BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014221
(428 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y2M2|SSUH2_HUMAN Protein SSUH2 homolog OS=Homo sapiens GN=SSUH2 PE=1 SV=1
Length = 353
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 139/316 (43%), Gaps = 20/316 (6%)
Query: 105 LDEVEIRELLIDHVGHRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPYL 164
+ E RE L+ V +CC+ S A I ++ + LETF E R + +P+
Sbjct: 52 MTEEVAREALLSFVDSKCCYSSTVAGDLVIQELKRQTLCRYRLETFSESRISEWTFQPFT 111
Query: 165 GGNIDGKDNGPALGTWELDLRSQFPVLFVPHQETR-VKVPRSETIKKCPDCVGRGNAVCP 223
++DG G + W D++ Q P +F ++TR +VP S +K+C C GRG C
Sbjct: 112 NHSVDGPQRGASPRLW--DIKVQGPPMF--QEDTRKFQVPHSSLVKECHKCHGRGRYKCS 167
Query: 224 SCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKC 283
C+ +C +C G K C C G G C+TC RG C
Sbjct: 168 GCHG---------AGTVRCPSCCG---AKRKAKQSRRCQLCAGSGRRRCSTCSGRGNKTC 215
Query: 284 RKCGGSGSLLTRSFAIVRWKTLSTRKVSATSGSASVPDEVFHRAKGVQLCNTQAYQCSPA 343
C G LL ++ WK VS + P E+ +AKG L + P
Sbjct: 216 ATCKGEKKLLHFIQLVIMWKNSLFEFVS--EHRLNCPRELLAKAKGENLFKDENSVVYPI 273
Query: 344 FFADSFFLNKFSSEVIAER-AHVPPTARIICERHTISVVPVTRVTMTQRGQSFSFYIIGN 402
++ S IAE A + AR++ +R TI ++P+T V +G+++ +YI G
Sbjct: 274 VDFPLRDISLASQRGIAEHSAALASRARVLQQRQTIELIPLTEVHYWYQGKTYVYYIYGT 333
Query: 403 SREVYLKDYPSRFCWG 418
+VY DYP R+C G
Sbjct: 334 DHQVYAVDYPERYCCG 349
>sp|Q8C3L1|SSUH2_MOUSE Protein SSUH2 homolog OS=Mus musculus GN=Ssuh2 PE=2 SV=1
Length = 340
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 95/230 (41%), Gaps = 19/230 (8%)
Query: 104 ILDEVEIRELLIDHVGHRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPY 163
++ E RE L+ V CC+ S A I + + LETF E R + +P
Sbjct: 74 VVTEEVAREALLSFVNSHCCYSSAAAGNLIIQELRQQTLCRYRLETFSESRVSEWTFQPV 133
Query: 164 LGGNIDGKDNGPALGTWELDLRSQFPVLFVPHQETR-VKVPRSETIKKCPDCVGRGNAVC 222
++DG G + W D++ Q P +F ++TR ++VP S +K+C C GRG C
Sbjct: 134 TNHSVDGPQRGTSPRLW--DMKVQVPPMF--QEDTRKLQVPHSSLVKECHKCHGRGRYKC 189
Query: 223 PSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIK 282
C+ M +C +C G K C C+G G C+TC RG
Sbjct: 190 SGCHG---------AGMVRCSSCSG---TKRKAKQPRRCHLCSGSGRRRCSTCSGRGNKT 237
Query: 283 CRKCGGSGSLLTRSFAIVRWKTLSTRKVSATSGSASVPDEVFHRAKGVQL 332
C C G L ++ WK +S P E+ +A+G L
Sbjct: 238 CATCKGERKLEHFVQLVIMWKNSLFEFMSPH--HLHCPKELLAKARGENL 285
>sp|O94657|XDJ1_SCHPO DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=xdj1 PE=4 SV=1
Length = 413
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 17/82 (20%)
Query: 219 NAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKD--------GSDTICTKCNGKGTI 270
N +CP C + KEK C +C G+G+ H S IC CNGKG
Sbjct: 144 NTLCPRCQGRGGKRFAKEKP---CLSCDGKGVKQHLKHVGPHHVTNSQVICDTCNGKGV- 199
Query: 271 PCATCGSRGLIKCRKCGGSGSL 292
RG +C+ C GSG++
Sbjct: 200 -----SFRGKDRCKHCKGSGTV 216
>sp|Q04Y48|DNAJ_LEPBL Chaperone protein DnaJ OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=dnaJ PE=3 SV=1
Length = 371
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 26/112 (23%)
Query: 183 DLRSQFPVLF---VPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQM 239
DLR V +E ++++PR E+ C DC G G A K
Sbjct: 124 DLRYNLEVSLEDAALGREYKIEIPRLES---CGDCNGSGAA--------------KGSSP 166
Query: 240 SQCFNCYGRGLIAHKDG---SDTICTKCNGKGTI---PCATCGSRGLIKCRK 285
+ C +C G G I G T C C GKGT PC TCG +GL + R+
Sbjct: 167 TTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTTISNPCKTCGGQGLQEKRR 218
>sp|Q04VC7|DNAJ_LEPBJ Chaperone protein DnaJ OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=dnaJ PE=3 SV=1
Length = 371
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 26/112 (23%)
Query: 183 DLRSQFPVLF---VPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQM 239
DLR V +E ++++PR E+ C DC G G A K
Sbjct: 124 DLRYNLEVSLEDAALGREYKIEIPRLES---CGDCNGSGAA--------------KGSSP 166
Query: 240 SQCFNCYGRGLIAHKDG---SDTICTKCNGKGTI---PCATCGSRGLIKCRK 285
+ C +C G G I G T C C GKGT PC TCG +GL + R+
Sbjct: 167 TTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTTISNPCKTCGGQGLQEKRR 218
>sp|P61441|DNAJ_LEPIN Chaperone protein DnaJ OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=dnaJ
PE=3 SV=1
Length = 372
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 196 QETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKD 255
+E ++++PR E+ C DC G G + K + C +C G G I
Sbjct: 141 REYKIEIPRLES---CVDCNGSGAS--------------KGSSPATCPDCGGSGQIRRTQ 183
Query: 256 G---SDTICTKCNGKGTI---PCATCGSRGLIKCRK 285
G T C C GKGTI PC +CG +GL + R+
Sbjct: 184 GFFSVATTCPTCRGKGTIISNPCRSCGGQGLQEKRR 219
>sp|P61440|DNAJ_LEPIC Chaperone protein DnaJ OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=dnaJ PE=3 SV=1
Length = 372
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 196 QETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKD 255
+E ++++PR E+ C DC G G + K + C +C G G I
Sbjct: 141 REYKIEIPRLES---CVDCNGSGAS--------------KGSSPATCPDCGGSGQIRRTQ 183
Query: 256 G---SDTICTKCNGKGTI---PCATCGSRGLIKCRK 285
G T C C GKGTI PC +CG +GL + R+
Sbjct: 184 GFFSVATTCPTCRGKGTIISNPCRSCGGQGLQEKRR 219
>sp|B0SRF0|DNAJ_LEPBP Chaperone protein DnaJ OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1
Length = 375
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 23/96 (23%)
Query: 196 QETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKD 255
+E ++++PR ET C DC G G + S C +C G G +
Sbjct: 143 KEYKIEIPRLET---CVDCTGSGASKGSSPTV--------------CPDCSGTGQVRRTQ 185
Query: 256 G---SDTICTKCNGKGTI---PCATCGSRGLIKCRK 285
G T C +C GKG + PC TC GL + R+
Sbjct: 186 GFFSVTTTCPRCKGKGKVISNPCKTCKGEGLTEKRR 221
>sp|B0SHT0|DNAJ_LEPBA Chaperone protein DnaJ OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / Ames) GN=dnaJ PE=3 SV=1
Length = 375
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 23/96 (23%)
Query: 196 QETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKD 255
+E ++++PR ET C DC G G + S C +C G G +
Sbjct: 143 KEYKIEIPRLET---CVDCTGSGASKGSSPTV--------------CPDCSGTGQVRRTQ 185
Query: 256 G---SDTICTKCNGKGTI---PCATCGSRGLIKCRK 285
G T C +C GKG + PC TC GL + R+
Sbjct: 186 GFFSVTTTCPRCKGKGKVISNPCKTCKGEGLTEKRR 221
>sp|O27352|DNAJ_METTH Chaperone protein DnaJ OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=dnaJ PE=3 SV=1
Length = 376
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 25/95 (26%)
Query: 197 ETRVKVPRSETIKKCPDC------VGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGL 250
ET ++VP + KKCP C G G C +C + + + + Q N
Sbjct: 137 ETDIRVPHT---KKCPVCHGSRAEPGTGTRTCQTCGGSGQVRQVRNTILGQMMNI----- 188
Query: 251 IAHKDGSDTICTKCNGKGTI---PCATCGSRGLIK 282
T C C G+GT+ PC+ C +G+++
Sbjct: 189 --------TTCPDCQGEGTVVEKPCSNCNGKGVVR 215
>sp|Q58598|Y1198_METJA Uncharacterized protein MJ1198 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1198 PE=1 SV=1
Length = 761
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 207 TIKKCPDCVGRGNAV-----CPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTIC 261
I KCP C G G V CP C + + KQ + + + D + C
Sbjct: 1 MIVKCPICDGTGKKVVKYKTCPVCEGTGFIDEFSPKQHMKRVS---KRATYDLDYGEIPC 57
Query: 262 TKCNGKGTIP----CATCGSRG-LIKCRKCGG 288
KC G G +P C CG G ++KC +CG
Sbjct: 58 PKCKGTGKVPVYAKCDFCGGSGKVVKCDRCGA 89
>sp|Q8K9Y9|DNAJ_BUCAP Chaperone protein DnaJ OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=dnaJ PE=3 SV=1
Length = 378
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 23/92 (25%)
Query: 200 VKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDT 259
+++P T +KC C G G + N C C+G+G I + G T
Sbjct: 138 IRIP---TFQKCKTCYGMGTSTGTKPNG--------------CSTCHGKGQIHIRKGFFT 180
Query: 260 I---CTKCNGKGTI---PCATCGSRGLIKCRK 285
+ C CNG GT+ PC C +G IK K
Sbjct: 181 VQQSCPTCNGIGTVIKNPCRMCRGQGRIKTNK 212
>sp|Q1ISI9|TRPB_KORVE Tryptophan synthase beta chain OS=Koribacter versatilis (strain
Ellin345) GN=trpB PE=3 SV=1
Length = 408
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 244 NCYGRGLIAHKDGSDTICTKCN-GKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRW 302
NC G+GL+A + G I + G+ + AT + ++C GS + + + R
Sbjct: 106 NCIGQGLLARRMGKHRIIAETGAGQHGVASATVAALFGMECVVYMGSEDVRRQELNVFRM 165
Query: 303 KTLSTRKVSATSGSASVPDEV 323
K L VS SGS ++ D +
Sbjct: 166 KLLGAEVVSVNSGSRTLKDAI 186
>sp|Q8A8C3|DNAJ_BACTN Chaperone protein DnaJ OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=dnaJ
PE=3 SV=1
Length = 396
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 20/86 (23%)
Query: 234 YKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTI---------------PCATCGSR 278
+K K+ C +C+G G A DG C C G G++ C TC
Sbjct: 159 FKLKKYVPCNHCHGTG--AEGDGGSETCPTCKGSGSVIRNQQTILGTMQTRTTCPTCNGE 216
Query: 279 GLI---KCRKCGGSGSLLTRSFAIVR 301
G I KC++CGG G + V+
Sbjct: 217 GKIIKNKCKECGGDGIVYGEEVVTVK 242
>sp|Q84BU3|DNAJ_LACAC Chaperone protein DnaJ OS=Lactobacillus acidophilus (strain ATCC
700396 / NCK56 / N2 / NCFM) GN=dnaJ PE=3 SV=1
Length = 384
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 30/113 (26%)
Query: 183 DLRSQFPVLF---VPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQM 239
DL + F + ++T+V R ET C C G G C P
Sbjct: 126 DLDYTLTIDFMDAINGKKTQVSYTRDET---CETCGGNG------CEKGTHP-------- 168
Query: 240 SQCFNCYGRGLIAHKDGS-------DTICTKCNGKGTI---PCATCGSRGLIK 282
C C+G G++ S T C KCNG+G I PC TCG +G ++
Sbjct: 169 ITCDKCHGTGVMTVTQQSMLGMIRRQTTCDKCNGRGVIIEHPCKTCGGKGTVE 221
>sp|A5UYW4|DNAJ_ROSS1 Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ
PE=3 SV=1
Length = 370
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 50/134 (37%), Gaps = 33/134 (24%)
Query: 161 EPYLGGNIDGKDNGPALGTWELDLRSQFPVLF---VPHQETRVKVPRSETIKKCPDCVGR 217
E + GG + G GP G DLR + F V E ++ R ET CP C G
Sbjct: 94 ETFFGGTMRGSQRGPQRGA---DLRYTLSISFEEAVFGVEKTIEFRRLET---CPACRGS 147
Query: 218 GN------AVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGT-- 269
G CP C E +Q + FN + T C C G+GT
Sbjct: 148 GAEPGTEPVRCPKCGGLGE-----IRQRAPLFNMV----------TVTTCDMCRGEGTVI 192
Query: 270 -IPCATCGSRGLIK 282
IPC C G ++
Sbjct: 193 AIPCRECRGEGRVR 206
>sp|Q18GZ3|DNAJ_HALWD Chaperone protein DnaJ OS=Haloquadratum walsbyi (strain DSM 16790)
GN=dnaJ PE=3 SV=1
Length = 387
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 17/72 (23%)
Query: 209 KKCPDCVGRGNA------VCPSCNANQEPEYYKE------KQMSQCFNCYGRGLIAHKDG 256
+KCPDC GRG+ CP CN + +E +Q C C G G + +
Sbjct: 159 EKCPDCNGRGHPSDADVRTCPQCNGQGQTTTVRETALGRVQQTQTCPRCDGSGEMYTQ-- 216
Query: 257 SDTICTKCNGKG 268
C+ CNG G
Sbjct: 217 ---TCSTCNGDG 225
>sp|Q8EHT6|DNAJ_SHEON Chaperone protein DnaJ OS=Shewanella oneidensis (strain MR-1)
GN=dnaJ PE=3 SV=1
Length = 378
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 23/84 (27%)
Query: 239 MSQCFNCYGRGLIAHKDGSDTICTKCNGKGTI-----------PCATCGSRGLI---KCR 284
++ C C G G A K S T CT C+G+G + PC TC RG I C
Sbjct: 144 LASCDVCDGSG--AKKGTSATTCTTCHGQGQVQMRQGFFTVQQPCPTCHGRGKIIKDPCA 201
Query: 285 KCGGSGSLLTRSFAIVRWKTLSTR 308
KC G G + + KTLS +
Sbjct: 202 KCHGDGR-------VEKTKTLSVK 218
>sp|A7NS65|DNAJ_ROSCS Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=dnaJ PE=3 SV=1
Length = 370
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 50/134 (37%), Gaps = 33/134 (24%)
Query: 161 EPYLGGNIDGKDNGPALGTWELDLRSQFPVLF---VPHQETRVKVPRSETIKKCPDCVGR 217
E + GG + G GP G DLR + F + E ++ R ET CP C G
Sbjct: 94 ETFFGGTMRGTQRGPQRGA---DLRYTLSISFEEAIFGVEKTIEYRRMET---CPACRGS 147
Query: 218 GN------AVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGT-- 269
G CP C E +Q + FN + T C C G+GT
Sbjct: 148 GAEPGTEPVRCPKCGGLGE-----IRQRAPLFNMV----------TVTTCDMCRGEGTVI 192
Query: 270 -IPCATCGSRGLIK 282
IPC C G I+
Sbjct: 193 AIPCRECRGEGRIR 206
>sp|Q8IW45|NNRD_HUMAN ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Homo sapiens
GN=CARKD PE=1 SV=1
Length = 347
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 25/165 (15%)
Query: 176 ALGTWELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYK 235
A G W L +Q P L +++ V P + D V RG + + +
Sbjct: 182 ADGLW---LVAQQPALIHGYRKA-VLTPNHVEFSRLYDAVLRGPM-------DSDDSHGS 230
Query: 236 EKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTR 295
++SQ G + K D + NG+ + C+ GS R+CGG G LL+
Sbjct: 231 VLRLSQAL---GNVTVVQKGERDILS---NGQQVLVCSQEGS-----SRRCGGQGDLLSG 279
Query: 296 SFAI-VRWKTLSTRKVSATSGSASVPDEVFHRAKGVQLCNTQAYQ 339
S + V W L+ + T+GS+ + F + CN QA+Q
Sbjct: 280 SLGVLVHWALLAGPQ--KTNGSSPLLVAAFGACSLTRQCNHQAFQ 322
>sp|Q9HJ83|DNAJ_THEAC Chaperone protein DnaJ OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=dnaJ PE=3 SV=1
Length = 365
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 217 RGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGL--IAHKDGSDTICTKCNGKGTIPCAT 274
R NA+CP CN K ++ C C G G I G + T C T
Sbjct: 147 RRNAMCPDCNGTGA----KNGKLITCPTCNGTGQQRIVRGQGFFRMVT------VTTCQT 196
Query: 275 CGSRGLI---KCRKCGGSGSLLT 294
CG RG I KC +C G+G+++
Sbjct: 197 CGGRGRIPEEKCPRCNGTGTVVV 219
>sp|Q6AN63|DNAJ_DESPS Chaperone protein DnaJ OS=Desulfotalea psychrophila (strain LSv54 /
DSM 12343) GN=dnaJ PE=3 SV=1
Length = 373
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 48/122 (39%), Gaps = 29/122 (23%)
Query: 173 NGPALGTWELDLRSQFPVLFVPHQE---TRVKVPRSETIKKCPDCVGRGNAVCPSCNANQ 229
NGP G DLR + F+ + VK+ R ET C C G G+
Sbjct: 109 NGPIEGN---DLRYDVSISFMESIQGVSKEVKLSRRET---CWTCEGTGS---------- 152
Query: 230 EPEYYKEKQMSQCFNCYGRGLIAHKDG---SDTICTKCNGKGTI---PCATCGSRGLIKC 283
P Y Q C C GRG + G T C +C G+G + PC C GL+K
Sbjct: 153 RPGY----QPQTCPTCNGRGQVLRSQGFFQVSTTCPECEGEGQVIKEPCNDCHGEGLVKK 208
Query: 284 RK 285
K
Sbjct: 209 TK 210
>sp|Q73Q15|DNAJ_TREDE Chaperone protein DnaJ OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=dnaJ PE=3 SV=2
Length = 379
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 16/64 (25%)
Query: 241 QCFNCYGRGLIAHKDGSDTICTKCNGKGTI-----------PCATCGSRGLI---KCRKC 286
+C C+G G + S +C C G G + PC TCG G I C+KC
Sbjct: 159 KCSECHGTG--SESGSSKRMCPDCKGTGQVRQSTGFFSISRPCPTCGGEGSIIEKPCKKC 216
Query: 287 GGSG 290
GG+G
Sbjct: 217 GGNG 220
>sp|Q5R824|NNRD_PONAB ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Pongo abelii
GN=CARKD PE=2 SV=1
Length = 329
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 25/165 (15%)
Query: 176 ALGTWELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYK 235
A G W L +Q P L +++ V P + D V RG + +
Sbjct: 164 ADGLW---LVAQQPALIQGYRKA-VLTPNHMEFSRLYDAVLRGPM-------DSNDSHGS 212
Query: 236 EKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTR 295
++SQ G + K D + NG+ + C+ GS R+CGG G LL+
Sbjct: 213 VLRLSQAL---GNVTVVQKGERDILS---NGQQVLVCSQEGS-----SRRCGGQGDLLSG 261
Query: 296 SFAI-VRWKTLSTRKVSATSGSASVPDEVFHRAKGVQLCNTQAYQ 339
S + V W L+ + T+GS+ + F + CN QA+Q
Sbjct: 262 SLGVLVHWALLAGPE--KTNGSSPLLVAAFGACSLTRQCNHQAFQ 304
>sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=dnaJ PE=3 SV=1
Length = 386
Score = 35.8 bits (81), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 25/95 (26%)
Query: 197 ETRVKVPRSETIKKCPDCVGRGN------AVCPSCNANQEPEYYKEKQMSQCFNCYGRGL 250
E V V R E CP C G G C CN + +Y + Q N
Sbjct: 146 EKEVTVSRLEI---CPTCSGSGTKPGHQPVTCRQCNGTGQVQYKQRTPFGQIVNV----- 197
Query: 251 IAHKDGSDTICTKCNGKGTI---PCATCGSRGLIK 282
C C+G+G I PC TCG +G ++
Sbjct: 198 --------RTCDVCHGEGKIITNPCETCGGKGRVR 224
>sp|B4F2V6|DNAJ_PROMH Chaperone protein DnaJ OS=Proteus mirabilis (strain HI4320) GN=dnaJ
PE=3 SV=1
Length = 378
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 23/84 (27%)
Query: 239 MSQCFNCYGRGLIAHKDGSDTICTKCNGKGTI-----------PCATCGSRG-LIK--CR 284
+ C C+G G A + S C+ C+G G + PC TC RG +IK C
Sbjct: 143 LETCDKCHGSG--AKEGTSAETCSTCHGAGQVHLRQGFFTVQQPCPTCHGRGKVIKEPCS 200
Query: 285 KCGGSGSLLTRSFAIVRWKTLSTR 308
KC G G + R+KTLS +
Sbjct: 201 KCHGDGR-------VERYKTLSVK 217
>sp|Q892R1|DNAJ_CLOTE Chaperone protein DnaJ OS=Clostridium tetani (strain Massachusetts
/ E88) GN=dnaJ PE=3 SV=1
Length = 375
Score = 35.4 bits (80), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 31/125 (24%)
Query: 173 NGPALG---TWELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRG------NAVCP 223
NGP G + ++L V V E V + +SET C C G G + CP
Sbjct: 112 NGPQKGPDVQYSINLTFNEAVFGV---EKEVSITKSET---CETCTGTGAKPGTNSKTCP 165
Query: 224 SCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTI---PCATCGSRGL 280
CN + + + + + + C C GKGTI PC+ C +G
Sbjct: 166 KCNGSGQIKVQRNTALGSFVSV-------------NTCDMCGGKGTIISDPCSDCKGKGT 212
Query: 281 IKCRK 285
++ +K
Sbjct: 213 VRKQK 217
>sp|Q6NEZ1|DNAJ2_CORDI Chaperone protein DnaJ 2 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=dnaJ2 PE=3
SV=1
Length = 390
Score = 35.4 bits (80), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 18/73 (24%)
Query: 242 CFNCYGRGLIAHKDGSDTICTKCNGKG-----------TIPCATCGSRGLI---KCRKCG 287
C C+G G + G+ T CT+CNG G + PC CG G + C C
Sbjct: 174 CHTCHGSG---SRSGAPTTCTECNGTGFTSENKGAFGFSAPCTQCGGTGKMISDPCPDCS 230
Query: 288 GSGS-LLTRSFAI 299
G+G+ TRS +
Sbjct: 231 GTGTQRRTRSITV 243
>sp|Q5P9E0|DNAJ_ANAMM Chaperone protein DnaJ OS=Anaplasma marginale (strain St. Maries)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 241 QCFNCYGRGLIAHKDGSDTI---CTKCNGKGTIPCATCGSRGLIKCRKCGGSGSL 292
+C NC G G + + G TI C CNG+G + KCR+CGGSG +
Sbjct: 164 KCGNCNGAGSVRTRKGFLTIEEVCNVCNGEGEVIKN--------KCRRCGGSGRV 210
>sp|B9KH92|DNAJ_ANAMF Chaperone protein DnaJ OS=Anaplasma marginale (strain Florida)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 241 QCFNCYGRGLIAHKDGSDTI---CTKCNGKGTIPCATCGSRGLIKCRKCGGSGSL 292
+C NC G G + + G TI C CNG+G + KCR+CGGSG +
Sbjct: 164 KCGNCNGAGSVRTRKGFLTIEEVCNVCNGEGEVIKN--------KCRRCGGSGRV 210
>sp|Q0AIY0|DNAJ_NITEC Chaperone protein DnaJ OS=Nitrosomonas eutropha (strain C91)
GN=dnaJ PE=3 SV=1
Length = 369
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 20/84 (23%)
Query: 197 ETRVKVPRSETIKKCPDCVGRGN------AVCPSCNAN----QEPEYYKEKQMSQCFNCY 246
ET++++PR E C C G G CP+CN + + ++ +Q C +C+
Sbjct: 130 ETKIRIPRQEA---CDTCHGSGAKPGTSPKTCPTCNGHGQVRMQQGFFSIQQT--CSHCH 184
Query: 247 GRGLIAHKDGSDTICTKCNGKGTI 270
G G I SD CT C G G +
Sbjct: 185 GSGKIV----SDP-CTDCQGAGRV 203
>sp|Q97BG9|DNAJ_THEVO Chaperone protein DnaJ OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=dnaJ PE=3
SV=1
Length = 365
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 19/92 (20%)
Query: 217 RGNAVCPSCNANQEPEYYKEKQMSQCFNCYG-------RGLIAHKDGSDTICTKCNGKGT 269
R NA+CP C K ++ C C+G RG + + T C C GKG
Sbjct: 147 RRNAICPDCKGTGA----KNGKLITCPTCHGTGQQRVVRGQGFFRMVTVTTCNTCGGKGR 202
Query: 270 IPCATCGSRGLIKCRKCGGSGSLLTRSFAIVR 301
IP KC +C G+G+++ V+
Sbjct: 203 IPEE--------KCPRCNGTGTIVVDEDITVK 226
>sp|Q89AU7|DNAJ_BUCBP Chaperone protein DnaJ OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=dnaJ PE=3 SV=1
Length = 383
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 20/109 (18%)
Query: 183 DLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQC 242
DLR + +K + T++KCP C G G +P++ C
Sbjct: 122 DLRYDMTLTLEEAVRGTIKEIKIPTLQKCPTCYGYGTKT------GTKPQF--------C 167
Query: 243 FNCYGRGLIAHKDGSDTI---CTKCNGKGTI---PCATCGSRGLIKCRK 285
C G G I + G T+ C +C+G+G PC C G I+ K
Sbjct: 168 PTCRGNGQIQMRKGFFTVQQTCPQCHGEGNFIRDPCRRCHGNGRIEISK 216
>sp|B8CXL0|DNAJ_HALOH Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1
Length = 375
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 25/96 (26%)
Query: 199 RVKVPRSETIKKCPDCVGRGNA------VCPSCNANQEPEYYKEKQMSQCFNCYGRGLIA 252
++ +PR+ET C C G G CP CN + + Y + Q
Sbjct: 136 KITIPRTET---CDTCNGTGAKPGTSPKTCPQCNGSGQVRYTQRTPFGQFAQT------- 185
Query: 253 HKDGSDTICTKCNGKGTI---PCATCGSRGLIKCRK 285
C +C G+GTI PC TC G ++ ++
Sbjct: 186 ------RTCDRCGGRGTIIDDPCPTCQGSGKVRKQR 215
>sp|Q96EY1|DNJA3_HUMAN DnaJ homolog subfamily A member 3, mitochondrial OS=Homo sapiens
GN=DNAJA3 PE=1 SV=2
Length = 480
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 26/86 (30%)
Query: 228 NQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTI---CTKCNGKGTIP------CATCGSR 278
+Q EY+ M FN +G+ +K+ + I C +CNGKG P C CG
Sbjct: 206 DQPQEYF----MELTFNQAAKGV--NKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGS 259
Query: 279 GL-----------IKCRKCGGSGSLL 293
G+ CR+CGG GS++
Sbjct: 260 GMETINTGPFVMRSTCRRCGGRGSII 285
>sp|Q7M9T3|DNAJ_WOLSU Chaperone protein DnaJ OS=Wolinella succinogenes (strain ATCC 29543
/ DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=dnaJ
PE=3 SV=1
Length = 374
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 26/112 (23%)
Query: 179 TWELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQ 238
ELDL + +F +E +++ + CPDC G G KE +
Sbjct: 123 AMELDLSFK-EAIFGCKKEIKIRYKDA-----CPDCKGTGA---------------KEGK 161
Query: 239 MSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSG 290
+ C +C GRG + + G T C C G R KC KC G G
Sbjct: 162 IETCPDCGGRGQVFIRQGFMTFAQTCP-----KCGGSGERIKEKCPKCNGKG 208
>sp|Q99M87|DNJA3_MOUSE DnaJ homolog subfamily A member 3, mitochondrial OS=Mus musculus
GN=Dnaja3 PE=1 SV=1
Length = 480
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 25/108 (23%)
Query: 226 NANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTI---CTKCNGKGTIP------CATCG 276
N +P+ Y M FN +G+ +K+ + I C +C+GKG P C CG
Sbjct: 203 NVFDQPQEYI---MELTFNQAAKGV--NKEFTVNIMDTCERCDGKGNEPGTKVQHCHYCG 257
Query: 277 SRGL-----------IKCRKCGGSGSLLTRSFAIVRWKTLSTRKVSAT 313
G+ CR+CGG GS++T + R + +K T
Sbjct: 258 GSGMETINTGPFVMRSTCRRCGGRGSIITNPCVVCRGAGQAKQKKRVT 305
>sp|P63966|DNAJ2_MYCTU Chaperone protein DnaJ 2 OS=Mycobacterium tuberculosis GN=dnaJ2
PE=3 SV=1
Length = 382
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 259 TICTKCNGKGT------IPCATCGSRGLIKCRKCGGSGSLLT 294
+C +C GKGT IPC TCG RG ++ + G +LT
Sbjct: 143 VLCDRCQGKGTNGDSVPIPCDTCGGRGEVQTVQRSLLGQMLT 184
>sp|P63967|DNAJ2_MYCBO Chaperone protein DnaJ 2 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=dnaJ2 PE=3 SV=1
Length = 382
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 259 TICTKCNGKGT------IPCATCGSRGLIKCRKCGGSGSLLT 294
+C +C GKGT IPC TCG RG ++ + G +LT
Sbjct: 143 VLCDRCQGKGTNGDSVPIPCDTCGGRGEVQTVQRSLLGQMLT 184
>sp|A9L0R7|DNAJ_SHEB9 Chaperone protein DnaJ OS=Shewanella baltica (strain OS195) GN=dnaJ
PE=3 SV=1
Length = 377
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 23/84 (27%)
Query: 239 MSQCFNCYGRGLIAHKDGSDTICTKCNGKGTI-----------PCATCGSRGLI---KCR 284
++ C C G G A K S T C C+G+G + PC TC RG I C
Sbjct: 143 LATCDLCEGSG--AKKGTSATTCGTCHGQGQVQMRQGFFAVQQPCPTCHGRGKIIKDPCS 200
Query: 285 KCGGSGSLLTRSFAIVRWKTLSTR 308
KC G G + + KTLS +
Sbjct: 201 KCHGDGR-------VEKSKTLSVK 217
>sp|C0R562|DNAJ_WOLWR Chaperone protein DnaJ OS=Wolbachia sp. subsp. Drosophila simulans
(strain wRi) GN=dnaJ PE=3 SV=1
Length = 372
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 241 QCFNCYGRGLIAHKDGSDTI---CTKCNGKGTIPCATCGSRGLIKCRKCGGSG 290
QC C G G I + G TI CT C G+G I KC+KCGGSG
Sbjct: 163 QCHTCQGSGRIRTQQGFFTIERTCTTCYGEGEIIQN--------KCKKCGGSG 207
>sp|Q73IV4|DNAJ_WOLPM Chaperone protein DnaJ OS=Wolbachia pipientis wMel GN=dnaJ PE=3
SV=1
Length = 372
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 241 QCFNCYGRGLIAHKDGSDTI---CTKCNGKGTIPCATCGSRGLIKCRKCGGSG 290
QC C G G I + G TI CT C G+G I KC+KCGGSG
Sbjct: 163 QCHTCQGSGRIRTQQGFFTIERTCTTCYGEGEIIQN--------KCKKCGGSG 207
>sp|Q044A8|DNAJ_LACGA Chaperone protein DnaJ OS=Lactobacillus gasseri (strain ATCC 33323
/ DSM 20243) GN=dnaJ PE=3 SV=1
Length = 388
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 13/75 (17%)
Query: 221 VCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGS-------DTICTKCNGKGTI--- 270
VCP+C+ + K C C+G G++ + T C KC G+GTI
Sbjct: 157 VCPTCDGSGAE---KGTHPITCDKCHGTGVMTVTRQTPLGVIQQQTTCDKCGGRGTIIKH 213
Query: 271 PCATCGSRGLIKCRK 285
PC TC +G I ++
Sbjct: 214 PCQTCHGKGTIDKKQ 228
>sp|A6WRU8|DNAJ_SHEB8 Chaperone protein DnaJ OS=Shewanella baltica (strain OS185) GN=dnaJ
PE=3 SV=1
Length = 377
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 23/84 (27%)
Query: 239 MSQCFNCYGRGLIAHKDGSDTICTKCNGKGTI-----------PCATCGSRGLI---KCR 284
++ C C G G A K S T C C+G+G + PC TC RG I C
Sbjct: 143 LATCDLCEGSG--AKKGTSATTCGTCHGQGQVQMRQGFFAVQQPCPTCHGRGKIIKDPCT 200
Query: 285 KCGGSGSLLTRSFAIVRWKTLSTR 308
KC G G + + KTLS +
Sbjct: 201 KCHGDGR-------VEKSKTLSVK 217
>sp|A3D7T3|DNAJ_SHEB5 Chaperone protein DnaJ OS=Shewanella baltica (strain OS155 / ATCC
BAA-1091) GN=dnaJ PE=3 SV=1
Length = 377
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 23/84 (27%)
Query: 239 MSQCFNCYGRGLIAHKDGSDTICTKCNGKGTI-----------PCATCGSRGLI---KCR 284
++ C C G G A K S T C C+G+G + PC TC RG I C
Sbjct: 143 LATCDLCEGSG--AKKGTSATTCGTCHGQGQVQMRQGFFAVQQPCPTCHGRGKIIKDPCT 200
Query: 285 KCGGSGSLLTRSFAIVRWKTLSTR 308
KC G G + + KTLS +
Sbjct: 201 KCHGDGR-------VEKSKTLSVK 217
>sp|B8E4S2|DNAJ_SHEB2 Chaperone protein DnaJ OS=Shewanella baltica (strain OS223) GN=dnaJ
PE=3 SV=1
Length = 377
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 23/84 (27%)
Query: 239 MSQCFNCYGRGLIAHKDGSDTICTKCNGKGTI-----------PCATCGSRGLI---KCR 284
++ C C G G A K S T C C+G+G + PC TC RG I C
Sbjct: 143 LATCDLCEGSG--AKKGTSATTCGTCHGQGQVQMRQGFFAVQQPCPTCHGRGKIIKDPCT 200
Query: 285 KCGGSGSLLTRSFAIVRWKTLSTR 308
KC G G + + KTLS +
Sbjct: 201 KCHGDGR-------VEKSKTLSVK 217
>sp|B8D757|DNAJ_BUCAT Chaperone protein DnaJ OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain Tuc7) GN=dnaJ PE=3 SV=1
Length = 377
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 23/92 (25%)
Query: 200 VKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDT 259
+++P T++KC C G G + C C+G+G I + G T
Sbjct: 137 IQIP---TLQKCKTCYGSGTRTGTKPRS--------------CSTCHGKGQIHIRKGFFT 179
Query: 260 I---CTKCNGKGTI---PCATCGSRGLIKCRK 285
+ C C+GKGTI PC C +G ++ K
Sbjct: 180 VQQSCPTCHGKGTIIADPCNLCHGQGRVETYK 211
>sp|O32465|DNAJ_BUCAI Chaperone protein DnaJ OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=dnaJ PE=3 SV=2
Length = 377
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 23/92 (25%)
Query: 200 VKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDT 259
+++P T++KC C G G + C C+G+G I + G T
Sbjct: 137 IQIP---TLQKCKTCYGSGTRTGTKPRS--------------CSTCHGKGQIHIRKGFFT 179
Query: 260 I---CTKCNGKGTI---PCATCGSRGLIKCRK 285
+ C C+GKGTI PC C +G ++ K
Sbjct: 180 VQQSCPTCHGKGTIITDPCNLCHGQGRVETYK 211
>sp|B8D8V3|DNAJ_BUCA5 Chaperone protein DnaJ OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain 5A) GN=dnaJ PE=3 SV=1
Length = 377
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 23/92 (25%)
Query: 200 VKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDT 259
+++P T++KC C G G + C C+G+G I + G T
Sbjct: 137 IQIP---TLQKCKTCYGSGTRTGTKPRS--------------CSTCHGKGQIHIRKGFFT 179
Query: 260 I---CTKCNGKGTI---PCATCGSRGLIKCRK 285
+ C C+GKGTI PC C +G ++ K
Sbjct: 180 VQQSCPTCHGKGTIITDPCNLCHGQGRVETYK 211
>sp|Q6NG14|DNAJ1_CORDI Chaperone protein DnaJ 1 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=dnaJ1 PE=3
SV=1
Length = 375
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 20/77 (25%)
Query: 242 CFNCYGRGLIAHKDGSDTICTKCNGKGTI---------------PCATCGSRGLI---KC 283
C C G G + +C+ CNG G I PC TC G + C
Sbjct: 140 CDRCEGTG--SKSKSKPNVCSTCNGSGEIQQMQRSFLGNVMTSSPCPTCRGTGEVIPDPC 197
Query: 284 RKCGGSGSLLTRSFAIV 300
KCGG G + T+ IV
Sbjct: 198 DKCGGDGRVRTQRDLIV 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,511,362
Number of Sequences: 539616
Number of extensions: 7463868
Number of successful extensions: 17940
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 304
Number of HSP's that attempted gapping in prelim test: 17571
Number of HSP's gapped (non-prelim): 595
length of query: 428
length of database: 191,569,459
effective HSP length: 120
effective length of query: 308
effective length of database: 126,815,539
effective search space: 39059186012
effective search space used: 39059186012
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)