A~~a~G 450 (508)
T 3ifr_A 445 AAIGGG 450 (508)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 998877
No 62
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.32 E-value=0.0053 Score=59.81 Aligned_cols=81 Identities=22% Similarity=0.251 Sum_probs=57.3
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHH
Q 014219 307 TRARFE-QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQ 385 (428)
Q Consensus 307 ~~~~~~-~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~ 385 (428)
++.++. .+++.+.-.+...+...-+..+. .++.|.++||+++++.+.+.+...+ +.+|.++ .+.++.|.|||+.
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 447 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYL 447 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHH
Confidence 455543 33344444444444333222343 4679999999999999999999999 8888776 4667899999999
Q ss_pred HHHhcCC
Q 014219 386 AAILSGV 392 (428)
Q Consensus 386 ~~~~~~~ 392 (428)
++.-.|.
T Consensus 448 A~~a~G~ 454 (506)
T 3h3n_X 448 AGLAVGF 454 (506)
T ss_dssp HHHHTTS
T ss_pred HHHHhCc
Confidence 9988773
No 63
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.32 E-value=0.0051 Score=60.88 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=56.7
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCc-CcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHH
Q 014219 307 TRARFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSS-RIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQ 385 (428)
Q Consensus 307 ~~~~~~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s-~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~ 385 (428)
++.++ ++-+++.+.-.+.+.++........++.|.++||++ +++.+.+.+...+ +.+|.++. +.++.|.|||+.
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~~-~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVAA-SKQTPALGAAMF 484 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEBC-CSSHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEecC-CCccHHHHHHHH
Confidence 45554 334444444333333332221223578999999999 9999999999999 89887764 578899999999
Q ss_pred HHHhcC
Q 014219 386 AAILSG 391 (428)
Q Consensus 386 ~~~~~~ 391 (428)
++.-.|
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998776
No 64
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=96.30 E-value=0.18 Score=49.62 Aligned_cols=75 Identities=20% Similarity=0.220 Sum_probs=53.6
Q ss_pred eeEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHh-hcCCC---CcCCCCChhhH
Q 014219 302 FSSTITRARFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQD-FFLGK---NLCRHINADEA 377 (428)
Q Consensus 302 ~~~~i~~~~~~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~-~~~~~---~v~~~~~p~~a 377 (428)
..+.||..|++++ .-.-..|..-+.-.+++++.+..+++.|+|.||+++---..+.+.= .+|.. ++...-|...+
T Consensus 498 ~~i~itq~DIr~~-qlAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP~~~~~ki~~vGN~sl~ 576 (631)
T 3zyy_X 498 KDIVITEADIQNL-IRAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPDIDINKFSYVGNSSLK 576 (631)
T ss_dssp SCEEEEHHHHHHH-HHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSCCSCGGGEEECSCHHHH
T ss_pred CcEEEeHHHHHHH-HHHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCCCccccCEEEECcHHHH
Confidence 4689999999874 3455667788888999999998999999999999986555555543 33433 34444454443
No 65
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.29 E-value=0.0046 Score=60.31 Aligned_cols=81 Identities=20% Similarity=0.210 Sum_probs=56.6
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHH
Q 014219 307 TRARFE-QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQ 385 (428)
Q Consensus 307 ~~~~~~-~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~ 385 (428)
++.++. .+++.+.-.+...+...-+..+. .++.|.++||+++++.+.+.+...+ +.+|.++. +.++.|.|||+.
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~e~~alGaA~l 445 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERPE-VREVTALGAAYL 445 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEES-CCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHh-CCceEecC-CCCcHHHHHHHH
Confidence 445443 33344444444443333222233 3679999999999999999999999 88887764 566899999999
Q ss_pred HHHhcCC
Q 014219 386 AAILSGV 392 (428)
Q Consensus 386 ~~~~~~~ 392 (428)
++.-.|.
T Consensus 446 A~~a~G~ 452 (510)
T 2p3r_A 446 AGLAVGF 452 (510)
T ss_dssp HHHHHTS
T ss_pred HHHHhCc
Confidence 9987773
No 66
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.27 E-value=0.0042 Score=60.71 Aligned_cols=52 Identities=25% Similarity=0.191 Sum_probs=44.6
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcCC
Q 014219 339 AVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSGV 392 (428)
Q Consensus 339 ~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~~ 392 (428)
.++.|.++||+++++.+.+.+...+ +.+|.++. +.++.|.|||++|+.-.|.
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~-~~e~~alGAA~lA~~a~G~ 476 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRPV-ILETTALGVAWLAGSRAGV 476 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEES-CCCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEecC-CCccHHHHHHHHHHHHcCC
Confidence 3678999999999999999999999 89988764 5668999999999988773
No 67
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=96.16 E-value=0.015 Score=56.63 Aligned_cols=80 Identities=25% Similarity=0.265 Sum_probs=57.0
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHH
Q 014219 307 TRARFE-QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQ 385 (428)
Q Consensus 307 ~~~~~~-~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~ 385 (428)
++.++. .+++.+.-.+...+...-+..+. .++.|.++||+++++.+.+.+...+ +.+|.++ .+.++.|.|||+.
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 447 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYA 447 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHH
Confidence 445443 33444444444444433332332 3578999999999999999999999 8988776 4456899999999
Q ss_pred HHHhcC
Q 014219 386 AAILSG 391 (428)
Q Consensus 386 ~~~~~~ 391 (428)
++.-.|
T Consensus 448 A~~~~G 453 (504)
T 2d4w_A 448 AGIAVG 453 (504)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 998877
No 68
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=96.15 E-value=0.15 Score=44.86 Aligned_cols=64 Identities=19% Similarity=0.123 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCc-HHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcC
Q 014219 320 EKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRI-PKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSG 391 (428)
Q Consensus 320 ~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~-~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~ 391 (428)
+.+...+...+.-. +++.|+|.||.+.. +.+.+.++ ...++........+.+.||+.++...+.
T Consensus 200 ~~l~~~l~~l~~~l-----dP~~IvlgG~i~~~~~~~~~~~~---~~~~i~~s~l~~~a~~~GAa~l~~~~~~ 264 (267)
T 1woq_A 200 VLLQRYFSHVEFLF-----SPELFIVGGGISKRADEYLPNLR---LRTPIVPAVLRNEAGIVGAAIEIALQHK 264 (267)
T ss_dssp HHHHHHHHHHHHHH-----CCSEEEEESGGGGGGGGTGGGCC---CSSCEEECSCSTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHc-----CCCEEEEeChhhcccHHHHHhhc---cCceEEECCcCCcHHHHHHHHHHHhccc
Confidence 33444444444443 35689999998764 33433332 1334555555567899999998865443
No 69
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=96.08 E-value=0.64 Score=43.98 Aligned_cols=70 Identities=9% Similarity=-0.020 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCc-HHHHHHHHhhcC---------CCCcCCCCChhhHHHhHH
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRI-PKLQQLLQDFFL---------GKNLCRHINADEAVATGA 382 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~-~~l~~~l~~~~~---------~~~v~~~~~p~~ava~Ga 382 (428)
++++...+.+...+...+.-. +++.|+|.||.+.. +.+.+.+++.+. ..++....-... .+.||
T Consensus 336 ~il~~~~~~L~~~i~~l~~~l-----dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GA 409 (429)
T 1z05_A 336 DVIQQLGRYLGAAIAIVINLF-----NPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPG 409 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----CCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHH
Confidence 344444445555555555543 35689999998763 555555555441 233444434445 78899
Q ss_pred HHHHHH
Q 014219 383 AIQAAI 388 (428)
Q Consensus 383 ~~~~~~ 388 (428)
+.++..
T Consensus 410 a~l~~~ 415 (429)
T 1z05_A 410 AALIKQ 415 (429)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887643
No 70
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=96.03 E-value=0.02 Score=55.71 Aligned_cols=80 Identities=19% Similarity=0.164 Sum_probs=56.0
Q ss_pred eHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCC-CeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHH
Q 014219 307 TRARFE-QLNMDLFEKCIEHVDTCLAKAKIDRTAV-DDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAI 384 (428)
Q Consensus 307 ~~~~~~-~~~~~~i~~i~~~i~~~l~~~~~~~~~i-~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~ 384 (428)
++.++. .+++.+.-.+...+...-+..+. .+ +.|.++||+++++.+.+.+...+ +.+|.++. +.++.|.|||+
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~~-~~e~~alGaA~ 450 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVSK-YKEVTSLGAAV 450 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEES-CSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHH-CCeEEecC-CCcchHHHHHH
Confidence 444443 33444444444444333222332 35 68999999999999999999999 88887764 45589999999
Q ss_pred HHHHhcC
Q 014219 385 QAAILSG 391 (428)
Q Consensus 385 ~~~~~~~ 391 (428)
.++.-.|
T Consensus 451 la~~~~G 457 (503)
T 2w40_A 451 LAGLEVK 457 (503)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 9998877
No 71
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=95.97 E-value=0.14 Score=45.08 Aligned_cols=21 Identities=19% Similarity=0.474 Sum_probs=18.2
Q ss_pred eEEEEeccCceEEEEEEeCCe
Q 014219 7 VAIGIDLGTTYSCVAVWQHDK 27 (428)
Q Consensus 7 ~~vgID~Gt~~~~va~~~~~~ 27 (428)
+++.||+|+|+++.++++++.
T Consensus 1 MlL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 1 MIFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred CEEEEEECcCcEEEEEEECCE
Confidence 368999999999999998664
No 72
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=95.95 E-value=1.4 Score=43.11 Aligned_cols=192 Identities=13% Similarity=0.150 Sum_probs=96.8
Q ss_pred ccCeEEEEe-CCCCCHHHHHH--HHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEE
Q 014219 141 AVTNAVITV-PAYFSDSQRQA--TEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVS 217 (428)
Q Consensus 141 ~~~~~vitv-P~~~~~~~~~~--l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~ 217 (428)
+++.+.+|. |-.++....-. -+..+...+++.+ -++.-.|-+++....... ... +++-+.||+|.+.
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~-~v~h~~aH~~~~~~~~~~--------~~p-~~l~vsGg~t~~~ 141 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPII-GVNHCIAHIEIGKLTTEA--------EDP-LTLYVSGGNTQVI 141 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEE-EEEHHHHHHHHHHHHSSC--------SSC-EEEEECSSCEEEE
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCee-EeccHHHHHHHHHHhcCC--------CCC-cEEEEcCCCcEEE
Confidence 467787776 76555432211 1223333466554 456666666665544322 112 5555667777775
Q ss_pred EEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeEEEeecc
Q 014219 218 LLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLY 297 (428)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l~~~~~~~~~~~~~~ 297 (428)
.+. .+.+++++.... .--|+.+|..- +.+ +...+..+ .+...+++. .. .+.++...
T Consensus 142 ~~~--~~~~~~lg~t~d-~s~G~~~D~~a-~~l--------gl~~~gg~----~ie~lA~~g------~~--~~~~p~~~ 197 (540)
T 3en9_A 142 AYV--SKKYRVFGETLD-IAVGNCLDQFA-RYV--------NLPHPGGP----YIEELARKG------KK--LVDLPYTV 197 (540)
T ss_dssp EEE--TTEEEEEEEBSS-SCHHHHHHHHH-HHT--------TCCSSCHH----HHHHHHHTC------CC--CCCCCCCE
T ss_pred EEe--CCceEEEeeccc-hHhHHHHHHHH-HHc--------CCCCCCHH----HHHHHHHcC------Cc--cCcCCCCC
Confidence 554 678888887663 44466666433 222 22222211 111111111 10 11111111
Q ss_pred cCcceeEE-------------eeHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhc
Q 014219 298 EGINFSST-------------ITRARFEQLNMD-LFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFF 363 (428)
Q Consensus 298 ~~~~~~~~-------------i~~~~~~~~~~~-~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~ 363 (428)
.+.++++. .+..++...|.. +++.+.+.+.++++..+ ++.|+|+||-+....|++.+.+.+
T Consensus 198 ~~~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 198 KGMDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp ETTEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred CCcceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 11111110 112333332322 34444555566666654 469999999999999999999977
Q ss_pred C--CCCcCCC
Q 014219 364 L--GKNLCRH 371 (428)
Q Consensus 364 ~--~~~v~~~ 371 (428)
. +.++..+
T Consensus 273 ~~~~~~~~~p 282 (540)
T 3en9_A 273 EGQNVDFYVP 282 (540)
T ss_dssp HHTTCEEECC
T ss_pred HhcCCEEEeC
Confidence 3 4455544
No 73
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=95.80 E-value=0.019 Score=55.71 Aligned_cols=76 Identities=20% Similarity=0.249 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCc
Q 014219 158 RQATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRL 237 (428)
Q Consensus 158 ~~~l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~ 237 (428)
.+.+..+-+..|++.-.+-.|-+|...+.+..... .....+|+|||||+|.+++++ ++.+. ...+.++
T Consensus 103 ~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~-------~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~l 170 (508)
T 3hi0_A 103 PDFIREAEAILGCEIEVLSGEKEALYSAYGVISGF-------YQPDGIAGDLGGGSLELIDIK--DKSCG---EGITLPL 170 (508)
T ss_dssp HHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHS-------SSCEEEEEEECSSCEEEEEEE--TTEEC---CCEEESC
T ss_pred HHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcC-------CCCCeEEEEeCCCceEEEEee--CCeee---eEEEecc
Confidence 44556666667987644444445544444332221 122349999999999999987 44322 3334789
Q ss_pred chHHHHHH
Q 014219 238 GGVDFNNR 245 (428)
Q Consensus 238 Gg~~id~~ 245 (428)
|.-.+.+.
T Consensus 171 G~vrl~e~ 178 (508)
T 3hi0_A 171 GGLRLSEQ 178 (508)
T ss_dssp CHHHHHHH
T ss_pred eEEehhhc
Confidence 99888764
No 74
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=95.73 E-value=0.091 Score=46.96 Aligned_cols=70 Identities=7% Similarity=-0.067 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCc--HHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcC
Q 014219 315 NMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRI--PKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSG 391 (428)
Q Consensus 315 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~--~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~ 391 (428)
...++++..+.+...+ .... ..++..|+|.||.++. +.|++.+++.. .++. .|..+...||+.++....+
T Consensus 212 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~--~~i~---~~~~a~~~GA~~la~~~~~ 283 (291)
T 1zbs_A 212 VYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRG--LTLG---SVLQSPMEGLIQYHHNNHV 283 (291)
T ss_dssp HHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTT--CCEE---EEESCSHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcC--Ceec---ccCcCHHHHHHHHHHhhhh
Confidence 3334444444444444 2211 1256789999998876 66666666643 2232 2446788899999876544
No 75
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=95.71 E-value=1.1 Score=40.11 Aligned_cols=64 Identities=14% Similarity=0.046 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcC--cHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHH
Q 014219 315 NMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSR--IPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAI 388 (428)
Q Consensus 315 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~--~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~ 388 (428)
...++++..+.+...+...-.. ++..|+|.||.+. .+.+.+.+++.+ .. |..+.+.||++++..
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~~--~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~~---~~~~~~~GAa~la~~ 293 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDPQ--DELPVALCGGLGQALRDWLPPGFRQRL-----VA---PQGDSAQGALLLLQR 293 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT--CCSCEEEESHHHHHTGGGSCHHHHHHC-----CC---CSSCHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CCCeEEEECCchHhHHHHHHHHHHhhc-----cC---CCCCHHHHHHHHHhh
Confidence 3344555555555555544322 5678999999865 466777777754 11 446678999988743
No 76
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.70 E-value=0.016 Score=56.27 Aligned_cols=80 Identities=18% Similarity=0.070 Sum_probs=53.5
Q ss_pred EeeHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHH
Q 014219 305 TITRARFE-QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAA 383 (428)
Q Consensus 305 ~i~~~~~~-~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~ 383 (428)
.-++.++. .+++.+.-.+...++..-+..+. .++.|.++||+++++.+.+.+...+ +.+|..+. .++.|.||+
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa 434 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNI 434 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHH
Confidence 33555543 33444444444444333222332 3678999999999999999999999 88887664 588999996
Q ss_pred HHHHHhc
Q 014219 384 IQAAILS 390 (428)
Q Consensus 384 ~~~~~~~ 390 (428)
+.+..-.
T Consensus 435 ~~A~~a~ 441 (489)
T 2uyt_A 435 GIQLMTL 441 (489)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 6665543
No 77
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.15 E-value=2 Score=39.74 Aligned_cols=72 Identities=13% Similarity=0.055 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCc-HHHHHHHHhhcC-------CCCcCCCCChhhHHHhHHH
Q 014219 312 EQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRI-PKLQQLLQDFFL-------GKNLCRHINADEAVATGAA 383 (428)
Q Consensus 312 ~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~-~~l~~~l~~~~~-------~~~v~~~~~p~~ava~Ga~ 383 (428)
.++++...+.+...+...+... +++.|+|.||.+.. +.+.+.+++.+. ..++........+.+.||+
T Consensus 292 ~~~l~~~~~~La~~i~~l~~~l-----dP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa 366 (380)
T 2hoe_A 292 KEYFDDIARYFSIGLLNLIHLF-----GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAA 366 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHH
Confidence 3455555555556665555554 35689999998864 667666666552 1234444445568999999
Q ss_pred HHHHH
Q 014219 384 IQAAI 388 (428)
Q Consensus 384 ~~~~~ 388 (428)
.++..
T Consensus 367 ~l~~~ 371 (380)
T 2hoe_A 367 VHALE 371 (380)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87643
No 78
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=94.77 E-value=0.15 Score=46.81 Aligned_cols=49 Identities=16% Similarity=0.201 Sum_probs=27.5
Q ss_pred eEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEE
Q 014219 172 VLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLA 220 (428)
Q Consensus 172 ~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~ 220 (428)
.+.+++-.+=+.+.+..-...-........++++++|+|||+|.+++..
T Consensus 110 ~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 110 EAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred eEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 4567765544444443211110000001234699999999999999873
No 79
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=94.50 E-value=2.5 Score=37.81 Aligned_cols=69 Identities=23% Similarity=0.250 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCc-----HHHHHHHHhhcC------CCCcCCCCChhhHHHhHHHH
Q 014219 316 MDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRI-----PKLQQLLQDFFL------GKNLCRHINADEAVATGAAI 384 (428)
Q Consensus 316 ~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~-----~~l~~~l~~~~~------~~~v~~~~~p~~ava~Ga~~ 384 (428)
...++.+...+...+.-. +++.|+|-||.+.. +.+++.+++.+. ..++....-...+.+.||+.
T Consensus 221 ~~~~~~~a~~la~l~~~~-----dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~ 295 (310)
T 3htv_A 221 QSLLENAARAIATSINLF-----DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAI 295 (310)
T ss_dssp HHHHHHHHHHHHHHHHHH-----CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh-----CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHH
Confidence 334444444454444442 45789999998865 457777777652 12344444556789999998
Q ss_pred HHHHh
Q 014219 385 QAAIL 389 (428)
Q Consensus 385 ~~~~~ 389 (428)
++...
T Consensus 296 la~~~ 300 (310)
T 3htv_A 296 LAHQR 300 (310)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88553
No 80
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=94.38 E-value=0.12 Score=47.16 Aligned_cols=69 Identities=14% Similarity=0.099 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCC----ChhhHHHhHHHHHHHHhcC
Q 014219 320 EKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHI----NADEAVATGAAIQAAILSG 391 (428)
Q Consensus 320 ~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~----~p~~ava~Ga~~~~~~~~~ 391 (428)
+-....|.+.++.... .++.|+++||+++.|.|.++|++.+++.+|..++ +|+.--|..-|++|.+...
T Consensus 267 ~~TA~sIa~~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~l~ 339 (371)
T 3qbx_A 267 ELSARSISESLLDAQP---DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHRFLE 339 (371)
T ss_dssp HHHHHHHHHHHHHHCT---TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccC---CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHHHHc
Confidence 3333444455544332 3578999999999999999999999766554333 3555556666677766533
No 81
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=93.78 E-value=0.016 Score=45.15 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=24.1
Q ss_pred CcceEEeecccceeeeEEcCCcccEEEeCCCC
Q 014219 397 AEDLVILDLKPCSHEPKIATGSNPSLLICNHL 428 (428)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (428)
.+++.+.+++|+|+|++..+|.+.+|||||++
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~ 45 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTT 45 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCe
Confidence 46778999999999999999999999999985
No 82
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=93.74 E-value=3.9 Score=37.12 Aligned_cols=52 Identities=21% Similarity=0.237 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEE
Q 014219 158 RQATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLA 220 (428)
Q Consensus 158 ~~~l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~ 220 (428)
++.+++. .+++ +.+..+..|++++....... +...+++++-+|.| .-.+++.
T Consensus 124 ~~~l~~~---~~~p-v~v~NDa~aaal~E~~~g~~------~~~~~~v~i~~GtG-iG~gii~ 175 (343)
T 2yhw_A 124 RTPLSDT---LHLP-VWVDNDGNCAALAERKFGQG------KGLENFVTLITGTG-IGGGIIH 175 (343)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHTSTT------TTCSCEEEEEESSS-EEEEEEE
T ss_pred HHHHHHH---HCCC-EEEechhHHHHHHHHHhCCC------CCCCcEEEEEECCC-EEEEEEE
Confidence 3445444 3665 78899999999886543221 12456788888877 4455443
No 83
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=93.10 E-value=0.075 Score=51.17 Aligned_cols=72 Identities=11% Similarity=-0.003 Sum_probs=54.1
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhh-cCCCCcCCCCChhhHHHhHHHHHHHH
Q 014219 312 EQLNMDLFEK--CIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDF-FLGKNLCRHINADEAVATGAAIQAAI 388 (428)
Q Consensus 312 ~~~~~~~i~~--i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~-~~~~~v~~~~~p~~ava~Ga~~~~~~ 388 (428)
..+++-+++. +.-.+.+.++.... .+.|.++||+++++.+.+.+... | +.+|.++.. .++.|.|||++|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~~-~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTANA-HNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEESS-CCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcCC-CchHHHHHHHHhCc
Confidence 3444445553 55555666665432 26899999999999999999999 9 899888855 45788999999987
Q ss_pred h
Q 014219 389 L 389 (428)
Q Consensus 389 ~ 389 (428)
-
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 5
No 84
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=90.89 E-value=0.52 Score=43.05 Aligned_cols=69 Identities=16% Similarity=0.172 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCC----CChhhHHHhHHHHHHHHh
Q 014219 317 DLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRH----INADEAVATGAAIQAAIL 389 (428)
Q Consensus 317 ~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~----~~p~~ava~Ga~~~~~~~ 389 (428)
-+.+=....|.+.+++.. ..+.|+++||+++.|.|.++|++.+++.+|... .+|+.--|..-|++|.+.
T Consensus 271 TLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~~ 343 (370)
T 3cqy_A 271 TLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMRY 343 (370)
T ss_dssp HHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHHH
Confidence 333334444555554432 245899999999999999999999976544322 234444444445666554
No 85
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=90.37 E-value=1.8 Score=41.12 Aligned_cols=20 Identities=20% Similarity=0.383 Sum_probs=17.0
Q ss_pred ceEEEEEEecCcceEEEEEE
Q 014219 201 VKNVLIFDLGGGTFDVSLLA 220 (428)
Q Consensus 201 ~~~~lvvDiG~~t~d~~~~~ 220 (428)
...++++|+|||+|.+++..
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 34589999999999999874
No 86
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=90.15 E-value=1 Score=42.76 Aligned_cols=55 Identities=11% Similarity=0.003 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHcCCc--eEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEE
Q 014219 156 SQRQATEDAATQCGLQ--VLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLA 220 (428)
Q Consensus 156 ~~~~~l~~a~~~ag~~--~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~ 220 (428)
.-++.|++++.+.|++ .+.++....|++++..+.. ...++.+=+|-|+=-..+..
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~----------~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD----------AXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC----------TTEEEEEEESSSEEEEEEEC
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC----------CccEEEEEECcEEEEEEEEC
Confidence 4467888888777764 4889999999999887732 33556666776644444443
No 87
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=88.81 E-value=1.4 Score=44.81 Aligned_cols=63 Identities=16% Similarity=0.248 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcC--CCCcCCCCC---hhhHHHhHHHHHHHHh
Q 014219 322 CIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFL--GKNLCRHIN---ADEAVATGAAIQAAIL 389 (428)
Q Consensus 322 i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~--~~~v~~~~~---p~~ava~Ga~~~~~~~ 389 (428)
+.+.+....++. .++.|+|+||-+....|++.+.+.+. +.++..+.. -+..+|.|.|++|+..
T Consensus 693 L~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 693 FAHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 344444554443 35689999999999999999999884 456655533 3778999988887664
No 88
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=88.67 E-value=3.6 Score=36.60 Aligned_cols=71 Identities=10% Similarity=0.021 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHH----HHHHHHhhcCC------------CCcCCCCChhhH
Q 014219 314 LNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPK----LQQLLQDFFLG------------KNLCRHINADEA 377 (428)
Q Consensus 314 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~----l~~~l~~~~~~------------~~v~~~~~p~~a 377 (428)
+++...+.+...+...+.-. +++.|+|-||.++.+. +++.+++.+.. ..+....-...+
T Consensus 204 ~~~~~~~~La~~i~nl~~~l-----dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a 278 (302)
T 3epq_A 204 VWELEGYYIAQALAQYILIL-----APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNA 278 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-----CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHH-----CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChH
Confidence 44445555556666666653 4568999999887654 44455544311 124455556679
Q ss_pred HHhHHHHHHHHh
Q 014219 378 VATGAAIQAAIL 389 (428)
Q Consensus 378 va~Ga~~~~~~~ 389 (428)
.+.||+.++...
T Consensus 279 ~l~GAa~l~~~~ 290 (302)
T 3epq_A 279 GIIGTLVLAHQA 290 (302)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999887543
No 89
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=88.32 E-value=1.9 Score=42.74 Aligned_cols=64 Identities=16% Similarity=0.167 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCC---CChhhHHHhHHHHHHHH
Q 014219 320 EKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRH---INADEAVATGAAIQAAI 388 (428)
Q Consensus 320 ~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~---~~p~~ava~Ga~~~~~~ 388 (428)
+.+.+.+.++.+.. .++.|+|+||-++..+|++.+.+.+.+.++..+ +--+.++|.|-+++++.
T Consensus 585 ~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 585 QGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 33444444444443 356999999999999999999998855544332 23367899999988854
No 90
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=87.99 E-value=21 Score=34.80 Aligned_cols=80 Identities=16% Similarity=0.136 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCC-ChhhHHHhHHHHH
Q 014219 308 RARFEQLNMDLF-EKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHI-NADEAVATGAAIQ 385 (428)
Q Consensus 308 ~~~~~~~~~~~i-~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~-~p~~ava~Ga~~~ 385 (428)
..++...|...+ +-+.+.+....+..+ ++.|+|+||-+....+++.+.+..+-..+..++ --+.+++.|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 455555454433 334455555555543 569999999999999999998875222443332 3457899999999
Q ss_pred HHHhcCC
Q 014219 386 AAILSGV 392 (428)
Q Consensus 386 ~~~~~~~ 392 (428)
+....+.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9888764
No 91
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=87.69 E-value=15 Score=32.94 Aligned_cols=54 Identities=24% Similarity=0.337 Sum_probs=32.4
Q ss_pred HHcCCceEeeechhHHHHHHhhccccccC---Cc-cccCceEEEEEEecCcceEEEEEE
Q 014219 166 TQCGLQVLKIIAEPTAAAIAYGLDRQQQG---GI-AASGVKNVLIFDLGGGTFDVSLLA 220 (428)
Q Consensus 166 ~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~---~~-~~~~~~~~lvvDiG~~t~d~~~~~ 220 (428)
+..|++.+.+..+..|++++........+ .. ..+...+++++-+|.|- -.+++.
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi-G~giv~ 156 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL-GVAHLV 156 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE-EEEEEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc-eEEEEe
Confidence 34488888999999999998764311100 00 01224567888888774 344443
No 92
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=87.39 E-value=1.9 Score=43.58 Aligned_cols=67 Identities=18% Similarity=0.206 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcC--CCCcCCCC-Ch--hhHHHhHHHHHHHHhcC
Q 014219 320 EKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFL--GKNLCRHI-NA--DEAVATGAAIQAAILSG 391 (428)
Q Consensus 320 ~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~--~~~v~~~~-~p--~~ava~Ga~~~~~~~~~ 391 (428)
+.+.+.+.++.+..+ ++.|+|+||-+...+|++.+.+.+. +.++..+. -| +.++|.|.++++.....
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 333444444444433 5699999999999999999998873 44444322 33 67899999999877655
No 93
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=86.59 E-value=0.47 Score=46.23 Aligned_cols=23 Identities=35% Similarity=0.453 Sum_probs=19.3
Q ss_pred CCceEEEEeccCceEEEEEEeCC
Q 014219 4 KAGVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 4 ~~~~~vgID~Gt~~~~va~~~~~ 26 (428)
+++++||||+|||+++++..+.+
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~~ 24 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDHD 24 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECTT
T ss_pred CceEEEEEEccccceeeeEEcCC
Confidence 46899999999999999988543
No 94
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=85.94 E-value=7.8 Score=35.53 Aligned_cols=20 Identities=20% Similarity=0.262 Sum_probs=18.3
Q ss_pred CceEEEEeccCceEEEEEEe
Q 014219 5 AGVAIGIDLGTTYSCVAVWQ 24 (428)
Q Consensus 5 ~~~~vgID~Gt~~~~va~~~ 24 (428)
..+++|||+|.++++++..+
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d 27 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQ 27 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEE
T ss_pred CCEEEEEEECcceEEEEEEE
Confidence 47899999999999999887
No 95
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=85.94 E-value=6.4 Score=37.50 Aligned_cols=56 Identities=11% Similarity=0.104 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHcCCc--eEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEE
Q 014219 155 DSQRQATEDAATQCGLQ--VLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLA 220 (428)
Q Consensus 155 ~~~~~~l~~a~~~ag~~--~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~ 220 (428)
..-.+.|++++++-|++ .+.++....|++++..+.. ....+-+=+|-|+=-+.+.+
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~----------~~~~iglIlGTG~N~~y~e~ 242 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD----------PQTKMGIIIGTGVNGAYYDV 242 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC----------TTEEEEEEESSSEEEEEEEE
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC----------CCcEEEEEEecCcceEEEee
Confidence 33477899999998885 3678999999999876653 23445555665554444443
No 96
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=84.04 E-value=0.9 Score=44.06 Aligned_cols=23 Identities=26% Similarity=0.225 Sum_probs=19.6
Q ss_pred CCCCCceEEEEeccCceEEEEEEe
Q 014219 1 MAGKAGVAIGIDLGTTYSCVAVWQ 24 (428)
Q Consensus 1 m~~~~~~~vgID~Gt~~~~va~~~ 24 (428)
|+. .++++|||+|||+++++..+
T Consensus 1 m~~-~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 1 MSL-RTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp -CC-SCEEEEEEECSSEEEEEEEE
T ss_pred CCC-CcEEEEEEeccccEEEEEEE
Confidence 744 57999999999999999997
No 97
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=83.01 E-value=0.92 Score=44.49 Aligned_cols=25 Identities=32% Similarity=0.442 Sum_probs=19.0
Q ss_pred CCCCCceEEEEeccCceEEEEEEeCC
Q 014219 1 MAGKAGVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 1 m~~~~~~~vgID~Gt~~~~va~~~~~ 26 (428)
|+. .+++||||+|||+++++..+.+
T Consensus 1 m~~-~~~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 1 MSL-ASYFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp ----CCEEEEEEECSSEEEEEEEETT
T ss_pred CCC-CcEEEEEEECcccEEEEEECCC
Confidence 654 4699999999999999988543
No 98
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=82.90 E-value=4.1 Score=38.60 Aligned_cols=55 Identities=11% Similarity=0.139 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHcCCc--eEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEE
Q 014219 155 DSQRQATEDAATQCGLQ--VLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLL 219 (428)
Q Consensus 155 ~~~~~~l~~a~~~ag~~--~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~ 219 (428)
..-.+.|++++.+.|++ .+.++....|++++..+.. ....+-+=+|-|+=-+.+.
T Consensus 172 ~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~----------~~~~iglIlGTG~na~yve 228 (451)
T 1bdg_A 172 HNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED----------PKCAVGLIVGTGTNVAYIE 228 (451)
T ss_dssp SBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC----------TTEEEEEEESSSEEEEEEE
T ss_pred CcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC----------CCcEEEEEEeCCcceEEEE
Confidence 44578889999887875 2489999999999877663 2345555566664333333
No 99
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=82.82 E-value=0.98 Score=43.73 Aligned_cols=26 Identities=27% Similarity=0.349 Sum_probs=18.7
Q ss_pred CCCC-CceEEEEeccCceEEEEEEeCC
Q 014219 1 MAGK-AGVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 1 m~~~-~~~~vgID~Gt~~~~va~~~~~ 26 (428)
|+.. .++++|||+|||+++++..+.+
T Consensus 1 ~~~~~~~~~lgIDiGtts~k~~l~d~~ 27 (508)
T 3ifr_A 1 MSLAQGRQVIGLDIGTTSTIAILVRLP 27 (508)
T ss_dssp ------CEEEEEEECSSEEEEEEEETT
T ss_pred CCcccCCEEEEEEecCcceEEEEECCC
Confidence 5443 3689999999999999998643
No 100
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=82.29 E-value=0.97 Score=44.14 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=18.5
Q ss_pred ceEEEEeccCceEEEEEEeCC
Q 014219 6 GVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~~ 26 (428)
++++|||+||++++++..+.+
T Consensus 10 ~~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CEEEEEEEcCcCEEEEEECCC
Confidence 589999999999999988643
No 101
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=82.28 E-value=1.1 Score=43.26 Aligned_cols=25 Identities=32% Similarity=0.460 Sum_probs=20.0
Q ss_pred CCCCCceEEEEeccCceEEEEEEeCC
Q 014219 1 MAGKAGVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 1 m~~~~~~~vgID~Gt~~~~va~~~~~ 26 (428)
|++ .++++|||+|||+++++..+.+
T Consensus 1 m~~-~~~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 1 MAE-KNYVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp -CC-CCEEEEEEECSSEEEEEEEETT
T ss_pred CCC-CCEEEEEEcCCCceEEEEECCC
Confidence 643 4699999999999999998543
No 102
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=81.91 E-value=0.94 Score=44.62 Aligned_cols=24 Identities=25% Similarity=0.320 Sum_probs=18.4
Q ss_pred CCCCCceEEEEeccCceEEEEEEeC
Q 014219 1 MAGKAGVAIGIDLGTTYSCVAVWQH 25 (428)
Q Consensus 1 m~~~~~~~vgID~Gt~~~~va~~~~ 25 (428)
|+. .+++||||+|||+++++..+.
T Consensus 1 m~~-~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 1 MSL-TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -----CEEEEEEECSSEEEEEEEET
T ss_pred CCC-CCEEEEEecCCcceEEEEEEC
Confidence 643 469999999999999999964
No 103
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=81.70 E-value=1.1 Score=43.36 Aligned_cols=24 Identities=29% Similarity=0.452 Sum_probs=19.4
Q ss_pred CCCCCceEEEEeccCceEEEEEEeCC
Q 014219 1 MAGKAGVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 1 m~~~~~~~vgID~Gt~~~~va~~~~~ 26 (428)
|+ .++++|||+|||+++++..+.+
T Consensus 1 M~--m~~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 1 MS--LKYIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp -C--CEEEEEEEECSSEEEEEEEETT
T ss_pred CC--CCEEEEEEecCCceEEEEEcCC
Confidence 64 3689999999999999988544
No 104
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=81.25 E-value=1.3 Score=32.03 Aligned_cols=20 Identities=20% Similarity=0.180 Sum_probs=17.4
Q ss_pred eEEEEeccCceEEEEEEeCC
Q 014219 7 VAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 7 ~~vgID~Gt~~~~va~~~~~ 26 (428)
.++|||+|+-.+.+|+.+..
T Consensus 2 riLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CEEEEEESSSEEEEEEECSC
T ss_pred cEEEEEeCCCEEEEEEEeCC
Confidence 48999999999999988543
No 105
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=80.85 E-value=0.92 Score=43.56 Aligned_cols=25 Identities=44% Similarity=0.674 Sum_probs=16.6
Q ss_pred CCCCCceEEEEeccCceEEEEEEeC
Q 014219 1 MAGKAGVAIGIDLGTTYSCVAVWQH 25 (428)
Q Consensus 1 m~~~~~~~vgID~Gt~~~~va~~~~ 25 (428)
|+...++++|||+|||+++++..+.
T Consensus 1 m~~mm~~~lgIDiGTts~Ka~l~d~ 25 (482)
T 3h6e_A 1 MSLSTGATIVIDLGKTLSKVSLWDL 25 (482)
T ss_dssp -------CEEEEECSSEEEEEEECT
T ss_pred CchhhceEEEEEcCCCCeEEEEEEC
Confidence 4333458999999999999998853
No 106
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=79.82 E-value=5.7 Score=36.70 Aligned_cols=72 Identities=17% Similarity=0.092 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHH-HHHHHHhhcCCC---CcCCCCChhhHHHhHHHHHHH
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPK-LQQLLQDFFLGK---NLCRHINADEAVATGAAIQAA 387 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~-l~~~l~~~~~~~---~v~~~~~p~~ava~Ga~~~~~ 387 (428)
.+++.....+...+...+.... .+++.|+|.||.+...- +.+.+++.+... .+........+.+.||+.++.
T Consensus 272 ~~l~~~~~~la~~i~~l~~~l~---~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 272 RVYRAMAYQIAKWIGKMAAVLK---GEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---TCCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---CCCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 3455555555555555555541 24679999999887543 778888877432 334444445699999998863
No 107
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=79.75 E-value=1.4 Score=34.79 Aligned_cols=21 Identities=33% Similarity=0.311 Sum_probs=18.3
Q ss_pred ceEEEEeccCceEEEEEEeCC
Q 014219 6 GVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~~ 26 (428)
+.++|||+|+..+++|+.+..
T Consensus 3 mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEEccCCEEEEEEEECC
Confidence 679999999999999988543
No 108
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=78.92 E-value=3.8 Score=36.09 Aligned_cols=70 Identities=19% Similarity=0.142 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCC------CcCCCCChhhHHHhHHHHHH
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGK------NLCRHINADEAVATGAAIQA 386 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~------~v~~~~~p~~ava~Ga~~~~ 386 (428)
++++...+.+...+...+...+ ++.|+|.||.+..+.+.+.+++.+... ++........+.+.||+.++
T Consensus 212 ~i~~~~~~~L~~~i~~l~~~l~-----p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 212 QLIHRSARTLARLIADIKATTD-----CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-----CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-----CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 4455555555555555555543 458999999887778888888777421 23344455668999999876
Q ss_pred H
Q 014219 387 A 387 (428)
Q Consensus 387 ~ 387 (428)
.
T Consensus 287 ~ 287 (289)
T 2aa4_A 287 Q 287 (289)
T ss_dssp H
T ss_pred h
Confidence 3
No 109
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=78.10 E-value=4.1 Score=37.75 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCc-CcHHHHHHHHhhcC--C-------------------------
Q 014219 314 LNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSS-RIPKLQQLLQDFFL--G------------------------- 365 (428)
Q Consensus 314 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s-~~~~l~~~l~~~~~--~------------------------- 365 (428)
+++-.+.+|...|-...... ..+|.|+||||-+ +++.+++.+.+.+. +
T Consensus 309 A~d~f~yri~k~IGa~aa~L----ggvDaIVFTgGIGEns~~vR~~i~~~l~~lGi~lD~~~N~~~~~~~~~~Is~~~s~ 384 (415)
T 2e1z_A 309 AIKTFVHRIARHIAGHAASL----HRLDGIIFTGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANPSQ 384 (415)
T ss_dssp HHHHHHHHHHHHHHHHHTTC----SSCCEEEEEHHHHHHCHHHHHHHHHTTGGGTCCBCHHHHHSCGGGCSEECBCTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCCEEEECccccccCHHHHHHHHhhHhhcCccccHhHhcccccCCCceeeCCCCC
Confidence 44445555555555544443 3589999999999 99999999998773 2
Q ss_pred -CCcCCCCChhhHHHhHHHHHH
Q 014219 366 -KNLCRHINADEAVATGAAIQA 386 (428)
Q Consensus 366 -~~v~~~~~p~~ava~Ga~~~~ 386 (428)
.-.+.|-|-+.++|+++....
T Consensus 385 v~V~ViPtnEEl~IA~~~~~ll 406 (415)
T 2e1z_A 385 VICAVIPTNEEKMIALDAIHLG 406 (415)
T ss_dssp SEEEECCCCHHHHHHHHHHHHT
T ss_pred ceEEEECChHHHHHHHHHHHHh
Confidence 012345566778888887653
No 110
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=77.62 E-value=1.8 Score=41.98 Aligned_cols=21 Identities=33% Similarity=0.403 Sum_probs=18.5
Q ss_pred CceEEEEeccCceEEEEEEeC
Q 014219 5 AGVAIGIDLGTTYSCVAVWQH 25 (428)
Q Consensus 5 ~~~~vgID~Gt~~~~va~~~~ 25 (428)
.++++|||+|||+++++..+.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEEcCCcceEEEEECC
Confidence 468999999999999999854
No 111
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=77.56 E-value=25 Score=32.99 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=26.2
Q ss_pred HHHHHHHHHHcC---CceEeeechhHHHHHHhhccc
Q 014219 158 RQATEDAATQCG---LQVLKIIAEPTAAAIAYGLDR 190 (428)
Q Consensus 158 ~~~l~~a~~~ag---~~~v~~~~E~~Aaa~~~~~~~ 190 (428)
.+.|++++.+-+ ++.+.++....|+.++..+..
T Consensus 163 ~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~ 198 (445)
T 3hm8_A 163 VSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED 198 (445)
T ss_dssp HHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC
Confidence 678888988764 456889999999999876654
No 112
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=76.68 E-value=17 Score=37.82 Aligned_cols=56 Identities=9% Similarity=0.144 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHHHc-CC--ceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEE
Q 014219 154 SDSQRQATEDAATQC-GL--QVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLL 219 (428)
Q Consensus 154 ~~~~~~~l~~a~~~a-g~--~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~ 219 (428)
...-.+.|++++.+- ++ ..+.++....|++++..+.. ....+-+=+|-|+=-+.+.
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~----------~~~~iglIlGTG~na~y~e 688 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE----------PTCEVGLIVGTGSNACYME 688 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC----------TTEEEEEEESSSEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC----------CCcEEEEEEeCCeeEEEEE
Confidence 344577888888754 44 58999999999999877663 2345555566555444333
No 113
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=76.16 E-value=3.3 Score=31.99 Aligned_cols=21 Identities=38% Similarity=0.387 Sum_probs=18.5
Q ss_pred ceEEEEeccCceEEEEEEeCC
Q 014219 6 GVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~~ 26 (428)
..++|||+|+..+.+|+.+..
T Consensus 3 ~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETT
T ss_pred CeEEEEEeCCCEEEEEEEcCC
Confidence 469999999999999999664
No 114
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=75.75 E-value=1.7 Score=41.75 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=17.9
Q ss_pred CceEEEEeccCceEEEEEEe
Q 014219 5 AGVAIGIDLGTTYSCVAVWQ 24 (428)
Q Consensus 5 ~~~~vgID~Gt~~~~va~~~ 24 (428)
.++++|||+|||+++++..+
T Consensus 3 ~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEE
Confidence 46799999999999999884
No 115
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=75.58 E-value=2.1 Score=41.25 Aligned_cols=20 Identities=30% Similarity=0.395 Sum_probs=18.1
Q ss_pred ceEEEEeccCceEEEEEEeC
Q 014219 6 GVAIGIDLGTTYSCVAVWQH 25 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~ 25 (428)
+++||||+|||+++++..+.
T Consensus 6 ~~~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEeCccceEEEEEcC
Confidence 58999999999999999854
No 116
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=75.12 E-value=2.2 Score=41.39 Aligned_cols=20 Identities=35% Similarity=0.499 Sum_probs=18.0
Q ss_pred ceEEEEeccCceEEEEEEeC
Q 014219 6 GVAIGIDLGTTYSCVAVWQH 25 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~ 25 (428)
+++||||+|||+++++..+.
T Consensus 26 ~~~lgIDiGtts~k~~l~d~ 45 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDG 45 (520)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred CeEEEEEeCCcceEEEEECC
Confidence 58999999999999999853
No 117
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=74.93 E-value=2.4 Score=41.06 Aligned_cols=22 Identities=32% Similarity=0.212 Sum_probs=18.8
Q ss_pred CceEEEEeccCceEEEEEEeCC
Q 014219 5 AGVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 5 ~~~~vgID~Gt~~~~va~~~~~ 26 (428)
.++++|||+|||+++++..+.+
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTT
T ss_pred ccEEEEEEeCCCceEEEEECCC
Confidence 3589999999999999988543
No 118
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=73.49 E-value=7.8 Score=35.81 Aligned_cols=71 Identities=15% Similarity=0.085 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCc-CcHHHHHHHHhhcC--C------C-----------------
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSS-RIPKLQQLLQDFFL--G------K----------------- 366 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s-~~~~l~~~l~~~~~--~------~----------------- 366 (428)
.+++-.+.+|...|-......+ .+|.|+||||-+ +++.+++.+.+.+. + .
T Consensus 300 lA~d~f~yri~k~IGa~~a~Lg----gvDaiVFTgGIGEns~~vR~~i~~~l~~lGi~lD~~~N~~~~~~~~Is~~~s~v 375 (408)
T 1g99_A 300 LALEIFAYKVKKFIGEYSAVLN----GADAVVFTAGIGENSASIRKRILTGLDGIGIKIDDEKNKIRGQEIDISTPDAKV 375 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT----SCSEEEEEHHHHHHCHHHHHHHHTTCGGGTCCBCTTGGGCCSSCEECBCTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHhhC----CCCEEEECccccccCHHHHHHHHhhhhhhCccccHhhhhccCccceecCCCCCc
Confidence 3556666777777766666652 478999999999 99999999998773 2 0
Q ss_pred C-cCCCCChhhHHHhHHHHHHH
Q 014219 367 N-LCRHINADEAVATGAAIQAA 387 (428)
Q Consensus 367 ~-v~~~~~p~~ava~Ga~~~~~ 387 (428)
+ .+.|-|-..++|+++.....
T Consensus 376 ~V~ViPt~Eel~IA~~~~~~l~ 397 (408)
T 1g99_A 376 RVFVIPTNEELAIARETKEIVE 397 (408)
T ss_dssp EEEECCCCHHHHHHHHHHHHHH
T ss_pred eEEEECChHHHHHHHHHHHHHh
Confidence 1 23445668889999876653
No 119
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=72.87 E-value=30 Score=36.07 Aligned_cols=54 Identities=13% Similarity=0.225 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHcC-Cc--eEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEE
Q 014219 156 SQRQATEDAATQCG-LQ--VLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLL 219 (428)
Q Consensus 156 ~~~~~l~~a~~~ag-~~--~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~ 219 (428)
.-++.|++++.+.| ++ .+.++....|++++..+.. ...++.+=+|-|+=-..+.
T Consensus 184 ~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~----------~~~~iglilGTGvngg~i~ 240 (917)
T 1cza_N 184 DVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDD----------QHCEVGLIIGTGTNACYME 240 (917)
T ss_dssp BHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHC----------TTEEEEEEESSSEEEEEEE
T ss_pred chHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccC----------CCcEEEEEEECCcceEEEe
Confidence 34677888887766 54 6899999999999876652 3355666677664333333
No 120
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=72.51 E-value=2.5 Score=40.72 Aligned_cols=20 Identities=20% Similarity=0.386 Sum_probs=18.0
Q ss_pred ceEEEEeccCceEEEEEEeC
Q 014219 6 GVAIGIDLGTTYSCVAVWQH 25 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~ 25 (428)
++++|||+|||+++++..+.
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEecCCchhEEEEECC
Confidence 58999999999999999854
No 121
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=71.64 E-value=18 Score=34.44 Aligned_cols=57 Identities=18% Similarity=0.239 Sum_probs=38.2
Q ss_pred CceEEEEEEecCcceEEEEEEEeCC-----eEEEEEecCCCCcc-hHHHHHHHHHHHHHHHHh
Q 014219 200 GVKNVLIFDLGGGTFDVSLLAIENG-----VIRVRATDGNTRLG-GVDFNNRMVDYFVEEFKR 256 (428)
Q Consensus 200 ~~~~~lvvDiG~~t~d~~~~~~~~~-----~~~~~~~~~~~~~G-g~~id~~l~~~l~~~~~~ 256 (428)
+...++.+|+||+++-+++++..+. ..+..........| |..+-.-+++.+.+.+.+
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~ 140 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDE 140 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999999765 22223333434444 666666666666655544
No 122
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=71.52 E-value=21 Score=33.75 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=27.4
Q ss_pred HHHHHHHHHHcC---CceEeeechhHHHHHHhhccc
Q 014219 158 RQATEDAATQCG---LQVLKIIAEPTAAAIAYGLDR 190 (428)
Q Consensus 158 ~~~l~~a~~~ag---~~~v~~~~E~~Aaa~~~~~~~ 190 (428)
.+.|++|+++-| ++.+.++.+.+|..++..+..
T Consensus 187 v~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~ 222 (470)
T 3f9m_A 187 VGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED 222 (470)
T ss_dssp HHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC
Confidence 788999999987 367889999999999877654
No 123
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=68.91 E-value=6.5 Score=31.10 Aligned_cols=19 Identities=26% Similarity=0.482 Sum_probs=16.8
Q ss_pred ceEEEEeccCceEEEEEEe
Q 014219 6 GVAIGIDLGTTYSCVAVWQ 24 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~ 24 (428)
+.++|||.|++++..++.+
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 4699999999999999884
No 124
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=68.89 E-value=12 Score=33.26 Aligned_cols=51 Identities=18% Similarity=0.277 Sum_probs=31.5
Q ss_pred HHHHHHHHHHcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEE
Q 014219 158 RQATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLL 219 (428)
Q Consensus 158 ~~~l~~a~~~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~ 219 (428)
++.|++.+ |++ +.+..+..|+|++-...... +..++++++-+|.| .-.+++
T Consensus 90 ~~~l~~~~---~~p-V~v~NDanaaalaE~~~G~~------~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 90 LQTVXNEM---XIP-VGFSTDVNAAALGEFLFGEA------XGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHHHHHHH---CSC-EEEEEHHHHHHHHHHHHSTT------TTCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHHh---CCC-EEEechhHHHHHHHHHhCCC------CCCCcEEEEEECCc-eEEEEE
Confidence 34444433 775 78999999999986554322 12456788888765 344444
No 125
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=68.37 E-value=3.3 Score=39.98 Aligned_cols=21 Identities=24% Similarity=0.355 Sum_probs=18.2
Q ss_pred ceEEEEeccCceEEEEEEeCC
Q 014219 6 GVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~~ 26 (428)
++++|||+|||+++++..+.+
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEeCCcceEEEEECCC
Confidence 479999999999999998644
No 126
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=66.86 E-value=3.3 Score=39.83 Aligned_cols=21 Identities=24% Similarity=0.379 Sum_probs=17.7
Q ss_pred ceEEEEeccCceEEEEEEeCC
Q 014219 6 GVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~~ 26 (428)
++++|||+|||+++++..+.+
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEeeCCcceEEEEECCC
Confidence 378999999999999998543
No 127
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=65.87 E-value=9.6 Score=35.92 Aligned_cols=50 Identities=22% Similarity=0.274 Sum_probs=28.9
Q ss_pred ceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEE
Q 014219 171 QVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLA 220 (428)
Q Consensus 171 ~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~ 220 (428)
..+.+++..+=+.++++.-...-..+.......+.++|+||++|.+++..
T Consensus 150 ~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 150 QGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred CceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 46888886665555553321110000000235678999999999998764
No 128
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=65.83 E-value=4 Score=39.40 Aligned_cols=21 Identities=38% Similarity=0.523 Sum_probs=18.2
Q ss_pred ceEEEEeccCceEEEEEEeCC
Q 014219 6 GVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~~ 26 (428)
++++|||+|||+++++..+.+
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEecCCcceEEEEECCC
Confidence 479999999999999998543
No 129
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=63.64 E-value=4.7 Score=38.60 Aligned_cols=19 Identities=42% Similarity=0.532 Sum_probs=16.6
Q ss_pred eEEEEeccCceEEEEEEeC
Q 014219 7 VAIGIDLGTTYSCVAVWQH 25 (428)
Q Consensus 7 ~~vgID~Gt~~~~va~~~~ 25 (428)
+++|||+|||+++++..+.
T Consensus 1 ~~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp CEEEEEECSSEEEEEEECT
T ss_pred CEEEEEecCcccEEEEECC
Confidence 3699999999999999853
No 130
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=62.95 E-value=6 Score=31.58 Aligned_cols=19 Identities=37% Similarity=0.305 Sum_probs=16.9
Q ss_pred ceEEEEeccCceEEEEEEe
Q 014219 6 GVAIGIDLGTTYSCVAVWQ 24 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~ 24 (428)
|.++|||.|++.+..++.+
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 4799999999999999884
No 131
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=62.31 E-value=44 Score=31.51 Aligned_cols=56 Identities=14% Similarity=0.114 Sum_probs=37.4
Q ss_pred CceEEEEEEecCcceEEEEEEEeCCe---EEEEEecCCCCc---chHHHHHHHHHHHHHHHH
Q 014219 200 GVKNVLIFDLGGGTFDVSLLAIENGV---IRVRATDGNTRL---GGVDFNNRMVDYFVEEFK 255 (428)
Q Consensus 200 ~~~~~lvvDiG~~t~d~~~~~~~~~~---~~~~~~~~~~~~---Gg~~id~~l~~~l~~~~~ 255 (428)
+...++.+|+||+++-++++...... ++.......... ++..+-..+.+.+.+.+.
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~ 120 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSS 120 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHh
Confidence 46678999999999999999987665 222222221222 567777777777766544
No 132
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=60.91 E-value=4.5 Score=39.80 Aligned_cols=27 Identities=15% Similarity=0.165 Sum_probs=22.4
Q ss_pred CceEEEEeccCceEEEEEEeCCeeEEE
Q 014219 5 AGVAIGIDLGTTYSCVAVWQHDKVEII 31 (428)
Q Consensus 5 ~~~~vgID~Gt~~~~va~~~~~~~~~i 31 (428)
..-+|.|.-|+.+.+++.+.+-.|..+
T Consensus 39 ~~~~IVIHpGS~~lRIG~AsD~~P~~i 65 (655)
T 4am6_A 39 PTATIVIHPGSNSIKIGFPKDDHPVVV 65 (655)
T ss_dssp GGGEEEEECCSSEEEEECTTSSSCEEE
T ss_pred CCCeEEEcCCCcceeeeecCCCCCccc
Confidence 467999999999999998877666555
No 133
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=56.21 E-value=9.7 Score=33.19 Aligned_cols=21 Identities=14% Similarity=0.196 Sum_probs=18.8
Q ss_pred ceEEEEeccCceEEEEEEe-CC
Q 014219 6 GVAIGIDLGTTYSCVAVWQ-HD 26 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~-~~ 26 (428)
++.+.||+|+|+++.++++ ++
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~ 44 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAA 44 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTT
T ss_pred CcEEEEEeCCCeeEEEEEeCCC
Confidence 5789999999999999998 55
No 134
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=52.69 E-value=24 Score=32.56 Aligned_cols=48 Identities=13% Similarity=0.117 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCc-CcHHHHHHHHhhcC
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSS-RIPKLQQLLQDFFL 364 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s-~~~~l~~~l~~~~~ 364 (428)
.+++-.+.+|...|-......+ .+|.|+||||-+ +++.+++.+.+.+.
T Consensus 300 lA~d~f~yri~k~IGa~~a~Lg----gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 300 LVLEIYDYRIAKYIGAYAAAMN----GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 3556666777777766666654 378999999999 99999999999884
No 135
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=52.51 E-value=28 Score=31.79 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=17.8
Q ss_pred ceEEEEeccCceEEEEEEeC
Q 014219 6 GVAIGIDLGTTYSCVAVWQH 25 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~ 25 (428)
+++||||+|.|+++++..+.
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEec
Confidence 58999999999999998853
No 136
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=50.34 E-value=23 Score=32.59 Aligned_cols=49 Identities=8% Similarity=0.044 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCc-CcHHHHHHHHhhcC
Q 014219 312 EQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSS-RIPKLQQLLQDFFL 364 (428)
Q Consensus 312 ~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s-~~~~l~~~l~~~~~ 364 (428)
..+++-.+.+|...|-......+ ++|.|+|+||-+ +++.+++.+.+.+.
T Consensus 300 ~la~d~f~yriak~Iga~aa~LG----~vDaIVfTGGIgEns~~vr~~I~~~l~ 349 (398)
T 4ijn_A 300 KLAYDVYIHRLRKYIGAYMAVLG----RTDVISFTAGVGENVPPVRRDALAGLG 349 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS----SCCEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC----CCcEEEECCccccccHHHHHHHHHHHh
Confidence 34556666666666666655542 478999999988 67889999998874
No 137
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=49.39 E-value=9.2 Score=36.88 Aligned_cols=30 Identities=10% Similarity=0.023 Sum_probs=23.8
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHcCCceE
Q 014219 144 NAVITVPAYFSDSQRQATEDAATQCGLQVL 173 (428)
Q Consensus 144 ~~vitvP~~~~~~~~~~l~~a~~~ag~~~v 173 (428)
.++.-+|..++.+...++.+++...|++..
T Consensus 132 ~~I~v~~~~i~~~d~a~~in~a~~~g~~i~ 161 (607)
T 1nbw_A 132 GWIVLIDDAVDFLDAVWWLNEALDRGINVV 161 (607)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEECCCccCHHHHHHHHHHHHHcCCcEE
Confidence 344458999999999999998888888543
No 138
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=47.77 E-value=8.1 Score=34.01 Aligned_cols=44 Identities=14% Similarity=0.078 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhhcCC--CCcCCCCChhhHHHhHHHHHHH
Q 014219 339 AVDDVVIVGGSSRIPKLQQLLQDFFLG--KNLCRHINADEAVATGAAIQAA 387 (428)
Q Consensus 339 ~i~~Vvl~GG~s~~~~l~~~l~~~~~~--~~v~~~~~p~~ava~Ga~~~~~ 387 (428)
++..|+|.||.+.. +.+.+++.+.. .++. .+..+.+.||++++.
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~---~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIG---KILQSPMEGLIQYHS 277 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEE---EECSCTHHHHHTTSS
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEe---ecCCCHHHHHHHHHH
Confidence 56789999998876 66777777733 2232 234677889998764
No 139
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=46.56 E-value=88 Score=29.41 Aligned_cols=56 Identities=20% Similarity=0.347 Sum_probs=35.8
Q ss_pred CceEEEEEEecCcceEEEEEEEeC-C-e----EEEEEecCC-CCcchHHHHHHHHHHHHHHHH
Q 014219 200 GVKNVLIFDLGGGTFDVSLLAIEN-G-V----IRVRATDGN-TRLGGVDFNNRMVDYFVEEFK 255 (428)
Q Consensus 200 ~~~~~lvvDiG~~t~d~~~~~~~~-~-~----~~~~~~~~~-~~~Gg~~id~~l~~~l~~~~~ 255 (428)
+...++.+|+||+++-+++++..+ . . .+....... ..-.|..+-..+++.+.+.+.
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~ 128 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPAEKMSGSGTELFKYIAETLADFLE 128 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999976 3 1 222222222 122456666666666665544
No 140
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=45.77 E-value=10 Score=31.98 Aligned_cols=40 Identities=20% Similarity=0.388 Sum_probs=26.7
Q ss_pred HcCCceEeeechhHHHHHHhhccccccCCccccCceEEEEEEecCcceEEEEEE
Q 014219 167 QCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLA 220 (428)
Q Consensus 167 ~ag~~~v~~~~E~~Aaa~~~~~~~~~~~~~~~~~~~~~lvvDiG~~t~d~~~~~ 220 (428)
..|++ +.+..+..|+|++.... .+++++-+|.| .-.+++.
T Consensus 90 ~~~~p-v~v~NDanaaalge~~~------------~~~~~l~~GtG-iG~gii~ 129 (226)
T 3lm2_A 90 AFGRP-VRIVNDALMQAIGSYNG------------GRMLFLGLGTG-LGAAMIV 129 (226)
T ss_dssp HHTSC-EEEEEHHHHHHHHHCCS------------SEEEEEEESSS-EEEEEEE
T ss_pred hcCCe-EEEEEHHHHHHHHHhhc------------CcEEEEEeCCc-eEEEEEE
Confidence 34664 68899999999876432 35778888766 4444443
No 141
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=45.18 E-value=23 Score=32.87 Aligned_cols=53 Identities=15% Similarity=0.227 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC--CCCCCCCeEEEEcCCc-CcHHHHHHHHhhcC
Q 014219 312 EQLNMDLFEKCIEHVDTCLAKAK--IDRTAVDDVVIVGGSS-RIPKLQQLLQDFFL 364 (428)
Q Consensus 312 ~~~~~~~i~~i~~~i~~~l~~~~--~~~~~i~~Vvl~GG~s-~~~~l~~~l~~~~~ 364 (428)
..+++-.+.+|...|-......+ .....+|.|+||||-+ +++.+++.+.+.+.
T Consensus 323 ~lA~d~f~yri~k~IGa~aa~L~~~~~~G~vDaIVFTGGIGEns~~iR~~i~~~l~ 378 (438)
T 4h0p_A 323 KLTYAVFLDRLLNFVAQYLFKLLSEVPIESIDGLVFSGGIGEKGAELRRDVLKKLA 378 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCGGGSCEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCEEEECCccccCcHHHHHHHHHhHh
Confidence 34566666777776666555532 1112478999999976 99999999998873
No 142
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=44.43 E-value=23 Score=32.29 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCc-CcHHHHHHHHhhcC
Q 014219 314 LNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSS-RIPKLQQLLQDFFL 364 (428)
Q Consensus 314 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s-~~~~l~~~l~~~~~ 364 (428)
+++-.+.+|...|-...... ..+|.|+||||-+ +++.+++.+.+.+.
T Consensus 292 A~d~f~yri~k~IGa~aa~L----~gvDaIVFTgGIgEns~~iR~~i~~~l~ 339 (384)
T 3khy_A 292 AIEIFSHRVAKFVASYMIYF----NKLDALVFTGGIGENAANIRKNIISKLA 339 (384)
T ss_dssp HHHHHHHHHHHHHHHHGGGC----SSCCEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCCEEEECCccccCcHHHHHHHHhhcc
Confidence 44545555555555544443 2489999999988 88999999998873
No 143
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=42.58 E-value=96 Score=29.03 Aligned_cols=25 Identities=36% Similarity=0.643 Sum_probs=22.1
Q ss_pred CceEEEEEEecCcceEEEEEEEeCC
Q 014219 200 GVKNVLIFDLGGGTFDVSLLAIENG 224 (428)
Q Consensus 200 ~~~~~lvvDiG~~t~d~~~~~~~~~ 224 (428)
+...++.+|+||+++-++.+++.++
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~ 81 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG 81 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc
Confidence 4567999999999999999999765
No 144
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=42.08 E-value=37 Score=31.12 Aligned_cols=49 Identities=8% Similarity=-0.029 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcC-cHHHHHHHHhhcC
Q 014219 312 EQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSR-IPKLQQLLQDFFL 364 (428)
Q Consensus 312 ~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~-~~~l~~~l~~~~~ 364 (428)
..+++-.+.+|...|-......+ .+|.|+||||-+. ++.+++.+.+.+.
T Consensus 291 ~lA~d~f~yri~k~Iga~aa~Lg----~vDaIVfTGGIgens~~vR~~i~~~l~ 340 (391)
T 3r9p_A 291 QLAYSVFTHRLRKYIGAYLAVLG----HTDVISFTAGIGENDAAVRRDAVSGME 340 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS----SCCEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHHHHH
Confidence 34556666677766666655543 4789999999886 7999999998873
No 145
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=42.02 E-value=20 Score=31.53 Aligned_cols=45 Identities=27% Similarity=0.353 Sum_probs=34.1
Q ss_pred CeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHH
Q 014219 341 DDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAI 388 (428)
Q Consensus 341 ~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~ 388 (428)
..|.|+|........+..++.. +.++... +++.++..|....+..
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~~--G~~~~~~-d~~~~~~~GL~~~~~~ 292 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAAI--GREVSAV-AGDTAFQTGIRSIAYA 292 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHHT--TCCEEEE-EHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHHc--CCCceec-CHHHHHHHHHHHHHHH
Confidence 5799999999988888888764 6655444 7888888887765543
No 146
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=42.02 E-value=2.1 Score=37.98 Aligned_cols=44 Identities=11% Similarity=-0.022 Sum_probs=26.8
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHH-cCC-ceEeeechhHHHHHHhh
Q 014219 143 TNAVITVPAYFSDSQRQATEDAATQ-CGL-QVLKIIAEPTAAAIAYG 187 (428)
Q Consensus 143 ~~~vitvP~~~~~~~~~~l~~a~~~-ag~-~~v~~~~E~~Aaa~~~~ 187 (428)
..+.+++|-.- ......+++.++. .++ ..+.+..+..||+++..
T Consensus 59 ~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~ 104 (291)
T 1zxo_A 59 NAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC 104 (291)
T ss_dssp --CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT
T ss_pred cEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc
Confidence 46788888543 2222345554443 354 36889999999998764
No 147
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=41.88 E-value=84 Score=27.76 Aligned_cols=53 Identities=9% Similarity=0.102 Sum_probs=32.1
Q ss_pred ccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHH
Q 014219 198 ASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFV 251 (428)
Q Consensus 198 ~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~ 251 (428)
..+...++.+|+|+..+.++++......+......... .+...+-+.+.+.+.
T Consensus 20 ~~~~~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~~-~~~~~~~~~i~~~i~ 72 (327)
T 2ap1_A 20 FQSNAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPH-TSYSAFLDAVCELVE 72 (327)
T ss_dssp ---CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCC-SCHHHHHHHHHHHHH
T ss_pred EcCCceEEEEEECCCEEEEEEEeCCCCEEEEEEecCCC-CCHHHHHHHHHHHHH
Confidence 34456789999999999999988655544433333322 244555555555554
No 148
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=40.67 E-value=24 Score=24.48 Aligned_cols=27 Identities=19% Similarity=0.337 Sum_probs=24.7
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCce
Q 014219 146 VITVPAYFSDSQRQATEDAATQCGLQV 172 (428)
Q Consensus 146 vitvP~~~~~~~~~~l~~a~~~ag~~~ 172 (428)
.++.|+.++..+|..+.+.++..|+..
T Consensus 35 ~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred EEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 688899999999999999999999854
No 149
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=37.29 E-value=33 Score=31.48 Aligned_cols=21 Identities=14% Similarity=0.309 Sum_probs=18.6
Q ss_pred ceEEEEeccCceEEEEEEeCC
Q 014219 6 GVAIGIDLGTTYSCVAVWQHD 26 (428)
Q Consensus 6 ~~~vgID~Gt~~~~va~~~~~ 26 (428)
+.++|||+|.|+++++..+.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 379999999999999998765
No 150
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=35.30 E-value=89 Score=27.50 Aligned_cols=49 Identities=20% Similarity=0.338 Sum_probs=29.3
Q ss_pred eEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHH
Q 014219 202 KNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYF 250 (428)
Q Consensus 202 ~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l 250 (428)
..++.+|+|+..+.++++......+...........+.+.+-+.+.+.+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~~~~~~~~~~~~~~~~~~l~~~i 54 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSIIESI 54 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCTTTTTTHHHHHHHHH
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 4689999999999999998655544333333322223344444444333
No 151
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=35.09 E-value=1.2e+02 Score=26.40 Aligned_cols=53 Identities=13% Similarity=0.134 Sum_probs=32.1
Q ss_pred eEEEEEEecCcceEEEEEEEeCCeEEEEEecC-CCCcchHHHHHHHHHHHHHHH
Q 014219 202 KNVLIFDLGGGTFDVSLLAIENGVIRVRATDG-NTRLGGVDFNNRMVDYFVEEF 254 (428)
Q Consensus 202 ~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~-~~~~Gg~~id~~l~~~l~~~~ 254 (428)
..++.+|+|++.+.+.++......+....... ....+...+-+.+.+.+.+.+
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~~~l~~~i~~~l 64 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASDGTPLAMAEGGASALSQGIAKSWQAVLSTLEAAF 64 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETTCCEEEEEEESCCCGGGCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCccceEEEEEcCCCCEEEEEeCCCCCcccCHHHHHHHHHHHHHHHH
Confidence 36899999999999999885544433322211 122345555566665554443
No 152
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=35.04 E-value=53 Score=27.55 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhc
Q 014219 310 RFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFF 363 (428)
Q Consensus 310 ~~~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~ 363 (428)
+.+++.+...+.|.+.+.+.+++.+ .-.+.|+||++-.+.++..++..+
T Consensus 9 ~~~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~LsgGstp~~~y~~L~~~~i 57 (226)
T 3lwd_A 9 GRQRLAERLADTVAQALEADLAKRE-----RALLVVSGGSTPKPFFTSLAAKAL 57 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSS-----CEEEEECCSSTTHHHHHHHHTSCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHhcCC
Confidence 3344555555566666666665432 247899999999988888876443
No 153
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=34.31 E-value=1.1e+02 Score=27.06 Aligned_cols=53 Identities=8% Similarity=-0.002 Sum_probs=32.4
Q ss_pred ccCceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHHH
Q 014219 198 ASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFV 251 (428)
Q Consensus 198 ~~~~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l~ 251 (428)
.+++..++.+|+|+..+.++++......+........ ..+...+.+.+.+.+.
T Consensus 20 ~n~~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~-~~~~~~~~~~i~~~i~ 72 (327)
T 4db3_A 20 FQSNAMYYGFDVGGTKIEFGAFNEKLERVATERVPTP-TDDYPLLLETIAGLVA 72 (327)
T ss_dssp SCCSCCEEEEEECSSEEEEEEECTTCCEEEEEEEECC-TTCHHHHHHHHHHHHH
T ss_pred ECCCcEEEEEEECCCEEEEEEEeCCCcEEEEEEecCC-CCCHHHHHHHHHHHHH
Confidence 3445578999999999999998765554433333331 2244555555555443
No 154
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=34.23 E-value=1.2e+02 Score=28.55 Aligned_cols=25 Identities=40% Similarity=0.709 Sum_probs=21.5
Q ss_pred CceEEEEEEecCcceEEEEEEEeCC
Q 014219 200 GVKNVLIFDLGGGTFDVSLLAIENG 224 (428)
Q Consensus 200 ~~~~~lvvDiG~~t~d~~~~~~~~~ 224 (428)
+...++.+|+||+++-++.+++.+.
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC-
T ss_pred cceEEEEEEecCceEEEEEEEECCC
Confidence 4667999999999999999999764
No 155
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=33.07 E-value=50 Score=30.56 Aligned_cols=51 Identities=14% Similarity=0.102 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCc-CcHHHHHHHHhhcC
Q 014219 311 FEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSS-RIPKLQQLLQDFFL 364 (428)
Q Consensus 311 ~~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s-~~~~l~~~l~~~~~ 364 (428)
-..+++-.+.+|...|-......+ -++|.|+||||-+ +++.+|+.+.+.+.
T Consensus 314 A~lA~d~f~yri~k~IGa~aa~L~---G~vDaIVFTgGIGEns~~vR~~v~~~l~ 365 (415)
T 3sk3_A 314 AKRAMDVYCHRLAKYIGSYTALMD---GRLDAVVFTGGIGENAAMVRELSLGKLG 365 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGST---TCCCEEEEEHHHHTTCHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC---CCCCEEEECCccccCCHHHHHHHHhhch
Confidence 344555566666665555544432 2489999999977 79999999998873
No 156
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=32.67 E-value=32 Score=30.77 Aligned_cols=48 Identities=29% Similarity=0.320 Sum_probs=37.7
Q ss_pred CeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHHHhcC
Q 014219 341 DDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSG 391 (428)
Q Consensus 341 ~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~~~~~ 391 (428)
..|+|+|........+..++.. +.++... +++.++..|....+..+..
T Consensus 260 ~~V~LiG~~~L~~~Y~~AL~~~--G~~~~~~-d~d~a~~~GL~~~a~~~~~ 307 (330)
T 3t69_A 260 DGVCLVGSGGLGTLYRTALESQ--GLNVRAV-DADEAVRAGLSAAARAIWP 307 (330)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT--TCEEEEE-EHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEeCHHHHHHHHHHHHHc--CCCceee-CHHHHHHHHHHHHHHHHHH
Confidence 5799999999998999988764 6654444 7889999998877766655
No 157
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=32.38 E-value=74 Score=29.22 Aligned_cols=49 Identities=6% Similarity=0.034 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCC-cCcHHHHHHHHhhcC
Q 014219 312 EQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGS-SRIPKLQQLLQDFFL 364 (428)
Q Consensus 312 ~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~-s~~~~l~~~l~~~~~ 364 (428)
..+++-.+.+|...|-......+ .+|.|+||||- -+++.+++.+.+.+.
T Consensus 303 ~lA~d~f~yri~k~IGa~aa~L~----GvDaIVFTgGIGEns~~vR~~i~~~l~ 352 (404)
T 4h0o_A 303 QLAFDVYIKQLAKTIGGLMVEIG----GLDLLVFTDQMGLEVWQVRKAICDKMK 352 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----CCCEEEECCccccCcHHHHHHHHhhhh
Confidence 34566666777777766655543 27899999996 477999999998873
No 158
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=32.04 E-value=68 Score=25.59 Aligned_cols=39 Identities=21% Similarity=0.102 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcH--HHHHHHHhhcCCCCc
Q 014219 322 CIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIP--KLQQLLQDFFLGKNL 368 (428)
Q Consensus 322 i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~--~l~~~l~~~~~~~~v 368 (428)
|.+.+.+.+++ .|.|+.+||.|-.+ +.++.+++.| +.++
T Consensus 52 I~~~l~~a~~~-------~DlVittGG~g~~~~D~T~ea~a~~~-~~~l 92 (172)
T 3kbq_A 52 IGWAFRVALEV-------SDLVVSSGGLGPTFDDMTVEGFAKCI-GQDL 92 (172)
T ss_dssp HHHHHHHHHHH-------CSEEEEESCCSSSTTCCHHHHHHHHH-TCCC
T ss_pred HHHHHHHHHhc-------CCEEEEcCCCcCCcccchHHHHHHHc-CCCe
Confidence 33444455554 36899999987654 6888888888 5554
No 159
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=31.92 E-value=82 Score=26.51 Aligned_cols=46 Identities=20% Similarity=0.265 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhc
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFF 363 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~ 363 (428)
++.+...+.+.+.+.+.+++.+ .-.+.|+||++..+.++...+..+
T Consensus 16 ~l~~~~A~~i~~~i~~~i~~~~-----~~~l~lsgGstp~~~y~~L~~~~i 61 (233)
T 3nwp_A 16 ALEQQLASKIASQLQEAVDARG-----KASLVVSGGSTPLKLFQLLSMKSI 61 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS-----CEEEEECCSSTTHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHhcCC
Confidence 3444455566666677776643 237899999999998888877544
No 160
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=30.30 E-value=34 Score=31.15 Aligned_cols=72 Identities=11% Similarity=-0.047 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcC-CcCcHHHHH------HHHhhcCC-----------CCcCCCCCh
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGG-SSRIPKLQQ------LLQDFFLG-----------KNLCRHINA 374 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG-~s~~~~l~~------~l~~~~~~-----------~~v~~~~~p 374 (428)
++++...+.+...+...+... +++.|+|.|| .++.+.+.+ .+++.+.. .++......
T Consensus 283 ~~l~~~~~~L~~~i~~l~~~l-----~p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 357 (373)
T 2q2r_A 283 KAMKKYHEYLMRVGSEASMAL-----LPLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKL 357 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----CCSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----CCCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecC
Confidence 344444444555555555543 3457888788 666555544 55554321 122233344
Q ss_pred hhHHHhHHHHHHHHh
Q 014219 375 DEAVATGAAIQAAIL 389 (428)
Q Consensus 375 ~~ava~Ga~~~~~~~ 389 (428)
..+.+.||+.++..+
T Consensus 358 ~~a~l~GAa~l~~~~ 372 (373)
T 2q2r_A 358 LNLNLMGCYRCGLDL 372 (373)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHHHhc
Confidence 468999999887553
No 161
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=28.76 E-value=1.8e+02 Score=26.38 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=31.0
Q ss_pred ceEEEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHH
Q 014219 201 VKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYF 250 (428)
Q Consensus 201 ~~~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l 250 (428)
...++.+|+|+..+.++++......+...........+.+.+-+.+.+.+
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~~~~~~~~~~~~l~~~i 135 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDASMNILAHEAHPLPSQSDREETLNVMYRII 135 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCSSCCHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCEEEEEEECCCCCEEEEEEEccCCCCCHHHHHHHHHHHH
Confidence 45789999999999999998765554433333322224444444444444
No 162
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=28.71 E-value=74 Score=27.64 Aligned_cols=48 Identities=19% Similarity=0.211 Sum_probs=29.5
Q ss_pred EEEEEecCcceEEEEEEEeCCeEEEEEecC-CC-CcchHHHHHHHHHHHHH
Q 014219 204 VLIFDLGGGTFDVSLLAIENGVIRVRATDG-NT-RLGGVDFNNRMVDYFVE 252 (428)
Q Consensus 204 ~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~-~~-~~Gg~~id~~l~~~l~~ 252 (428)
++.||+||+++.+.++. ....+....... .. ..+.+.+-+.+.+.+.+
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 51 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGKSLGRFQTSGINPFQQDRNEIDTALRSEVLP 51 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEECCCTTTSCHHHHHHHHTTTTHH
T ss_pred EEEEEeCccceEEEEEe-CCeEEEEEECCCCCcccCCHHHHHHHHHHHHHH
Confidence 57899999999999998 433332222222 12 23666666666655543
No 163
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=28.29 E-value=96 Score=26.02 Aligned_cols=47 Identities=17% Similarity=0.193 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhc
Q 014219 312 EQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFF 363 (428)
Q Consensus 312 ~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~ 363 (428)
+++.+...+.|.+.+.+.+++.+. -.+.|+||++-.+.++..++..+
T Consensus 12 ~~l~~~~A~~i~~~i~~~i~~~~~-----~~l~lsgGstp~~~y~~L~~~~i 58 (232)
T 3lhi_A 12 AEAAQSLADAVADALQGALDEKGG-----AVLAVSGGRSPIAFFNALSQKDL 58 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSC-----EEEEECCSSTTHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC-----EEEEEeCCCCHHHHHHHHHhcCC
Confidence 344445556666667777765432 37899999999888888776443
No 164
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=26.81 E-value=1.7e+02 Score=25.17 Aligned_cols=17 Identities=18% Similarity=0.382 Sum_probs=15.9
Q ss_pred EEEEEecCcceEEEEEE
Q 014219 204 VLIFDLGGGTFDVSLLA 220 (428)
Q Consensus 204 ~lvvDiG~~t~d~~~~~ 220 (428)
.+++|+|.+++.++++.
T Consensus 4 lL~IDIGNT~iK~gl~d 20 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFD 20 (266)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEEECCCeEEEEEEE
Confidence 68999999999999997
No 165
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=26.37 E-value=1.7e+02 Score=28.86 Aligned_cols=96 Identities=14% Similarity=0.128 Sum_probs=60.6
Q ss_pred ceEEEEEEecCcceEEEEEEEeCCeEEEE--EecCCCCcchHHHHHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHHHHHH
Q 014219 201 VKNVLIFDLGGGTFDVSLLAIENGVIRVR--ATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACES 278 (428)
Q Consensus 201 ~~~~lvvDiG~~t~d~~~~~~~~~~~~~~--~~~~~~~~Gg~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~ 278 (428)
...-+.||+|.+|.-+.++.+..+..--. ....-..+|.+-|++.-...- +
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~---------------------------~ 257 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVDE---------------------------N 257 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHHH---------------------------C
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHhc---------------------------C
Confidence 44568999999998888888877644222 223334667666555431110 0
Q ss_pred HHHHhccCCceeEEEeecccCcceeEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCc
Q 014219 279 AKRTLSSTIQTSIEIDYLYEGINFSSTITRARFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRI 352 (428)
Q Consensus 279 ~K~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~ 352 (428)
.+-++++-+-+++.|.+++.+.+++.+.+..++..++++|-..-.
T Consensus 258 -----------------------------~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~ 302 (631)
T 3zyy_X 258 -----------------------------PDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMT 302 (631)
T ss_dssp -----------------------------TTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHH
T ss_pred -----------------------------cccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHH
Confidence 011122333355677788888888888888889899999976543
No 166
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=26.28 E-value=54 Score=31.64 Aligned_cols=28 Identities=14% Similarity=0.239 Sum_probs=23.1
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCC
Q 014219 143 TNAVITVPAYFSDSQRQATEDAATQCGL 170 (428)
Q Consensus 143 ~~~vitvP~~~~~~~~~~l~~a~~~ag~ 170 (428)
..+++.+|..++.+.-..+.+.+...|+
T Consensus 129 ~~~i~~~~~~~df~~~a~~in~~~~~g~ 156 (610)
T 2d0o_A 129 APYILVVSSAFDFADIASVINASLRAGY 156 (610)
T ss_dssp SEEEEEECTTSCHHHHHHHHHHHHHTTC
T ss_pred CcEEEEECCcCCHHHHHHHHHHHHHCCC
Confidence 4688899999999988888887777766
No 167
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=25.88 E-value=1.7e+02 Score=25.99 Aligned_cols=53 Identities=11% Similarity=0.086 Sum_probs=33.0
Q ss_pred EEEEEEecCcceEEEEEEEeCCeEEEEEecCCCC--cchHHHHHHHHHHHHHHHH
Q 014219 203 NVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTR--LGGVDFNNRMVDYFVEEFK 255 (428)
Q Consensus 203 ~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~--~Gg~~id~~l~~~l~~~~~ 255 (428)
.++.+|+|++.+.++++......+.......... .+.+.+-+.+.+.+.+-+.
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~ 61 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKR 61 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCccceEEEEEeCCCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHH
Confidence 6899999999999999986554443333322111 3455566666666654443
No 168
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=25.86 E-value=1.3e+02 Score=25.94 Aligned_cols=47 Identities=13% Similarity=0.242 Sum_probs=27.9
Q ss_pred EEEEEecCcceEEEEEEEeCCeEEEEEecCCCCcchHHHHHHHHHHH
Q 014219 204 VLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYF 250 (428)
Q Consensus 204 ~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~~~Gg~~id~~l~~~l 250 (428)
++.+|+|+..+.++++......+...........+.+.+-+.+.+.+
T Consensus 3 ~lgidiggt~~~~~l~d~~g~il~~~~~~~~~~~~~~~~~~~i~~~i 49 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALV 49 (289)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEEECCSSCCHHHHHHHHHHHH
T ss_pred EEEEEeCCCEEEEEEECCCCCEEEEEEecCCCCCCHHHHHHHHHHHH
Confidence 68899999999999987654444333333322223444444444444
No 169
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=25.39 E-value=95 Score=27.24 Aligned_cols=49 Identities=18% Similarity=0.122 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcC
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFL 364 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~ 364 (428)
++++...+.+.+.++++|++++.+..+++.|+.-|++.+ +-+.+.+.|+
T Consensus 211 ~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~---~~d~i~~~lg 259 (317)
T 1hnj_A 211 EVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLR---IISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHH---HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHcC
Confidence 455556678888999999999999899999999888665 4567888883
No 170
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=23.87 E-value=67 Score=27.36 Aligned_cols=44 Identities=14% Similarity=0.317 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHH
Q 014219 312 EQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQ 360 (428)
Q Consensus 312 ~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~ 360 (428)
+++.+...+.|.+.+.+.+++.+ .-.+.|+||.+..+.++..++
T Consensus 17 ~~l~~~~A~~i~~~i~~~~~~~~-----~~~l~LsgGstP~~~y~~L~~ 60 (248)
T 3oc6_A 17 AALVAAAGDRLVDAISSAIGERG-----QATIVLTGGGTGIGLLKRVRE 60 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-----CEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-----CEEEEECCCccHHHHHHHHHh
Confidence 44455555666677777776643 237899999999888888887
No 171
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=23.61 E-value=68 Score=27.38 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHH
Q 014219 312 EQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQ 360 (428)
Q Consensus 312 ~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~ 360 (428)
+++.+...+.|.+.+.+.+++.+. -.+.|+||.+-.+.++..++
T Consensus 17 ~~l~~~~A~~i~~~i~~a~~~~~~-----~~l~LsgGstP~~~y~~L~~ 60 (251)
T 3tx2_A 17 DALVTAAGDRLASAITGALAERGK-----AMIVLTGGGTGIALLKHLRD 60 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSC-----EEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC-----EEEEECCCchHHHHHHHHHh
Confidence 444555556666777777766432 37899999998888888887
No 172
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=23.61 E-value=67 Score=27.74 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHH
Q 014219 312 EQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQ 360 (428)
Q Consensus 312 ~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~ 360 (428)
+++.+...+.|.+.+.+.+++.+ .-.+.|+||.+-.+.++..++
T Consensus 33 ~~l~~~~A~~i~~~i~~ai~~~~-----~~~l~LsgGstP~~~y~~L~~ 76 (268)
T 3ico_A 33 DILVAAAGKRLVGAIGAAVAARG-----QALIVLTGGGNGIALLRYLSA 76 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-----CEEEEECCSHHHHHHHHHHHH
T ss_pred chhhhhhcchhhhHhHHHHHhcC-----ceEEEEecCCchhHHHHHHHH
Confidence 44455555666677777776643 237899999998888888887
No 173
>4e1p_A Protein LSR2; anti-parallel beta sheet, dimer, DNA binding protein; 1.73A {Mycobacterium tuberculosis}
Probab=23.13 E-value=1.5e+02 Score=18.90 Aligned_cols=33 Identities=3% Similarity=0.187 Sum_probs=22.6
Q ss_pred ceeEEEeecccCcceeEEeeHHH---HHHHHHHHHH
Q 014219 288 QTSIEIDYLYEGINFSSTITRAR---FEQLNMDLFE 320 (428)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~i~ 320 (428)
.....+.+-.+|..+++.++.+. |.+.+.|.++
T Consensus 18 ~a~eTV~F~ldG~~YeIDLs~~nA~~lr~~L~~yi~ 53 (61)
T 4e1p_A 18 AADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVA 53 (61)
T ss_dssp BCCEEEEEEETTEEEEEEECHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEECCEEEEEECCHHHHHHHHHHHHHHHH
Confidence 34456777788999999998554 5555665553
No 174
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=22.28 E-value=1.4e+02 Score=26.61 Aligned_cols=46 Identities=22% Similarity=0.166 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHH
Q 014219 314 LNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLL 359 (428)
Q Consensus 314 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l 359 (428)
..+.+.+.+...|+++|++++.+..+++.|.++-|-+...+++--+
T Consensus 48 a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg~ 93 (334)
T 3eno_A 48 AAVHHSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTA 93 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHHH
Confidence 3455667788899999999999989999999999888777776443
No 175
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=22.18 E-value=1.6e+02 Score=26.12 Aligned_cols=68 Identities=15% Similarity=0.095 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHH------HHhhcCCCCcCCCCChhhHHHhHHH
Q 014219 314 LNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQL------LQDFFLGKNLCRHINADEAVATGAA 383 (428)
Q Consensus 314 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~------l~~~~~~~~v~~~~~p~~ava~Ga~ 383 (428)
.-+...+.+...++++|++++.+..+++.|..+-|-+...+++-- +...+ ++++. ..+..++-|.++.
T Consensus 43 ~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lrvg~~~ak~la~~~-~~pl~-~v~h~~aHa~~a~ 116 (330)
T 2ivn_A 43 AAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKY-RKPIV-GVNHCIAHVEITK 116 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHHHHHHHHHHHHHHT-TCCEE-EEEHHHHHHHGGG
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHHHHHHHHHHHHHHc-CCCEE-eeCcHHHHHHHHh
Confidence 345566777888999999999988999999998777666665532 23333 44433 2344555555543
No 176
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=21.94 E-value=4.2e+02 Score=23.55 Aligned_cols=30 Identities=17% Similarity=0.287 Sum_probs=23.8
Q ss_pred CceEEEEEEecCcceEEEEEEEe-CCeEEEE
Q 014219 200 GVKNVLIFDLGGGTFDVSLLAIE-NGVIRVR 229 (428)
Q Consensus 200 ~~~~~lvvDiG~~t~d~~~~~~~-~~~~~~~ 229 (428)
....+.+||+|..++-+.+++.. ++.++.+
T Consensus 14 ~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i 44 (343)
T 3cer_A 14 ESVTVAGIDCGTNSIRLKIARVDADGMHEVV 44 (343)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEcccceeEeEEEEEcCCCCEEEE
Confidence 35678999999999999999997 3445444
No 177
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=21.78 E-value=1.3e+02 Score=26.59 Aligned_cols=47 Identities=11% Similarity=0.140 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhc
Q 014219 314 LNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFF 363 (428)
Q Consensus 314 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~ 363 (428)
+++-..+.+.+.++++|++++.+..+++.+++-+++.+ +-+.+.+.|
T Consensus 218 v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~---~~d~~~~~l 264 (331)
T 2x3e_A 218 VFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTR---ILAAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHc
Confidence 44455677888899999999999899999999887765 445677777
No 178
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=21.65 E-value=1.1e+02 Score=25.26 Aligned_cols=64 Identities=14% Similarity=0.073 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHH------HhhcCCCCcCCCCChhhHHHhHHH
Q 014219 318 LFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLL------QDFFLGKNLCRHINADEAVATGAA 383 (428)
Q Consensus 318 ~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l------~~~~~~~~v~~~~~p~~ava~Ga~ 383 (428)
+.+.+...+++.|++++....+++.|.++-|-+...+||--+ ...+ +++++.. +..++.|..+.
T Consensus 35 Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~-~iPl~gV-stL~a~a~~~~ 104 (213)
T 3r6m_A 35 HTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGA-ELPMIGV-STLAAMAQASY 104 (213)
T ss_dssp CHHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHT-TCCEEEE-EHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHh-CCCEEEE-cCHHHHHHhhh
Confidence 455677788899999998889999999999988888888543 3333 5555433 55556665543
No 179
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=21.40 E-value=2.9e+02 Score=24.36 Aligned_cols=29 Identities=24% Similarity=0.604 Sum_probs=22.5
Q ss_pred CceEEEEEEecCcceEEEEEEEeCCeEEE
Q 014219 200 GVKNVLIFDLGGGTFDVSLLAIENGVIRV 228 (428)
Q Consensus 200 ~~~~~lvvDiG~~t~d~~~~~~~~~~~~~ 228 (428)
....++.+|+|+..+.++++......+..
T Consensus 28 ~~~~~lgiDiGgt~i~~~l~d~~G~il~~ 56 (343)
T 2yhw_A 28 GTLSALAVDLGGTNLRVAIVSMKGEIVKK 56 (343)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSCEEEE
T ss_pred CCcEEEEEEECCCEEEEEEECCCCcEEEE
Confidence 35678999999999999998865554433
No 180
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=21.32 E-value=1.3e+02 Score=26.77 Aligned_cols=47 Identities=13% Similarity=0.047 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhc
Q 014219 314 LNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFF 363 (428)
Q Consensus 314 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~ 363 (428)
+++-..+.+.+.++++|++++....+++.|+.-+++.+ +-+.+.+.|
T Consensus 225 v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~---~~d~i~~~l 271 (339)
T 1mzj_A 225 VFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLR---IIDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH---HHHHHHHHh
Confidence 44445677788899999999998899999998887664 455677777
No 181
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=20.62 E-value=1.4e+02 Score=26.28 Aligned_cols=49 Identities=8% Similarity=-0.056 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcC
Q 014219 313 QLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFL 364 (428)
Q Consensus 313 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~ 364 (428)
++++-..+.+.+.++++|++++.++.+++.|+.-+.+.+ +.+.+.+.|+
T Consensus 213 ~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~---~~d~~~~~lg 261 (322)
T 1ub7_A 213 EVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLR---IIDAARERLG 261 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH---HHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHcC
Confidence 344555677888899999999999899999999887654 3556888883
No 182
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=20.55 E-value=1.8e+02 Score=25.16 Aligned_cols=50 Identities=12% Similarity=0.082 Sum_probs=29.5
Q ss_pred EEEEEEecCcceEEEEEEEeCCeEEEEEecCCC--CcchHHHHHHHHHHHHH
Q 014219 203 NVLIFDLGGGTFDVSLLAIENGVIRVRATDGNT--RLGGVDFNNRMVDYFVE 252 (428)
Q Consensus 203 ~~lvvDiG~~t~d~~~~~~~~~~~~~~~~~~~~--~~Gg~~id~~l~~~l~~ 252 (428)
.++.+|+|+..+.++++......+......... ..+.+.+-+.+.+.+.+
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 54 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKI 54 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHH
Confidence 368999999999999987654444333333211 12444555555555543
No 183
>2nrh_A Transcriptional activator, putative, BAF family; structural genomics, unknown function, putative transcription activator, PSI-2; 2.30A {Campylobacter jejuni} SCOP: c.55.1.13 c.55.1.13
Probab=20.15 E-value=42 Score=28.02 Aligned_cols=63 Identities=11% Similarity=0.151 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCcCcHHHHHHHHhhcCCCCcCCCCChhhHHHhHHHHHHH
Q 014219 308 RARFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAA 387 (428)
Q Consensus 308 ~~~~~~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~Vvl~GG~s~~~~l~~~l~~~~~~~~v~~~~~p~~ava~Ga~~~~~ 387 (428)
++..+.+-.-++..+...+++. .. .-.|++|||.+. .+ ...++. . ..+|. -+-.|+.+...
T Consensus 144 ~nT~~ai~sGi~~g~~g~I~~~----~~----~~~vi~TGG~a~--~l----~~~~~~-~---~~d~~-LvL~GL~~i~~ 204 (219)
T 2nrh_A 144 QKTMDALSYGVFKGIYLLIKDA----AQ----NKKLYFTGGDGQ--FL----ANYFDH-A---IYDKL-LIFRGMKKIIK 204 (219)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH----TT----TSCEEEESTTHH--HH----HTTCSS-E---EECTT-HHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHh----CC----CCeEEEECCCHH--HH----HhhCCC-C---EECcC-hHHHHHHHHHH
Confidence 3444555555666666666532 21 137999999885 33 333421 1 22554 36678877765
Q ss_pred Hh
Q 014219 388 IL 389 (428)
Q Consensus 388 ~~ 389 (428)
..
T Consensus 205 ~n 206 (219)
T 2nrh_A 205 EN 206 (219)
T ss_dssp HC
T ss_pred hc
Confidence 53
Done!