Citrus Sinensis ID: 014219

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43

MAGKAGVAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTDTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSDVSVQSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEGINFSSTITRARFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSGVCSDKAEDLVILDLKPCSHEPKIATGSNPSLLICNHL

cccccccEEEEEccccccEEEEEEccEEEECcccccccccccCEEEccccccccHHHHccccccccccccccccccccccccHHHHcccccccCEEEEccccccEEEEEEccEEEEEccHHHHHHHHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHHHHccEEEEEccHHHHHHHHHcccccccccccccccEEEEEEEcccccEEEEEEEEEccEEEEEEcccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccEEEECcccccccEECcccccccccccccc

****AGVAIGIDLGTTYSCVAVWQHDKVEIIPNDQGNRTTPSYVAFTDTESFVGDSAKNQVSTNPTNTVFDAKRLIGRRFSDVSVQSDIKHWPFKVIAGPDDKPMVEVKYKGKQKQVAAEEISSMVLKKKREIAEAFVGTAVTNAVITVPAYFSDSQRQATEDAATQCGLQVLKIIAEPTAAAIAYGLDRQQQGGIAASGVKNVLIFDLGGGTFDVSLLAIENGVIRVRATDGNTRLGGVDFNNRMVDYFVEEFKRKNKIDISGNARALHRLRIACESAKRTLSSTIQTSIEIDYLYEGINFSSTITRARFEQLNMDLFEKCIEHVDTCLAKAKIDRTAVDDVVIVGGSSRIPKLQQLLQDFFLGKNLCRHINADEAVATGAAIQAAILSGVCSDKAEDLVILDLKPCSHEPKIATGSNPSLLICNH*

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Probable mediator of RNA polymerase II transcription subunit 37c	In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.	probable	Q9LHA8
Heat shock cognate 70 kDa protein 2		probable	P27322
Heat shock cognate 71 kDa protein	Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Chaperone.	probable	P19120

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YUW, chain A
Confidence level:very confident
Coverage over the Query: 1-428
View the alignment between query and template
View the model in PyMOL