Query 014222
Match_columns 428
No_of_seqs 330 out of 3163
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 07:40:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014222.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014222hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 100.0 2.3E-43 8E-48 330.6 31.3 265 118-403 11-288 (306)
2 1zgk_A Kelch-like ECH-associat 100.0 3.9E-43 1.3E-47 329.4 31.2 266 118-402 24-302 (308)
3 2xn4_A Kelch-like protein 2; s 100.0 6.9E-43 2.4E-47 326.8 29.9 265 118-402 15-292 (302)
4 2vpj_A Kelch-like protein 12; 100.0 7.7E-42 2.6E-46 319.5 31.3 265 117-401 13-292 (301)
5 4asc_A Kelch repeat and BTB do 100.0 1.7E-41 5.8E-46 319.3 30.2 261 118-399 4-289 (315)
6 2woz_A Kelch repeat and BTB do 100.0 5.8E-41 2E-45 316.1 26.4 260 118-400 15-298 (318)
7 2xn4_A Kelch-like protein 2; s 100.0 9.1E-39 3.1E-43 298.8 26.5 261 87-361 31-302 (302)
8 4asc_A Kelch repeat and BTB do 100.0 5.8E-39 2E-43 302.0 22.0 265 87-366 14-305 (315)
9 2uvk_A YJHT; unknown function, 100.0 2E-38 6.7E-43 303.6 25.7 263 118-399 19-354 (357)
10 3ii7_A Kelch-like protein 7; p 100.0 4.8E-38 1.7E-42 294.4 24.7 250 86-342 24-284 (306)
11 1zgk_A Kelch-like ECH-associat 100.0 1.1E-37 3.8E-42 292.3 26.1 248 85-342 38-299 (308)
12 2woz_A Kelch repeat and BTB do 100.0 5.7E-38 2E-42 295.6 22.8 263 88-365 26-314 (318)
13 2vpj_A Kelch-like protein 12; 100.0 4E-37 1.4E-41 287.5 25.4 249 85-343 30-291 (301)
14 2uvk_A YJHT; unknown function, 100.0 1.2E-35 4.1E-40 284.3 26.8 248 146-413 2-325 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 1.5E-32 5.1E-37 283.9 24.0 243 117-367 396-674 (695)
16 1k3i_A Galactose oxidase precu 100.0 9.9E-33 3.4E-37 284.7 13.3 290 89-404 169-514 (656)
17 2zwa_A Leucine carboxyl methyl 100.0 3.6E-31 1.2E-35 273.6 23.2 219 157-393 389-641 (695)
18 1k3i_A Galactose oxidase precu 100.0 2.1E-29 7E-34 260.0 15.7 277 88-380 221-549 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 98.8 1E-06 3.5E-11 85.6 24.7 272 67-380 18-348 (445)
20 3v7d_B Cell division control p 98.8 5.1E-07 1.7E-11 88.2 20.1 279 67-380 14-381 (464)
21 1p22_A F-BOX/WD-repeat protein 98.8 4.6E-07 1.6E-11 88.0 19.3 274 67-380 10-365 (435)
22 3dsm_A Uncharacterized protein 98.6 2.6E-05 8.7E-10 72.7 25.4 231 118-380 53-302 (328)
23 3dsm_A Uncharacterized protein 98.4 0.00018 6E-09 66.9 26.4 229 121-380 4-253 (328)
24 3mbr_X Glutamine cyclotransfer 98.4 4.7E-05 1.6E-09 67.0 19.4 193 158-369 22-226 (243)
25 1fs1_A SKP2 F-BOX, cyclin A/CD 98.2 6.9E-07 2.4E-11 58.9 2.4 43 66-108 7-49 (53)
26 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0037 1.3E-07 58.8 28.6 220 118-380 53-296 (376)
27 3nol_A Glutamine cyclotransfer 98.1 0.0002 6.8E-09 63.5 17.9 193 158-369 44-247 (262)
28 2e31_A FBS1, F-box only protei 98.0 2E-06 6.8E-11 77.7 2.7 49 65-113 48-97 (297)
29 3nok_A Glutaminyl cyclase; bet 97.9 0.00025 8.4E-09 63.0 14.9 189 159-369 57-257 (268)
30 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.0085 2.9E-07 56.3 26.1 208 118-367 143-368 (376)
31 1l0q_A Surface layer protein; 97.9 0.00043 1.5E-08 65.4 16.6 223 119-380 2-233 (391)
32 1rwi_B Serine/threonine-protei 97.8 0.0057 2E-07 54.2 22.4 226 118-380 34-264 (270)
33 3mbr_X Glutamine cyclotransfer 97.8 0.0026 8.8E-08 55.8 19.1 152 210-380 25-179 (243)
34 2iwa_A Glutamine cyclotransfer 97.7 0.0081 2.8E-07 53.6 21.7 193 159-369 23-228 (266)
35 2ojh_A Uncharacterized protein 97.7 0.0051 1.8E-07 54.8 20.1 230 130-395 20-266 (297)
36 2hqs_A Protein TOLB; TOLB, PAL 97.7 0.0078 2.7E-07 57.6 22.2 220 132-380 159-387 (415)
37 1q7f_A NHL, brain tumor CG1071 97.7 0.029 1E-06 50.1 26.6 233 118-380 40-280 (286)
38 3vgz_A Uncharacterized protein 97.6 0.014 4.7E-07 53.8 22.6 232 118-380 52-303 (353)
39 1l0q_A Surface layer protein; 97.6 0.0017 6E-08 61.1 16.5 223 118-380 43-275 (391)
40 3bws_A Protein LP49; two-domai 97.6 0.0034 1.2E-07 60.0 18.4 217 132-380 101-334 (433)
41 3nol_A Glutamine cyclotransfer 97.6 0.0028 9.4E-08 56.2 15.5 155 210-380 47-201 (262)
42 2z2n_A Virginiamycin B lyase; 97.5 0.046 1.6E-06 48.8 24.3 224 118-380 67-295 (299)
43 3bws_A Protein LP49; two-domai 97.5 0.0032 1.1E-07 60.2 16.8 193 118-333 133-337 (433)
44 1gxr_A ESG1, transducin-like e 97.5 0.011 3.6E-07 54.0 19.6 218 132-380 72-296 (337)
45 2z2n_A Virginiamycin B lyase; 97.5 0.05 1.7E-06 48.6 23.8 224 118-379 25-254 (299)
46 2qc5_A Streptogramin B lactona 97.5 0.054 1.8E-06 48.4 23.6 224 118-379 30-259 (300)
47 1ri6_A Putative isomerase YBHE 97.4 0.0046 1.6E-07 56.7 16.5 244 118-397 49-320 (343)
48 2qc5_A Streptogramin B lactona 97.4 0.043 1.5E-06 49.1 22.7 222 118-379 72-299 (300)
49 3nok_A Glutaminyl cyclase; bet 97.4 0.0067 2.3E-07 53.8 15.7 153 209-380 58-210 (268)
50 3u4y_A Uncharacterized protein 97.4 0.015 5.1E-07 53.2 19.1 230 118-380 9-252 (331)
51 1k8k_C P40, ARP2/3 complex 41 97.4 0.019 6.4E-07 53.2 20.0 210 132-366 30-263 (372)
52 1rwi_B Serine/threonine-protei 97.4 0.022 7.4E-07 50.4 19.4 191 160-380 27-222 (270)
53 2ovr_B FBW7, F-BOX/WD repeat p 97.3 0.046 1.6E-06 52.4 22.9 212 133-380 180-391 (445)
54 4ery_A WD repeat-containing pr 97.3 0.044 1.5E-06 49.6 21.6 217 133-380 46-268 (312)
55 2hqs_A Protein TOLB; TOLB, PAL 97.3 0.021 7.1E-07 54.6 19.9 188 130-338 201-395 (415)
56 3scy_A Hypothetical bacterial 97.3 0.03 1E-06 51.9 20.5 239 118-380 61-339 (361)
57 4aez_A CDC20, WD repeat-contai 97.3 0.027 9.1E-07 53.3 20.0 216 133-380 157-380 (401)
58 4aez_A CDC20, WD repeat-contai 97.2 0.023 8E-07 53.8 19.2 186 119-334 104-297 (401)
59 2iwa_A Glutamine cyclotransfer 97.2 0.02 6.9E-07 51.0 17.4 153 209-380 24-181 (266)
60 3ow8_A WD repeat-containing pr 97.2 0.022 7.5E-07 52.3 18.5 185 169-380 93-279 (321)
61 3scy_A Hypothetical bacterial 97.2 0.035 1.2E-06 51.5 20.1 99 132-243 29-130 (361)
62 3v7d_B Cell division control p 97.2 0.099 3.4E-06 50.2 23.9 185 165-378 278-463 (464)
63 1gxr_A ESG1, transducin-like e 97.2 0.022 7.4E-07 51.8 18.3 204 133-369 120-328 (337)
64 3jrp_A Fusion protein of prote 97.2 0.02 6.9E-07 53.0 17.5 189 169-380 24-240 (379)
65 1q7f_A NHL, brain tumor CG1071 97.1 0.11 3.8E-06 46.3 21.8 196 161-380 34-238 (286)
66 3jro_A Fusion protein of prote 97.1 0.019 6.4E-07 59.6 18.7 233 133-396 32-295 (753)
67 3jrp_A Fusion protein of prote 97.1 0.031 1.1E-06 51.7 18.7 224 133-379 34-286 (379)
68 3hfq_A Uncharacterized protein 97.1 0.035 1.2E-06 51.2 18.8 241 118-380 50-319 (347)
69 3v9f_A Two-component system se 97.1 0.029 1E-06 58.4 20.1 218 132-380 427-656 (781)
70 3dwl_C Actin-related protein 2 97.1 0.016 5.6E-07 54.0 16.6 220 133-380 34-281 (377)
71 3bg1_A Protein SEC13 homolog; 97.1 0.027 9.3E-07 51.4 17.5 237 133-403 36-310 (316)
72 2pm7_B Protein transport prote 97.1 0.1 3.4E-06 47.0 21.1 230 133-397 32-296 (297)
73 4g56_B MGC81050 protein; prote 97.1 0.016 5.5E-07 54.1 16.0 219 133-380 116-343 (357)
74 2vdu_B TRNA (guanine-N(7)-)-me 97.1 0.049 1.7E-06 52.4 19.9 196 162-380 155-393 (450)
75 3no2_A Uncharacterized protein 97.1 0.061 2.1E-06 48.2 19.1 213 118-365 4-230 (276)
76 3azo_A Aminopeptidase; POP fam 97.0 0.23 7.9E-06 50.2 24.8 238 131-380 101-369 (662)
77 4ery_A WD repeat-containing pr 97.0 0.032 1.1E-06 50.5 16.5 182 169-380 36-223 (312)
78 4a2l_A BT_4663, two-component 97.0 0.059 2E-06 56.2 20.5 216 133-380 428-659 (795)
79 4gqb_B Methylosome protein 50; 96.9 0.024 8.1E-07 52.7 15.7 217 133-380 104-331 (344)
80 3ow8_A WD repeat-containing pr 96.9 0.12 4.1E-06 47.3 20.1 209 133-377 103-318 (321)
81 4gga_A P55CDC, cell division c 96.9 0.064 2.2E-06 51.0 18.6 181 133-335 126-315 (420)
82 1got_B GT-beta; complex (GTP-b 96.9 0.26 9E-06 45.2 22.2 216 133-380 78-301 (340)
83 2ojh_A Uncharacterized protein 96.9 0.083 2.9E-06 46.6 18.3 189 133-338 63-266 (297)
84 1k8k_C P40, ARP2/3 complex 41 96.9 0.1 3.5E-06 48.1 19.4 187 133-339 75-285 (372)
85 1r5m_A SIR4-interacting protei 96.8 0.16 5.6E-06 47.5 21.1 215 133-380 131-361 (425)
86 1p22_A F-BOX/WD-repeat protein 96.8 0.048 1.6E-06 52.2 17.1 184 165-380 141-325 (435)
87 1ijq_A LDL receptor, low-densi 96.8 0.29 1E-05 44.6 25.2 213 133-380 11-238 (316)
88 3vgz_A Uncharacterized protein 96.8 0.3 1E-05 44.5 24.3 194 118-335 100-308 (353)
89 3vl1_A 26S proteasome regulato 96.8 0.16 5.4E-06 47.9 20.4 215 133-380 79-322 (420)
90 3u4y_A Uncharacterized protein 96.8 0.082 2.8E-06 48.1 17.8 236 118-380 51-304 (331)
91 3hfq_A Uncharacterized protein 96.8 0.034 1.2E-06 51.2 15.3 185 184-380 18-220 (347)
92 2aq5_A Coronin-1A; WD40 repeat 96.7 0.036 1.2E-06 52.4 15.4 148 169-332 145-301 (402)
93 3v9f_A Two-component system se 96.7 0.14 4.9E-06 53.1 21.2 216 134-380 385-611 (781)
94 1sq9_A Antiviral protein SKI8; 96.7 0.21 7E-06 46.6 20.4 109 215-332 197-324 (397)
95 3k26_A Polycomb protein EED; W 96.7 0.099 3.4E-06 48.0 17.7 105 120-244 86-194 (366)
96 1jmx_B Amine dehydrogenase; ox 96.7 0.14 4.9E-06 46.6 18.7 156 118-291 10-179 (349)
97 3mkq_A Coatomer beta'-subunit; 96.7 0.13 4.3E-06 53.5 20.3 215 133-380 36-259 (814)
98 3fm0_A Protein CIAO1; WDR39,SG 96.7 0.037 1.3E-06 51.2 14.6 192 162-374 22-221 (345)
99 3fvz_A Peptidyl-glycine alpha- 96.7 0.38 1.3E-05 43.9 24.3 224 133-380 70-322 (329)
100 1got_B GT-beta; complex (GTP-b 96.6 0.13 4.3E-06 47.4 18.2 181 163-370 150-335 (340)
101 1pjx_A Dfpase, DIISOPROPYLFLUO 96.6 0.18 6.2E-06 45.3 19.0 226 132-380 46-299 (314)
102 3ei3_B DNA damage-binding prot 96.6 0.16 5.6E-06 47.2 19.1 185 169-380 87-282 (383)
103 3f3f_A Nucleoporin SEH1; struc 96.6 0.37 1.3E-05 43.4 21.5 146 169-331 72-250 (351)
104 1vyh_C Platelet-activating fac 96.6 0.17 5.6E-06 48.1 19.1 212 133-380 131-369 (410)
105 1ri6_A Putative isomerase YBHE 96.6 0.14 4.6E-06 46.6 17.8 194 118-334 4-215 (343)
106 1r5m_A SIR4-interacting protei 96.6 0.053 1.8E-06 51.0 15.4 149 161-332 211-363 (425)
107 3e5z_A Putative gluconolactona 96.5 0.064 2.2E-06 48.2 14.9 191 161-380 32-246 (296)
108 3fm0_A Protein CIAO1; WDR39,SG 96.5 0.14 4.9E-06 47.1 17.6 178 133-328 39-223 (345)
109 4g56_B MGC81050 protein; prote 96.5 0.14 4.8E-06 47.5 17.6 193 161-380 99-301 (357)
110 2pm7_B Protein transport prote 96.5 0.26 8.9E-06 44.2 18.9 187 169-380 22-238 (297)
111 1sq9_A Antiviral protein SKI8; 96.5 0.24 8.2E-06 46.1 19.2 218 133-380 37-322 (397)
112 4ggc_A P55CDC, cell division c 96.4 0.47 1.6E-05 42.4 20.4 229 121-380 38-273 (318)
113 3jro_A Fusion protein of prote 96.4 0.048 1.6E-06 56.5 15.1 189 169-380 22-238 (753)
114 2pm9_A Protein WEB1, protein t 96.4 0.34 1.2E-05 45.3 20.2 219 133-380 90-337 (416)
115 3vl1_A 26S proteasome regulato 96.4 0.66 2.3E-05 43.5 24.2 217 133-380 120-365 (420)
116 2hes_X YDR267CP; beta-propelle 96.4 0.2 6.7E-06 45.9 17.4 231 133-393 35-286 (330)
117 3i2n_A WD repeat-containing pr 96.4 0.1 3.4E-06 47.8 15.5 189 118-331 30-244 (357)
118 3v65_B Low-density lipoprotein 96.3 0.71 2.4E-05 43.4 23.2 213 132-379 96-317 (386)
119 2xdw_A Prolyl endopeptidase; a 96.3 0.91 3.1E-05 46.4 24.0 232 132-380 151-414 (710)
120 2bkl_A Prolyl endopeptidase; m 96.3 0.76 2.6E-05 46.9 23.3 243 131-394 146-404 (695)
121 3k26_A Polycomb protein EED; W 96.3 0.13 4.3E-06 47.2 15.9 139 133-289 45-194 (366)
122 2dg1_A DRP35, lactonase; beta 96.3 0.27 9.2E-06 44.7 18.0 203 161-380 49-263 (333)
123 3lrv_A PRE-mRNA-splicing facto 96.3 0.66 2.3E-05 42.4 20.9 148 169-335 140-299 (343)
124 3zwl_B Eukaryotic translation 96.3 0.52 1.8E-05 43.0 19.9 220 133-380 55-304 (369)
125 4e54_B DNA damage-binding prot 96.3 0.28 9.6E-06 46.8 18.6 186 119-331 132-328 (435)
126 1yfq_A Cell cycle arrest prote 96.2 0.4 1.4E-05 43.5 18.8 174 133-331 34-226 (342)
127 3no2_A Uncharacterized protein 96.2 0.43 1.5E-05 42.6 18.4 187 169-392 6-202 (276)
128 1vyh_C Platelet-activating fac 96.2 0.22 7.5E-06 47.2 17.2 144 169-334 121-269 (410)
129 2pbi_B Guanine nucleotide-bind 96.2 0.45 1.5E-05 44.0 19.0 176 169-371 167-350 (354)
130 1nir_A Nitrite reductase; hemo 96.2 0.21 7.1E-06 49.5 17.5 223 132-380 200-458 (543)
131 1erj_A Transcriptional repress 96.2 0.51 1.8E-05 44.2 19.6 214 133-376 146-387 (393)
132 4gqb_B Methylosome protein 50; 96.1 0.18 6.3E-06 46.6 15.7 191 162-380 88-289 (344)
133 3g4e_A Regucalcin; six bladed 96.1 0.32 1.1E-05 43.7 16.9 193 118-335 24-234 (297)
134 1pjx_A Dfpase, DIISOPROPYLFLUO 96.1 0.26 8.8E-06 44.3 16.3 191 119-332 83-301 (314)
135 3c5m_A Oligogalacturonate lyas 96.0 0.17 5.8E-06 47.1 15.6 197 183-394 167-391 (396)
136 2pbi_B Guanine nucleotide-bind 96.0 0.65 2.2E-05 42.8 19.4 217 133-380 87-315 (354)
137 3dwl_C Actin-related protein 2 96.0 0.021 7.1E-07 53.3 9.0 147 169-332 24-179 (377)
138 2pm9_A Protein WEB1, protein t 96.0 0.35 1.2E-05 45.3 17.5 182 133-332 137-339 (416)
139 1pby_B Quinohemoprotein amine 96.0 0.27 9.3E-06 44.4 16.3 145 132-291 11-167 (337)
140 3zwl_B Eukaryotic translation 96.0 0.41 1.4E-05 43.7 17.7 220 133-380 97-346 (369)
141 1nir_A Nitrite reductase; hemo 95.9 0.48 1.6E-05 46.9 18.9 247 118-397 148-417 (543)
142 2aq5_A Coronin-1A; WD40 repeat 95.9 1.1 3.7E-05 41.9 22.9 148 169-332 95-256 (402)
143 3odt_A Protein DOA1; ubiquitin 95.9 0.83 2.8E-05 40.5 19.8 141 215-380 154-296 (313)
144 3mkq_A Coatomer beta'-subunit; 95.9 0.15 5.1E-06 52.9 15.9 186 169-380 26-217 (814)
145 1w6s_A Methanol dehydrogenase 95.9 1.2 4.1E-05 44.6 21.7 119 118-249 62-200 (599)
146 3odt_A Protein DOA1; ubiquitin 95.9 0.85 2.9E-05 40.5 20.2 214 133-380 40-255 (313)
147 4a2l_A BT_4663, two-component 95.9 1.7 5.9E-05 45.0 23.8 216 133-380 63-291 (795)
148 3mmy_A MRNA export factor; mRN 95.9 0.38 1.3E-05 43.9 17.1 185 120-331 55-248 (368)
149 2z3z_A Dipeptidyl aminopeptida 95.9 0.61 2.1E-05 47.4 20.1 184 183-380 234-435 (706)
150 1kb0_A Quinohemoprotein alcoho 95.9 1.6 5.5E-05 44.4 22.9 117 118-248 77-207 (677)
151 2p4o_A Hypothetical protein; p 95.9 0.96 3.3E-05 40.7 24.6 189 118-330 42-242 (306)
152 1npe_A Nidogen, entactin; glyc 95.9 0.85 2.9E-05 40.0 22.8 216 133-380 11-238 (267)
153 4aow_A Guanine nucleotide-bind 95.8 0.83 2.8E-05 41.2 19.0 151 162-332 92-248 (340)
154 3pe7_A Oligogalacturonate lyas 95.8 0.49 1.7E-05 43.9 17.7 205 122-339 50-282 (388)
155 3bg1_A Protein SEC13 homolog; 95.8 0.21 7.1E-06 45.4 14.5 189 169-380 26-247 (316)
156 3lrv_A PRE-mRNA-splicing facto 95.7 1.2 4E-05 40.7 22.5 153 215-392 138-299 (343)
157 4a11_B DNA excision repair pro 95.7 0.96 3.3E-05 41.9 19.3 100 169-288 113-219 (408)
158 2fp8_A Strictosidine synthase; 95.7 0.34 1.2E-05 44.1 15.6 195 118-331 91-314 (322)
159 3p5b_L Low density lipoprotein 95.7 1.5 5.1E-05 41.4 24.8 214 132-380 92-320 (400)
160 3m0c_C LDL receptor, low-densi 95.7 1.7 5.7E-05 45.1 22.1 209 133-378 405-630 (791)
161 1ijq_A LDL receptor, low-densi 95.6 0.51 1.7E-05 43.0 16.5 172 184-380 10-195 (316)
162 3pe7_A Oligogalacturonate lyas 95.6 0.49 1.7E-05 43.9 16.8 196 183-380 167-384 (388)
163 1n7d_A LDL receptor, low-densi 95.6 0.2 7E-06 51.3 15.1 213 133-380 387-614 (699)
164 3iuj_A Prolyl endopeptidase; h 95.6 2.3 8E-05 43.3 24.2 240 132-395 155-413 (693)
165 2hes_X YDR267CP; beta-propelle 95.6 0.49 1.7E-05 43.1 16.4 198 162-380 113-328 (330)
166 3e5z_A Putative gluconolactona 95.6 1.2 4E-05 39.7 21.5 226 119-380 40-286 (296)
167 3azo_A Aminopeptidase; POP fam 95.6 0.58 2E-05 47.2 18.3 190 132-337 161-376 (662)
168 2xbg_A YCF48-like protein; pho 95.6 1.4 4.7E-05 40.3 24.0 224 118-377 89-319 (327)
169 4e54_B DNA damage-binding prot 95.5 0.1 3.5E-06 49.9 11.9 144 169-332 133-284 (435)
170 2dg1_A DRP35, lactonase; beta 95.4 0.23 7.8E-06 45.2 13.4 114 215-336 55-177 (333)
171 2ynn_A Coatomer subunit beta'; 95.4 1.4 4.8E-05 39.4 20.6 213 133-380 36-259 (304)
172 1pgu_A Actin interacting prote 95.4 0.76 2.6E-05 45.5 18.1 104 218-334 175-287 (615)
173 2bkl_A Prolyl endopeptidase; m 95.4 2.8 9.5E-05 42.6 22.8 252 118-380 79-351 (695)
174 1kv9_A Type II quinohemoprotei 95.3 2.8 9.7E-05 42.5 22.8 117 118-248 66-195 (668)
175 3ott_A Two-component system se 95.3 1.4 4.7E-05 45.5 20.3 214 133-380 393-626 (758)
176 3sfz_A APAF-1, apoptotic pepti 95.3 0.27 9.1E-06 53.9 15.6 218 133-380 984-1207(1249)
177 3v65_B Low-density lipoprotein 95.3 0.52 1.8E-05 44.4 15.7 173 185-380 97-277 (386)
178 2ad6_A Methanol dehydrogenase 95.3 2.6 8.9E-05 41.9 23.9 118 118-248 62-193 (571)
179 3v64_C Agrin; beta propeller, 95.3 0.82 2.8E-05 42.3 16.8 173 185-380 54-234 (349)
180 3g4e_A Regucalcin; six bladed 95.2 0.41 1.4E-05 42.9 14.2 184 169-380 26-229 (297)
181 1erj_A Transcriptional repress 95.2 0.41 1.4E-05 44.9 14.7 150 162-331 129-288 (393)
182 1npe_A Nidogen, entactin; glyc 95.1 1.6 5.3E-05 38.3 21.4 191 118-334 47-242 (267)
183 2ecf_A Dipeptidyl peptidase IV 95.1 0.9 3.1E-05 46.5 18.0 99 279-380 264-369 (741)
184 1yr2_A Prolyl oligopeptidase; 95.1 3.6 0.00012 42.2 23.7 232 132-380 189-441 (741)
185 4gga_A P55CDC, cell division c 95.0 0.53 1.8E-05 44.5 15.1 178 185-380 126-310 (420)
186 1jmx_B Amine dehydrogenase; ox 95.0 0.25 8.5E-06 45.0 12.4 147 214-380 9-175 (349)
187 3o4h_A Acylamino-acid-releasin 95.0 1.8 6.1E-05 42.9 19.5 216 131-380 89-315 (582)
188 3ei3_B DNA damage-binding prot 95.0 1 3.5E-05 41.6 16.7 175 133-332 97-284 (383)
189 3v64_C Agrin; beta propeller, 95.0 2.2 7.7E-05 39.3 25.5 209 133-378 54-273 (349)
190 1qks_A Cytochrome CD1 nitrite 94.9 1.4 4.8E-05 43.8 18.3 249 118-397 166-436 (567)
191 2z3z_A Dipeptidyl aminopeptida 94.8 1.7 5.8E-05 44.1 19.2 191 130-332 233-437 (706)
192 2ynn_A Coatomer subunit beta'; 94.8 1.2 4E-05 39.9 16.2 142 169-331 26-173 (304)
193 3l2o_B F-box only protein 4; s 94.8 0.0087 3E-07 53.5 1.5 45 67-111 4-48 (312)
194 3fvz_A Peptidyl-glycine alpha- 94.8 2.3 7.8E-05 38.6 23.6 197 118-330 101-322 (329)
195 4a11_B DNA excision repair pro 94.8 0.29 9.9E-06 45.6 12.3 144 169-331 57-219 (408)
196 1yfq_A Cell cycle arrest prote 94.7 1.4 4.7E-05 39.8 16.5 183 169-379 24-226 (342)
197 2ghs_A AGR_C_1268P; regucalcin 94.6 2.2 7.5E-05 38.7 17.6 188 118-334 60-264 (326)
198 4h5i_A Guanine nucleotide-exch 94.6 2.8 9.7E-05 38.7 19.1 178 184-380 157-343 (365)
199 2fp8_A Strictosidine synthase; 94.5 0.98 3.4E-05 40.9 14.9 178 184-380 40-269 (322)
200 3c5m_A Oligogalacturonate lyas 94.5 2.4 8.1E-05 39.1 17.9 194 131-337 167-391 (396)
201 3sfz_A APAF-1, apoptotic pepti 94.5 0.48 1.6E-05 51.8 14.7 211 133-378 1026-1247(1249)
202 3dm0_A Maltose-binding peripla 94.5 1.5 5E-05 44.6 17.6 188 162-380 436-632 (694)
203 2hz6_A Endoplasmic reticulum t 94.4 0.046 1.6E-06 51.3 5.7 141 166-335 8-156 (369)
204 1pgu_A Actin interacting prote 94.2 3.1 0.00011 40.9 19.1 142 216-379 456-613 (615)
205 3iz6_a 40S ribosomal protein R 94.2 3.5 0.00012 38.1 18.6 178 133-331 181-376 (380)
206 2ymu_A WD-40 repeat protein; u 94.1 2.3 7.9E-05 41.7 17.8 179 162-370 391-572 (577)
207 1qks_A Cytochrome CD1 nitrite 94.1 1.9 6.5E-05 42.8 16.9 226 133-380 219-477 (567)
208 3frx_A Guanine nucleotide-bind 94.1 3.2 0.00011 37.3 18.1 217 133-380 88-317 (319)
209 3hrp_A Uncharacterized protein 94.0 4.1 0.00014 38.4 19.2 152 160-331 134-299 (409)
210 4ggc_A P55CDC, cell division c 94.0 3 0.0001 36.9 18.2 218 133-380 90-315 (318)
211 3i2n_A WD repeat-containing pr 94.0 3.4 0.00012 37.2 19.0 149 169-333 32-202 (357)
212 1pby_B Quinohemoprotein amine 94.0 0.43 1.5E-05 43.0 11.3 138 184-334 11-167 (337)
213 2vdu_B TRNA (guanine-N(7)-)-me 94.0 4.4 0.00015 38.4 19.4 152 168-335 210-398 (450)
214 3iz6_a 40S ribosomal protein R 93.8 4.1 0.00014 37.7 18.0 177 185-380 181-375 (380)
215 3p5b_L Low density lipoprotein 93.8 1.3 4.4E-05 41.9 14.4 172 185-380 93-277 (400)
216 2xyi_A Probable histone-bindin 93.8 1.4 4.7E-05 41.8 14.9 151 160-330 185-353 (430)
217 2xbg_A YCF48-like protein; pho 93.6 4.1 0.00014 37.0 25.8 234 118-394 46-286 (327)
218 3hxj_A Pyrrolo-quinoline quino 93.6 3.5 0.00012 36.9 16.8 198 134-380 80-284 (330)
219 2ymu_A WD-40 repeat protein; u 93.6 4.5 0.00016 39.5 18.8 210 133-380 326-539 (577)
220 3frx_A Guanine nucleotide-bind 93.6 4 0.00014 36.7 17.8 141 169-332 78-229 (319)
221 3m0c_C LDL receptor, low-densi 93.5 1.7 5.9E-05 45.0 15.9 173 185-380 405-589 (791)
222 2ecf_A Dipeptidyl peptidase IV 93.5 7.4 0.00025 39.5 22.9 102 234-337 264-375 (741)
223 2ece_A 462AA long hypothetical 93.5 4.2 0.00014 38.9 17.1 118 115-244 22-175 (462)
224 3o4h_A Acylamino-acid-releasin 93.4 2.8 9.6E-05 41.4 17.0 138 183-334 89-231 (582)
225 3hxj_A Pyrrolo-quinoline quino 93.4 1.4 4.8E-05 39.6 13.7 176 118-336 30-211 (330)
226 2oiz_A Aromatic amine dehydrog 93.4 3.3 0.00011 38.3 16.4 116 118-245 15-143 (361)
227 3dr2_A Exported gluconolactona 93.1 1.9 6.6E-05 38.6 14.0 184 169-380 58-267 (305)
228 2ast_B S-phase kinase-associat 93.0 0.032 1.1E-06 51.4 1.7 41 66-106 7-47 (336)
229 1w6s_A Methanol dehydrogenase 93.0 8.1 0.00028 38.5 21.4 118 162-294 58-200 (599)
230 2p4o_A Hypothetical protein; p 92.9 3.4 0.00011 37.0 15.4 158 209-380 35-198 (306)
231 2ad6_A Methanol dehydrogenase 92.8 2.1 7.2E-05 42.6 14.9 116 209-335 56-192 (571)
232 1n7d_A LDL receptor, low-densi 92.7 0.46 1.6E-05 48.7 10.0 175 184-380 386-571 (699)
233 1kb0_A Quinohemoprotein alcoho 92.4 10 0.00036 38.4 24.4 115 163-293 74-207 (677)
234 2gop_A Trilobed protease; beta 92.3 4.6 0.00016 36.4 15.7 213 131-377 42-290 (347)
235 1itv_A MMP9; adaptive molecula 92.2 4.4 0.00015 33.8 14.0 143 211-380 12-174 (195)
236 3tc9_A Hypothetical hydrolase; 92.0 8.5 0.00029 36.5 17.5 193 118-337 149-377 (430)
237 1yiq_A Quinohemoprotein alcoho 92.0 12 0.0004 38.0 24.9 115 163-293 67-200 (689)
238 3hrp_A Uncharacterized protein 91.9 8.3 0.00029 36.2 23.8 195 118-337 141-361 (409)
239 2hz6_A Endoplasmic reticulum t 91.9 0.16 5.4E-06 47.6 5.0 140 117-292 8-156 (369)
240 1k32_A Tricorn protease; prote 91.8 16 0.00053 39.1 21.3 225 120-380 215-461 (1045)
241 1flg_A Protein (quinoprotein e 91.8 11 0.00038 37.4 22.6 116 118-247 68-200 (582)
242 2mad_H Methylamine dehydrogena 91.6 8.6 0.00029 35.7 23.3 115 118-245 32-159 (373)
243 4aow_A Guanine nucleotide-bind 91.5 7.3 0.00025 34.7 20.0 146 217-380 186-337 (340)
244 1yiq_A Quinohemoprotein alcoho 91.3 3.4 0.00012 42.1 14.6 114 210-335 65-199 (689)
245 2xdw_A Prolyl endopeptidase; a 91.2 14 0.00048 37.5 25.1 253 118-380 83-368 (710)
246 1qhu_A Protein (hemopexin); be 91.0 11 0.00038 36.0 21.1 210 119-380 159-438 (460)
247 2xyi_A Probable histone-bindin 91.0 3.1 0.00011 39.3 13.4 145 218-380 196-353 (430)
248 4a0p_A LRP6, LRP-6, low-densit 90.7 15 0.0005 36.9 22.9 211 133-380 16-237 (628)
249 3ju4_A Endo-N-acetylneuraminid 90.6 11 0.00037 35.1 16.2 171 195-367 271-481 (670)
250 2xzm_R RACK1; ribosome, transl 90.6 9.5 0.00033 34.4 20.6 140 169-330 89-244 (343)
251 3gre_A Serine/threonine-protei 90.6 9.1 0.00031 35.8 16.2 106 215-332 181-294 (437)
252 1itv_A MMP9; adaptive molecula 90.4 7 0.00024 32.6 14.5 140 161-332 11-176 (195)
253 3dm0_A Maltose-binding peripla 90.4 16 0.00055 36.8 21.2 175 133-333 453-635 (694)
254 1kv9_A Type II quinohemoprotei 90.4 16 0.00056 36.8 24.5 116 162-293 62-195 (668)
255 3sov_A LRP-6, low-density lipo 90.3 10 0.00035 34.3 20.1 180 169-380 48-238 (318)
256 3dr2_A Exported gluconolactona 90.2 9.5 0.00032 33.9 18.3 197 119-337 57-274 (305)
257 3mmy_A MRNA export factor; mRN 90.1 10 0.00035 34.0 17.7 141 169-331 55-200 (368)
258 3ott_A Two-component system se 89.9 19 0.00064 36.8 24.7 179 163-380 69-260 (758)
259 3oyo_A Hemopexin fold protein 89.9 7.5 0.00026 33.3 13.4 138 166-329 13-197 (225)
260 3f3f_A Nucleoporin SEH1; struc 89.8 10 0.00035 33.5 20.4 189 169-380 24-249 (351)
261 1yr2_A Prolyl oligopeptidase; 89.6 20 0.00067 36.6 23.2 249 118-380 118-395 (741)
262 2gop_A Trilobed protease; beta 89.5 11 0.00039 33.7 18.2 188 118-327 70-290 (347)
263 4h5i_A Guanine nucleotide-exch 89.5 12 0.00042 34.2 17.2 177 132-330 157-343 (365)
264 2p1m_B Transport inhibitor res 89.3 0.085 2.9E-06 52.7 0.6 36 66-101 4-40 (594)
265 1xfd_A DIP, dipeptidyl aminope 89.0 20 0.0007 36.0 18.5 60 234-293 229-295 (723)
266 1pex_A Collagenase-3, MMP-13; 88.8 9.9 0.00034 32.0 19.5 145 161-334 28-196 (207)
267 1nr0_A Actin interacting prote 88.5 20 0.0007 35.4 20.0 184 170-380 162-355 (611)
268 2xzm_R RACK1; ribosome, transl 88.5 14 0.00047 33.4 16.9 141 215-378 87-242 (343)
269 3c75_H MADH, methylamine dehyd 88.5 17 0.00058 34.4 17.1 116 118-245 84-212 (426)
270 1pex_A Collagenase-3, MMP-13; 88.5 10 0.00035 31.9 18.6 143 211-380 29-192 (207)
271 2ghs_A AGR_C_1268P; regucalcin 87.7 15 0.00052 33.0 19.8 140 168-329 61-209 (326)
272 4a0p_A LRP6, LRP-6, low-densit 87.6 24 0.00084 35.3 20.0 174 185-380 16-197 (628)
273 1k32_A Tricorn protease; prote 87.3 30 0.001 36.9 19.0 141 185-337 318-468 (1045)
274 3tc9_A Hypothetical hydrolase; 87.3 5.7 0.00019 37.8 12.0 135 215-368 149-291 (430)
275 3iuj_A Prolyl endopeptidase; h 86.8 28 0.00096 35.1 23.4 186 183-380 154-359 (693)
276 1su3_A Interstitial collagenas 86.3 24 0.00081 33.7 15.7 143 161-335 267-437 (450)
277 3sjl_D Methylamine dehydrogena 85.3 24 0.00082 32.9 17.8 75 118-197 89-173 (386)
278 3b7f_A Glycosyl hydrolase, BNR 85.2 23 0.0008 32.7 23.0 195 118-338 22-270 (394)
279 3gre_A Serine/threonine-protei 85.2 24 0.00082 32.8 20.4 147 169-332 183-361 (437)
280 3dw8_B Serine/threonine-protei 85.2 24 0.00082 32.7 17.6 149 215-380 188-373 (447)
281 1nr0_A Actin interacting prote 85.0 32 0.0011 34.0 22.1 179 133-336 171-361 (611)
282 1flg_A Protein (quinoprotein e 84.9 11 0.00037 37.4 13.1 115 209-335 62-200 (582)
283 3s94_A LRP-6, low-density lipo 84.6 25 0.00086 35.1 15.6 177 184-380 18-202 (619)
284 1xfd_A DIP, dipeptidyl aminope 84.4 32 0.0011 34.5 16.8 68 133-201 38-108 (723)
285 3oyo_A Hemopexin fold protein 83.9 19 0.00066 30.7 14.2 63 309-379 127-197 (225)
286 3dw8_B Serine/threonine-protei 83.7 21 0.00073 33.1 14.3 66 311-380 240-315 (447)
287 3lp9_A LS-24; SEED albumin, pl 83.1 12 0.00042 32.0 11.0 60 264-331 129-202 (227)
288 3b7f_A Glycosyl hydrolase, BNR 82.7 30 0.001 32.0 25.2 201 118-338 67-330 (394)
289 3sre_A PON1, serum paraoxonase 82.5 26 0.00087 32.3 13.6 188 132-329 83-297 (355)
290 4hw6_A Hypothetical protein, I 82.0 35 0.0012 32.2 19.5 190 119-336 153-379 (433)
291 3c7x_A Matrix metalloproteinas 82.0 21 0.00072 29.7 14.0 138 162-332 11-177 (196)
292 3ogk_B Coronatine-insensitive 81.2 0.36 1.2E-05 48.1 0.5 35 68-102 13-48 (592)
293 3vu4_A KMHSV2; beta-propeller 80.2 34 0.0012 30.9 17.7 64 309-380 206-271 (355)
294 1z68_A Fibroblast activation p 80.1 52 0.0018 33.0 18.8 144 184-331 224-394 (719)
295 3lp9_A LS-24; SEED albumin, pl 79.4 18 0.00061 30.9 10.7 64 309-380 129-201 (227)
296 3sov_A LRP-6, low-density lipo 78.6 37 0.0013 30.5 22.9 185 118-332 46-240 (318)
297 3vu4_A KMHSV2; beta-propeller 77.1 42 0.0014 30.3 23.0 183 118-331 70-272 (355)
298 4hw6_A Hypothetical protein, I 76.4 47 0.0016 31.4 13.8 104 216-333 153-262 (433)
299 2qe8_A Uncharacterized protein 76.4 43 0.0015 30.1 17.9 128 160-293 20-161 (343)
300 2mad_H Methylamine dehydrogena 76.0 48 0.0016 30.5 21.0 67 264-333 278-353 (373)
301 1hxn_A Hemopexin, HPX; heme, b 74.6 38 0.0013 28.6 13.9 136 214-380 27-197 (219)
302 3ba0_A Macrophage metalloelast 74.3 54 0.0019 30.2 16.9 142 162-335 186-355 (365)
303 1su3_A Interstitial collagenas 74.2 61 0.0021 30.8 16.9 144 210-380 267-432 (450)
304 3c7x_A Matrix metalloproteinas 74.1 37 0.0013 28.2 13.9 144 211-380 11-175 (196)
305 1qhu_A Protein (hemopexin); be 74.0 63 0.0022 30.8 19.1 137 215-379 158-330 (460)
306 2ece_A 462AA long hypothetical 73.4 65 0.0022 30.7 18.6 75 117-195 94-175 (462)
307 2p9w_A MAL S 1 allergenic prot 72.8 56 0.0019 29.7 20.4 232 118-366 24-303 (334)
308 3s94_A LRP-6, low-density lipo 72.3 81 0.0028 31.4 21.0 181 168-380 361-551 (619)
309 1jof_A Carboxy-CIS,CIS-muconat 71.7 39 0.0013 30.6 11.7 57 233-290 167-229 (365)
310 2oaj_A Protein SNI1; WD40 repe 70.7 90 0.0031 32.6 15.5 175 133-334 40-246 (902)
311 2xe4_A Oligopeptidase B; hydro 70.5 97 0.0033 31.5 25.8 141 232-380 294-458 (751)
312 3ei3_A DNA damage-binding prot 70.5 1.2E+02 0.0042 32.8 16.6 182 133-329 808-1000(1158)
313 3ba0_A Macrophage metalloelast 65.4 84 0.0029 28.9 16.8 145 211-380 186-350 (365)
314 2oaj_A Protein SNI1; WD40 repe 65.1 1.4E+02 0.0047 31.2 16.3 194 162-380 23-242 (902)
315 3sjl_D Methylamine dehydrogena 63.7 94 0.0032 28.8 20.0 116 118-245 44-172 (386)
316 1hxn_A Hemopexin, HPX; heme, b 62.9 69 0.0024 27.0 13.0 100 211-330 68-197 (219)
317 2be1_A Serine/threonine-protei 62.3 15 0.0005 33.7 6.5 69 263-335 9-81 (339)
318 2qe8_A Uncharacterized protein 61.9 89 0.003 27.9 18.1 124 118-248 27-161 (343)
319 2xe4_A Oligopeptidase B; hydro 60.1 1.5E+02 0.0052 30.1 19.7 183 183-378 200-398 (751)
320 2j04_A TAU60, YPL007P, hypothe 58.9 1.4E+02 0.0049 29.4 18.7 170 133-326 108-295 (588)
321 1gen_A Gelatinase A; hydrolase 58.2 83 0.0028 26.5 16.7 146 210-380 35-202 (218)
322 1z68_A Fibroblast activation p 55.3 1.7E+02 0.0058 29.1 19.0 139 234-379 225-392 (719)
323 3sre_A PON1, serum paraoxonase 53.0 1.4E+02 0.0046 27.3 12.4 140 183-330 82-252 (355)
324 1ck7_A Protein (gelatinase A); 52.3 1.7E+02 0.0059 29.1 12.6 64 308-380 547-615 (631)
325 3qhy_B Beta-lactamase inhibito 51.5 50 0.0017 29.0 8.1 54 258-317 152-205 (282)
326 1fwx_A Nitrous oxide reductase 51.0 71 0.0024 31.6 9.5 258 118-397 101-441 (595)
327 2oiz_A Aromatic amine dehydrog 50.2 34 0.0012 31.2 7.0 108 265-380 16-140 (361)
328 1gen_A Gelatinase A; hydrolase 50.1 1.1E+02 0.0039 25.6 17.8 101 215-332 87-204 (218)
329 1ck7_A Protein (gelatinase A); 46.6 2.3E+02 0.0079 28.2 14.0 101 215-332 500-617 (631)
330 3qhy_B Beta-lactamase inhibito 45.4 84 0.0029 27.5 8.5 19 207-225 72-90 (282)
331 1jof_A Carboxy-CIS,CIS-muconat 45.2 1.7E+02 0.0058 26.2 16.5 163 160-336 148-347 (365)
332 2cn3_A Xyloglucanase, beta-1,4 45.2 2.6E+02 0.0088 28.3 24.7 209 118-340 35-293 (737)
333 3kya_A Putative phosphatase; s 44.5 2.2E+02 0.0076 27.3 18.9 113 118-241 151-277 (496)
334 4hvt_A Ritya.17583.B, post-pro 43.6 2.7E+02 0.0093 28.1 15.5 149 184-339 269-438 (711)
335 3c75_H MADH, methylamine dehyd 41.5 48 0.0016 31.3 6.5 109 264-380 84-209 (426)
336 3qqz_A Putative uncharacterize 36.1 2.1E+02 0.0072 24.6 12.4 108 264-377 38-150 (255)
337 3amr_A 3-phytase; beta-propell 34.7 2.7E+02 0.0091 25.4 15.0 93 232-329 98-209 (355)
338 4a5s_A Dipeptidyl peptidase 4 34.4 3.7E+02 0.013 26.9 20.2 103 278-380 228-353 (740)
339 2oit_A Nucleoporin 214KDA; NH2 32.7 3E+02 0.01 25.5 16.5 60 169-243 163-224 (434)
340 4d9s_A UVB-resistance protein 31.0 3.1E+02 0.011 25.1 11.5 18 158-175 130-147 (406)
341 2j04_B YDR362CP, TAU91; beta p 30.2 3E+02 0.01 26.5 10.4 146 166-334 276-432 (524)
342 1mda_H Methylamine dehydrogena 28.8 75 0.0026 29.2 5.5 64 265-332 32-107 (368)
343 4hvt_A Ritya.17583.B, post-pro 27.5 4.9E+02 0.017 26.2 16.2 148 132-295 269-437 (711)
344 4gq1_A NUP37; propeller, trans 24.6 3.8E+02 0.013 24.0 18.2 57 309-371 327-383 (393)
345 2oit_A Nucleoporin 214KDA; NH2 23.9 4.3E+02 0.015 24.3 13.2 59 216-286 162-222 (434)
346 4a5s_A Dipeptidyl peptidase 4 20.5 6.4E+02 0.022 25.1 23.3 127 234-367 229-383 (740)
347 1fwx_A Nitrous oxide reductase 20.3 6.2E+02 0.021 24.9 14.8 72 166-243 100-185 (595)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.3e-43 Score=330.60 Aligned_cols=265 Identities=15% Similarity=0.260 Sum_probs=230.5
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
.+.||++||... .+++++||+.+++|..++++|.+ |..|++++.++ +||++||.+ ....+++++||+.+++|+
T Consensus 11 ~~~l~~~GG~~~-~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~-~lyv~GG~~--~~~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 11 HDYRIALFGGSQ-PQSCRYFNPKDYSWTDIRCPFEK---RRDAACVFWDN-VVYILGGSQ--LFPIKRMDCYNVVKDSWY 83 (306)
T ss_dssp CCEEEEEECCSS-TTSEEEEETTTTEEEECCCCSCC---CBSCEEEEETT-EEEEECCBS--SSBCCEEEEEETTTTEEE
T ss_pred cceEEEEeCCCC-CceEEEecCCCCCEecCCCCCcc---cceeEEEEECC-EEEEEeCCC--CCCcceEEEEeCCCCeEE
Confidence 578999998544 67899999999999999998875 88999999988 899999987 346789999999999999
Q ss_pred eCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCC-
Q 014222 198 RAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHR- 276 (428)
Q Consensus 198 ~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~- 276 (428)
.++++|.+|..|++++++++||++||.+.+ ....+++++||+.+++|+.++++|.+|..+++++++++||++||....
T Consensus 84 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 162 (306)
T 3ii7_A 84 SKLGPPTPRDSLAACAAEGKIYTSGGSEVG-NSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNN 162 (306)
T ss_dssp EEECCSSCCBSCEEEEETTEEEEECCBBTT-BSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCT
T ss_pred ECCCCCccccceeEEEECCEEEEECCCCCC-CcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCC
Confidence 999999999999999999999999998632 456789999999999999999999999999999999999999984322
Q ss_pred -----ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCC----cEEEEEeCCCCceeeCcccccccCCcc
Q 014222 277 -----QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDG----CKIRVYDEVTDSWSKHIDSKMHLGNSR 347 (428)
Q Consensus 277 -----~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~----~~i~~yd~~~~~W~~v~~~~~~~~~~~ 347 (428)
...+++||+.+++|+.+++++.++..+++++++++||++||.+. +++++||+++++|+.++.+|.+.
T Consensus 163 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---- 238 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKG---- 238 (306)
T ss_dssp TTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCB----
T ss_pred CcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCc----
Confidence 44589999999999999987776767778889999999999754 46999999999999998766432
Q ss_pred cccceEEEEeCCeEEEEeCCC---eEEEEEeecCCCCCCCccccccceeccCCccccch
Q 014222 348 ALEAAALVPLNGKLCIIRNNM---SISLVDVSKSNGERGASAEHLWETISGKGQFKTLV 403 (428)
Q Consensus 348 ~~~~~~~~~~~~~lyv~GG~~---~~~~v~~yd~~~~~~~~~~~~W~~~~~~~~~~~f~ 403 (428)
.+++++.++++|||+||.. ...++++||+.+ ++|+.++.||..+...
T Consensus 239 --~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~-------~~W~~~~~~~~~r~~~ 288 (306)
T 3ii7_A 239 --VTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTET-------DKWVANSKVRAFPVTS 288 (306)
T ss_dssp --SCCEEEEETTEEEEEECBCSSSBCCEEEEEETTT-------TEEEEEEEEECCSCTT
T ss_pred --cceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCC-------CeEEeCCCccccccee
Confidence 3578888899999999964 356899999999 9999999998775543
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.9e-43 Score=329.45 Aligned_cols=266 Identities=20% Similarity=0.327 Sum_probs=229.5
Q ss_pred cceEEEEeeCC-CCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeC---CCCCCCceEEEEECCC
Q 014222 118 EEWIYVIKRDR-EGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKD---PLKGSMRRVIFYSART 193 (428)
Q Consensus 118 ~~~l~v~gg~~-~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~---~~~~~~~~v~~yd~~t 193 (428)
++.||++||.. ...+++++||+.+++|..++++|.+ |..|++++.++ +||++||.. ......+++++||+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVP---RSGLAGCVVGG-LLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSC---CBSCEEEEETT-EEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcc---cccceEEEECC-EEEEECCCcCCCCCCeecceEEEECCCC
Confidence 78999999852 3346899999999999999988876 88899988887 899999983 2223568899999999
Q ss_pred CceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecC
Q 014222 194 NKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLG 273 (428)
Q Consensus 194 ~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~ 273 (428)
++|+.+++||.+|..+++++++++||++||... ....+++++||+.+++|+.++++|.+|..+++++++++||++||.
T Consensus 100 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 177 (308)
T 1zgk_A 100 NQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHG--CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGF 177 (308)
T ss_dssp TEEEECCCCSSCCBTCEEEEETTEEEEECCEET--TEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CeEeECCCCCcCccccEEEEECCEEEEEcCCCC--CcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCC
Confidence 999999999999999999999999999999863 345688999999999999999999999999999999999999985
Q ss_pred CCC--ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCC----cEEEEEeCCCCceeeCcccccccCCcc
Q 014222 274 SHR--QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDG----CKIRVYDEVTDSWSKHIDSKMHLGNSR 347 (428)
Q Consensus 274 ~~~--~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~----~~i~~yd~~~~~W~~v~~~~~~~~~~~ 347 (428)
... ...+++||+.+++|+.+++++.++..+++++++++||++||.++ +++++||+++++|+.+..+|.+.
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r---- 253 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR---- 253 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC----
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc----
Confidence 433 34589999999999999887777777778889999999999764 57999999999999998765432
Q ss_pred cccceEEEEeCCeEEEEeCCC---eEEEEEeecCCCCCCCccccccceeccCCccccc
Q 014222 348 ALEAAALVPLNGKLCIIRNNM---SISLVDVSKSNGERGASAEHLWETISGKGQFKTL 402 (428)
Q Consensus 348 ~~~~~~~~~~~~~lyv~GG~~---~~~~v~~yd~~~~~~~~~~~~W~~~~~~~~~~~f 402 (428)
..++++..+++|||+||.. ...++++||+++ ++|+.++.||..+..
T Consensus 254 --~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~-------~~W~~~~~~p~~r~~ 302 (308)
T 1zgk_A 254 --SALGITVHQGRIYVLGGYDGHTFLDSVECYDPDT-------DTWSEVTRMTSGRSG 302 (308)
T ss_dssp --BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTT-------TEEEEEEECSSCCBS
T ss_pred --cceEEEEECCEEEEEcCcCCCcccceEEEEcCCC-------CEEeecCCCCCCccc
Confidence 3578888999999999964 356899999999 999999999987544
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.9e-43 Score=326.76 Aligned_cols=265 Identities=23% Similarity=0.377 Sum_probs=227.9
Q ss_pred cceEEEEeeCCC-CceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCce
Q 014222 118 EEWIYVIKRDRE-GKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKW 196 (428)
Q Consensus 118 ~~~l~v~gg~~~-~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 196 (428)
++.||++||... ...++++||+.+++|..++++|.+ |..|++++.++ +||++||.++.. ..+++++||+.+++|
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~-~lyv~GG~~~~~-~~~~~~~~d~~~~~W 89 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSR---RCRAGMVYMAG-LVFAVGGFNGSL-RVRTVDSYDPVKDQW 89 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSC---CBSCEEEEETT-EEEEESCBCSSS-BCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcc---cccceEEEECC-EEEEEeCcCCCc-cccceEEECCCCCce
Confidence 678999998543 335799999999999999988875 88899988887 899999987543 578999999999999
Q ss_pred eeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCC
Q 014222 197 HRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHR 276 (428)
Q Consensus 197 ~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~ 276 (428)
+.+++||.+|..|++++++++||++||.+. ....+++++||+.+++|+.++++|.+|..+++++++++||++||....
T Consensus 90 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 167 (302)
T 2xn4_A 90 TSVANMRDRRSTLGAAVLNGLLYAVGGFDG--STGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVA 167 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEEEEECS--SCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT
T ss_pred eeCCCCCccccceEEEEECCEEEEEcCCCC--CccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCC
Confidence 999999999999999999999999999863 344678999999999999999999999999999999999999985432
Q ss_pred ----ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCC----cEEEEEeCCCCceeeCcccccccCCccc
Q 014222 277 ----QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDG----CKIRVYDEVTDSWSKHIDSKMHLGNSRA 348 (428)
Q Consensus 277 ----~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~----~~i~~yd~~~~~W~~v~~~~~~~~~~~~ 348 (428)
...+++||+.+++|+.+++++..+..+++++++++||++||.++ +++++||+++++|+.++.++...
T Consensus 168 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r----- 242 (302)
T 2xn4_A 168 SRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR----- 242 (302)
T ss_dssp TTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC-----
T ss_pred CCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc-----
Confidence 34589999999999999887766666778899999999999764 47999999999999998765432
Q ss_pred ccceEEEEeCCeEEEEeCCCe---EEEEEeecCCCCCCCccccccceec-cCCccccc
Q 014222 349 LEAAALVPLNGKLCIIRNNMS---ISLVDVSKSNGERGASAEHLWETIS-GKGQFKTL 402 (428)
Q Consensus 349 ~~~~~~~~~~~~lyv~GG~~~---~~~v~~yd~~~~~~~~~~~~W~~~~-~~~~~~~f 402 (428)
..++++..+++|||+||... ..++++||+++ ++|+.++ .|+..+..
T Consensus 243 -~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~-------~~W~~~~~~~~~~r~~ 292 (302)
T 2xn4_A 243 -RNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTT-------DKWTVVSSCMSTGRSY 292 (302)
T ss_dssp -BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTT-------TEEEECSSCCSSCCBS
T ss_pred -ccCeEEEECCEEEEECCcCCCcccccEEEEcCCC-------CeEEECCcccCccccc
Confidence 35778889999999999643 46799999999 9999997 78776443
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=7.7e-42 Score=319.45 Aligned_cols=265 Identities=26% Similarity=0.379 Sum_probs=229.2
Q ss_pred ccceEEEEee-CCCC--ceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCC
Q 014222 117 AEEWIYVIKR-DREG--KISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSART 193 (428)
Q Consensus 117 ~~~~l~v~gg-~~~~--~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t 193 (428)
.++.||++|| .... .+++++||+.+++|..++++|.+ |..|++++.++ +||++||.++. ...+++++||+.+
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~-~l~v~GG~~~~-~~~~~~~~~d~~~ 87 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRK---RRYVASVSLHD-RIYVIGGYDGR-SRLSSVECLDYTA 87 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSC---CBSCEEEEETT-EEEEECCBCSS-CBCCCEEEEETTC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChh---hccccEEEECC-EEEEEcCCCCC-ccCceEEEEECCC
Confidence 4788999998 4422 35799999999999999988875 88899998888 89999998743 3678999999999
Q ss_pred Cc---eeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEE
Q 014222 194 NK---WHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLK 270 (428)
Q Consensus 194 ~~---W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~ 270 (428)
++ |+.++++|.+|..|++++++++||++||... ....+++++||+.+++|+.++++|.+|..+++++++++||++
T Consensus 88 ~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~--~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 165 (301)
T 2vpj_A 88 DEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDG--SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCL 165 (301)
T ss_dssp CTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCS--SCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEE
T ss_pred CCCCeeEECCCCCCCccceeEEEECCEEEEEcccCC--CcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEE
Confidence 99 9999999999999999999999999999863 345789999999999999999999999999999999999999
Q ss_pred ecCCCC--ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCC----cEEEEEeCCCCceeeCcccccccC
Q 014222 271 GLGSHR--QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDG----CKIRVYDEVTDSWSKHIDSKMHLG 344 (428)
Q Consensus 271 Gg~~~~--~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~----~~i~~yd~~~~~W~~v~~~~~~~~ 344 (428)
||.... ...+++||+.+++|+.+++++.++..+++++++++||++||.++ +++++||+++++|+.++.+|.+.
T Consensus 166 GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r- 244 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR- 244 (301)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCC-
T ss_pred CCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcc-
Confidence 986433 34589999999999999887776767778889999999999764 57999999999999998765432
Q ss_pred CcccccceEEEEeCCeEEEEeCCCe---EEEEEeecCCCCCCCccccccceeccCCcccc
Q 014222 345 NSRALEAAALVPLNGKLCIIRNNMS---ISLVDVSKSNGERGASAEHLWETISGKGQFKT 401 (428)
Q Consensus 345 ~~~~~~~~~~~~~~~~lyv~GG~~~---~~~v~~yd~~~~~~~~~~~~W~~~~~~~~~~~ 401 (428)
..++++.++++||++||... ...+++||+++ ++|+.++.||..+.
T Consensus 245 -----~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~-------~~W~~~~~~~~~r~ 292 (301)
T 2vpj_A 245 -----CYVGATVLRGRLYAIAGYDGNSLLSSIECYDPII-------DSWEVVTSMGTQRC 292 (301)
T ss_dssp -----BSCEEEEETTEEEEECCBCSSSBEEEEEEEETTT-------TEEEEEEEEEEEEE
T ss_pred -----cceeEEEECCEEEEEcCcCCCcccccEEEEcCCC-------CeEEEcCCCCcccc
Confidence 35778888999999999643 57899999999 99999999987644
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=319.31 Aligned_cols=261 Identities=15% Similarity=0.191 Sum_probs=218.6
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeC----CC-CCCCceEEEEECC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKD----PL-KGSMRRVIFYSAR 192 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~----~~-~~~~~~v~~yd~~ 192 (428)
++.||++|| .++++|||.+++|.. ++++.+. +|..|++++.++ +||++||.. .. ....+++++||+.
T Consensus 4 ~~~l~~~GG-----~~~~~yd~~~~~W~~-~~~~~p~-~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~ 75 (315)
T 4asc_A 4 QDLIFMISE-----EGAVAYDPAANECYC-ASLSSQV-PKNHVSLVTKEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHL 75 (315)
T ss_dssp EEEEEEEET-----TEEEEEETTTTEEEE-EECCCCS-CSSEEEEECTTC-CEEEEEEEEECSSCSSSCEEEEEEEEETT
T ss_pred ceEEEEEcC-----CceEEECCCCCeEec-CCCCCCC-CccceEEEEECC-EEEEEcCcccCCCCCccccccceEEecCC
Confidence 467899987 479999999999987 6665422 478888888877 899999962 11 1134569999999
Q ss_pred CCceeeCCCCCcCCcceeeEEECCEEEEEccccC-CCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEe
Q 014222 193 TNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENG-GVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKG 271 (428)
Q Consensus 193 t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~G 271 (428)
+++|+.++++|.+|..|++++++++||++||.+. ......+++++||+.+++|+.++++|.+|..+++++++++||++|
T Consensus 76 ~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 155 (315)
T 4asc_A 76 DSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIG 155 (315)
T ss_dssp TTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEC
T ss_pred CCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEe
Confidence 9999999999999999999999999999999752 114567899999999999999999999999999999999999999
Q ss_pred cCC-CC--ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCC----cEEEEEeCCCCceeeCcccccccC
Q 014222 272 LGS-HR--QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDG----CKIRVYDEVTDSWSKHIDSKMHLG 344 (428)
Q Consensus 272 g~~-~~--~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~----~~i~~yd~~~~~W~~v~~~~~~~~ 344 (428)
|.. .. ...+++||+.+++|+.+++++.++..+++++++++||++||.++ +++++||+++++|+.++.+|.++
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r- 234 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQER- 234 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCC-
T ss_pred CCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcc-
Confidence 862 22 34589999999999999987777777778899999999999765 37999999999999998765432
Q ss_pred CcccccceEEEEeCCeEEEEeCCC------------eEEEEEeecCCCCCCCccccccceeccCCcc
Q 014222 345 NSRALEAAALVPLNGKLCIIRNNM------------SISLVDVSKSNGERGASAEHLWETISGKGQF 399 (428)
Q Consensus 345 ~~~~~~~~~~~~~~~~lyv~GG~~------------~~~~v~~yd~~~~~~~~~~~~W~~~~~~~~~ 399 (428)
.+++++.++++|||+||.. ...++++||+++ ++|+.+...|+.
T Consensus 235 -----~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~-------~~W~~~~~~~r~ 289 (315)
T 4asc_A 235 -----SSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEE-------KKWEGVLREIAY 289 (315)
T ss_dssp -----BSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT-------TEEEEEESCSSC
T ss_pred -----cceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCC-------ChhhhhccCCcC
Confidence 3578888999999999963 356899999999 999999666654
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=5.8e-41 Score=316.07 Aligned_cols=260 Identities=15% Similarity=0.224 Sum_probs=215.1
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCC-----CCCCceEEEEECC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPL-----KGSMRRVIFYSAR 192 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~-----~~~~~~v~~yd~~ 192 (428)
++.||++||. .+++|||.+++|.. ++++.+ .+|..|++++.++ +||++||.... ....+++++||+.
T Consensus 15 ~~~i~~~GG~-----~~~~yd~~~~~W~~-~~~~~~-~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~~~~d~~ 86 (318)
T 2woz_A 15 KDLILLVNDT-----AAVAYDPMENECYL-TALAEQ-IPRNHSSIVTQQN-QVYVVGGLYVDEENKDQPLQSYFFQLDNV 86 (318)
T ss_dssp EEEEEEECSS-----EEEEEETTTTEEEE-EEECTT-SCSSEEEEECSSS-CEEEEESSCC-------CCCBEEEEEETT
T ss_pred cchhhhcccc-----ceEEECCCCCceec-ccCCcc-CCccceEEEEECC-EEEEECCcccCccccCCCccccEEEEeCC
Confidence 6789999973 48999999999998 444432 2377888888877 89999995311 1123469999999
Q ss_pred CCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEec
Q 014222 193 TNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGL 272 (428)
Q Consensus 193 t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg 272 (428)
+++|+.+++||.+|..|++++++++||++||.........+++++||+.+++|+.++++|.+|..+++++++++||++||
T Consensus 87 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 166 (318)
T 2woz_A 87 SSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGG 166 (318)
T ss_dssp TTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECC
T ss_pred CCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcC
Confidence 99999999999999999999999999999998632245567899999999999999999999999999999999999998
Q ss_pred CCC---CceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCC----cEEEEEeCCCCceeeCcccccccCC
Q 014222 273 GSH---RQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDG----CKIRVYDEVTDSWSKHIDSKMHLGN 345 (428)
Q Consensus 273 ~~~---~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~----~~i~~yd~~~~~W~~v~~~~~~~~~ 345 (428)
... ....+++||+.+++|+.+++++.++..+++++++++||++||.+. +.+++||+++++|+.++.+|.+.
T Consensus 167 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-- 244 (318)
T 2woz_A 167 KTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQER-- 244 (318)
T ss_dssp EESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCC--
T ss_pred CCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcc--
Confidence 532 234589999999999999887777767778899999999999754 46999999999999998766432
Q ss_pred cccccceEEEEeCCeEEEEeCCCe------------EEEEEeecCCCCCCCccccccceeccCCccc
Q 014222 346 SRALEAAALVPLNGKLCIIRNNMS------------ISLVDVSKSNGERGASAEHLWETISGKGQFK 400 (428)
Q Consensus 346 ~~~~~~~~~~~~~~~lyv~GG~~~------------~~~v~~yd~~~~~~~~~~~~W~~~~~~~~~~ 400 (428)
.+++++..+++||++||... ..++++||+++ ++|+.+ ++..+
T Consensus 245 ----~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~-------~~W~~~--~~~~r 298 (318)
T 2woz_A 245 ----SSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK-------KEWAGM--LKEIR 298 (318)
T ss_dssp ----BSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT-------TEEEEE--ESCCG
T ss_pred ----cceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC-------CEehhh--ccccc
Confidence 35788899999999999642 46799999999 999998 44443
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=9.1e-39 Score=298.79 Aligned_cols=261 Identities=23% Similarity=0.390 Sum_probs=215.2
Q ss_pred ccchhhhchHhHHhhhcCChhHHHHHhhCcc--cceEEEEeeCCC--CceeEEEEeCCCCceEeCCCCCCCCccccccEE
Q 014222 87 EHCKLRLVCKRWHRLLSGNFYYSLRKSLGIA--EEWIYVIKRDRE--GKISWHAFDPIYQLWQPLPPIPKEYSEALGFGC 162 (428)
Q Consensus 87 ~l~~~~~v~k~W~~l~~~~~f~~~r~~~~~~--~~~l~v~gg~~~--~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~ 162 (428)
++..+....++|..+...|. .|..++.+ ++.||++||... ..+++++||+.+++|+.++++|.+ |..|++
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~ 104 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPS---RRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR---RSTLGA 104 (302)
T ss_dssp CEEEEETTTTEEEEECCCSS---CCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC---CBSCEE
T ss_pred cEEEEcCcCCcEeEcccCCc---ccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc---ccceEE
Confidence 45567777889998876664 44333332 889999998543 235799999999999999998876 889999
Q ss_pred EEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCC
Q 014222 163 AVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNK 242 (428)
Q Consensus 163 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t 242 (428)
++.++ +||++||.++.. ..+++++||+.+++|+.++++|.+|..+++++++++||++||.+.......+++++||+.+
T Consensus 105 ~~~~~-~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 105 AVLNG-LLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp EEETT-EEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred EEECC-EEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 99988 999999987543 5789999999999999999999999999999999999999998643223468899999999
Q ss_pred CceEEcCCCCCCccceEEEEECCEEEEEecCCCC--ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCC
Q 014222 243 NRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHR--QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDG 320 (428)
Q Consensus 243 ~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~--~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~ 320 (428)
++|+.++++|.+|..+++++++++||++||.... ...+++||+++++|+.++.++..+..+++++++++||++||.++
T Consensus 183 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~ 262 (302)
T 2xn4_A 183 NEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDG 262 (302)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred CcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCC
Confidence 9999999999999999999999999999986433 34589999999999999987766666778889999999999764
Q ss_pred ----cEEEEEeCCCCceeeCc-ccccccCCcccccceEEEEeCCeE
Q 014222 321 ----CKIRVYDEVTDSWSKHI-DSKMHLGNSRALEAAALVPLNGKL 361 (428)
Q Consensus 321 ----~~i~~yd~~~~~W~~v~-~~~~~~~~~~~~~~~~~~~~~~~l 361 (428)
+++++||+++++|+.++ .++.++ ..++++.++++|
T Consensus 263 ~~~~~~v~~yd~~~~~W~~~~~~~~~~r------~~~~~~~~~~~i 302 (302)
T 2xn4_A 263 SCNLASVEYYNPTTDKWTVVSSCMSTGR------SYAGVTVIDKRL 302 (302)
T ss_dssp SSBCCCEEEEETTTTEEEECSSCCSSCC------BSCEEEEEEC--
T ss_pred CcccccEEEEcCCCCeEEECCcccCccc------ccceEEEecccC
Confidence 46999999999999997 444332 357777777765
No 8
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=301.99 Aligned_cols=265 Identities=20% Similarity=0.271 Sum_probs=215.6
Q ss_pred ccchhhhchHhHHhhhcCChhHHHHHhhCc--ccceEEEEeeC-----CC-C--ceeEEEEeCCCCceEeCCCCCCCCcc
Q 014222 87 EHCKLRLVCKRWHRLLSGNFYYSLRKSLGI--AEEWIYVIKRD-----RE-G--KISWHAFDPIYQLWQPLPPIPKEYSE 156 (428)
Q Consensus 87 ~l~~~~~v~k~W~~l~~~~~f~~~r~~~~~--~~~~l~v~gg~-----~~-~--~~~~~~yd~~~~~W~~l~~~~~~~~~ 156 (428)
.+..+....++|.. ...|. ..+|..++. .++.||++||. .. . .+.+++||+.+++|+.++++|.+
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--- 88 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSS-QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSP--- 88 (315)
T ss_dssp EEEEEETTTTEEEE-EECCC-CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSC---
T ss_pred ceEEECCCCCeEec-CCCCC-CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcc---
Confidence 44567777888975 44332 113433332 38899999983 11 1 23599999999999999998875
Q ss_pred ccccEEEEEeCCEEEEEeeeCC--CCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCe
Q 014222 157 ALGFGCAVLSGCHLYLFGGKDP--LKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRS 234 (428)
Q Consensus 157 r~~~~~~~~~~~~lyv~GG~~~--~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 234 (428)
|..|++++.++ +||++||.+. .....+++++||+.+++|+.++++|.+|..|++++++++||++||.... ....++
T Consensus 89 r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~ 166 (315)
T 4asc_A 89 RCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSD-RKCLNK 166 (315)
T ss_dssp EESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTT-SCBCCC
T ss_pred hhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCC-Ccccce
Confidence 88999999988 9999999752 2346789999999999999999999999999999999999999998432 456789
Q ss_pred EEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCC--ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeE
Q 014222 235 AEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHR--QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHL 312 (428)
Q Consensus 235 v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~--~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l 312 (428)
+++||+.+++|+.++++|.+|..+++++++++||++||.... ...+++||+++++|+.+++++.++..+++++++++|
T Consensus 167 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l 246 (315)
T 4asc_A 167 MCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTL 246 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred EEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECCEE
Confidence 999999999999999999999999999999999999986443 335899999999999999877777777788999999
Q ss_pred EEEEccCC-------------cEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeC
Q 014222 313 YALDCKDG-------------CKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRN 366 (428)
Q Consensus 313 yv~gG~~~-------------~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG 366 (428)
|++||.++ +++++||+++++|+.+... + + .+++++.++++||++..
T Consensus 247 ~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~--~--r----~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 247 YAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLRE--I--A----YAAGATFLPVRLNVLRL 305 (315)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESC--S--S----CCSSCEEEEEEECGGGS
T ss_pred EEECCccccCcCCccccccccCcEEEecCCCChhhhhccC--C--c----CccceEEeCCEEEEEEe
Confidence 99999742 4699999999999998322 2 2 24777889999999854
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2e-38 Score=303.62 Aligned_cols=263 Identities=16% Similarity=0.157 Sum_probs=205.3
Q ss_pred cceEEEEeeCCCCceeEEEEeCC--CCceEeCCCCC-CCCccccccEEEEEeCCEEEEEeee-C---CCCCCCceEEEEE
Q 014222 118 EEWIYVIKRDREGKISWHAFDPI--YQLWQPLPPIP-KEYSEALGFGCAVLSGCHLYLFGGK-D---PLKGSMRRVIFYS 190 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~--~~~W~~l~~~~-~~~~~r~~~~~~~~~~~~lyv~GG~-~---~~~~~~~~v~~yd 190 (428)
++.||++||... +++++||+. +++|..++++| .+ |..|+++++++ +||++||. + ......+++++||
T Consensus 19 ~~~iyv~GG~~~--~~~~~~d~~~~~~~W~~~~~~p~~~---R~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~v~~yd 92 (357)
T 2uvk_A 19 NDTVYIGLGSAG--TAWYKLDTQAKDKKWTALAAFPGGP---RDQATSAFIDG-NLYVFGGIGKNSEGLTQVFNDVHKYN 92 (357)
T ss_dssp TTEEEEECGGGT--TCEEEEETTSSSCCEEECCCCTTCC---CBSCEEEEETT-EEEEECCEEECTTSCEEECCCEEEEE
T ss_pred CCEEEEEeCcCC--CeEEEEccccCCCCeeECCCCCCCc---CccceEEEECC-EEEEEcCCCCCCCccceeeccEEEEe
Confidence 899999998543 379999998 49999999988 54 88999999988 89999998 3 1223578999999
Q ss_pred CCCCceeeCCCCC-cCCcceeeEEECCEEEEEccccCCC--------------------------------CCCCCeEEE
Q 014222 191 ARTNKWHRAPDML-RRRHFFGSCVINNCLYVAGGENGGV--------------------------------HRSLRSAEV 237 (428)
Q Consensus 191 ~~t~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~~~~~--------------------------------~~~~~~v~~ 237 (428)
+.+++|+.+++|+ .+|..|++++++++||++||.+... ...++++++
T Consensus 93 ~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (357)
T 2uvk_A 93 PKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLS 172 (357)
T ss_dssp TTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEE
T ss_pred CCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEE
Confidence 9999999999998 9999999999999999999975210 024579999
Q ss_pred EeCCCCceEEcCCCCCCccc-eEEEEECCEEEEEecCCCC---ceeEEEEeC--CCCCeEecCCCCcCCC--CCceEEEC
Q 014222 238 YDPNKNRWSFISDMSTAMVP-FIGVVYEGKWFLKGLGSHR---QVLSEAYQP--ETDSWFPVYDGMVAGW--RNPSASLN 309 (428)
Q Consensus 238 yd~~t~~W~~~~~~p~~~~~-~~~~~~~g~lyv~Gg~~~~---~~~i~~yd~--~~~~W~~~~~~~~~~~--~~~~~~~~ 309 (428)
||+.+++|+.++++|.++.. +++++++++||++||.... ...+++||+ .+++|+.++.++.++. .+++++++
T Consensus 173 yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~ 252 (357)
T 2uvk_A 173 FDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISN 252 (357)
T ss_dssp EETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEET
T ss_pred EeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEEC
Confidence 99999999999999976554 8999999999999985322 234788876 9999999987544432 34477899
Q ss_pred CeEEEEEccCC---------------------cEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCC
Q 014222 310 RHLYALDCKDG---------------------CKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNM 368 (428)
Q Consensus 310 ~~lyv~gG~~~---------------------~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~ 368 (428)
++||++||.+. .++++||+++++|++++.+|.++ ..++++..+++|||+||..
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r------~~~~~~~~~~~i~v~GG~~ 326 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR------AYGVSLPWNNSLLIIGGET 326 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCC------BSSEEEEETTEEEEEEEEC
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCc------ccceeEEeCCEEEEEeeeC
Confidence 99999999531 36899999999999998766442 3477788999999999954
Q ss_pred e----EEEEEeecCCCCCCCccccccceeccCCcc
Q 014222 369 S----ISLVDVSKSNGERGASAEHLWETISGKGQF 399 (428)
Q Consensus 369 ~----~~~v~~yd~~~~~~~~~~~~W~~~~~~~~~ 399 (428)
. .++++.++.++ ++|.+....|+.
T Consensus 327 ~~~~~~~~v~~l~~~~-------~~~~~~~~~~~~ 354 (357)
T 2uvk_A 327 AGGKAVTDSVLITVKD-------NKVTVQNLEHHH 354 (357)
T ss_dssp GGGCEEEEEEEEEC-C-------CSCEEEC-----
T ss_pred CCCCEeeeEEEEEEcC-------cEeEeeeccccc
Confidence 2 57899999999 999998887765
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=294.43 Aligned_cols=250 Identities=22% Similarity=0.306 Sum_probs=211.0
Q ss_pred CccchhhhchHhHHhhhcCChhHHHHHhhCcc--cceEEEEeeCC-CCceeEEEEeCCCCceEeCCCCCCCCccccccEE
Q 014222 86 VEHCKLRLVCKRWHRLLSGNFYYSLRKSLGIA--EEWIYVIKRDR-EGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGC 162 (428)
Q Consensus 86 ~~l~~~~~v~k~W~~l~~~~~f~~~r~~~~~~--~~~l~v~gg~~-~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~ 162 (428)
.++..+....++|..+...|. .|..++.+ ++.||++||.. ...+++++||+.+++|..++++|.+ |..|++
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~ 97 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFE---KRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP---RDSLAA 97 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSC---CCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC---CBSCEE
T ss_pred ceEEEecCCCCCEecCCCCCc---ccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc---ccceeE
Confidence 345667888899999877764 44444333 88999999865 2336899999999999999998875 889999
Q ss_pred EEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCC--CCCCeEEEEeC
Q 014222 163 AVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVH--RSLRSAEVYDP 240 (428)
Q Consensus 163 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~--~~~~~v~~yd~ 240 (428)
++.++ +||++||.+......+++++||+.+++|+.++++|.+|..|++++++++||++||...... ...+++++||+
T Consensus 98 ~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 98 CAAEG-KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp EEETT-EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred EEECC-EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCC
Confidence 99988 9999999874444788999999999999999999999999999999999999999863211 12789999999
Q ss_pred CCCceEEcCCCCCCccceEEEEECCEEEEEecCCCC--ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEcc
Q 014222 241 NKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHR--QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCK 318 (428)
Q Consensus 241 ~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~--~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~ 318 (428)
.+++|+.++++|.+|..+++++++++||++||.... ...+++||+.+++|+.+++++..+..+++++++++||++||.
T Consensus 177 ~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 256 (306)
T 3ii7_A 177 ATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGF 256 (306)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECB
T ss_pred CCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCc
Confidence 999999999999999999999999999999985433 345899999999999998877666667788899999999997
Q ss_pred CC----cEEEEEeCCCCceeeCcccccc
Q 014222 319 DG----CKIRVYDEVTDSWSKHIDSKMH 342 (428)
Q Consensus 319 ~~----~~i~~yd~~~~~W~~v~~~~~~ 342 (428)
++ +++++||+++++|+.++.++.+
T Consensus 257 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~ 284 (306)
T 3ii7_A 257 QGVGRLGHILEYNTETDKWVANSKVRAF 284 (306)
T ss_dssp CSSSBCCEEEEEETTTTEEEEEEEEECC
T ss_pred CCCeeeeeEEEEcCCCCeEEeCCCcccc
Confidence 54 5799999999999999877643
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.1e-37 Score=292.31 Aligned_cols=248 Identities=25% Similarity=0.372 Sum_probs=210.3
Q ss_pred CCccchhhhchHhHHhhhcCChhHHHHHhhCcc--cceEEEEeeC----CC--CceeEEEEeCCCCceEeCCCCCCCCcc
Q 014222 85 RVEHCKLRLVCKRWHRLLSGNFYYSLRKSLGIA--EEWIYVIKRD----RE--GKISWHAFDPIYQLWQPLPPIPKEYSE 156 (428)
Q Consensus 85 ~~~l~~~~~v~k~W~~l~~~~~f~~~r~~~~~~--~~~l~v~gg~----~~--~~~~~~~yd~~~~~W~~l~~~~~~~~~ 156 (428)
..++..+....++|..+...|. .|..++.+ ++.||++||. .. ..+++++||+.+++|..+++++.+
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--- 111 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQV---PRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP--- 111 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSS---CCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC---
T ss_pred cceEEEEcCCCCeEeECCCCCc---ccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC---
Confidence 3456678888999999976664 44433332 8999999985 21 125799999999999999998875
Q ss_pred ccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEE
Q 014222 157 ALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAE 236 (428)
Q Consensus 157 r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~ 236 (428)
|..|++++.++ +||++||.+... ..+++++||+.+++|+.++++|.+|..+++++++++||++||.+. ....++++
T Consensus 112 r~~~~~~~~~~-~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~ 187 (308)
T 1zgk_A 112 RNRIGVGVIDG-HIYAVGGSHGCI-HHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDG--TNRLNSAE 187 (308)
T ss_dssp CBTCEEEEETT-EEEEECCEETTE-ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS--SCBCCCEE
T ss_pred ccccEEEEECC-EEEEEcCCCCCc-ccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCC--CCcCceEE
Confidence 88999999988 999999987542 578899999999999999999999999999999999999999863 33478999
Q ss_pred EEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCC--ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEE
Q 014222 237 VYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHR--QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYA 314 (428)
Q Consensus 237 ~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~--~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv 314 (428)
+||+.+++|+.++++|.+|..+++++++++||++||.... ...+++||+++++|+.+++++.++..+++++++++||+
T Consensus 188 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v 267 (308)
T 1zgk_A 188 CYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYV 267 (308)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred EEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEE
Confidence 9999999999999999999999999999999999986433 34589999999999999987766667778889999999
Q ss_pred EEccCC----cEEEEEeCCCCceeeCcccccc
Q 014222 315 LDCKDG----CKIRVYDEVTDSWSKHIDSKMH 342 (428)
Q Consensus 315 ~gG~~~----~~i~~yd~~~~~W~~v~~~~~~ 342 (428)
+||.++ +++++||+++++|+.++.+|.+
T Consensus 268 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 299 (308)
T 1zgk_A 268 LGGYDGHTFLDSVECYDPDTDTWSEVTRMTSG 299 (308)
T ss_dssp ECCBCSSCBCCEEEEEETTTTEEEEEEECSSC
T ss_pred EcCcCCCcccceEEEEcCCCCEEeecCCCCCC
Confidence 999754 5799999999999999877644
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=5.7e-38 Score=295.61 Aligned_cols=263 Identities=20% Similarity=0.288 Sum_probs=212.8
Q ss_pred cchhhhchHhHHhhhcCChhHHHHHhhC--cccceEEEEeeCC---CC-----ceeEEEEeCCCCceEeCCCCCCCCccc
Q 014222 88 HCKLRLVCKRWHRLLSGNFYYSLRKSLG--IAEEWIYVIKRDR---EG-----KISWHAFDPIYQLWQPLPPIPKEYSEA 157 (428)
Q Consensus 88 l~~~~~v~k~W~~l~~~~~f~~~r~~~~--~~~~~l~v~gg~~---~~-----~~~~~~yd~~~~~W~~l~~~~~~~~~r 157 (428)
...+....++|... ..+. ..+|..++ ..++.||++||.. .. ...+++||+.+++|..++++|.+ |
T Consensus 26 ~~~yd~~~~~W~~~-~~~~-~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r 100 (318)
T 2woz_A 26 AVAYDPMENECYLT-ALAE-QIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA---R 100 (318)
T ss_dssp EEEEETTTTEEEEE-EECT-TSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC---B
T ss_pred eEEECCCCCceecc-cCCc-cCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc---c
Confidence 34577788889773 2221 11233332 2388999999832 11 13489999999999999998886 8
Q ss_pred cccEEEEEeCCEEEEEeeeCC-CCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEE
Q 014222 158 LGFGCAVLSGCHLYLFGGKDP-LKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAE 236 (428)
Q Consensus 158 ~~~~~~~~~~~~lyv~GG~~~-~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~ 236 (428)
..|++++.++ +||++||... .....+++++||+.+++|+.++++|.+|..|++++++++||++||.... ....++++
T Consensus 101 ~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~ 178 (318)
T 2woz_A 101 CLFGLGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDD-KKCTNRVF 178 (318)
T ss_dssp CSCEEEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESS-SCBCCCEE
T ss_pred cccceEEECC-EEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCC-CCccceEE
Confidence 8999999988 9999999863 2335789999999999999999999999999999999999999998533 44578999
Q ss_pred EEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCC--ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEE
Q 014222 237 VYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHR--QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYA 314 (428)
Q Consensus 237 ~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~--~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv 314 (428)
+||+.+++|+.++++|.+|..+++++++++||++||.... ...+++||+++++|+.+++++.++..+++++++++||+
T Consensus 179 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v 258 (318)
T 2woz_A 179 IYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYA 258 (318)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred EEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEE
Confidence 9999999999999999999999999999999999985433 24589999999999999987776666778899999999
Q ss_pred EEccCC-------------cEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEe
Q 014222 315 LDCKDG-------------CKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIR 365 (428)
Q Consensus 315 ~gG~~~-------------~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~G 365 (428)
+||.+. +++++||+++++|+++ ++.. | ..++++.++++|||+.
T Consensus 259 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~----r--~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 259 IGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEI----R--YASGASCLATRLNLFK 314 (318)
T ss_dssp ECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCC----G--GGTTCEEEEEEEEGGG
T ss_pred ECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccc----c--ccccceeeCCEEEEEE
Confidence 999753 4799999999999998 3222 1 3577788899999874
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=287.47 Aligned_cols=249 Identities=24% Similarity=0.310 Sum_probs=211.5
Q ss_pred CCccchhhhchHhHHhhhcCChhHHHHHhhCcc--cceEEEEeeCCC--CceeEEEEeCCCCc---eEeCCCCCCCCccc
Q 014222 85 RVEHCKLRLVCKRWHRLLSGNFYYSLRKSLGIA--EEWIYVIKRDRE--GKISWHAFDPIYQL---WQPLPPIPKEYSEA 157 (428)
Q Consensus 85 ~~~l~~~~~v~k~W~~l~~~~~f~~~r~~~~~~--~~~l~v~gg~~~--~~~~~~~yd~~~~~---W~~l~~~~~~~~~r 157 (428)
..++..+....++|..+...|. .|..++.. ++.||++||... ..+++++||+.+++ |+.++++|.+ |
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~---r 103 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITR---KRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR---R 103 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSS---CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC---C
T ss_pred eeEEEEEcCCCCeEEeCCCCCh---hhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC---c
Confidence 3455667888899999887664 34333333 889999998542 23579999999999 9999998875 8
Q ss_pred cccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEE
Q 014222 158 LGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEV 237 (428)
Q Consensus 158 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~ 237 (428)
..|++++.++ +||++||.++.. ..+++++||+.+++|+.++++|.+|..|++++++++||++||.+. ....+++++
T Consensus 104 ~~~~~~~~~~-~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~ 179 (301)
T 2vpj_A 104 GLAGATTLGD-MIYVSGGFDGSR-RHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDG--LNILNSVEK 179 (301)
T ss_dssp BSCEEEEETT-EEEEECCBCSSC-BCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCS--SCBCCCEEE
T ss_pred cceeEEEECC-EEEEEcccCCCc-ccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCC--CcccceEEE
Confidence 8999999987 999999987543 578999999999999999999999999999999999999999863 345789999
Q ss_pred EeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCC--ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEE
Q 014222 238 YDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHR--QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYAL 315 (428)
Q Consensus 238 yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~--~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~ 315 (428)
||+.+++|+.++++|.+|..+++++++++||++||.... ...+++||+++++|+.++.++.++..+++++++++||++
T Consensus 180 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~ 259 (301)
T 2vpj_A 180 YDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAI 259 (301)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred EeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEE
Confidence 999999999999999999999999999999999986433 345899999999999998877777777788899999999
Q ss_pred EccCC----cEEEEEeCCCCceeeCccccccc
Q 014222 316 DCKDG----CKIRVYDEVTDSWSKHIDSKMHL 343 (428)
Q Consensus 316 gG~~~----~~i~~yd~~~~~W~~v~~~~~~~ 343 (428)
||.++ +++++||+++++|+.++.+|.+.
T Consensus 260 GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r 291 (301)
T 2vpj_A 260 AGYDGNSLLSSIECYDPIIDSWEVVTSMGTQR 291 (301)
T ss_dssp CCBCSSSBEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred cCcCCCcccccEEEEcCCCCeEEEcCCCCccc
Confidence 99765 57999999999999998876543
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.2e-35 Score=284.28 Aligned_cols=248 Identities=17% Similarity=0.195 Sum_probs=196.5
Q ss_pred eCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECC--CCceeeCCCCC-cCCcceeeEEECCEEEEEc
Q 014222 146 PLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSAR--TNKWHRAPDML-RRRHFFGSCVINNCLYVAG 222 (428)
Q Consensus 146 ~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~--t~~W~~~~~~~-~~r~~~~~~~~~~~iyv~G 222 (428)
.+++||.+ |..+++++.++ +||++||.+. +++++||+. +++|+.+++|| .+|..|++++++++||++|
T Consensus 2 ~l~~lP~~---r~~~~~~~~~~-~iyv~GG~~~-----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~G 72 (357)
T 2uvk_A 2 VLPETPVP---FKSGTGAIDND-TVYIGLGSAG-----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFG 72 (357)
T ss_dssp CSCCCSSC---CCSCEEEEETT-EEEEECGGGT-----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEEC
T ss_pred CCCCCCcc---ccceEEEEECC-EEEEEeCcCC-----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEc
Confidence 46777775 77777777777 9999999863 379999998 49999999999 8999999999999999999
Q ss_pred cc-c--CCCCCCCCeEEEEeCCCCceEEcCCCC-CCccceEEEEECCEEEEEecCCCC----------------------
Q 014222 223 GE-N--GGVHRSLRSAEVYDPNKNRWSFISDMS-TAMVPFIGVVYEGKWFLKGLGSHR---------------------- 276 (428)
Q Consensus 223 G~-~--~~~~~~~~~v~~yd~~t~~W~~~~~~p-~~~~~~~~~~~~g~lyv~Gg~~~~---------------------- 276 (428)
|. . .+....++++++||+.+++|+.+++++ .+|..+++++++++||++||....
T Consensus 73 G~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
T 2uvk_A 73 GIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKI 152 (357)
T ss_dssp CEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhh
Confidence 98 2 112345789999999999999999988 889999999999999999996422
Q ss_pred --------------ceeEEEEeCCCCCeEecCCCCcCCCC-CceEEECCeEEEEEccCC-----cEEEEEeC--CCCcee
Q 014222 277 --------------QVLSEAYQPETDSWFPVYDGMVAGWR-NPSASLNRHLYALDCKDG-----CKIRVYDE--VTDSWS 334 (428)
Q Consensus 277 --------------~~~i~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~~~lyv~gG~~~-----~~i~~yd~--~~~~W~ 334 (428)
...+++||+.+++|+.+++++..++. +++++++++||++||.++ +.++.||+ ++++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~ 232 (357)
T 2uvk_A 153 NAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN 232 (357)
T ss_dssp HHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEE
T ss_pred hhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEE
Confidence 24699999999999999876655555 667889999999999642 46888976 999999
Q ss_pred eCcccccccCCcccccceEEEEeCCeEEEEeCCC--------------------eEEEEEeecCCCCCCCccccccceec
Q 014222 335 KHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNM--------------------SISLVDVSKSNGERGASAEHLWETIS 394 (428)
Q Consensus 335 ~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~--------------------~~~~v~~yd~~~~~~~~~~~~W~~~~ 394 (428)
.+..++.+..+ .+++++..+++|||+||.. ....+++||+.+ ++|+.++
T Consensus 233 ~~~~~~~~~~~----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~-------~~W~~~~ 301 (357)
T 2uvk_A 233 KLAPVSSPDGV----AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHN-------GKWDKSG 301 (357)
T ss_dssp ECCCSSTTTCC----BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----------CEEEE
T ss_pred ecCCCCCCccc----ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCC-------CceeeCC
Confidence 99887544322 3578899999999999942 236789999999 9999999
Q ss_pred cCCccccchh-----hhhhhhhcc
Q 014222 395 GKGQFKTLVT-----NLWSSIAGR 413 (428)
Q Consensus 395 ~~~~~~~f~~-----~~~~~~~~~ 413 (428)
.||..+.... +.+..++|.
T Consensus 302 ~~p~~r~~~~~~~~~~~i~v~GG~ 325 (357)
T 2uvk_A 302 ELSQGRAYGVSLPWNNSLLIIGGE 325 (357)
T ss_dssp ECSSCCBSSEEEEETTEEEEEEEE
T ss_pred CCCCCcccceeEEeCCEEEEEeee
Confidence 9998766332 345555554
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.5e-32 Score=283.87 Aligned_cols=243 Identities=11% Similarity=0.175 Sum_probs=193.3
Q ss_pred ccceEEEEeeCCC-CceeEEEEeCCCCceEeCC-CCC--CCCccccccEEEEE--eCCEEEEEeeeCCCCCCCceEEEEE
Q 014222 117 AEEWIYVIKRDRE-GKISWHAFDPIYQLWQPLP-PIP--KEYSEALGFGCAVL--SGCHLYLFGGKDPLKGSMRRVIFYS 190 (428)
Q Consensus 117 ~~~~l~v~gg~~~-~~~~~~~yd~~~~~W~~l~-~~~--~~~~~r~~~~~~~~--~~~~lyv~GG~~~~~~~~~~v~~yd 190 (428)
.++.||++||... ..+++++||+.+++|..++ +++ ..+.+|..|+++++ ++ +||++||.+......+++++||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCC-EEEEEcCCCCCCCccccEEEEe
Confidence 3789999998543 3357999999999999998 632 11224889999999 77 8999999976554678999999
Q ss_pred CCCCceeeCCCCCcCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCC---CCCCccceEEEEEC--
Q 014222 191 ARTNKWHRAPDMLRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISD---MSTAMVPFIGVVYE-- 264 (428)
Q Consensus 191 ~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~---~p~~~~~~~~~~~~-- 264 (428)
+.+++|+.+++||.+|..|+++++ +++||++||.+.. . ++++||+.+++|+.+++ +|.+|..+++++++
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~--~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEG--P---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSS--C---SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCC--C---CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence 999999999999999999999997 9999999998632 1 89999999999999986 88899999988877
Q ss_pred -CEEEEEecCCC----CceeEEEEeCCCCC------eEecCCCC-cCCCCCceEEEC-CeEEEEEccC-------CcEEE
Q 014222 265 -GKWFLKGLGSH----RQVLSEAYQPETDS------WFPVYDGM-VAGWRNPSASLN-RHLYALDCKD-------GCKIR 324 (428)
Q Consensus 265 -g~lyv~Gg~~~----~~~~i~~yd~~~~~------W~~~~~~~-~~~~~~~~~~~~-~~lyv~gG~~-------~~~i~ 324 (428)
++||++||... ....+++||+.+++ |+.+..++ .++..+++++++ ++||++||.+ .++++
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEE
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEE
Confidence 99999998632 23459999999999 88887643 445556677888 9999999964 25799
Q ss_pred EEeCCCCceeeCccccccc---CCcccccceEEEEeCC-eEEEEeCC
Q 014222 325 VYDEVTDSWSKHIDSKMHL---GNSRALEAAALVPLNG-KLCIIRNN 367 (428)
Q Consensus 325 ~yd~~~~~W~~v~~~~~~~---~~~~~~~~~~~~~~~~-~lyv~GG~ 367 (428)
+||+++++|+.+. ++... +.+ .+.+++++.+++ +|||+||.
T Consensus 630 ~yd~~t~~W~~~~-~p~~~~~~~~p-~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 630 SLDPLSETLTSIP-ISRRIWEDHSL-MLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp EEETTTTEEEECC-CCHHHHHHSCC-CCSSCEEECC---CEEEECCE
T ss_pred EEECCCCeEEEee-ccccccCCCCc-cceeeeEEEeCCCEEEEEeCC
Confidence 9999999999653 22221 111 124577777766 99999994
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.98 E-value=9.9e-33 Score=284.72 Aligned_cols=290 Identities=14% Similarity=0.154 Sum_probs=214.1
Q ss_pred chhhhchHhHHhhhcCChhHHHHHhhCcc--cceEEEEeeCCC--------CceeEEEEeCCCCceEeCCCCCCCCcccc
Q 014222 89 CKLRLVCKRWHRLLSGNFYYSLRKSLGIA--EEWIYVIKRDRE--------GKISWHAFDPIYQLWQPLPPIPKEYSEAL 158 (428)
Q Consensus 89 ~~~~~v~k~W~~l~~~~~f~~~r~~~~~~--~~~l~v~gg~~~--------~~~~~~~yd~~~~~W~~l~~~~~~~~~r~ 158 (428)
..+.....+|..+...|. ........ ++.||++||... ....+++||+.+++|..++.++.+ +.
T Consensus 169 ~~~dp~~~~W~~~~~~P~---~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~---~~ 242 (656)
T 1k3i_A 169 TAPQPGLGRWGPTIDLPI---VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK---HD 242 (656)
T ss_dssp CCCCTTSCEEEEEEECSS---CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS---CC
T ss_pred ccCCCCCCeeeeeccCCC---CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCC---CC
Confidence 345566788988887774 11112222 789999998532 224789999999999999887765 43
Q ss_pred cc--EEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE-CCEEEEEccccCCCCCCCCeE
Q 014222 159 GF--GCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSA 235 (428)
Q Consensus 159 ~~--~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v 235 (428)
.+ +++++.+++||++||.+.. ++++||+.+++|.++++|+.+|..|+++++ +++||++||..++ ....+++
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~-~~~~~~~ 316 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSG-GVFEKNG 316 (656)
T ss_dssp CSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCS-SSCCCCE
T ss_pred CccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccC-Ccccccc
Confidence 44 3555444489999997632 799999999999999999999999999999 9999999995433 3457899
Q ss_pred EEEeCCCCceEEcC-----CCCCCccceEEEEECCEEEEEecCCCC------ceeEEEEeCCCCCeEecCCCCcC-----
Q 014222 236 EVYDPNKNRWSFIS-----DMSTAMVPFIGVVYEGKWFLKGLGSHR------QVLSEAYQPETDSWFPVYDGMVA----- 299 (428)
Q Consensus 236 ~~yd~~t~~W~~~~-----~~p~~~~~~~~~~~~g~lyv~Gg~~~~------~~~i~~yd~~~~~W~~~~~~~~~----- 299 (428)
++||+.+++|+.++ +++..+.. +++..++++|++||.+.. ...++.||+.+++|.........
T Consensus 317 e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~ 395 (656)
T 1k3i_A 317 EVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVA 395 (656)
T ss_dssp EEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEEC
T ss_pred eEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccC
Confidence 99999999999974 45555443 455579999999975422 34589999999998764332221
Q ss_pred -CCCCceEE----ECCeEEEEEccCC-------c---EEEEEeCCCCceeeCc--ccccccCCcccccceEEEEe-CCeE
Q 014222 300 -GWRNPSAS----LNRHLYALDCKDG-------C---KIRVYDEVTDSWSKHI--DSKMHLGNSRALEAAALVPL-NGKL 361 (428)
Q Consensus 300 -~~~~~~~~----~~~~lyv~gG~~~-------~---~i~~yd~~~~~W~~v~--~~~~~~~~~~~~~~~~~~~~-~~~l 361 (428)
....++++ .+++||++||.+. + .+++||+++++|..+. .|+..+ ..++++.+ +++|
T Consensus 396 ~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R------~~~~~~~l~~g~i 469 (656)
T 1k3i_A 396 PDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFAR------TFHTSVVLPDGST 469 (656)
T ss_dssp CCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCC------BSCEEEECTTSCE
T ss_pred CCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCc------ccCCeEECCCCCE
Confidence 11223333 4899999999532 2 6899999999999986 544332 23565555 9999
Q ss_pred EEEeCCC---------eEEEEEeecCCCCCCCccccccceeccCCccccchh
Q 014222 362 CIIRNNM---------SISLVDVSKSNGERGASAEHLWETISGKGQFKTLVT 404 (428)
Q Consensus 362 yv~GG~~---------~~~~v~~yd~~~~~~~~~~~~W~~~~~~~~~~~f~~ 404 (428)
||+||.. ....+++||+.+ ++|+.++.|+..|..+.
T Consensus 470 ~v~GG~~~~~~~~~~~~~~~v~~ydp~t-------~~W~~~~~~~~~R~~hs 514 (656)
T 1k3i_A 470 FITGGQRRGIPFEDSTPVFTPEIYVPEQ-------DTFYKQNPNSIVRVYHS 514 (656)
T ss_dssp EEECCBSBCCTTCCCSBCCCCEEEEGGG-------TEEEECCCCSSCCCTTE
T ss_pred EEECCcccCcCcCCCCcccceEEEcCCC-------CceeecCCCCCcccccc
Confidence 9999953 246799999999 99999999988776553
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=3.6e-31 Score=273.59 Aligned_cols=219 Identities=15% Similarity=0.185 Sum_probs=181.1
Q ss_pred ccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCC-C-----CCcCCcceeeEEE--CCEEEEEccccCCC
Q 014222 157 ALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAP-D-----MLRRRHFFGSCVI--NNCLYVAGGENGGV 228 (428)
Q Consensus 157 r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~-~-----~~~~r~~~~~~~~--~~~iyv~GG~~~~~ 228 (428)
|.++ +++.++ +||++||.+. ...+++++||+.+++|+.++ + +|.+|.+|+++++ +++||++||.+..
T Consensus 389 r~g~-~~~~~~-~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~- 463 (695)
T 2zwa_A 389 KFGD-VDVAGN-DVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAP- 463 (695)
T ss_dssp BSCE-EEECSS-CEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSST-
T ss_pred ceeE-EEEECC-EEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCC-
Confidence 4443 344666 8999999876 46789999999999999987 5 7899999999999 9999999998642
Q ss_pred CCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE-CCEEEEEecCCCCceeEEEEeCCCCCeEecCC---CCcCCCCCc
Q 014222 229 HRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY-EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYD---GMVAGWRNP 304 (428)
Q Consensus 229 ~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~---~~~~~~~~~ 304 (428)
...++++++||+.+++|+.++++|.+|..|+++++ +++|||+||..... .+++||+.+++|+.++. ++.++..++
T Consensus 464 ~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r~~~~ 542 (695)
T 2zwa_A 464 HQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNSLVSA 542 (695)
T ss_dssp TCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSCCBSC
T ss_pred CCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCccccee
Confidence 33578999999999999999999999999999997 99999999965544 79999999999999985 455555566
Q ss_pred eEEEC---CeEEEEEccCC------cEEEEEeCCCCc------eeeCcccccccCCcccccceEEEEeC-CeEEEEeCCC
Q 014222 305 SASLN---RHLYALDCKDG------CKIRVYDEVTDS------WSKHIDSKMHLGNSRALEAAALVPLN-GKLCIIRNNM 368 (428)
Q Consensus 305 ~~~~~---~~lyv~gG~~~------~~i~~yd~~~~~------W~~v~~~~~~~~~~~~~~~~~~~~~~-~~lyv~GG~~ 368 (428)
+++++ ++||++||... +++++||+.+++ |+.+..+| ..++ .+++++.++ ++|||+||..
T Consensus 543 a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p-~~~R----~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 543 GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP-LFQR----YGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECG-GGCC----BSCEEEEEETTEEEEECCBC
T ss_pred EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCC-CCCc----ccceEEEeCCCEEEEECCcc
Confidence 57766 89999999732 579999999999 88887653 1222 357888888 9999999953
Q ss_pred ------eEEEEEeecCCCCCCCcccccccee
Q 014222 369 ------SISLVDVSKSNGERGASAEHLWETI 393 (428)
Q Consensus 369 ------~~~~v~~yd~~~~~~~~~~~~W~~~ 393 (428)
....+++||+.+ ++|+.+
T Consensus 618 ~~~~~~~~~~v~~yd~~t-------~~W~~~ 641 (695)
T 2zwa_A 618 PSGLFDRTNSIISLDPLS-------ETLTSI 641 (695)
T ss_dssp SSCCCCTTTSEEEEETTT-------TEEEEC
T ss_pred CCCCCCCCCeEEEEECCC-------CeEEEe
Confidence 245799999999 999864
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=2.1e-29 Score=259.95 Aligned_cols=277 Identities=13% Similarity=0.063 Sum_probs=201.1
Q ss_pred cchhhhchHhHHhhhcCChhHHHHHhhC-----cccceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEE
Q 014222 88 HCKLRLVCKRWHRLLSGNFYYSLRKSLG-----IAEEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGC 162 (428)
Q Consensus 88 l~~~~~v~k~W~~l~~~~~f~~~r~~~~-----~~~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~ 162 (428)
...+....++|..+...+. .|..++ ..++.||++||.... ++++|||.+++|..+++|+.+ |..|++
T Consensus 221 ~~~yd~~t~~w~~~~~~~~---~~~~~~~~~~~~~~g~lyv~GG~~~~--~v~~yd~~t~~W~~~~~~~~~---R~~~s~ 292 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVTVT---KHDMFCPGISMDGNGQIVVTGGNDAK--KTSLYDSSSDSWIPGPDMQVA---RGYQSS 292 (656)
T ss_dssp EEEECTTTCCBCCCEEEEC---SCCCSSCEEEECTTSCEEEECSSSTT--CEEEEEGGGTEEEECCCCSSC---CSSCEE
T ss_pred EEEEeCCCCcEEeCcccCC---CCCCccccccCCCCCCEEEeCCCCCC--ceEEecCcCCceeECCCCCcc---ccccce
Confidence 4456777888988876543 233222 137899999985433 799999999999999999886 889999
Q ss_pred EEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeC-----CCCCcCCcceeeEEECCEEEEEccccCCC--CCCCCe
Q 014222 163 AVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRA-----PDMLRRRHFFGSCVINNCLYVAGGENGGV--HRSLRS 234 (428)
Q Consensus 163 ~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~-----~~~~~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~ 234 (428)
+++ +| +||++||........+++++||+.+++|+.+ .+|+.+|.. +++..++++|++||.+... ......
T Consensus 293 ~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~ 370 (656)
T 1k3i_A 293 ATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTA 370 (656)
T ss_dssp EECTTS-CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSE
T ss_pred EEecCC-eEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccc
Confidence 998 66 8999999533333678999999999999997 456666554 5666899999999975211 134678
Q ss_pred EEEEeCCCCceEEcCC-CCC------CccceEEEE---ECCEEEEEecCCC-----Cce---eEEEEeCCCCCeEecC--
Q 014222 235 AEVYDPNKNRWSFISD-MST------AMVPFIGVV---YEGKWFLKGLGSH-----RQV---LSEAYQPETDSWFPVY-- 294 (428)
Q Consensus 235 v~~yd~~t~~W~~~~~-~p~------~~~~~~~~~---~~g~lyv~Gg~~~-----~~~---~i~~yd~~~~~W~~~~-- 294 (428)
++.||+.++.|..... .+. .+..++++. .+++||++||... ... .+++||+.+++|+.+.
T Consensus 371 v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~ 450 (656)
T 1k3i_A 371 MNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASN 450 (656)
T ss_dssp EEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTT
T ss_pred eeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccC
Confidence 9999999999875432 111 122334443 4899999998432 112 5889999999999986
Q ss_pred CCCcCCCCCceEEE-CCeEEEEEccCC----------cEEEEEeCCCCceeeCcccccccCCcccccceEEEEe--CCeE
Q 014222 295 DGMVAGWRNPSASL-NRHLYALDCKDG----------CKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPL--NGKL 361 (428)
Q Consensus 295 ~~~~~~~~~~~~~~-~~~lyv~gG~~~----------~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~--~~~l 361 (428)
.++..+..+.++++ +++||++||.+. ..+++||+++++|+.++.++.++ ..|+++.+ +++|
T Consensus 451 ~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R------~~hs~a~ll~dg~v 524 (656)
T 1k3i_A 451 GLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVR------VYHSISLLLPDGRV 524 (656)
T ss_dssp CCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCC------CTTEEEEECTTSCE
T ss_pred CCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCcc------ccccHhhcCCCcEE
Confidence 55555555666777 999999999641 46999999999999998765432 23554444 9999
Q ss_pred EEEeCCC------eEEEEEeecCCC
Q 014222 362 CIIRNNM------SISLVDVSKSNG 380 (428)
Q Consensus 362 yv~GG~~------~~~~v~~yd~~~ 380 (428)
|++||.. ...++++|.|.=
T Consensus 525 ~v~GG~~~~~~~~~~~~~e~~~Ppy 549 (656)
T 1k3i_A 525 FNGGGGLCGDCTTNHFDAQIFTPNY 549 (656)
T ss_dssp EEEECCCCTTCSCCCCEEEEEECGG
T ss_pred EecCCCCCCCCCCCeeEEEEEeChh
Confidence 9999952 133577887753
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.83 E-value=1e-06 Score=85.63 Aligned_cols=272 Identities=15% Similarity=0.198 Sum_probs=148.1
Q ss_pred CCCCChHHHHHHhcccccCCccchhhhchHhHHhhhcCChhHHHHHh---------------------------------
Q 014222 67 LLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLRKS--------------------------------- 113 (428)
Q Consensus 67 ~~~~lpddl~~~il~rlp~~~l~~~~~v~k~W~~l~~~~~f~~~r~~--------------------------------- 113 (428)
.+..||+|++..||..|+..++.++..|||+|+.+..++.+.+....
T Consensus 18 ~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~~~ 97 (445)
T 2ovr_B 18 FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQH 97 (445)
T ss_dssp TTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHHHH
T ss_pred hhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhhhh
Confidence 57789999999999999999999999999999999887654332110
Q ss_pred -------hC----------cccceE---------EEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeC
Q 014222 114 -------LG----------IAEEWI---------YVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSG 167 (428)
Q Consensus 114 -------~~----------~~~~~l---------~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~ 167 (428)
.+ +.+..+ ++.|+ ....+.+||..+++-.. .+... ..........+
T Consensus 98 ~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~---~dg~i~vwd~~~~~~~~--~~~~h---~~~v~~~~~~~ 169 (445)
T 2ovr_B 98 RIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGS---DDNTLKVWSAVTGKCLR--TLVGH---TGGVWSSQMRD 169 (445)
T ss_dssp HHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEE---TTSCEEEEETTTCCEEE--ECCCC---SSCEEEEEEET
T ss_pred hhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEE---CCCcEEEEECCCCcEEE--EEcCC---CCCEEEEEecC
Confidence 00 000011 11111 12357778877665322 11111 11122233345
Q ss_pred CEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEE
Q 014222 168 CHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF 247 (428)
Q Consensus 168 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~ 247 (428)
.+++.|+.++ .+.+||..+++-... +............++..++.|+.+ ..+.+||..+.+-..
T Consensus 170 -~~l~s~~~dg------~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~s~s~d-------g~i~~wd~~~~~~~~ 233 (445)
T 2ovr_B 170 -NIIISGSTDR------TLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRD-------ATLRVWDIETGQCLH 233 (445)
T ss_dssp -TEEEEEETTS------CEEEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETT-------SEEEEEESSSCCEEE
T ss_pred -CEEEEEeCCC------eEEEEECCcCcEEEE--ECCCCCcEEEEEecCCEEEEEeCC-------CEEEEEECCCCcEEE
Confidence 4777777543 588999887753321 111111222333345556666653 578999988765322
Q ss_pred cCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCCcEEEEEe
Q 014222 248 ISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDGCKIRVYD 327 (428)
Q Consensus 248 ~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd 327 (428)
.- .........+..++..++.|+.+. .+..||+.+.+-...- ........++..++..++.|+.++ .|.+||
T Consensus 234 ~~--~~~~~~v~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~d~-~i~i~d 305 (445)
T 2ovr_B 234 VL--MGHVAAVRCVQYDGRRVVSGAYDF---MVKVWDPETETCLHTL--QGHTNRVYSLQFDGIHVVSGSLDT-SIRVWD 305 (445)
T ss_dssp EE--ECCSSCEEEEEECSSCEEEEETTS---CEEEEEGGGTEEEEEE--CCCSSCEEEEEECSSEEEEEETTS-CEEEEE
T ss_pred EE--cCCcccEEEEEECCCEEEEEcCCC---EEEEEECCCCcEeEEe--cCCCCceEEEEECCCEEEEEeCCC-eEEEEE
Confidence 11 111112233445777777766432 3678888765432211 111111123455888888887664 799999
Q ss_pred CCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 328 EVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 328 ~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
..+.+-.. .+..... ....+..++.+++.|+.++ .+.+||..+
T Consensus 306 ~~~~~~~~--~~~~~~~------~v~~~~~~~~~l~~~~~dg--~i~vwd~~~ 348 (445)
T 2ovr_B 306 VETGNCIH--TLTGHQS------LTSGMELKDNILVSGNADS--TVKIWDIKT 348 (445)
T ss_dssp TTTCCEEE--EECCCCS------CEEEEEEETTEEEEEETTS--CEEEEETTT
T ss_pred CCCCCEEE--EEcCCcc------cEEEEEEeCCEEEEEeCCC--eEEEEECCC
Confidence 98764322 1111111 1233344566666676544 356777755
No 20
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.76 E-value=5.1e-07 Score=88.21 Aligned_cols=279 Identities=12% Similarity=0.090 Sum_probs=143.9
Q ss_pred CCCCChHHHHHHhcccccCCccchhhhchHhHHhhhcC-ChhHHHHH--------------------h------------
Q 014222 67 LLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSG-NFYYSLRK--------------------S------------ 113 (428)
Q Consensus 67 ~~~~lpddl~~~il~rlp~~~l~~~~~v~k~W~~l~~~-~~f~~~r~--------------------~------------ 113 (428)
.+..||+|++.+||..||..++.++..|||+|+.++.+ +.+.+... .
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLISENFVSPKGFNSLNLKLSQKYPKLSQQDRLRL 93 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHHHTTSCCTTTHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccccccccchhhhhhhhhccCCCcccchhhHH
Confidence 57789999999999999999999999999999999988 43222100 0
Q ss_pred -------------hCcccceEEEEeeCC-----------------CCceeEEEEeCCCCceEeCCCCCCCCccccccEEE
Q 014222 114 -------------LGIAEEWIYVIKRDR-----------------EGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCA 163 (428)
Q Consensus 114 -------------~~~~~~~l~v~gg~~-----------------~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~ 163 (428)
..........+.+.. .....+.+||..+++-.. .+... ...-.+++
T Consensus 94 ~~~~~~~~~~~w~~~~~~~~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~--~~~~h--~~~V~~l~ 169 (464)
T 3v7d_B 94 SFLENIFILKNWYNPKFVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLL--QLSGH--DGGVWALK 169 (464)
T ss_dssp HHHHHHHHHHHHHCTTCCCEEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEE--EECCC--SSCEEEEE
T ss_pred HHHHhhhhHhhhcCCCcCcceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEE--EEeCC--CcCEEEEE
Confidence 000000111111100 111257777876665221 11111 11223344
Q ss_pred EEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE---CCEEEEEccccCCCCCCCCeEEEEeC
Q 014222 164 VLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI---NNCLYVAGGENGGVHRSLRSAEVYDP 240 (428)
Q Consensus 164 ~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~v~~yd~ 240 (428)
...++ .++.|+.++ .+.++|..+++-...-.-.... -.++... ++..++.|+.+ ..+.+||.
T Consensus 170 ~~~~~-~l~s~s~dg------~i~vwd~~~~~~~~~~~~h~~~-v~~l~~~~~~~~~~l~s~s~d-------~~i~vwd~ 234 (464)
T 3v7d_B 170 YAHGG-ILVSGSTDR------TVRVWDIKKGCCTHVFEGHNST-VRCLDIVEYKNIKYIVTGSRD-------NTLHVWKL 234 (464)
T ss_dssp ECSTT-EEEEEETTS------CEEEEETTTTEEEEEECCCSSC-EEEEEEEESSSCEEEEEEETT-------SCEEEEEC
T ss_pred EcCCC-EEEEEeCCC------CEEEEECCCCcEEEEECCCCCc-cEEEEEecCCCCCEEEEEcCC-------CcEEEeeC
Confidence 44453 666776543 5889998877543221111111 1112222 45777777754 46788888
Q ss_pred CCCceEEcCC---------------------CCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcC
Q 014222 241 NKNRWSFISD---------------------MSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVA 299 (428)
Q Consensus 241 ~t~~W~~~~~---------------------~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~ 299 (428)
.+..-..... +............++.+.+.|+.+. .+..||..+.+-...-....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~~~~- 310 (464)
T 3v7d_B 235 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN---TLIVWDVAQMKCLYILSGHT- 310 (464)
T ss_dssp CCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTS---CEEEEETTTTEEEEEECCCS-
T ss_pred CCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCC---eEEEEECCCCcEEEEecCCC-
Confidence 7664221100 0000111122234455555555332 46789987765332211011
Q ss_pred CCCCceE--EECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeec
Q 014222 300 GWRNPSA--SLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSK 377 (428)
Q Consensus 300 ~~~~~~~--~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd 377 (428)
.....+ .-++..++.|+.++ .|.+||..+.+-.. .+.... .....+...+..++.|+.++ .+.+||
T Consensus 311 -~~v~~~~~~~~~~~l~sg~~dg-~i~vwd~~~~~~~~--~~~~h~------~~v~~~~~~~~~l~s~s~dg--~v~vwd 378 (464)
T 3v7d_B 311 -DRIYSTIYDHERKRCISASMDT-TIRIWDLENGELMY--TLQGHT------ALVGLLRLSDKFLVSAAADG--SIRGWD 378 (464)
T ss_dssp -SCEEEEEEETTTTEEEEEETTS-CEEEEETTTTEEEE--EECCCS------SCEEEEEECSSEEEEEETTS--EEEEEE
T ss_pred -CCEEEEEEcCCCCEEEEEeCCC-cEEEEECCCCcEEE--EEeCCC------CcEEEEEEcCCEEEEEeCCC--cEEEEE
Confidence 111122 23566777777654 79999998764222 221111 11334445567777777654 356777
Q ss_pred CCC
Q 014222 378 SNG 380 (428)
Q Consensus 378 ~~~ 380 (428)
..+
T Consensus 379 ~~~ 381 (464)
T 3v7d_B 379 AND 381 (464)
T ss_dssp TTT
T ss_pred CCC
Confidence 766
No 21
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.76 E-value=4.6e-07 Score=87.96 Aligned_cols=274 Identities=15% Similarity=0.162 Sum_probs=148.8
Q ss_pred CCCCChHH----HHHHhcccccCCccchhhhchHhHHhhhcCChhHHHHHh-----------------------------
Q 014222 67 LLPGLPDD----LAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLRKS----------------------------- 113 (428)
Q Consensus 67 ~~~~lpdd----l~~~il~rlp~~~l~~~~~v~k~W~~l~~~~~f~~~r~~----------------------------- 113 (428)
.+..||+| ++..||..|+..+|.++..|||+|+.++.++.+.+....
T Consensus 10 ~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 89 (435)
T 1p22_A 10 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPD 89 (435)
T ss_dssp HHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC------
T ss_pred hHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCC
Confidence 56779999 999999999999999999999999988876543221000
Q ss_pred ----------------------------hCc-----------c---------cceEEEEeeCCCCceeEEEEeCCCCceE
Q 014222 114 ----------------------------LGI-----------A---------EEWIYVIKRDREGKISWHAFDPIYQLWQ 145 (428)
Q Consensus 114 ----------------------------~~~-----------~---------~~~l~v~gg~~~~~~~~~~yd~~~~~W~ 145 (428)
.+. . ++..++.|+ ....+.+||..+.+-.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~---~dg~i~iwd~~~~~~~ 166 (435)
T 1p22_A 90 GNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGL---RDNTIKIWDKNTLECK 166 (435)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEE---SSSCEEEEESSSCCEE
T ss_pred CCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEe---CCCeEEEEeCCCCeEE
Confidence 000 0 011122221 1125777887766533
Q ss_pred eCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEcccc
Q 014222 146 PLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGEN 225 (428)
Q Consensus 146 ~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~ 225 (428)
.. +... .........++ .+++.|+.++ .+.+||..+++-... +............++..++.|+.+
T Consensus 167 ~~--~~~h---~~~v~~l~~~~-~~l~sg~~dg------~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~d 232 (435)
T 1p22_A 167 RI--LTGH---TGSVLCLQYDE-RVIITGSSDS------TVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKD 232 (435)
T ss_dssp EE--ECCC---SSCEEEEECCS-SEEEEEETTS------CEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETT
T ss_pred EE--EcCC---CCcEEEEEECC-CEEEEEcCCC------eEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCC
Confidence 22 1111 11122233355 5777777553 588999887764322 111122223333455566667654
Q ss_pred CCCCCCCCeEEEEeCCCCceEEc-CCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCc
Q 014222 226 GGVHRSLRSAEVYDPNKNRWSFI-SDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNP 304 (428)
Q Consensus 226 ~~~~~~~~~v~~yd~~t~~W~~~-~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~ 304 (428)
..+.+||..+..-... ..+............++...+.|+.+ ..+..||..+.+-...-. .......
T Consensus 233 -------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~--~~~~~v~ 300 (435)
T 1p22_A 233 -------RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD---RTIKVWNTSTCEFVRTLN--GHKRGIA 300 (435)
T ss_dssp -------SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT---SEEEEEETTTCCEEEEEE--CCSSCEE
T ss_pred -------CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC---CeEEEEECCcCcEEEEEc--CCCCcEE
Confidence 5788999877642211 11111111223333466656665542 246789988765332211 1111112
Q ss_pred eEEECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 305 SASLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 305 ~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
++..++.+++.|+.++ .|.+||..+.+-. ..+.... .....+..+++.++.|+.++ .+.+||..+
T Consensus 301 ~~~~~~~~l~~g~~dg-~i~iwd~~~~~~~--~~~~~h~------~~v~~~~~~~~~l~sg~~dg--~i~vwd~~~ 365 (435)
T 1p22_A 301 CLQYRDRLVVSGSSDN-TIRLWDIECGACL--RVLEGHE------ELVRCIRFDNKRIVSGAYDG--KIKVWDLVA 365 (435)
T ss_dssp EEEEETTEEEEEETTS-CEEEEETTTCCEE--EEECCCS------SCEEEEECCSSEEEEEETTS--CEEEEEHHH
T ss_pred EEEeCCCEEEEEeCCC-eEEEEECCCCCEE--EEEeCCc------CcEEEEEecCCEEEEEeCCC--cEEEEECCC
Confidence 3455777778887664 7999999875422 2211111 11334445788888887655 355677654
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.60 E-value=2.6e-05 Score=72.66 Aligned_cols=231 Identities=10% Similarity=-0.050 Sum_probs=131.7
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCce-EeCCCCCCCCccccccEEEE-EeCCEEEEEeeeCCCCCCCceEEEEECCCCc
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLW-QPLPPIPKEYSEALGFGCAV-LSGCHLYLFGGKDPLKGSMRRVIFYSARTNK 195 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W-~~l~~~~~~~~~r~~~~~~~-~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 195 (428)
++.+|+... ....+.++|+.+.+- ..++.... -..+++ .++ ++|+.... ...+.++|+.+++
T Consensus 53 ~~~lyv~~~---~~~~v~viD~~t~~~~~~i~~~~~------p~~i~~~~~g-~lyv~~~~------~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 53 DGIGWIVVN---NSHVIFAIDINTFKEVGRITGFTS------PRYIHFLSDE-KAYVTQIW------DYRIFIINPKTYE 116 (328)
T ss_dssp TTEEEEEEG---GGTEEEEEETTTCCEEEEEECCSS------EEEEEEEETT-EEEEEEBS------CSEEEEEETTTTE
T ss_pred CCEEEEEEc---CCCEEEEEECcccEEEEEcCCCCC------CcEEEEeCCC-eEEEEECC------CCeEEEEECCCCe
Confidence 567788763 234789999998875 33432222 235555 455 89998642 3479999999987
Q ss_pred eeeCCCCCc----CCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEe
Q 014222 196 WHRAPDMLR----RRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKG 271 (428)
Q Consensus 196 W~~~~~~~~----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~G 271 (428)
-...-+... ...-..+++.++++|+..-. ....+.++|+.+.+....-+... .....+..-+|++|+..
T Consensus 117 ~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~------~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~ 189 (328)
T 3dsm_A 117 ITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS------YQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTIT 189 (328)
T ss_dssp EEEEEECTTCCTTTCBCCCEEEETTEEEEEECT------TCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEB
T ss_pred EEEEEEcCCccccCCCcceEEEECCEEEEEcCC------CCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEE
Confidence 542111111 00222345578999998421 12689999999987643221111 11112223478999885
Q ss_pred cCC--CC-----ceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccc
Q 014222 272 LGS--HR-----QVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMH 342 (428)
Q Consensus 272 g~~--~~-----~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~ 342 (428)
... .. ...+.++|+++.+....-..+....-...+.. ++.||+..+ .|++||+++.+.......+..
T Consensus 190 ~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----~v~~~d~~t~~~~~~~~~~~~ 265 (328)
T 3dsm_A 190 DGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----DIWRMPVEADRVPVRPFLEFR 265 (328)
T ss_dssp CCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS----SEEEEETTCSSCCSSCSBCCC
T ss_pred CCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc----EEEEEECCCCceeeeeeecCC
Confidence 322 10 24689999998876533221111111123333 567888754 799999998775432221111
Q ss_pred cCCcccccceEEEE--eCCeEEEEeC--CCeEEEEEeecCCC
Q 014222 343 LGNSRALEAAALVP--LNGKLCIIRN--NMSISLVDVSKSNG 380 (428)
Q Consensus 343 ~~~~~~~~~~~~~~--~~~~lyv~GG--~~~~~~v~~yd~~~ 380 (428)
...+ .+++. .+++||+... +.....|.+||++.
T Consensus 266 ~~~p-----~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 266 DTKY-----YGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQG 302 (328)
T ss_dssp SSCE-----EEEEECTTTCCEEEEECTTSSSEEEEEEECTTC
T ss_pred CCce-----EEEEEcCCCCeEEEEcccccccCCEEEEECCCC
Confidence 1111 23333 4789999862 23467799999876
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.43 E-value=0.00018 Score=66.92 Aligned_cols=229 Identities=10% Similarity=-0.045 Sum_probs=130.3
Q ss_pred EEEEeeC--CCCceeEEEEeCCCCceEeCCCC--CCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCce
Q 014222 121 IYVIKRD--REGKISWHAFDPIYQLWQPLPPI--PKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKW 196 (428)
Q Consensus 121 l~v~gg~--~~~~~~~~~yd~~~~~W~~l~~~--~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 196 (428)
+||.... .....++..||+.++++..--.. ...........++..++ ++|+.... ...+.++|+.|.+-
T Consensus 4 ~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~-~lyv~~~~------~~~v~viD~~t~~~ 76 (328)
T 3dsm_A 4 LFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDG-IGWIVVNN------SHVIFAIDINTFKE 76 (328)
T ss_dssp EEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETT-EEEEEEGG------GTEEEEEETTTCCE
T ss_pred EEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECC-EEEEEEcC------CCEEEEEECcccEE
Confidence 4555422 22346899999999987542100 00000122345555555 89998642 34799999998875
Q ss_pred -eeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCC----ccceEEEEECCEEEEE
Q 014222 197 -HRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTA----MVPFIGVVYEGKWFLK 270 (428)
Q Consensus 197 -~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~----~~~~~~~~~~g~lyv~ 270 (428)
..++.... ...+++ -++++|+....+ ..+.++|+.+.+-...-+.... .....++.-++++|+.
T Consensus 77 ~~~i~~~~~---p~~i~~~~~g~lyv~~~~~-------~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~ 146 (328)
T 3dsm_A 77 VGRITGFTS---PRYIHFLSDEKAYVTQIWD-------YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVN 146 (328)
T ss_dssp EEEEECCSS---EEEEEEEETTEEEEEEBSC-------SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEE
T ss_pred EEEcCCCCC---CcEEEEeCCCeEEEEECCC-------CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEE
Confidence 33432222 223444 688999986432 6899999999865421111110 0222344479999998
Q ss_pred ecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccC---------CcEEEEEeCCCCceeeCccccc
Q 014222 271 GLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKD---------GCKIRVYDEVTDSWSKHIDSKM 341 (428)
Q Consensus 271 Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~---------~~~i~~yd~~~~~W~~v~~~~~ 341 (428)
... ....+.++|+++++......... .-......-+|++|+..... ...|+++|+++.+....-.++.
T Consensus 147 ~~~--~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~ 223 (328)
T 3dsm_A 147 CWS--YQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL 223 (328)
T ss_dssp ECT--TCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT
T ss_pred cCC--CCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC
Confidence 531 12357899999887654321111 11111223468888886432 2589999999887654322221
Q ss_pred ccCCcccccceEEEEe--CCeEEEEeCCCeEEEEEeecCCC
Q 014222 342 HLGNSRALEAAALVPL--NGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 342 ~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
. ..+ ..++.. ++.||+..+ .+.++|+.+
T Consensus 224 g-~~p-----~~la~~~d~~~lyv~~~-----~v~~~d~~t 253 (328)
T 3dsm_A 224 G-DWP-----SEVQLNGTRDTLYWINN-----DIWRMPVEA 253 (328)
T ss_dssp T-CCC-----EEEEECTTSCEEEEESS-----SEEEEETTC
T ss_pred C-CCc-----eeEEEecCCCEEEEEcc-----EEEEEECCC
Confidence 1 011 233333 677888754 578999987
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.37 E-value=4.7e-05 Score=66.95 Aligned_cols=193 Identities=15% Similarity=0.065 Sum_probs=119.2
Q ss_pred cccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEE
Q 014222 158 LGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEV 237 (428)
Q Consensus 158 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~ 237 (428)
+..++...++ .+|+..|..+ .+.+.++|+.|++-...-+++..-.+.+++..+++||+....+ +.+.+
T Consensus 22 ftqGL~~~~~-~LyestG~~g----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-------~~v~v 89 (243)
T 3mbr_X 22 FTEGLFYLRG-HLYESTGETG----RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-------HEGFV 89 (243)
T ss_dssp CEEEEEEETT-EEEEEECCTT----SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-------SEEEE
T ss_pred ccccEEEECC-EEEEECCCCC----CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-------CEEEE
Confidence 4457776666 8999988754 3489999999998766555555556667888899999986543 68999
Q ss_pred EeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEe-cC--CCCcC-CCCCceEEECCeEE
Q 014222 238 YDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFP-VY--DGMVA-GWRNPSASLNRHLY 313 (428)
Q Consensus 238 yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~-~~--~~~~~-~~~~~~~~~~~~ly 313 (428)
||+.|.+-. ..++.+..+.+.+.-+++||+.-| ...+..+|+++.+-.. +. ....+ ..-.-....+|+||
T Consensus 90 ~D~~tl~~~--~ti~~~~~Gwglt~dg~~L~vSdg----s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~ly 163 (243)
T 3mbr_X 90 YDLATLTPR--ARFRYPGEGWALTSDDSHLYMSDG----TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELL 163 (243)
T ss_dssp EETTTTEEE--EEEECSSCCCEEEECSSCEEEECS----SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEE
T ss_pred EECCcCcEE--EEEeCCCCceEEeeCCCEEEEECC----CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEE
Confidence 999886532 222223344455555678888754 2347899999876432 21 11111 11112334699999
Q ss_pred EEEccCCcEEEEEeCCCCc---eeeCcccccccCC-----cccccceEEEEeCCeEEEEeCCCe
Q 014222 314 ALDCKDGCKIRVYDEVTDS---WSKHIDSKMHLGN-----SRALEAAALVPLNGKLCIIRNNMS 369 (428)
Q Consensus 314 v~gG~~~~~i~~yd~~~~~---W~~v~~~~~~~~~-----~~~~~~~~~~~~~~~lyv~GG~~~ 369 (428)
+-- ...+.|.+-|+++.+ |-.+..+.+.... ....-+-+...-+++|||.|-...
T Consensus 164 anv-w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp 226 (243)
T 3mbr_X 164 ANV-WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWP 226 (243)
T ss_dssp EEE-TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCS
T ss_pred EEE-CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 655 345699999999875 4444443222111 101112222233689999987654
No 25
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.17 E-value=6.9e-07 Score=58.87 Aligned_cols=43 Identities=33% Similarity=0.460 Sum_probs=38.5
Q ss_pred CCCCCChHHHHHHhcccccCCccchhhhchHhHHhhhcCChhH
Q 014222 66 PLLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYY 108 (428)
Q Consensus 66 ~~~~~lpddl~~~il~rlp~~~l~~~~~v~k~W~~l~~~~~f~ 108 (428)
..+..||+|++.+|+.++|..++.+++.|||+|+.++.++.+.
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 3578899999999999999999999999999999999988754
No 26
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.13 E-value=0.0037 Score=58.81 Aligned_cols=220 Identities=13% Similarity=0.174 Sum_probs=126.0
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCc--eEeCCCCCCC----CccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEEC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQL--WQPLPPIPKE----YSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSA 191 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~--W~~l~~~~~~----~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~ 191 (428)
++.||+...+ ..+.+||+.+++ |+.-...... .........++.++ .||+... ...++.+|.
T Consensus 53 ~~~v~~~~~~----g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~v~~~-------~g~l~a~d~ 120 (376)
T 3q7m_A 53 DNVVYAADRA----GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGG-HVYIGSE-------KAQVYALNT 120 (376)
T ss_dssp TTEEEEECTT----SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETT-EEEEEET-------TSEEEEEET
T ss_pred CCEEEEEcCC----CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCC-EEEEEcC-------CCEEEEEEC
Confidence 6778877532 378999998775 6543221100 00112223444455 7887532 237999999
Q ss_pred CCCc--eeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCc--eEEcCCCCC--CccceEEEEECC
Q 014222 192 RTNK--WHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNR--WSFISDMST--AMVPFIGVVYEG 265 (428)
Q Consensus 192 ~t~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~--~~~~~~~~~~~g 265 (428)
.|++ |+.-..- ......++.++.+|+.... ..+..||+.+.+ |+.-...+. .+.....+..++
T Consensus 121 ~tG~~~W~~~~~~---~~~~~p~~~~~~v~v~~~~--------g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~ 189 (376)
T 3q7m_A 121 SDGTVAWQTKVAG---EALSRPVVSDGLVLIHTSN--------GQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFG 189 (376)
T ss_dssp TTCCEEEEEECSS---CCCSCCEEETTEEEEECTT--------SEEEEEETTTCCEEEEEECCC-----CCCCCCEEETT
T ss_pred CCCCEEEEEeCCC---ceEcCCEEECCEEEEEcCC--------CeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECC
Confidence 8875 7653221 1122345668888885431 479999998764 876543221 111233455688
Q ss_pred EEEEEecCCCCceeEEEEeCCCC--CeEecCCCCcCC--------CCCceEEECCeEEEEEccCCcEEEEEeCCCC--ce
Q 014222 266 KWFLKGLGSHRQVLSEAYQPETD--SWFPVYDGMVAG--------WRNPSASLNRHLYALDCKDGCKIRVYDEVTD--SW 333 (428)
Q Consensus 266 ~lyv~Gg~~~~~~~i~~yd~~~~--~W~~~~~~~~~~--------~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~--~W 333 (428)
.+|+... ...+.+||+.++ .|+.-...+... .....++.++.+|+.+. ...+..+|+++. .|
T Consensus 190 ~v~~g~~----~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~--~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 190 AAVVGGD----NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY--NGNLTALDLRSGQIMW 263 (376)
T ss_dssp EEEECCT----TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT--TSCEEEEETTTCCEEE
T ss_pred EEEEEcC----CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec--CcEEEEEECCCCcEEe
Confidence 8887432 124789999876 477543212111 12234567888888753 237999999876 47
Q ss_pred eeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 334 SKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 334 ~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+.-.. . ....+..++.||+..... .+..+|+.+
T Consensus 264 ~~~~~------~-----~~~~~~~~~~l~~~~~~g---~l~~~d~~t 296 (376)
T 3q7m_A 264 KRELG------S-----VNDFIVDGNRIYLVDQND---RVMALTIDG 296 (376)
T ss_dssp EECCC------C-----EEEEEEETTEEEEEETTC---CEEEEETTT
T ss_pred eccCC------C-----CCCceEECCEEEEEcCCC---eEEEEECCC
Confidence 65321 1 134566789999976543 367888877
No 27
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.13 E-value=0.0002 Score=63.55 Aligned_cols=193 Identities=11% Similarity=-0.063 Sum_probs=114.9
Q ss_pred cccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEE
Q 014222 158 LGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEV 237 (428)
Q Consensus 158 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~ 237 (428)
+..++...++ .||+..|..+ .+.+.++|+.|++-..--+++..-.+.+++..+++||+....+ +.+.+
T Consensus 44 ftqGL~~~~~-~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-------~~v~v 111 (262)
T 3nol_A 44 FTEGFFYRNG-YFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-------GLGFV 111 (262)
T ss_dssp EEEEEEEETT-EEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-------SEEEE
T ss_pred ccceEEEECC-EEEEECCCCC----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-------CEEEE
Confidence 3456666655 8999988753 3478999999998655444544444556788899999996543 68999
Q ss_pred EeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEe-cCCC--CcCCCC-CceEEECCeEE
Q 014222 238 YDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFP-VYDG--MVAGWR-NPSASLNRHLY 313 (428)
Q Consensus 238 yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~-~~~~--~~~~~~-~~~~~~~~~ly 313 (428)
||+.+.+-. ..++.+..+.+.+.-+++||+.-| ...+..+|+++.+-.. +... ..+... .-....+|+||
T Consensus 112 ~D~~t~~~~--~ti~~~~eG~glt~dg~~L~~SdG----s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~ly 185 (262)
T 3nol_A 112 WNIRNLRQV--RSFNYDGEGWGLTHNDQYLIMSDG----TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIF 185 (262)
T ss_dssp EETTTCCEE--EEEECSSCCCCEEECSSCEEECCS----SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEE
T ss_pred EECccCcEE--EEEECCCCceEEecCCCEEEEECC----CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEE
Confidence 999887542 222222234444444667888754 2357899999876432 2210 011111 11334589999
Q ss_pred EEEccCCcEEEEEeCCCCc---eeeCccccccc----CCcccccceEEEEeCCeEEEEeCCCe
Q 014222 314 ALDCKDGCKIRVYDEVTDS---WSKHIDSKMHL----GNSRALEAAALVPLNGKLCIIRNNMS 369 (428)
Q Consensus 314 v~gG~~~~~i~~yd~~~~~---W~~v~~~~~~~----~~~~~~~~~~~~~~~~~lyv~GG~~~ 369 (428)
+-- ...+.|.+-|+++.+ |-.++.+.... +.....-+-+.-.-++.|||.|-...
T Consensus 186 an~-w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp 247 (262)
T 3nol_A 186 ANV-WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWP 247 (262)
T ss_dssp EEE-TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCS
T ss_pred EEE-ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 655 445689999999886 44444332211 00101112222233588999987654
No 28
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.00 E-value=2e-06 Score=77.72 Aligned_cols=49 Identities=33% Similarity=0.607 Sum_probs=44.2
Q ss_pred CCCCCCChHHHHHHhcccccCCccc-hhhhchHhHHhhhcCChhHHHHHh
Q 014222 65 SPLLPGLPDDLAIACLIRVPRVEHC-KLRLVCKRWHRLLSGNFYYSLRKS 113 (428)
Q Consensus 65 ~~~~~~lpddl~~~il~rlp~~~l~-~~~~v~k~W~~l~~~~~f~~~r~~ 113 (428)
...+..||+|++++||++||.++|. ++++|||+|+.|+.++.|...+..
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~ 97 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQ 97 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHH
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhh
Confidence 3467889999999999999999999 999999999999999998776654
No 29
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.94 E-value=0.00025 Score=62.99 Aligned_cols=189 Identities=11% Similarity=-0.036 Sum_probs=111.4
Q ss_pred ccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEE
Q 014222 159 GFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVY 238 (428)
Q Consensus 159 ~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~y 238 (428)
..++...++ .||+..|..+ .+.++|+.|++-..-- ++..-.+.+++..+++||+....+ +.+.+|
T Consensus 57 tqGL~~~~~-~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-------~~v~V~ 121 (268)
T 3nok_A 57 TQGLVFHQG-HFFESTGHQG------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-------GLLFTW 121 (268)
T ss_dssp EEEEEEETT-EEEEEETTTT------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-------CEEEEE
T ss_pred cceEEEECC-EEEEEcCCCC------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-------CEEEEE
Confidence 356666555 8999988642 3889999998754322 443334456788899999985543 689999
Q ss_pred eCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEe-cCC--CCcCCCC-CceEEECCeEEE
Q 014222 239 DPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFP-VYD--GMVAGWR-NPSASLNRHLYA 314 (428)
Q Consensus 239 d~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~-~~~--~~~~~~~-~~~~~~~~~lyv 314 (428)
|+.+.+-.. .++.+..+.+.+.-+++||+..| ...+..+|+++.+-.. +.. .+..... .-....+|+||+
T Consensus 122 D~~Tl~~~~--ti~~~~eGwGLt~Dg~~L~vSdG----s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lya 195 (268)
T 3nok_A 122 SGMPPQRER--TTRYSGEGWGLCYWNGKLVRSDG----GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYA 195 (268)
T ss_dssp ETTTTEEEE--EEECSSCCCCEEEETTEEEEECS----SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred ECCcCcEEE--EEeCCCceeEEecCCCEEEEECC----CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEE
Confidence 999875432 22222234455556788998854 2357899999876432 211 1111111 112345899995
Q ss_pred EEccCCcEEEEEeCCCCc---eeeCcccccccC---CcccccceEEEE--eCCeEEEEeCCCe
Q 014222 315 LDCKDGCKIRVYDEVTDS---WSKHIDSKMHLG---NSRALEAAALVP--LNGKLCIIRNNMS 369 (428)
Q Consensus 315 ~gG~~~~~i~~yd~~~~~---W~~v~~~~~~~~---~~~~~~~~~~~~--~~~~lyv~GG~~~ 369 (428)
-- +..+.|.+.|+++.+ |-.+..+..... ....-.--+++. -+++|||.|-...
T Consensus 196 nv-w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp 257 (268)
T 3nok_A 196 NI-WHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWP 257 (268)
T ss_dssp EE-TTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCS
T ss_pred EE-CCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCC
Confidence 54 445699999999885 444443321111 000000122332 3578999987644
No 30
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.89 E-value=0.0085 Score=56.28 Aligned_cols=208 Identities=13% Similarity=0.093 Sum_probs=116.2
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCc--eEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCc
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQL--WQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNK 195 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~--W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 195 (428)
++.+|+... ...+++||+.+++ |..-...+.. ..+.....++.++ .||+ |.. ...+..+|+.+++
T Consensus 143 ~~~v~v~~~----~g~l~~~d~~tG~~~W~~~~~~~~~-~~~~~~~~~~~~~-~v~~-g~~------~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 143 DGLVLIHTS----NGQLQALNEADGAVKWTVNLDMPSL-SLRGESAPTTAFG-AAVV-GGD------NGRVSAVLMEQGQ 209 (376)
T ss_dssp TTEEEEECT----TSEEEEEETTTCCEEEEEECCC------CCCCCCEEETT-EEEE-CCT------TTEEEEEETTTCC
T ss_pred CCEEEEEcC----CCeEEEEECCCCcEEEEEeCCCCce-eecCCCCcEEECC-EEEE-EcC------CCEEEEEECCCCc
Confidence 455555432 2368899998876 7653322110 0011123344455 6666 321 2368899998774
Q ss_pred --eeeCCCCCcCC--------cceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCC--ceEEcCCCCCCccceEEEEE
Q 014222 196 --WHRAPDMLRRR--------HFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWSFISDMSTAMVPFIGVVY 263 (428)
Q Consensus 196 --W~~~~~~~~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~~~~~~~~~~ 263 (428)
|+.-...+... .....++.++.+|+.+.. ..+.++|+.+. .|+.-.. .....+..
T Consensus 210 ~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~--------g~l~~~d~~tG~~~w~~~~~-----~~~~~~~~ 276 (376)
T 3q7m_A 210 MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYN--------GNLTALDLRSGQIMWKRELG-----SVNDFIVD 276 (376)
T ss_dssp EEEEEECCC-----------CCCCCCEEETTEEEEECTT--------SCEEEEETTTCCEEEEECCC-----CEEEEEEE
T ss_pred EEEEEecccCCCCcccccccccCCCcEEECCEEEEEecC--------cEEEEEECCCCcEEeeccCC-----CCCCceEE
Confidence 76532222111 223455678899886421 46889999776 5765321 12345567
Q ss_pred CCEEEEEecCCCCceeEEEEeCCCCC--eEecCCCCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCc--eeeCccc
Q 014222 264 EGKWFLKGLGSHRQVLSEAYQPETDS--WFPVYDGMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDS--WSKHIDS 339 (428)
Q Consensus 264 ~g~lyv~Gg~~~~~~~i~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~--W~~v~~~ 339 (428)
++.||+.... ..+.+||+.+++ |+.-. .........++.++.||+... ...+++||+++.+ |+.-..
T Consensus 277 ~~~l~~~~~~----g~l~~~d~~tG~~~w~~~~--~~~~~~~~~~~~~~~l~v~~~--~g~l~~~d~~tG~~~~~~~~~- 347 (376)
T 3q7m_A 277 GNRIYLVDQN----DRVMALTIDGGVTLWTQSD--LLHRLLTSPVLYNGNLVVGDS--EGYLHWINVEDGRFVAQQKVD- 347 (376)
T ss_dssp TTEEEEEETT----CCEEEEETTTCCEEEEECT--TTTSCCCCCEEETTEEEEECT--TSEEEEEETTTCCEEEEEECC-
T ss_pred CCEEEEEcCC----CeEEEEECCCCcEEEeecc--cCCCcccCCEEECCEEEEEeC--CCeEEEEECCCCcEEEEEecC-
Confidence 9999997532 247899998775 76542 112222334567888887653 2379999998875 553210
Q ss_pred ccccCCcccccceEEEEeCCeEEEEeCC
Q 014222 340 KMHLGNSRALEAAALVPLNGKLCIIRNN 367 (428)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~lyv~GG~ 367 (428)
... .....+..++.||+....
T Consensus 348 ~~~-------~~~~~~~~~~~l~v~~~~ 368 (376)
T 3q7m_A 348 SSG-------FQTEPVAADGKLLIQAKD 368 (376)
T ss_dssp TTC-------BCSCCEEETTEEEEEBTT
T ss_pred CCc-------ceeCCEEECCEEEEEeCC
Confidence 101 113344568899886543
No 31
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.87 E-value=0.00043 Score=65.37 Aligned_cols=223 Identities=15% Similarity=0.178 Sum_probs=115.0
Q ss_pred ceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 119 EWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 119 ~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
+.+|+.++. ...+.++|..+++-...-.... .-.+++.. ++..||+.++.+ ..+.++|..+++..
T Consensus 2 ~~l~vs~~~---d~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~d------~~i~v~d~~~~~~~ 67 (391)
T 1l0q_A 2 TFAYIANSE---SDNISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANAHS------NDVSIIDTATNNVI 67 (391)
T ss_dssp EEEEEEETT---TTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEGGG------TEEEEEETTTTEEE
T ss_pred CEEEEEcCC---CCEEEEEECCCCeEEEEeecCC-----CcceEEECCCCCEEEEECCCC------CeEEEEECCCCeEE
Confidence 356666632 2378899998876543211111 12344443 343577776543 37899999888754
Q ss_pred eCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE-CC-EEEEEecC
Q 014222 198 RAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY-EG-KWFLKGLG 273 (428)
Q Consensus 198 ~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~g-~lyv~Gg~ 273 (428)
..-.... .-..++.. +..||+.+..+ ..+.+||+.+.+-...-.... ....++.. ++ .+|+.++.
T Consensus 68 ~~~~~~~--~v~~~~~spdg~~l~~~~~~~-------~~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~ 136 (391)
T 1l0q_A 68 ATVPAGS--SPQGVAVSPDGKQVYVTNMAS-------STLSVIDTTSNTVAGTVKTGK--SPLGLALSPDGKKLYVTNNG 136 (391)
T ss_dssp EEEECSS--SEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETT
T ss_pred EEEECCC--CccceEECCCCCEEEEEECCC-------CEEEEEECCCCeEEEEEeCCC--CcceEEECCCCCEEEEEeCC
Confidence 4322222 11222222 34566665432 579999999886543322211 11222222 44 57677643
Q ss_pred CCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CC-eEEEEEccCCcEEEEEeCCCCceeeCcccccccCCccccc
Q 014222 274 SHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NR-HLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALE 350 (428)
Q Consensus 274 ~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~ 350 (428)
. ..+..||+.+.+....-.. ......+.+ ++ .||+.++.+ ..|.+||..+.+-...... . ...
T Consensus 137 ~---~~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~dg~~l~~~~~~~-~~v~~~d~~~~~~~~~~~~--~-~~~---- 202 (391)
T 1l0q_A 137 D---KTVSVINTVTKAVINTVSV---GRSPKGIAVTPDGTKVYVANFDS-MSISVIDTVTNSVIDTVKV--E-AAP---- 202 (391)
T ss_dssp T---TEEEEEETTTTEEEEEEEC---CSSEEEEEECTTSSEEEEEETTT-TEEEEEETTTTEEEEEEEC--S-SEE----
T ss_pred C---CEEEEEECCCCcEEEEEec---CCCcceEEECCCCCEEEEEeCCC-CEEEEEECCCCeEEEEEec--C-CCc----
Confidence 2 2578999988765443221 111122222 34 566666544 5899999988754433221 1 111
Q ss_pred ceEEEEeCC-eEEEEeCCCeEEEEEeecCCC
Q 014222 351 AAALVPLNG-KLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 351 ~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.......++ .||+.+.......+.+||+.+
T Consensus 203 ~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 203 SGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred cceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 122223344 455554321234577888776
No 32
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.82 E-value=0.0057 Score=54.21 Aligned_cols=226 Identities=13% Similarity=-0.041 Sum_probs=116.5
Q ss_pred cceEEE-EeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCce
Q 014222 118 EEWIYV-IKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKW 196 (428)
Q Consensus 118 ~~~l~v-~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 196 (428)
++.||+ ... ....+.+||+.+........... ..-.+++...++++|+... ...+.+||+.++..
T Consensus 34 ~g~l~v~~~~---~~~~i~~~~~~~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 34 AGNVYVTSEG---MYGRVVKLATGSTGTTVLPFNGL----YQPQGLAVDGAGTVYVTDF-------NNRVVTLAAGSNNQ 99 (270)
T ss_dssp TCCEEEEECS---SSCEEEEECC-----EECCCCSC----CSCCCEEECTTCCEEEEET-------TTEEEEECTTCSCC
T ss_pred CCCEEEEccC---CCCcEEEecCCCcccceEeeCCc----CCcceeEECCCCCEEEEcC-------CCEEEEEeCCCceE
Confidence 455777 422 22468889988766555432211 1234555554336888754 13689999987765
Q ss_pred eeCCCCCcCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE-ECCEEEEEecCC
Q 014222 197 HRAPDMLRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV-YEGKWFLKGLGS 274 (428)
Q Consensus 197 ~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~g~lyv~Gg~~ 274 (428)
..+..... ..-.++++. ++++|+..... ..+.+||..+............ ....++. -+|++|+....
T Consensus 100 ~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~-------~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~~~~g~l~v~~~~- 169 (270)
T 1rwi_B 100 TVLPFDGL-NYPEGLAVDTQGAVYVADRGN-------NRVVKLAAGSKTQTVLPFTGLN-DPDGVAVDNSGNVYVTDTD- 169 (270)
T ss_dssp EECCCCSC-SSEEEEEECTTCCEEEEEGGG-------TEEEEECTTCCSCEECCCCSCC-SCCCEEECTTCCEEEEEGG-
T ss_pred eeeecCCc-CCCcceEECCCCCEEEEECCC-------CEEEEEECCCceeEeeccccCC-CceeEEEeCCCCEEEEECC-
Confidence 54432111 112233333 57888875432 4788888777655433221111 1122222 26789987532
Q ss_pred CCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccce
Q 014222 275 HRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAA 352 (428)
Q Consensus 275 ~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~ 352 (428)
...+..||+....-..... ........+.+ +|.||+....+ ..|.+||+++..-..... .....+ ..
T Consensus 170 --~~~i~~~~~~~~~~~~~~~--~~~~~p~~i~~d~~g~l~v~~~~~-~~v~~~~~~~~~~~~~~~--~~~~~p----~~ 238 (270)
T 1rwi_B 170 --NNRVVKLEAESNNQVVLPF--TDITAPWGIAVDEAGTVYVTEHNT-NQVVKLLAGSTTSTVLPF--TGLNTP----LA 238 (270)
T ss_dssp --GTEEEEECTTTCCEEECCC--SSCCSEEEEEECTTCCEEEEETTT-SCEEEECTTCSCCEECCC--CSCSCE----EE
T ss_pred --CCEEEEEecCCCceEeecc--cCCCCceEEEECCCCCEEEEECCC-CcEEEEcCCCCcceeecc--CCCCCc----ee
Confidence 2247899988766443321 11111112333 56899887533 479999998764333211 011111 12
Q ss_pred EEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 353 ALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 353 ~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.++..+++||+..... ..|.+|+...
T Consensus 239 i~~~~~g~l~v~~~~~--~~v~~~~~~~ 264 (270)
T 1rwi_B 239 VAVDSDRTVYVADRGN--DRVVKLTSLE 264 (270)
T ss_dssp EEECTTCCEEEEEGGG--TEEEEECCCG
T ss_pred EEECCCCCEEEEECCC--CEEEEEcCCC
Confidence 2233457899886533 3577888766
No 33
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.81 E-value=0.0026 Score=55.85 Aligned_cols=152 Identities=19% Similarity=0.062 Sum_probs=98.0
Q ss_pred eeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCC
Q 014222 210 GSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDS 289 (428)
Q Consensus 210 ~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~ 289 (428)
+....++.+|+..|... .+++.++|+.+.+=..--+++....+.+.+..+++||+.... ...+.+||+++.+
T Consensus 25 GL~~~~~~LyestG~~g-----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~---~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETG-----RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR---NHEGFVYDLATLT 96 (243)
T ss_dssp EEEEETTEEEEEECCTT-----SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS---SSEEEEEETTTTE
T ss_pred cEEEECCEEEEECCCCC-----CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee---CCEEEEEECCcCc
Confidence 67778899999988642 368999999999766555666666667778889999998643 3457899998765
Q ss_pred eEecCCCCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCceee-Cc--ccccccCCcccccceEEEEeCCeEEEEeC
Q 014222 290 WFPVYDGMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWSK-HI--DSKMHLGNSRALEAAALVPLNGKLCIIRN 366 (428)
Q Consensus 290 W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~-v~--~~~~~~~~~~~~~~~~~~~~~~~lyv~GG 366 (428)
-..--+.. ...-+.+.-+++||+..| .+.++++|+++.+-.. +. .-+.+... --.+...+++||+--.
T Consensus 97 ~~~ti~~~--~~Gwglt~dg~~L~vSdg--s~~l~~iDp~t~~~~~~I~V~~~g~~~~~-----lNeLe~~~G~lyanvw 167 (243)
T 3mbr_X 97 PRARFRYP--GEGWALTSDDSHLYMSDG--TAVIRKLDPDTLQQVGSIKVTAGGRPLDN-----LNELEWVNGELLANVW 167 (243)
T ss_dssp EEEEEECS--SCCCEEEECSSCEEEECS--SSEEEEECTTTCCEEEEEECEETTEECCC-----EEEEEEETTEEEEEET
T ss_pred EEEEEeCC--CCceEEeeCCCEEEEECC--CCeEEEEeCCCCeEEEEEEEccCCccccc-----ceeeEEeCCEEEEEEC
Confidence 43221112 222233445678999987 3589999999865332 21 11111111 1234456899996543
Q ss_pred CCeEEEEEeecCCC
Q 014222 367 NMSISLVDVSKSNG 380 (428)
Q Consensus 367 ~~~~~~v~~yd~~~ 380 (428)
. .+.|.+-|+.+
T Consensus 168 ~--s~~I~vIDp~t 179 (243)
T 3mbr_X 168 L--TSRIARIDPAS 179 (243)
T ss_dssp T--TTEEEEECTTT
T ss_pred C--CCeEEEEECCC
Confidence 2 33677788877
No 34
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.75 E-value=0.0081 Score=53.63 Aligned_cols=193 Identities=13% Similarity=-0.022 Sum_probs=110.1
Q ss_pred ccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEE
Q 014222 159 GFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVY 238 (428)
Q Consensus 159 ~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~y 238 (428)
-++++...++.+|+..|..+ .+.+.++|+.|++=...-+++......+.+..+++||+..-. .+.+.+|
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-------~~~v~vi 91 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-------KNIGFIY 91 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-------CSEEEEE
T ss_pred cccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-------CCEEEEE
Confidence 35777766348999877432 358999999999855433333333445677778999998653 2689999
Q ss_pred eCCCCceEEcCCCCCC-ccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeE-ecCC--CCcCC-CCCceEEECCeEE
Q 014222 239 DPNKNRWSFISDMSTA-MVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWF-PVYD--GMVAG-WRNPSASLNRHLY 313 (428)
Q Consensus 239 d~~t~~W~~~~~~p~~-~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~-~~~~--~~~~~-~~~~~~~~~~~ly 313 (428)
|+.+.+= +..++.+ ..+...+.-++++|+..| ...+..+|+++.+=. .+.- ...+. .-..+...+++||
T Consensus 92 D~~t~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g----s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~ly 165 (266)
T 2iwa_A 92 DRRTLSN--IKNFTHQMKDGWGLATDGKILYGSDG----TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVW 165 (266)
T ss_dssp ETTTTEE--EEEEECCSSSCCEEEECSSSEEEECS----SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEE
T ss_pred ECCCCcE--EEEEECCCCCeEEEEECCCEEEEECC----CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEE
Confidence 9987642 2222222 223333333567888753 235789999887633 2221 10110 1112334489999
Q ss_pred EEEccCCcEEEEEeCCCCc---eeeCcccccc---cCCc--ccccceEEEEeCCeEEEEeCCCe
Q 014222 314 ALDCKDGCKIRVYDEVTDS---WSKHIDSKMH---LGNS--RALEAAALVPLNGKLCIIRNNMS 369 (428)
Q Consensus 314 v~gG~~~~~i~~yd~~~~~---W~~v~~~~~~---~~~~--~~~~~~~~~~~~~~lyv~GG~~~ 369 (428)
+--.. .+.|.+-|+++.+ |-.++.+... .... ....+.+...-++++||.|+...
T Consensus 166 vn~~~-~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 166 ANIWQ-TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp EEETT-SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred EecCC-CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 76643 4689999999875 3333321100 0000 00012222333578999998654
No 35
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.70 E-value=0.0051 Score=54.77 Aligned_cols=230 Identities=10% Similarity=-0.012 Sum_probs=120.0
Q ss_pred CceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCC-CceeeCCCCCcCCcc
Q 014222 130 GKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSART-NKWHRAPDMLRRRHF 208 (428)
Q Consensus 130 ~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t-~~W~~~~~~~~~r~~ 208 (428)
....++++|+.+++...+..... ...+++...+++.+++++ + ..++++|..+ ++...+........-
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~-----~v~~~~~spdg~~l~~~~-~------~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE-----LFEAPNWSPDGKYLLLNS-E------GLLYRLSLAGDPSPEKVDTGFATICN 87 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS-----CCEEEEECTTSSEEEEEE-T------TEEEEEESSSCCSCEECCCTTCCCBC
T ss_pred cceeEEEEeCCCCceeeeccCCc-----ceEeeEECCCCCEEEEEc-C------CeEEEEeCCCCCCceEeccccccccc
Confidence 44678999999888765543221 123344433335555553 1 2799999998 776665433321111
Q ss_pred eeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE-ECCE-EEEEecCCCCceeEEEEeC
Q 014222 209 FGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV-YEGK-WFLKGLGSHRQVLSEAYQP 285 (428)
Q Consensus 209 ~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~g~-lyv~Gg~~~~~~~i~~yd~ 285 (428)
..++. -+++.+++++.. ......++.+|..+..-..+..... ...... -+++ |++.+.. .....++.+|.
T Consensus 88 ~~~~~spdg~~l~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~-~~~~~l~~~~~ 160 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKV---EFGKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIR-DQVFDIYSMDI 160 (297)
T ss_dssp SCCEECTTSSEEEEEECT---TTSSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEE-TTEEEEEEEET
T ss_pred cceEECCCCCEEEEEEeC---CCCcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECC-CCceEEEEEEC
Confidence 12222 355555555532 1124688899988777555543221 111222 2554 4434432 22345777788
Q ss_pred CCCCeEecCCCCcCCCCCceEE--ECCe-EEEEEccC-CcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeE
Q 014222 286 ETDSWFPVYDGMVAGWRNPSAS--LNRH-LYALDCKD-GCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKL 361 (428)
Q Consensus 286 ~~~~W~~~~~~~~~~~~~~~~~--~~~~-lyv~gG~~-~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~l 361 (428)
.+.....+..... . ...+. -+++ |++.+..+ ...+|.++........+...... ........+++.
T Consensus 161 ~~~~~~~~~~~~~-~--~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~~s~dg~~ 230 (297)
T 2ojh_A 161 DSGVETRLTHGEG-R--NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYG-------DWFPHPSPSGDK 230 (297)
T ss_dssp TTCCEEECCCSSS-C--EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEE-------EEEEEECTTSSE
T ss_pred CCCcceEcccCCC-c--cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcc-------cCCeEECCCCCE
Confidence 7777766643211 1 11222 2555 44444323 34788888777776665432111 112233345555
Q ss_pred EEEeCCC---------eEEEEEeecCCCCCCCccccccceecc
Q 014222 362 CIIRNNM---------SISLVDVSKSNGERGASAEHLWETISG 395 (428)
Q Consensus 362 yv~GG~~---------~~~~v~~yd~~~~~~~~~~~~W~~~~~ 395 (428)
+++++.. ....+.+||..+ .....+..
T Consensus 231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~-------~~~~~~~~ 266 (297)
T 2ojh_A 231 VVFVSYDADVFDHPRDLDVRVQLMDMDG-------GNVETLFD 266 (297)
T ss_dssp EEEEEEETTCCSCCSSEEEEEEEEETTS-------CSCEEEEE
T ss_pred EEEEEcCCCCCcccccCceEEEEEecCC-------CCceeeec
Confidence 5444432 446799999988 66555443
No 36
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.68 E-value=0.0078 Score=57.63 Aligned_cols=220 Identities=10% Similarity=-0.017 Sum_probs=118.3
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceee
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGS 211 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~ 211 (428)
..++++|.....-..+..... ...+.+...+++.+++++.+. ....++++|..+++...+...+. .....
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~-----~v~~~~~Spdg~~la~~s~~~---~~~~i~~~d~~tg~~~~l~~~~~--~~~~~ 228 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ-----PLMSPAWSPDGSKLAYVTFES---GRSALVIQTLANGAVRQVASFPR--HNGAP 228 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS-----CEEEEEECTTSSEEEEEECTT---SSCEEEEEETTTCCEEEEECCSS--CEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCC-----cceeeEEcCCCCEEEEEEecC---CCcEEEEEECCCCcEEEeecCCC--cccCE
Confidence 688999987655443322111 122333332324555555432 23589999999988766543321 11122
Q ss_pred EEE-CCE-EEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCC
Q 014222 212 CVI-NNC-LYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPET 287 (428)
Q Consensus 212 ~~~-~~~-iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~ 287 (428)
+.- +++ |++.+..+ ....++.+|..+.+...+..... ....... +|+..+++........++.+|..+
T Consensus 229 ~~spdg~~la~~~~~~-----g~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 229 AFSPDGSKLAFALSKT-----GSLNLYVMDLASGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp EECTTSSEEEEEECTT-----SSCEEEEEETTTCCEEECCCCSS---CEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred EEcCCCCEEEEEEecC-----CCceEEEEECCCCCEEeCcCCCC---cccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 222 454 55454432 12579999999887766654321 1122222 666444444333344688999988
Q ss_pred CCeEecCCCCcCCCCCceEE--ECCeEEEEEccC--CcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEE
Q 014222 288 DSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKD--GCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCI 363 (428)
Q Consensus 288 ~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~--~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv 363 (428)
.+-..+... ......+. -+++..++++.. ...|+++|.++.+...+.... . ........+++.++
T Consensus 301 ~~~~~l~~~---~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~----~----~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 301 GAPQRITWE---GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF----L----DETPSLAPNGTMVI 369 (415)
T ss_dssp SCCEECCCS---SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS----S----CEEEEECTTSSEEE
T ss_pred CCEEEEecC---CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC----C----cCCeEEcCCCCEEE
Confidence 775554321 11111222 256544444432 257999999998877654321 1 12334445666555
Q ss_pred EeC-CCeEEEEEeecCCC
Q 014222 364 IRN-NMSISLVDVSKSNG 380 (428)
Q Consensus 364 ~GG-~~~~~~v~~yd~~~ 380 (428)
+++ ......++++|..+
T Consensus 370 ~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp EEEEETTEEEEEEEETTS
T ss_pred EEEcCCCccEEEEEECCC
Confidence 554 33455789999887
No 37
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.66 E-value=0.029 Score=50.12 Aligned_cols=233 Identities=11% Similarity=0.050 Sum_probs=118.1
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCC-ccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCc
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEY-SEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNK 195 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~-~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 195 (428)
++.+|+.... ...+.+||+.......+....... ....-.++++. .++++|+.+... ...+.+||+....
T Consensus 40 ~g~l~v~~~~---~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-----~~~i~~~d~~g~~ 111 (286)
T 1q7f_A 40 QNDIIVADTN---NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-----THQIQIYNQYGQF 111 (286)
T ss_dssp TCCEEEEEGG---GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-----GCEEEEECTTSCE
T ss_pred CCCEEEEECC---CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-----CCEEEEECCCCcE
Confidence 3556776422 236888998855444443211100 00122355553 344899886321 2368899965443
Q ss_pred eeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEec
Q 014222 196 WHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGL 272 (428)
Q Consensus 196 W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg 272 (428)
-..+..... ..-.++++ -++++|+..... ..+.+||+.......+..... ........+ +|++|+...
T Consensus 112 ~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~-------~~i~~~~~~g~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 112 VRKFGATIL-QHPRGVTVDNKGRIIVVECKV-------MRVIIFDQNGNVLHKFGCSKH-LEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp EEEECTTTC-SCEEEEEECTTSCEEEEETTT-------TEEEEECTTSCEEEEEECTTT-CSSEEEEEECSSSEEEEEEG
T ss_pred EEEecCccC-CCceEEEEeCCCCEEEEECCC-------CEEEEEcCCCCEEEEeCCCCc-cCCcEEEEECCCCCEEEEEC
Confidence 333322111 11122333 257888875432 578999987665444432111 111222223 689998754
Q ss_pred CCCCceeEEEEeCCCCCeEecCCCCcCCCCCc-eEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccc
Q 014222 273 GSHRQVLSEAYQPETDSWFPVYDGMVAGWRNP-SASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRAL 349 (428)
Q Consensus 273 ~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~ 349 (428)
. ...+.+||+.......+.. . .....+ .+.+ +|.||+....++..|.+||++.+.-..+.. ......+
T Consensus 183 ~---~~~i~~~~~~g~~~~~~~~-~-g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~-~~~~~~~--- 253 (286)
T 1q7f_A 183 R---AHCVKVFNYEGQYLRQIGG-E-GITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALES-KVKHAQC--- 253 (286)
T ss_dssp G---GTEEEEEETTCCEEEEESC-T-TTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEE-SSCCSCE---
T ss_pred C---CCEEEEEcCCCCEEEEEcc-C-CccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcc-cCCCCcc---
Confidence 2 2347899986654444432 1 111112 2333 678999876543489999987654433322 1111111
Q ss_pred cceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 350 EAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 350 ~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
...++..+++||+... . ..+.+|+...
T Consensus 254 -~~i~~~~~g~l~vs~~-~--~~v~v~~~~~ 280 (286)
T 1q7f_A 254 -FDVALMDDGSVVLASK-D--YRLYIYRYVQ 280 (286)
T ss_dssp -EEEEEETTTEEEEEET-T--TEEEEEECSC
T ss_pred -eeEEECCCCcEEEECC-C--CeEEEEEccc
Confidence 1233445789999854 3 2455665543
No 38
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.63 E-value=0.014 Score=53.81 Aligned_cols=232 Identities=11% Similarity=0.018 Sum_probs=117.7
Q ss_pred cceEEEEeeCCC---CceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCC
Q 014222 118 EEWIYVIKRDRE---GKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSART 193 (428)
Q Consensus 118 ~~~l~v~gg~~~---~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t 193 (428)
++.+|+....+. ....+.++|+.+++....-+... . ..+++.. ++..+|+.++. ...+.++|+.+
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~-~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~ 120 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL----K-PFGATINNTTQTLWFGNTV------NSAVTAIDAKT 120 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS----C-CCSEEEETTTTEEEEEETT------TTEEEEEETTT
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC----C-cceEEECCCCCEEEEEecC------CCEEEEEeCCC
Confidence 457777764322 14579999998876433222211 1 2334443 44358877543 23799999988
Q ss_pred CceeeCCCCCcC--------CcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE
Q 014222 194 NKWHRAPDMLRR--------RHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY 263 (428)
Q Consensus 194 ~~W~~~~~~~~~--------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~ 263 (428)
++-...-+.... ..-..++.- ++.+|+.+... ...+.+||+.+.+-...-+.........+..-
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK------ESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS------SCEEEEEETTTTEEEEEECCCCTTCCCCEEET
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC------CceEEEEcCCCCceEEEecCCCCccceEEECC
Confidence 864322111111 111223332 45677776322 25799999987754332221111111122222
Q ss_pred C-CEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcC-CCCCc--eEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCc
Q 014222 264 E-GKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVA-GWRNP--SASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHI 337 (428)
Q Consensus 264 ~-g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~-~~~~~--~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~ 337 (428)
+ +.+|+... ...+..||+.+.+-......... ..... .+.. ++.||+... ....+++||+++.+....-
T Consensus 195 dg~~l~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 195 EGKRLYTTNA----DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS-KAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp TTTEEEEECT----TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES-SSSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEcC----CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC-CCCEEEEEECCCCcEEEEE
Confidence 4 45676543 22467899988754322111111 11111 2222 345776654 3458999999887654332
Q ss_pred ccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 338 DSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
..+. . .+.+....++.+|+.+.... .+.+||..+
T Consensus 270 ~~~~----~---~~~~~s~dg~~l~v~~~~~~--~v~~~d~~~ 303 (353)
T 3vgz_A 270 AAPE----S---LAVLFNPARNEAYVTHRQAG--KVSVIDAKS 303 (353)
T ss_dssp ECSS----C---CCEEEETTTTEEEEEETTTT--EEEEEETTT
T ss_pred EcCC----C---ceEEECCCCCEEEEEECCCC--eEEEEECCC
Confidence 2211 1 12233333455888765432 477888876
No 39
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.62 E-value=0.0017 Score=61.14 Aligned_cols=223 Identities=13% Similarity=0.098 Sum_probs=113.5
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCce
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKW 196 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 196 (428)
+..||+.++. ...+.++|..+++....-.... .-.+++.. ++..||+.+.. ...+.+||..+++.
T Consensus 43 g~~l~~~~~~---d~~i~v~d~~~~~~~~~~~~~~-----~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 43 GTKVYVANAH---SNDVSIIDTATNNVIATVPAGS-----SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTV 108 (391)
T ss_dssp SSEEEEEEGG---GTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEE
T ss_pred CCEEEEECCC---CCeEEEEECCCCeEEEEEECCC-----CccceEECCCCCEEEEEECC------CCEEEEEECCCCeE
Confidence 4566666532 2378889998877543222221 12334443 34356665432 24799999998865
Q ss_pred eeCCCCCcCCcceeeEEE-C-CEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE-CC-EEEEEec
Q 014222 197 HRAPDMLRRRHFFGSCVI-N-NCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY-EG-KWFLKGL 272 (428)
Q Consensus 197 ~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~g-~lyv~Gg 272 (428)
...-.. ......++.. + ..+|+.++.+ ..+.+||..+.+....-..... ...++.. ++ .+|+.++
T Consensus 109 ~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~dg~~l~~~~~ 177 (391)
T 1l0q_A 109 AGTVKT--GKSPLGLALSPDGKKLYVTNNGD-------KTVSVINTVTKAVINTVSVGRS--PKGIAVTPDGTKVYVANF 177 (391)
T ss_dssp EEEEEC--SSSEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEECCSS--EEEEEECTTSSEEEEEET
T ss_pred EEEEeC--CCCcceEEECCCCCEEEEEeCCC-------CEEEEEECCCCcEEEEEecCCC--cceEEECCCCCEEEEEeC
Confidence 433221 1112233332 3 3577776543 5899999988865443222111 1222222 34 5667654
Q ss_pred CCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCe-EEEEEcc-CCcEEEEEeCCCCceeeCcccccccCCccc
Q 014222 273 GSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRH-LYALDCK-DGCKIRVYDEVTDSWSKHIDSKMHLGNSRA 348 (428)
Q Consensus 273 ~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~-lyv~gG~-~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~ 348 (428)
.. ..+..||+.+++-....... .....+.+ +++ ||+.+.. ....|.+||+.+.+-.. .++... ..
T Consensus 178 ~~---~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~--~~~~~~-~~-- 246 (391)
T 1l0q_A 178 DS---MSISVIDTVTNSVIDTVKVE---AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITA--RIPVGP-DP-- 246 (391)
T ss_dssp TT---TEEEEEETTTTEEEEEEECS---SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEE--EEECCS-SE--
T ss_pred CC---CEEEEEECCCCeEEEEEecC---CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEE--EEecCC-Cc--
Confidence 32 24789999887644332211 11112222 444 5554421 33589999998764322 222111 11
Q ss_pred ccceEEEEe-CCeEEEEeCCCeEEEEEeecCCC
Q 014222 349 LEAAALVPL-NGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 349 ~~~~~~~~~-~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
....... +..||+.++... .+.+||..+
T Consensus 247 --~~~~~s~dg~~l~~s~~~d~--~v~v~d~~~ 275 (391)
T 1l0q_A 247 --AGIAVTPDGKKVYVALSFXN--TVSVIDTAT 275 (391)
T ss_dssp --EEEEECTTSSEEEEEETTTT--EEEEEETTT
T ss_pred --cEEEEccCCCEEEEEcCCCC--EEEEEECCC
Confidence 1122233 345777766543 466788776
No 40
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.60 E-value=0.0034 Score=60.00 Aligned_cols=217 Identities=12% Similarity=0.008 Sum_probs=112.8
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCC---cCCcc
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDML---RRRHF 208 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~---~~r~~ 208 (428)
..++.+|+.++++..+..++.. ....+++...++.+++.++.+ ..+.+||..+++........ .....
T Consensus 101 ~~l~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 171 (433)
T 3bws_A 101 EKLIALDKEGITHRFISRFKTG---FQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQTVRLSPPEKYKKKLGF 171 (433)
T ss_dssp TCEEECCBTTCSEEEEEEEECS---SCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCCEEEECCCHHHHTTCCE
T ss_pred eEEEEECCCCCcceEEEEEcCC---CCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCeEeeecCcccccccCCc
Confidence 3678888877766555443322 112233443344777776543 25899999988766543321 11111
Q ss_pred eeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEe
Q 014222 209 FGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQ 284 (428)
Q Consensus 209 ~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd 284 (428)
...+.+ ++++|+.++.+ ..+.+||..+.+-...-... ......++.. +..+|+.+... ..+..||
T Consensus 172 v~~~~~~~~~~~~~s~~~d-------~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~---~~i~~~d 240 (433)
T 3bws_A 172 VETISIPEHNELWVSQMQA-------NAVHVFDLKTLAYKATVDLT-GKWSKILLYDPIRDLVYCSNWIS---EDISVID 240 (433)
T ss_dssp EEEEEEGGGTEEEEEEGGG-------TEEEEEETTTCCEEEEEECS-SSSEEEEEEETTTTEEEEEETTT---TEEEEEE
T ss_pred eeEEEEcCCCEEEEEECCC-------CEEEEEECCCceEEEEEcCC-CCCeeEEEEcCCCCEEEEEecCC---CcEEEEE
Confidence 222233 67888888764 58999999876543221111 1111222222 34566766432 2578999
Q ss_pred CCCCCeEecCCCCcCCCCCceEEE--CCeEEEEEcc-------CCcEEEEEeCCCCceeeCcccccccCCcccccceEEE
Q 014222 285 PETDSWFPVYDGMVAGWRNPSASL--NRHLYALDCK-------DGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALV 355 (428)
Q Consensus 285 ~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~-------~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~ 355 (428)
+.+.+....... ......+.+ +++.+++++. ....|.+||+.+.+-......+. .. .....
T Consensus 241 ~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~---~~----~~~~~ 310 (433)
T 3bws_A 241 RKTKLEIRKTDK---IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG---NK----RHIVS 310 (433)
T ss_dssp TTTTEEEEECCC---CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE---CE----EEEEE
T ss_pred CCCCcEEEEecC---CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC---Cc----ceEEE
Confidence 988765433221 111112222 4544444432 23479999998775433321111 11 12222
Q ss_pred EeC-CeEEEEeCCCeEEEEEeecCCC
Q 014222 356 PLN-GKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 356 ~~~-~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
..+ +.||+.++... .+.+||..+
T Consensus 311 ~~~g~~l~~~~~~~~--~v~v~d~~~ 334 (433)
T 3bws_A 311 GNTENKIYVSDMCCS--KIEVYDLKE 334 (433)
T ss_dssp CSSTTEEEEEETTTT--EEEEEETTT
T ss_pred CCCCCEEEEEecCCC--EEEEEECCC
Confidence 333 46888766543 466788766
No 41
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.56 E-value=0.0028 Score=56.21 Aligned_cols=155 Identities=12% Similarity=-0.031 Sum_probs=95.0
Q ss_pred eeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCC
Q 014222 210 GSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDS 289 (428)
Q Consensus 210 ~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~ 289 (428)
+....++.||+..|... .+.+.++|+.|.+=..--+++....+...+..+++||+.... ...+.+||+++.+
T Consensus 47 GL~~~~~~LyestG~~g-----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~---~~~v~v~D~~t~~ 118 (262)
T 3nol_A 47 GFFYRNGYFYESTGLNG-----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK---NGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEETTEEEEEEEETT-----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS---SSEEEEEETTTCC
T ss_pred eEEEECCEEEEECCCCC-----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee---CCEEEEEECccCc
Confidence 45556899999988642 258899999998765444555555556677889999998643 3357899998876
Q ss_pred eEecCCCCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCe
Q 014222 290 WFPVYDGMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMS 369 (428)
Q Consensus 290 W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~ 369 (428)
-..--+... ..-+.+.-+++||+..| .+.++.+|+++.+-..--.... .++... .--.+...+++||+--- .
T Consensus 119 ~~~ti~~~~--eG~glt~dg~~L~~SdG--s~~i~~iDp~T~~v~~~I~V~~-~g~~~~-~lNELe~~~G~lyan~w--~ 190 (262)
T 3nol_A 119 QVRSFNYDG--EGWGLTHNDQYLIMSDG--TPVLRFLDPESLTPVRTITVTA-HGEELP-ELNELEWVDGEIFANVW--Q 190 (262)
T ss_dssp EEEEEECSS--CCCCEEECSSCEEECCS--SSEEEEECTTTCSEEEEEECEE-TTEECC-CEEEEEEETTEEEEEET--T
T ss_pred EEEEEECCC--CceEEecCCCEEEEECC--CCeEEEEcCCCCeEEEEEEecc-CCcccc-ccceeEEECCEEEEEEc--c
Confidence 443211122 22234444677888877 3589999999865332111110 011100 00123445889997532 2
Q ss_pred EEEEEeecCCC
Q 014222 370 ISLVDVSKSNG 380 (428)
Q Consensus 370 ~~~v~~yd~~~ 380 (428)
.+.|.+-|+.+
T Consensus 191 ~~~I~vIDp~t 201 (262)
T 3nol_A 191 TNKIVRIDPET 201 (262)
T ss_dssp SSEEEEECTTT
T ss_pred CCeEEEEECCC
Confidence 34677888877
No 42
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.52 E-value=0.046 Score=48.78 Aligned_cols=224 Identities=5% Similarity=-0.051 Sum_probs=115.4
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
++.+|+.... ...+..||+. ++...+. ++.. ...-.+++...++.+|+.... ...+.+||+ +++..
T Consensus 67 ~g~l~v~~~~---~~~i~~~~~~-g~~~~~~-~~~~--~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 67 DGEVWFTENA---ANKIGRITKK-GIIKEYT-LPNP--DSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKIR 132 (299)
T ss_dssp TSCEEEEETT---TTEEEEECTT-SCEEEEE-CSST--TCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEE
T ss_pred CCCEEEeCCC---CCeEEEECCC-CcEEEEe-CCCc--CCCceeeEECCCCCEEEEecC------CceEEEECC-CCCEE
Confidence 4556666421 2368889986 4554432 1111 122345555543478887432 236889998 66555
Q ss_pred eCCCCCcCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCC
Q 014222 198 RAPDMLRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGS 274 (428)
Q Consensus 198 ~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~ 274 (428)
..........-.+++.. ++++|+.... ...+.+||+ +.+...+.. +..........+ +|.||+....
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~- 202 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNALWFTENQ-------NNAIGRITE-SGDITEFKI-PTPASGPVGITKGNDDALWFVEII- 202 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETT-------TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSSEEEEETT-
T ss_pred EecCCCCCCCCceEEEcCCCCEEEEeCC-------CCEEEEEcC-CCcEEEeeC-CCCCCcceeEEECCCCCEEEEccC-
Confidence 43211111112233333 5688886432 257899999 776665421 111112222223 5788887532
Q ss_pred CCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccce
Q 014222 275 HRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAA 352 (428)
Q Consensus 275 ~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~ 352 (428)
...+.+||+ +++...+.. +........+.. +|.||+.... ...|.+||+. .+...+.. +...... .
T Consensus 203 --~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~-~~~i~~~d~~-g~~~~~~~-~~~~~~~-----~ 270 (299)
T 2z2n_A 203 --GNKIGRITT-SGEITEFKI-PTPNARPHAITAGAGIDLWFTEWG-ANKIGRLTSN-NIIEEYPI-QIKSAEP-----H 270 (299)
T ss_dssp --TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECSTTCEEEEETT-TTEEEEEETT-TEEEEEEC-SSSSCCE-----E
T ss_pred --CceEEEECC-CCcEEEEEC-CCCCCCceeEEECCCCCEEEeccC-CceEEEECCC-CceEEEeC-CCCCCcc-----c
Confidence 224789999 777765432 111111112333 5788887632 3589999994 44443321 1111111 2
Q ss_pred EEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 353 ALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 353 ~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+++..++.||+..... .+..||+.+
T Consensus 271 ~i~~~~g~l~v~~~~~---~l~~~~~~~ 295 (299)
T 2z2n_A 271 GICFDGETIWFAMECD---KIGKLTLIK 295 (299)
T ss_dssp EEEECSSCEEEEETTT---EEEEEEEC-
T ss_pred eEEecCCCEEEEecCC---cEEEEEcCc
Confidence 2223778899876433 356777766
No 43
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.51 E-value=0.0032 Score=60.24 Aligned_cols=193 Identities=11% Similarity=0.032 Sum_probs=99.1
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCC-CccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCce
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKE-YSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKW 196 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~-~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 196 (428)
++.+++.++.. ..+.+||+.+++.....+.... .....-.+++...++.+++.++.+ ..+.+||..+.+.
T Consensus 133 ~~~~~~~~~~~---~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~ 203 (433)
T 3bws_A 133 NTRLAIPLLED---EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAY 203 (433)
T ss_dssp SSEEEEEBTTS---SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCE
T ss_pred CCeEEEEeCCC---CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceE
Confidence 55666665322 3588999998876553322110 000112233433344788887643 3689999987654
Q ss_pred eeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE-CC-EEEEEec
Q 014222 197 HRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY-EG-KWFLKGL 272 (428)
Q Consensus 197 ~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~g-~lyv~Gg 272 (428)
...-.... ..-..++.. +..+|+.++.+ ..+.+||+.+.+....-... .....++.. ++ .+++.+.
T Consensus 204 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 204 KATVDLTG-KWSKILLYDPIRDLVYCSNWIS-------EDISVIDRKTKLEIRKTDKI--GLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EEEEECSS-SSEEEEEEETTTTEEEEEETTT-------TEEEEEETTTTEEEEECCCC--SEEEEEEECTTSSEEEEEEE
T ss_pred EEEEcCCC-CCeeEEEEcCCCCEEEEEecCC-------CcEEEEECCCCcEEEEecCC--CCceEEEEcCCCCEEEEEEC
Confidence 32211111 111122222 34677766543 47999999887654332221 111222222 45 4555442
Q ss_pred CCC----CceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CC-eEEEEEccCCcEEEEEeCCCCce
Q 014222 273 GSH----RQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NR-HLYALDCKDGCKIRVYDEVTDSW 333 (428)
Q Consensus 273 ~~~----~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~lyv~gG~~~~~i~~yd~~~~~W 333 (428)
... ....+..||+.+.+-........ ....+.+ ++ .+|+.++.+ ..+.+||..+.+-
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g~~l~~~~~~~-~~v~v~d~~~~~~ 337 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGPPG---NKRHIVSGNTENKIYVSDMCC-SKIEVYDLKEKKV 337 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEEEE---CEEEEEECSSTTEEEEEETTT-TEEEEEETTTTEE
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccCCC---CcceEEECCCCCEEEEEecCC-CEEEEEECCCCcE
Confidence 221 13358899998775433321111 1112222 34 677777655 4899999987643
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.50 E-value=0.011 Score=53.98 Aligned_cols=218 Identities=8% Similarity=-0.004 Sum_probs=108.0
Q ss_pred eeEEEEeCCCCceEe-CCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCccee
Q 014222 132 ISWHAFDPIYQLWQP-LPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFG 210 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~-l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~ 210 (428)
..+.+||..++.... +..+........-.+++...+++.++.|+.+ ..+.+||..+++......+........
T Consensus 72 g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~i~ 145 (337)
T 1gxr_A 72 GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA------STLSIWDLAAPTPRIKAELTSSAPACY 145 (337)
T ss_dssp SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS------SEEEEEECCCC--EEEEEEECSSSCEE
T ss_pred CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC------CcEEEEECCCCCcceeeecccCCCceE
Confidence 367888887654211 1110000001112233333333566666643 368899998877544333222222222
Q ss_pred -eEEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCC
Q 014222 211 -SCVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPE 286 (428)
Q Consensus 211 -~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~ 286 (428)
++.. +++.++.|+.+ ..+.+||..+.+....-..... ....... ++..++.++.. ..+..||..
T Consensus 146 ~~~~~~~~~~l~~~~~d-------g~v~~~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d---g~i~~~d~~ 213 (337)
T 1gxr_A 146 ALAISPDSKVCFSCCSD-------GNIAVWDLHNQTLVRQFQGHTD--GASCIDISNDGTKLWTGGLD---NTVRSWDLR 213 (337)
T ss_dssp EEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEETT---SEEEEEETT
T ss_pred EEEECCCCCEEEEEeCC-------CcEEEEeCCCCceeeeeecccC--ceEEEEECCCCCEEEEEecC---CcEEEEECC
Confidence 2222 55666666653 4689999988754332211111 1222222 56666665532 247789987
Q ss_pred CCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEE
Q 014222 287 TDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCII 364 (428)
Q Consensus 287 ~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~ 364 (428)
+.+-....... . ....+. -++.++++|+.++ .+.+||..+..-..+.. .... ........++++++.
T Consensus 214 ~~~~~~~~~~~-~--~v~~~~~s~~~~~l~~~~~~~-~i~~~~~~~~~~~~~~~---~~~~----v~~~~~~~~~~~l~~ 282 (337)
T 1gxr_A 214 EGRQLQQHDFT-S--QIFSLGYCPTGEWLAVGMESS-NVEVLHVNKPDKYQLHL---HESC----VLSLKFAYCGKWFVS 282 (337)
T ss_dssp TTEEEEEEECS-S--CEEEEEECTTSSEEEEEETTS-CEEEEETTSSCEEEECC---CSSC----EEEEEECTTSSEEEE
T ss_pred CCceEeeecCC-C--ceEEEEECCCCCEEEEEcCCC-cEEEEECCCCCeEEEcC---Cccc----eeEEEECCCCCEEEE
Confidence 76533221111 1 111222 3667777776554 79999998765332211 1111 112233445777777
Q ss_pred eCCCeEEEEEeecCCC
Q 014222 365 RNNMSISLVDVSKSNG 380 (428)
Q Consensus 365 GG~~~~~~v~~yd~~~ 380 (428)
++.++ .+.+||..+
T Consensus 283 ~~~dg--~i~~~~~~~ 296 (337)
T 1gxr_A 283 TGKDN--LLNAWRTPY 296 (337)
T ss_dssp EETTS--EEEEEETTT
T ss_pred ecCCC--cEEEEECCC
Confidence 77654 466788776
No 45
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.49 E-value=0.05 Score=48.56 Aligned_cols=224 Identities=6% Similarity=-0.035 Sum_probs=116.1
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
++.+|+... ....+..||+. ++.......... ..-++++...++.+|+.... ...+++||+. ++.+
T Consensus 25 ~g~l~v~~~---~~~~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~ 90 (299)
T 2z2n_A 25 KGKVWITQH---KANMISCINLD-GKITEYPLPTPD---AKVMCLTISSDGEVWFTENA------ANKIGRITKK-GIIK 90 (299)
T ss_dssp TSCEEEEET---TTTEEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSCEEEEETT------TTEEEEECTT-SCEE
T ss_pred CCCEEEEec---CCCcEEEEcCC-CCeEEecCCccc---CceeeEEECCCCCEEEeCCC------CCeEEEECCC-CcEE
Confidence 455666542 12368899998 776654321111 22344555444468887432 2368899986 4444
Q ss_pred eCCCCC-cCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE-ECCEEEEEecCC
Q 014222 198 RAPDML-RRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV-YEGKWFLKGLGS 274 (428)
Q Consensus 198 ~~~~~~-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~g~lyv~Gg~~ 274 (428)
... ++ ....-.+++.. ++.+|+..... ..+.+||+ +.+................+. -+|.+|+....
T Consensus 91 ~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~-------~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~- 160 (299)
T 2z2n_A 91 EYT-LPNPDSAPYGITEGPNGDIWFTEMNG-------NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ- 160 (299)
T ss_dssp EEE-CSSTTCCEEEEEECTTSCEEEEETTT-------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT-
T ss_pred EEe-CCCcCCCceeeEECCCCCEEEEecCC-------ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC-
Confidence 332 11 11122233333 57888865432 57889998 655554422111111222222 26789986532
Q ss_pred CCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccce
Q 014222 275 HRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAA 352 (428)
Q Consensus 275 ~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~ 352 (428)
...+.+||+ +++...+.. +..........+ ++.||+.... ...+.+||+ +.+...+.. +...... .
T Consensus 161 --~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~-~~~i~~~~~-~g~~~~~~~-~~~~~~~-----~ 228 (299)
T 2z2n_A 161 --NNAIGRITE-SGDITEFKI-PTPASGPVGITKGNDDALWFVEII-GNKIGRITT-SGEITEFKI-PTPNARP-----H 228 (299)
T ss_dssp --TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSSEEEEETT-TTEEEEECT-TCCEEEEEC-SSTTCCE-----E
T ss_pred --CCEEEEEcC-CCcEEEeeC-CCCCCcceeEEECCCCCEEEEccC-CceEEEECC-CCcEEEEEC-CCCCCCc-----e
Confidence 224789999 777765421 111111112233 5789887643 348999999 666665421 1111111 2
Q ss_pred EE-EEeCCeEEEEeCCCeEEEEEeecCC
Q 014222 353 AL-VPLNGKLCIIRNNMSISLVDVSKSN 379 (428)
Q Consensus 353 ~~-~~~~~~lyv~GG~~~~~~v~~yd~~ 379 (428)
++ ...++.||+..... ..+.+||+.
T Consensus 229 ~i~~~~~g~l~v~~~~~--~~i~~~d~~ 254 (299)
T 2z2n_A 229 AITAGAGIDLWFTEWGA--NKIGRLTSN 254 (299)
T ss_dssp EEEECSTTCEEEEETTT--TEEEEEETT
T ss_pred eEEECCCCCEEEeccCC--ceEEEECCC
Confidence 33 33467888875321 236677873
No 46
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.46 E-value=0.054 Score=48.37 Aligned_cols=224 Identities=8% Similarity=-0.024 Sum_probs=117.3
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
++.||+... ....+..||+. ++...+.. +.. ...-.+++...++.+|+... ....+.+||+. +++.
T Consensus 30 ~g~l~v~~~---~~~~v~~~~~~-~~~~~~~~-~~~--~~~~~~i~~~~~g~l~v~~~------~~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 30 DGKVWFTQH---KANKISSLDQS-GRIKEFEV-PTP--DAKVMCLIVSSLGDIWFTEN------GANKIGKLSKK-GGFT 95 (300)
T ss_dssp TSCEEEEET---TTTEEEEECTT-SCEEEEEC-SST--TCCEEEEEECTTSCEEEEET------TTTEEEEECTT-SCEE
T ss_pred CCCEEEEcC---CCCeEEEECCC-CceEEEEC-CCC--CCcceeEEECCCCCEEEEec------CCCeEEEECCC-CCeE
Confidence 456777652 22468889998 66655321 111 11234455544446888642 12468999988 6665
Q ss_pred eCCCCCcCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCC
Q 014222 198 RAPDMLRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGS 274 (428)
Q Consensus 198 ~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~ 274 (428)
..........-.++++. ++++|+..... ..+.+||+. .+..... ++..........+ +|++|+....
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-------~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~- 165 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLNG-------DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ- 165 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTT-------TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT-
T ss_pred EecCCCCCCCCccceECCCCCEEEEccCC-------CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC-
Confidence 43211111222233333 57888865321 478899987 5554432 1211112222223 6788887532
Q ss_pred CCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccce
Q 014222 275 HRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAA 352 (428)
Q Consensus 275 ~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~ 352 (428)
...+.+||+ +++...+.. +........+.+ ++.||+.... +..|.+||+ +.++..... +.....+ .
T Consensus 166 --~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~-~~~i~~~~~-~g~~~~~~~-~~~~~~~-----~ 233 (300)
T 2qc5_A 166 --NNSIGRITN-TGKLEEYPL-PTNAAAPVGITSGNDGALWFVEIM-GNKIGRITT-TGEISEYDI-PTPNARP-----H 233 (300)
T ss_dssp --TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSSEEEEETT-TTEEEEECT-TCCEEEEEC-SSTTCCE-----E
T ss_pred --CCeEEEECC-CCcEEEeeC-CCCCCCcceEEECCCCCEEEEccC-CCEEEEEcC-CCcEEEEEC-CCCCCCc-----e
Confidence 224789998 666665432 111111122333 5789987643 347999999 555554321 1111111 2
Q ss_pred EE-EEeCCeEEEEeCCCeEEEEEeecCC
Q 014222 353 AL-VPLNGKLCIIRNNMSISLVDVSKSN 379 (428)
Q Consensus 353 ~~-~~~~~~lyv~GG~~~~~~v~~yd~~ 379 (428)
++ +.-+++||+..... ..+..||+.
T Consensus 234 ~i~~d~~g~l~v~~~~~--~~i~~~~~~ 259 (300)
T 2qc5_A 234 AITAGKNSEIWFTEWGA--NQIGRITND 259 (300)
T ss_dssp EEEECSTTCEEEEETTT--TEEEEECTT
T ss_pred EEEECCCCCEEEeccCC--CeEEEECCC
Confidence 23 33357899876321 246678873
No 47
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.45 E-value=0.0046 Score=56.68 Aligned_cols=244 Identities=11% Similarity=-0.033 Sum_probs=114.7
Q ss_pred cceEEEEeeCCCCceeEEEEeCC--CCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPI--YQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTN 194 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~--~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 194 (428)
+..||+.+.+ + ..+.+||.. ++++..+..++.. ..-..++.. ++..+|+.+.. ...+.+||...+
T Consensus 49 g~~l~~~~~~-~--~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~ 116 (343)
T 1ri6_A 49 KRYLYVGVRP-E--FRVLAYRIAPDDGALTFAAESALP---GSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDG 116 (343)
T ss_dssp SSEEEEEETT-T--TEEEEEEECTTTCCEEEEEEEECS---SCCSEEEECTTSSEEEEEETT------TTEEEEEEEETT
T ss_pred CCEEEEeecC-C--CeEEEEEecCCCCceeeccccccC---CCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCC
Confidence 4556666532 2 245555554 7777655443322 112334443 34346655431 235778887322
Q ss_pred c-eeeCCCCCcCCcceeeEEE-C-CEEEEEccccCCCCCCCCeEEEEeCCC-CceEEcC----CCCCCccceEEEEE--C
Q 014222 195 K-WHRAPDMLRRRHFFGSCVI-N-NCLYVAGGENGGVHRSLRSAEVYDPNK-NRWSFIS----DMSTAMVPFIGVVY--E 264 (428)
Q Consensus 195 ~-W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~v~~yd~~t-~~W~~~~----~~p~~~~~~~~~~~--~ 264 (428)
. ...+........-..++.. + ..+|+.+..+ ..+.+||..+ .+...+. ..+... ....+.+ +
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pd 188 (343)
T 1ri6_A 117 LPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ-------DRICLFTVSDDGHLVAQDPAEVTTVEGA-GPRHMVFHPN 188 (343)
T ss_dssp EEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG-------TEEEEEEECTTSCEEEEEEEEEECSTTC-CEEEEEECTT
T ss_pred ccccccccccCCCCceEEEECCCCCEEEEecCCC-------CEEEEEEecCCCceeeecccccccCCCC-CcceEEECCC
Confidence 1 1222111111112223332 3 3677765332 4789999887 6554322 111111 1112222 4
Q ss_pred C-EEEEEecCCCCceeEEEEeCC--CCCeEec---CCCCcC--CCCCc-eEEE--CC-eEEEEEccCCcEEEEEeCC--C
Q 014222 265 G-KWFLKGLGSHRQVLSEAYQPE--TDSWFPV---YDGMVA--GWRNP-SASL--NR-HLYALDCKDGCKIRVYDEV--T 330 (428)
Q Consensus 265 g-~lyv~Gg~~~~~~~i~~yd~~--~~~W~~~---~~~~~~--~~~~~-~~~~--~~-~lyv~gG~~~~~i~~yd~~--~ 330 (428)
+ .+|+.+... ..+..||.. +.+++.. ...+.. ..... .+.+ ++ .||+.+.. ...+.+||.. +
T Consensus 189 g~~l~~~~~~~---~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~-~~~i~v~d~~~~~ 264 (343)
T 1ri6_A 189 EQYAYCVNELN---SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT-ASLITVFSVSEDG 264 (343)
T ss_dssp SSEEEEEETTT---TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT-TTEEEEEEECTTS
T ss_pred CCEEEEEeCCC---CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC-CCEEEEEEEcCCC
Confidence 5 467665322 246677774 4554322 111111 01111 2333 34 56666543 3578889887 5
Q ss_pred CceeeCcccccccCCcccccceEEEEeCC-eEEEEeCCCeEEEEEeecCCCCCCCccccccceeccCC
Q 014222 331 DSWSKHIDSKMHLGNSRALEAAALVPLNG-KLCIIRNNMSISLVDVSKSNGERGASAEHLWETISGKG 397 (428)
Q Consensus 331 ~~W~~v~~~~~~~~~~~~~~~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~~~~~~~~~~~W~~~~~~~ 397 (428)
.+++.+..++.... . . ......++ .||+.++....-.++..|+.+ ..++.+..++
T Consensus 265 ~~~~~~~~~~~~~~-~---~-~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~-------g~~~~~~~~~ 320 (343)
T 1ri6_A 265 SVLSKEGFQPTETQ-P---R-GFNVDHSGKYLIAAGQKSHHISVYEIVGEQ-------GLLHEKGRYA 320 (343)
T ss_dssp CCEEEEEEEECSSS-C---C-CEEECTTSSEEEEECTTTCEEEEEEEETTT-------TEEEEEEEEE
T ss_pred CceEEeeeecCCCc-c---c-eEEECCCCCEEEEecCCCCeEEEEEEcCCC-------ceeeEccccc
Confidence 56776655432221 1 1 22233344 466655445544555568878 7777766544
No 48
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.44 E-value=0.043 Score=49.06 Aligned_cols=222 Identities=9% Similarity=0.007 Sum_probs=115.2
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
++.+|+... ....+..||+. +++..... +.. ...-+++++..++.+|+.... ...+.+||+. ++..
T Consensus 72 ~g~l~v~~~---~~~~v~~~d~~-g~~~~~~~-~~~--~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 72 LGDIWFTEN---GANKIGKLSKK-GGFTEYPL-PQP--DSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIY 137 (300)
T ss_dssp TSCEEEEET---TTTEEEEECTT-SCEEEEEC-SST--TCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEE
T ss_pred CCCEEEEec---CCCeEEEECCC-CCeEEecC-CCC--CCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEE
Confidence 456676642 12368899998 66654321 111 122345555534478877421 2368899987 5554
Q ss_pred eCCCCCcC-CcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecC
Q 014222 198 RAPDMLRR-RHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLG 273 (428)
Q Consensus 198 ~~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~ 273 (428)
... ++.. ..-..++. -++++|+.... ...+.+||+ +.+...+.. +..........+ +|.||+....
T Consensus 138 ~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-------~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 138 EYD-LPNKGSYPAFITLGSDNALWFTENQ-------NNSIGRITN-TGKLEEYPL-PTNAAAPVGITSGNDGALWFVEIM 207 (300)
T ss_dssp EEE-CSSTTCCEEEEEECTTSSEEEEETT-------TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSSEEEEETT
T ss_pred Ecc-CCCCCCCceeEEECCCCCEEEEecC-------CCeEEEECC-CCcEEEeeC-CCCCCCcceEEECCCCCEEEEccC
Confidence 332 1111 11222333 25678886432 257899998 666655432 221122222333 6789987532
Q ss_pred CCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccc
Q 014222 274 SHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEA 351 (428)
Q Consensus 274 ~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~ 351 (428)
...+.+||+ ++++..... +........+.. +|+||+.... ...|.+||+. .+...... +...... .
T Consensus 208 ---~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~-~~~i~~~~~~-g~~~~~~~-~~~~~~~----~ 275 (300)
T 2qc5_A 208 ---GNKIGRITT-TGEISEYDI-PTPNARPHAITAGKNSEIWFTEWG-ANQIGRITND-NTIQEYQL-QTENAEP----H 275 (300)
T ss_dssp ---TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECSTTCEEEEETT-TTEEEEECTT-SCEEEEEC-CSTTCCC----C
T ss_pred ---CCEEEEEcC-CCcEEEEEC-CCCCCCceEEEECCCCCEEEeccC-CCeEEEECCC-CcEEEEEC-CccCCcc----c
Confidence 224789998 666665432 111111112333 5789888743 3589999994 55543321 1111111 1
Q ss_pred eEEEEeCCeEEEEeCCCeEEEEEeecCC
Q 014222 352 AALVPLNGKLCIIRNNMSISLVDVSKSN 379 (428)
Q Consensus 352 ~~~~~~~~~lyv~GG~~~~~~v~~yd~~ 379 (428)
..++..+++||+.+. . .+..||+.
T Consensus 276 ~i~~~~~g~l~v~~~--~--~i~~~~p~ 299 (300)
T 2qc5_A 276 GITFGKDGSVWFALK--C--KIGKLNLN 299 (300)
T ss_dssp CEEECTTSCEEEECS--S--EEEEEEEC
T ss_pred eeEeCCCCCEEEEcc--C--ceEEeCCC
Confidence 223334678888654 2 56777764
No 49
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.39 E-value=0.0067 Score=53.80 Aligned_cols=153 Identities=10% Similarity=-0.066 Sum_probs=94.1
Q ss_pred eeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCC
Q 014222 209 FGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETD 288 (428)
Q Consensus 209 ~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~ 288 (428)
.+....++.||+..|.. ..+.++|++|.+=..-- ++...++...+..+++||+.... ...+.+||+++.
T Consensus 58 qGL~~~~~~Ly~stG~~-------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~---~~~v~V~D~~Tl 126 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ-------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT---EGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEETTEEEEEETTT-------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS---SCEEEEEETTTT
T ss_pred ceEEEECCEEEEEcCCC-------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc---CCEEEEEECCcC
Confidence 35666789999998864 34899999998653322 55444455677789999998643 345789999887
Q ss_pred CeEecCCCCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCC
Q 014222 289 SWFPVYDGMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNM 368 (428)
Q Consensus 289 ~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~ 368 (428)
+-..--+.. ...-+.+.-+++||+..| .+.++++|+++.+-..--.... .+... ..--.+...+|+||+-- .
T Consensus 127 ~~~~ti~~~--~eGwGLt~Dg~~L~vSdG--s~~l~~iDp~T~~v~~~I~V~~-~g~~v-~~lNeLe~~dG~lyanv--w 198 (268)
T 3nok_A 127 QRERTTRYS--GEGWGLCYWNGKLVRSDG--GTMLTFHEPDGFALVGAVQVKL-RGQPV-ELINELECANGVIYANI--W 198 (268)
T ss_dssp EEEEEEECS--SCCCCEEEETTEEEEECS--SSEEEEECTTTCCEEEEEECEE-TTEEC-CCEEEEEEETTEEEEEE--T
T ss_pred cEEEEEeCC--CceeEEecCCCEEEEECC--CCEEEEEcCCCCeEEEEEEeCC-CCccc-ccccccEEeCCEEEEEE--C
Confidence 644221112 222334556788999986 4589999999875332111111 01110 00122445588999643 2
Q ss_pred eEEEEEeecCCC
Q 014222 369 SISLVDVSKSNG 380 (428)
Q Consensus 369 ~~~~v~~yd~~~ 380 (428)
..+.|.+-|+.+
T Consensus 199 ~s~~I~vIDp~T 210 (268)
T 3nok_A 199 HSSDVLEIDPAT 210 (268)
T ss_dssp TCSEEEEECTTT
T ss_pred CCCeEEEEeCCC
Confidence 344678888877
No 50
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.39 E-value=0.015 Score=53.16 Aligned_cols=230 Identities=8% Similarity=0.010 Sum_probs=113.0
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCce
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKW 196 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 196 (428)
.+.+|+.... ...+.+||+.+++....-..+.. .. .++.. ++..+|+.+.. ...++++|+.+++.
T Consensus 9 ~~~~~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~----~~-~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 9 SNFGIVVEQH---LRRISFFSTDTLEILNQITLGYD----FV-DTAITSDCSNVVVTSDF------CQTLVQIETQLEPP 74 (331)
T ss_dssp CCEEEEEEGG---GTEEEEEETTTCCEEEEEECCCC----EE-EEEECSSSCEEEEEEST------TCEEEEEECSSSSC
T ss_pred CCEEEEEecC---CCeEEEEeCcccceeeeEEccCC----cc-eEEEcCCCCEEEEEeCC------CCeEEEEECCCCce
Confidence 5677777632 23788999999887554333321 12 44443 34357776542 23799999988864
Q ss_pred -e-eCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE-CC-EEEEE
Q 014222 197 -H-RAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY-EG-KWFLK 270 (428)
Q Consensus 197 -~-~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~g-~lyv~ 270 (428)
. .+.....+. ++++.. +..+| .+... .....+.+||..+.+-...-+. ......++.. +| .+|+.
T Consensus 75 ~~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~----~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~ 145 (331)
T 3u4y_A 75 KVVAIQEGQSSM--ADVDITPDDQFAV-TVTGL----NHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILI 145 (331)
T ss_dssp EEEEEEECSSCC--CCEEECTTSSEEE-ECCCS----SSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEE
T ss_pred eEEecccCCCCc--cceEECCCCCEEE-EecCC----CCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEE
Confidence 2 221111111 112222 34566 33221 1123899999988865433221 1112233322 55 47777
Q ss_pred ecCCCCceeEEEEeCCCCC-eEec-CCCCcCCCCCceEEE--CCe-EEEEEccCCcEEEEEeCCCCce-eeCcccccccC
Q 014222 271 GLGSHRQVLSEAYQPETDS-WFPV-YDGMVAGWRNPSASL--NRH-LYALDCKDGCKIRVYDEVTDSW-SKHIDSKMHLG 344 (428)
Q Consensus 271 Gg~~~~~~~i~~yd~~~~~-W~~~-~~~~~~~~~~~~~~~--~~~-lyv~gG~~~~~i~~yd~~~~~W-~~v~~~~~~~~ 344 (428)
+..... .+..||...+. .... ............+.+ +++ ||+.+.. ...|.+||+++.+. ..+..++.. .
T Consensus 146 ~~~~~~--~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~d~~~~~~~~~~~~~~~~-~ 221 (331)
T 3u4y_A 146 DRSSAN--TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI-GNSIGILETQNPENITLLNAVGTN-N 221 (331)
T ss_dssp EETTTT--EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT-TTEEEEEECSSTTSCEEEEEEECS-S
T ss_pred ecCCCc--eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC-CCeEEEEECCCCcccceeeeccCC-C
Confidence 543222 14455544321 1111 000111111112222 454 7777643 35899999987765 112222211 1
Q ss_pred CcccccceEEEEeCCe-EEEEeCCCeEEEEEeecCCC
Q 014222 345 NSRALEAAALVPLNGK-LCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 345 ~~~~~~~~~~~~~~~~-lyv~GG~~~~~~v~~yd~~~ 380 (428)
.. ....+..+++ ||+... ....+.+||+.+
T Consensus 222 ~~----~~~~~spdg~~l~v~~~--~~~~i~~~d~~~ 252 (331)
T 3u4y_A 222 LP----GTIVVSRDGSTVYVLTE--STVDVFNFNQLS 252 (331)
T ss_dssp CC----CCEEECTTSSEEEEECS--SEEEEEEEETTT
T ss_pred CC----ceEEECCCCCEEEEEEc--CCCEEEEEECCC
Confidence 11 1233444555 666544 334588899987
No 51
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.38 E-value=0.019 Score=53.23 Aligned_cols=210 Identities=10% Similarity=0.109 Sum_probs=100.0
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceee
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGS 211 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~ 211 (428)
..+.+||..++++..+..+... ...-.+++...++..++.|+.++ .+.+||..++++.....+.........
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~v~~ 101 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEH--NGQVTGVDWAPDSNRIVTCGTDR------NAYVWTLKGRTWKPTLVILRINRAARC 101 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECC--SSCEEEEEEETTTTEEEEEETTS------CEEEEEEETTEEEEEEECCCCSSCEEE
T ss_pred CEEEEEeCCCCcEEeeeeecCC--CCcccEEEEeCCCCEEEEEcCCC------eEEEEECCCCeeeeeEEeecCCCceeE
Confidence 3688899888876554433321 11223344443335777776542 588889888876544322211222222
Q ss_pred EEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCc-eEEcCCCCCC-ccceEEEEE--CCEEEEEecCCCCceeEEEEeC
Q 014222 212 CVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNR-WSFISDMSTA-MVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQP 285 (428)
Q Consensus 212 ~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~-~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~ 285 (428)
..+ +++.++.|+.+ ..+.+||..+.. |........+ ........+ ++.+++.|+... .+..||.
T Consensus 102 ~~~~~~~~~l~~~~~d-------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~~~d~ 171 (372)
T 1k8k_C 102 VRWAPNEKKFAVGSGS-------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF---KCRIFSA 171 (372)
T ss_dssp EEECTTSSEEEEEETT-------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS---CEEEEEC
T ss_pred EEECCCCCEEEEEeCC-------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC---CEEEEEc
Confidence 222 46666666653 457777776553 3222211111 111122222 566666665432 3567885
Q ss_pred CCCC---------eE-------ecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcc
Q 014222 286 ETDS---------WF-------PVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSR 347 (428)
Q Consensus 286 ~~~~---------W~-------~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~ 347 (428)
.... |. .+............+.+ ++.+++.++.++ .|.+||..+.+-.. .+.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~--~~~~~~~~v- 247 (372)
T 1k8k_C 172 YIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS-TVCLADADKKMAVA--TLASETLPL- 247 (372)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT-EEEEEEGGGTTEEE--EEECSSCCE-
T ss_pred ccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC-EEEEEECCCCceeE--EEccCCCCe-
Confidence 4211 11 11110100001112223 566777776554 89999998664322 211111111
Q ss_pred cccceEEEEeCCeEEEEeC
Q 014222 348 ALEAAALVPLNGKLCIIRN 366 (428)
Q Consensus 348 ~~~~~~~~~~~~~lyv~GG 366 (428)
.......++++++.|.
T Consensus 248 ---~~~~~~~~~~~l~~~~ 263 (372)
T 1k8k_C 248 ---LAVTFITESSLVAAGH 263 (372)
T ss_dssp ---EEEEEEETTEEEEEET
T ss_pred ---EEEEEecCCCEEEEEe
Confidence 1333445777777663
No 52
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.36 E-value=0.022 Score=50.37 Aligned_cols=191 Identities=13% Similarity=0.035 Sum_probs=97.7
Q ss_pred cEEEEEeCCEEEE-EeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEE
Q 014222 160 FGCAVLSGCHLYL-FGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEV 237 (428)
Q Consensus 160 ~~~~~~~~~~lyv-~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~ 237 (428)
.+++...++++|+ ... ....+.+||+.+........... ..-.++++. ++++|+... . ..+.+
T Consensus 27 ~~i~~~~~g~l~v~~~~------~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~-~-------~~i~~ 91 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEG------MYGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF-N-------NRVVT 91 (270)
T ss_dssp EEEEECTTCCEEEEECS------SSCEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET-T-------TEEEE
T ss_pred cceEECCCCCEEEEccC------CCCcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC-C-------CEEEE
Confidence 3455543336888 422 13468889987766554432111 111233333 567888754 2 57899
Q ss_pred EeCCCCceEEcCCCCCCccceEEEEE-CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE-ECCeEEEE
Q 014222 238 YDPNKNRWSFISDMSTAMVPFIGVVY-EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS-LNRHLYAL 315 (428)
Q Consensus 238 yd~~t~~W~~~~~~p~~~~~~~~~~~-~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~lyv~ 315 (428)
||+.+.....+..... .....++.- +|++|+.... ...+.+||..+........ .....-...+. -+++||+.
T Consensus 92 ~d~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 92 LAAGSNNQTVLPFDGL-NYPEGLAVDTQGAVYVADRG---NNRVVKLAAGSKTQTVLPF-TGLNDPDGVAVDNSGNVYVT 166 (270)
T ss_dssp ECTTCSCCEECCCCSC-SSEEEEEECTTCCEEEEEGG---GTEEEEECTTCCSCEECCC-CSCCSCCCEEECTTCCEEEE
T ss_pred EeCCCceEeeeecCCc-CCCcceEECCCCCEEEEECC---CCEEEEEECCCceeEeecc-ccCCCceeEEEeCCCCEEEE
Confidence 9998876554432111 111222222 6789987532 2246788876665443321 11011112232 25789988
Q ss_pred EccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEE-eCCeEEEEeCCCeEEEEEeecCCC
Q 014222 316 DCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVP-LNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 316 gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
...+ ..|.+||++...-...... ....+ .+++. .++.||+..... ..+.+||+.+
T Consensus 167 ~~~~-~~i~~~~~~~~~~~~~~~~--~~~~p-----~~i~~d~~g~l~v~~~~~--~~v~~~~~~~ 222 (270)
T 1rwi_B 167 DTDN-NRVVKLEAESNNQVVLPFT--DITAP-----WGIAVDEAGTVYVTEHNT--NQVVKLLAGS 222 (270)
T ss_dssp EGGG-TEEEEECTTTCCEEECCCS--SCCSE-----EEEEECTTCCEEEEETTT--SCEEEECTTC
T ss_pred ECCC-CEEEEEecCCCceEeeccc--CCCCc-----eEEEECCCCCEEEEECCC--CcEEEEcCCC
Confidence 7543 4899999987654332211 11111 23333 356899876432 2367888877
No 53
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.34 E-value=0.046 Score=52.42 Aligned_cols=212 Identities=10% Similarity=0.119 Sum_probs=110.8
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++-... +... ..........+ ..++.|+.+ ..+.+||..+++-... +..........
T Consensus 180 ~i~vwd~~~~~~~~~--~~~h---~~~v~~~~~~~-~~l~s~s~d------g~i~~wd~~~~~~~~~--~~~~~~~v~~~ 245 (445)
T 2ovr_B 180 TLKVWNAETGECIHT--LYGH---TSTVRCMHLHE-KRVVSGSRD------ATLRVWDIETGQCLHV--LMGHVAAVRCV 245 (445)
T ss_dssp CEEEEETTTTEEEEE--ECCC---SSCEEEEEEET-TEEEEEETT------SEEEEEESSSCCEEEE--EECCSSCEEEE
T ss_pred eEEEEECCcCcEEEE--ECCC---CCcEEEEEecC-CEEEEEeCC------CEEEEEECCCCcEEEE--EcCCcccEEEE
Confidence 577888877653221 1111 11122333455 366666654 3688999887653321 11111222233
Q ss_pred EECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEe
Q 014222 213 VINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFP 292 (428)
Q Consensus 213 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~ 292 (428)
..++..++.|+.+ ..+.+||..+.+-.. .+............++...+.|+.+. .+..||..+.+-..
T Consensus 246 ~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~ 313 (445)
T 2ovr_B 246 QYDGRRVVSGAYD-------FMVKVWDPETETCLH--TLQGHTNRVYSLQFDGIHVVSGSLDT---SIRVWDVETGNCIH 313 (445)
T ss_dssp EECSSCEEEEETT-------SCEEEEEGGGTEEEE--EECCCSSCEEEEEECSSEEEEEETTS---CEEEEETTTCCEEE
T ss_pred EECCCEEEEEcCC-------CEEEEEECCCCcEeE--EecCCCCceEEEEECCCEEEEEeCCC---eEEEEECCCCCEEE
Confidence 4477777777764 578899987764322 11111122233444777666665432 36789987765332
Q ss_pred cCCCCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEE
Q 014222 293 VYDGMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISL 372 (428)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~ 372 (428)
.-. .......+...++.+++.|+.++ .|.+||..+.+-... +....... .....+..++.+++.|+.++ .
T Consensus 314 ~~~--~~~~~v~~~~~~~~~l~~~~~dg-~i~vwd~~~~~~~~~--~~~~~~~~---~~v~~~~~~~~~l~s~~~dg--~ 383 (445)
T 2ovr_B 314 TLT--GHQSLTSGMELKDNILVSGNADS-TVKIWDIKTGQCLQT--LQGPNKHQ---SAVTCLQFNKNFVITSSDDG--T 383 (445)
T ss_dssp EEC--CCCSCEEEEEEETTEEEEEETTS-CEEEEETTTCCEEEE--ECSTTSCS---SCEEEEEECSSEEEEEETTS--E
T ss_pred EEc--CCcccEEEEEEeCCEEEEEeCCC-eEEEEECCCCcEEEE--EccCCCCC---CCEEEEEECCCEEEEEeCCC--e
Confidence 211 11111123345667777777654 799999876543221 11110011 12334455677778887654 4
Q ss_pred EEeecCCC
Q 014222 373 VDVSKSNG 380 (428)
Q Consensus 373 v~~yd~~~ 380 (428)
+.+||..+
T Consensus 384 v~iwd~~~ 391 (445)
T 2ovr_B 384 VKLWDLKT 391 (445)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 66788776
No 54
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.34 E-value=0.044 Score=49.60 Aligned_cols=217 Identities=12% Similarity=0.098 Sum_probs=106.3
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++....-.-.. ..-.+++...+++.++.|+.+ ..+.+||..+++-... +..........
T Consensus 46 ~i~iw~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~~~d------~~i~vwd~~~~~~~~~--~~~~~~~v~~~ 113 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISGHK----LGISDVAWSSDSNLLVSASDD------KTLKIWDVSSGKCLKT--LKGHSNYVFCC 113 (312)
T ss_dssp CEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCEEEE--EECCSSCEEEE
T ss_pred eEEEEeCCCcccchhhccCC----CceEEEEEcCCCCEEEEECCC------CEEEEEECCCCcEEEE--EcCCCCCEEEE
Confidence 56778887776543211111 112233333333577777654 3688999887653221 11111111111
Q ss_pred EE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCC
Q 014222 213 VI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETD 288 (428)
Q Consensus 213 ~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~ 288 (428)
.+ ++.+++.|+.+ ..+.+||..+.+-... ++..........+ ++++++.|+... .+..||..+.
T Consensus 114 ~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~~wd~~~~ 181 (312)
T 4ery_A 114 NFNPQSNLIVSGSFD-------ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG---LCRIWDTASG 181 (312)
T ss_dssp EECSSSSEEEEEETT-------SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTC
T ss_pred EEcCCCCEEEEEeCC-------CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC---cEEEEECCCC
Confidence 22 45666667654 4788999987653221 1111111222222 566666665432 4678998876
Q ss_pred CeEecCCCCcCCCCCceEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeC
Q 014222 289 SWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRN 366 (428)
Q Consensus 289 ~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG 366 (428)
+-...-.... ......+. -+++.++.++.++ .|.+||..+.+-...- ........ .........++.+++.|+
T Consensus 182 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~l~sg~ 256 (312)
T 4ery_A 182 QCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTY--TGHKNEKY-CIFANFSVTGGKWIVSGS 256 (312)
T ss_dssp CEEEEECCSS-CCCEEEEEECTTSSEEEEEETTT-EEEEEETTTTEEEEEE--CSSCCSSS-CCCEEEECSSSCEEEECC
T ss_pred ceeeEEeccC-CCceEEEEECCCCCEEEEEcCCC-eEEEEECCCCcEEEEE--EecCCceE-EEEEEEEeCCCcEEEEEC
Confidence 5432211010 10111122 2566667776654 8999999876432211 11111000 011222334677777777
Q ss_pred CCeEEEEEeecCCC
Q 014222 367 NMSISLVDVSKSNG 380 (428)
Q Consensus 367 ~~~~~~v~~yd~~~ 380 (428)
.++ .+.+||..+
T Consensus 257 ~dg--~i~vwd~~~ 268 (312)
T 4ery_A 257 EDN--LVYIWNLQT 268 (312)
T ss_dssp TTS--CEEEEETTT
T ss_pred CCC--EEEEEECCC
Confidence 654 356788776
No 55
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.32 E-value=0.021 Score=54.65 Aligned_cols=188 Identities=9% Similarity=-0.038 Sum_probs=103.1
Q ss_pred CceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcc
Q 014222 130 GKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHF 208 (428)
Q Consensus 130 ~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~ 208 (428)
+...++++|..+++...+...+. ...+.+.. +|..|++.+..+ ....++++|..+++...+...... .
T Consensus 201 ~~~~i~~~d~~tg~~~~l~~~~~-----~~~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~~~~l~~~~~~--~ 269 (415)
T 2hqs_A 201 GRSALVIQTLANGAVRQVASFPR-----HNGAPAFSPDGSKLAFALSKT----GSLNLYVMDLASGQIRQVTDGRSN--N 269 (415)
T ss_dssp SSCEEEEEETTTCCEEEEECCSS-----CEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCCEEECCCCSSC--E
T ss_pred CCcEEEEEECCCCcEEEeecCCC-----cccCEEEcCCCCEEEEEEecC----CCceEEEEECCCCCEEeCcCCCCc--c
Confidence 34578899999888766544322 12233333 343455454433 234799999999887766543211 1
Q ss_pred eeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEE-EEECCEEEEEecCCCCceeEEEEeCC
Q 014222 209 FGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIG-VVYEGKWFLKGLGSHRQVLSEAYQPE 286 (428)
Q Consensus 209 ~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~-~~~~g~lyv~Gg~~~~~~~i~~yd~~ 286 (428)
...+. -+++.+++++..+ ....++.+|..+.+-..+.... ...... ..-+|+..++++.......++.+|+.
T Consensus 270 ~~~~~spdg~~l~~~s~~~----g~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 270 TEPTWFPDSQNLAFTSDQA----GRPQVYKVNINGGAPQRITWEG--SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp EEEEECTTSSEEEEEECTT----SSCEEEEEETTSSCCEECCCSS--SEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred cceEECCCCCEEEEEECCC----CCcEEEEEECCCCCEEEEecCC--CcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 11222 2455444443221 1357899999887655443211 111112 22266654454433334568999999
Q ss_pred CCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCC--cEEEEEeCCCCceeeCcc
Q 014222 287 TDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDG--CKIRVYDEVTDSWSKHID 338 (428)
Q Consensus 287 ~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~--~~i~~yd~~~~~W~~v~~ 338 (428)
+.+...+.... ....+. -+++.+++++.++ ..++.+|.+.+....+..
T Consensus 344 ~~~~~~l~~~~----~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 344 TGGVQVLSSTF----LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp TCCEEECCCSS----SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred CCCEEEecCCC----CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 98887765421 112222 3666666655433 279999998777666643
No 56
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.30 E-value=0.03 Score=51.95 Aligned_cols=239 Identities=11% Similarity=0.040 Sum_probs=112.2
Q ss_pred cceEEEEeeCC--CCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCc
Q 014222 118 EEWIYVIKRDR--EGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNK 195 (428)
Q Consensus 118 ~~~l~v~gg~~--~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 195 (428)
+..||+...+. .+...++.+|+.+++...+...+.. ......++. ++..||+.+.. ...+.+|+..++.
T Consensus 61 g~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~--~~~p~~~~~-dg~~l~~~~~~------~~~v~~~~~~~~g 131 (361)
T 3scy_A 61 GKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTM--GADPCYLTT-NGKNIVTANYS------GGSITVFPIGQDG 131 (361)
T ss_dssp SSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECS--SSCEEEEEE-CSSEEEEEETT------TTEEEEEEBCTTS
T ss_pred CCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccC--CCCcEEEEE-CCCEEEEEECC------CCEEEEEEeCCCC
Confidence 45677776542 2334556677776777666443321 011223334 66567766421 2468888876442
Q ss_pred -eeeCCC-------CCcC----C-cceeeEEE-CC-EEEEEccccCCCCCCCCeEEEEeCCCCc-------eEEc-----
Q 014222 196 -WHRAPD-------MLRR----R-HFFGSCVI-NN-CLYVAGGENGGVHRSLRSAEVYDPNKNR-------WSFI----- 248 (428)
Q Consensus 196 -W~~~~~-------~~~~----r-~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~v~~yd~~t~~-------W~~~----- 248 (428)
...+.. -+.+ . ..+.++.- ++ .+|+.+.. ...+.+|+...+. ....
T Consensus 132 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-------~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 132 ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG-------TDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-------TTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-------CCEEEEEEEcCCCCcccccceeecccccc
Confidence 211110 0100 0 11223332 45 47776432 1467778665443 2111
Q ss_pred CCCCCCc-cceEEEEECC-EEEEEecCCCCceeEEEEeCCCCCeEecCCC---CcCCCCCceEEE--CCe-EEEEEccCC
Q 014222 249 SDMSTAM-VPFIGVVYEG-KWFLKGLGSHRQVLSEAYQPETDSWFPVYDG---MVAGWRNPSASL--NRH-LYALDCKDG 320 (428)
Q Consensus 249 ~~~p~~~-~~~~~~~~~g-~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~---~~~~~~~~~~~~--~~~-lyv~gG~~~ 320 (428)
...+... ..+.+..-+| .+|+.+.. ...+..||..+++.+.+... +........+.+ +++ ||+......
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~ 281 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEI---GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA 281 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETT---TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCC---CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence 0111111 1122222255 47776522 22467788777766544321 111111112333 555 666554313
Q ss_pred cEEEEEeC--CCCceeeCcccccccCCcccccceEEEEeCCe-EEEEeCCCeEEEEEeecCCC
Q 014222 321 CKIRVYDE--VTDSWSKHIDSKMHLGNSRALEAAALVPLNGK-LCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 321 ~~i~~yd~--~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~-lyv~GG~~~~~~v~~yd~~~ 380 (428)
+.+.+|+. ++.+++.+...+. .... ....+..+++ ||+.+.....-.++.+|+++
T Consensus 282 ~~i~v~~~~~~~g~~~~~~~~~~-g~~~----~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~ 339 (361)
T 3scy_A 282 DGVAIFKVDETNGTLTKVGYQLT-GIHP----RNFIITPNGKYLLVACRDTNVIQIFERDQAT 339 (361)
T ss_dssp CEEEEEEECTTTCCEEEEEEEEC-SSCC----CEEEECTTSCEEEEEETTTTEEEEEEECTTT
T ss_pred CEEEEEEEcCCCCcEEEeeEecC-CCCC----ceEEECCCCCEEEEEECCCCCEEEEEEECCC
Confidence 46777765 5677777665443 1111 1223334454 66665455555566678777
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.27 E-value=0.027 Score=53.33 Aligned_cols=216 Identities=10% Similarity=0.103 Sum_probs=109.2
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++....-. .. .........++ ++++.|+.+ ..+.+||..+..-. +..+..........
T Consensus 157 ~i~iwd~~~~~~~~~~~--~~---~~~v~~~~~~~-~~l~~~~~d------g~i~i~d~~~~~~~-~~~~~~~~~~v~~~ 223 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMA--GH---QARVGCLSWNR-HVLSSGSRS------GAIHHHDVRIANHQ-IGTLQGHSSEVCGL 223 (401)
T ss_dssp CEEEEETTTCCEEEEEC--CC---SSCEEEEEEET-TEEEEEETT------SEEEEEETTSSSCE-EEEEECCSSCEEEE
T ss_pred eEEEEECcCCeEEEEec--CC---CCceEEEEECC-CEEEEEcCC------CCEEEEecccCcce-eeEEcCCCCCeeEE
Confidence 57788887765332211 11 11222334466 577777654 36888998743211 11111111111122
Q ss_pred EE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEE-cCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCC
Q 014222 213 VI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF-ISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPET 287 (428)
Q Consensus 213 ~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~ 287 (428)
.+ ++..++.|+.+ ..+.+||..+.+-.. +...... -..++.. +..+++.|++.. ...+..||..+
T Consensus 224 ~~~~~~~~l~s~~~d-------~~v~iwd~~~~~~~~~~~~~~~~--v~~~~~~p~~~~ll~~~~gs~-d~~i~i~d~~~ 293 (401)
T 4aez_A 224 AWRSDGLQLASGGND-------NVVQIWDARSSIPKFTKTNHNAA--VKAVAWCPWQSNLLATGGGTM-DKQIHFWNAAT 293 (401)
T ss_dssp EECTTSSEEEEEETT-------SCEEEEETTCSSEEEEECCCSSC--CCEEEECTTSTTEEEEECCTT-TCEEEEEETTT
T ss_pred EEcCCCCEEEEEeCC-------CeEEEccCCCCCccEEecCCcce--EEEEEECCCCCCEEEEecCCC-CCEEEEEECCC
Confidence 22 56677777754 578999998754322 1111111 1122222 345666664211 23477899887
Q ss_pred CCeEecCCCCcCCCCCceEEE--CCe-EEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEE
Q 014222 288 DSWFPVYDGMVAGWRNPSASL--NRH-LYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCII 364 (428)
Q Consensus 288 ~~W~~~~~~~~~~~~~~~~~~--~~~-lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~ 364 (428)
.+-...-.. ......+.+ ++. |++.+|.....|.+||..+.....+..+....... .......++++++.
T Consensus 294 ~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v----~~~~~s~dg~~l~s 366 (401)
T 4aez_A 294 GARVNTVDA---GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRV----LYSALSPDGRILST 366 (401)
T ss_dssp CCEEEEEEC---SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCC----CEEEECTTSSEEEE
T ss_pred CCEEEEEeC---CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCE----EEEEECCCCCEEEE
Confidence 654332211 111112222 444 44444655568999999887777665443322222 23344556778888
Q ss_pred eCCCeEEEEEeecCCC
Q 014222 365 RNNMSISLVDVSKSNG 380 (428)
Q Consensus 365 GG~~~~~~v~~yd~~~ 380 (428)
|+.++ .+.+||..+
T Consensus 367 ~~~dg--~i~iw~~~~ 380 (401)
T 4aez_A 367 AASDE--NLKFWRVYD 380 (401)
T ss_dssp ECTTS--EEEEEECCC
T ss_pred EeCCC--cEEEEECCC
Confidence 87665 356777766
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.25 E-value=0.023 Score=53.75 Aligned_cols=186 Identities=10% Similarity=0.056 Sum_probs=97.0
Q ss_pred ceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceee
Q 014222 119 EWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHR 198 (428)
Q Consensus 119 ~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 198 (428)
+.++..+.++ .+.+||..+++.......... ..-.+++...++..++.|+.++ .+.+||..+++...
T Consensus 104 ~~l~~~~~d~----~v~lw~~~~~~~~~~~~~~~~---~~v~~v~~s~~~~~l~~~~~dg------~i~iwd~~~~~~~~ 170 (401)
T 4aez_A 104 LNVVAVALER----NVYVWNADSGSVSALAETDES---TYVASVKWSHDGSFLSVGLGNG------LVDIYDVESQTKLR 170 (401)
T ss_dssp TSEEEEEETT----EEEEEETTTCCEEEEEECCTT---CCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEE
T ss_pred CCEEEEECCC----eEEEeeCCCCcEeEeeecCCC---CCEEEEEECCCCCEEEEECCCC------eEEEEECcCCeEEE
Confidence 4455554332 688999998876554333211 1223444443335777776542 58899988775433
Q ss_pred CCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCce--EEcCCCCCCccceEEEEE--CCEEEEEecCC
Q 014222 199 APDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRW--SFISDMSTAMVPFIGVVY--EGKWFLKGLGS 274 (428)
Q Consensus 199 ~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W--~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~ 274 (428)
. +............++.+++.|+.+ ..+.+||..+..- ..+.... ........ ++.+++.|+.+
T Consensus 171 ~--~~~~~~~v~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~s~~~d 238 (401)
T 4aez_A 171 T--MAGHQARVGCLSWNRHVLSSGSRS-------GAIHHHDVRIANHQIGTLQGHS---SEVCGLAWRSDGLQLASGGND 238 (401)
T ss_dssp E--ECCCSSCEEEEEEETTEEEEEETT-------SEEEEEETTSSSCEEEEEECCS---SCEEEEEECTTSSEEEEEETT
T ss_pred E--ecCCCCceEEEEECCCEEEEEcCC-------CCEEEEecccCcceeeEEcCCC---CCeeEEEEcCCCCEEEEEeCC
Confidence 2 111122222333466677777754 5889999874321 1111111 11122222 56666666543
Q ss_pred CCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE---CCeEEEEEc-cCCcEEEEEeCCCCcee
Q 014222 275 HRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL---NRHLYALDC-KDGCKIRVYDEVTDSWS 334 (428)
Q Consensus 275 ~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~lyv~gG-~~~~~i~~yd~~~~~W~ 334 (428)
. .+..||..+.+-...-. ........+.+ +..+++.|+ .....|.+||..+.+-.
T Consensus 239 ~---~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 239 N---VVQIWDARSSIPKFTKT--NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp S---CEEEEETTCSSEEEEEC--CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred C---eEEEccCCCCCccEEec--CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 2 46789988754322111 01111112222 456777774 33458999999876543
No 59
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.24 E-value=0.02 Score=51.02 Aligned_cols=153 Identities=14% Similarity=0.002 Sum_probs=90.5
Q ss_pred eeeEEEC-CEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCC
Q 014222 209 FGSCVIN-NCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPET 287 (428)
Q Consensus 209 ~~~~~~~-~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~ 287 (428)
+++++.. +.+|+..|... .+.+.++|+.|.+=...-+++........+..+++||+.... ...+.+||+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~-----~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~---~~~v~viD~~t 95 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG-----RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL---KNIGFIYDRRT 95 (266)
T ss_dssp EEEEECSTTEEEEEECSTT-----TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT---CSEEEEEETTT
T ss_pred ccEEEeCCCeEEEECCCCC-----CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec---CCEEEEEECCC
Confidence 4555555 89999877421 268999999998754433344433445566678899998642 33578999987
Q ss_pred CCeE-ecCCCCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCcee-eCccc--ccccCCcccccceEEEEeCCeEEE
Q 014222 288 DSWF-PVYDGMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWS-KHIDS--KMHLGNSRALEAAALVPLNGKLCI 363 (428)
Q Consensus 288 ~~W~-~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~-~v~~~--~~~~~~~~~~~~~~~~~~~~~lyv 363 (428)
.+=. .++. . .....+.+.-+++||+..| .+.+.++|+++.+=. .+..- +.+.... ..+...+++||+
T Consensus 96 ~~v~~~i~~-g-~~~g~glt~Dg~~l~vs~g--s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~-----nele~~dg~lyv 166 (266)
T 2iwa_A 96 LSNIKNFTH-Q-MKDGWGLATDGKILYGSDG--TSILYEIDPHTFKLIKKHNVKYNGHRVIRL-----NELEYINGEVWA 166 (266)
T ss_dssp TEEEEEEEC-C-SSSCCEEEECSSSEEEECS--SSEEEEECTTTCCEEEEEECEETTEECCCE-----EEEEEETTEEEE
T ss_pred CcEEEEEEC-C-CCCeEEEEECCCEEEEECC--CCeEEEEECCCCcEEEEEEECCCCcccccc-----eeEEEECCEEEE
Confidence 6422 2221 1 1221222333567998875 458999999886532 22210 1111111 233334889997
Q ss_pred EeCCCeEEEEEeecCCC
Q 014222 364 IRNNMSISLVDVSKSNG 380 (428)
Q Consensus 364 ~GG~~~~~~v~~yd~~~ 380 (428)
--.. .+.|.+-|+.+
T Consensus 167 n~~~--~~~V~vID~~t 181 (266)
T 2iwa_A 167 NIWQ--TDCIARISAKD 181 (266)
T ss_dssp EETT--SSEEEEEETTT
T ss_pred ecCC--CCeEEEEECCC
Confidence 6432 34677888877
No 60
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.24 E-value=0.022 Score=52.28 Aligned_cols=185 Identities=11% Similarity=0.109 Sum_probs=91.9
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEc
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFI 248 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~ 248 (428)
.+++.|+.+ ..+.++|..+.+-...-.............-+++.++.|+.+ ..+.+||..+.+-...
T Consensus 93 ~~l~s~s~D------~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d-------g~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 93 PIAASSSLD------AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV-------GKVNIFGVESGKKEYS 159 (321)
T ss_dssp SEEEEEETT------SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT-------SEEEEEETTTCSEEEE
T ss_pred CEEEEEeCC------CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC-------CcEEEEEcCCCceeEE
Confidence 466666654 368889988775432111111111111112255666666653 5788898877643221
Q ss_pred CCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCCcEEEEE
Q 014222 249 SDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDGCKIRVY 326 (428)
Q Consensus 249 ~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~y 326 (428)
-..........+..-++++.+.|+.+. .+..||..+.+-...-.... .....+. -++.+++.|+.++ .|.+|
T Consensus 160 ~~~~~~~v~~~~~spdg~~lasg~~dg---~i~iwd~~~~~~~~~~~~h~--~~v~~l~~spd~~~l~s~s~dg-~i~iw 233 (321)
T 3ow8_A 160 LDTRGKFILSIAYSPDGKYLASGAIDG---IINIFDIATGKLLHTLEGHA--MPIRSLTFSPDSQLLVTASDDG-YIKIY 233 (321)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEEEEECCCS--SCCCEEEECTTSCEEEEECTTS-CEEEE
T ss_pred ecCCCceEEEEEECCCCCEEEEEcCCC---eEEEEECCCCcEEEEEcccC--CceeEEEEcCCCCEEEEEcCCC-eEEEE
Confidence 111111111111122667666665432 46789988775332211011 1111222 2677777777664 79999
Q ss_pred eCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 327 DEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 327 d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
|..+...... +....... .......+++.++.|+.++ .+.+||..+
T Consensus 234 d~~~~~~~~~--~~~h~~~v----~~~~~sp~~~~l~s~s~D~--~v~iwd~~~ 279 (321)
T 3ow8_A 234 DVQHANLAGT--LSGHASWV----LNVAFCPDDTHFVSSSSDK--SVKVWDVGT 279 (321)
T ss_dssp ETTTCCEEEE--ECCCSSCE----EEEEECTTSSEEEEEETTS--CEEEEETTT
T ss_pred ECCCcceeEE--EcCCCCce----EEEEECCCCCEEEEEeCCC--cEEEEeCCC
Confidence 9887654321 11111111 1223344677777777655 356777766
No 61
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.23 E-value=0.035 Score=51.52 Aligned_cols=99 Identities=12% Similarity=-0.047 Sum_probs=50.7
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCC-cce
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRR-HFF 209 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r-~~~ 209 (428)
..++.+|+.++++..+..... ..-..++.. ++..||+.+..... ...-.+|.++..+++.+.+...+... ...
T Consensus 29 i~~~~~d~~~g~~~~~~~~~~----~~p~~l~~spdg~~l~~~~~~~~~-~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~ 103 (361)
T 3scy_A 29 IYTFRFNEETGESLPLSDAEV----ANPSYLIPSADGKFVYSVNEFSKD-QAAVSAFAFDKEKGTLHLLNTQKTMGADPC 103 (361)
T ss_dssp EEEEEEETTTCCEEEEEEEEC----SCCCSEEECTTSSEEEEEECCSST-TCEEEEEEEETTTTEEEEEEEEECSSSCEE
T ss_pred EEEEEEeCCCCCEEEeecccC----CCCceEEECCCCCEEEEEEccCCC-CCcEEEEEEeCCCCcEEEeeEeccCCCCcE
Confidence 457777888888876654311 111223333 44357766543111 11224456666667776665443222 222
Q ss_pred eeEEECC-EEEEEccccCCCCCCCCeEEEEeCCCC
Q 014222 210 GSCVINN-CLYVAGGENGGVHRSLRSAEVYDPNKN 243 (428)
Q Consensus 210 ~~~~~~~-~iyv~GG~~~~~~~~~~~v~~yd~~t~ 243 (428)
.++. ++ .||+.... ...+.+||..++
T Consensus 104 ~~~~-dg~~l~~~~~~-------~~~v~~~~~~~~ 130 (361)
T 3scy_A 104 YLTT-NGKNIVTANYS-------GGSITVFPIGQD 130 (361)
T ss_dssp EEEE-CSSEEEEEETT-------TTEEEEEEBCTT
T ss_pred EEEE-CCCEEEEEECC-------CCEEEEEEeCCC
Confidence 2333 55 46665432 157888888654
No 62
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.23 E-value=0.099 Score=50.22 Aligned_cols=185 Identities=8% Similarity=0.046 Sum_probs=98.6
Q ss_pred EeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCC
Q 014222 165 LSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKN 243 (428)
Q Consensus 165 ~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~ 243 (428)
..+ ..++.|+.++ .+.+||..+.+-...-....... ..++. -++..++.|+.+ ..+.+||..+.
T Consensus 278 ~~~-~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~sg~~d-------g~i~vwd~~~~ 342 (464)
T 3v7d_B 278 GHG-NIVVSGSYDN------TLIVWDVAQMKCLYILSGHTDRI-YSTIYDHERKRCISASMD-------TTIRIWDLENG 342 (464)
T ss_dssp EET-TEEEEEETTS------CEEEEETTTTEEEEEECCCSSCE-EEEEEETTTTEEEEEETT-------SCEEEEETTTT
T ss_pred CCC-CEEEEEeCCC------eEEEEECCCCcEEEEecCCCCCE-EEEEEcCCCCEEEEEeCC-------CcEEEEECCCC
Confidence 345 4666666542 58899988765332211111111 12222 245666666654 47899999876
Q ss_pred ceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCCcEE
Q 014222 244 RWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDGCKI 323 (428)
Q Consensus 244 ~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i 323 (428)
+-.. .+............++...+.|+.+. .+..||+.+..-..... ........+...++.+.+.|+ + ..|
T Consensus 343 ~~~~--~~~~h~~~v~~~~~~~~~l~s~s~dg---~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-d-g~i 414 (464)
T 3v7d_B 343 ELMY--TLQGHTALVGLLRLSDKFLVSAAADG---SIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-E-NQF 414 (464)
T ss_dssp EEEE--EECCCSSCEEEEEECSSEEEEEETTS---EEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-T-TEE
T ss_pred cEEE--EEeCCCCcEEEEEEcCCEEEEEeCCC---cEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-C-CeE
Confidence 5322 11111222334445666666665432 46789988765322211 111111123355778777776 4 489
Q ss_pred EEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecC
Q 014222 324 RVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKS 378 (428)
Q Consensus 324 ~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~ 378 (428)
.+||.++.+-....... ... .-.++...++.+++.++.++...++++|.
T Consensus 415 ~iwd~~~g~~~~~~~~~-~~~-----~v~~v~~~~~~l~~~~~~~g~~~i~~ldf 463 (464)
T 3v7d_B 415 NIYNLRSGKLVHANILK-DAD-----QIWSVNFKGKTLVAAVEKDGQSFLEILDF 463 (464)
T ss_dssp EEEETTTCCEEESCTTT-TCS-----EEEEEEEETTEEEEEEEETTEEEEEEEEC
T ss_pred EEEECCCCcEEehhhcc-CCC-----cEEEEEecCCEEEEEEEeCCeEEEEEeec
Confidence 99999987654421111 111 11334445677777777677777777774
No 63
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.23 E-value=0.022 Score=51.84 Aligned_cols=204 Identities=10% Similarity=0.060 Sum_probs=101.6
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++......+... ...-.+++...+++.++.|+.+ ..+.+||..+.+....-... .......
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~~~~~~~~~--~~~i~~~ 189 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSS--APACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTLVRQFQGH--TDGASCI 189 (337)
T ss_dssp EEEEEECCCC--EEEEEEECS--SSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCC--SSCEEEE
T ss_pred cEEEEECCCCCcceeeecccC--CCceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCceeeeeecc--cCceEEE
Confidence 688899888764333222211 0112233333333566676654 25889998877543321111 1111222
Q ss_pred EE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE-ECCEEEEEecCCCCceeEEEEeCCCCC
Q 014222 213 VI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV-YEGKWFLKGLGSHRQVLSEAYQPETDS 289 (428)
Q Consensus 213 ~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~g~lyv~Gg~~~~~~~i~~yd~~~~~ 289 (428)
.+ ++..++.|+.+ ..+.+||..+.+-...-..+.. ...++. -+++++++|+... .+..||..+..
T Consensus 190 ~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~~---~i~~~~~~~~~ 257 (337)
T 1gxr_A 190 DISNDGTKLWTGGLD-------NTVRSWDLREGRQLQQHDFTSQ--IFSLGYCPTGEWLAVGMESS---NVEVLHVNKPD 257 (337)
T ss_dssp EECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECSSC--EEEEEECTTSSEEEEEETTS---CEEEEETTSSC
T ss_pred EECCCCCEEEEEecC-------CcEEEEECCCCceEeeecCCCc--eEEEEECCCCCEEEEEcCCC---cEEEEECCCCC
Confidence 22 56666666653 5789999987754332221111 112222 2566666665322 36789987765
Q ss_pred eEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCC
Q 014222 290 WFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNN 367 (428)
Q Consensus 290 W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~ 367 (428)
-..+.... .....+.+ ++++++.++.++ .+.+||..+.+-..... ..... .......+++.++.|+.
T Consensus 258 ~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg-~i~~~~~~~~~~~~~~~---~~~~v----~~~~~s~~~~~l~~~~~ 326 (337)
T 1gxr_A 258 KYQLHLHE---SCVLSLKFAYCGKWFVSTGKDN-LLNAWRTPYGASIFQSK---ESSSV----LSCDISVDDKYIVTGSG 326 (337)
T ss_dssp EEEECCCS---SCEEEEEECTTSSEEEEEETTS-EEEEEETTTCCEEEEEE---CSSCE----EEEEECTTSCEEEEEET
T ss_pred eEEEcCCc---cceeEEEECCCCCEEEEecCCC-cEEEEECCCCeEEEEec---CCCcE----EEEEECCCCCEEEEecC
Confidence 43332211 11112222 577777776654 89999988775442211 11111 12233445667777765
Q ss_pred Ce
Q 014222 368 MS 369 (428)
Q Consensus 368 ~~ 369 (428)
++
T Consensus 327 dg 328 (337)
T 1gxr_A 327 DK 328 (337)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 64
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.02 Score=53.04 Aligned_cols=189 Identities=7% Similarity=0.004 Sum_probs=97.7
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE--C--CEEEEEccccCCCCCCCCeEEEEeCCCCc
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--N--NCLYVAGGENGGVHRSLRSAEVYDPNKNR 244 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~v~~yd~~t~~ 244 (428)
..++.|+.++ .+.+||...+++..+..+...........+ + +.+++.|+.+ ..+.+||..+.+
T Consensus 24 ~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~ 90 (379)
T 3jrp_A 24 KRLATCSSDK------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------GKVLIWKEENGR 90 (379)
T ss_dssp SEEEEEETTS------CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------SCEEEEEEETTE
T ss_pred CEEEEEECCC------cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-------CEEEEEEcCCCc
Confidence 5666766542 477788776666554433322222222333 2 5667777754 478999999998
Q ss_pred eEEcCCCCCCccceEEEEE--C--CEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE------------
Q 014222 245 WSFISDMSTAMVPFIGVVY--E--GKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL------------ 308 (428)
Q Consensus 245 W~~~~~~p~~~~~~~~~~~--~--g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~------------ 308 (428)
|..+..+.........+.+ + +.+++.|+.. ..+..||..+..-...............+.+
T Consensus 91 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 167 (379)
T 3jrp_A 91 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD---GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 167 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--------
T ss_pred eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC---CcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccccc
Confidence 8766544332222233333 3 5566665532 2467888876632111000000000111111
Q ss_pred ---CCeEEEEEccCCcEEEEEeCCCC--ceeeCcccccccCCcccccceEEEEeC---CeEEEEeCCCeEEEEEeecCCC
Q 014222 309 ---NRHLYALDCKDGCKIRVYDEVTD--SWSKHIDSKMHLGNSRALEAAALVPLN---GKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 309 ---~~~lyv~gG~~~~~i~~yd~~~~--~W~~v~~~~~~~~~~~~~~~~~~~~~~---~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
++.+++.|+.++ .|.+||..+. .|..+..+....... .......+ +++++.|+.++. +.+||..+
T Consensus 168 ~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~h~~~v----~~~~~sp~~~~~~~l~s~~~dg~--i~iwd~~~ 240 (379)
T 3jrp_A 168 GTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWV----RDVAWSPTVLLRSYLASVSQDRT--CIIWTQDN 240 (379)
T ss_dssp --CTTCEEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCE----EEEEECCCCSSSEEEEEEETTSC--EEEEEESS
T ss_pred CCCCCCEEEEEeCCC-eEEEEEecCCCcceeeEEEEecccCcE----eEEEECCCCCCCCeEEEEeCCCE--EEEEeCCC
Confidence 477788887665 7888887654 355444332222111 12233334 678888876654 45566555
No 65
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.14 E-value=0.11 Score=46.25 Aligned_cols=196 Identities=9% Similarity=0.017 Sum_probs=101.5
Q ss_pred EEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCC---cC-CcceeeEE--ECCEEEEEccccCCCCCCCCe
Q 014222 161 GCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDML---RR-RHFFGSCV--INNCLYVAGGENGGVHRSLRS 234 (428)
Q Consensus 161 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~---~~-r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 234 (428)
++++..++.+|+.+..+ ..+.+||+.......++... .. ..-.++++ -++.+|+.+... ...
T Consensus 34 ~v~~~~~g~l~v~~~~~------~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~------~~~ 101 (286)
T 1q7f_A 34 GVAVNAQNDIIVADTNN------HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP------THQ 101 (286)
T ss_dssp EEEECTTCCEEEEEGGG------TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG------GCE
T ss_pred eEEECCCCCEEEEECCC------CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC------CCE
Confidence 44444333688875432 36889998755443333211 00 12223444 268999986431 157
Q ss_pred EEEEeCCCCceEEcCCCCCCccceEEEE-ECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCe
Q 014222 235 AEVYDPNKNRWSFISDMSTAMVPFIGVV-YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRH 311 (428)
Q Consensus 235 v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~ 311 (428)
+.+||+....-..+...... ....++. -+|++|+.... ...+.+||+.......+.. .........+.+ +++
T Consensus 102 i~~~d~~g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~g~~~~~~~~-~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 102 IQIYNQYGQFVRKFGATILQ-HPRGVTVDNKGRIIVVECK---VMRVIIFDQNGNVLHKFGC-SKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp EEEECTTSCEEEEECTTTCS-CEEEEEECTTSCEEEEETT---TTEEEEECTTSCEEEEEEC-TTTCSSEEEEEECSSSE
T ss_pred EEEECCCCcEEEEecCccCC-CceEEEEeCCCCEEEEECC---CCEEEEEcCCCCEEEEeCC-CCccCCcEEEEECCCCC
Confidence 89999665544444321111 1122222 36789987543 2347889976554444321 111111112333 578
Q ss_pred EEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 312 LYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 312 lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
||+.+..+ ..|.+||++.+....+.... ....+ ...++..+++||+...... ..+.+||++.
T Consensus 177 l~v~~~~~-~~i~~~~~~g~~~~~~~~~g-~~~~p----~~i~~d~~G~l~v~~~~~~-~~i~~~~~~g 238 (286)
T 1q7f_A 177 IFISDNRA-HCVKVFNYEGQYLRQIGGEG-ITNYP----IGVGINSNGEILIADNHNN-FNLTIFTQDG 238 (286)
T ss_dssp EEEEEGGG-TEEEEEETTCCEEEEESCTT-TSCSE----EEEEECTTCCEEEEECSSS-CEEEEECTTS
T ss_pred EEEEECCC-CEEEEEcCCCCEEEEEccCC-ccCCC----cEEEECCCCCEEEEeCCCC-EEEEEECCCC
Confidence 99887543 48999998766444433210 01111 1223334678998865431 1477888766
No 66
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.019 Score=59.62 Aligned_cols=233 Identities=12% Similarity=0.121 Sum_probs=115.9
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeC--CEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCccee
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSG--CHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFG 210 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~--~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~ 210 (428)
.+.+||...+++..+..+... ...-.+++.... +..++.|+.++ .+.+||..+++|..+..+........
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h--~~~V~~l~~s~~~~~~~l~s~s~Dg------~I~vwd~~~~~~~~~~~~~~h~~~V~ 103 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEENGRWSQIAVHAVHSASVN 103 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCC--SSCEEEEEECCTTSCSEEEEEETTS------CEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred cEEEEecCCCCCccceeccCC--cCceEEEEecCCCCCCEEEEEeCCC------eEEEEECCCCcccccccccCCCCCeE
Confidence 677788776666655443322 111233333221 25777777653 58889988888766544432222222
Q ss_pred eEEE--C--CEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE---------------CCEEEEEe
Q 014222 211 SCVI--N--NCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY---------------EGKWFLKG 271 (428)
Q Consensus 211 ~~~~--~--~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~---------------~g~lyv~G 271 (428)
.+.+ + +.+++.|+.+ ..+.+||..+..-.....+.........+.. ++.+.+.|
T Consensus 104 ~v~~sp~~~~~~l~sgs~d-------g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg 176 (753)
T 3jro_A 104 SVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 176 (753)
T ss_dssp EEEECCGGGCSEEEEEETT-------SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEE
T ss_pred EEEECCCCCCCEEEEEeCC-------CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEE
Confidence 3333 2 5677777754 5788999877622111000000111111112 35556666
Q ss_pred cCCCCceeEEEEeCCCC--CeEecCCCCcCCCCCceEEE--C---CeEEEEEccCCcEEEEEeCCCCc--eeeCc-cccc
Q 014222 272 LGSHRQVLSEAYQPETD--SWFPVYDGMVAGWRNPSASL--N---RHLYALDCKDGCKIRVYDEVTDS--WSKHI-DSKM 341 (428)
Q Consensus 272 g~~~~~~~i~~yd~~~~--~W~~~~~~~~~~~~~~~~~~--~---~~lyv~gG~~~~~i~~yd~~~~~--W~~v~-~~~~ 341 (428)
+.+. .+..||..+. .+..+...........++.+ + +.+++.|+.++ .|.+||..+.+ +.... ....
T Consensus 177 s~dg---~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg-~I~iwd~~~~~~~~~~~~~~~~~ 252 (753)
T 3jro_A 177 GADN---LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-TCIIWTQDNEQGPWKKTLLKEEK 252 (753)
T ss_dssp ETTS---CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS-CEEEEEESSSSSCCBCCBSSSSC
T ss_pred ECCC---eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC-EEEEecCCCCCCcceeEEeccCC
Confidence 5432 3566776544 34433221111111112232 3 67788887665 78889887753 22111 1100
Q ss_pred ccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCCCCCCccccccceeccC
Q 014222 342 HLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNGERGASAEHLWETISGK 396 (428)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~~~~~~~~~~W~~~~~~ 396 (428)
.... ........+++.++.|+.++ .+.+||..+ ...|.....+
T Consensus 253 ~~~~----v~~l~~spdg~~l~s~s~Dg--~I~vwd~~~------~~~~~~~~~~ 295 (753)
T 3jro_A 253 FPDV----LWRASWSLSGNVLALSGGDN--KVTLWKENL------EGKWEPAGEV 295 (753)
T ss_dssp CSSC----CCCEEECTTTCCEEEECSSS--CEECCBCCS------SSCCBCCCCB
T ss_pred CCCc----eEEEEEcCCCCEEEEEcCCC--EEEEEecCC------CCCccccccc
Confidence 1111 12334445777778877654 367888774 1456665443
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.031 Score=51.73 Aligned_cols=224 Identities=11% Similarity=0.058 Sum_probs=106.4
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEE-e--CCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcce
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-S--GCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFF 209 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~ 209 (428)
.+.+||...+++..+..+... ...-.+++.. . + .+++.|+.++ .+.+||..+++|..+..+.......
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~-~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~~~v 104 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFG-TILASCSYDG------KVLIWKEENGRWSQIAVHAVHSASV 104 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCC--SSCEEEEEECCGGGC-SEEEEEETTS------CEEEEEEETTEEEEEEEECCCSSCE
T ss_pred cEEEEecCCCcceeeeEecCC--CCcEEEEEeCCCCCC-CEEEEeccCC------EEEEEEcCCCceeEeeeecCCCcce
Confidence 566777765555544333221 1112233332 2 4 5777776543 5888999888876654443222222
Q ss_pred eeEEE--C--CEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccc-eEEEEE--------------CCEEEEE
Q 014222 210 GSCVI--N--NCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVP-FIGVVY--------------EGKWFLK 270 (428)
Q Consensus 210 ~~~~~--~--~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~-~~~~~~--------------~g~lyv~ 270 (428)
..+.+ + +.+++.|+.+ ..+.+||..+..-.....+...... ..+... ++.+++.
T Consensus 105 ~~~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~ 177 (379)
T 3jrp_A 105 NSVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 177 (379)
T ss_dssp EEEEECCGGGCSEEEEEETT-------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEE
T ss_pred EEEEeCCCCCCCEEEEecCC-------CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEE
Confidence 22222 2 5667777654 5788999877632111000000111 111111 4666666
Q ss_pred ecCCCCceeEEEEeCCCC--CeEecCCCCcCCCCCceEEE--C---CeEEEEEccCCcEEEEEeCCCCceeeCccccccc
Q 014222 271 GLGSHRQVLSEAYQPETD--SWFPVYDGMVAGWRNPSASL--N---RHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHL 343 (428)
Q Consensus 271 Gg~~~~~~~i~~yd~~~~--~W~~~~~~~~~~~~~~~~~~--~---~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~ 343 (428)
|+.+. .+..||..++ .|..+............+.+ + +.+++.++.++ .|.+||..+.............
T Consensus 178 ~~~dg---~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~ 253 (379)
T 3jrp_A 178 GGADN---LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-TCIIWTQDNEQGPWKKTLLKEE 253 (379)
T ss_dssp EETTS---CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-CEEEEEESSTTSCCEEEESSSS
T ss_pred EeCCC---eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC-EEEEEeCCCCCccceeeeeccc
Confidence 65432 3567776544 34443321111111112222 3 67777777665 7888888775321111110000
Q ss_pred CCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCC
Q 014222 344 GNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSN 379 (428)
Q Consensus 344 ~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~ 379 (428)
.... .........+++++++|+.++. +.+||..
T Consensus 254 ~~~~-~v~~~~~s~~g~~l~~~~~dg~--i~iw~~~ 286 (379)
T 3jrp_A 254 KFPD-VLWRASWSLSGNVLALSGGDNK--VTLWKEN 286 (379)
T ss_dssp CCSS-CEEEEEECSSSCCEEEEESSSS--EEEEEEE
T ss_pred cCCC-cEEEEEEcCCCCEEEEecCCCc--EEEEeCC
Confidence 0000 0112233446666676665443 4456554
No 68
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.13 E-value=0.035 Score=51.16 Aligned_cols=241 Identities=14% Similarity=0.064 Sum_probs=113.1
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECC-CCc
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSAR-TNK 195 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~-t~~ 195 (428)
++.||+.... .....+.+||..++++..+...... ...-..++.. ++..||+.+.. ...+.+|+.. +.+
T Consensus 50 dg~l~~~~~~-~~~~~v~~~~~~~g~~~~~~~~~~~--~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~ 120 (347)
T 3hfq_A 50 KDCLYSVDKE-DDEGGIAAWQIDGQTAHKLNTVVAP--GTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADGA 120 (347)
T ss_dssp TCEEEEEEEE-TTEEEEEEEEEETTEEEEEEEEEEE--SCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTSC
T ss_pred CCeEEEEEec-CCCceEEEEEecCCcEEEeeeeecC--CCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCC
Confidence 3447777632 2235788999888877665432111 0112234444 34356666421 2367777774 333
Q ss_pred eeeCCCC------CcCC----cceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCC-CCceEEcCC--CCCC-ccceEE
Q 014222 196 WHRAPDM------LRRR----HFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPN-KNRWSFISD--MSTA-MVPFIG 260 (428)
Q Consensus 196 W~~~~~~------~~~r----~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~-t~~W~~~~~--~p~~-~~~~~~ 260 (428)
...+... |.+| .-+.++. -++++|+.+... ..+.+||.. +.+...+.. .+.. ...+.+
T Consensus 121 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-------~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 121 LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-------DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-------TEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred eeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-------CEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 3332211 1111 1112222 256777764432 578899987 555543321 1111 111222
Q ss_pred EEECCE-EEEEecCCCCceeEEEEeCCCCCeEecCCC--CcCC----CCCceEEE--CCe-EEEEEccCCcEEEEEeCCC
Q 014222 261 VVYEGK-WFLKGLGSHRQVLSEAYQPETDSWFPVYDG--MVAG----WRNPSASL--NRH-LYALDCKDGCKIRVYDEVT 330 (428)
Q Consensus 261 ~~~~g~-lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~--~~~~----~~~~~~~~--~~~-lyv~gG~~~~~i~~yd~~~ 330 (428)
..-+|+ +|+.+... ....++.++..+++++.+... .+.. .....+.+ +|+ ||+.+..+ +.|.+||...
T Consensus 194 ~spdg~~l~v~~~~~-~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-~~v~v~~~~~ 271 (347)
T 3hfq_A 194 FSPDGQYAFLAGELS-SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-NTLAVFAVTA 271 (347)
T ss_dssp ECTTSSEEEEEETTT-TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-TEEEEEEECG
T ss_pred ECCCCCEEEEEeCCC-CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-CEEEEEEECC
Confidence 223565 77765322 233345555556666543221 1111 11112222 454 77766433 5788998763
Q ss_pred C-ceeeCcccccccCCcccccceEEEEeCC-eEEEEeCCCeEEEEEeecCCC
Q 014222 331 D-SWSKHIDSKMHLGNSRALEAAALVPLNG-KLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 331 ~-~W~~v~~~~~~~~~~~~~~~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+ +++.+..++...... ...++..++ .||+.+.......++..|+.+
T Consensus 272 ~g~~~~~~~~~~~~~~~----~~~~~spdg~~l~v~~~~~~~v~v~~~d~~t 319 (347)
T 3hfq_A 272 DGHLTLIQQISTEGDFP----RDFDLDPTEAFVVVVNQNTDNATLYARDLTS 319 (347)
T ss_dssp GGCEEEEEEEECSSSCC----CEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CCcEEEeEEEecCCCCc----CeEEECCCCCEEEEEEcCCCcEEEEEEeCCC
Confidence 3 566655443321112 122333445 477765544443444447777
No 69
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.13 E-value=0.029 Score=58.40 Aligned_cols=218 Identities=8% Similarity=-0.019 Sum_probs=117.4
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCC---cCCcc
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDML---RRRHF 208 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~---~~r~~ 208 (428)
.-+++||+.++++..+...... ...-.+++...++.|++.. . .-+++||+.+++|....... .....
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~--~~~v~~i~~d~~g~lwigt-~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNE--LLDVRVFYEDKNKKIWIGT-H-------AGVFVIDLASKKVIHHYDTSNSQLLENF 496 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTC--CCCEEEEEECTTSEEEEEE-T-------TEEEEEESSSSSCCEEECTTTSSCSCSC
T ss_pred CCEEEEcCCCCcEEEeccCCCC--CCeEEEEEECCCCCEEEEE-C-------CceEEEeCCCCeEEecccCcccccccce
Confidence 3578899999988877532111 1222334443334677642 1 35899999999887653222 00111
Q ss_pred -eeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCC---CCCCccceEEEEECCEEEEEecCCCCceeE-EE
Q 014222 209 -FGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISD---MSTAMVPFIGVVYEGKWFLKGLGSHRQVLS-EA 282 (428)
Q Consensus 209 -~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~---~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i-~~ 282 (428)
.++.. -+|.|++. ... ..+.+||+.+++++.... ++.........--+|.|++... .-+ .+
T Consensus 497 i~~i~~d~~g~lWig-t~~-------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-----~Glv~~ 563 (781)
T 3v9f_A 497 VRSIAQDSEGRFWIG-TFG-------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-----EGLVCF 563 (781)
T ss_dssp EEEEEECTTCCEEEE-ESS-------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-----TEEEEE
T ss_pred eEEEEEcCCCCEEEE-EcC-------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-----CCceEE
Confidence 12222 24667663 321 347889999999887653 2211111111112678887542 124 79
Q ss_pred EeCCCCCeEecCCC--CcCCCCCceEE-ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCC
Q 014222 283 YQPETDSWFPVYDG--MVAGWRNPSAS-LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNG 359 (428)
Q Consensus 283 yd~~~~~W~~~~~~--~~~~~~~~~~~-~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~ 359 (428)
||+.+++++..... .+.....+.+. -+|.|++.+. +.+.+||++++++....... ..........+.+..-+|
T Consensus 564 ~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~---~Gl~~~~~~~~~~~~~~~~d-Gl~~~~f~~~~~~~~~~G 639 (781)
T 3v9f_A 564 PSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN---TGISCYITSKKCFYTYDHSN-NIPQGSFISGCVTKDHNG 639 (781)
T ss_dssp SCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS---SCEEEEETTTTEEEEECGGG-TCCSSCEEEEEEEECTTS
T ss_pred ECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC---CceEEEECCCCceEEecccC-CccccccccCceEECCCC
Confidence 99999988766431 11111122222 2678888752 35999999999887764321 111110001122333356
Q ss_pred eEEEEeCCCeEEEEEeecCCC
Q 014222 360 KLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 360 ~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.||+ |+..+ +..|||..
T Consensus 640 ~l~~-g~~~G---l~~f~p~~ 656 (781)
T 3v9f_A 640 LIYF-GSING---LCFFNPDI 656 (781)
T ss_dssp CEEE-EETTE---EEEECSCC
T ss_pred EEEE-ECCCc---eEEEChhh
Confidence 6666 65555 44677765
No 70
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.13 E-value=0.016 Score=53.99 Aligned_cols=220 Identities=10% Similarity=0.071 Sum_probs=103.2
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCc-eeeCCCCCcCCcceee
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNK-WHRAPDMLRRRHFFGS 211 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~r~~~~~ 211 (428)
.+.+||..++.|..+..+... ...-.+++...+++.++.|+.++ .+.+||..++. |.....+.........
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 105 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDH--DKIVTCVDWAPKSNRIVTCSQDR------NAYVYEKRPDGTWKQTLVLLRLNRAATF 105 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCC--SSCEEEEEECTTTCCEEEEETTS------SEEEC------CCCCEEECCCCSSCEEE
T ss_pred EEEEEEccCCceEEEEEEecC--CceEEEEEEeCCCCEEEEEeCCC------eEEEEEcCCCCceeeeeEecccCCceEE
Confidence 567788888888777665532 11223444443335777776542 58888888776 4433222221112222
Q ss_pred EEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCc-eEEcCCCCCC-ccceEEEEE--CCEEEEEecCCCCceeEEEEeC
Q 014222 212 CVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNR-WSFISDMSTA-MVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQP 285 (428)
Q Consensus 212 ~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~-~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~ 285 (428)
+.+ +++.++.|+.+ ..+.+||..+.+ |.....+..+ ......+.+ ++++.+.|+.+. .+..||.
T Consensus 106 ~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~ 175 (377)
T 3dwl_C 106 VRWSPNEDKFAVGSGA-------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR---KAYVLSA 175 (377)
T ss_dssp EECCTTSSCCEEEESS-------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS---CEEEEEE
T ss_pred EEECCCCCEEEEEecC-------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC---EEEEEEE
Confidence 222 45666666653 468888887764 4333222221 111222222 566666665432 3567776
Q ss_pred CCCCeE----------------ecCCCCcCCCC-CceEEE--CCeEEEEEccCCcEEEEEeCCCCce--eeCcccccccC
Q 014222 286 ETDSWF----------------PVYDGMVAGWR-NPSASL--NRHLYALDCKDGCKIRVYDEVTDSW--SKHIDSKMHLG 344 (428)
Q Consensus 286 ~~~~W~----------------~~~~~~~~~~~-~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W--~~v~~~~~~~~ 344 (428)
.+.... .+.. . .... ...+.+ ++++++.|+.++ .|.+||..+.+- ..+..+.....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~v~~~~~sp~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~ 252 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAE-Y-PSGGWVHAVGFSPSGNALAYAGHDS-SVTIAYPSAPEQPPRALITVKLSQL 252 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEEC-C-CCSSSEEEEEECTTSSCEEEEETTT-EEC-CEECSTTSCEEECCCEECSSS
T ss_pred EecccCCCccccccccccchhhhhhc-c-cCCceEEEEEECCCCCEEEEEeCCC-cEEEEECCCCCCcceeeEeecCCCC
Confidence 543311 1111 1 1111 112222 667777776654 788999877643 11322222211
Q ss_pred CcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 345 NSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 345 ~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.. .......++++++.|+.... .+|+...
T Consensus 253 ~v----~~~~~s~~~~~l~~~~~~~~---~~~~~~~ 281 (377)
T 3dwl_C 253 PL----RSLLWANESAIVAAGYNYSP---ILLQGNE 281 (377)
T ss_dssp CE----EEEEEEETTEEEEEESSSSE---EEECCCC
T ss_pred ce----EEEEEcCCCCEEEEEcCCcE---EEEEeCC
Confidence 11 23344567888887765543 3666665
No 71
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.10 E-value=0.027 Score=51.41 Aligned_cols=237 Identities=14% Similarity=0.150 Sum_probs=111.0
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEE---eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcce
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL---SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFF 209 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~---~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~ 209 (428)
.+.+||..+++...+..+... ...-.+++.. .+ .+++.|+.++ .+.+||..+.+|..+..+.......
T Consensus 36 ~v~lwd~~~~~~~~~~~l~gH--~~~V~~v~~~~~~~~-~~l~s~s~D~------~v~iWd~~~~~~~~~~~~~~h~~~V 106 (316)
T 3bg1_A 36 SVKIFDVRNGGQILIADLRGH--EGPVWQVAWAHPMYG-NILASCSYDR------KVIIWREENGTWEKSHEHAGHDSSV 106 (316)
T ss_dssp EEEEEEEETTEEEEEEEEECC--SSCEEEEEECCGGGS-SCEEEEETTS------CEEEECCSSSCCCEEEEECCCSSCC
T ss_pred eEEEEEecCCCcEEEEEEcCC--CccEEEEEeCCCCCC-CEEEEEECCC------EEEEEECCCCcceEEEEccCCCCce
Confidence 677788776653322222211 0112233332 14 5777777553 5888998887765443222111111
Q ss_pred eeEEE--C--CEEEEEccccCCCCCCCCeEEEEeCCCC-ceEEcCCCCCCccceEEEEE-------------------CC
Q 014222 210 GSCVI--N--NCLYVAGGENGGVHRSLRSAEVYDPNKN-RWSFISDMSTAMVPFIGVVY-------------------EG 265 (428)
Q Consensus 210 ~~~~~--~--~~iyv~GG~~~~~~~~~~~v~~yd~~t~-~W~~~~~~p~~~~~~~~~~~-------------------~g 265 (428)
..+.+ + +.+++.|+.+ ..+.+||..+. .|.....+.........+.. .+
T Consensus 107 ~~v~~~p~~~g~~lasgs~D-------~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (316)
T 3bg1_A 107 NSVCWAPHDYGLILACGSSD-------GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYI 179 (316)
T ss_dssp CEEEECCTTTCSCEEEECSS-------SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCC
T ss_pred EEEEECCCCCCcEEEEEcCC-------CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCcccc
Confidence 12222 2 5566666654 46788887765 56543222111000000111 12
Q ss_pred EEEEEecCCCCceeEEEEeCCC-CCeEecCCCCcCCCC-CceEEE--C----CeEEEEEccCCcEEEEEeCCC---Ccee
Q 014222 266 KWFLKGLGSHRQVLSEAYQPET-DSWFPVYDGMVAGWR-NPSASL--N----RHLYALDCKDGCKIRVYDEVT---DSWS 334 (428)
Q Consensus 266 ~lyv~Gg~~~~~~~i~~yd~~~-~~W~~~~~~~~~~~~-~~~~~~--~----~~lyv~gG~~~~~i~~yd~~~---~~W~ 334 (428)
++++.|+.+. .+..||..+ ..|..+... ..... ...+.+ + +.+++.|+.++ .|.+||..+ +.|.
T Consensus 180 ~~l~sgs~D~---~v~lWd~~~~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~~~~las~s~D~-~v~iw~~~~~~~~~~~ 254 (316)
T 3bg1_A 180 KRFASGGCDN---LIKLWKEEEDGQWKEEQKL-EAHSDWVRDVAWAPSIGLPTSTIASCSQDG-RVFIWTCDDASSNTWS 254 (316)
T ss_dssp CBEECCBTTS---BCCEEEECTTSCEEEEECC-BCCSSCEEEEECCCCSSCSCCEEEEEETTC-EEEEEECSSTTCCCCB
T ss_pred ceEEEecCCC---eEEEEEeCCCCccceeeec-ccCCCceEEEEecCCCCCCCceEEEEcCCC-eEEEEEccCccccchh
Confidence 4455555432 244667653 457655432 11111 112222 2 26677777664 889998776 3443
Q ss_pred eCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCCCCCCccccccceeccCCccccch
Q 014222 335 KHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNGERGASAEHLWETISGKGQFKTLV 403 (428)
Q Consensus 335 ~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~~~~~~~~~~W~~~~~~~~~~~f~ 403 (428)
... +...... ........++++++.||.++. +.+|+... ...|..+..+.....++
T Consensus 255 ~~~-~~~~~~~----v~~v~~sp~g~~las~~~D~~--v~lw~~~~------~g~~~~~~~~~~~~~~~ 310 (316)
T 3bg1_A 255 PKL-LHKFNDV----VWHVSWSITANILAVSGGDNK--VTLWKESV------DGQWVCISDVNKGQGSV 310 (316)
T ss_dssp CCE-EEECSSC----EEEEEECTTTCCEEEEESSSC--EEEEEECT------TSCEEEEEECC------
T ss_pred hhh-hhcCCCc----EEEEEEcCCCCEEEEEcCCCe--EEEEEECC------CCcEEEeeeccCCCCce
Confidence 211 1111110 113334456777787776654 44566543 15798888777654443
No 72
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.10 E-value=0.1 Score=47.04 Aligned_cols=230 Identities=13% Similarity=0.158 Sum_probs=104.7
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEe---CCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcce
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLS---GCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFF 209 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~---~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~ 209 (428)
.+.+||..+++...+..+... ...-.+++... + .+++.|+.+ ..+.++|..+++|..+..+.......
T Consensus 32 ~v~iw~~~~~~~~~~~~l~gH--~~~V~~v~~s~~~~g-~~l~s~s~D------~~v~iWd~~~~~~~~~~~~~~h~~~v 102 (297)
T 2pm7_B 32 TIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFG-TILASCSYD------GKVMIWKEENGRWSQIAVHAVHSASV 102 (297)
T ss_dssp CEEEEEBCSSCBCCCEEECCC--SSCEEEEEECCGGGC-SEEEEEETT------TEEEEEEBSSSCBCCCEEECCCSSCE
T ss_pred EEEEEecCCCCcEEEEEEccc--cCCeEEEEecCCCcC-CEEEEEcCC------CEEEEEEcCCCceEEEEEeecCCCce
Confidence 567777765433222222211 11122333321 4 577777754 36889999888776553332111122
Q ss_pred eeEEE--C--CEEEEEccccCCCCCCCCeEEEEeCCCCc-eEE--cCCCCCCccceEEEEE---------------CCEE
Q 014222 210 GSCVI--N--NCLYVAGGENGGVHRSLRSAEVYDPNKNR-WSF--ISDMSTAMVPFIGVVY---------------EGKW 267 (428)
Q Consensus 210 ~~~~~--~--~~iyv~GG~~~~~~~~~~~v~~yd~~t~~-W~~--~~~~p~~~~~~~~~~~---------------~g~l 267 (428)
..+.+ + +.+++.|+.+ ..+.+||..+.. +.. +..-.. ....+.. ++++
T Consensus 103 ~~v~~~p~~~g~~l~s~s~d-------~~v~~wd~~~~~~~~~~~~~~h~~---~v~~~~~~p~~~~~~~~~~~~~~~~~ 172 (297)
T 2pm7_B 103 NSVQWAPHEYGPMLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAI---GVNSASWAPATIEEDGEHNGTKESRK 172 (297)
T ss_dssp EEEEECCGGGCSEEEEEETT-------SEEEEEEBCSSSCBCCEEEECCSS---CEEEEEECCCC------------CCE
T ss_pred eEEEeCcCCCCcEEEEEECC-------CcEEEEEecCCCceeeeeeecccC---ccceEeecCCcccccccCCCCCCcce
Confidence 22222 1 4566666654 578888877652 211 100000 0111111 2345
Q ss_pred EEEecCCCCceeEEEEeCCCC--CeEecCCCCcCCCC-CceEEE--C---CeEEEEEccCCcEEEEEeCCCC--ceeeCc
Q 014222 268 FLKGLGSHRQVLSEAYQPETD--SWFPVYDGMVAGWR-NPSASL--N---RHLYALDCKDGCKIRVYDEVTD--SWSKHI 337 (428)
Q Consensus 268 yv~Gg~~~~~~~i~~yd~~~~--~W~~~~~~~~~~~~-~~~~~~--~---~~lyv~gG~~~~~i~~yd~~~~--~W~~v~ 337 (428)
++.|+.+. .+..||..+. .|..... ...... ...+.+ + +.+++.|+.++ .|.+||..+. .|....
T Consensus 173 l~sgs~D~---~v~lwd~~~~~~~~~~~~~-l~~H~~~V~~v~~sp~~~~~~~las~s~D~-~v~iWd~~~~~~~~~~~~ 247 (297)
T 2pm7_B 173 FVTGGADN---LVKIWKYNSDAQTYVLEST-LEGHSDWVRDVAWSPTVLLRSYMASVSQDR-TCIIWTQDNEQGPWKKTL 247 (297)
T ss_dssp EEEEETTS---CEEEEEEETTTTEEEEEEE-ECCCSSCEEEEEECCCCSSSEEEEEEETTS-CEEEEEESSTTSCCEEEE
T ss_pred EEEEcCCC---cEEEEEEcCCCceEEEEEE-ecCCCCceEEEEECCCCCCceEEEEEECCC-cEEEEEeCCCCCccceee
Confidence 66665432 2455665443 3543322 111111 112333 2 36667776654 7888887653 454321
Q ss_pred ccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCCCCCCccccccceeccCC
Q 014222 338 DSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNGERGASAEHLWETISGKG 397 (428)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~~~~~~~~~~W~~~~~~~ 397 (428)
......... ........++++++.|+.++.- .+|+... ...|+.+..+.
T Consensus 248 ~~~~~~~~~---v~~~~~s~~g~~las~~~D~~v--~lw~~~~------~g~w~~~~~~~ 296 (297)
T 2pm7_B 248 LKEEKFPDV---LWRASWSLSGNVLALSGGDNKV--TLWKENL------EGKWEPAGEVH 296 (297)
T ss_dssp SSSSCCSSC---EEEEEECSSSCCEEEEETTSCE--EEEEECT------TSCEEEC----
T ss_pred eecccCCCc---EEEEEECCCCCEEEEEcCCCcE--EEEEECC------CCcEEeccccc
Confidence 100011111 1123334567777887766543 4555543 15688776653
No 73
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.08 E-value=0.016 Score=54.08 Aligned_cols=219 Identities=11% Similarity=0.008 Sum_probs=99.1
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++-..............-.+++...+++.++.|+.++ .+.+||..+++-...-....... ..++
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg------~v~iwd~~~~~~~~~~~~h~~~v-~~v~ 188 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF------SVKVWDLSQKAVLKSYNAHSSEV-NCVA 188 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS------CEEEEETTTTEEEEEECCCSSCE-EEEE
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC------eEEEEECCCCcEEEEEcCCCCCE-EEEE
Confidence 5777887776532222211100001123344443335777777543 58889988876433211111111 1122
Q ss_pred EE-C-CEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE---CCEEEEEecCCCCceeEEEEeCCC
Q 014222 213 VI-N-NCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY---EGKWFLKGLGSHRQVLSEAYQPET 287 (428)
Q Consensus 213 ~~-~-~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~---~g~lyv~Gg~~~~~~~i~~yd~~~ 287 (428)
.. + +.+++.++.+ ..+.+||..+.+-...............+.. ++.+++.|+.+. .+..||..+
T Consensus 189 ~s~~~~~~~~s~~~d-------g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~---~i~~wd~~~ 258 (357)
T 4g56_B 189 ACPGKDTIFLSCGED-------GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG---NVSLVNIKN 258 (357)
T ss_dssp ECTTCSSCEEEEETT-------SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS---CEEEEESSC
T ss_pred EccCCCceeeeeccC-------CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc---ceeEEECCC
Confidence 22 2 3466667654 4688899887654332222222222223333 356666665432 367888876
Q ss_pred CCeEecCCCCcCCCCCceEEE--CC-eEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEE-eCCeEEE
Q 014222 288 DSWFPVYDGMVAGWRNPSASL--NR-HLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVP-LNGKLCI 363 (428)
Q Consensus 288 ~~W~~~~~~~~~~~~~~~~~~--~~-~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~-~~~~lyv 363 (428)
.+=...- .........+.+ ++ ++.+.|+.++ .|.+||.++.+-... +. ..... ...+.. .++++++
T Consensus 259 ~~~~~~~--~~~~~~v~~l~~sp~~~~~lasgs~D~-~i~iwd~~~~~~~~~--~~-H~~~V----~~vafsP~d~~~l~ 328 (357)
T 4g56_B 259 PDSAQTS--AVHSQNITGLAYSYHSSPFLASISEDC-TVAVLDADFSEVFRD--LS-HRDFV----TGVAWSPLDHSKFT 328 (357)
T ss_dssp GGGCEEE--CCCSSCEEEEEECSSSSCCEEEEETTS-CEEEECTTSCEEEEE--CC-CSSCE----EEEEECSSSTTEEE
T ss_pred CcEeEEE--eccceeEEEEEEcCCCCCEEEEEeCCC-EEEEEECCCCcEeEE--CC-CCCCE----EEEEEeCCCCCEEE
Confidence 5421110 000111112222 34 5556666554 799999987754332 11 11111 112222 3677888
Q ss_pred EeCCCeEEEEEeecCCC
Q 014222 364 IRNNMSISLVDVSKSNG 380 (428)
Q Consensus 364 ~GG~~~~~~v~~yd~~~ 380 (428)
.||.++. |.+||..+
T Consensus 329 s~s~Dg~--v~iW~~~~ 343 (357)
T 4g56_B 329 TVGWDHK--VLHHHLPS 343 (357)
T ss_dssp EEETTSC--EEEEECC-
T ss_pred EEcCCCe--EEEEECCC
Confidence 8887653 45666544
No 74
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.049 Score=52.40 Aligned_cols=196 Identities=9% Similarity=-0.023 Sum_probs=95.9
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceee--CCCCCcCCcce-e-eEEEC---CEEEEEccccCCCCCCCCe
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHR--APDMLRRRHFF-G-SCVIN---NCLYVAGGENGGVHRSLRS 234 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~--~~~~~~~r~~~-~-~~~~~---~~iyv~GG~~~~~~~~~~~ 234 (428)
++...++..++.|+.+ ..+++++..+..... +..+....... . ...-+ +++++.|+.+ ..
T Consensus 155 ~~~sp~~~~l~~~~~~------g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-------~~ 221 (450)
T 2vdu_B 155 ISIAEDDTTVIIADKF------GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-------EH 221 (450)
T ss_dssp EEECTTSSEEEEEETT------SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-------SC
T ss_pred EEEcCCCCEEEEEeCC------CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-------Cc
Confidence 3333333566666542 368888887655332 11221111111 1 22235 7777777754 57
Q ss_pred EEEEeCCCCceEEc-CCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCC----------------
Q 014222 235 AEVYDPNKNRWSFI-SDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGM---------------- 297 (428)
Q Consensus 235 v~~yd~~t~~W~~~-~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~---------------- 297 (428)
+.+||..+.+-... ..-........+.. ++++++.|+.+ ..+..||..+.+-...-...
T Consensus 222 i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (450)
T 2vdu_B 222 IKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD---DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPR 297 (450)
T ss_dssp EEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS---SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---
T ss_pred EEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC---CeEEEEECCCCcEeeeecchhhhhhhhhhccccccc
Confidence 88999877653321 11111111222233 77777776643 24778998877643221100
Q ss_pred -------cCCCCCceEEE--CCeEEEEEccCCcEEEEEeC--C-CCceeeCcccccccCCcccccceEEEEeCCeEEEEe
Q 014222 298 -------VAGWRNPSASL--NRHLYALDCKDGCKIRVYDE--V-TDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIR 365 (428)
Q Consensus 298 -------~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~--~-~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~G 365 (428)
........+.. +++.+++++.....|.+||. . ...+..+..+... ... .++....+.+++..
T Consensus 298 ~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v-----~~~~~~~~~~~v~~ 371 (450)
T 2vdu_B 298 FQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNV-----ISLSAHNDEFQVTL 371 (450)
T ss_dssp -------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCE-----EEEEEETTEEEEEE
T ss_pred ccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-Cce-----EEEEecCCcEEEEE
Confidence 00000111122 35555555433458889988 3 3455655544322 111 34445557777776
Q ss_pred CCCe-------EEEEEeecCCC
Q 014222 366 NNMS-------ISLVDVSKSNG 380 (428)
Q Consensus 366 G~~~-------~~~v~~yd~~~ 380 (428)
+... .-.++.++..+
T Consensus 372 ~~~~~~~~~~~~i~v~~~~~~~ 393 (450)
T 2vdu_B 372 DNKESSGVQKNFAKFIEYNLNE 393 (450)
T ss_dssp CCTTCCSSCCCSEEEEEEETTT
T ss_pred ecccCCCCCCcceEEEEEEcCC
Confidence 5421 23566667766
No 75
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.06 E-value=0.061 Score=48.21 Aligned_cols=213 Identities=9% Similarity=-0.037 Sum_probs=109.6
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCc--eEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCc
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQL--WQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNK 195 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~--W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 195 (428)
++.+++.+. ....+.++|+.+++ |+.-..-. ...+.+++..++++++.+ ...+..||+ +++
T Consensus 4 ~~~~lv~~~---~~~~v~~~d~~tG~~~w~~~~~~~-----~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~ 66 (276)
T 3no2_A 4 PQHLLVGGS---GWNKIAIINKDTKEIVWEYPLEKG-----WECNSVAATKAGEILFSY--------SKGAKMITR-DGR 66 (276)
T ss_dssp CCEEEEECT---TCSEEEEEETTTTEEEEEEECCTT-----CCCCEEEECTTSCEEEEC--------BSEEEEECT-TSC
T ss_pred CCcEEEeeC---CCCEEEEEECCCCeEEEEeCCCcc-----CCCcCeEECCCCCEEEeC--------CCCEEEECC-CCC
Confidence 345566652 23478889998876 65432211 123455555444788732 236889998 553
Q ss_pred --eeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCC-ceEEc-C-CCCCC--ccceEEEEECCEE
Q 014222 196 --WHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKN-RWSFI-S-DMSTA--MVPFIGVVYEGKW 267 (428)
Q Consensus 196 --W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~-~W~~~-~-~~p~~--~~~~~~~~~~g~l 267 (428)
|+.-.. .....+++.. .+|++++..+.. ...+..+|+..+ .|+.- . ..+.. .........+|.+
T Consensus 67 ~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~ 138 (276)
T 3no2_A 67 ELWNIAAP--AGCEMQTARILPDGNALVAWCGH------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY 138 (276)
T ss_dssp EEEEEECC--TTCEEEEEEECTTSCEEEEEEST------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCE
T ss_pred EEEEEcCC--CCccccccEECCCCCEEEEecCC------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCE
Confidence 664332 1111223333 366766664421 146788888554 34322 1 11111 1112233447777
Q ss_pred EEEecCCCCceeEEEEeCCCC-CeEecCCCCcCCCCCceEE-ECCeEEEEEccCCcEEEEEeCCCCc--eeeCccccccc
Q 014222 268 FLKGLGSHRQVLSEAYQPETD-SWFPVYDGMVAGWRNPSAS-LNRHLYALDCKDGCKIRVYDEVTDS--WSKHIDSKMHL 343 (428)
Q Consensus 268 yv~Gg~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~i~~yd~~~~~--W~~v~~~~~~~ 343 (428)
++.... ...+.+||++-+ .|+.-.. .....+.. .++.+++.+..+ ..|..+|+++.+ |+.-..-....
T Consensus 139 lv~~~~---~~~v~~~d~~G~~~w~~~~~----~~~~~~~~~~~g~~~v~~~~~-~~v~~~d~~tG~~~w~~~~~~~~~~ 210 (276)
T 3no2_A 139 LVPLFA---TSEVREIAPNGQLLNSVKLS----GTPFSSAFLDNGDCLVACGDA-HCFVQLNLESNRIVRRVNANDIEGV 210 (276)
T ss_dssp EEEETT---TTEEEEECTTSCEEEEEECS----SCCCEEEECTTSCEEEECBTT-SEEEEECTTTCCEEEEEEGGGSBSC
T ss_pred EEEecC---CCEEEEECCCCCEEEEEECC----CCccceeEcCCCCEEEEeCCC-CeEEEEeCcCCcEEEEecCCCCCCc
Confidence 666432 224789998722 3665432 11122333 467888776544 479999999553 66532211110
Q ss_pred CCcccccceEEEEeCCeEEEEe
Q 014222 344 GNSRALEAAALVPLNGKLCIIR 365 (428)
Q Consensus 344 ~~~~~~~~~~~~~~~~~lyv~G 365 (428)
+. ..........++.+||..
T Consensus 211 -~l-~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 211 -QL-FFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp -CC-SEEEEEEECTTSCEEEEE
T ss_pred -cc-cccccceEcCCCCEEEEe
Confidence 00 011244556689999986
No 76
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.98 E-value=0.23 Score=50.18 Aligned_cols=238 Identities=10% Similarity=-0.034 Sum_probs=121.3
Q ss_pred ceeEEEEeCC--C-CceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCC----CCCCCceEEEEECCC------Cce
Q 014222 131 KISWHAFDPI--Y-QLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDP----LKGSMRRVIFYSART------NKW 196 (428)
Q Consensus 131 ~~~~~~yd~~--~-~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~----~~~~~~~v~~yd~~t------~~W 196 (428)
...++.+|.. . +.-..+...+...........+.. +|..|+.. ..+. ......+++++|..+ +..
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 179 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCM-AEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV 179 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEE-EEEECSSSTTCEEEEEEEEETTSTTTTCGGGS
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEE-EecccCCCCCCceeEEEEEECCCCccccCCce
Confidence 3468888876 3 666666554311000112223333 45344444 3221 001235899999988 666
Q ss_pred eeCC-CCCcCCccee-eEEECCEEEEEccccCCC-CCCCCeEEEEeCC-CC---ceEEcCCCCCCccceEEEEECCEEEE
Q 014222 197 HRAP-DMLRRRHFFG-SCVINNCLYVAGGENGGV-HRSLRSAEVYDPN-KN---RWSFISDMSTAMVPFIGVVYEGKWFL 269 (428)
Q Consensus 197 ~~~~-~~~~~r~~~~-~~~~~~~iyv~GG~~~~~-~~~~~~v~~yd~~-t~---~W~~~~~~p~~~~~~~~~~~~g~lyv 269 (428)
+.+. .-. ..... ...-+|+..++...+... .-....++++|.. +. ....+..-...........-+|++|+
T Consensus 180 ~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 180 RELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIV 257 (662)
T ss_dssp EESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEE
T ss_pred eEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEE
Confidence 6554 221 11111 122355544444332110 0112579999998 56 34333221111111112223788776
Q ss_pred EecCCCCceeEEEEeCCCCCeEecCCCCcCC----CC---CceEEE-CCeEEEEEccCCcEEEEEeCCCCceeeCccccc
Q 014222 270 KGLGSHRQVLSEAYQPETDSWFPVYDGMVAG----WR---NPSASL-NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKM 341 (428)
Q Consensus 270 ~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~----~~---~~~~~~-~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~ 341 (428)
.+... ....++.+|+.+.+++.+....... +. ...+.. ++++++.+......++.+|.+++....+..-
T Consensus 258 ~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~-- 334 (662)
T 3azo_A 258 ATDRT-GWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGP-- 334 (662)
T ss_dssp EECTT-SSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSS--
T ss_pred EECCC-CCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCC--
Confidence 65433 3446899999889998875422111 11 112232 6778777755335788889988877666431
Q ss_pred ccCCcccccceEE-EEeCCeEEEEe-CCCeEEEEEeecCCC
Q 014222 342 HLGNSRALEAAAL-VPLNGKLCIIR-NNMSISLVDVSKSNG 380 (428)
Q Consensus 342 ~~~~~~~~~~~~~-~~~~~~lyv~G-G~~~~~~v~~yd~~~ 380 (428)
.... ..+ ...++.+++.. +......++.+|..+
T Consensus 335 -~~~~-----~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~ 369 (662)
T 3azo_A 335 -WTEW-----AATLTVSGTRAVGVAASPRTAYEVVELDTVT 369 (662)
T ss_dssp -CCEE-----EEEEEEETTEEEEEEEETTEEEEEEEEETTT
T ss_pred -CCeE-----EEEEecCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 1111 222 34466666554 455566788889877
No 77
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.96 E-value=0.032 Score=50.51 Aligned_cols=182 Identities=9% Similarity=0.091 Sum_probs=90.8
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcce-eeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceE
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFF-GSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWS 246 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~ 246 (428)
..++.|+.++ .+.+||..+.+....-.-. .... .++. -++++++.|+.+ ..+.+||..+.+-.
T Consensus 36 ~~l~s~~~dg------~i~iw~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~~~d-------~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 36 EWLASSSADK------LIKIWGAYDGKFEKTISGH--KLGISDVAWSSDSNLLVSASDD-------KTLKIWDVSSGKCL 100 (312)
T ss_dssp SEEEEEETTS------CEEEEETTTCCEEEEECCC--SSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTCCEE
T ss_pred CEEEEeeCCC------eEEEEeCCCcccchhhccC--CCceEEEEEcCCCCEEEEECCC-------CEEEEEECCCCcEE
Confidence 5666666542 4778888777654421111 1111 1222 256677777754 57899999876532
Q ss_pred EcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEEEccCCcE
Q 014222 247 FISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCK 322 (428)
Q Consensus 247 ~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~ 322 (428)
.. +.........+.+ ++.+++.|+.+. .+..||..+.+-...-. ........+.+ ++.+++.|+.++ .
T Consensus 101 ~~--~~~~~~~v~~~~~~~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~-~ 172 (312)
T 4ery_A 101 KT--LKGHSNYVFCCNFNPQSNLIVSGSFDE---SVRIWDVKTGKCLKTLP--AHSDPVSAVHFNRDGSLIVSSSYDG-L 172 (312)
T ss_dssp EE--EECCSSCEEEEEECSSSSEEEEEETTS---CEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTS-C
T ss_pred EE--EcCCCCCEEEEEEcCCCCEEEEEeCCC---cEEEEECCCCEEEEEec--CCCCcEEEEEEcCCCCEEEEEeCCC-c
Confidence 21 1111111112222 455566665432 36789988765332211 10111112222 577777777664 7
Q ss_pred EEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 323 IRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 323 i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
|.+||..+.+-...- ....... ........+++.++.|+.++ .+.+||..+
T Consensus 173 i~~wd~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~l~~~~~d~--~i~iwd~~~ 223 (312)
T 4ery_A 173 CRIWDTASGQCLKTL--IDDDNPP---VSFVKFSPNGKYILAATLDN--TLKLWDYSK 223 (312)
T ss_dssp EEEEETTTCCEEEEE--CCSSCCC---EEEEEECTTSSEEEEEETTT--EEEEEETTT
T ss_pred EEEEECCCCceeeEE--eccCCCc---eEEEEECCCCCEEEEEcCCC--eEEEEECCC
Confidence 999999876533211 1110000 11233444566777776554 356677665
No 78
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.96 E-value=0.059 Score=56.22 Aligned_cols=216 Identities=6% Similarity=-0.027 Sum_probs=114.0
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCC----CcCCcc
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDM----LRRRHF 208 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~----~~~r~~ 208 (428)
-+.+||+.++++..+...........-.+++...++.|++... .-+++||+.+++|+..... ......
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQRSFTTIEKEKDGTPVVSKQ 499 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------SCEEEEETTTTEEEECCBCTTCCBCCCCC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------CceeEEeCCCCeEEEccccccccccCCce
Confidence 4788999988877664321111111223333333335666421 2488999999999877533 111111
Q ss_pred -eeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCC--CCCcc--ceEEEE--ECCEEEEEecCCCCceeE
Q 014222 209 -FGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDM--STAMV--PFIGVV--YEGKWFLKGLGSHRQVLS 280 (428)
Q Consensus 209 -~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~--p~~~~--~~~~~~--~~g~lyv~Gg~~~~~~~i 280 (428)
.++.. -++.|++... ..+.+||+.++++ ..... ..... ...... -+|.|++.... -+
T Consensus 500 i~~i~~d~~g~lWigt~---------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-----Gl 564 (795)
T 4a2l_A 500 ITTLFRDSHKRLWIGGE---------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-----GF 564 (795)
T ss_dssp EEEEEECTTCCEEEEES---------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-----CE
T ss_pred EEEEEECCCCCEEEEeC---------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-----Cc
Confidence 11222 2467777432 2478899988888 43311 11111 112222 26788875421 36
Q ss_pred EEEeCCCCCeEecCCC--CcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEE
Q 014222 281 EAYQPETDSWFPVYDG--MVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVP 356 (428)
Q Consensus 281 ~~yd~~~~~W~~~~~~--~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~ 356 (428)
.+||+.+++++..... .+... ..++.. +|.|++.+. ..+..||++++++....... ..........+.+..
T Consensus 565 ~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~---~Gl~~~~~~~~~~~~~~~~d-Gl~~~~f~~~~~~~~ 639 (795)
T 4a2l_A 565 YCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN---RGISCFNPETEKFRNFTESD-GLQSNQFNTASYCRT 639 (795)
T ss_dssp EEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEET---TEEEEEETTTTEEEEECGGG-TCSCSCEEEEEEEEC
T ss_pred eeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC---CceEEEcCCCCcEEEcCCcC-CCccccCccCceeEC
Confidence 8999999988876421 11111 112222 578888763 47999999999887654321 111110001123333
Q ss_pred eCCeEEEEeCCCeEEEEEeecCCC
Q 014222 357 LNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 357 ~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
-+|.||+ |+..+ +..|+|..
T Consensus 640 ~~G~l~~-g~~~G---l~~~~p~~ 659 (795)
T 4a2l_A 640 SVGQMYF-GGING---ITTFRPEL 659 (795)
T ss_dssp TTSCEEE-EETTE---EEEECGGG
T ss_pred CCCeEEE-ecCCc---eEEEcHHH
Confidence 4567666 55554 34667655
No 79
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.95 E-value=0.024 Score=52.72 Aligned_cols=217 Identities=11% Similarity=-0.003 Sum_probs=101.3
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++-..............-.+++...+++.++.|+.++ .+.++|..+++-... +..........
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~------~i~iwd~~~~~~~~~--~~~h~~~V~~~ 175 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI------CIKVWDLAQQVVLSS--YRAHAAQVTCV 175 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEE--ECCCSSCEEEE
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC------eEEEEECCCCcEEEE--EcCcCCceEEE
Confidence 6778888776522111100000001123344443436777777553 588899888753321 11111111122
Q ss_pred EE--C-CEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE---CCEEEEEecCCCCceeEEEEeCC
Q 014222 213 VI--N-NCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY---EGKWFLKGLGSHRQVLSEAYQPE 286 (428)
Q Consensus 213 ~~--~-~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~---~g~lyv~Gg~~~~~~~i~~yd~~ 286 (428)
.+ + ..+++.|+.+ ..+.+||..+.+-...-...........+.. ++.+++.|+.+ ..+..||..
T Consensus 176 ~~~~~~~~~l~s~s~D-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d---g~v~~wd~~ 245 (344)
T 4gqb_B 176 AASPHKDSVFLSCSED-------NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN---GTVSLVDTK 245 (344)
T ss_dssp EECSSCTTEEEEEETT-------SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT---SEEEEEESC
T ss_pred EecCCCCCceeeeccc-------cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC---CcEEEEECC
Confidence 22 2 3577777764 5788999987754322111111111122222 45677777543 246788987
Q ss_pred CCCeEecCCCCcCCCC-CceEEE--CC-eEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEE-eCCeE
Q 014222 287 TDSWFPVYDGMVAGWR-NPSASL--NR-HLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVP-LNGKL 361 (428)
Q Consensus 287 ~~~W~~~~~~~~~~~~-~~~~~~--~~-~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~-~~~~l 361 (428)
+.+= +.. ...... ..++.+ ++ ++++.|+.++ .|.+||..+.+-... ....... ...... .+..|
T Consensus 246 ~~~~--~~~-~~~h~~~v~~v~fsp~g~~~lasgs~D~-~i~vwd~~~~~~~~~---~~H~~~V----~~v~~sp~~~~l 314 (344)
T 4gqb_B 246 STSC--VLS-SAVHSQCVTGLVFSPHSVPFLASLSEDC-SLAVLDSSLSELFRS---QAHRDFV----RDATWSPLNHSL 314 (344)
T ss_dssp C--C--CEE-EECCSSCEEEEEECSSSSCCEEEEETTS-CEEEECTTCCEEEEE---CCCSSCE----EEEEECSSSTTE
T ss_pred CCcE--EEE-EcCCCCCEEEEEEccCCCeEEEEEeCCC-eEEEEECCCCcEEEE---cCCCCCE----EEEEEeCCCCeE
Confidence 6541 111 111111 112333 34 5666666654 799999987753322 1111111 111222 24567
Q ss_pred EEEeCCCeEEEEEeecCCC
Q 014222 362 CIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 362 yv~GG~~~~~~v~~yd~~~ 380 (428)
++.||.+..- .+|+..+
T Consensus 315 las~s~D~~v--~~w~v~~ 331 (344)
T 4gqb_B 315 LTTVGWDHQV--VHHVVPT 331 (344)
T ss_dssp EEEEETTSCE--EEEECCC
T ss_pred EEEEcCCCeE--EEEECCC
Confidence 7788876644 4455444
No 80
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.91 E-value=0.12 Score=47.26 Aligned_cols=209 Identities=9% Similarity=0.071 Sum_probs=102.9
Q ss_pred eEEEEeCCCCceEe-CCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcce-e
Q 014222 133 SWHAFDPIYQLWQP-LPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFF-G 210 (428)
Q Consensus 133 ~~~~yd~~~~~W~~-l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~-~ 210 (428)
.+.++|..+++-.. +..-+. ...+++...+++.++.|+.+ ..+.+||..+.+-... +....... +
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~~g~~d------g~v~i~~~~~~~~~~~--~~~~~~~v~~ 169 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPV-----DAWTLAFSPDSQYLATGTHV------GKVNIFGVESGKKEYS--LDTRGKFILS 169 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTT-----CCCCEEECTTSSEEEEECTT------SEEEEEETTTCSEEEE--EECSSSCEEE
T ss_pred cEEEEECCCCCEEEEEeCCCc-----cEEEEEECCCCCEEEEEcCC------CcEEEEEcCCCceeEE--ecCCCceEEE
Confidence 67788887765322 111111 12234444333566676543 3678888877653221 11111111 1
Q ss_pred eEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEE-cCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCC
Q 014222 211 SCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF-ISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETD 288 (428)
Q Consensus 211 ~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~ 288 (428)
++. -+++.++.|+.+ ..+.+||..+.+-.. +..-..+ .......-++++.+.|+.+. .+..||..+.
T Consensus 170 ~~~spdg~~lasg~~d-------g~i~iwd~~~~~~~~~~~~h~~~-v~~l~~spd~~~l~s~s~dg---~i~iwd~~~~ 238 (321)
T 3ow8_A 170 IAYSPDGKYLASGAID-------GIINIFDIATGKLLHTLEGHAMP-IRSLTFSPDSQLLVTASDDG---YIKIYDVQHA 238 (321)
T ss_dssp EEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSC-CCEEEECTTSCEEEEECTTS---CEEEEETTTC
T ss_pred EEECCCCCEEEEEcCC-------CeEEEEECCCCcEEEEEcccCCc-eeEEEEcCCCCEEEEEcCCC---eEEEEECCCc
Confidence 222 256777777754 478999998875322 2211111 11112222667666665432 3678998776
Q ss_pred CeEecCCCCcCCCC-CceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEe
Q 014222 289 SWFPVYDGMVAGWR-NPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIR 365 (428)
Q Consensus 289 ~W~~~~~~~~~~~~-~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~G 365 (428)
.-...- ..... ...+.+ ++..++.|+.++ .|.+||..+.+-.. .+....... .......+++.++.+
T Consensus 239 ~~~~~~---~~h~~~v~~~~~sp~~~~l~s~s~D~-~v~iwd~~~~~~~~--~~~~h~~~v----~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 239 NLAGTL---SGHASWVLNVAFCPDDTHFVSSSSDK-SVKVWDVGTRTCVH--TFFDHQDQV----WGVKYNGNGSKIVSV 308 (321)
T ss_dssp CEEEEE---CCCSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTTEEEE--EECCCSSCE----EEEEECTTSSEEEEE
T ss_pred ceeEEE---cCCCCceEEEEECCCCCEEEEEeCCC-cEEEEeCCCCEEEE--EEcCCCCcE----EEEEECCCCCEEEEE
Confidence 543221 11111 112222 577777777664 79999988754322 221111111 122333456677777
Q ss_pred CCCeEEEEEeec
Q 014222 366 NNMSISLVDVSK 377 (428)
Q Consensus 366 G~~~~~~v~~yd 377 (428)
|.++. +.+||
T Consensus 309 ~~d~~--i~vwd 318 (321)
T 3ow8_A 309 GDDQE--IHIYD 318 (321)
T ss_dssp ETTCC--EEEEE
T ss_pred eCCCe--EEEEe
Confidence 76553 34555
No 81
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.88 E-value=0.064 Score=51.04 Aligned_cols=181 Identities=12% Similarity=0.142 Sum_probs=89.9
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.++|..+++...+-.+... ...-.+++...++..++.|+.++ .+.+||..+++-... +........+.
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~~~~~--~~~h~~~v~~~ 195 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRLRN--MTSHSARVGSL 195 (420)
T ss_dssp EEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEE--ECCCSSCEEEE
T ss_pred EEEEEECCCCCEEEEEEecCC--CCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCcEEEE--EeCCCCceEEE
Confidence 789999999887654333322 11123444443436777777553 588999988764322 11112222344
Q ss_pred EECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcC-CCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCC--
Q 014222 213 VINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFIS-DMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDS-- 289 (428)
Q Consensus 213 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~-~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~-- 289 (428)
..++.+.+.|+.+ ..+..+|..+....... .............-++...+.|+... .+..+|..+.+
T Consensus 196 s~~~~~l~sgs~d-------~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~---~v~i~~~~~~~~~ 265 (420)
T 4gga_A 196 SWNSYILSSGSRS-------GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN---LVNVWPSAPGEGG 265 (420)
T ss_dssp EEETTEEEEEETT-------SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS---CEEEEESSCCSSC
T ss_pred eeCCCEEEEEeCC-------CceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccc---cceEEeecccccc
Confidence 4567777777754 46778887665432211 00001111111122455555554322 34567765543
Q ss_pred eEecCCCCcCCCCCc--eEE---ECCeEEEE-EccCCcEEEEEeCCCCceee
Q 014222 290 WFPVYDGMVAGWRNP--SAS---LNRHLYAL-DCKDGCKIRVYDEVTDSWSK 335 (428)
Q Consensus 290 W~~~~~~~~~~~~~~--~~~---~~~~lyv~-gG~~~~~i~~yd~~~~~W~~ 335 (428)
+..+.. ....... +.. .+..+++. +|.....|.+||..+..-..
T Consensus 266 ~~~~~~--~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 266 WVPLQT--FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp SCCSEE--ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred ceeeee--ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce
Confidence 111111 0011111 112 14445444 55555689999998875443
No 82
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.87 E-value=0.26 Score=45.19 Aligned_cols=216 Identities=11% Similarity=0.112 Sum_probs=104.0
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCce--eeCCCCCcCCcce-
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKW--HRAPDMLRRRHFF- 209 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W--~~~~~~~~~r~~~- 209 (428)
.+.++|..+.+-...-+... ....+++...++..++.||.+ ..+.+||..+..- .....+.......
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~s~~~d------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~ 147 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRS----SWVMTCAYAPSGNYVACGGLD------NICSIYNLKTREGNVRVSRELAGHTGYLS 147 (340)
T ss_dssp EEEEEETTTCCEEEEEECSS----SCEEEEEECTTSSEEEEEETT------CEEEEEETTTCSBSCEEEEEEECCSSCEE
T ss_pred cEEEEECCCCCcceEeecCC----ccEEEEEECCCCCEEEEEeCC------CeEEEEECccCCCcceeEEEecCCCccEE
Confidence 67788877665322111111 112333333333577777754 3678888876531 1111111111111
Q ss_pred eeE-EECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCC
Q 014222 210 GSC-VINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPE 286 (428)
Q Consensus 210 ~~~-~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~ 286 (428)
.+. .-++. ++.|+.+ ..+.+||..+.+-...-.-... ....+.+ ++.+++.|+.+. .+..||..
T Consensus 148 ~~~~~~~~~-l~s~s~d-------~~i~~wd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~sg~~d~---~v~~wd~~ 214 (340)
T 1got_B 148 CCRFLDDNQ-IVTSSGD-------TTCALWDIETGQQTTTFTGHTG--DVMSLSLAPDTRLFVSGACDA---SAKLWDVR 214 (340)
T ss_dssp EEEEEETTE-EEEEETT-------SCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEETTS---CEEEEETT
T ss_pred EEEECCCCc-EEEEECC-------CcEEEEECCCCcEEEEEcCCCC--ceEEEEECCCCCEEEEEeCCC---cEEEEECC
Confidence 112 23455 4445443 5788999988754322111111 1112222 566777766432 46788987
Q ss_pred CCCeEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEE
Q 014222 287 TDSWFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCII 364 (428)
Q Consensus 287 ~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~ 364 (428)
+..-...-. .......++.+ ++.+++.|+.++ .|.+||..+.+-...-....... .........++++++.
T Consensus 215 ~~~~~~~~~--~h~~~v~~v~~~p~~~~l~s~s~d~-~v~iwd~~~~~~~~~~~~~~~~~----~v~~~~~s~~g~~l~~ 287 (340)
T 1got_B 215 EGMCRQTFT--GHESDINAICFFPNGNAFATGSDDA-TCRLFDLRADQELMTYSHDNIIC----GITSVSFSKSGRLLLA 287 (340)
T ss_dssp TCSEEEEEC--CCSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTTEEEEEECCTTCCS----CEEEEEECTTSSEEEE
T ss_pred CCeeEEEEc--CCcCCEEEEEEcCCCCEEEEEcCCC-cEEEEECCCCcEEEEEccCCccc----ceEEEEECCCCCEEEE
Confidence 765322111 00001112222 677778887664 79999988764322111010000 0112334456788888
Q ss_pred eCCCeEEEEEeecCCC
Q 014222 365 RNNMSISLVDVSKSNG 380 (428)
Q Consensus 365 GG~~~~~~v~~yd~~~ 380 (428)
|+.++ .+.+||..+
T Consensus 288 g~~d~--~i~vwd~~~ 301 (340)
T 1got_B 288 GYDDF--NCNVWDALK 301 (340)
T ss_dssp EETTS--EEEEEETTT
T ss_pred ECCCC--eEEEEEccc
Confidence 87654 366788655
No 83
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.87 E-value=0.083 Score=46.63 Aligned_cols=189 Identities=7% Similarity=-0.049 Sum_probs=97.6
Q ss_pred eEEEEeCCC-CceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceee
Q 014222 133 SWHAFDPIY-QLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGS 211 (428)
Q Consensus 133 ~~~~yd~~~-~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~ 211 (428)
.++++|..+ ++...+...... .....++...+++.+++++.... ....++.++..++.-..+..... ...+
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~---~~~~ 134 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFAT---ICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKNLP---SYWH 134 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCC---CBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSSSS---EEEE
T ss_pred eEEEEeCCCCCCceEecccccc---ccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecCCC---ccce
Confidence 789999998 777666533211 11222333323245555553221 35689999988877655543321 1222
Q ss_pred EEE-CC-EEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCC
Q 014222 212 CVI-NN-CLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDS 289 (428)
Q Consensus 212 ~~~-~~-~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~ 289 (428)
+.. ++ .|++.++.+. ...++.+|..+.....+...+... ......-+++..++++.......++.++.....
T Consensus 135 ~~spdg~~l~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~ 208 (297)
T 2ojh_A 135 GWSPDGKSFTYCGIRDQ-----VFDIYSMDIDSGVETRLTHGEGRN-DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSS 208 (297)
T ss_dssp EECTTSSEEEEEEEETT-----EEEEEEEETTTCCEEECCCSSSCE-EEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred EECCCCCEEEEEECCCC-----ceEEEEEECCCCcceEcccCCCcc-ccceECCCCCEEEEEecCCCCccEEEECCCCCC
Confidence 222 34 4554554431 135666777777766654432211 111122256544443332334557888877777
Q ss_pred eEecCCCCcCCCCCceEE--ECCeEEEEEccC----------CcEEEEEeCCCCceeeCcc
Q 014222 290 WFPVYDGMVAGWRNPSAS--LNRHLYALDCKD----------GCKIRVYDEVTDSWSKHID 338 (428)
Q Consensus 290 W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~----------~~~i~~yd~~~~~W~~v~~ 338 (428)
...+..... ....+. -+++.+++++.+ ...+++||.++.+...+..
T Consensus 209 ~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 209 VERITDSAY---GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp EEECCCCSE---EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred cEEEecCCc---ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 766643211 111122 255544444332 1469999999887766654
No 84
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.86 E-value=0.1 Score=48.12 Aligned_cols=187 Identities=11% Similarity=0.067 Sum_probs=86.1
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCc-eeeCCCCCcC-Ccce-
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNK-WHRAPDMLRR-RHFF- 209 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~-r~~~- 209 (428)
.+.+||..++++.....+... ...-.+++...++..++.|+.++ .+.+||..+.. |........+ ....
T Consensus 75 ~i~vwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~~~~~~~~~~~~~~~i~ 146 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVILRI--NRAARCVRWAPNEKKFAVGSGSR------VISICYFEQENDWWVCKHIKKPIRSTVL 146 (372)
T ss_dssp CEEEEEEETTEEEEEEECCCC--SSCEEEEEECTTSSEEEEEETTS------SEEEEEEETTTTEEEEEEECTTCCSCEE
T ss_pred eEEEEECCCCeeeeeEEeecC--CCceeEEEECCCCCEEEEEeCCC------EEEEEEecCCCcceeeeeeecccCCCee
Confidence 577788887776543222111 11123333333335677776542 45666665543 2222111111 1111
Q ss_pred eeEEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCc---------e-------EEcCCCCCCccceEEEEE--CCEEEEE
Q 014222 210 GSCVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNR---------W-------SFISDMSTAMVPFIGVVY--EGKWFLK 270 (428)
Q Consensus 210 ~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~---------W-------~~~~~~p~~~~~~~~~~~--~g~lyv~ 270 (428)
.++.. ++..++.|+.+ ..+.+||..... | ..+..+.........+.+ ++.+++.
T Consensus 147 ~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 219 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCD-------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW 219 (372)
T ss_dssp EEEECTTSSEEEEEETT-------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE
T ss_pred EEEEcCCCCEEEEEcCC-------CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEE
Confidence 22222 56667777653 478888864211 1 111111111111222222 5555555
Q ss_pred ecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCC--CceeeCccc
Q 014222 271 GLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVT--DSWSKHIDS 339 (428)
Q Consensus 271 Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~--~~W~~v~~~ 339 (428)
|+.+ ..+..||..+.+-...-.............-++.+++.| .+ ..+.+||..+ ++|..+..+
T Consensus 220 ~~~d---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d-~~i~i~~~~~~~~~~~~~~~~ 285 (372)
T 1k8k_C 220 VSHD---STVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HD-CFPVLFTYDSAAGKLSFGGRL 285 (372)
T ss_dssp EETT---TEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TT-SSCEEEEEETTTTEEEECCCC
T ss_pred EeCC---CEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eC-CeEEEEEccCcCceEEEeecc
Confidence 5432 246788887665322211111111111123467766665 33 4788888877 888776443
No 85
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.85 E-value=0.16 Score=47.54 Aligned_cols=215 Identities=8% Similarity=-0.065 Sum_probs=100.6
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCC------
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRR------ 206 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r------ 206 (428)
.+.+||........+..... .-.+++...++..++.|+.+ ..+.+||..+++....-......
T Consensus 131 ~i~i~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 131 ELRLWNKTGALLNVLNFHRA-----PIVSVKWNKDGTHIISMDVE------NVTILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp CEEEEETTSCEEEEECCCCS-----CEEEEEECTTSSEEEEEETT------CCEEEEETTTTEEEEEECCC---------
T ss_pred eEEEEeCCCCeeeeccCCCc-----cEEEEEECCCCCEEEEEecC------CeEEEEECCCCcEEEEeeccccCccceee
Confidence 57777844443333332211 12334443333566666643 25788898777644321111111
Q ss_pred --------cceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE-ECCEEEEEecCCCCc
Q 014222 207 --------HFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV-YEGKWFLKGLGSHRQ 277 (428)
Q Consensus 207 --------~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~g~lyv~Gg~~~~~ 277 (428)
....+....+..++.|+.+ ..+.+||..+.+-...-...... -..++. -++++++.|+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~i~~~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~d~-- 269 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDKFVIPGPK-------GAIFVYQITEKTPTGKLIGHHGP-ISVLEFNDTNKLLLSASDDG-- 269 (425)
T ss_dssp ------CCCBSCCEEEETTEEEEECGG-------GCEEEEETTCSSCSEEECCCSSC-EEEEEEETTTTEEEEEETTS--
T ss_pred ccccCCcceeeEEEEcCCCEEEEEcCC-------CeEEEEEcCCCceeeeeccCCCc-eEEEEECCCCCEEEEEcCCC--
Confidence 0122333333345566653 47899999876432111111111 112222 2566566655322
Q ss_pred eeEEEEeCCCCCeEecCCCCcCCCCCceEEE-CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEE
Q 014222 278 VLSEAYQPETDSWFPVYDGMVAGWRNPSASL-NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVP 356 (428)
Q Consensus 278 ~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~ 356 (428)
.+..||..+.+-...-.... ......+.. ++ +++.++.+ ..|.+||..+.+-... +....... ......
T Consensus 270 -~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~-~l~~~~~d-~~i~i~d~~~~~~~~~--~~~~~~~i----~~~~~s 339 (425)
T 1r5m_A 270 -TLRIWHGGNGNSQNCFYGHS-QSIVSASWVGDD-KVISCSMD-GSVRLWSLKQNTLLAL--SIVDGVPI----FAGRIS 339 (425)
T ss_dssp -CEEEECSSSBSCSEEECCCS-SCEEEEEEETTT-EEEEEETT-SEEEEEETTTTEEEEE--EECTTCCE----EEEEEC
T ss_pred -EEEEEECCCCccceEecCCC-ccEEEEEECCCC-EEEEEeCC-CcEEEEECCCCcEeEe--cccCCccE----EEEEEc
Confidence 36788887654222111011 111112223 45 66666655 4899999987653322 11111111 122334
Q ss_pred eCCeEEEEeCCCeEEEEEeecCCC
Q 014222 357 LNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 357 ~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.+++++++|+.++ .+.+||..+
T Consensus 340 ~~~~~l~~~~~dg--~i~i~~~~~ 361 (425)
T 1r5m_A 340 QDGQKYAVAFMDG--QVNVYDLKK 361 (425)
T ss_dssp TTSSEEEEEETTS--CEEEEECHH
T ss_pred CCCCEEEEEECCC--eEEEEECCC
Confidence 4577777777554 356777765
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.80 E-value=0.048 Score=52.20 Aligned_cols=184 Identities=9% Similarity=0.103 Sum_probs=98.1
Q ss_pred EeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCc
Q 014222 165 LSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNR 244 (428)
Q Consensus 165 ~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~ 244 (428)
.++ ..++.|+.++ .+.+||..+.+-... +........+...++.+++.|+.+ ..+.+||..+.+
T Consensus 141 ~d~-~~l~~g~~dg------~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~d-------g~i~vwd~~~~~ 204 (435)
T 1p22_A 141 YDD-QKIVSGLRDN------TIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSD-------STVRVWDVNTGE 204 (435)
T ss_dssp CCS-SEEEEEESSS------CEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETT-------SCEEEEESSSCC
T ss_pred ECC-CEEEEEeCCC------eEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCC-------CeEEEEECCCCc
Confidence 455 5777777543 588999887654322 111122223334477778888764 578999998875
Q ss_pred eEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCC-CCCceEEECCeEEEEEccCCcEE
Q 014222 245 WSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAG-WRNPSASLNRHLYALDCKDGCKI 323 (428)
Q Consensus 245 W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~-~~~~~~~~~~~lyv~gG~~~~~i 323 (428)
-... +............++..++.|+.+. .+..||..+..-.......... ....++..++..++.|+.++ .|
T Consensus 205 ~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg---~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg-~i 278 (435)
T 1p22_A 205 MLNT--LIHHCEAVLHLRFNNGMMVTCSKDR---SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR-TI 278 (435)
T ss_dssp EEEE--ECCCCSCEEEEECCTTEEEEEETTS---CEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTS-EE
T ss_pred EEEE--EcCCCCcEEEEEEcCCEEEEeeCCC---cEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCC-eE
Confidence 4322 1111112233334555555555432 4678888765422110101111 11123445777777777654 89
Q ss_pred EEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 324 RVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 324 ~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.+||..+.+-.. .+.... .....+..++.+++.|+.++ .+.+||..+
T Consensus 279 ~vwd~~~~~~~~--~~~~~~------~~v~~~~~~~~~l~~g~~dg--~i~iwd~~~ 325 (435)
T 1p22_A 279 KVWNTSTCEFVR--TLNGHK------RGIACLQYRDRLVVSGSSDN--TIRLWDIEC 325 (435)
T ss_dssp EEEETTTCCEEE--EEECCS------SCEEEEEEETTEEEEEETTS--CEEEEETTT
T ss_pred EEEECCcCcEEE--EEcCCC------CcEEEEEeCCCEEEEEeCCC--eEEEEECCC
Confidence 999998764322 221111 11333444667777777554 356778765
No 87
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.80 E-value=0.29 Score=44.62 Aligned_cols=213 Identities=14% Similarity=0.076 Sum_probs=114.5
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCC----CceeeC-C-CCCcC
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSART----NKWHRA-P-DMLRR 205 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t----~~W~~~-~-~~~~~ 205 (428)
.+..+|+.+.+...+.+.. ..-.+++.. .++.||+... ....++++++.+ ..-..+ + .+..+
T Consensus 11 ~I~~i~~~~~~~~~~~~~~-----~~p~g~~~d~~~~~ly~~D~------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPNL-----RNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp SEEEEETTSCCCEEEECSC-----SSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECSSCSCC
T ss_pred eEEEEECCCcceEehhcCC-----CceEEEEEEeCCCEEEEEEC------CCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 5778888887665542211 123455554 2338999843 234789999876 222221 1 11222
Q ss_pred CcceeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcC--CCCCCccceEEEE--ECCEEEEEecCCCCcee
Q 014222 206 RHFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFIS--DMSTAMVPFIGVV--YEGKWFLKGLGSHRQVL 279 (428)
Q Consensus 206 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~~~~~~~~~--~~g~lyv~Gg~~~~~~~ 279 (428)
.++++ .++.||+.-.. ...+.++|+....-+.+. .+..+ ..+++ .++.||+..... ...
T Consensus 80 ---~glavd~~~~~ly~~d~~-------~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~--~~~ 144 (316)
T 1ijq_A 80 ---DGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT--PAK 144 (316)
T ss_dssp ---CEEEEETTTTEEEEEETT-------TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS--SCE
T ss_pred ---CEEEEeecCCeEEEEECC-------CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC--CCe
Confidence 23444 47899997432 268899998765433332 22211 23333 378999985321 235
Q ss_pred EEEEeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEe
Q 014222 280 SEAYQPETDSWFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPL 357 (428)
Q Consensus 280 i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~ 357 (428)
++++++....-+.+... ....-.+.++- +++||+..... ..|+++|.+...-+.+.........+ .+++..
T Consensus 145 I~~~~~dG~~~~~~~~~-~~~~P~gla~d~~~~~lY~~D~~~-~~I~~~d~dg~~~~~~~~~~~~~~~P-----~giav~ 217 (316)
T 1ijq_A 145 IKKGGLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKL-HSISSIDVNGGNRKTILEDEKRLAHP-----FSLAVF 217 (316)
T ss_dssp EEEEETTSCCEEEEECS-SCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCSCEEEEECTTTTSSE-----EEEEEE
T ss_pred EEEEcCCCCCeEEEEEC-CCCCceEEEEeccCCEEEEEECCC-CeEEEEecCCCceEEEeecCCccCCc-----EEEEEE
Confidence 88998865443333211 11111123332 68999998544 58999999864433332211112222 455667
Q ss_pred CCeEEEEeCCCeEEEEEeecCCC
Q 014222 358 NGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 358 ~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
++.||+.-... ..|..+|+.+
T Consensus 218 ~~~ly~~d~~~--~~V~~~~~~~ 238 (316)
T 1ijq_A 218 EDKVFWTDIIN--EAIFSANRLT 238 (316)
T ss_dssp TTEEEEEETTT--TEEEEEETTT
T ss_pred CCEEEEEECCC--CeEEEEeCCC
Confidence 89999986432 3567777654
No 88
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.79 E-value=0.3 Score=44.53 Aligned_cols=194 Identities=9% Similarity=-0.043 Sum_probs=98.3
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCC-----ccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEEC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEY-----SEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSA 191 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~-----~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~ 191 (428)
+..+|+.... ...+.+||+.+++-...-+.+... .+..-.+++.. ++..+|+.+... ...++++|+
T Consensus 100 g~~l~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~ 171 (353)
T 3vgz_A 100 TQTLWFGNTV---NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDG 171 (353)
T ss_dssp TTEEEEEETT---TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEET
T ss_pred CCEEEEEecC---CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcC
Confidence 3456666532 237889999887743211111100 00011334443 344677765321 346999999
Q ss_pred CCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCC-CC-Cccc-eEEEEE--C
Q 014222 192 RTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDM-ST-AMVP-FIGVVY--E 264 (428)
Q Consensus 192 ~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~-p~-~~~~-~~~~~~--~ 264 (428)
.+.+-...-+.. ......++.. ++.+|+... ...+.+||+.+.+-...-.. .. +... ..++.. +
T Consensus 172 ~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 242 (353)
T 3vgz_A 172 GNIKLKTAIQNT-GKMSTGLALDSEGKRLYTTNA--------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTAR 242 (353)
T ss_dssp TTTEEEEEECCC-CTTCCCCEEETTTTEEEEECT--------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTT
T ss_pred CCCceEEEecCC-CCccceEEECCCCCEEEEEcC--------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCC
Confidence 887643321111 1111222332 346777543 15788999988754322211 11 1111 222332 4
Q ss_pred CEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceE-EECC-eEEEEEccCCcEEEEEeCCCCceee
Q 014222 265 GKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSA-SLNR-HLYALDCKDGCKIRVYDEVTDSWSK 335 (428)
Q Consensus 265 g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~-~lyv~gG~~~~~i~~yd~~~~~W~~ 335 (428)
+.+|+.... ...+..||+.+.+......... . ...+ .-++ .+|+.+..+ ..|.+||..+.+...
T Consensus 243 ~~l~~~~~~---~~~v~~~d~~~~~~~~~~~~~~-~--~~~~~s~dg~~l~v~~~~~-~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 243 QRAFITDSK---AAEVLVVDTRNGNILAKVAAPE-S--LAVLFNPARNEAYVTHRQA-GKVSVIDAKSYKVVK 308 (353)
T ss_dssp TEEEEEESS---SSEEEEEETTTCCEEEEEECSS-C--CCEEEETTTTEEEEEETTT-TEEEEEETTTTEEEE
T ss_pred CEEEEEeCC---CCEEEEEECCCCcEEEEEEcCC-C--ceEEECCCCCEEEEEECCC-CeEEEEECCCCeEEE
Confidence 457776532 2357899998877543322111 1 1222 2244 477776443 589999998876543
No 89
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.78 E-value=0.16 Score=47.91 Aligned_cols=215 Identities=7% Similarity=-0.048 Sum_probs=101.9
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEE-EeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceee
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAV-LSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGS 211 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~-~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~ 211 (428)
.+.+||..+.+- ...+... ......+. .++ ..++.|+.++ .+.+||..+++-...-.... ..-.++
T Consensus 79 ~v~i~d~~~~~~--~~~~~~~---~~~~~~~~~~~~-~~l~~~~~dg------~i~iwd~~~~~~~~~~~~h~-~~v~~~ 145 (420)
T 3vl1_A 79 HDFLFNTIIRDG--SKMLKRA---DYTAVDTAKLQM-RRFILGTTEG------DIKVLDSNFNLQREIDQAHV-SEITKL 145 (420)
T ss_dssp EEEEEECCSEET--TTTSCSC---CEEEEEEECSSS-CEEEEEETTS------CEEEECTTSCEEEEETTSSS-SCEEEE
T ss_pred cEEEEEecccce--eeEEecC---CceEEEEEecCC-CEEEEEECCC------CEEEEeCCCcceeeeccccc-CccEEE
Confidence 678888766432 2122211 11111122 244 5777776542 58889988765443321111 111122
Q ss_pred EEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceE-EcCCCCCCccceEEEEE-CCEEEEEecCCCCceeEEEEeCCCC
Q 014222 212 CVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWS-FISDMSTAMVPFIGVVY-EGKWFLKGLGSHRQVLSEAYQPETD 288 (428)
Q Consensus 212 ~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~-~~~~~p~~~~~~~~~~~-~g~lyv~Gg~~~~~~~i~~yd~~~~ 288 (428)
+.. ++++++.|+.+ ..+.+||..+.+-. .+... ...-..++.. ++++++.|+.+. .+..||..+.
T Consensus 146 ~~~~~~~~l~s~s~d-------~~i~iwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~~~d~---~v~iwd~~~~ 213 (420)
T 3vl1_A 146 KFFPSGEALISSSQD-------MQLKIWSVKDGSNPRTLIGH--RATVTDIAIIDRGRNVLSASLDG---TIRLWECGTG 213 (420)
T ss_dssp EECTTSSEEEEEETT-------SEEEEEETTTCCCCEEEECC--SSCEEEEEEETTTTEEEEEETTS---CEEEEETTTT
T ss_pred EECCCCCEEEEEeCC-------CeEEEEeCCCCcCceEEcCC--CCcEEEEEEcCCCCEEEEEcCCC---cEEEeECCCC
Confidence 222 56666667654 57899998765321 11111 1111122222 566555655332 3678888766
Q ss_pred CeEec-CCCCcCCCC-----------------------CceEEECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccC
Q 014222 289 SWFPV-YDGMVAGWR-----------------------NPSASLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLG 344 (428)
Q Consensus 289 ~W~~~-~~~~~~~~~-----------------------~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~ 344 (428)
+-... ......... .....-++++++.|+.++ .|.+||..+..-... +.....
T Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-~i~i~d~~~~~~~~~--~~~~~~ 290 (420)
T 3vl1_A 214 TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG-VITVHNVFSKEQTIQ--LPSKFT 290 (420)
T ss_dssp EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS-CEEEEETTTCCEEEE--ECCTTS
T ss_pred ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC-eEEEEECCCCceeEE--cccccC
Confidence 43221 110000000 001112567777776654 799999887642221 111110
Q ss_pred CcccccceEEEEeCCe-EEEEeCCCeEEEEEeecCCC
Q 014222 345 NSRALEAAALVPLNGK-LCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 345 ~~~~~~~~~~~~~~~~-lyv~GG~~~~~~v~~yd~~~ 380 (428)
.. ........++. +++.|+.++ .+.+||..+
T Consensus 291 ~~---v~~~~~~~~~~~~l~~g~~dg--~i~vwd~~~ 322 (420)
T 3vl1_A 291 CS---CNSLTVDGNNANYIYAGYENG--MLAQWDLRS 322 (420)
T ss_dssp SC---EEEEEECSSCTTEEEEEETTS--EEEEEETTC
T ss_pred CC---ceeEEEeCCCCCEEEEEeCCC--eEEEEEcCC
Confidence 01 11222333454 777777654 466788776
No 90
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.78 E-value=0.082 Score=48.08 Aligned_cols=236 Identities=10% Similarity=-0.046 Sum_probs=111.8
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCce-E-eCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLW-Q-PLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTN 194 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W-~-~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 194 (428)
+..+|+.+.. ...++.+|+.+++. . .+..... ..++++.. ++..+| .+...+ ....+.+||..++
T Consensus 51 g~~l~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~-~~~~~~---~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 51 CSNVVVTSDF---CQTLVQIETQLEPPKVVAIQEGQS-----SMADVDITPDDQFAV-TVTGLN---HPFNMQSYSFLKN 118 (331)
T ss_dssp SCEEEEEEST---TCEEEEEECSSSSCEEEEEEECSS-----CCCCEEECTTSSEEE-ECCCSS---SSCEEEEEETTTT
T ss_pred CCEEEEEeCC---CCeEEEEECCCCceeEEecccCCC-----CccceEECCCCCEEE-EecCCC---CcccEEEEECCCC
Confidence 4457776632 23789999988774 2 2221111 12323433 343566 322110 1237999999888
Q ss_pred ceeeCCCCCcCCcceeeEEE-CC-EEEEEccccCCCCCCCCe-EEEEeCCCCce-EEc--CCCCCCccceEEEE-ECCE-
Q 014222 195 KWHRAPDMLRRRHFFGSCVI-NN-CLYVAGGENGGVHRSLRS-AEVYDPNKNRW-SFI--SDMSTAMVPFIGVV-YEGK- 266 (428)
Q Consensus 195 ~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~-v~~yd~~t~~W-~~~--~~~p~~~~~~~~~~-~~g~- 266 (428)
+....-+ .......++.- ++ .+|+.+... .. +.+||...+.- ... ..++.......++. -+|+
T Consensus 119 ~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~ 189 (331)
T 3u4y_A 119 KFISTIP--IPYDAVGIAISPNGNGLILIDRSS-------ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNF 189 (331)
T ss_dssp EEEEEEE--CCTTEEEEEECTTSSCEEEEEETT-------TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSE
T ss_pred CeEEEEE--CCCCccceEECCCCCEEEEEecCC-------CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCE
Confidence 7544321 11122333332 44 577775532 34 77777654321 000 01111111122222 2554
Q ss_pred EEEEecCCCCceeEEEEeCCCCCe-EecCCCCcCCCCCceEE-ECCe-EEEEEccCCcEEEEEeCCCCceeeCccccccc
Q 014222 267 WFLKGLGSHRQVLSEAYQPETDSW-FPVYDGMVAGWRNPSAS-LNRH-LYALDCKDGCKIRVYDEVTDSWSKHIDSKMHL 343 (428)
Q Consensus 267 lyv~Gg~~~~~~~i~~yd~~~~~W-~~~~~~~~~~~~~~~~~-~~~~-lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~ 343 (428)
+|+.+.. ...+..||+.+.+. +.+...+....-...+. -+++ ||+... ....|.+||+++.+.+.+...+...
T Consensus 190 l~v~~~~---~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~~~~i~~~d~~~~~~~~~~~~~~~~ 265 (331)
T 3u4y_A 190 AFVANLI---GNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTE-STVDVFNFNQLSGTLSFVKSFGHGL 265 (331)
T ss_dssp EEEEETT---TTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECS-SEEEEEEEETTTTEEEEEEEEECCC
T ss_pred EEEEeCC---CCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEc-CCCEEEEEECCCCceeeeccccccc
Confidence 7777532 22478899987765 11111111111112222 2555 666654 3357999999998875554433221
Q ss_pred ---CCcccccceEEEEeC-CeEEEEeCCCeEEEEEeecCCC
Q 014222 344 ---GNSRALEAAALVPLN-GKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 344 ---~~~~~~~~~~~~~~~-~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+.............+ ..||+.+.... .+.+||..+
T Consensus 266 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~--~v~v~d~~~ 304 (331)
T 3u4y_A 266 LIDPRPLFGANQMALNKTETKLFISANISR--ELKVFTISG 304 (331)
T ss_dssp CCCCGGGTTCCCEEECTTSSEEEEEETTTT--EEEEEETTS
T ss_pred ccCCCCcccccceEECCCCCEEEEecCCCC--cEEEEEecC
Confidence 111000011233334 45777665433 467888877
No 91
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.77 E-value=0.034 Score=51.24 Aligned_cols=185 Identities=9% Similarity=-0.002 Sum_probs=90.5
Q ss_pred ceEEEEECCCCceeeCCCCCcCCcceeeE-EECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCC-CccceEEE
Q 014222 184 RRVIFYSARTNKWHRAPDMLRRRHFFGSC-VINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMST-AMVPFIGV 261 (428)
Q Consensus 184 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~-~~~~~~~~ 261 (428)
-.++.+|..++++..+........-..++ .-+++||+.+.... ...+.+||..+.+++.+..... ......++
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~-----~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDD-----EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETT-----EEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCC-----CceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 45777888888877643222111111122 23678888765311 2578999998887766553211 11112223
Q ss_pred -EECCE-EEEEecCCCCceeEEEEeCC-CCCeEecCCCCcC------C--C-CCceEEE--CCeEEEEEccCCcEEEEEe
Q 014222 262 -VYEGK-WFLKGLGSHRQVLSEAYQPE-TDSWFPVYDGMVA------G--W-RNPSASL--NRHLYALDCKDGCKIRVYD 327 (428)
Q Consensus 262 -~~~g~-lyv~Gg~~~~~~~i~~yd~~-~~~W~~~~~~~~~------~--~-~~~~~~~--~~~lyv~gG~~~~~i~~yd 327 (428)
.-+|+ ||+.+... ..+..||.. +.+.+.+...... + . ....+.+ ++++|+.+.. ...+.+||
T Consensus 93 ~spdg~~l~~~~~~~---~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-~~~v~~~~ 168 (347)
T 3hfq_A 93 VDEARQLVYSANYHK---GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-SDKVYVYN 168 (347)
T ss_dssp EETTTTEEEEEETTT---TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-TTEEEEEE
T ss_pred ECCCCCEEEEEeCCC---CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-CCEEEEEE
Confidence 33554 66665321 235677764 3343333211100 0 0 0112333 6777776543 35899999
Q ss_pred CC-CCceeeCcccccccCCcccccceEEEEeCCe-EEEEeCCCeEEEEEeecCCC
Q 014222 328 EV-TDSWSKHIDSKMHLGNSRALEAAALVPLNGK-LCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 328 ~~-~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~-lyv~GG~~~~~~v~~yd~~~ 380 (428)
.+ +.+...+.......+.. ..+.++..+++ ||+.+.......++.++..+
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~---p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFG---PRHLVFSPDGQYAFLAGELSSQIASLKYDTQT 220 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCC---EEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred ECCCCcEEEeeeEEcCCCCC---CceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 87 55555443222111111 11233444555 88876555444445555434
No 92
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.73 E-value=0.036 Score=52.39 Aligned_cols=148 Identities=11% Similarity=0.077 Sum_probs=76.0
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCC-CCcCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceE
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPD-MLRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWS 246 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~-~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~ 246 (428)
.+++.|+.++ .+.+||..+++....-. ......-.+++.. ++..++.|+.+ ..+.+||+.+.+-.
T Consensus 145 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 145 NVLLSAGCDN------VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-------KRVRVIEPRKGTVV 211 (402)
T ss_dssp TEEEEEETTS------CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-------SEEEEEETTTTEEE
T ss_pred CEEEEEcCCC------EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-------CcEEEEeCCCCcee
Confidence 4777776543 58899998876543210 0111111122222 56667777653 58999999887543
Q ss_pred EcC-CCCC-CccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCe--EecCCCCcCCCCCceEE--ECC-eEEEEEccC
Q 014222 247 FIS-DMST-AMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSW--FPVYDGMVAGWRNPSAS--LNR-HLYALDCKD 319 (428)
Q Consensus 247 ~~~-~~p~-~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W--~~~~~~~~~~~~~~~~~--~~~-~lyv~gG~~ 319 (428)
..- .... ......+..-++++++.|........+..||..+..- .... .........+. -++ .|++.|+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~g~~d 289 (402)
T 2aq5_A 212 AEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQE--LDTSSGVLLPFFDPDTNIVYLCGKGD 289 (402)
T ss_dssp EEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEE--CCCCSSCEEEEEETTTTEEEEEETTC
T ss_pred eeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEe--ccCCCceeEEEEcCCCCEEEEEEcCC
Confidence 221 1111 1122223334778777774323344678999876542 1111 00011111222 234 455566544
Q ss_pred CcEEEEEeCCCCc
Q 014222 320 GCKIRVYDEVTDS 332 (428)
Q Consensus 320 ~~~i~~yd~~~~~ 332 (428)
..|.+||..+.+
T Consensus 290 -g~i~i~d~~~~~ 301 (402)
T 2aq5_A 290 -SSIRYFEITSEA 301 (402)
T ss_dssp -SCEEEEEECSST
T ss_pred -CeEEEEEecCCC
Confidence 479999988765
No 93
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.73 E-value=0.14 Score=53.11 Aligned_cols=216 Identities=11% Similarity=0.023 Sum_probs=114.3
Q ss_pred EEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcC-CcceeeE
Q 014222 134 WHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRR-RHFFGSC 212 (428)
Q Consensus 134 ~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~-r~~~~~~ 212 (428)
+.+||+.++++..... +.......-++++...++.|++ |.. ..-+++||+.+++++.......+ ..-.+++
T Consensus 385 l~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~d~~g~lWi-gt~------~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~ 456 (781)
T 3v9f_A 385 INVFENGKRVAIYNKE-NRELLSNSVLCSLKDSEGNLWF-GTY------LGNISYYNTRLKKFQIIELEKNELLDVRVFY 456 (781)
T ss_dssp EEEEETTEEEEECC------CCCSBEEEEEECTTSCEEE-EET------TEEEEEECSSSCEEEECCSTTTCCCCEEEEE
T ss_pred EEEEECCCCeEEEccC-CCCCCCcceEEEEECCCCCEEE-Eec------cCCEEEEcCCCCcEEEeccCCCCCCeEEEEE
Confidence 6778887776665421 1111111223333332335776 321 23688999999998877532111 1112222
Q ss_pred EE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCC-C--ccceEEEE--ECCEEEEEecCCCCceeEEEEeCC
Q 014222 213 VI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMST-A--MVPFIGVV--YEGKWFLKGLGSHRQVLSEAYQPE 286 (428)
Q Consensus 213 ~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~-~--~~~~~~~~--~~g~lyv~Gg~~~~~~~i~~yd~~ 286 (428)
.. ++.|++... ..+.+||+.+++|+.....+. . ........ -+|.|++.... .-+.+||+.
T Consensus 457 ~d~~g~lwigt~---------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~----~Gl~~~~~~ 523 (781)
T 3v9f_A 457 EDKNKKIWIGTH---------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG----GGVGIYTPD 523 (781)
T ss_dssp ECTTSEEEEEET---------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS----SCEEEECTT
T ss_pred ECCCCCEEEEEC---------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC----CCEEEEeCC
Confidence 22 467777421 368899999998877653321 0 11111222 26788875421 126789999
Q ss_pred CCCeEecCCCCcCCCCC-ceEE--ECCeEEEEEccCCcEE-EEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEE
Q 014222 287 TDSWFPVYDGMVAGWRN-PSAS--LNRHLYALDCKDGCKI-RVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLC 362 (428)
Q Consensus 287 ~~~W~~~~~~~~~~~~~-~~~~--~~~~lyv~gG~~~~~i-~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~ly 362 (428)
+++++............ .++. -+|.|++... ..+ ..||++++++...... ...+... ....+...+|.|+
T Consensus 524 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~---~Glv~~~d~~~~~~~~~~~~-~gl~~~~--i~~i~~d~~g~lW 597 (781)
T 3v9f_A 524 MQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG---EGLVCFPSARNFDYQVFQRK-EGLPNTH--IRAISEDKNGNIW 597 (781)
T ss_dssp CCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET---TEEEEESCTTTCCCEEECGG-GTCSCCC--CCEEEECSSSCEE
T ss_pred CCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC---CCceEEECCCCCcEEEcccc-CCCCCce--EEEEEECCCCCEE
Confidence 99888765311111111 1222 2578887653 357 9999999988766431 1111110 1122333467888
Q ss_pred EEeCCCeEEEEEeecCCC
Q 014222 363 IIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 363 v~GG~~~~~~v~~yd~~~ 380 (428)
+.+. .+ +..||+.+
T Consensus 598 ~~t~-~G---l~~~~~~~ 611 (781)
T 3v9f_A 598 ASTN-TG---ISCYITSK 611 (781)
T ss_dssp EECS-SC---EEEEETTT
T ss_pred EEcC-Cc---eEEEECCC
Confidence 8653 33 55788877
No 94
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.70 E-value=0.21 Score=46.60 Aligned_cols=109 Identities=16% Similarity=0.084 Sum_probs=55.7
Q ss_pred CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCC---C-CCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCC
Q 014222 215 NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDM---S-TAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETD 288 (428)
Q Consensus 215 ~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~---p-~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~ 288 (428)
++ +++.|+.+ ..+.+||..+.+-...-.. . ..........+ ++++++.|+.......+..||..+.
T Consensus 197 ~~-~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 197 RG-LIATGFNN-------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp TS-EEEEECTT-------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC
T ss_pred Cc-eEEEEeCC-------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 45 66666643 5789999987654322111 1 00112222222 5666666654322245789998776
Q ss_pred CeEec-CCCCc----------CCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCc
Q 014222 289 SWFPV-YDGMV----------AGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 289 ~W~~~-~~~~~----------~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
+-... ..... .......+.+ ++.+++.|+.++ .|.+||..+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~ 324 (397)
T 1sq9_A 269 ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG-KLRFWDVKTKE 324 (397)
T ss_dssp CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS-EEEEEETTTTE
T ss_pred cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC-eEEEEEcCCCc
Confidence 43221 11000 0111112233 577777777554 89999998764
No 95
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.68 E-value=0.099 Score=47.98 Aligned_cols=105 Identities=13% Similarity=0.021 Sum_probs=53.9
Q ss_pred eEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEe-CCEEEEEeeeCCCCCCCceEEEEECCCCceee
Q 014222 120 WIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLS-GCHLYLFGGKDPLKGSMRRVIFYSARTNKWHR 198 (428)
Q Consensus 120 ~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 198 (428)
.+++.|+.. ..+.+||..+++-... +... ...-.+++... +..+++.|+.++ .+.+||..+++-..
T Consensus 86 ~~l~~~~~d---g~i~v~d~~~~~~~~~--~~~~--~~~i~~~~~~~~~~~~l~s~~~dg------~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 86 PLLAVAGSR---GIIRIINPITMQCIKH--YVGH--GNAINELKFHPRDPNLLLSVSKDH------ALRLWNIQTDTLVA 152 (366)
T ss_dssp EEEEEEETT---CEEEEECTTTCCEEEE--EESC--CSCEEEEEECSSCTTEEEEEETTS------CEEEEETTTTEEEE
T ss_pred CEEEEecCC---CEEEEEEchhceEeee--ecCC--CCcEEEEEECCCCCCEEEEEeCCC------eEEEEEeecCeEEE
Confidence 445555422 2688899887653221 1111 01122333332 335777777543 58899998776433
Q ss_pred C-CCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCc
Q 014222 199 A-PDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNR 244 (428)
Q Consensus 199 ~-~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~ 244 (428)
. ..+...........+ ++..++.|+.+ ..+.+||..+.+
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~ 194 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGMD-------HSLKLWRINSKR 194 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEETT-------SCEEEEESCSHH
T ss_pred EecccccccCceeEEEECCCCCEEEEecCC-------CCEEEEECCCCc
Confidence 2 111111222222222 45666667653 478899988653
No 96
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.67 E-value=0.14 Score=46.64 Aligned_cols=156 Identities=8% Similarity=0.038 Sum_probs=75.1
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCce
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKW 196 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 196 (428)
++.+|+.++. ...+.++|+.+++....-..+.. .....++.. ++..+|+.+.. ...+++||+.+++-
T Consensus 10 ~~~~~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 10 GHEYMIVTNY---PNNLHVVDVASDTVYKSCVMPDK---FGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCKN 77 (349)
T ss_dssp TCEEEEEEET---TTEEEEEETTTTEEEEEEECSSC---CSSCEEEECTTSSEEEEEETT------TTEEEEEETTTTEE
T ss_pred CCEEEEEeCC---CCeEEEEECCCCcEEEEEecCCC---CCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCCcE
Confidence 5667777643 24788999998875432222220 012344444 34357777532 34799999988865
Q ss_pred eeCCCCCc-----CCcceeeEEE-CC-EEEEEcccc----CCCCCCCCeEEEEeCCCCceEE-cCCCCCCccceEE-EEE
Q 014222 197 HRAPDMLR-----RRHFFGSCVI-NN-CLYVAGGEN----GGVHRSLRSAEVYDPNKNRWSF-ISDMSTAMVPFIG-VVY 263 (428)
Q Consensus 197 ~~~~~~~~-----~r~~~~~~~~-~~-~iyv~GG~~----~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~~~~~~~-~~~ 263 (428)
...-..+. ...-..++.- ++ .+|+.+... .........+.+||+.+.+-.. +.....+.....+ ..-
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 157 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECC
Confidence 43211111 0111122222 44 566554210 0000112589999988743211 1111111111122 223
Q ss_pred CCEEEEEecCCCCceeEEEEeCCCCCeE
Q 014222 264 EGKWFLKGLGSHRQVLSEAYQPETDSWF 291 (428)
Q Consensus 264 ~g~lyv~Gg~~~~~~~i~~yd~~~~~W~ 291 (428)
+|++|+.++ .+..||+.+.+-.
T Consensus 158 dg~l~~~~~------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 158 DGSLYVAGP------DIYKMDVKTGKYT 179 (349)
T ss_dssp TSCEEEESS------SEEEECTTTCCEE
T ss_pred CCcEEEccC------cEEEEeCCCCcee
Confidence 677777432 1678888776543
No 97
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.67 E-value=0.13 Score=53.45 Aligned_cols=215 Identities=9% Similarity=0.008 Sum_probs=104.4
Q ss_pred eEEEEeCCCCceEe-CCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceee
Q 014222 133 SWHAFDPIYQLWQP-LPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGS 211 (428)
Q Consensus 133 ~~~~yd~~~~~W~~-l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~ 211 (428)
.+.+||..+++... +..... .-.+++...++..+++|+.+ ..+.+||..+++....-...... -..+
T Consensus 36 ~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~~-v~~~ 103 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQVTET-----PVRAGKFIARKNWIIVGSDD------FRIRVFNYNTGEKVVDFEAHPDY-IRSI 103 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSS-----CEEEEEEEGGGTEEEEEETT------SEEEEEETTTCCEEEEEECCSSC-EEEE
T ss_pred EEEEEECCCCceEEEEecCCC-----cEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEecCCCC-EEEE
Confidence 68889988765432 211111 12233333333567777653 36899998887654321111111 1112
Q ss_pred EE-ECCEEEEEccccCCCCCCCCeEEEEeCCCC-ceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCC
Q 014222 212 CV-INNCLYVAGGENGGVHRSLRSAEVYDPNKN-RWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPET 287 (428)
Q Consensus 212 ~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~-~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~ 287 (428)
+. -++..++.|+.+ ..+.+||..++ .....-... ...-..++.. ++.+++.|+.+ ..+..||..+
T Consensus 104 ~~s~~~~~l~~~~~d-------g~i~vw~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~~d---g~v~vwd~~~ 172 (814)
T 3mkq_A 104 AVHPTKPYVLSGSDD-------LTVKLWNWENNWALEQTFEGH-EHFVMCVAFNPKDPSTFASGCLD---RTVKVWSLGQ 172 (814)
T ss_dssp EECSSSSEEEEEETT-------SEEEEEEGGGTSEEEEEEECC-SSCEEEEEEETTEEEEEEEEETT---SEEEEEETTC
T ss_pred EEeCCCCEEEEEcCC-------CEEEEEECCCCceEEEEEcCC-CCcEEEEEEEcCCCCEEEEEeCC---CeEEEEECCC
Confidence 22 245555566643 57889998776 222211111 1111222222 45666666543 2467888865
Q ss_pred CCeEecCCCCcCCCCCceEEE----CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEE
Q 014222 288 DSWFPVYDGMVAGWRNPSASL----NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCI 363 (428)
Q Consensus 288 ~~W~~~~~~~~~~~~~~~~~~----~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv 363 (428)
..-........ ......+.+ ++.++++|+.++ .|.+||..+.+-.. .+....... .......++.+++
T Consensus 173 ~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~dg-~i~~~d~~~~~~~~--~~~~~~~~v----~~~~~~~~~~~l~ 244 (814)
T 3mkq_A 173 STPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDL-TIKIWDYQTKSCVA--TLEGHMSNV----SFAVFHPTLPIII 244 (814)
T ss_dssp SSCSEEEECCC-TTCCCEEEECCSTTCCEEEEECTTS-EEEEEETTTTEEEE--EEECCSSCE----EEEEECSSSSEEE
T ss_pred CcceeEEecCC-CCCEEEEEEEECCCCCEEEEEeCCC-EEEEEECCCCcEEE--EEcCCCCCE----EEEEEcCCCCEEE
Confidence 54221111011 011122222 677777777654 89999987765322 111111111 1233444566777
Q ss_pred EeCCCeEEEEEeecCCC
Q 014222 364 IRNNMSISLVDVSKSNG 380 (428)
Q Consensus 364 ~GG~~~~~~v~~yd~~~ 380 (428)
.|+.++ .+.+||..+
T Consensus 245 ~~~~dg--~v~vwd~~~ 259 (814)
T 3mkq_A 245 SGSEDG--TLKIWNSST 259 (814)
T ss_dssp EEETTS--CEEEEETTT
T ss_pred EEeCCC--eEEEEECCC
Confidence 776544 245667655
No 98
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.66 E-value=0.037 Score=51.19 Aligned_cols=192 Identities=10% Similarity=0.087 Sum_probs=98.0
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcC-CcceeeEEE--CCEEEEEccccCCCCCCCCeEEEE
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRR-RHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVY 238 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~y 238 (428)
++...++.+++.||.++ .+.+||..++.|.....+... ......+.+ +++.++.|+.+ ..+.+|
T Consensus 22 l~~sp~g~~las~~~D~------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-------~~v~iw 88 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDR------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-------ATTCIW 88 (345)
T ss_dssp EEECTTSSCEEEEETTS------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-------SCEEEE
T ss_pred EEECCCCCEEEEEcCCC------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-------CcEEEE
Confidence 33333336777777553 577888887776532221111 111112222 56677777764 467888
Q ss_pred eCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCC-eEecCCCCcCCCCCceEEE--CCeEE
Q 014222 239 DPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDS-WFPVYDGMVAGWRNPSASL--NRHLY 313 (428)
Q Consensus 239 d~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~-W~~~~~~~~~~~~~~~~~~--~~~ly 313 (428)
|..+..+..+..+.........+.. ++++.+.|+.+. .+..||..+.. +..+............+.. ++.++
T Consensus 89 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~---~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK---SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp EECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS---CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred EccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC---eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 8887766544333221112222222 566666665432 35677776542 3322211110111112222 56777
Q ss_pred EEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEE
Q 014222 314 ALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVD 374 (428)
Q Consensus 314 v~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~ 374 (428)
+.|+.++ .|.+||..++.|..+..+....... .......+++.++.|+.+..-.++
T Consensus 166 ~s~s~d~-~i~~w~~~~~~~~~~~~~~~h~~~v----~~l~~sp~g~~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 166 ASASYDD-TVKLYREEEDDWVCCATLEGHESTV----WSLAFDPSGQRLASCSDDRTVRIW 221 (345)
T ss_dssp EEEETTS-CEEEEEEETTEEEEEEEECCCSSCE----EEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEeCCC-cEEEEEecCCCEEEEEEecCCCCce----EEEEECCCCCEEEEEeCCCeEEEe
Confidence 7777664 7999999988887655443222111 122334467777778766644333
No 99
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.65 E-value=0.38 Score=43.91 Aligned_cols=224 Identities=9% Similarity=0.031 Sum_probs=114.7
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCC--ceeeCCCC------Cc
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTN--KWHRAPDM------LR 204 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~~------~~ 204 (428)
.+.++|+.+++......... ...-.++++..++++|+.... ...+.+||+..+ .-..+... ..
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~---~~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~ 140 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNL---FYLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLILGRSMQPGSDQN 140 (329)
T ss_dssp CEEEECTTTCCEEEEECTTT---CSSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEESBTTBCCCSTT
T ss_pred cEEEEECCCCeEEeccCCCc---cCCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEecccCCCCCCcc
Confidence 68899998777543211110 012345666544479987532 347899998665 22222211 00
Q ss_pred CC-cceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCC-------CCCcc-ceEEEEE-C-CEEEEEe
Q 014222 205 RR-HFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDM-------STAMV-PFIGVVY-E-GKWFLKG 271 (428)
Q Consensus 205 ~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~-------p~~~~-~~~~~~~-~-g~lyv~G 271 (428)
.. .-.++++- ++.||+..+.. ...+.+||+....-..+... +.... ...+++- + +.||+..
T Consensus 141 ~~~~P~~ia~~~~~g~lyv~d~~~------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d 214 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTGAVFVSDGYC------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD 214 (329)
T ss_dssp CCSSEEEEEECTTTCCEEEEECSS------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE
T ss_pred ccCCCcEEEEeCCCCeEEEEeCCC------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE
Confidence 11 11234443 68999987532 26899999765544433311 11111 1233332 4 8999986
Q ss_pred cCCCCceeEEEEeCCCCCeEecCCCCcCCCC-CceEEECCeEEEEEcc------CCcEEEEEeCCCCceeeCcc-ccccc
Q 014222 272 LGSHRQVLSEAYQPETDSWFPVYDGMVAGWR-NPSASLNRHLYALDCK------DGCKIRVYDEVTDSWSKHID-SKMHL 343 (428)
Q Consensus 272 g~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~~~lyv~gG~------~~~~i~~yd~~~~~W~~v~~-~~~~~ 343 (428)
.. ...+.+||+.+++....-........ ...+...+.+|...|. ....+.+||..+.+....-. .....
T Consensus 215 ~~---~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~ 291 (329)
T 3fvz_A 215 RE---NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHF 291 (329)
T ss_dssp TT---TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCC
T ss_pred CC---CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCcc
Confidence 43 23578999987766543211111111 1122233556665542 22479999988776544311 11111
Q ss_pred CCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 344 GNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 344 ~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
..+ ...++..++.|||...... .|.+|+++.
T Consensus 292 ~~p----~~ia~~~dG~lyvad~~~~--~I~~~~~~~ 322 (329)
T 3fvz_A 292 DMP----HDIVASEDGTVYIGDAHTN--TVWKFTLTE 322 (329)
T ss_dssp SSE----EEEEECTTSEEEEEESSSC--CEEEEEEEE
T ss_pred CCe----eEEEECCCCCEEEEECCCC--EEEEEeCCc
Confidence 111 1223344678999865433 466777654
No 100
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.65 E-value=0.13 Score=47.36 Aligned_cols=181 Identities=13% Similarity=0.097 Sum_probs=88.6
Q ss_pred EEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCC
Q 014222 163 AVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPN 241 (428)
Q Consensus 163 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 241 (428)
....++. ++.|+.+ ..+.+||..+++-...-.-.... -.+++. -++.+++.|+.+ ..+.+||..
T Consensus 150 ~~~~~~~-l~s~s~d------~~i~~wd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~sg~~d-------~~v~~wd~~ 214 (340)
T 1got_B 150 RFLDDNQ-IVTSSGD------TTCALWDIETGQQTTTFTGHTGD-VMSLSLAPDTRLFVSGACD-------ASAKLWDVR 214 (340)
T ss_dssp EEEETTE-EEEEETT------SCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEETT-------SCEEEEETT
T ss_pred EECCCCc-EEEEECC------CcEEEEECCCCcEEEEEcCCCCc-eEEEEECCCCCEEEEEeCC-------CcEEEEECC
Confidence 3344434 5555543 25888998877643221111111 111222 256677777764 578899988
Q ss_pred CCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEc
Q 014222 242 KNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDC 317 (428)
Q Consensus 242 t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG 317 (428)
+..-... +.........+.+ ++.+++.|+.+. .+..||..+.+-...-...........+. -++++++.|+
T Consensus 215 ~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d~---~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 289 (340)
T 1got_B 215 EGMCRQT--FTGHESDINAICFFPNGNAFATGSDDA---TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY 289 (340)
T ss_dssp TCSEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCCC---cEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC
Confidence 7643221 1111111122222 566666666432 36788987764322111111111111222 2677777777
Q ss_pred cCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeE
Q 014222 318 KDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSI 370 (428)
Q Consensus 318 ~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~ 370 (428)
.++ .|.+||..+.. .+..+....... .+.....+++.++.|+.++.
T Consensus 290 ~d~-~i~vwd~~~~~--~~~~~~~h~~~v----~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 290 DDF-NCNVWDALKAD--RAGVLAGHDNRV----SCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp TTS-EEEEEETTTCC--EEEEEECCSSCE----EEEEECTTSSCEEEEETTSC
T ss_pred CCC-eEEEEEcccCc--EeeEeecCCCcE----EEEEEcCCCCEEEEEcCCcc
Confidence 664 89999987643 222222111111 12233456777777776653
No 101
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.65 E-value=0.18 Score=45.34 Aligned_cols=226 Identities=7% Similarity=-0.030 Sum_probs=109.0
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeC-CEEEEEeeeCCCCCCCceEEEEECCCCceeeC-CCCCc--CCc
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSG-CHLYLFGGKDPLKGSMRRVIFYSARTNKWHRA-PDMLR--RRH 207 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~-~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~-~~~~~--~r~ 207 (428)
..+.+||+.++++..+...........-.+++...+ +++|+... ...+++||+. ++...+ ..... +..
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-------~~~l~~~d~~-g~~~~~~~~~~~~~~~~ 117 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------RLGLLVVQTD-GTFEEIAKKDSEGRRMQ 117 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-------TTEEEEEETT-SCEEECCSBCTTSCBCB
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-------CCCEEEEeCC-CCEEEEEeccCCCcccc
Confidence 368899998888876532000000011234444433 47888753 1268999998 776655 32211 111
Q ss_pred -ceeeEE-ECCEEEEEccccC--------CCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE-----CC-EEEEEe
Q 014222 208 -FFGSCV-INNCLYVAGGENG--------GVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY-----EG-KWFLKG 271 (428)
Q Consensus 208 -~~~~~~-~~~~iyv~GG~~~--------~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~-----~g-~lyv~G 271 (428)
-..++. -++++|+...... ........+.+||+. .+...+..- .......+.. ++ .+|+..
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE--ESSEEEEEEEECTTSCEEEEEEEE
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC--CCCcceEEEecccCCCCCEEEEEE
Confidence 112232 2578888654320 001122478899987 554433210 0011222333 34 577765
Q ss_pred cCCCCceeEEEEeCC-CCCeEec---CCCCcCCCCCc-eEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccC
Q 014222 272 LGSHRQVLSEAYQPE-TDSWFPV---YDGMVAGWRNP-SAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLG 344 (428)
Q Consensus 272 g~~~~~~~i~~yd~~-~~~W~~~---~~~~~~~~~~~-~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~ 344 (428)
.. ...+.+||+. +++.... ...+......+ .+. -+|.||+....+ ..|.+||+++.+-...-..+. .
T Consensus 195 ~~---~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~-~~i~~~d~~~g~~~~~~~~~~--~ 268 (314)
T 1pjx_A 195 TP---TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS-SHIEVFGPDGGQPKMRIRCPF--E 268 (314)
T ss_dssp TT---TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT-TEEEEECTTCBSCSEEEECSS--S
T ss_pred CC---CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC-CEEEEEcCCCCcEeEEEeCCC--C
Confidence 32 2246788865 3433211 11111100111 222 268898876433 489999998544322111111 1
Q ss_pred CcccccceEEEEeCCe-EEEEeCCCeEEEEEeecCCC
Q 014222 345 NSRALEAAALVPLNGK-LCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 345 ~~~~~~~~~~~~~~~~-lyv~GG~~~~~~v~~yd~~~ 380 (428)
.. ...++..+++ ||+..... ..+..|++.+
T Consensus 269 ~~----~~i~~~~dg~~l~v~~~~~--~~l~~~~~~~ 299 (314)
T 1pjx_A 269 KP----SNLHFKPQTKTIFVTEHEN--NAVWKFEWQR 299 (314)
T ss_dssp CE----EEEEECTTSSEEEEEETTT--TEEEEEECSS
T ss_pred Cc----eeEEECCCCCEEEEEeCCC--CeEEEEeCCC
Confidence 11 1122233455 88876542 2467888876
No 102
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.63 E-value=0.16 Score=47.22 Aligned_cols=185 Identities=10% Similarity=-0.015 Sum_probs=94.5
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcc-eeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCce
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHF-FGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRW 245 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W 245 (428)
.+++.|+.++ .+.+||..+.+....-........ .+++.. ++.+++.|+.+ ..+.+||..+...
T Consensus 87 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 87 TTVAVGSKGG------DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-------GATTLRDFSGSVI 153 (383)
T ss_dssp TEEEEEEBTS------CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-------TEEEEEETTSCEE
T ss_pred CEEEEEcCCC------eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-------CEEEEEECCCCce
Confidence 3666666542 588899887776544332111112 223333 34666766654 5789999998776
Q ss_pred EEcCCCCCCccce-EEE-EECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCe-EEEEEccCC
Q 014222 246 SFISDMSTAMVPF-IGV-VYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRH-LYALDCKDG 320 (428)
Q Consensus 246 ~~~~~~p~~~~~~-~~~-~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~-lyv~gG~~~ 320 (428)
..+.......... .++ .-++.+.+.|+.+ ..+..||.....-..+.... .....+.+ ++. +++.|+.++
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~d~ 227 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGLDGHEIFKEKLHK---AKVTHAEFNPRCDWLMATSSVDA 227 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEETTSCEEEEEECSS---SCEEEEEECSSCTTEEEEEETTS
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEECCCCEEEEeccCC---CcEEEEEECCCCCCEEEEEeCCC
Confidence 6554332211111 222 2256666666543 24778888544333332111 11112222 344 777777664
Q ss_pred cEEEEEeCCCCce--eeCcccccccCCcccccceEEEEe-CCeEEEEeCCCeEEEEEeecCCC
Q 014222 321 CKIRVYDEVTDSW--SKHIDSKMHLGNSRALEAAALVPL-NGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 321 ~~i~~yd~~~~~W--~~v~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.|.+||..+..- ..+..+. ..... ....... ++++++.|+.+. .+.+||..+
T Consensus 228 -~i~iwd~~~~~~~~~~~~~~~-~~~~v----~~~~~s~~~~~~l~~~~~d~--~i~iwd~~~ 282 (383)
T 3ei3_B 228 -TVKLWDLRNIKDKNSYIAEMP-HEKPV----NAAYFNPTDSTKLLTTDQRN--EIRVYSSYD 282 (383)
T ss_dssp -EEEEEEGGGCCSTTCEEEEEE-CSSCE----EEEEECTTTSCEEEEEESSS--EEEEEETTB
T ss_pred -EEEEEeCCCCCcccceEEEec-CCCce----EEEEEcCCCCCEEEEEcCCC--cEEEEECCC
Confidence 899999887321 1111111 11111 1222233 567777776544 466788765
No 103
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.63 E-value=0.37 Score=43.40 Aligned_cols=146 Identities=12% Similarity=0.130 Sum_probs=68.2
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCc-------eeeCCCCCcCCcceeeEEE--C--CEEEEEccccCCCCCCCCeEEE
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNK-------WHRAPDMLRRRHFFGSCVI--N--NCLYVAGGENGGVHRSLRSAEV 237 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~-------W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~v~~ 237 (428)
.+++.|+.++ .+.+||..+.+ |..+..+...........+ + +.+++.|+.+ ..+.+
T Consensus 72 ~~l~s~~~dg------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-------g~v~i 138 (351)
T 3f3f_A 72 RIIASASYDK------TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-------GILRL 138 (351)
T ss_dssp SEEEEEETTS------CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------CEEEE
T ss_pred CEEEEEcCCC------eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC-------CcEEE
Confidence 5777777653 47778876542 3333222221222222222 2 5666666653 57889
Q ss_pred EeCCCCc----eEEc---C--C-CCCCc-cceEEEEE-----CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCC
Q 014222 238 YDPNKNR----WSFI---S--D-MSTAM-VPFIGVVY-----EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGW 301 (428)
Q Consensus 238 yd~~t~~----W~~~---~--~-~p~~~-~~~~~~~~-----~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~ 301 (428)
||..+.+ |... . . .+... ........ ++.+++.|+... .+..++........+........
T Consensus 139 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~h~~ 215 (351)
T 3f3f_A 139 YDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ---AIIYQRGKDGKLHVAAKLPGHKS 215 (351)
T ss_dssp EECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE---EEEEEECTTSCEEEEEECCCCCS
T ss_pred ecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCC---cEEEEccCCCceeeeeecCCCCc
Confidence 9987653 2210 0 0 01111 11112222 255666655322 23455566666544332111111
Q ss_pred CCceEEE--CC----eEEEEEccCCcEEEEEeCCCC
Q 014222 302 RNPSASL--NR----HLYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 302 ~~~~~~~--~~----~lyv~gG~~~~~i~~yd~~~~ 331 (428)
....+.+ ++ .+++.|+.++ .|.+||..+.
T Consensus 216 ~i~~~~~~p~~~~~~~~l~s~~~dg-~i~iwd~~~~ 250 (351)
T 3f3f_A 216 LIRSISWAPSIGRWYQLIATGCKDG-RIRIFKITEK 250 (351)
T ss_dssp CEEEEEECCCSSCSSEEEEEEETTS-CEEEEEEEEC
T ss_pred ceeEEEECCCCCCcceEEEEEcCCC-eEEEEeCCCC
Confidence 1112222 33 6777777664 6888887653
No 104
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.61 E-value=0.17 Score=48.07 Aligned_cols=212 Identities=10% Similarity=0.018 Sum_probs=101.7
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++.... +... ...-.+++...++.+++.|+.++ .+.+||..+.+-.. .+.........+
T Consensus 131 ~i~vwd~~~~~~~~~--l~~h--~~~V~~v~~~~~~~~l~sgs~D~------~i~iwd~~~~~~~~--~~~~h~~~V~~v 198 (410)
T 1vyh_C 131 TIKVWDYETGDFERT--LKGH--TDSVQDISFDHSGKLLASCSADM------TIKLWDFQGFECIR--TMHGHDHNVSSV 198 (410)
T ss_dssp CEEEEETTTCCCCEE--ECCC--SSCEEEEEECTTSSEEEEEETTS------CCCEEETTSSCEEE--CCCCCSSCEEEE
T ss_pred eEEEEECCCCcEEEE--Eecc--CCcEEEEEEcCCCCEEEEEeCCC------eEEEEeCCCCceeE--EEcCCCCCEEEE
Confidence 677888877653221 1111 01123344433336777777653 46678876654322 121111111222
Q ss_pred EE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEE-cCCCCCCccceEEEE--ECCEEEEEecCCCCceeEEEEeCCC
Q 014222 213 VI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF-ISDMSTAMVPFIGVV--YEGKWFLKGLGSHRQVLSEAYQPET 287 (428)
Q Consensus 213 ~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~~~~~~~~~--~~g~lyv~Gg~~~~~~~i~~yd~~~ 287 (428)
.+ ++..++.|+.+ ..+.+||..+..-.. +.. .......+. -++.+++.|+.+. .+..||..+
T Consensus 199 ~~~p~~~~l~s~s~D-------~~i~~wd~~~~~~~~~~~~---h~~~v~~~~~~~~g~~l~s~s~D~---~v~vwd~~~ 265 (410)
T 1vyh_C 199 SIMPNGDHIVSASRD-------KTIKMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQ---TVRVWVVAT 265 (410)
T ss_dssp EECSSSSEEEEEETT-------SEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSSEEEEEETTS---CEEEEETTT
T ss_pred EEeCCCCEEEEEeCC-------CeEEEEECCCCcEEEEEeC---CCccEEEEEECCCCCEEEEEcCCC---eEEEEECCC
Confidence 22 45666667754 578999998775322 111 111111222 2566666665432 356788776
Q ss_pred CCeEecCCCCcCCCCCceE----------------------EECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCC
Q 014222 288 DSWFPVYDGMVAGWRNPSA----------------------SLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGN 345 (428)
Q Consensus 288 ~~W~~~~~~~~~~~~~~~~----------------------~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~ 345 (428)
..-...-..... ...++ ...+.+++.|+.++ .|.+||..+..= +..+......
T Consensus 266 ~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~-~i~iwd~~~~~~--~~~~~~h~~~ 340 (410)
T 1vyh_C 266 KECKAELREHRH--VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK-TIKMWDVSTGMC--LMTLVGHDNW 340 (410)
T ss_dssp CCEEEEECCCSS--CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS-EEEEEETTTTEE--EEEEECCSSC
T ss_pred CceeeEecCCCc--eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC-eEEEEECCCCce--EEEEECCCCc
Confidence 654321100000 00011 11256667776654 899999887642 2111111111
Q ss_pred cccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 346 SRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 346 ~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
. .......+++.++.|+.++ .+.+||..+
T Consensus 341 v----~~v~~~~~g~~l~s~s~D~--~i~vwd~~~ 369 (410)
T 1vyh_C 341 V----RGVLFHSGGKFILSCADDK--TLRVWDYKN 369 (410)
T ss_dssp E----EEEEECSSSSCEEEEETTT--EEEEECCTT
T ss_pred E----EEEEEcCCCCEEEEEeCCC--eEEEEECCC
Confidence 1 1233344667777777655 356777755
No 105
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.58 E-value=0.14 Score=46.60 Aligned_cols=194 Identities=9% Similarity=0.023 Sum_probs=87.6
Q ss_pred cceEEEEeeCCCCceeEEEEeCC-CCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECC--C
Q 014222 118 EEWIYVIKRDREGKISWHAFDPI-YQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSAR--T 193 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~-~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~--t 193 (428)
+..+|+.++. ...+.+||.. +++...+...+.. ..-..++.. ++..+|+.+. . ...+.+|+.. +
T Consensus 4 ~~~l~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~~~~~-~-----~~~v~~~~~~~~~ 71 (343)
T 1ri6_A 4 KQTVYIASPE---SQQIHVWNLNHEGALTLTQVVDVP---GQVQPMVVSPDKRYLYVGVR-P-----EFRVLAYRIAPDD 71 (343)
T ss_dssp EEEEEEEEGG---GTEEEEEEECTTSCEEEEEEEECS---SCCCCEEECTTSSEEEEEET-T-----TTEEEEEEECTTT
T ss_pred eEEEEEeCCC---CCeEEEEEECCCCcEEEeeeEecC---CCCceEEECCCCCEEEEeec-C-----CCeEEEEEecCCC
Confidence 3556666431 2356667663 4444433222211 112233333 3434665533 2 1367777765 7
Q ss_pred CceeeCCCCCcCCcceeeEEE-CC-EEEEEccccCCCCCCCCeEEEEeCCCC-ceEEcCCCCCCccceEEEE-ECC-EEE
Q 014222 194 NKWHRAPDMLRRRHFFGSCVI-NN-CLYVAGGENGGVHRSLRSAEVYDPNKN-RWSFISDMSTAMVPFIGVV-YEG-KWF 268 (428)
Q Consensus 194 ~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~v~~yd~~t~-~W~~~~~~p~~~~~~~~~~-~~g-~ly 268 (428)
++++.+..++....-..++.- ++ .+|+.+..+ ..+.+||.... ....+...+.......++. -++ .+|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 144 (343)
T 1ri6_A 72 GALTFAAESALPGSLTHISTDHQGQFVFVGSYNA-------GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLW 144 (343)
T ss_dssp CCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT-------TEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEE
T ss_pred CceeeccccccCCCCcEEEEcCCCCEEEEEecCC-------CeEEEEECCCCccccccccccCCCCceEEEECCCCCEEE
Confidence 777765444322211222222 34 466654321 46888887422 1222221111111122222 244 577
Q ss_pred EEecCCCCceeEEEEeCCC-CCeEecC--CC-CcCCCCCceEEE--CCe-EEEEEccCCcEEEEEeCC--CCcee
Q 014222 269 LKGLGSHRQVLSEAYQPET-DSWFPVY--DG-MVAGWRNPSASL--NRH-LYALDCKDGCKIRVYDEV--TDSWS 334 (428)
Q Consensus 269 v~Gg~~~~~~~i~~yd~~~-~~W~~~~--~~-~~~~~~~~~~~~--~~~-lyv~gG~~~~~i~~yd~~--~~~W~ 334 (428)
+.+.. ...+..||..+ .+...+. .. .........+.+ +++ ||+.+..+ ..+.+||.. +.++.
T Consensus 145 ~~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~-~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 145 VPALK---QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN-SSVDVWELKDPHGNIE 215 (343)
T ss_dssp EEEGG---GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT-TEEEEEESSCTTSCCE
T ss_pred EecCC---CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC-CEEEEEEecCCCCcEE
Confidence 66522 12477888877 6665332 10 111111112222 444 66666443 588999884 34444
No 106
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.58 E-value=0.053 Score=50.99 Aligned_cols=149 Identities=9% Similarity=0.032 Sum_probs=73.0
Q ss_pred EEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEEEe
Q 014222 161 GCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVYD 239 (428)
Q Consensus 161 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd 239 (428)
+++...++ .+++|+.+ ..+.+||..+.+-...-...... -..++.. +++.++.|+.+ ..+.+||
T Consensus 211 ~~~~~~~~-~~~~~~~~------g~i~~~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~d-------~~i~i~d 275 (425)
T 1r5m_A 211 DVEWVDDD-KFVIPGPK------GAIFVYQITEKTPTGKLIGHHGP-ISVLEFNDTNKLLLSASDD-------GTLRIWH 275 (425)
T ss_dssp CCEEEETT-EEEEECGG------GCEEEEETTCSSCSEEECCCSSC-EEEEEEETTTTEEEEEETT-------SCEEEEC
T ss_pred EEEEcCCC-EEEEEcCC------CeEEEEEcCCCceeeeeccCCCc-eEEEEECCCCCEEEEEcCC-------CEEEEEE
Confidence 34444553 56666654 36889998876422111111111 1122222 55666666653 4688899
Q ss_pred CCCCceEEcCCCCCCccceEEEEE-CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEEE
Q 014222 240 PNKNRWSFISDMSTAMVPFIGVVY-EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRHLYALD 316 (428)
Q Consensus 240 ~~t~~W~~~~~~p~~~~~~~~~~~-~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~g 316 (428)
..+.+-...-..... .-..+... ++ +++.++.. ..+..||..+.+-...-. ........+.+ ++.++++|
T Consensus 276 ~~~~~~~~~~~~~~~-~i~~~~~~~~~-~l~~~~~d---~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~ 348 (425)
T 1r5m_A 276 GGNGNSQNCFYGHSQ-SIVSASWVGDD-KVISCSMD---GSVRLWSLKQNTLLALSI--VDGVPIFAGRISQDGQKYAVA 348 (425)
T ss_dssp SSSBSCSEEECCCSS-CEEEEEEETTT-EEEEEETT---SEEEEEETTTTEEEEEEE--CTTCCEEEEEECTTSSEEEEE
T ss_pred CCCCccceEecCCCc-cEEEEEECCCC-EEEEEeCC---CcEEEEECCCCcEeEecc--cCCccEEEEEEcCCCCEEEEE
Confidence 876543221111111 11223333 55 44445432 246789987765332211 10111112222 57777777
Q ss_pred ccCCcEEEEEeCCCCc
Q 014222 317 CKDGCKIRVYDEVTDS 332 (428)
Q Consensus 317 G~~~~~i~~yd~~~~~ 332 (428)
+.++ .|.+||..+..
T Consensus 349 ~~dg-~i~i~~~~~~~ 363 (425)
T 1r5m_A 349 FMDG-QVNVYDLKKLN 363 (425)
T ss_dssp ETTS-CEEEEECHHHH
T ss_pred ECCC-eEEEEECCCCc
Confidence 6654 78999987654
No 107
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.52 E-value=0.064 Score=48.21 Aligned_cols=191 Identities=13% Similarity=0.136 Sum_probs=100.2
Q ss_pred EEEEEe-CCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEE
Q 014222 161 GCAVLS-GCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVY 238 (428)
Q Consensus 161 ~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~y 238 (428)
+.+... +..+|+++..+ ..+++||+.++ .+.... +.. .-.+++. -++++|+.... ...+.+|
T Consensus 32 g~~~d~~g~~l~~~~~~~------~~i~~~~~~~~-~~~~~~-~~~-~~~~l~~~~dg~l~v~~~~-------~~~i~~~ 95 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVRQ------NRTWAWSDDGQ-LSPEMH-PSH-HQNGHCLNKQGHLIACSHG-------LRRLERQ 95 (296)
T ss_dssp EEEEEGGGTEEEEEEGGG------TEEEEEETTSC-EEEEES-SCS-SEEEEEECTTCCEEEEETT-------TTEEEEE
T ss_pred CCeEeCCCCEEEEEeCCC------CEEEEEECCCC-eEEEEC-CCC-CcceeeECCCCcEEEEecC-------CCeEEEE
Confidence 344432 32488876533 37899999987 554422 111 1122333 26788876432 1579999
Q ss_pred eCCCCceEEcCCCCC----CccceEEEEECCEEEEE----ecC----------CCCceeEEEEeCCCCCeEecCCCCcCC
Q 014222 239 DPNKNRWSFISDMST----AMVPFIGVVYEGKWFLK----GLG----------SHRQVLSEAYQPETDSWFPVYDGMVAG 300 (428)
Q Consensus 239 d~~t~~W~~~~~~p~----~~~~~~~~~~~g~lyv~----Gg~----------~~~~~~i~~yd~~~~~W~~~~~~~~~~ 300 (428)
|+.+.+.+.+..... ......++.-+|++|+. |.. ......++.||+. ++...+.....
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~-- 172 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV-- 172 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS--
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC--
Confidence 998888766532211 11122233347889986 320 1112358899987 55554432111
Q ss_pred CCCceEEE--CCeEEEEEccCCcEEEEEeCC-CCce-eeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEee
Q 014222 301 WRNPSASL--NRHLYALDCKDGCKIRVYDEV-TDSW-SKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVS 376 (428)
Q Consensus 301 ~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~-~~~W-~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~y 376 (428)
....+.+ +++++ +.......|++||.. +.+. .....+......+ ...++..+|+||+.. . ..+.+|
T Consensus 173 -~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p----~~i~~d~~G~l~v~~-~---~~v~~~ 242 (296)
T 3e5z_A 173 -KPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKT----DGLRVDAGGLIWASA-G---DGVHVL 242 (296)
T ss_dssp -SEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCC----CSEEEBTTSCEEEEE-T---TEEEEE
T ss_pred -CCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCC----CeEEECCCCCEEEEc-C---CeEEEE
Confidence 1112232 57776 444444689999986 4444 2111110111111 123444578899877 2 247789
Q ss_pred cCCC
Q 014222 377 KSNG 380 (428)
Q Consensus 377 d~~~ 380 (428)
|++.
T Consensus 243 ~~~g 246 (296)
T 3e5z_A 243 TPDG 246 (296)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 9877
No 108
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.51 E-value=0.14 Score=47.13 Aligned_cols=178 Identities=10% Similarity=0.086 Sum_probs=86.6
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++|.....+.... ...-.+++...++..++.|+.++ .+.+||..++.+..+..+.........+
T Consensus 39 ~i~iw~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~g~~l~s~s~D~------~v~iw~~~~~~~~~~~~~~~h~~~v~~v 111 (345)
T 3fm0_A 39 RIRIWGTEGDSWICKSVLSEGH-QRTVRKVAWSPCGNYLASASFDA------TTCIWKKNQDDFECVTTLEGHENEVKSV 111 (345)
T ss_dssp CEEEEEEETTEEEEEEEECSSC-SSCEEEEEECTTSSEEEEEETTS------CEEEEEECCC-EEEEEEECCCSSCEEEE
T ss_pred eEEEEEcCCCcceeeeeecccc-CCcEEEEEECCCCCEEEEEECCC------cEEEEEccCCCeEEEEEccCCCCCceEE
Confidence 5677888777764322111110 11122333333335777777553 4667777776654433332211111222
Q ss_pred EE--CCEEEEEccccCCCCCCCCeEEEEeCCCCc-eEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCC
Q 014222 213 VI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNR-WSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPET 287 (428)
Q Consensus 213 ~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~ 287 (428)
.+ ++++++.|+.+ ..+.+||..+.. +..+..+.........+.. ++.+.+.|+.+. .+..||..+
T Consensus 112 ~~sp~~~~l~s~s~D-------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~---~i~~w~~~~ 181 (345)
T 3fm0_A 112 AWAPSGNLLATCSRD-------KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD---TVKLYREEE 181 (345)
T ss_dssp EECTTSSEEEEEETT-------SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS---CEEEEEEET
T ss_pred EEeCCCCEEEEEECC-------CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC---cEEEEEecC
Confidence 22 56777777764 468888886642 3222211111111122222 556666665432 366888888
Q ss_pred CCeEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeC
Q 014222 288 DSWFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDE 328 (428)
Q Consensus 288 ~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~ 328 (428)
+.|..+............+.+ +++.++.|+.++ .|.+||.
T Consensus 182 ~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~-~v~iW~~ 223 (345)
T 3fm0_A 182 DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR-TVRIWRQ 223 (345)
T ss_dssp TEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-CEEEEEE
T ss_pred CCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC-eEEEecc
Confidence 877654321111111112222 577777777664 6777764
No 109
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.50 E-value=0.14 Score=47.54 Aligned_cols=193 Identities=11% Similarity=0.025 Sum_probs=86.5
Q ss_pred EEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCc-CCc-c-eeeEE-ECCEEEEEccccCCCCCCCCeEE
Q 014222 161 GCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLR-RRH-F-FGSCV-INNCLYVAGGENGGVHRSLRSAE 236 (428)
Q Consensus 161 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~-~r~-~-~~~~~-~~~~iyv~GG~~~~~~~~~~~v~ 236 (428)
+++...++.++ .++.+ ..+.+||..+++-........ ... . .+++. -+++.++.|+.+ ..+.
T Consensus 99 ~~~~s~d~~~l-~~s~d------g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-------g~v~ 164 (357)
T 4g56_B 99 DVAWVSEKGIL-VASDS------GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-------FSVK 164 (357)
T ss_dssp EEEEETTTEEE-EEETT------SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-------SCEE
T ss_pred EEEEcCCCCEE-EEECC------CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-------CeEE
Confidence 34444443444 45543 257888887765333222111 111 1 11222 256777777764 4788
Q ss_pred EEeCCCCceEEcCCCCCCccceEEEE-ECC-EEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE---CCe
Q 014222 237 VYDPNKNRWSFISDMSTAMVPFIGVV-YEG-KWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL---NRH 311 (428)
Q Consensus 237 ~yd~~t~~W~~~~~~p~~~~~~~~~~-~~g-~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~ 311 (428)
+||..+.+-...-....... ..++. .++ .+++.++.+. .+..||..+.+-..............++.+ ++.
T Consensus 165 iwd~~~~~~~~~~~~h~~~v-~~v~~s~~~~~~~~s~~~dg---~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 240 (357)
T 4g56_B 165 VWDLSQKAVLKSYNAHSSEV-NCVAACPGKDTIFLSCGEDG---RILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD 240 (357)
T ss_dssp EEETTTTEEEEEECCCSSCE-EEEEECTTCSSCEEEEETTS---CEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT
T ss_pred EEECCCCcEEEEEcCCCCCE-EEEEEccCCCceeeeeccCC---ceEEEECCCCceeeeeeeccccccccchhhhhcccc
Confidence 99998875432211111111 11222 233 3555555432 367888877653322111111111112333 466
Q ss_pred EEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeC-CeEEEEeCCCeEEEEEeecCCC
Q 014222 312 LYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLN-GKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 312 lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~-~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+++.|+.++ .|.+||..+.+ .+..+....... .......+ +++++.|+.+. .+.+||..+
T Consensus 241 ~la~g~~d~-~i~~wd~~~~~--~~~~~~~~~~~v----~~l~~sp~~~~~lasgs~D~--~i~iwd~~~ 301 (357)
T 4g56_B 241 TFACGDETG-NVSLVNIKNPD--SAQTSAVHSQNI----TGLAYSYHSSPFLASISEDC--TVAVLDADF 301 (357)
T ss_dssp EEEEEESSS-CEEEEESSCGG--GCEEECCCSSCE----EEEEECSSSSCCEEEEETTS--CEEEECTTS
T ss_pred eEEEeeccc-ceeEEECCCCc--EeEEEeccceeE----EEEEEcCCCCCEEEEEeCCC--EEEEEECCC
Confidence 777777654 79999987653 222211111111 11222233 46666776554 356788777
No 110
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.50 E-value=0.26 Score=44.23 Aligned_cols=187 Identities=9% Similarity=0.052 Sum_probs=88.8
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE----CCEEEEEccccCCCCCCCCeEEEEeCCCCc
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI----NNCLYVAGGENGGVHRSLRSAEVYDPNKNR 244 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~ 244 (428)
+.++.|+.++ .+.+||..++..+.+..+.........+.+ ++.+++.|+.+ ..+.+||..+.+
T Consensus 22 ~~las~s~D~------~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-------~~v~iWd~~~~~ 88 (297)
T 2pm7_B 22 KRMATCSSDK------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------GKVMIWKEENGR 88 (297)
T ss_dssp SEEEEEETTS------CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-------TEEEEEEBSSSC
T ss_pred CEEEEEeCCC------EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-------CEEEEEEcCCCc
Confidence 5777777553 577888765543333222211111112222 25677777764 588999998887
Q ss_pred eEEcCCCCCCccceEEEEE--C--CEEEEEecCCCCceeEEEEeCCCCC-eEecCCCCcCCC-CCceEEE----------
Q 014222 245 WSFISDMSTAMVPFIGVVY--E--GKWFLKGLGSHRQVLSEAYQPETDS-WFPVYDGMVAGW-RNPSASL---------- 308 (428)
Q Consensus 245 W~~~~~~p~~~~~~~~~~~--~--g~lyv~Gg~~~~~~~i~~yd~~~~~-W~~~~~~~~~~~-~~~~~~~---------- 308 (428)
|..+..+.........+.. + +.+.+.|+.+ ..+..||..+.. +.... ..... ....+.+
T Consensus 89 ~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d---~~v~~wd~~~~~~~~~~~--~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 89 WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD---GKVSVVEFKENGTTSPII--IDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT---SEEEEEEBCSSSCBCCEE--EECCSSCEEEEEECCCC------
T ss_pred eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC---CcEEEEEecCCCceeeee--eecccCccceEeecCCccccccc
Confidence 7554322211112222333 2 4555555532 235677776542 21110 00000 0001111
Q ss_pred -----CCeEEEEEccCCcEEEEEeCCCC--ceeeCcccccccCCcccccceEEEEeC---CeEEEEeCCCeEEEEEeecC
Q 014222 309 -----NRHLYALDCKDGCKIRVYDEVTD--SWSKHIDSKMHLGNSRALEAAALVPLN---GKLCIIRNNMSISLVDVSKS 378 (428)
Q Consensus 309 -----~~~lyv~gG~~~~~i~~yd~~~~--~W~~v~~~~~~~~~~~~~~~~~~~~~~---~~lyv~GG~~~~~~v~~yd~ 378 (428)
++++++.|+.++ .|.+||..+. .|..+..+....... .......+ +.+++.|+.+..-. +||.
T Consensus 164 ~~~~~~~~~l~sgs~D~-~v~lwd~~~~~~~~~~~~~l~~H~~~V----~~v~~sp~~~~~~~las~s~D~~v~--iWd~ 236 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWV----RDVAWSPTVLLRSYMASVSQDRTCI--IWTQ 236 (297)
T ss_dssp ------CCEEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCE----EEEEECCCCSSSEEEEEEETTSCEE--EEEE
T ss_pred CCCCCCcceEEEEcCCC-cEEEEEEcCCCceEEEEEEecCCCCce----EEEEECCCCCCceEEEEEECCCcEE--EEEe
Confidence 245777777664 6777776553 355444332221111 11122222 47777787766444 4554
Q ss_pred CC
Q 014222 379 NG 380 (428)
Q Consensus 379 ~~ 380 (428)
.+
T Consensus 237 ~~ 238 (297)
T 2pm7_B 237 DN 238 (297)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 111
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.47 E-value=0.24 Score=46.11 Aligned_cols=218 Identities=10% Similarity=0.001 Sum_probs=103.9
Q ss_pred eEEEEeCCCCc-------eEeCCCCCCCCccccccEEEEEeC----C---EEEEEeeeCCCCCCCceEEEEECCCCc---
Q 014222 133 SWHAFDPIYQL-------WQPLPPIPKEYSEALGFGCAVLSG----C---HLYLFGGKDPLKGSMRRVIFYSARTNK--- 195 (428)
Q Consensus 133 ~~~~yd~~~~~-------W~~l~~~~~~~~~r~~~~~~~~~~----~---~lyv~GG~~~~~~~~~~v~~yd~~t~~--- 195 (428)
.+.+||..+++ -..+.... ..-.+++...+ + ..++.|+.++ .+.+||..++.
T Consensus 37 ~i~iw~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~g~~~~~l~s~~~dg------~i~iw~~~~~~~~~ 105 (397)
T 1sq9_A 37 YLKVWDNKLLDNENPKDKSYSHFVHK-----SGLHHVDVLQAIERDAFELCLVATTSFSG------DLLFYRITREDETK 105 (397)
T ss_dssp EEEEEESBCCTTCCGGGGEEEEECCT-----TCEEEEEEEEEEETTTEEEEEEEEEETTS------CEEEEEEEECTTTC
T ss_pred EEEEEECCCcccccCCCcceEEecCC-----CcEEEEEEecccccCCccccEEEEEcCCC------CEEEEEccCCcccc
Confidence 67788887765 22222111 11233444433 4 5667776542 57788877666
Q ss_pred ---eeeCCCCCcC---CcceeeEEE-----CCEE-EEEccccCCCCCCCCeEEEEeCCC------Cc---eE---EcCC-
Q 014222 196 ---WHRAPDMLRR---RHFFGSCVI-----NNCL-YVAGGENGGVHRSLRSAEVYDPNK------NR---WS---FISD- 250 (428)
Q Consensus 196 ---W~~~~~~~~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~~~v~~yd~~t------~~---W~---~~~~- 250 (428)
+..+...... ..-..++.. ++.. ++.|+.+ ..+.+||..+ .+ |. .+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 178 (397)
T 1sq9_A 106 KVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------GTTYIWKFHPFADESNSLTLNWSPTLELQGT 178 (397)
T ss_dssp CEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEE
T ss_pred cccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------CcEEEEeCCccccccccceeeccCcceeeee
Confidence 5555443211 111223333 4555 6666653 4678888766 21 11 1100
Q ss_pred ----CCCCccceEEEEE-CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCc-C---CCCCceEEE--CCeEEEEEccC
Q 014222 251 ----MSTAMVPFIGVVY-EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMV-A---GWRNPSASL--NRHLYALDCKD 319 (428)
Q Consensus 251 ----~p~~~~~~~~~~~-~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~-~---~~~~~~~~~--~~~lyv~gG~~ 319 (428)
......-..++.. ++ +++.|+.+ ..+..||..+.+-...-.... . ......+.+ ++.++++++.+
T Consensus 179 ~~~~~~~~~~i~~~~~~~~~-~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 179 VESPMTPSQFATSVDISERG-LIATGFNN---GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp ECCSSSSCCCCCEEEECTTS-EEEEECTT---SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEE
T ss_pred eccccCCCCCceEEEECCCc-eEEEEeCC---CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecC
Confidence 0011111222222 56 55555432 246789988765332211100 0 111112232 57777777655
Q ss_pred C--cEEEEEeCCCCceeeCccccc-------------ccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 320 G--CKIRVYDEVTDSWSKHIDSKM-------------HLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 320 ~--~~i~~yd~~~~~W~~v~~~~~-------------~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+ ..|.+||..+.+-.. .+.. .... ........++++++.|+.++ .+.+||..+
T Consensus 255 ~~~g~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~ 322 (397)
T 1sq9_A 255 NSFGCITLYETEFGERIG--SLSVPTHSSQASLGEFAHSSW----VMSLSFNDSGETLCSAGWDG--KLRFWDVKT 322 (397)
T ss_dssp TTEEEEEEEETTTCCEEE--EECBC--------CCBSBSSC----EEEEEECSSSSEEEEEETTS--EEEEEETTT
T ss_pred CCCceEEEEECCCCcccc--eeccCcccccccccccccCCc----EEEEEECCCCCEEEEEeCCC--eEEEEEcCC
Confidence 1 379999987654221 1111 1111 11223334577777777554 466788766
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.44 E-value=0.47 Score=42.40 Aligned_cols=229 Identities=11% Similarity=0.031 Sum_probs=106.5
Q ss_pred EEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCC
Q 014222 121 IYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAP 200 (428)
Q Consensus 121 l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 200 (428)
++..|.+ ..+.++|..+++...+-..... ...-.+++...+++.++.|+.++ .+.++|..+++-....
T Consensus 38 ~lAvg~D----~tV~iWd~~tg~~~~~~~~~~~--~~~V~~v~~~~~~~~l~sgs~Dg------~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 38 VLAVALD----NSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRLRNM 105 (318)
T ss_dssp EEEEEET----TEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEEEEEE
T ss_pred EEEEEeC----CEEEEEECCCCCEEEEEEecCC--CCeEEEEEECCCCCEEEEEECCC------cEEEeecCCceeEEEe
Confidence 4555543 2688999999876544322221 11223444444446777777543 6888998887643321
Q ss_pred CCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCC-CCCccceEEEEECCEEEEEecCCCCcee
Q 014222 201 DMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDM-STAMVPFIGVVYEGKWFLKGLGSHRQVL 279 (428)
Q Consensus 201 ~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~-p~~~~~~~~~~~~g~lyv~Gg~~~~~~~ 279 (428)
.... ........++.+.+.|+.+ ..+..++..+......... ............++++.+.|+.+. .
T Consensus 106 ~~h~--~~~~~~~~~~~~l~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~---~ 173 (318)
T 4ggc_A 106 TSHS--ARVGSLSWNSYILSSGSRS-------GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN---L 173 (318)
T ss_dssp ECCS--SCEEEEEEETTEEEEEETT-------SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS---C
T ss_pred cCcc--ceEEEeecCCCEEEEEecC-------CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc---c
Confidence 1111 1222333445555656543 3555666555433221110 111111122223555555554322 3
Q ss_pred EEEEeCCCCCeEecCCCCcCCCCCc--eEE---ECCe-EEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceE
Q 014222 280 SEAYQPETDSWFPVYDGMVAGWRNP--SAS---LNRH-LYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAA 353 (428)
Q Consensus 280 i~~yd~~~~~W~~~~~~~~~~~~~~--~~~---~~~~-lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~ 353 (428)
+..||..+.+-.............. ... .++. +++..|.....|.++|.....-......... . ....
T Consensus 174 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~---v---~~~~ 247 (318)
T 4ggc_A 174 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ---V---CSIL 247 (318)
T ss_dssp EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSC---E---EEEE
T ss_pred eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceee---e---eeee
Confidence 5688887654211110001111111 111 1333 4445555556789999887654443221111 1 1122
Q ss_pred EEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 354 LVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 354 ~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
....++.+++.+|.. ...+.+||..+
T Consensus 248 ~~~~~~~~~~~sg~~-d~~i~iwd~~~ 273 (318)
T 4ggc_A 248 WSPHYKELISGHGFA-QNQLVIWKYPT 273 (318)
T ss_dssp EETTTTEEEEEECTT-TCCEEEEETTT
T ss_pred ecccccceEEEEEcC-CCEEEEEECCC
Confidence 333344555554432 23467888766
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.44 E-value=0.048 Score=56.54 Aligned_cols=189 Identities=7% Similarity=0.010 Sum_probs=99.3
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE--C--CEEEEEccccCCCCCCCCeEEEEeCCCCc
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--N--NCLYVAGGENGGVHRSLRSAEVYDPNKNR 244 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~v~~yd~~t~~ 244 (428)
..++.||.+ ..+.+||..++++..+..+...........+ + +..++.|+.+ ..+.+||..+++
T Consensus 22 ~~latg~~d------g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-------g~I~vwd~~~~~ 88 (753)
T 3jro_A 22 KRLATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------GKVLIWKEENGR 88 (753)
T ss_dssp CCEEEEETT------TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-------SCEEEEEEETTE
T ss_pred CeEEEEECC------CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-------CeEEEEECCCCc
Confidence 566666654 2678888877777665444332222222333 2 6677777764 578999999988
Q ss_pred eEEcCCCCCCccceEEEEE--C--CEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE------------
Q 014222 245 WSFISDMSTAMVPFIGVVY--E--GKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL------------ 308 (428)
Q Consensus 245 W~~~~~~p~~~~~~~~~~~--~--g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~------------ 308 (428)
|..+..+.........+.. + +.+++.|+.+ ..+..||..+..-..............++..
T Consensus 89 ~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d---g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 89 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD---GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--------
T ss_pred ccccccccCCCCCeEEEEECCCCCCCEEEEEeCC---CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccc
Confidence 7666544322222233333 3 6666666543 2467888876632111100000000111221
Q ss_pred ---CCeEEEEEccCCcEEEEEeCCCC--ceeeCcccccccCCcccccceEEEEeC---CeEEEEeCCCeEEEEEeecCCC
Q 014222 309 ---NRHLYALDCKDGCKIRVYDEVTD--SWSKHIDSKMHLGNSRALEAAALVPLN---GKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 309 ---~~~lyv~gG~~~~~i~~yd~~~~--~W~~v~~~~~~~~~~~~~~~~~~~~~~---~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
++.+++.|+.++ .|.+||..+. .+..+..+....... .......+ +++++.||.++. +.+||..+
T Consensus 166 ~~~d~~~l~sgs~dg-~I~iwd~~~~~~~~~~~~~~~~h~~~V----~~l~~sp~~~~~~~l~s~s~Dg~--I~iwd~~~ 238 (753)
T 3jro_A 166 GTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWV----RDVAWSPTVLLRSYLASVSQDRT--CIIWTQDN 238 (753)
T ss_dssp -CGGGCCEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCE----EEEEECCCCSSSEEEEEEESSSC--EEEEEESS
T ss_pred cCCCCCEEEEEECCC-eEEEEeccCCcccceeeeeecCCCCcE----EEEEeccCCCCCCEEEEEecCCE--EEEecCCC
Confidence 366777777664 6888887654 344443332221111 12223334 678888876653 45666655
No 114
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.44 E-value=0.34 Score=45.31 Aligned_cols=219 Identities=7% Similarity=0.030 Sum_probs=106.7
Q ss_pred eEEEEeCCC----C-ceEeCCCCCCCCccccccEEEEEeC-CEEEEEeeeCCCCCCCceEEEEECCCCc------ee-eC
Q 014222 133 SWHAFDPIY----Q-LWQPLPPIPKEYSEALGFGCAVLSG-CHLYLFGGKDPLKGSMRRVIFYSARTNK------WH-RA 199 (428)
Q Consensus 133 ~~~~yd~~~----~-~W~~l~~~~~~~~~r~~~~~~~~~~-~~lyv~GG~~~~~~~~~~v~~yd~~t~~------W~-~~ 199 (428)
.+.+||..+ . .-..+.... ..-.+++...+ ..+++.|+.++ .+.+||..+.+ -. .+
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~ 158 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHS-----SSVKTVKFNAKQDNVLASGGNNG------EIFIWDMNKCTESPSNYTPLTP 158 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSS-----SCCCEEEECSSSTTBEEEECSSS------CEEBCBTTTTSSCTTTCCCBCC
T ss_pred eEEEeecccccccccchhhccCCc-----cceEEEEEcCCCCCEEEEEcCCC------eEEEEECCCCcccccccccccc
Confidence 577788776 1 222332211 11233444321 25777776542 58888987765 11 11
Q ss_pred CCCCcCCcc-eeeEEE-C-CEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCC----ccceEEEEE--CC-EEEE
Q 014222 200 PDMLRRRHF-FGSCVI-N-NCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTA----MVPFIGVVY--EG-KWFL 269 (428)
Q Consensus 200 ~~~~~~r~~-~~~~~~-~-~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~----~~~~~~~~~--~g-~lyv 269 (428)
......... .+++.. + +.+++.|+.+ ..+.+||..+.+-...-..+.. ......+.+ ++ .+++
T Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 159 GQSMSSVDEVISLAWNQSLAHVFASAGSS-------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp CCSCCSSCCCCEEEECSSCTTEEEEESSS-------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred ccccCCCCCeeEEEeCCCCCcEEEEEcCC-------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 111111111 122222 2 5677777654 4789999988765433222211 112222222 33 4666
Q ss_pred EecCCCCceeEEEEeCCCCCeEecCCCCc-CCCC-CceEEE---CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccC
Q 014222 270 KGLGSHRQVLSEAYQPETDSWFPVYDGMV-AGWR-NPSASL---NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLG 344 (428)
Q Consensus 270 ~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~-~~~~-~~~~~~---~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~ 344 (428)
.|+.......+..||..+..- .+.. .. .... ...+.+ ++.+++.|+.++ .|.+||..+.+- +..+.....
T Consensus 232 ~~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~~v~~~~~s~~~~~~l~s~~~dg-~v~~wd~~~~~~--~~~~~~~~~ 306 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNANT-PLQT-LNQGHQKGILSLDWCHQDEHLLLSSGRDN-TVLLWNPESAEQ--LSQFPARGN 306 (416)
T ss_dssp EEECCSSSCCCCEEETTSTTS-CSBC-CCSCCSSCEEEEEECSSCSSCEEEEESSS-EEEEECSSSCCE--EEEEECSSS
T ss_pred EEECCCCCceEEEEeCCCCCC-CcEE-eecCccCceeEEEeCCCCCCeEEEEeCCC-CEEEeeCCCCcc--ceeecCCCC
Confidence 665443222467899877531 1111 11 1111 112333 677788887664 799999887642 222221111
Q ss_pred CcccccceEEEEeCC-eEEEEeCCCeEEEEEeecCCC
Q 014222 345 NSRALEAAALVPLNG-KLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 345 ~~~~~~~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.. .......++ ++++.++.++. +.+||..+
T Consensus 307 ~v----~~~~~s~~~~~~l~s~~~d~~--i~iw~~~~ 337 (416)
T 2pm9_A 307 WC----FKTKFAPEAPDLFACASFDNK--IEVQTLQN 337 (416)
T ss_dssp CC----CCEEECTTCTTEEEECCSSSE--EEEEESCC
T ss_pred ce----EEEEECCCCCCEEEEEecCCc--EEEEEccC
Confidence 11 123333445 78888876543 55677665
No 115
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.38 E-value=0.66 Score=43.46 Aligned_cols=217 Identities=8% Similarity=0.034 Sum_probs=106.2
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcc-eee
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHF-FGS 211 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~-~~~ 211 (428)
.+.+||..+++-...-.... ..-.+++...++.+++.|+.+ ..+.+||..+.+-.. .+...... .++
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~~~~--~~~~h~~~v~~~ 187 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHV----SEITKLKFFPSGEALISSSQD------MQLKIWSVKDGSNPR--TLIGHRATVTDI 187 (420)
T ss_dssp CEEEECTTSCEEEEETTSSS----SCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCCCE--EEECCSSCEEEE
T ss_pred CEEEEeCCCcceeeeccccc----CccEEEEECCCCCEEEEEeCC------CeEEEEeCCCCcCce--EEcCCCCcEEEE
Confidence 67888988766443311111 122344444333566777654 368899987654211 11111111 122
Q ss_pred EEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEc-CCCCCCccceE-EEE----------------------ECCE
Q 014222 212 CVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFI-SDMSTAMVPFI-GVV----------------------YEGK 266 (428)
Q Consensus 212 ~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~-~~~p~~~~~~~-~~~----------------------~~g~ 266 (428)
+.. ++..++.|+.+ ..+.+||..+.+-... ........... .+. -+++
T Consensus 188 ~~~~~~~~l~s~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (420)
T 3vl1_A 188 AIIDRGRNVLSASLD-------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK 260 (420)
T ss_dssp EEETTTTEEEEEETT-------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE
T ss_pred EEcCCCCEEEEEcCC-------CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC
Confidence 222 55666666654 4688999887653222 11111111111 111 2566
Q ss_pred EEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCe-EEEEEccCCcEEEEEeCCCCceeeCccccccc
Q 014222 267 WFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRH-LYALDCKDGCKIRVYDEVTDSWSKHIDSKMHL 343 (428)
Q Consensus 267 lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~-lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~ 343 (428)
+.+.|+... .+..||..+.+-..... .........+.+ ++. +++.|+.++ .|.+||..+..-. +..+....
T Consensus 261 ~l~~~~~dg---~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~g~~dg-~i~vwd~~~~~~~-~~~~~~~~ 334 (420)
T 3vl1_A 261 YVIAGHVSG---VITVHNVFSKEQTIQLP-SKFTCSCNSLTVDGNNANYIYAGYENG-MLAQWDLRSPECP-VGEFLINE 334 (420)
T ss_dssp EEEEEETTS---CEEEEETTTCCEEEEEC-CTTSSCEEEEEECSSCTTEEEEEETTS-EEEEEETTCTTSC-SEEEEEST
T ss_pred EEEEEcCCC---eEEEEECCCCceeEEcc-cccCCCceeEEEeCCCCCEEEEEeCCC-eEEEEEcCCCcCc-hhhhhccC
Confidence 666665432 36789987765322211 000111112222 444 777777654 8999999875321 11111111
Q ss_pred CCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 344 GNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 344 ~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
... -..+...++++++.|+.++. +.+||...
T Consensus 335 ~~~----v~~~~~~~~~~l~s~~~d~~--v~iw~~~~ 365 (420)
T 3vl1_A 335 GTP----INNVYFAAGALFVSSGFDTS--IKLDIISD 365 (420)
T ss_dssp TSC----EEEEEEETTEEEEEETTTEE--EEEEEECC
T ss_pred CCC----ceEEEeCCCCEEEEecCCcc--EEEEeccC
Confidence 111 13445567888888887654 45566544
No 116
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.35 E-value=0.2 Score=45.87 Aligned_cols=231 Identities=10% Similarity=0.043 Sum_probs=102.7
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCC-----ceeeCCCCCcCCc
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTN-----KWHRAPDMLRRRH 207 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~-----~W~~~~~~~~~r~ 207 (428)
.+.+||..++....+..+........-.+++...++.+++.|+.++ .+.+||..+. .+..+..+.....
T Consensus 35 ~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~------~v~iw~~~~~~~~~~~~~~~~~~~~h~~ 108 (330)
T 2hes_X 35 KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS------TVSIWAKEESADRTFEMDLLAIIEGHEN 108 (330)
T ss_dssp CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS------CEEEEEC-------CCCEEEEEEC----
T ss_pred EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC------cEEEEEcccCcCccccceeEEEEcCCCC
Confidence 5777888765443322221100011123333333335777777553 4677776432 1222111111111
Q ss_pred ceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCC--CceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEE
Q 014222 208 FFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNK--NRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSE 281 (428)
Q Consensus 208 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t--~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~ 281 (428)
....+.+ +++.++.|+.+ ..+.+||... ..+..+..+.........+.. ++.+++.|+.+. .+.
T Consensus 109 ~V~~v~~sp~g~~las~s~D-------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~---~i~ 178 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRD-------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD---TVR 178 (330)
T ss_dssp CEEEEEECTTSCEEEEEETT-------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS---CEE
T ss_pred cEEEEEECCCCCEEEEEeCC-------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC---eEE
Confidence 1112222 56677777754 5788898843 234433222211111222222 566666665432 356
Q ss_pred EEeCCCCCeEecCCCCcCCCCCceEEE--C--CeEEEEEccCCcEEEEEeCCCC------ceeeCcccccccCCcccccc
Q 014222 282 AYQPETDSWFPVYDGMVAGWRNPSASL--N--RHLYALDCKDGCKIRVYDEVTD------SWSKHIDSKMHLGNSRALEA 351 (428)
Q Consensus 282 ~yd~~~~~W~~~~~~~~~~~~~~~~~~--~--~~lyv~gG~~~~~i~~yd~~~~------~W~~v~~~~~~~~~~~~~~~ 351 (428)
.||..++.|..+............+.+ + +...+.|+.++ .|.+||..+. .|..+..++...... -
T Consensus 179 iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~----v 253 (330)
T 2hes_X 179 IWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQ----V 253 (330)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-CEEEEEEEEECTTSCEEEEEEEECCSCCSSC----E
T ss_pred EEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-eEEEEEecCCCccccceeEEeeecccccccc----e
Confidence 777777767655331111111112222 2 34556666554 6777776432 455444332211111 1
Q ss_pred eEEEEeCCeEEEEeCCCeEEEEEeecCCCCCCCcccccccee
Q 014222 352 AALVPLNGKLCIIRNNMSISLVDVSKSNGERGASAEHLWETI 393 (428)
Q Consensus 352 ~~~~~~~~~lyv~GG~~~~~~v~~yd~~~~~~~~~~~~W~~~ 393 (428)
.++....+.+++.||.++ .+.+||..+ ..|+.+
T Consensus 254 ~~v~~s~~~~l~s~~~dg--~v~iw~~~~-------~~~~~~ 286 (330)
T 2hes_X 254 YNVAWGFNGLIASVGADG--VLAVYEEVD-------GEWKVF 286 (330)
T ss_dssp EEEEECTTSCEEEEETTS--CEEEEEEET-------TEEEEE
T ss_pred EEEEEcCCCEEEEEeCCC--EEEEEEcCC-------CceEEE
Confidence 222222444566666554 355677766 666554
No 117
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.35 E-value=0.1 Score=47.81 Aligned_cols=189 Identities=10% Similarity=-0.029 Sum_probs=92.9
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeC---CEEEEEeeeCCCCCCCceEEEEECCCC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSG---CHLYLFGGKDPLKGSMRRVIFYSARTN 194 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~---~~lyv~GG~~~~~~~~~~v~~yd~~t~ 194 (428)
+..+++.|+.......+.+||..+++.......... ..-.+++...+ +.+++.|+.++ .+.+||..+.
T Consensus 30 ~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l~~~~~dg------~i~iwd~~~~ 100 (357)
T 3i2n_A 30 SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKA---KPIKCGTFGATSLQQRYLATGDFGG------NLHIWNLEAP 100 (357)
T ss_dssp SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEES---SCEEEEECTTCCTTTCCEEEEETTS------CEEEECTTSC
T ss_pred CceEEEecCccCCCcEEEEEeCCCCcccceeeeccc---CcEEEEEEcCCCCCCceEEEecCCC------eEEEEeCCCC
Confidence 345666664322345788899888775443221111 11122222222 25667776542 5888888776
Q ss_pred c--eeeCCCCCcCCcceeeE-------EECCEEEEEccccCCCCCCCCeEEEEeCCCCc--eEEcCCCCCC-ccceEEEE
Q 014222 195 K--WHRAPDMLRRRHFFGSC-------VINNCLYVAGGENGGVHRSLRSAEVYDPNKNR--WSFISDMSTA-MVPFIGVV 262 (428)
Q Consensus 195 ~--W~~~~~~~~~r~~~~~~-------~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~-~~~~~~~~ 262 (428)
+ -..+.....+ -..+. .-++..++.|+.+ ..+.+||..+.. ...+...... ........
T Consensus 101 ~~~~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 101 EMPVYSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRD-------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp SSCSEEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETT-------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred CccEEEEEecccc--eEEEeeccccccCCCccEEEEEeCC-------CeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 5 1111111111 01111 1245566666653 478899998764 3333322211 11111222
Q ss_pred ------ECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE-----CCeEEEEEccCCcEEEEEeCCCC
Q 014222 263 ------YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL-----NRHLYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 263 ------~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-----~~~lyv~gG~~~~~i~~yd~~~~ 331 (428)
-++.+++.|+.. ..+..||..+.+-....... .....+.+ ++..+++|+.++ .|.+||..+.
T Consensus 172 ~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~ 244 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDN---GDIKLFDLRNMALRWETNIK---NGVCSLEFDRKDISMNKLVATSLEG-KFHVFDMRTQ 244 (357)
T ss_dssp EECCCC-CCCEEEEEETT---SEEEEEETTTTEEEEEEECS---SCEEEEEESCSSSSCCEEEEEESTT-EEEEEEEEEE
T ss_pred EEeccCCCCCEEEEEccC---CeEEEEECccCceeeecCCC---CceEEEEcCCCCCCCCEEEEECCCC-eEEEEeCcCC
Confidence 366766666542 24778998877643222111 11112222 567777776654 7889987754
No 118
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.34 E-value=0.71 Score=43.42 Aligned_cols=213 Identities=14% Similarity=0.070 Sum_probs=117.3
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCC--CCcCCcc
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPD--MLRRRHF 208 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~--~~~~r~~ 208 (428)
..+..+|+.......+.... ..-.+++.. .++.||+.-- ....++++++.....+.+.. +..+
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~-----~~~~gl~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~~~~~~~~~~~p--- 161 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNL-----ENAIALDFHHRRELVFWSDV------TLDRILRANLNGSNVEEVVSTGLESP--- 161 (386)
T ss_dssp SCEEEECTTSCCCEEEECSC-----SCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCCEEEEECSSCSCC---
T ss_pred ccceeeccCCCcEEEEecCC-----CccEEEEEecCCCeEEEEeC------CCCcEEEEecCCCCcEEEEeCCCCCc---
Confidence 36788888877665543321 123345544 2348998832 23579999998776554422 2222
Q ss_pred eeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEe
Q 014222 209 FGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQ 284 (428)
Q Consensus 209 ~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd 284 (428)
.++++ .++.||+.-.. ...++++++....-+.+..-.. .....+++- ++.||+..... ...|+++|
T Consensus 162 ~glavd~~~g~lY~~d~~-------~~~I~~~~~dg~~~~~l~~~~l-~~P~giavdp~~g~ly~td~~~--~~~I~r~~ 231 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSG-------TSRIEVANLDGAHRKVLLWQSL-EKPRAIALHPMEGTIYWTDWGN--TPRIEASS 231 (386)
T ss_dssp CCEEEETTTTEEEEEETT-------TTEEEECBTTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEECSS--SCEEEEEE
T ss_pred cEEEEEeCCCeEEEEcCC-------CCeEEEEeCCCCceEEeecCCC-CCCcEEEEEcCCCeEEEeccCC--CCEEEEEe
Confidence 23444 37899997543 2578888887654333321110 111223333 68999874322 24588999
Q ss_pred CCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEE
Q 014222 285 PETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLC 362 (428)
Q Consensus 285 ~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~ly 362 (428)
+....-+.+.. .....-.+.++ .+++||+..... ..|+++|.+...-..+... ....+ .+++..++.||
T Consensus 232 ~dG~~~~~~~~-~~~~~PnGlavd~~~~~lY~aD~~~-~~I~~~d~dG~~~~~~~~~--~~~~P-----~giav~~~~ly 302 (386)
T 3v65_B 232 MDGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKH-HVIERANLDGSHRKAVISQ--GLPHP-----FAITVFEDSLY 302 (386)
T ss_dssp TTSCSCEEEEC-SSCSCEEEEEEEGGGTEEEEEETTT-TEEEEECTTSCSCEEEECS--SCSSE-----EEEEEETTEEE
T ss_pred CCCCCcEEEEE-CCCCCeeeEEEeCCCCEEEEEECCC-CEEEEEeCCCCeeEEEEEC--CCCCc-----eEEEEECCEEE
Confidence 87554333321 11111112333 378999998644 5899999876433332211 12222 45556899999
Q ss_pred EEeCCCeEEEEEeecCC
Q 014222 363 IIRNNMSISLVDVSKSN 379 (428)
Q Consensus 363 v~GG~~~~~~v~~yd~~ 379 (428)
+..-.. ..|..+|..
T Consensus 303 ~td~~~--~~V~~~~~~ 317 (386)
T 3v65_B 303 WTDWHT--KSINSANKF 317 (386)
T ss_dssp EEETTT--TEEEEEETT
T ss_pred EeeCCC--CeEEEEECC
Confidence 986432 246677743
No 119
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.34 E-value=0.91 Score=46.41 Aligned_cols=232 Identities=8% Similarity=-0.033 Sum_probs=118.8
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCC----------CCCceEEEEECCCCcee--e
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLK----------GSMRRVIFYSARTNKWH--R 198 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~----------~~~~~v~~yd~~t~~W~--~ 198 (428)
..++++|..+++...... .. ....+++.. +|..||. +..+... .....+++++..+.+.. .
T Consensus 151 ~~i~v~d~~tg~~~~~~~-~~----~~~~~~~wspDg~~l~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~ 224 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVL-ER----VKFSCMAWTHDGKGMFY-NAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDIL 224 (710)
T ss_dssp EEEEEEETTTTEEEEEEE-EE----ECSCCEEECTTSSEEEE-EECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEE
T ss_pred EEEEEEECCCCCCCcccc-cC----cccceEEEEeCCCEEEE-EEECCccccccccccccCCCCEEEEEECCCCcccceE
Confidence 478999999988765311 11 011223333 4433444 3332210 12456999999887643 1
Q ss_pred CCCCC-cCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCC------C--ceEEcCCCCCCccceEEEEECCEEE
Q 014222 199 APDML-RRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNK------N--RWSFISDMSTAMVPFIGVVYEGKWF 268 (428)
Q Consensus 199 ~~~~~-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t------~--~W~~~~~~p~~~~~~~~~~~~g~ly 268 (428)
+...+ .+.....+.. -+++..++..... ......++.+|..+ . .+..+........ .....-++.||
T Consensus 225 v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~ 301 (710)
T 2xdw_A 225 CAEFPDEPKWMGGAELSDDGRYVLLSIREG--CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFT 301 (710)
T ss_dssp EECCTTCTTCEEEEEECTTSCEEEEEEECS--SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEE
T ss_pred EeccCCCCeEEEEEEEcCCCCEEEEEEEcc--CCCccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEE
Confidence 11111 1222222222 2454333333211 11246889999876 3 5776654322222 12233467788
Q ss_pred EEecCCCCceeEEEEeCCCC---CeEecCCCCcCCCCCceEEE-CCeEEEEEccCC-cEEEEEeCCCCc-eeeCcccccc
Q 014222 269 LKGLGSHRQVLSEAYQPETD---SWFPVYDGMVAGWRNPSASL-NRHLYALDCKDG-CKIRVYDEVTDS-WSKHIDSKMH 342 (428)
Q Consensus 269 v~Gg~~~~~~~i~~yd~~~~---~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~-~~i~~yd~~~~~-W~~v~~~~~~ 342 (428)
+.+........++.+|+.+. .|+.+........-...... ++.|++....++ ..|+++|+.+++ ...+.. +
T Consensus 302 ~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~-~-- 378 (710)
T 2xdw_A 302 FKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPL-E-- 378 (710)
T ss_dssp EEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECC-C--
T ss_pred EEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCC-C--
Confidence 88654444556889998775 58877542221111123345 778888776555 468999985543 344331 1
Q ss_pred cCCcccccceEEE-EeC-CeEEEE-eCCCeEEEEEeecCCC
Q 014222 343 LGNSRALEAAALV-PLN-GKLCII-RNNMSISLVDVSKSNG 380 (428)
Q Consensus 343 ~~~~~~~~~~~~~-~~~-~~lyv~-GG~~~~~~v~~yd~~~ 380 (428)
.+. ...+. ..+ +.|++. .+......++.||..+
T Consensus 379 ~~~-----v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 379 VGS-----VVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp SSE-----EEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred Cce-----EEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 111 11111 113 345543 4445556789999987
No 120
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.33 E-value=0.76 Score=46.86 Aligned_cols=243 Identities=9% Similarity=-0.018 Sum_probs=121.8
Q ss_pred ceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCC-------CCCceEEEEECCCCcee--eCCC
Q 014222 131 KISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLK-------GSMRRVIFYSARTNKWH--RAPD 201 (428)
Q Consensus 131 ~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~-------~~~~~v~~yd~~t~~W~--~~~~ 201 (428)
...++++|..+++......++. ....+++-..+++.++++..+... .....+++++..+..-. .+..
T Consensus 146 ~~~i~v~dl~tg~~~~~~~~~~----~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~ 221 (695)
T 2bkl_A 146 EAVLHVIDVDSGEWSKVDVIEG----GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHE 221 (695)
T ss_dssp CCEEEEEETTTCCBCSSCCBSC----CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEEC
T ss_pred eEEEEEEECCCCCCcCCcccCc----ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEe
Confidence 3579999999987531111111 111233333333555555443210 12456999998877632 2211
Q ss_pred CCcC-CcceeeE-EECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCcee
Q 014222 202 MLRR-RHFFGSC-VINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVL 279 (428)
Q Consensus 202 ~~~~-r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~ 279 (428)
.+.. ....+.. .-+|+..++..... .....++.+|..+..|..+..-.... ...+..+|.+|+..........
T Consensus 222 ~~~~~~~~~~~~~SpDG~~l~~~~~~~---~~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~~~~~~ 296 (695)
T 2bkl_A 222 RTGDPTTFLQSDLSRDGKYLFVYILRG---WSENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEGAPRQR 296 (695)
T ss_dssp CCCCTTCEEEEEECTTSCCEEEEEEET---TTEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTTCTTCE
T ss_pred cCCCCEEEEEEEECCCCCEEEEEEeCC---CCceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCCCCCCE
Confidence 1111 1222222 22455444444321 02346777787777787775432222 2222357776665433333456
Q ss_pred EEEEeCCCCC---eEecCCCCcCCCCCceEEECCeEEEEEccCC-cEEEEEeCCCCceeeCcccccccCCcccccceEEE
Q 014222 280 SEAYQPETDS---WFPVYDGMVAGWRNPSASLNRHLYALDCKDG-CKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALV 355 (428)
Q Consensus 280 i~~yd~~~~~---W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~-~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~ 355 (428)
++.+|+.+.. |+.+........-......+++|++....++ ..++.+|...+.-..+.. +. .+.. .+.+..
T Consensus 297 l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~-~~~v---~~~~~s 371 (695)
T 2bkl_A 297 VFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQL-PG-VGAA---SNLMGL 371 (695)
T ss_dssp EEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEECCC-SS-SSEE---CCCBSC
T ss_pred EEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecC-CC-CeEE---EEeecC
Confidence 8899987654 8877542211111223345888888876554 468889976554444321 10 1100 001111
Q ss_pred EeCCeEEEE-eCCCeEEEEEeecCCCCCCCccccccceec
Q 014222 356 PLNGKLCII-RNNMSISLVDVSKSNGERGASAEHLWETIS 394 (428)
Q Consensus 356 ~~~~~lyv~-GG~~~~~~v~~yd~~~~~~~~~~~~W~~~~ 394 (428)
..++.|++. .+......++.||..+ ...+.+.
T Consensus 372 ~d~~~l~~~~ss~~~P~~v~~~d~~~-------g~~~~l~ 404 (695)
T 2bkl_A 372 EDLDDAYYVFTSFTTPRQIYKTSVST-------GKSELWA 404 (695)
T ss_dssp TTCSEEEEEEEETTEEEEEEEEETTT-------CCEEEEE
T ss_pred CCCCEEEEEEcCCCCCCEEEEEECCC-------CcEEEEe
Confidence 123344443 3455567899999988 5555554
No 121
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.30 E-value=0.13 Score=47.23 Aligned_cols=139 Identities=9% Similarity=0.042 Sum_probs=67.4
Q ss_pred eEEEEeCCCCce-EeCCCCCCCCccccccEEEEEeC----CEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCc
Q 014222 133 SWHAFDPIYQLW-QPLPPIPKEYSEALGFGCAVLSG----CHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRH 207 (428)
Q Consensus 133 ~~~~yd~~~~~W-~~l~~~~~~~~~r~~~~~~~~~~----~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~ 207 (428)
.+.+||..+++. ..+.....+.....-.+++...+ +.+++.|+.+ ..+.+||..+.+-... +.....
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d------g~i~v~d~~~~~~~~~--~~~~~~ 116 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR------GIIRIINPITMQCIKH--YVGHGN 116 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT------CEEEEECTTTCCEEEE--EESCCS
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC------CEEEEEEchhceEeee--ecCCCC
Confidence 677888775543 22221111100111223333322 2577777754 2688999887653221 111111
Q ss_pred ce-eeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEc-CCCCCCccceEEEEE--CCEEEEEecCCCCceeEE
Q 014222 208 FF-GSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFI-SDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSE 281 (428)
Q Consensus 208 ~~-~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~-~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~ 281 (428)
.. .+... ++.+++.|+.+ ..+.+||..+.+-... ..+.........+.. ++...+.|+.+. .+.
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~ 186 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKD-------HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH---SLK 186 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETT-------SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS---CEE
T ss_pred cEEEEEECCCCCCEEEEEeCC-------CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCC---CEE
Confidence 11 22222 56677777764 5789999988754332 111111112222222 455555555422 467
Q ss_pred EEeCCCCC
Q 014222 282 AYQPETDS 289 (428)
Q Consensus 282 ~yd~~~~~ 289 (428)
.||..+.+
T Consensus 187 i~d~~~~~ 194 (366)
T 3k26_A 187 LWRINSKR 194 (366)
T ss_dssp EEESCSHH
T ss_pred EEECCCCc
Confidence 88887653
No 122
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.30 E-value=0.27 Score=44.71 Aligned_cols=203 Identities=12% Similarity=0.060 Sum_probs=101.6
Q ss_pred EEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEe
Q 014222 161 GCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYD 239 (428)
Q Consensus 161 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd 239 (428)
+++...++.||+.+.. ...+++||+.+++...+.... ...-.+++. -++++|+..... ......+.+||
T Consensus 49 ~~~~~~~g~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~---~~~~~~i~~~d 118 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVF------EGNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGD---FKSTGGIFAAT 118 (333)
T ss_dssp EEEECTTSCEEEEETT------TCEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTT---SSSCCEEEEEC
T ss_pred CcEECCCCCEEEEECC------CCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCC---CCCCceEEEEe
Confidence 3344333368887543 237999999988876543111 111222333 267888865432 11225789999
Q ss_pred CCCCceEE-cCCCCCCccceEEE-EECCEEEEEecCC---CCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CC-e
Q 014222 240 PNKNRWSF-ISDMSTAMVPFIGV-VYEGKWFLKGLGS---HRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NR-H 311 (428)
Q Consensus 240 ~~t~~W~~-~~~~p~~~~~~~~~-~~~g~lyv~Gg~~---~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~ 311 (428)
+.+..... +...........++ .-+|++|+..... .....++.||+.+.+...+.... . ......+ ++ .
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~-~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI--S-VANGIALSTDEKV 195 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE--S-SEEEEEECTTSSE
T ss_pred CCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC--C-cccceEECCCCCE
Confidence 99887653 22221111111222 2267888864321 12345889999877766543211 0 1112222 44 4
Q ss_pred EEEEEccCCcEEEEEeCCCC--ceeeCcc-cccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 312 LYALDCKDGCKIRVYDEVTD--SWSKHID-SKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 312 lyv~gG~~~~~i~~yd~~~~--~W~~v~~-~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
||+..... ..|++||.+++ ....+.. ........ ......++.-+++||+..... ..+.+||++.
T Consensus 196 l~v~~~~~-~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~--~~v~~~d~~g 263 (333)
T 2dg1_A 196 LWVTETTA-NRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQ--GRVLVFNKRG 263 (333)
T ss_dssp EEEEEGGG-TEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETT--TEEEEECTTS
T ss_pred EEEEeCCC-CeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCC--CEEEEECCCC
Confidence 88776433 48999998642 3332210 00000000 000122333467888875322 2467788865
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.27 E-value=0.66 Score=42.41 Aligned_cols=148 Identities=9% Similarity=0.157 Sum_probs=74.9
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceE-
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWS- 246 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~- 246 (428)
..++.|+.++ .+.+||..+++-..+........-.+++. -++.+++.|+.+ ..+.+||..+.+-.
T Consensus 140 ~~l~s~s~dg------~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-------g~i~iwd~~~~~~~~ 206 (343)
T 3lrv_A 140 EYFIWADNRG------TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-------GILDVYNLSSPDQAS 206 (343)
T ss_dssp CEEEEEETTC------CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT-------SCEEEEESSCTTSCC
T ss_pred CEEEEEeCCC------cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC-------CEEEEEECCCCCCCc
Confidence 5777777543 58899988876543221111111112222 257777777754 57899999887532
Q ss_pred -EcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeE-ecCCCCcCCCCC--ceEEE--CCeEEEEEcc
Q 014222 247 -FISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWF-PVYDGMVAGWRN--PSASL--NRHLYALDCK 318 (428)
Q Consensus 247 -~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~-~~~~~~~~~~~~--~~~~~--~~~lyv~gG~ 318 (428)
.+.. ... .....+.+ ++...+.|+.. .+..||..+.+=. .+.......... .++.+ +++.++.++.
T Consensus 207 ~~~~~-~h~-~~v~~l~fs~~g~~l~s~~~~----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 207 SRFPV-DEE-AKIKEVKFADNGYWMVVECDQ----TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp EECCC-CTT-SCEEEEEECTTSSEEEEEESS----BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred cEEec-cCC-CCEEEEEEeCCCCEEEEEeCC----eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 2221 011 11222222 56666666532 5788998776421 111100000111 12333 5666666554
Q ss_pred CCcEEEEEe--CCCCceee
Q 014222 319 DGCKIRVYD--EVTDSWSK 335 (428)
Q Consensus 319 ~~~~i~~yd--~~~~~W~~ 335 (428)
....+.+|+ ...+.|..
T Consensus 281 ~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 281 ESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp TTTEEEEEEECTTTCSEEE
T ss_pred CCCcEEEEEEcccccceEe
Confidence 233555555 46678987
No 124
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.52 Score=42.97 Aligned_cols=220 Identities=9% Similarity=0.022 Sum_probs=101.5
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++-... +... ...-.+++...+++.++.|+.+ ..+.+||..+.+....-.... .-..+.
T Consensus 55 ~i~vwd~~~~~~~~~--~~~h--~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~--~v~~~~ 122 (369)
T 3zwl_B 55 SASVWYSLNGERLGT--LDGH--TGTIWSIDVDCFTKYCVTGSAD------YSIKLWDVSNGQCVATWKSPV--PVKRVE 122 (369)
T ss_dssp CEEEEETTTCCEEEE--ECCC--SSCEEEEEECTTSSEEEEEETT------TEEEEEETTTCCEEEEEECSS--CEEEEE
T ss_pred EEEEEeCCCchhhhh--hhhc--CCcEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcEEEEeecCC--CeEEEE
Confidence 577888877653321 1111 0112333443333566776654 368899988776443322111 111122
Q ss_pred E-ECCEEEEEccccCCCCCCCCeEEEEeCCCCc----eEEcCCCCC-------CccceEEEEE--CCEEEEEecCCCCce
Q 014222 213 V-INNCLYVAGGENGGVHRSLRSAEVYDPNKNR----WSFISDMST-------AMVPFIGVVY--EGKWFLKGLGSHRQV 278 (428)
Q Consensus 213 ~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~----W~~~~~~p~-------~~~~~~~~~~--~g~lyv~Gg~~~~~~ 278 (428)
. -+++.++.++.+. ......+.+||..+.. +......+. .........+ ++++++.|+.. .
T Consensus 123 ~~~~~~~l~~~~~~~--~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g 197 (369)
T 3zwl_B 123 FSPCGNYFLAILDNV--MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD---G 197 (369)
T ss_dssp ECTTSSEEEEEECCB--TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT---S
T ss_pred EccCCCEEEEecCCc--cCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC---C
Confidence 2 2445555554321 1223567778776542 111111010 0001122222 55555555432 2
Q ss_pred eEEEEeCCCC-CeE-ecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEE
Q 014222 279 LSEAYQPETD-SWF-PVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAAL 354 (428)
Q Consensus 279 ~i~~yd~~~~-~W~-~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~ 354 (428)
.+..||..++ .-. .+.. . ......+.+ ++.++++++.++ .|.+||..+.+-...-..... .....
T Consensus 198 ~i~i~d~~~~~~~~~~~~~-~--~~~v~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~~-------~~~~~ 266 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSIDL-H--EKSISDMQFSPDLTYFITSSRDT-NSFLVDVSTLQVLKKYETDCP-------LNTAV 266 (369)
T ss_dssp EEEEEETTTTTEEEEEEEC-C--SSCEEEEEECTTSSEEEEEETTS-EEEEEETTTCCEEEEEECSSC-------EEEEE
T ss_pred EEEEEECCCCcEeEEEEec-C--CCceeEEEECCCCCEEEEecCCc-eEEEEECCCCceeeeecCCCC-------ceeEE
Confidence 4778998773 322 1211 1 111112222 667777776554 899999987654332221111 12333
Q ss_pred EEeCCeEEEEeCCCeE------------EEEEeecCCC
Q 014222 355 VPLNGKLCIIRNNMSI------------SLVDVSKSNG 380 (428)
Q Consensus 355 ~~~~~~lyv~GG~~~~------------~~v~~yd~~~ 380 (428)
...+++.+++|+.... ..+.+||..+
T Consensus 267 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 267 ITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp ECSSSSEEEEEECCC-------------CEEEEEETTT
T ss_pred ecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 4445666666554321 1567777665
No 125
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.26 E-value=0.28 Score=46.78 Aligned_cols=186 Identities=7% Similarity=-0.071 Sum_probs=90.6
Q ss_pred ceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE--eCCEEEEEeeeCCCCCCCceEEEEECCCCce
Q 014222 119 EWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL--SGCHLYLFGGKDPLKGSMRRVIFYSARTNKW 196 (428)
Q Consensus 119 ~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~--~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 196 (428)
+.+++.|+.. ..+.+||..+++-..+-..... ...-.+++.. ++ .+++.|+.++ .+.++|..++..
T Consensus 132 ~~~lasGs~d---g~i~lWd~~~~~~~~~~~~~gH--~~~V~~l~f~p~~~-~~l~s~s~D~------~v~iwd~~~~~~ 199 (435)
T 4e54_B 132 PSTVAVGSKG---GDIMLWNFGIKDKPTFIKGIGA--GGSITGLKFNPLNT-NQFYASSMEG------TTRLQDFKGNIL 199 (435)
T ss_dssp TTCEEEEETT---SCEEEECSSCCSCCEEECCCSS--SCCCCEEEECSSCT-TEEEEECSSS------CEEEEETTSCEE
T ss_pred CCEEEEEeCC---CEEEEEECCCCCceeEEEccCC--CCCEEEEEEeCCCC-CEEEEEeCCC------EEEEeeccCCce
Confidence 4455555321 2577888877653322222111 1122344443 34 5677776553 477889887765
Q ss_pred eeCCCCCcCCcc-eeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CC-EEEEEe
Q 014222 197 HRAPDMLRRRHF-FGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EG-KWFLKG 271 (428)
Q Consensus 197 ~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g-~lyv~G 271 (428)
..+......... .++.. -++++++.|+.+ ..+.+||.....-.. +.........+.+ ++ .+++.|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-------g~i~~wd~~~~~~~~---~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 200 RVFASSDTINIWFCSLDVSASSRMVVTGDNV-------GNVILLNMDGKELWN---LRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EEEECCSSCSCCCCCEEEETTTTEEEEECSS-------SBEEEEESSSCBCCC---SBCCSSCEEEEEECTTCSSEEEEE
T ss_pred eEEeccCCCCccEEEEEECCCCCEEEEEeCC-------CcEeeeccCcceeEE---EecccceEEeeeecCCCceEEEEe
Confidence 544322211111 12222 356777777754 478899987653222 2111112222333 33 355555
Q ss_pred cCCCCceeEEEEeCCCCCeEecCCCCcCCCCCc--eEE--ECCeEEEEEccCCcEEEEEeCCCC
Q 014222 272 LGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNP--SAS--LNRHLYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 272 g~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~--~~~--~~~~lyv~gG~~~~~i~~yd~~~~ 331 (428)
+.+. .+..||..+.+-..... ........ ++. -++..++.|+.++ .|.+||..+.
T Consensus 270 s~d~---~v~iwd~~~~~~~~~~~-~~~~h~~~v~~~~~spdg~~l~s~~~D~-~i~iwd~~~~ 328 (435)
T 4e54_B 270 SVDQ---TVKIWDLRQVRGKASFL-YSLPHRHPVNAACFSPDGARLLTTDQKS-EIRVYSASQW 328 (435)
T ss_dssp ETTS---BCCEEETTTCCSSSCCS-BCCBCSSCEEECCBCTTSSEEEEEESSS-CEEEEESSSS
T ss_pred cCcc---eeeEEecccccccceEE-EeeeccccccceeECCCCCeeEEEcCCC-EEEEEECCCC
Confidence 5432 35578886654221110 00011111 111 2567777777664 7999998754
No 126
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.24 E-value=0.4 Score=43.47 Aligned_cols=174 Identities=11% Similarity=0.068 Sum_probs=82.9
Q ss_pred eEEEEeCCCCc----eEeCCCCCCCCccccccEEEEEeCCE-EEEEeeeCCCCCCCceEEEEEC-CCCceeeCCCCCcCC
Q 014222 133 SWHAFDPIYQL----WQPLPPIPKEYSEALGFGCAVLSGCH-LYLFGGKDPLKGSMRRVIFYSA-RTNKWHRAPDMLRRR 206 (428)
Q Consensus 133 ~~~~yd~~~~~----W~~l~~~~~~~~~r~~~~~~~~~~~~-lyv~GG~~~~~~~~~~v~~yd~-~t~~W~~~~~~~~~r 206 (428)
.+.+||..+++ ...+.... ..-.+++...++. .++.|+.+ ..+.+||. .+++...+.......
T Consensus 34 ~v~iw~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~~d------g~i~~wd~~~~~~~~~~~~~~~~~ 102 (342)
T 1yfq_A 34 SLTVYKFDIQAKNVDLLQSLRYK-----HPLLCCNFIDNTDLQIYVGTVQ------GEILKVDLIGSPSFQALTNNEANL 102 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEEECS-----SCEEEEEEEESSSEEEEEEETT------SCEEEECSSSSSSEEECBSCCCCS
T ss_pred eEEEEEeCCCCccccceeeeecC-----CceEEEEECCCCCcEEEEEcCC------CeEEEEEeccCCceEeccccCCCC
Confidence 56677766655 22221111 1223444443336 66777654 26889999 887765554311111
Q ss_pred cceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCc-------eEEcCCCCCCccceEEEEECCEEEEEecCCCCcee
Q 014222 207 HFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNR-------WSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVL 279 (428)
Q Consensus 207 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~-------W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~ 279 (428)
.-..++...+.+++.|+.+ ..+.+||..+.. ...+..+.....-..+....+. ++.|+.. ..
T Consensus 103 ~v~~l~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~d---~~ 171 (342)
T 1yfq_A 103 GICRICKYGDDKLIAASWD-------GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMNN---SQ 171 (342)
T ss_dssp CEEEEEEETTTEEEEEETT-------SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-EEEEEST---TE
T ss_pred ceEEEEeCCCCEEEEEcCC-------CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-EEEEeCC---Ce
Confidence 1112222325555566653 578888876400 2222222222222233334455 4444322 24
Q ss_pred EEEEeCCC-CC--eEecCCCCcCCCCCceEEE---CCeEEEEEccCCcEEEEEeCCCC
Q 014222 280 SEAYQPET-DS--WFPVYDGMVAGWRNPSASL---NRHLYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 280 i~~yd~~~-~~--W~~~~~~~~~~~~~~~~~~---~~~lyv~gG~~~~~i~~yd~~~~ 331 (428)
+..||..+ .. ......... .....+.+ ++.++++|+.++ .+.+||.+..
T Consensus 172 i~i~d~~~~~~~~~~~~~~~~~--~~i~~i~~~~~~~~~l~~~~~dg-~i~i~~~~~~ 226 (342)
T 1yfq_A 172 VQWFRLPLCEDDNGTIEESGLK--YQIRDVALLPKEQEGYACSSIDG-RVAVEFFDDQ 226 (342)
T ss_dssp EEEEESSCCTTCCCEEEECSCS--SCEEEEEECSGGGCEEEEEETTS-EEEEEECCTT
T ss_pred EEEEECCccccccceeeecCCC--CceeEEEECCCCCCEEEEEecCC-cEEEEEEcCC
Confidence 67899877 33 222211111 11112222 567777777654 6777665543
No 127
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.22 E-value=0.43 Score=42.58 Aligned_cols=187 Identities=9% Similarity=0.066 Sum_probs=98.6
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCc--eeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCC-ce
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNK--WHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKN-RW 245 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~-~W 245 (428)
++++.|.. ...+.++|+.|++ |+.-..-. .......+.-+|++++.+ + ..+..||+..+ .|
T Consensus 6 ~~lv~~~~------~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~--~-------~~V~~~d~~G~~~W 69 (276)
T 3no2_A 6 HLLVGGSG------WNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY--S-------KGAKMITRDGRELW 69 (276)
T ss_dssp EEEEECTT------CSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC--B-------SEEEEECTTSCEEE
T ss_pred cEEEeeCC------CCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC--C-------CCEEEECCCCCEEE
Confidence 57776543 2478889987775 66432210 112222333477888832 1 46899998322 57
Q ss_pred EEcCCCCCCccceE-EEEECCEEEEEecCCCCceeEEEEeCCCC-CeEecCC-C---CcCCCCCceEEECCeEEEEEccC
Q 014222 246 SFISDMSTAMVPFI-GVVYEGKWFLKGLGSHRQVLSEAYQPETD-SWFPVYD-G---MVAGWRNPSASLNRHLYALDCKD 319 (428)
Q Consensus 246 ~~~~~~p~~~~~~~-~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~-~W~~~~~-~---~~~~~~~~~~~~~~~lyv~gG~~ 319 (428)
+.-.+ .....++ ...-+|++++..... ...++.+|+.-. .|+.-.. . ............+|.+++....
T Consensus 70 ~~~~~--~~~~~~~~~~~~dG~~lv~~~~~--~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~- 144 (276)
T 3no2_A 70 NIAAP--AGCEMQTARILPDGNALVAWCGH--PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA- 144 (276)
T ss_dssp EEECC--TTCEEEEEEECTTSCEEEEEEST--TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-
T ss_pred EEcCC--CCccccccEECCCCCEEEEecCC--CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-
Confidence 65432 1111122 233477877765431 234678887443 2443211 0 0001111123446777766643
Q ss_pred CcEEEEEeCCCC-ceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCCCCCCccccccce
Q 014222 320 GCKIRVYDEVTD-SWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNGERGASAEHLWET 392 (428)
Q Consensus 320 ~~~i~~yd~~~~-~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~~~~~~~~~~W~~ 392 (428)
...|.+||++.+ .|+.-.. ..+ .......++.+++.+.... .+..+|+.+ .+-.|+.
T Consensus 145 ~~~v~~~d~~G~~~w~~~~~-----~~~----~~~~~~~~g~~~v~~~~~~--~v~~~d~~t-----G~~~w~~ 202 (276)
T 3no2_A 145 TSEVREIAPNGQLLNSVKLS-----GTP----FSSAFLDNGDCLVACGDAH--CFVQLNLES-----NRIVRRV 202 (276)
T ss_dssp TTEEEEECTTSCEEEEEECS-----SCC----CEEEECTTSCEEEECBTTS--EEEEECTTT-----CCEEEEE
T ss_pred CCEEEEECCCCCEEEEEECC-----CCc----cceeEcCCCCEEEEeCCCC--eEEEEeCcC-----CcEEEEe
Confidence 358999999844 3654321 111 1344455788888776543 488999985 2245665
No 128
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.18 E-value=0.22 Score=47.21 Aligned_cols=144 Identities=11% Similarity=0.078 Sum_probs=74.5
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEE
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF 247 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~ 247 (428)
.+++.|+.++ .+.+||..+.+....-...... -..++. -++++++.|+.+ ..+.+||..+.+-
T Consensus 121 ~~l~s~s~Dg------~i~vwd~~~~~~~~~l~~h~~~-V~~v~~~~~~~~l~sgs~D-------~~i~iwd~~~~~~-- 184 (410)
T 1vyh_C 121 SVMVSASEDA------TIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCSAD-------MTIKLWDFQGFEC-- 184 (410)
T ss_dssp SEEEEEESSS------CEEEEETTTCCCCEEECCCSSC-EEEEEECTTSSEEEEEETT-------SCCCEEETTSSCE--
T ss_pred CEEEEEeCCC------eEEEEECCCCcEEEEEeccCCc-EEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCce--
Confidence 5777777653 5889998877543221111111 111222 256777777764 4677888876542
Q ss_pred cCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCCcEE
Q 014222 248 ISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDGCKI 323 (428)
Q Consensus 248 ~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i 323 (428)
+..+.........+.+ ++...+.|+.+ ..+..||..++.-...-. ........+. -++.+++.|+.++ .|
T Consensus 185 ~~~~~~h~~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~~~~~~~~~~--~h~~~v~~~~~~~~g~~l~s~s~D~-~v 258 (410)
T 1vyh_C 185 IRTMHGHDHNVSSVSIMPNGDHIVSASRD---KTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCSNDQ-TV 258 (410)
T ss_dssp EECCCCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETTTCCEEEEEE--CCSSCEEEEEECTTSSEEEEEETTS-CE
T ss_pred eEEEcCCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCcEEEEEe--CCCccEEEEEECCCCCEEEEEcCCC-eE
Confidence 2222211112222222 55655666542 246789988775322110 0000011122 2577777777664 78
Q ss_pred EEEeCCCCcee
Q 014222 324 RVYDEVTDSWS 334 (428)
Q Consensus 324 ~~yd~~~~~W~ 334 (428)
.+||..+..-.
T Consensus 259 ~vwd~~~~~~~ 269 (410)
T 1vyh_C 259 RVWVVATKECK 269 (410)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCcee
Confidence 99998776543
No 129
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.18 E-value=0.45 Score=43.98 Aligned_cols=176 Identities=15% Similarity=0.138 Sum_probs=87.7
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE----CCEEEEEccccCCCCCCCCeEEEEeCCCCc
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI----NNCLYVAGGENGGVHRSLRSAEVYDPNKNR 244 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~ 244 (428)
..++.|+.+ ..+.+||..+++-... +........+..+ ++..++.|+.+ ..+..||..+.+
T Consensus 167 ~~l~t~s~D------~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~D-------g~v~~wd~~~~~ 231 (354)
T 2pbi_B 167 MQILTASGD------GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCD-------KKAMVWDMRSGQ 231 (354)
T ss_dssp SEEEEEETT------SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETT-------SCEEEEETTTCC
T ss_pred CEEEEEeCC------CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCC-------CeEEEEECCCCc
Confidence 355555543 3688899887764321 1111111111111 35677777764 578999998876
Q ss_pred eEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCC
Q 014222 245 WSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDG 320 (428)
Q Consensus 245 W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~ 320 (428)
....-.... .....+.+ ++.+++.|+.+. .+..||..++.-...-...........+. .++.+.+.|+.+
T Consensus 232 ~~~~~~~h~--~~v~~v~~~p~~~~l~s~s~D~---~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d- 305 (354)
T 2pbi_B 232 CVQAFETHE--SDVNSVRYYPSGDAFASGSDDA---TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND- 305 (354)
T ss_dssp EEEEECCCS--SCEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-
T ss_pred EEEEecCCC--CCeEEEEEeCCCCEEEEEeCCC---eEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC-
Confidence 433211111 11222223 566666665432 36788987764322211111111111222 357777777655
Q ss_pred cEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEE
Q 014222 321 CKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSIS 371 (428)
Q Consensus 321 ~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~ 371 (428)
..|.+||..+.+ .+..+....... .......+++.++.|+.++.-
T Consensus 306 ~~i~vwd~~~~~--~~~~l~~h~~~v----~~l~~spdg~~l~sgs~D~~v 350 (354)
T 2pbi_B 306 YTINVWDVLKGS--RVSILFGHENRV----STLRVSPDGTAFCSGSWDHTL 350 (354)
T ss_dssp SCEEEEETTTCS--EEEEECCCSSCE----EEEEECTTSSCEEEEETTSEE
T ss_pred CcEEEEECCCCc--eEEEEECCCCcE----EEEEECCCCCEEEEEcCCCCE
Confidence 489999986653 222221111111 123344567778888766543
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.17 E-value=0.21 Score=49.55 Aligned_cols=223 Identities=9% Similarity=-0.083 Sum_probs=108.4
Q ss_pred eeEEEEeC--CCCceEeCCCCCCCCccccccEEEEE-----eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCC--
Q 014222 132 ISWHAFDP--IYQLWQPLPPIPKEYSEALGFGCAVL-----SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDM-- 202 (428)
Q Consensus 132 ~~~~~yd~--~~~~W~~l~~~~~~~~~r~~~~~~~~-----~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~-- 202 (428)
..+.+||. .+.+- +..++.. ..-.+++.. +|..+|+.... ...+.++|..|.+-...-+.
T Consensus 200 ~~V~v~D~~~~t~~~--~~~i~~g---~~p~~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~~~~~i~~~g 268 (543)
T 1nir_A 200 ARIDMIDLWAKEPTK--VAEIKIG---IEARSVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLEPKQIVSTRG 268 (543)
T ss_dssp SEEEEEETTSSSCEE--EEEEECC---SEEEEEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCCEEEEEECCE
T ss_pred CeEEEEECcCCCCcE--EEEEecC---CCcceEEeCCCcCCCCCEEEEEEcc------CCeEEEEeccccccceeecccC
Confidence 46788888 55442 2222221 122344554 45456665322 23688899887754332111
Q ss_pred ---------CcCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEE-EECCE-EEEE
Q 014222 203 ---------LRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGV-VYEGK-WFLK 270 (428)
Q Consensus 203 ---------~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~g~-lyv~ 270 (428)
+.+|....+... ++.+|+.... ...+.++|..+.+-..+..++.....+..+ .-+|+ +|+.
T Consensus 269 ~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-------~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va 341 (543)
T 1nir_A 269 MTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-------TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTA 341 (543)
T ss_dssp ECSSSCCEESCCCEEEEEECSSSSEEEEEETT-------TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEE
T ss_pred cccCccccccCCceEEEEECCCCCEEEEEECC-------CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEE
Confidence 111222222222 3455554432 258889998764321111111122222222 23566 4554
Q ss_pred ecCCCCceeEEEEeCCCCCeEecCC---CCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCC-----ceeeCcccc
Q 014222 271 GLGSHRQVLSEAYQPETDSWFPVYD---GMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTD-----SWSKHIDSK 340 (428)
Q Consensus 271 Gg~~~~~~~i~~yd~~~~~W~~~~~---~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~-----~W~~v~~~~ 340 (428)
+.. ...+.++|..+++-...-. .+...+ ...... ++.+|+.+......|.+||.++. .|+.+..++
T Consensus 342 ~~~---~~~v~v~D~~tg~l~~~i~~g~~ph~g~-g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 342 ANN---SNKVAVIDSKDRRLSALVDVGKTPHPGR-GANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp EGG---GTEEEEEETTTTEEEEEEECSSSBCCTT-CEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred ecC---CCeEEEEECCCCeEEEeeccCCCCCCCC-CcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE
Confidence 322 2246779999886443211 111111 111222 37788887654468999998762 398887765
Q ss_pred cccCCcccccceEEEEeC-CeEEEEe--CCC--eEEEEEeecCCC
Q 014222 341 MHLGNSRALEAAALVPLN-GKLCIIR--NNM--SISLVDVSKSNG 380 (428)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~-~~lyv~G--G~~--~~~~v~~yd~~~ 380 (428)
...+.. .+..+..+ ..||+-. +.. ....|.+||..+
T Consensus 418 ~~g~~~----~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 418 GQGGGS----LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN 458 (543)
T ss_dssp CSCSCC----CCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred cCCCCc----eEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC
Confidence 432111 12223334 4556532 111 144688999987
No 131
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.16 E-value=0.51 Score=44.23 Aligned_cols=214 Identities=12% Similarity=0.067 Sum_probs=98.4
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++-... +... ...-.+++...++..++.|+.+ ..+.+||..+++....-... ..-..++
T Consensus 146 ~i~iwd~~~~~~~~~--~~~h--~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~~~~~~~~~~~--~~v~~~~ 213 (393)
T 1erj_A 146 LIRIWDIENRKIVMI--LQGH--EQDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRTGQCSLTLSIE--DGVTTVA 213 (393)
T ss_dssp CEEEEETTTTEEEEE--ECCC--SSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECS--SCEEEEE
T ss_pred eEEEEECCCCcEEEE--EccC--CCCEEEEEEcCCCCEEEEecCC------CcEEEEECCCCeeEEEEEcC--CCcEEEE
Confidence 678889887654322 1111 0112334443333466666644 36888999887643321111 1111222
Q ss_pred EE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEE-cCCCC---CCcc-ceEEEEE--CCEEEEEecCCCCceeEEEE
Q 014222 213 VI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF-ISDMS---TAMV-PFIGVVY--EGKWFLKGLGSHRQVLSEAY 283 (428)
Q Consensus 213 ~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p---~~~~-~~~~~~~--~g~lyv~Gg~~~~~~~i~~y 283 (428)
.. ++++++.|+.+ ..+.+||..+..-.. +.... .... ....+.+ ++++.+.|+.+. .+..|
T Consensus 214 ~~~~~~~~l~~~s~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~---~v~~w 283 (393)
T 1erj_A 214 VSPGDGKYIAAGSLD-------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR---SVKLW 283 (393)
T ss_dssp ECSTTCCEEEEEETT-------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS---EEEEE
T ss_pred EECCCCCEEEEEcCC-------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC---EEEEE
Confidence 22 56777777764 478899988765322 11100 1111 1122222 566666665432 35677
Q ss_pred eCCCCCeEecCCCCc--------CCCCCc--eEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccc
Q 014222 284 QPETDSWFPVYDGMV--------AGWRNP--SAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEA 351 (428)
Q Consensus 284 d~~~~~W~~~~~~~~--------~~~~~~--~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~ 351 (428)
|..+..-......+. ...... .+. -++..++.|+.++ .|.+||..+.+-.. .+.......
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~-~v~iwd~~~~~~~~--~l~~h~~~v----- 355 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR-GVLFWDKKSGNPLL--MLQGHRNSV----- 355 (393)
T ss_dssp EC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS-EEEEEETTTCCEEE--EEECCSSCE-----
T ss_pred ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC-eEEEEECCCCeEEE--EECCCCCCE-----
Confidence 775532111000000 000011 122 2456666666654 89999988764221 111111111
Q ss_pred eEEEEe-------CCeEEEEeCCCeEEEEEee
Q 014222 352 AALVPL-------NGKLCIIRNNMSISLVDVS 376 (428)
Q Consensus 352 ~~~~~~-------~~~lyv~GG~~~~~~v~~y 376 (428)
.++... ++.+++.|+.++.-.+|-+
T Consensus 356 ~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 356 ISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp EEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred EEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 122221 4678888887775555544
No 132
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.07 E-value=0.18 Score=46.60 Aligned_cols=191 Identities=10% Similarity=0.047 Sum_probs=91.6
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCC-cC-Ccc-eeeEE-ECCEEEEEccccCCCCCCCCeEEE
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDML-RR-RHF-FGSCV-INNCLYVAGGENGGVHRSLRSAEV 237 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~-~~-r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~ 237 (428)
++...++ .++.|+.+ ..+.+||..+++-....... .. ... .+++. -+++.++.|+.+ ..+.+
T Consensus 88 ~~~s~d~-~l~~~s~d------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-------~~i~i 153 (344)
T 4gqb_B 88 LTWVGER-GILVASDS------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-------ICIKV 153 (344)
T ss_dssp EEEETTT-EEEEEETT------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-------SCEEE
T ss_pred EEEeCCC-eEEEEECC------CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-------CeEEE
Confidence 3334443 45566543 26888998877532221110 01 111 11222 256777777764 47899
Q ss_pred EeCCCCceEEcCCCCCCccceEEEEE--CC-EEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE---CCe
Q 014222 238 YDPNKNRWSFISDMSTAMVPFIGVVY--EG-KWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL---NRH 311 (428)
Q Consensus 238 yd~~t~~W~~~~~~p~~~~~~~~~~~--~g-~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~ 311 (428)
||..+.+-... +.........+.+ ++ .+++.|+.+. .+..||..+.+-...-..........++.+ +++
T Consensus 154 wd~~~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 228 (344)
T 4gqb_B 154 WDLAQQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSEDN---RILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSE 228 (344)
T ss_dssp EETTTTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETTS---CEEEEETTSSSCEEECC----CCCEEEEEECSSCTT
T ss_pred EECCCCcEEEE--EcCcCCceEEEEecCCCCCceeeecccc---ccccccccccceeeeeecceeeccceeeeecCCCCc
Confidence 99988753221 1111111112222 33 4666665432 367899887654322111111111112222 567
Q ss_pred EEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCC-eEEEEeCCCeEEEEEeecCCC
Q 014222 312 LYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNG-KLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 312 lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+++.|+.++ .|.+||..+.+ .+..+....... ....+..++ ++++.|+.+. .+.+||..+
T Consensus 229 ~l~sg~~dg-~v~~wd~~~~~--~~~~~~~h~~~v----~~v~fsp~g~~~lasgs~D~--~i~vwd~~~ 289 (344)
T 4gqb_B 229 VFVFGDENG-TVSLVDTKSTS--CVLSSAVHSQCV----TGLVFSPHSVPFLASLSEDC--SLAVLDSSL 289 (344)
T ss_dssp EEEEEETTS-EEEEEESCC----CCEEEECCSSCE----EEEEECSSSSCCEEEEETTS--CEEEECTTC
T ss_pred ceEEeccCC-cEEEEECCCCc--EEEEEcCCCCCE----EEEEEccCCCeEEEEEeCCC--eEEEEECCC
Confidence 888887664 89999987653 222222111111 112222233 6677777654 356788777
No 133
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.06 E-value=0.32 Score=43.72 Aligned_cols=193 Identities=8% Similarity=-0.049 Sum_probs=96.4
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
++.||+... ....+++||+.+++...+.. +. .-.+++...++++++.. ...+++||+.+++++
T Consensus 24 ~~~l~~~d~---~~~~i~~~d~~~~~~~~~~~-~~-----~~~~i~~~~dG~l~v~~--------~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 24 SNSLLFVDI---PAKKVCRWDSFTKQVQRVTM-DA-----PVSSVALRQSGGYVATI--------GTKFCALNWKEQSAV 86 (297)
T ss_dssp TTEEEEEET---TTTEEEEEETTTCCEEEEEC-SS-----CEEEEEEBTTSSEEEEE--------TTEEEEEETTTTEEE
T ss_pred CCEEEEEEC---CCCEEEEEECCCCcEEEEeC-CC-----ceEEEEECCCCCEEEEE--------CCeEEEEECCCCcEE
Confidence 456777652 23478999999876544321 11 12234444333566652 237899999999887
Q ss_pred eCCCCCc--CCcceeeEE--ECCEEEEEccccCC----CCCCCCeEEEEeCCCCceEEcC-CCCCCccceEEEEE-CC-E
Q 014222 198 RAPDMLR--RRHFFGSCV--INNCLYVAGGENGG----VHRSLRSAEVYDPNKNRWSFIS-DMSTAMVPFIGVVY-EG-K 266 (428)
Q Consensus 198 ~~~~~~~--~r~~~~~~~--~~~~iyv~GG~~~~----~~~~~~~v~~yd~~t~~W~~~~-~~p~~~~~~~~~~~-~g-~ 266 (428)
.+..... +........ -+|++|+....... .......++++|+... ...+. .+. .....+.. ++ .
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~---~pngi~~spdg~~ 162 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVD---ISNGLDWSLDHKI 162 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEES---BEEEEEECTTSCE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccc---cccceEEcCCCCE
Confidence 6643321 112122222 25788874321100 0112347888887633 22221 111 11122222 44 5
Q ss_pred EEEEecCCCCceeEEEEeC--CCCCeEe---cCCCCc-CCCCCceEE-ECCeEEEEEccCCcEEEEEeCCCCceee
Q 014222 267 WFLKGLGSHRQVLSEAYQP--ETDSWFP---VYDGMV-AGWRNPSAS-LNRHLYALDCKDGCKIRVYDEVTDSWSK 335 (428)
Q Consensus 267 lyv~Gg~~~~~~~i~~yd~--~~~~W~~---~~~~~~-~~~~~~~~~-~~~~lyv~gG~~~~~i~~yd~~~~~W~~ 335 (428)
+|+.... ...+++||. .+..... +..... ...-..+++ -+|.||+.... +..|.+||+++.+...
T Consensus 163 lyv~~~~---~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~-~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 163 FYYIDSL---SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN-GGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp EEEEEGG---GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET-TTEEEEECTTTCCEEE
T ss_pred EEEecCC---CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC-CCEEEEEcCCCceEEE
Confidence 8887532 224667764 5555431 111111 011011222 36889988643 3579999999766543
No 134
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.05 E-value=0.26 Score=44.28 Aligned_cols=191 Identities=8% Similarity=0.070 Sum_probs=95.8
Q ss_pred ceEEEEeeCCCCceeEEEEeCCCCceEeC-CCCCCCCccccccEEEEEeCCEEEEEeeeCC---------CCCCCceEEE
Q 014222 119 EWIYVIKRDREGKISWHAFDPIYQLWQPL-PPIPKEYSEALGFGCAVLSGCHLYLFGGKDP---------LKGSMRRVIF 188 (428)
Q Consensus 119 ~~l~v~gg~~~~~~~~~~yd~~~~~W~~l-~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~---------~~~~~~~v~~ 188 (428)
+.||+.... ..+.+||+. ++...+ ...........-..++...++.+|+...... .......+++
T Consensus 83 g~l~v~~~~----~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 83 NQLFVADMR----LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp SEEEEEETT----TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred CcEEEEECC----CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEE
Confidence 667776531 268899998 777665 3322111112234555544447887653221 1112357899
Q ss_pred EECCCCceeeCCC-CCcCCcceeeEEE-----CC-EEEEEccccCCCCCCCCeEEEEeCC-CCceEE---cCCCCCCc-c
Q 014222 189 YSARTNKWHRAPD-MLRRRHFFGSCVI-----NN-CLYVAGGENGGVHRSLRSAEVYDPN-KNRWSF---ISDMSTAM-V 256 (428)
Q Consensus 189 yd~~t~~W~~~~~-~~~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~v~~yd~~-t~~W~~---~~~~p~~~-~ 256 (428)
||+. .+...+.. ... ..+.+.. ++ .+|+.... ...+.+||+. +.+... ...++... .
T Consensus 158 ~~~~-g~~~~~~~~~~~---~~~i~~~~~~d~dg~~l~v~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T 1pjx_A 158 FTTD-GQMIQVDTAFQF---PNGIAVRHMNDGRPYQLIVAETP-------TKKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp ECTT-SCEEEEEEEESS---EEEEEEEECTTSCEEEEEEEETT-------TTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred ECCC-CCEEEeccCCCC---cceEEEecccCCCCCEEEEEECC-------CCeEEEEECCCCCccccceEEEECCCCCCC
Confidence 9986 55443311 111 1223333 34 57776432 2578889876 343321 11222111 1
Q ss_pred ceEEEE--ECCEEEEEecCCCCceeEEEEeCCCCCeE-ecCCCCcCCCCCceEEE--CCe-EEEEEccCCcEEEEEeCCC
Q 014222 257 PFIGVV--YEGKWFLKGLGSHRQVLSEAYQPETDSWF-PVYDGMVAGWRNPSASL--NRH-LYALDCKDGCKIRVYDEVT 330 (428)
Q Consensus 257 ~~~~~~--~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~-~~~~~~~~~~~~~~~~~--~~~-lyv~gG~~~~~i~~yd~~~ 330 (428)
...... -+|.+|+.... ...+.+||+.+.+.. .+.. +. .....+.+ +++ ||+....+ ..|++||++.
T Consensus 227 ~p~~i~~d~~G~l~v~~~~---~~~i~~~d~~~g~~~~~~~~-~~--~~~~~i~~~~dg~~l~v~~~~~-~~l~~~~~~~ 299 (314)
T 1pjx_A 227 GADGMDFDEDNNLLVANWG---SSHIEVFGPDGGQPKMRIRC-PF--EKPSNLHFKPQTKTIFVTEHEN-NAVWKFEWQR 299 (314)
T ss_dssp EEEEEEEBTTCCEEEEEET---TTEEEEECTTCBSCSEEEEC-SS--SCEEEEEECTTSSEEEEEETTT-TEEEEEECSS
T ss_pred CCCceEECCCCCEEEEEcC---CCEEEEEcCCCCcEeEEEeC-CC--CCceeEEECCCCCEEEEEeCCC-CeEEEEeCCC
Confidence 112222 26889987532 124789999855432 2221 11 11122332 455 88776543 4899999886
Q ss_pred Cc
Q 014222 331 DS 332 (428)
Q Consensus 331 ~~ 332 (428)
..
T Consensus 300 ~g 301 (314)
T 1pjx_A 300 NG 301 (314)
T ss_dssp CB
T ss_pred CC
Confidence 43
No 135
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.05 E-value=0.17 Score=47.11 Aligned_cols=197 Identities=9% Similarity=-0.085 Sum_probs=99.0
Q ss_pred CceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCE-EEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceE
Q 014222 183 MRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNC-LYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFI 259 (428)
Q Consensus 183 ~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~ 259 (428)
...++++|..+++...+... .......... +++ |++... . ........++.+|..+..+..+.. ..+.....
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~-~-~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~ 241 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHE-G-PHDLVDARMWLVNEDGSNVRKIKE-HAEGESCT 241 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEEC-S-CSSSCSCCCEEEETTSCCCEESSC-CCTTEEEE
T ss_pred cceEEEEECCCCcEEeeccC--CcccccceECCCCCCEEEEEec-C-CCCCCCceEEEEECCCCceeEeec-cCCCcccc
Confidence 45799999998877665421 1111122222 344 544432 1 111222578999998888777654 21111111
Q ss_pred EEE--ECCE-EEEEecC-CCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE-CCeEEEEEcc---------------C
Q 014222 260 GVV--YEGK-WFLKGLG-SHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL-NRHLYALDCK---------------D 319 (428)
Q Consensus 260 ~~~--~~g~-lyv~Gg~-~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~---------------~ 319 (428)
... -+|+ |++.... ......++.+|+.+++...+...+. .. ....- +++++++.+. .
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 122 2555 4444321 1112348899998888776643221 11 22233 7777766432 2
Q ss_pred CcEEEEEeCCCCceeeCcccccccCC---ccc-ccceEEEEeCC-eEEEEeCCCeEEEEEeecCCCCCCCccccccceec
Q 014222 320 GCKIRVYDEVTDSWSKHIDSKMHLGN---SRA-LEAAALVPLNG-KLCIIRNNMSISLVDVSKSNGERGASAEHLWETIS 394 (428)
Q Consensus 320 ~~~i~~yd~~~~~W~~v~~~~~~~~~---~~~-~~~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~~~~~~~~~~~W~~~~ 394 (428)
...|+.+|+++++...+......... .+. .........++ .|++.........++.+|..+ ..++++.
T Consensus 319 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~-------~~~~~~~ 391 (396)
T 3c5m_A 319 DPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPE-------SYKHLEH 391 (396)
T ss_dssp CCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCT-------TCC----
T ss_pred CCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcc-------ccccccc
Confidence 25799999998876655432210000 000 00011223344 566665544455688888888 6666654
No 136
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.03 E-value=0.65 Score=42.84 Aligned_cols=217 Identities=12% Similarity=0.145 Sum_probs=103.3
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCC----CCCcCCcc
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAP----DMLRRRHF 208 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~----~~~~~r~~ 208 (428)
.+.++|..+.+-...-..+. ..-.+++...++..++.||.+ ..+.+|+...+.-.... .+......
T Consensus 87 ~v~vWd~~~~~~~~~~~~~~----~~v~~~~~sp~g~~lasg~~d------~~i~v~~~~~~~~~~~~~~~~~~~~h~~~ 156 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTMPC----TWVMACAYAPSGCAIACGGLD------NKCSVYPLTFDKNENMAAKKKSVAMHTNY 156 (354)
T ss_dssp EEEEEETTTCCEEEEEECSS----SCCCEEEECTTSSEEEEESTT------SEEEEEECCCCTTCCSGGGCEEEEECSSC
T ss_pred eEEEEECCCCCcceEEecCC----CCEEEEEECCCCCEEEEeeCC------CCEEEEEEeccccccccccceeeeccCCc
Confidence 67778877665433212221 123344444343677777754 25677776543211110 00000111
Q ss_pred eeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE----CCEEEEEecCCCCceeEEE
Q 014222 209 FGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY----EGKWFLKGLGSHRQVLSEA 282 (428)
Q Consensus 209 ~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~----~g~lyv~Gg~~~~~~~i~~ 282 (428)
...+.+ ++..++.|+.+ ..+.+||..+.+-...-.-.. .......+ ++.+++.|+.+. .+..
T Consensus 157 v~~~~~~~~~~~l~t~s~D-------~~v~lwd~~~~~~~~~~~~h~--~~v~~~~~~~~~~g~~l~sgs~Dg---~v~~ 224 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASGD-------GTCALWDVESGQLLQSFHGHG--ADVLCLDLAPSETGNTFVSGGCDK---KAMV 224 (354)
T ss_dssp EEEEEECSSSSEEEEEETT-------SEEEEEETTTCCEEEEEECCS--SCEEEEEECCCSSCCEEEEEETTS---CEEE
T ss_pred EEEEEEeCCCCEEEEEeCC-------CcEEEEeCCCCeEEEEEcCCC--CCeEEEEEEeCCCCCEEEEEeCCC---eEEE
Confidence 111222 34445555543 578999998875432111011 11112222 345666665432 4678
Q ss_pred EeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCe
Q 014222 283 YQPETDSWFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGK 360 (428)
Q Consensus 283 yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~ 360 (428)
||..+.+....-... .....++.+ ++.+++.|+.++ .|.+||..+..-..+-...... . .........+++
T Consensus 225 wd~~~~~~~~~~~~h--~~~v~~v~~~p~~~~l~s~s~D~-~v~lwd~~~~~~~~~~~~~~~~--~--~~~~~~~s~~g~ 297 (354)
T 2pbi_B 225 WDMRSGQCVQAFETH--ESDVNSVRYYPSGDAFASGSDDA-TCRLYDLRADREVAIYSKESII--F--GASSVDFSLSGR 297 (354)
T ss_dssp EETTTCCEEEEECCC--SSCEEEEEECTTSSEEEEEETTS-CEEEEETTTTEEEEEECCTTCC--S--CEEEEEECTTSS
T ss_pred EECCCCcEEEEecCC--CCCeEEEEEeCCCCEEEEEeCCC-eEEEEECCCCcEEEEEcCCCcc--c--ceeEEEEeCCCC
Confidence 999887654321100 011112233 577777787664 7999998876432211100000 0 011233445677
Q ss_pred EEEEeCCCeEEEEEeecCCC
Q 014222 361 LCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 361 lyv~GG~~~~~~v~~yd~~~ 380 (428)
+++.|+.+. .+.+||..+
T Consensus 298 ~l~~g~~d~--~i~vwd~~~ 315 (354)
T 2pbi_B 298 LLFAGYNDY--TINVWDVLK 315 (354)
T ss_dssp EEEEEETTS--CEEEEETTT
T ss_pred EEEEEECCC--cEEEEECCC
Confidence 877777654 356788755
No 137
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.02 E-value=0.021 Score=53.28 Aligned_cols=147 Identities=17% Similarity=0.191 Sum_probs=72.1
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCc-e
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNR-W 245 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~-W 245 (428)
++++.|+.+ ..+.+||..++.|..+..+.........+.+ +++.++.|+.+ ..+.+||..+.. |
T Consensus 24 ~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-------~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 24 TEFVTTTAT------NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-------RNAYVYEKRPDGTW 90 (377)
T ss_dssp SEEECCCSS------SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-------SSEEEC------CC
T ss_pred CEEEEecCC------CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-------CeEEEEEcCCCCce
Confidence 566666544 2577888888888777666533332222222 46677777754 478899988876 4
Q ss_pred EEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCC-eEecCCCCcCCCC-CceEEE--CCeEEEEEccC
Q 014222 246 SFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDS-WFPVYDGMVAGWR-NPSASL--NRHLYALDCKD 319 (428)
Q Consensus 246 ~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~-W~~~~~~~~~~~~-~~~~~~--~~~lyv~gG~~ 319 (428)
.....+.........+.+ ++++++.|+.+. .+..||..+.+ |..+......... ...+.+ ++.+++.|+.+
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR---VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEESSS---CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEecCC---eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 433322211112222222 566666655422 36678887664 4333221110111 112222 56777777766
Q ss_pred CcEEEEEeCCCCc
Q 014222 320 GCKIRVYDEVTDS 332 (428)
Q Consensus 320 ~~~i~~yd~~~~~ 332 (428)
+ .|.+||..+..
T Consensus 168 ~-~i~iwd~~~~~ 179 (377)
T 3dwl_C 168 R-KAYVLSAYVRD 179 (377)
T ss_dssp S-CEEEEEECCSS
T ss_pred C-EEEEEEEEecc
Confidence 4 78889876443
No 138
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.98 E-value=0.35 Score=45.30 Aligned_cols=182 Identities=9% Similarity=-0.007 Sum_probs=87.4
Q ss_pred eEEEEeCCCCc------eE-eCCCCCCCCccccccEEEEEeC-CEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCc
Q 014222 133 SWHAFDPIYQL------WQ-PLPPIPKEYSEALGFGCAVLSG-CHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLR 204 (428)
Q Consensus 133 ~~~~yd~~~~~------W~-~l~~~~~~~~~r~~~~~~~~~~-~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~ 204 (428)
.+.+||..+.+ -. .+...... ...-.+++...+ ..+++.|+.++ .+.+||..+.+-...-....
T Consensus 137 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg------~v~iwd~~~~~~~~~~~~~~ 208 (416)
T 2pm9_A 137 EIFIWDMNKCTESPSNYTPLTPGQSMSS--VDEVISLAWNQSLAHVFASAGSSN------FASIWDLKAKKEVIHLSYTS 208 (416)
T ss_dssp CEEBCBTTTTSSCTTTCCCBCCCCSCCS--SCCCCEEEECSSCTTEEEEESSSS------CEEEEETTTTEEEEEECCCC
T ss_pred eEEEEECCCCccccccccccccccccCC--CCCeeEEEeCCCCCcEEEEEcCCC------CEEEEECCCCCcceEEeccc
Confidence 57788887765 11 11111111 112234444432 35777776542 58899998876443222211
Q ss_pred C----Cccee-eEEE-CC-EEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCC-CCccceEEEEE---CCEEEEEecC
Q 014222 205 R----RHFFG-SCVI-NN-CLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMS-TAMVPFIGVVY---EGKWFLKGLG 273 (428)
Q Consensus 205 ~----r~~~~-~~~~-~~-~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p-~~~~~~~~~~~---~g~lyv~Gg~ 273 (428)
. ..... ++.. ++ .+++.|+.+. ....+.+||..+..- .+..+. ........+.+ ++.+++.|+.
T Consensus 209 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 283 (416)
T 2pm9_A 209 PNSGIKQQLSVVEWHPKNSTRVATATGSD----NDPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGR 283 (416)
T ss_dssp CSSCCCCCEEEEEECSSCTTEEEEEECCS----SSCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEES
T ss_pred cccccCCceEEEEECCCCCCEEEEEECCC----CCceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeC
Confidence 0 11122 2222 23 5666666531 123788899887531 111222 11112222223 5666666654
Q ss_pred CCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE-ECC-eEEEEEccCCcEEEEEeCCCCc
Q 014222 274 SHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS-LNR-HLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 274 ~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~-~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
+ ..+..||..+.+-...-...... -...+. -++ .+++.++.++ .|.+||..+..
T Consensus 284 d---g~v~~wd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~l~s~~~d~-~i~iw~~~~~~ 339 (416)
T 2pm9_A 284 D---NTVLLWNPESAEQLSQFPARGNW-CFKTKFAPEAPDLFACASFDN-KIEVQTLQNLT 339 (416)
T ss_dssp S---SEEEEECSSSCCEEEEEECSSSC-CCCEEECTTCTTEEEECCSSS-EEEEEESCCCC
T ss_pred C---CCEEEeeCCCCccceeecCCCCc-eEEEEECCCCCCEEEEEecCC-cEEEEEccCCC
Confidence 2 24778998776532221101111 111222 244 6777777664 78899876643
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.98 E-value=0.27 Score=44.39 Aligned_cols=145 Identities=12% Similarity=0.091 Sum_probs=69.6
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcC----C
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRR----R 206 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~----r 206 (428)
..+.++|+.+++....-..+.. .-....++.. ++..+|+.+.. ...++++|..+.+-...-..+.+ .
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADA--GPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTC--TTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred CeEEEEECCCCcEEEEEEcCCC--CCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 3788899988764332122210 0012234443 34367776532 34799999988764432111110 0
Q ss_pred cceeeEEE-CC-EEEEEccccC-C-CCC--CCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCE-EEEEecCCCCcee
Q 014222 207 HFFGSCVI-NN-CLYVAGGENG-G-VHR--SLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGK-WFLKGLGSHRQVL 279 (428)
Q Consensus 207 ~~~~~~~~-~~-~iyv~GG~~~-~-~~~--~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~-lyv~Gg~~~~~~~ 279 (428)
.-..++.- ++ .+|+...... . ... ....+.+||..+.+....-+.... ....+..-+++ ||+.+ ..
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~------~~ 155 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ-ITMLAWARDGSKLYGLG------RD 155 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS-CCCEEECTTSSCEEEES------SS
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC-cceeEECCCCCEEEEeC------Ce
Confidence 11122332 34 6777642110 0 000 236899999988765432221111 11112222454 66652 13
Q ss_pred EEEEeCCCCCeE
Q 014222 280 SEAYQPETDSWF 291 (428)
Q Consensus 280 i~~yd~~~~~W~ 291 (428)
+..||+.+.+-.
T Consensus 156 i~~~d~~~~~~~ 167 (337)
T 1pby_B 156 LHVMDPEAGTLV 167 (337)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCcEe
Confidence 778898877543
No 140
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.98 E-value=0.41 Score=43.71 Aligned_cols=220 Identities=10% Similarity=0.048 Sum_probs=100.5
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCc----eeeCCCCC-----
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNK----WHRAPDML----- 203 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~----W~~~~~~~----- 203 (428)
.+.+||..+++....-.... .-.+++...++..++.++.+.. .....+.+||..+.. +......+
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 170 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWKSPV-----PVKRVEFSPCGNYFLAILDNVM-KNPGSINIYEIERDSATHELTKVSEEPIHKII 170 (369)
T ss_dssp EEEEEETTTCCEEEEEECSS-----CEEEEEECTTSSEEEEEECCBT-TBCCEEEEEEEEECTTTCCEEEECSSCSEEEE
T ss_pred eEEEEECCCCcEEEEeecCC-----CeEEEEEccCCCEEEEecCCcc-CCCCEEEEEEecCCccceeecccccceeeecc
Confidence 68888988776433222221 1223333333345555544311 122467777765543 11111100
Q ss_pred cCCc--ceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCC-ceE-EcCCCCCCccceEEEEE--CCEEEEEecCCC
Q 014222 204 RRRH--FFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKN-RWS-FISDMSTAMVPFIGVVY--EGKWFLKGLGSH 275 (428)
Q Consensus 204 ~~r~--~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~-~W~-~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~ 275 (428)
.... ......+ +++.++.|+.+ ..+.+||..+. .-. .+... . .......+ ++.+++.|+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~-~--~~v~~~~~~~~~~~l~~~~~d- 239 (369)
T 3zwl_B 171 THEGLDAATVAGWSTKGKYIIAGHKD-------GKISKYDVSNNYEYVDSIDLH-E--KSISDMQFSPDLTYFITSSRD- 239 (369)
T ss_dssp CCTTCCCEEEEEECGGGCEEEEEETT-------SEEEEEETTTTTEEEEEEECC-S--SCEEEEEECTTSSEEEEEETT-
T ss_pred CCcCccceeEEEEcCCCCEEEEEcCC-------CEEEEEECCCCcEeEEEEecC-C--CceeEEEECCCCCEEEEecCC-
Confidence 0000 1122222 45566666653 57899999873 322 22211 1 11122222 56656665432
Q ss_pred CceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCCc-------------EEEEEeCCCCceeeCcccccc
Q 014222 276 RQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDGC-------------KIRVYDEVTDSWSKHIDSKMH 342 (428)
Q Consensus 276 ~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~-------------~i~~yd~~~~~W~~v~~~~~~ 342 (428)
..+..||..+.+-...-. ...........-++...++++.++. .+..||..+.+=. ..+...
T Consensus 240 --~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--~~~~~~ 314 (369)
T 3zwl_B 240 --TNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI--GRVQGH 314 (369)
T ss_dssp --SEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE--EEEECC
T ss_pred --ceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch--hheecc
Confidence 246789988765433321 1111000111224555555554332 5788887765322 121111
Q ss_pred cCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 343 LGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.... .......++++++.|+.++. +.+||..+
T Consensus 315 ~~~v----~~~~~s~~~~~l~s~~~dg~--v~iw~~~~ 346 (369)
T 3zwl_B 315 FGPL----NTVAISPQGTSYASGGEDGF--IRLHHFEK 346 (369)
T ss_dssp SSCE----EEEEECTTSSEEEEEETTSE--EEEEEECH
T ss_pred cCcE----EEEEECCCCCEEEEEcCCCe--EEEEECcc
Confidence 1111 12233446788888876653 55666655
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.95 E-value=0.48 Score=46.89 Aligned_cols=247 Identities=11% Similarity=-0.001 Sum_probs=114.3
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEEC--CCC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSA--RTN 194 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~--~t~ 194 (428)
.+.+|+.+.. ...+.++|..+++-... ++.. ...|+++.. ++..+|+.+. + ..+.+||. .+.
T Consensus 148 ~~~~~vs~~~---d~~V~v~D~~t~~~~~~--i~~g---~~~~~v~~spdg~~l~v~~~-d------~~V~v~D~~~~t~ 212 (543)
T 1nir_A 148 PNLFSVTLRD---AGQIALVDGDSKKIVKV--IDTG---YAVHISRMSASGRYLLVIGR-D------ARIDMIDLWAKEP 212 (543)
T ss_dssp GGEEEEEEGG---GTEEEEEETTTCCEEEE--EECS---TTEEEEEECTTSCEEEEEET-T------SEEEEEETTSSSC
T ss_pred CCEEEEEEcC---CCeEEEEECCCceEEEE--EecC---cccceEEECCCCCEEEEECC-C------CeEEEEECcCCCC
Confidence 5677777632 23678899988764321 1211 113455444 4445666642 1 47999999 665
Q ss_pred ceeeCCCCCcCCcceeeEEE-----CC-EEEEEccccCCCCCCCCeEEEEeCCCCceEE-cCCC----------CCCccc
Q 014222 195 KWHRAPDMLRRRHFFGSCVI-----NN-CLYVAGGENGGVHRSLRSAEVYDPNKNRWSF-ISDM----------STAMVP 257 (428)
Q Consensus 195 ~W~~~~~~~~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~----------p~~~~~ 257 (428)
+- +..++....-..+++- ++ .+|+. .+. ...+.++|..+.+-.. ++.. +.++..
T Consensus 213 ~~--~~~i~~g~~p~~va~sp~~~~dg~~l~v~-~~~------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~ 283 (543)
T 1nir_A 213 TK--VAEIKIGIEARSVESSKFKGYEDRYTIAG-AYW------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA 283 (543)
T ss_dssp EE--EEEEECCSEEEEEEECCSTTCTTTEEEEE-EEE------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEE
T ss_pred cE--EEEEecCCCcceEEeCCCcCCCCCEEEEE-Ecc------CCeEEEEeccccccceeecccCcccCccccccCCceE
Confidence 43 2222222222233332 45 45554 432 1578889988764322 2210 111221
Q ss_pred eEEEEE-CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceE-EECCeEEEEEccCCcEEEEEeCCCCceee
Q 014222 258 FIGVVY-EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSA-SLNRHLYALDCKDGCKIRVYDEVTDSWSK 335 (428)
Q Consensus 258 ~~~~~~-~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~lyv~gG~~~~~i~~yd~~~~~W~~ 335 (428)
..+... ++.+|+.... ...+..+|..+.+-..+........-...+ .-+++.+++.+...+.|.++|.++.+-..
T Consensus 284 ~i~~s~~~~~~~vs~~~---~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 284 AIIASHEHPEFIVNVKE---TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp EEEECSSSSEEEEEETT---TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EEEECCCCCEEEEEECC---CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence 222222 4455554432 224677887664321111101111111122 22555434443334589999999886443
Q ss_pred CcccccccCCcccccceEEEEe-CCeEEEEeCCCeEEEEEeecCCCCCCCccccccceeccCC
Q 014222 336 HIDSKMHLGNSRALEAAALVPL-NGKLCIIRNNMSISLVDVSKSNGERGASAEHLWETISGKG 397 (428)
Q Consensus 336 v~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~v~~yd~~~~~~~~~~~~W~~~~~~~ 397 (428)
.-... ..+.. ..+...... ++.+|+.+... ...|.++|..++. .....|+.+..++
T Consensus 361 ~i~~g-~~ph~--g~g~~~~~p~~g~~~~s~~~~-d~~V~v~d~~~~~--~~~~~~~~v~~l~ 417 (543)
T 1nir_A 361 LVDVG-KTPHP--GRGANFVHPKYGPVWSTSHLG-DGSISLIGTDPKN--HPQYAWKKVAELQ 417 (543)
T ss_dssp EEECS-SSBCC--TTCEEEEETTTEEEEEEEBSS-SSEEEEEECCTTT--CTTTBTSEEEEEE
T ss_pred eeccC-CCCCC--CCCcccCCCCCccEEEeccCC-CceEEEEEeCCCC--CchhcCeEEEEEE
Confidence 22111 11111 012333333 47888876422 1235567665510 0013377765544
No 142
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.94 E-value=1.1 Score=41.90 Aligned_cols=148 Identities=7% Similarity=0.036 Sum_probs=75.4
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceee-----CCCCCcCCccee-eEEE-CC-EEEEEccccCCCCCCCCeEEEEeC
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHR-----APDMLRRRHFFG-SCVI-NN-CLYVAGGENGGVHRSLRSAEVYDP 240 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~-----~~~~~~~r~~~~-~~~~-~~-~iyv~GG~~~~~~~~~~~v~~yd~ 240 (428)
.+++.|+.+ ..+.+||..++.... +..+........ ++.. ++ .+++.|+.+ ..+.+||.
T Consensus 95 ~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-------g~i~iwd~ 161 (402)
T 2aq5_A 95 NVIASGSED------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-------NVILVWDV 161 (402)
T ss_dssp TEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-------SCEEEEET
T ss_pred CEEEEEeCC------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-------CEEEEEEC
Confidence 577777754 368899988775421 111111111111 2222 33 467777754 47899999
Q ss_pred CCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecC-CCCcCCCCCceE-EECCeEEEEE
Q 014222 241 NKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVY-DGMVAGWRNPSA-SLNRHLYALD 316 (428)
Q Consensus 241 ~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~-~~~~~~~~~~~~-~~~~~lyv~g 316 (428)
.+.+....-...........+.. ++.+++.|+.+ ..+..||+.+.+-...- ..........++ .-+++++++|
T Consensus 162 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 162 GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD---KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT---SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred CCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC---CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 88765432110111111222222 66666666532 24778999876543221 111111111122 2367777776
Q ss_pred c--cCCcEEEEEeCCCCc
Q 014222 317 C--KDGCKIRVYDEVTDS 332 (428)
Q Consensus 317 G--~~~~~i~~yd~~~~~ 332 (428)
. .....|.+||..+..
T Consensus 239 ~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 239 FSRMSERQVALWDTKHLE 256 (402)
T ss_dssp ECTTCCEEEEEEETTBCS
T ss_pred ccCCCCceEEEEcCcccc
Confidence 2 233589999987643
No 143
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.93 E-value=0.83 Score=40.52 Aligned_cols=141 Identities=15% Similarity=0.174 Sum_probs=69.3
Q ss_pred CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecC
Q 014222 215 NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVY 294 (428)
Q Consensus 215 ~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~ 294 (428)
++..++.|+.+ ..+..||..+.. ..+..............-++. ++.|+.. ..+..||..+.+-...-
T Consensus 154 ~~~~l~~~~~d-------~~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~~~-~~~~~~d---g~i~i~d~~~~~~~~~~ 221 (313)
T 3odt_A 154 SENKFLTASAD-------KTIKLWQNDKVI-KTFSGIHNDVVRHLAVVDDGH-FISCSND---GLIKLVDMHTGDVLRTY 221 (313)
T ss_dssp TTTEEEEEETT-------SCEEEEETTEEE-EEECSSCSSCEEEEEEEETTE-EEEEETT---SEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEECC-------CCEEEEecCceE-EEEeccCcccEEEEEEcCCCe-EEEccCC---CeEEEEECCchhhhhhh
Confidence 56666666653 468888843322 222221222222333344777 4555432 24778998766532211
Q ss_pred CCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEE
Q 014222 295 DGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISL 372 (428)
Q Consensus 295 ~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~ 372 (428)
. ........+.+ +++ ++.|+.+ ..|.+||..+.+....-.. ..... .......++++ +.|+.++ .
T Consensus 222 ~--~~~~~i~~~~~~~~~~-l~~~~~d-g~v~iwd~~~~~~~~~~~~--~~~~i----~~~~~~~~~~~-~~~~~dg--~ 288 (313)
T 3odt_A 222 E--GHESFVYCIKLLPNGD-IVSCGED-RTVRIWSKENGSLKQVITL--PAISI----WSVDCMSNGDI-IVGSSDN--L 288 (313)
T ss_dssp E--CCSSCEEEEEECTTSC-EEEEETT-SEEEEECTTTCCEEEEEEC--SSSCE----EEEEECTTSCE-EEEETTS--C
T ss_pred h--cCCceEEEEEEecCCC-EEEEecC-CEEEEEECCCCceeEEEec--cCceE----EEEEEccCCCE-EEEeCCC--c
Confidence 1 00111112222 444 4555555 4899999988764433221 11111 12333445664 4565543 4
Q ss_pred EEeecCCC
Q 014222 373 VDVSKSNG 380 (428)
Q Consensus 373 v~~yd~~~ 380 (428)
+.+||..+
T Consensus 289 i~iw~~~~ 296 (313)
T 3odt_A 289 VRIFSQEK 296 (313)
T ss_dssp EEEEESCG
T ss_pred EEEEeCCC
Confidence 67899888
No 144
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.93 E-value=0.15 Score=52.88 Aligned_cols=186 Identities=10% Similarity=0.052 Sum_probs=89.2
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEc
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFI 248 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~ 248 (428)
..+++|+.+ ..+.+||..+++....-.............-+++.+++|+.+ ..+.+||..+.+....
T Consensus 26 ~~la~~~~~------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 26 PWVLTTLYS------GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-------FRIRVFNYNTGEKVVD 92 (814)
T ss_dssp SEEEEEETT------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-------SEEEEEETTTCCEEEE
T ss_pred CEEEEEeCC------CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC-------CeEEEEECCCCcEEEE
Confidence 466666543 368899988775433211111111111222255666667653 5789999988765332
Q ss_pred CCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCC-CeEecCCCCcCCCCCceEEE---CCeEEEEEccCCcEEE
Q 014222 249 SDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETD-SWFPVYDGMVAGWRNPSASL---NRHLYALDCKDGCKIR 324 (428)
Q Consensus 249 ~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~~~---~~~lyv~gG~~~~~i~ 324 (428)
-.............-++...+.|+.+ ..+..||..++ .....- .........+.+ ++.++++++.++ .|.
T Consensus 93 ~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~~~~~dg-~v~ 166 (814)
T 3mkq_A 93 FEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQTF--EGHEHFVMCVAFNPKDPSTFASGCLDR-TVK 166 (814)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETT---SEEEEEEGGGTSEEEEEE--ECCSSCEEEEEEETTEEEEEEEEETTS-EEE
T ss_pred EecCCCCEEEEEEeCCCCEEEEEcCC---CEEEEEECCCCceEEEEE--cCCCCcEEEEEEEcCCCCEEEEEeCCC-eEE
Confidence 11111111111122255555555432 24678888665 222211 111111112222 466777777664 899
Q ss_pred EEeCCCCceeeCcccccccCCcccccceEEEEe--CCeEEEEeCCCeEEEEEeecCCC
Q 014222 325 VYDEVTDSWSKHIDSKMHLGNSRALEAAALVPL--NGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 325 ~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+||..+..-.......... . ........ ++.++++|+.++ .+.+||..+
T Consensus 167 vwd~~~~~~~~~~~~~~~~--~---v~~~~~~~~~~~~~l~~~~~dg--~i~~~d~~~ 217 (814)
T 3mkq_A 167 VWSLGQSTPNFTLTTGQER--G---VNYVDYYPLPDKPYMITASDDL--TIKIWDYQT 217 (814)
T ss_dssp EEETTCSSCSEEEECCCTT--C---CCEEEECCSTTCCEEEEECTTS--EEEEEETTT
T ss_pred EEECCCCcceeEEecCCCC--C---EEEEEEEECCCCCEEEEEeCCC--EEEEEECCC
Confidence 9998765422211111000 0 11222233 667777777654 356677655
No 145
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.92 E-value=1.2 Score=44.63 Aligned_cols=119 Identities=14% Similarity=0.141 Sum_probs=67.0
Q ss_pred cceEEEEeeCCCCceeEEEEeC-CCCc--eEeCCCCCCCCc-----cccccEEEE--EeCCE----EEEEeeeCCCCCCC
Q 014222 118 EEWIYVIKRDREGKISWHAFDP-IYQL--WQPLPPIPKEYS-----EALGFGCAV--LSGCH----LYLFGGKDPLKGSM 183 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~-~~~~--W~~l~~~~~~~~-----~r~~~~~~~--~~~~~----lyv~GG~~~~~~~~ 183 (428)
++.||+.... ...++++|. .+++ |+.-........ .....+.++ .++ + ||+... .
T Consensus 62 ~g~vyv~~~~---~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g-~~~~rV~v~t~-------d 130 (599)
T 1w6s_A 62 DGKMYIHTSF---PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDG-KTPALILKTQL-------D 130 (599)
T ss_dssp TTEEEEECST---TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCS-SSCCEEEEECT-------T
T ss_pred CCEEEEEeCC---CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCC-cceeEEEEEcC-------C
Confidence 7788887631 236899999 7775 876543321100 011223455 444 6 777521 2
Q ss_pred ceEEEEECCCCc--eeeC-CCCCcC-CcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCC--ceEEcC
Q 014222 184 RRVIFYSARTNK--WHRA-PDMLRR-RHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWSFIS 249 (428)
Q Consensus 184 ~~v~~yd~~t~~--W~~~-~~~~~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~ 249 (428)
..++.+|..|.+ |+.- ...... ....+.++.+++||+..+..+ ......+..||..|. .|+.-.
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e--~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 131 GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAE--LGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGG--GTCCCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccc--cCCCCeEEEEECCCCcEEEEEcC
Confidence 378999998885 8753 221110 122234567899887543211 112368999999876 487543
No 146
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.92 E-value=0.85 Score=40.48 Aligned_cols=214 Identities=13% Similarity=0.034 Sum_probs=94.8
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCc-eeeCCCCCcCCcceee
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNK-WHRAPDMLRRRHFFGS 211 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~r~~~~~ 211 (428)
.+.+||..+++-...-.... ..-.+++...++..++.|+.++ .+.+|+..... ...+..+.........
T Consensus 40 ~v~vw~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg------~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 109 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYTGQ----GFLNSVCYDSEKELLLFGGKDT------MINGVPLFATSGEDPLYTLIGHQGNVCS 109 (313)
T ss_dssp EEEEEEESSSEEEEEEEECS----SCEEEEEEETTTTEEEEEETTS------CEEEEETTCCTTSCC-CEECCCSSCEEE
T ss_pred cEEEEECCCCEEEEEeecCC----ccEEEEEECCCCCEEEEecCCC------eEEEEEeeecCCCCcccchhhcccCEEE
Confidence 67778876654332211111 1223344443435777776543 46677765432 1222222222222223
Q ss_pred EEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE-CCEEEEEecCCCCceeEEEEeCCCCCe
Q 014222 212 CVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY-EGKWFLKGLGSHRQVLSEAYQPETDSW 290 (428)
Q Consensus 212 ~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~g~lyv~Gg~~~~~~~i~~yd~~~~~W 290 (428)
...++..++.|+.+ ..+.+||.......... ..... ......- ++..++.|+... .+..||..+..-
T Consensus 110 ~~~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~-~~~~v-~~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~ 177 (313)
T 3odt_A 110 LSFQDGVVISGSWD-------KTAKVWKEGSLVYNLQA-HNASV-WDAKVVSFSENKFLTASADK---TIKLWQNDKVIK 177 (313)
T ss_dssp EEEETTEEEEEETT-------SEEEEEETTEEEEEEEC-CSSCE-EEEEEEETTTTEEEEEETTS---CEEEEETTEEEE
T ss_pred EEecCCEEEEEeCC-------CCEEEEcCCcEEEeccc-CCCce-eEEEEccCCCCEEEEEECCC---CEEEEecCceEE
Confidence 33356666666653 57888883332222211 11111 1112222 566666655432 356787332221
Q ss_pred EecCCCCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeE
Q 014222 291 FPVYDGMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSI 370 (428)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~ 370 (428)
. ...............-++. ++.|+.+ ..|.+||..+.+-. ..+....... .......+++ ++.|+.++
T Consensus 178 ~-~~~~~~~~i~~~~~~~~~~-~~~~~~d-g~i~i~d~~~~~~~--~~~~~~~~~i----~~~~~~~~~~-l~~~~~dg- 246 (313)
T 3odt_A 178 T-FSGIHNDVVRHLAVVDDGH-FISCSND-GLIKLVDMHTGDVL--RTYEGHESFV----YCIKLLPNGD-IVSCGEDR- 246 (313)
T ss_dssp E-ECSSCSSCEEEEEEEETTE-EEEEETT-SEEEEEETTTCCEE--EEEECCSSCE----EEEEECTTSC-EEEEETTS-
T ss_pred E-EeccCcccEEEEEEcCCCe-EEEccCC-CeEEEEECCchhhh--hhhhcCCceE----EEEEEecCCC-EEEEecCC-
Confidence 1 1110111111111234666 5666655 48999998865422 2221111111 1222233454 45555443
Q ss_pred EEEEeecCCC
Q 014222 371 SLVDVSKSNG 380 (428)
Q Consensus 371 ~~v~~yd~~~ 380 (428)
.+.+||..+
T Consensus 247 -~v~iwd~~~ 255 (313)
T 3odt_A 247 -TVRIWSKEN 255 (313)
T ss_dssp -EEEEECTTT
T ss_pred -EEEEEECCC
Confidence 367888877
No 147
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.91 E-value=1.7 Score=45.00 Aligned_cols=216 Identities=7% Similarity=-0.009 Sum_probs=111.1
Q ss_pred eEEEEeCCCCceEeCCCC---CCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcC-Cc-
Q 014222 133 SWHAFDPIYQLWQPLPPI---PKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRR-RH- 207 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~---~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~-r~- 207 (428)
-+.+||.. +|+..... +.......-.+++...++.|++. .. ..+.+||+.+++.......... ..
T Consensus 63 GL~ryDG~--~f~~~~~~~~~~~~l~~n~I~~i~~d~~g~lWig-T~-------~Gl~~yd~~~~~f~~~~~~~~~~~~~ 132 (795)
T 4a2l_A 63 GVNKYDGY--AFTVYQHNEDDPNSIANDISRIVKTDSQGRVWIG-TR-------DGLSRYDEEKDIFQNFFYEKNGKHLQ 132 (795)
T ss_dssp EEEEECSS--CEEEECCCTTCTTSCSCSCEEEEEECTTSCEEEE-ES-------SCEEEEETTTTEEEEECCEETTEECC
T ss_pred cCcccCCC--ceEEEeCCCCCCCcccccceeEEEECCCCCEEEE-eC-------CchheeCCCCCeEEeccccccCCCce
Confidence 46788875 35444321 11111111223333333367764 22 2488999999988765432111 00
Q ss_pred ceee-EEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCC-CCCc-cceEEEEECCEEEEEecCCCCceeEEEEe
Q 014222 208 FFGS-CVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDM-STAM-VPFIGVVYEGKWFLKGLGSHRQVLSEAYQ 284 (428)
Q Consensus 208 ~~~~-~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~-p~~~-~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd 284 (428)
-..+ ..-++.|++... ..+.+||+.++++..+... +... .......-+|.||+.... ..+.+||
T Consensus 133 i~~i~~d~~g~lwi~t~---------~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~----~Gl~~~~ 199 (795)
T 4a2l_A 133 VNGIEEISPEQLLISTP---------EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYIGTST----DGLYTYS 199 (795)
T ss_dssp CCEEEEEETTEEEEEET---------TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEEEESS----SCEEEEE
T ss_pred EEEEEECCCCCEEEEEC---------CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEEEECC----CCEEEEe
Confidence 1122 223678887432 3688999999888765431 1111 111222348899984311 1368999
Q ss_pred CCCCCeEecCCCCcCCCCCceE-EECCeEEEEEccCCcEEEEEeCCCCceeeCcccc---cccCCcccccceEEEE-eCC
Q 014222 285 PETDSWFPVYDGMVAGWRNPSA-SLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSK---MHLGNSRALEAAALVP-LNG 359 (428)
Q Consensus 285 ~~~~~W~~~~~~~~~~~~~~~~-~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~---~~~~~~~~~~~~~~~~-~~~ 359 (428)
+.+++++.+...+........+ .-++.|++.... ..++.||++++++......+ ...... .-.++.. -+|
T Consensus 200 ~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~--~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~---~i~~i~~d~~g 274 (795)
T 4a2l_A 200 ITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEG--AGLFLINPKTKEIKNYLHSPSNPKSISSN---YIRSLAMDSQN 274 (795)
T ss_dssp TTTCCEEECC----CCCEEEEEEEETTEEEEEEBS--SCEEEEETTTTEEEEECCCTTCTTSCSCS---BEEEEEECTTS
T ss_pred CCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECC--CCeEEEeCCCCeEEEeecCCCCccccCCC---eEEEEEEcCCC
Confidence 9999998764322111111111 246788875422 35999999998887764321 111111 1122333 356
Q ss_pred eEEEEeCCCeEEEEEeecCCC
Q 014222 360 KLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 360 ~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.|+|-.. .+ +..||+.+
T Consensus 275 ~lWigt~-~G---l~~~~~~~ 291 (795)
T 4a2l_A 275 RLWIGTF-ND---LNIYHEGT 291 (795)
T ss_dssp CEEEEES-SC---EEEEETTT
T ss_pred CEEEEeC-Ch---hheEcCCC
Confidence 7777432 22 56777777
No 148
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.90 E-value=0.38 Score=43.89 Aligned_cols=185 Identities=6% Similarity=-0.060 Sum_probs=87.8
Q ss_pred eEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeC
Q 014222 120 WIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRA 199 (428)
Q Consensus 120 ~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 199 (428)
.+++.|+.. ..+.+||..+........+... ...-.+++...++..++.|+.+ ..+.+||..+.+...+
T Consensus 55 ~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 55 NFLIAGSWA---NDVRCWEVQDSGQTIPKAQQMH--TGPVLDVCWSDDGSKVFTASCD------KTAKMWDLSSNQAIQI 123 (368)
T ss_dssp EEEEEEETT---SEEEEEEECTTSCEEEEEEEEC--SSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEE
T ss_pred eEEEEECCC---CcEEEEEcCCCCceeEEEeccc--cCCEEEEEECcCCCEEEEEcCC------CcEEEEEcCCCCceee
Confidence 455555322 2577777776322211111110 0112233333333566666644 3688999988875543
Q ss_pred CCCCcCCcceeeEE---ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCC
Q 014222 200 PDMLRRRHFFGSCV---INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHR 276 (428)
Q Consensus 200 ~~~~~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~ 276 (428)
.... ..-..+.. -++.+++.|+.+ ..+.+||..+.+-...-.. ...........+.+++.+..
T Consensus 124 ~~~~--~~v~~~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--- 189 (368)
T 3mmy_A 124 AQHD--APVKTIHWIKAPNYSCVMTGSWD-------KTLKFWDTRSSNPMMVLQL--PERCYCADVIYPMAVVATAE--- 189 (368)
T ss_dssp EECS--SCEEEEEEEECSSCEEEEEEETT-------SEEEEECSSCSSCSEEEEC--SSCEEEEEEETTEEEEEEGG---
T ss_pred cccc--CceEEEEEEeCCCCCEEEEccCC-------CcEEEEECCCCcEEEEEec--CCCceEEEecCCeeEEEeCC---
Confidence 2211 11112222 256777777764 5789999887642211111 11223334445555554432
Q ss_pred ceeEEEEeCCCCC--eEecCCCCcCCCCCceEEECC----eEEEEEccCCcEEEEEeCCCC
Q 014222 277 QVLSEAYQPETDS--WFPVYDGMVAGWRNPSASLNR----HLYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 277 ~~~i~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~----~lyv~gG~~~~~i~~yd~~~~ 331 (428)
..+..||..... +..+...............+. ..++.|+.+ ..+.+||....
T Consensus 190 -~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-g~i~i~~~~~~ 248 (368)
T 3mmy_A 190 -RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE-GRVAIHYINPP 248 (368)
T ss_dssp -GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT-SEEEEEESSCS
T ss_pred -CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCC-CcEEEEecCCC
Confidence 235677776543 443332111111111122222 235666555 48889998776
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.89 E-value=0.61 Score=47.44 Aligned_cols=184 Identities=11% Similarity=0.027 Sum_probs=95.1
Q ss_pred CceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCC-ceEEcCCCCCCc----
Q 014222 183 MRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKN-RWSFISDMSTAM---- 255 (428)
Q Consensus 183 ~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~-~W~~~~~~p~~~---- 255 (428)
...++++|..+++-..+............+.. +++..+++..+. ......+..+|+.+. ....+.......
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNR--AQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECT--TSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCC--CCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 45799999998876655432111122222222 555444444321 122347889999988 665543211110
Q ss_pred cceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCce-EEE--C-CeEEEEEccCC---cEEEEE
Q 014222 256 VPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPS-ASL--N-RHLYALDCKDG---CKIRVY 326 (428)
Q Consensus 256 ~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~--~-~~lyv~gG~~~---~~i~~y 326 (428)
.......- +|++++.+.. .....++.+|........+.... ..... +.+ + +.||+.+..++ ..|+.+
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~-~g~~~l~~~~~~~~~~~~l~~~~---~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRR-DGWNHLYLYDTTGRLIRQVTKGE---WEVTNFAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp CSCCEECTTCSSEEEEEECT-TSSCEEEEEETTSCEEEECCCSS---SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred cCCceeecCCCCEEEEEEcc-CCccEEEEEECCCCEEEecCCCC---eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 01112233 7785555433 23455788887777676664321 11111 222 3 45666665443 479999
Q ss_pred eCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeC--CCeEEEEEeecCCC
Q 014222 327 DEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRN--NMSISLVDVSKSNG 380 (428)
Q Consensus 327 d~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG--~~~~~~v~~yd~~~ 380 (428)
|.++...+.+.... . ........+++.+++.. ......++++|..+
T Consensus 388 d~~~~~~~~l~~~~----~----~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 388 DIKGGKTKDLTPES----G----MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp ETTCCCCEESCCSS----S----EEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred EcCCCCceeccCCC----c----eEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 99887766654211 1 11233444565555442 22334578888776
No 150
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.87 E-value=1.6 Score=44.41 Aligned_cols=117 Identities=21% Similarity=0.286 Sum_probs=68.4
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCc--eEeCCCCCCCCc-----cccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEE
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQL--WQPLPPIPKEYS-----EALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYS 190 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~--W~~l~~~~~~~~-----~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd 190 (428)
++.||+... ...++++|..+++ |+.-...+.... .....+.++.++ +||+... ...++.+|
T Consensus 77 ~g~vyv~~~----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~v~v~~~-------dg~l~alD 144 (677)
T 1kb0_A 77 DGIMYVSAS----WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKG-KVYVGAW-------DGRLIALD 144 (677)
T ss_dssp TTEEEEECG----GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETT-EEEEECT-------TSEEEEEE
T ss_pred CCEEEEECC----CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECC-EEEEEcC-------CCEEEEEE
Confidence 778888764 2368899998876 876543221100 011224455555 7887632 24789999
Q ss_pred CCCCc--eeeCCC--CCc-CCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCC--ceEEc
Q 014222 191 ARTNK--WHRAPD--MLR-RRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWSFI 248 (428)
Q Consensus 191 ~~t~~--W~~~~~--~~~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~ 248 (428)
..|++ |+.-.. ... .....+.++.++++|+..+..+ ......+..||..|. .|+.-
T Consensus 145 ~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~--~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 145 AATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAE--YGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTT--TCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccc--cCCCCEEEEEECCCCcEEEEec
Confidence 98875 875322 110 1122345567899988654321 112367999999876 48764
No 151
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.87 E-value=0.96 Score=40.73 Aligned_cols=189 Identities=11% Similarity=-0.073 Sum_probs=97.1
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
++.||+... ....++.||+..+. ......+. .-+++++..++++|+..... ....+++||+.+++.+
T Consensus 42 ~g~lyv~d~---~~~~I~~~d~~g~~-~~~~~~~~-----~p~gia~~~dG~l~vad~~~----~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 42 DGTIFVTNH---EVGEIVSITPDGNQ-QIHATVEG-----KVSGLAFTSNGDLVATGWNA----DSIPVVSLVKSDGTVE 108 (306)
T ss_dssp TSCEEEEET---TTTEEEEECTTCCE-EEEEECSS-----EEEEEEECTTSCEEEEEECT----TSCEEEEEECTTSCEE
T ss_pred CCCEEEEeC---CCCeEEEECCCCce-EEEEeCCC-----CceeEEEcCCCcEEEEeccC----CcceEEEEcCCCCeEE
Confidence 455777752 22368899987643 22211221 23455555444788875321 1235889998888877
Q ss_pred eCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCc---eEEcCC----CC-CC-ccceEEEEECCEE
Q 014222 198 RAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNR---WSFISD----MS-TA-MVPFIGVVYEGKW 267 (428)
Q Consensus 198 ~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~---W~~~~~----~p-~~-~~~~~~~~~~g~l 267 (428)
.+...+..+...+.+. .++.+|+.-.. ...++++|+.+.+ |..-+. .+ .. ........-++.|
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~-------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~l 181 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSY-------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFL 181 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETT-------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEE
T ss_pred EEEeCCCccccCcccccCCCcEEEEECC-------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEE
Confidence 6554443333333333 34567775321 2588999987642 211110 11 11 1112232335589
Q ss_pred EEEecCCCCceeEEEEeCCC-CCeEecCCCCcCCCCCceEE-ECCeEEEEEccCCcEEEEEeCCC
Q 014222 268 FLKGLGSHRQVLSEAYQPET-DSWFPVYDGMVAGWRNPSAS-LNRHLYALDCKDGCKIRVYDEVT 330 (428)
Q Consensus 268 yv~Gg~~~~~~~i~~yd~~~-~~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~i~~yd~~~ 330 (428)
|+.-.. ...+.+||+.. .+............-...++ -+|+||+..... +.|.+||++.
T Consensus 182 yv~d~~---~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~-~~V~~~~~~G 242 (306)
T 2p4o_A 182 YVSNTE---KMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIY-NSVVRIAPDR 242 (306)
T ss_dssp EEEETT---TTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTT-CCEEEECTTC
T ss_pred EEEeCC---CCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCC-CeEEEECCCC
Confidence 987432 33578898765 22211110000011112332 368898886433 5799999873
No 152
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.86 E-value=0.85 Score=40.03 Aligned_cols=216 Identities=10% Similarity=-0.031 Sum_probs=113.5
Q ss_pred eEEEEeCCCCceEeCCC---CCCCCccccccEEEEEe-CCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcc
Q 014222 133 SWHAFDPIYQLWQPLPP---IPKEYSEALGFGCAVLS-GCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHF 208 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~---~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~ 208 (428)
.+..+|........+.. +..+ ...-+++++.. ++.||+... ....+.+||+.+..-..+..... ..-
T Consensus 11 ~I~~~~~~g~~~~~~~~~~~~~~~--~~~~~gi~~d~~~~~ly~~d~------~~~~I~~~~~~g~~~~~~~~~~~-~~p 81 (267)
T 1npe_A 11 KIERLPLERNTMKKTEAKAFLHIP--AKVIIGLAFDCVDKVVYWTDI------SEPSIGRASLHGGEPTTIIRQDL-GSP 81 (267)
T ss_dssp EEEEEEESSSCBCGGGCEEEEEEE--EEEEEEEEEETTTTEEEEEET------TTTEEEEEESSSCCCEEEECTTC-CCE
T ss_pred eEEEEEecCcccccccceeeecCC--CCcEEEEEEecCCCEEEEEEC------CCCEEEEEecCCCCcEEEEECCC-CCc
Confidence 67778776554322111 1111 11234555542 348998843 23579999987764332211110 122
Q ss_pred eeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEe
Q 014222 209 FGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQ 284 (428)
Q Consensus 209 ~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd 284 (428)
.++++. ++.||+.-.. ...+.++|+....-+.+...... ....+++- ++.||+..... ....+++++
T Consensus 82 ~~ia~d~~~~~lyv~d~~-------~~~I~~~~~~g~~~~~~~~~~~~-~P~~i~vd~~~g~lyv~~~~~-~~~~I~~~~ 152 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQ-------LDRIEVAKMDGTQRRVLFDTGLV-NPRGIVTDPVRGNLYWTDWNR-DNPKIETSH 152 (267)
T ss_dssp EEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCS-SEEEEEEETTTTEEEEEECCS-SSCEEEEEE
T ss_pred cEEEEEecCCeEEEEECC-------CCEEEEEEcCCCCEEEEEECCCC-CccEEEEeeCCCEEEEEECCC-CCcEEEEEe
Confidence 334443 5799997543 25889999876543333211111 11233333 68999985321 123577888
Q ss_pred CCCCCeEecCCCCcCCCCCc--eEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCe
Q 014222 285 PETDSWFPVYDGMVAGWRNP--SASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGK 360 (428)
Q Consensus 285 ~~~~~W~~~~~~~~~~~~~~--~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~ 360 (428)
+....-+.+.. .....+ .++- +++||+..... +.|+++|++...-..+.. ....+ .++...++.
T Consensus 153 ~dg~~~~~~~~---~~~~~P~gia~d~~~~~lyv~d~~~-~~I~~~~~~g~~~~~~~~---~~~~P-----~gi~~d~~~ 220 (267)
T 1npe_A 153 MDGTNRRILAQ---DNLGLPNGLTFDAFSSQLCWVDAGT-HRAECLNPAQPGRRKVLE---GLQYP-----FAVTSYGKN 220 (267)
T ss_dssp TTSCCCEEEEC---TTCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTEEEEEEEEE---CCCSE-----EEEEEETTE
T ss_pred cCCCCcEEEEE---CCCCCCcEEEEcCCCCEEEEEECCC-CEEEEEecCCCceEEEec---CCCCc-----eEEEEeCCE
Confidence 76543333321 111122 2332 57899987544 589999998653222211 11112 345556899
Q ss_pred EEEEeCCCeEEEEEeecCCC
Q 014222 361 LCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 361 lyv~GG~~~~~~v~~yd~~~ 380 (428)
||+..... ..|.++|+.+
T Consensus 221 lyva~~~~--~~v~~~d~~~ 238 (267)
T 1npe_A 221 LYYTDWKT--NSVIAMDLAI 238 (267)
T ss_dssp EEEEETTT--TEEEEEETTT
T ss_pred EEEEECCC--CeEEEEeCCC
Confidence 99976432 2478899876
No 153
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.84 E-value=0.83 Score=41.17 Aligned_cols=151 Identities=13% Similarity=0.058 Sum_probs=72.6
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCC
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPN 241 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 241 (428)
++...++..++.|+.++ .+.+++........................++..++.|+.+ ..+..||..
T Consensus 92 ~~~s~dg~~l~s~~~d~------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-------~~~~~~d~~ 158 (340)
T 4aow_A 92 VVISSDGQFALSGSWDG------TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-------KTIKLWNTL 158 (340)
T ss_dssp EEECTTSSEEEEEETTS------EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-------SCEEEECTT
T ss_pred EEECCCCCEEEEEcccc------cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC-------CeEEEEEeC
Confidence 33333335666776542 57777877665443322221111111222244555666653 466778876
Q ss_pred CCceEEcCCCCCCccceEEEEE----CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEE
Q 014222 242 KNRWSFISDMSTAMVPFIGVVY----EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRHLYAL 315 (428)
Q Consensus 242 t~~W~~~~~~p~~~~~~~~~~~----~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~ 315 (428)
...-......... .......+ .+.+++.|+.. ..+..||..+.+-...-..... ...++.+ ++++++.
T Consensus 159 ~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~s~~~d---~~i~i~d~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s 232 (340)
T 4aow_A 159 GVCKYTVQDESHS-EWVSCVRFSPNSSNPIIVSCGWD---KLVKVWNLANCKLKTNHIGHTG--YLNTVTVSPDGSLCAS 232 (340)
T ss_dssp SCEEEEECSSSCS-SCEEEEEECSCSSSCEEEEEETT---SCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEE
T ss_pred CCceEEEEecccc-CcccceEEccCCCCcEEEEEcCC---CEEEEEECCCCceeeEecCCCC--cEEEEEECCCCCEEEE
Confidence 5543222221111 11112222 23344555432 2367888877654332110110 1112222 6778888
Q ss_pred EccCCcEEEEEeCCCCc
Q 014222 316 DCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 316 gG~~~~~i~~yd~~~~~ 332 (428)
|+.++ .|.+||..+..
T Consensus 233 ~s~Dg-~i~iwd~~~~~ 248 (340)
T 4aow_A 233 GGKDG-QAMLWDLNEGK 248 (340)
T ss_dssp EETTC-EEEEEETTTTE
T ss_pred EeCCC-eEEEEEeccCc
Confidence 87765 89999988654
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.83 E-value=0.49 Score=43.88 Aligned_cols=205 Identities=10% Similarity=-0.072 Sum_probs=102.0
Q ss_pred EEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEE-EEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCC
Q 014222 122 YVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGC-AVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAP 200 (428)
Q Consensus 122 ~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~-~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 200 (428)
+++....++...++.+|+.+++-..+...+.. ...+. ..-++..|+... . ...++++|..+++-+.+.
T Consensus 50 l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~----~~~~~~~spdg~~l~~~~-~------~~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 50 LLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD----NTFGGFLSPDDDALFYVK-D------GRNLMRVDLATLEENVVY 118 (388)
T ss_dssp EEEEECTTSSCEEEEEETTTCEEEECCCSSCB----CSSSCEECTTSSEEEEEE-T------TTEEEEEETTTCCEEEEE
T ss_pred EEEEEcCCCCceEEEEeCCCCceEEeeeCCCC----CccceEEcCCCCEEEEEe-C------CCeEEEEECCCCcceeee
Confidence 34443434556799999999988887654332 11122 223453444443 2 137899999988766554
Q ss_pred CCCcCCcceeeEE--ECCEEEEEccccCC---------------CCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE
Q 014222 201 DMLRRRHFFGSCV--INNCLYVAGGENGG---------------VHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY 263 (428)
Q Consensus 201 ~~~~~r~~~~~~~--~~~~iyv~GG~~~~---------------~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~ 263 (428)
..+.......... -+++.++.-..... .......+..+|+.+.+-..+...+. ........-
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp 197 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ-WLGHPIYRP 197 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-CEEEEEEET
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-cccccEECC
Confidence 4433222111111 23433331100000 01123578999999887655542221 112222233
Q ss_pred -CCEEEEEecC---CCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCe-EEEEEccCC---cEEEEEeCCCCce
Q 014222 264 -EGKWFLKGLG---SHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRH-LYALDCKDG---CKIRVYDEVTDSW 333 (428)
Q Consensus 264 -~g~lyv~Gg~---~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~-lyv~gG~~~---~~i~~yd~~~~~W 333 (428)
+|+..++... ......++.+|........+..... ......... +|+ |+.+....+ ..|++||+++.+-
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAE-GESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCT-TEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCC-CcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 4554333221 1123458899988777666654221 101111222 454 544443222 2499999999887
Q ss_pred eeCccc
Q 014222 334 SKHIDS 339 (428)
Q Consensus 334 ~~v~~~ 339 (428)
+.+...
T Consensus 277 ~~l~~~ 282 (388)
T 3pe7_A 277 RQLTSM 282 (388)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 666543
No 155
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.77 E-value=0.21 Score=45.37 Aligned_cols=189 Identities=10% Similarity=0.048 Sum_probs=90.3
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE----CCEEEEEccccCCCCCCCCeEEEEeCCCCc
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI----NNCLYVAGGENGGVHRSLRSAEVYDPNKNR 244 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~ 244 (428)
+.++.|+.+ ..+.+||..++....+..+.........+.+ ++.+++.|+.+ ..+.+||..+..
T Consensus 26 ~~lasgs~D------~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-------~~v~iWd~~~~~ 92 (316)
T 3bg1_A 26 TRLATCSSD------RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-------RKVIIWREENGT 92 (316)
T ss_dssp CEEEEEETT------TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-------SCEEEECCSSSC
T ss_pred CEEEEEeCC------CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-------CEEEEEECCCCc
Confidence 567777654 2677888776654322222211111112222 25677777764 578999998877
Q ss_pred eEEcCCCCCCccceEEEEE--C--CEEEEEecCCCCceeEEEEeCCCC-CeEecCCCCcCCCCCceEEE-----------
Q 014222 245 WSFISDMSTAMVPFIGVVY--E--GKWFLKGLGSHRQVLSEAYQPETD-SWFPVYDGMVAGWRNPSASL----------- 308 (428)
Q Consensus 245 W~~~~~~p~~~~~~~~~~~--~--g~lyv~Gg~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~~~----------- 308 (428)
|..+..+.........+.. + +.+.+.|+.+. .+..||..+. .|...............+..
T Consensus 93 ~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~---~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG---AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLID 169 (316)
T ss_dssp CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS---CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-----
T ss_pred ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC---CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccc
Confidence 7544322211111112222 2 55566665432 3567777654 56533221110000011111
Q ss_pred --------CCeEEEEEccCCcEEEEEeCCC-CceeeCcccccccCCcccccceEEEEeC----CeEEEEeCCCeEEEEEe
Q 014222 309 --------NRHLYALDCKDGCKIRVYDEVT-DSWSKHIDSKMHLGNSRALEAAALVPLN----GKLCIIRNNMSISLVDV 375 (428)
Q Consensus 309 --------~~~lyv~gG~~~~~i~~yd~~~-~~W~~v~~~~~~~~~~~~~~~~~~~~~~----~~lyv~GG~~~~~~v~~ 375 (428)
.+++++.|+.++ .|.+||..+ +.|..+..+....... .......+ +++++.|+.++. +.+
T Consensus 170 ~~~~~~~~~~~~l~sgs~D~-~v~lWd~~~~~~~~~~~~l~~h~~~V----~~v~~sp~~~~~~~~las~s~D~~--v~i 242 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGGCDN-LIKLWKEEEDGQWKEEQKLEAHSDWV----RDVAWAPSIGLPTSTIASCSQDGR--VFI 242 (316)
T ss_dssp -CCSCCCCCCCBEECCBTTS-BCCEEEECTTSCEEEEECCBCCSSCE----EEEECCCCSSCSCCEEEEEETTCE--EEE
T ss_pred cccccCccccceEEEecCCC-eEEEEEeCCCCccceeeecccCCCce----EEEEecCCCCCCCceEEEEcCCCe--EEE
Confidence 135666666554 678888763 4576655443222111 11111222 267777776654 445
Q ss_pred ecCCC
Q 014222 376 SKSNG 380 (428)
Q Consensus 376 yd~~~ 380 (428)
||..+
T Consensus 243 w~~~~ 247 (316)
T 3bg1_A 243 WTCDD 247 (316)
T ss_dssp EECSS
T ss_pred EEccC
Confidence 65543
No 156
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.72 E-value=1.2 Score=40.66 Aligned_cols=153 Identities=9% Similarity=0.026 Sum_probs=78.1
Q ss_pred CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEE-EECCEEEEEecCCCCceeEEEEeCCCCCeE--
Q 014222 215 NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGV-VYEGKWFLKGLGSHRQVLSEAYQPETDSWF-- 291 (428)
Q Consensus 215 ~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~-- 291 (428)
++..++.|+.+ ..+.+||..+.+-..+...........++ .-++.+++.|+.+. .+..||..+.+-.
T Consensus 138 ~~~~l~s~s~d-------g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg---~i~iwd~~~~~~~~~ 207 (343)
T 3lrv_A 138 NTEYFIWADNR-------GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG---ILDVYNLSSPDQASS 207 (343)
T ss_dssp -CCEEEEEETT-------CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS---CEEEEESSCTTSCCE
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC---EEEEEECCCCCCCcc
Confidence 45667777754 57899999887654332222211112222 23677777776432 4678999877532
Q ss_pred ecCCCCcCCCCCc--eEEE--CCeEEEEEccCCcEEEEEeCCCCcee-eCcccccccCCcccccceEEEEeCCeEEEEeC
Q 014222 292 PVYDGMVAGWRNP--SASL--NRHLYALDCKDGCKIRVYDEVTDSWS-KHIDSKMHLGNSRALEAAALVPLNGKLCIIRN 366 (428)
Q Consensus 292 ~~~~~~~~~~~~~--~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~-~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG 366 (428)
.+.. ..... .+.+ ++...+.++ ++ .|.+||..+..-. .+.......... .........+++.++.|+
T Consensus 208 ~~~~----~h~~~v~~l~fs~~g~~l~s~~-~~-~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 208 RFPV----DEEAKIKEVKFADNGYWMVVEC-DQ-TVVCFDLRKDVGTLAYPTYTIPEFKT--GTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp ECCC----CTTSCEEEEEECTTSSEEEEEE-SS-BEEEEETTSSTTCBSSCCCBC-------CCEEEEECTTSSEEEEEE
T ss_pred EEec----cCCCCEEEEEEeCCCCEEEEEe-CC-eEEEEEcCCCCcceeecccccccccc--cceEEEECCCCCEEEEec
Confidence 2211 01111 2223 566677776 44 8999998875421 111110000000 000233344566666654
Q ss_pred C-CeEEEEEeecCCCCCCCccccccce
Q 014222 367 N-MSISLVDVSKSNGERGASAEHLWET 392 (428)
Q Consensus 367 ~-~~~~~v~~yd~~~~~~~~~~~~W~~ 392 (428)
. +....++-|+... ..|+.
T Consensus 280 ~~d~~i~v~~~~~~~-------~~~~~ 299 (343)
T 3lrv_A 280 NESNSLTIYKFDKKT-------KNWTK 299 (343)
T ss_dssp TTTTEEEEEEECTTT-------CSEEE
T ss_pred CCCCcEEEEEEcccc-------cceEe
Confidence 4 5545555565566 77886
No 157
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.70 E-value=0.96 Score=41.87 Aligned_cols=100 Identities=9% Similarity=0.128 Sum_probs=50.0
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE----CCEEEEEccccCCCCCCCCeEEEEeCCCCc
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI----NNCLYVAGGENGGVHRSLRSAEVYDPNKNR 244 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~ 244 (428)
.+++.|+.+ ..+.+||..+.+-...-....... ..... ++.+++.|+.+ ..+.+||..+.+
T Consensus 113 ~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~v~~~d~~~~~ 177 (408)
T 4a11_B 113 GMFTSSSFD------KTLKVWDTNTLQTADVFNFEETVY--SHHMSPVSTKHCLVAVGTRG-------PKVQLCDLKSGS 177 (408)
T ss_dssp TCEEEEETT------SEEEEEETTTTEEEEEEECSSCEE--EEEECSSCSSCCEEEEEESS-------SSEEEEESSSSC
T ss_pred cEEEEEeCC------CeEEEeeCCCCccceeccCCCcee--eeEeecCCCCCcEEEEEcCC-------CeEEEEeCCCcc
Confidence 467776644 368899988876443322222111 11111 33466666653 478899987664
Q ss_pred eEEcCCCCCCccceEEEEE--CCE-EEEEecCCCCceeEEEEeCCCC
Q 014222 245 WSFISDMSTAMVPFIGVVY--EGK-WFLKGLGSHRQVLSEAYQPETD 288 (428)
Q Consensus 245 W~~~~~~p~~~~~~~~~~~--~g~-lyv~Gg~~~~~~~i~~yd~~~~ 288 (428)
-... +...........+ ++. +++.|+.+. .+..||..+.
T Consensus 178 ~~~~--~~~~~~~v~~~~~~~~~~~ll~~~~~dg---~i~i~d~~~~ 219 (408)
T 4a11_B 178 CSHI--LQGHRQEILAVSWSPRYDYILATASADS---RVKLWDVRRA 219 (408)
T ss_dssp CCEE--ECCCCSCEEEEEECSSCTTEEEEEETTS---CEEEEETTCS
T ss_pred eeee--ecCCCCcEEEEEECCCCCcEEEEEcCCC---cEEEEECCCC
Confidence 3211 1111111122222 333 566665332 3667887654
No 158
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.69 E-value=0.34 Score=44.05 Aligned_cols=195 Identities=9% Similarity=-0.050 Sum_probs=99.4
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEe-CCEEEEEeeeCCC-----------CCCCce
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLS-GCHLYLFGGKDPL-----------KGSMRR 185 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~-----------~~~~~~ 185 (428)
++.|||.... ..+..||+.+++.+.+...........-..+++.. ++.||+.-..... ......
T Consensus 91 ~g~l~v~d~~----~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 166 (322)
T 2fp8_A 91 NNQLYIVDCY----YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGR 166 (322)
T ss_dssp TTEEEEEETT----TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEE
T ss_pred CCcEEEEECC----CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCce
Confidence 4667776422 24788998877655543211110011123455554 3479987422100 012357
Q ss_pred EEEEECCCCceeeCCC-CCcCCcceeeEEE-CC-EEEEEccccCCCCCCCCeEEEEeCCCC---ceEEcCCCCCCccceE
Q 014222 186 VIFYSARTNKWHRAPD-MLRRRHFFGSCVI-NN-CLYVAGGENGGVHRSLRSAEVYDPNKN---RWSFISDMSTAMVPFI 259 (428)
Q Consensus 186 v~~yd~~t~~W~~~~~-~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~v~~yd~~t~---~W~~~~~~p~~~~~~~ 259 (428)
+++||+.+++...+.. +.. ..++++- ++ .||+.-.. ...+.+||..+. ..+.+..++. ..
T Consensus 167 v~~~d~~~~~~~~~~~~~~~---p~gia~~~dg~~lyv~d~~-------~~~I~~~~~~~~~~~~~~~~~~~~g----P~ 232 (322)
T 2fp8_A 167 LIKYDPSTKETTLLLKELHV---PGGAEVSADSSFVLVAEFL-------SHQIVKYWLEGPKKGTAEVLVKIPN----PG 232 (322)
T ss_dssp EEEEETTTTEEEEEEEEESC---CCEEEECTTSSEEEEEEGG-------GTEEEEEESSSTTTTCEEEEEECSS----EE
T ss_pred EEEEeCCCCEEEEeccCCcc---CcceEECCCCCEEEEEeCC-------CCeEEEEECCCCcCCccceEEeCCC----CC
Confidence 9999998877654321 111 1123333 33 58887432 257899998753 3333332221 22
Q ss_pred EEEE--CCEEEEEecCC-------CCceeEEEEeCCCCCeEecCCCCcC-CCCC-ceEEECCeEEEEEccCCcEEEEEeC
Q 014222 260 GVVY--EGKWFLKGLGS-------HRQVLSEAYQPETDSWFPVYDGMVA-GWRN-PSASLNRHLYALDCKDGCKIRVYDE 328 (428)
Q Consensus 260 ~~~~--~g~lyv~Gg~~-------~~~~~i~~yd~~~~~W~~~~~~~~~-~~~~-~~~~~~~~lyv~gG~~~~~i~~yd~ 328 (428)
...+ +|.|||..... .....+.+||+....-..+..+... .... .++.-+++||+.+.. .+.|.+|++
T Consensus 233 gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~-~~~i~~~~~ 311 (322)
T 2fp8_A 233 NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLF-HGSVGILVY 311 (322)
T ss_dssp EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSS-CSEEEEEEC
T ss_pred CeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecC-CCceEEEec
Confidence 2233 67899875321 1123478999975544444321111 1112 234568899987643 458999987
Q ss_pred CCC
Q 014222 329 VTD 331 (428)
Q Consensus 329 ~~~ 331 (428)
+.+
T Consensus 312 ~~~ 314 (322)
T 2fp8_A 312 DKK 314 (322)
T ss_dssp ---
T ss_pred ccc
Confidence 644
No 159
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.67 E-value=1.5 Score=41.42 Aligned_cols=214 Identities=13% Similarity=0.044 Sum_probs=115.4
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCc----eeeCCCCCcCC
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNK----WHRAPDMLRRR 206 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~----W~~~~~~~~~r 206 (428)
..+..+|+....+..+.+-. ....++++. .++.||+.-- ....++++++.... ...+.... ..
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~-----~~~~~l~~d~~~~~lywsD~------~~~~I~~~~~~g~~~~~~~~~~~~~~-~~ 159 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNL-----RNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRD-IQ 159 (400)
T ss_dssp TEEEEECTTSCSCEEEECSC-----SCEEEEEEETTTTEEEEEET------TTTEEEEEEC------CCCEEEECSS-CS
T ss_pred ceeEEEccCCcceeEecccc-----CcceEEeeeeccCceEEEec------CCCeEEEEEcccCCCCCcceEEEeCC-CC
Confidence 36788888877766653321 223455554 2338998832 23478888886521 22221100 11
Q ss_pred cceeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcC--CCCCCccceEEEE--ECCEEEEEecCCCCceeE
Q 014222 207 HFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFIS--DMSTAMVPFIGVV--YEGKWFLKGLGSHRQVLS 280 (428)
Q Consensus 207 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~~~~~~~~~--~~g~lyv~Gg~~~~~~~i 280 (428)
.-.++++ .++.||+.-.. ...++++|+....-+.+. .+..+ ...++ .++.||+.-... ...|
T Consensus 160 ~p~glavD~~~~~lY~~d~~-------~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~~--~~~I 227 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT--PAKI 227 (400)
T ss_dssp CEEEEEEETTTTEEEEEETT-------TTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECSS--SCCE
T ss_pred CcccEEEEecCCceEEEECC-------CCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCCC--CCEE
Confidence 1223444 37899998543 258899999877554442 22111 22333 378999875221 2357
Q ss_pred EEEeCCCCCeEecCCCCcCCCCCc--eEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEE
Q 014222 281 EAYQPETDSWFPVYDGMVAGWRNP--SAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVP 356 (428)
Q Consensus 281 ~~yd~~~~~W~~~~~~~~~~~~~~--~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~ 356 (428)
+++++....=+.+.. .....+ .++ .+++||+..... ..|+++|.+...-..+...+..... ..++..
T Consensus 228 ~~~~~dG~~~~~~~~---~~l~~P~glavd~~~~~lY~aD~~~-~~I~~~d~dG~~~~~~~~~~~~l~~-----P~gl~v 298 (400)
T 3p5b_L 228 KKGGLNGVDIYSLVT---ENIQWPNGITLDLLSGRLYWVDSKL-HSISSIDVNGGNRKTILEDEKRLAH-----PFSLAV 298 (400)
T ss_dssp EEEETTSCSCEEEEC---SSCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCCCEEEEECSSTTSS-----EEEEEE
T ss_pred EEEeCCCCccEEEEE---CCCCceEEEEEEeCCCEEEEEECCC-CEEEEEeCCCCccEEEEeCCCCCCC-----CEEEEE
Confidence 888886543332211 111122 333 368999998544 5899999886554444322222222 256677
Q ss_pred eCCeEEEEeCCCeEEEEEeecCCC
Q 014222 357 LNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 357 ~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.++.||+.-.. ...|..+|..+
T Consensus 299 ~~~~lywtd~~--~~~V~~~~~~~ 320 (400)
T 3p5b_L 299 FEDKVFWTDII--NEAIFSANRLT 320 (400)
T ss_dssp ETTEEEEEESS--SCSEEEEESSS
T ss_pred eCCEEEEecCC--CCeEEEEEcCC
Confidence 89999998632 23356666433
No 160
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.67 E-value=1.7 Score=45.13 Aligned_cols=209 Identities=14% Similarity=0.079 Sum_probs=111.3
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEe-CCEEEEEeeeCCCCCCCceEEEEECCCC----ceee-CC-CCCcC
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLS-GCHLYLFGGKDPLKGSMRRVIFYSARTN----KWHR-AP-DMLRR 205 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~----~W~~-~~-~~~~~ 205 (428)
.+..++.....+..+.... ....++++.. +++||+.-. ....++++++... .... +. .+..+
T Consensus 405 ~Ir~i~l~~~~~~~l~~~~-----~~~~gl~~d~~~~~lY~sD~------~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPNL-----RNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp SEEEECTTSCCCEEEECSC-----SSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECSSCSCC
T ss_pred ceeEeeccCCcceeeecCC-----CceEEEeecccCCeeEEeec------cceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 4556666655555443221 1223444432 337998843 2346778877542 2222 22 12211
Q ss_pred CcceeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcC--CCCCCccceEEEE--ECCEEEEEecCCCCcee
Q 014222 206 RHFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFIS--DMSTAMVPFIGVV--YEGKWFLKGLGSHRQVL 279 (428)
Q Consensus 206 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~~~~~~~~~--~~g~lyv~Gg~~~~~~~ 279 (428)
.++++ .+++||+.-.. ...|+++|+....-+.+. .+..+ ..+++ .++.||+.-... ...
T Consensus 474 ---~GLAvD~~~~~LY~tD~~-------~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~g~--~~~ 538 (791)
T 3m0c_C 474 ---DGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT--PAK 538 (791)
T ss_dssp ---CEEEEETTTTEEEEEETT-------TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS--SCE
T ss_pred ---ceeeeeecCCcEEEEecC-------CCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEEecCCC--CCe
Confidence 23444 36799998432 368999999876654442 22211 22333 368999985221 235
Q ss_pred EEEEeCCCCCeEecCCCCcCCCCCc--eEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEE
Q 014222 280 SEAYQPETDSWFPVYDGMVAGWRNP--SAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALV 355 (428)
Q Consensus 280 i~~yd~~~~~W~~~~~~~~~~~~~~--~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~ 355 (428)
|+++++....-+.+.. .....+ .++ .+++||+..... ..|+++|++...=..+......... ..++.
T Consensus 539 I~~~~~dG~~~~~lv~---~~l~~P~GLavD~~~~~LYwaD~~~-~~I~~~d~dG~~~~~v~~~~~~l~~-----P~gla 609 (791)
T 3m0c_C 539 IKKGGLNGVDIYSLVT---ENIQWPNGITLDLLSGRLYWVDSKL-HSISSIDVNGGNRKTILEDEKRLAH-----PFSLA 609 (791)
T ss_dssp EEEEETTSCCEEEEEC---SSCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCSCEEEEECTTTTSS-----EEEEE
T ss_pred EEEEecCCCceEEEEe---CCCCCceEEEEecCCCeEEEEeCCC-CcEEEEecCCCceEEEecCCCccCC-----CCEEE
Confidence 7888886554433322 111122 232 368999998544 5899999987654444321112222 36777
Q ss_pred EeCCeEEEEeCCCeEEEEEeecC
Q 014222 356 PLNGKLCIIRNNMSISLVDVSKS 378 (428)
Q Consensus 356 ~~~~~lyv~GG~~~~~~v~~yd~ 378 (428)
..+++||+.-... ..|...|.
T Consensus 610 v~~~~lYwtD~~~--~~I~~~dk 630 (791)
T 3m0c_C 610 VFEDKVFWTDIIN--EAIFSANR 630 (791)
T ss_dssp EETTEEEEEETTT--TEEEEEET
T ss_pred EeCCEEEEEECCC--CEEEEEeC
Confidence 7899999986432 23445553
No 161
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.64 E-value=0.51 Score=42.99 Aligned_cols=172 Identities=10% Similarity=0.064 Sum_probs=90.1
Q ss_pred ceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCC----CceEEc-C-CCCCCc
Q 014222 184 RRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNK----NRWSFI-S-DMSTAM 255 (428)
Q Consensus 184 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t----~~W~~~-~-~~p~~~ 255 (428)
..+.++|+.+.....+-+ ....-.+++.. +++||+.... ...+.++|+.+ ..-..+ + .+..
T Consensus 10 ~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~-------~~~I~~~~~~g~~~~~~~~~~~~~~~~~-- 78 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRDIQA-- 78 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETT-------TTEEEEEEC--------CEEEECSSCSC--
T ss_pred CeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECC-------CCcEEEEECCCCCCCcccEEEEeCCCCC--
Confidence 357888888776554321 11222344443 5799998543 26889999876 222222 1 1111
Q ss_pred cceEEEE--ECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCCcEEEEEeCCCC
Q 014222 256 VPFIGVV--YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 256 ~~~~~~~--~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~ 331 (428)
....++ .++.||+.-.. ...++++|+....-+.+... ....-...++ .++.||+........|++++++..
T Consensus 79 -p~glavd~~~~~ly~~d~~---~~~I~~~~~~g~~~~~~~~~-~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~ 153 (316)
T 1ijq_A 79 -PDGLAVDWIHSNIYWTDSV---LGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (316)
T ss_dssp -CCEEEEETTTTEEEEEETT---TTEEEEEETTSSSEEEEEEC-TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred -cCEEEEeecCCeEEEEECC---CCEEEEEeCCCCceEEEEEC-CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC
Confidence 123333 47899998432 23578888876543333210 0011112333 378999987433358999998765
Q ss_pred ceeeCcccccccCCcccccceEEEE--eCCeEEEEeCCCeEEEEEeecCCC
Q 014222 332 SWSKHIDSKMHLGNSRALEAAALVP--LNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 332 ~W~~v~~~~~~~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.-+.+... ....+ .+++. .+++||+.-... ..|+++|.+.
T Consensus 154 ~~~~~~~~--~~~~P-----~gla~d~~~~~lY~~D~~~--~~I~~~d~dg 195 (316)
T 1ijq_A 154 DIYSLVTE--NIQWP-----NGITLDLLSGRLYWVDSKL--HSISSIDVNG 195 (316)
T ss_dssp CEEEEECS--SCSCE-----EEEEEETTTTEEEEEETTT--TEEEEEETTS
T ss_pred CeEEEEEC--CCCCc-----eEEEEeccCCEEEEEECCC--CeEEEEecCC
Confidence 44433221 11111 23333 368899875432 3466676654
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.64 E-value=0.49 Score=43.91 Aligned_cols=196 Identities=5% Similarity=-0.107 Sum_probs=94.6
Q ss_pred CceEEEEECCCCceeeCCCCCcCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCcc-ceEE
Q 014222 183 MRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMV-PFIG 260 (428)
Q Consensus 183 ~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~-~~~~ 260 (428)
...++++|..+++-+.+..-. .........- +++.+++.... ........++.+|..+.....+........ ....
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~sp~dg~~l~~~~~~-~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQEN-QWLGHPIYRPYDDSTVAFCHEG-PHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEF 244 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECS-CTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEE
T ss_pred cceEEEEECCCCceEEeecCC-ccccccEECCCCCCEEEEEEec-CCCCCcceEEEEeCCCCceEEeeeCCCCcccccce
Confidence 468999999988765553221 1112222222 45443333321 112224589999998877666654332111 1112
Q ss_pred EEECCE-EEEEecCC-CCceeEEEEeCCCCCeEecCCCCcC-----CCCCceEEECC-eEEEEE-------ccCCcEEEE
Q 014222 261 VVYEGK-WFLKGLGS-HRQVLSEAYQPETDSWFPVYDGMVA-----GWRNPSASLNR-HLYALD-------CKDGCKIRV 325 (428)
Q Consensus 261 ~~~~g~-lyv~Gg~~-~~~~~i~~yd~~~~~W~~~~~~~~~-----~~~~~~~~~~~-~lyv~g-------G~~~~~i~~ 325 (428)
..-+|+ |+...... .....++.+|+.+++-+.+...+.. ........-+| .|++.. +.....|++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~ 324 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYV 324 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEE
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEE
Confidence 222565 54433221 1223489999998886665432210 00111222233 343321 022357999
Q ss_pred EeCCCCceeeCcccccccCC---ccc-ccceEEEEeCC-eEEEEeCCCeEEEEEeecCCC
Q 014222 326 YDEVTDSWSKHIDSKMHLGN---SRA-LEAAALVPLNG-KLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 326 yd~~~~~W~~v~~~~~~~~~---~~~-~~~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+|+++++-..+......... .+. .........++ .|++.........++.+|+..
T Consensus 325 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 325 FNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp EETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred EeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 99998877665432210000 000 00122333444 566666555566788899887
No 163
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.63 E-value=0.2 Score=51.28 Aligned_cols=213 Identities=14% Similarity=0.082 Sum_probs=109.3
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCC----ceeeCC--CCCcC
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTN----KWHRAP--DMLRR 205 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~----~W~~~~--~~~~~ 205 (428)
.+..+++.+.....+..... ..+++++. .++.||+.-- ....++++++.+. .-..+. .+..+
T Consensus 387 ~I~~id~~~~~~~~~~~~~~-----~p~gla~d~~~~~Ly~sD~------~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P 455 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDIQAP 455 (699)
T ss_dssp C-CEECTTSCCEECCSCCCT-----TCCCCEEETTTTEEEECCT------TTTSBEEEESCCCCC-CCCCCBCCSCC--C
T ss_pred ceEEEeCCCCcceeeeccCc-----ceEEEccccccCeEEEEec------CCCeEEEEecCCCCCCcceEEEEeCCCCCc
Confidence 56677877776665533221 22344444 2337888732 2346888888751 111111 11111
Q ss_pred CcceeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCC--CCCCccceEEEE--ECCEEEEEecCCCCcee
Q 014222 206 RHFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISD--MSTAMVPFIGVV--YEGKWFLKGLGSHRQVL 279 (428)
Q Consensus 206 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~--~p~~~~~~~~~~--~~g~lyv~Gg~~~~~~~ 279 (428)
.++++ .+++||+.-.. ...+.++|+....-+.+.. +..+ ..+++ .++.||+..... ...
T Consensus 456 ---~glavD~~~g~LY~tD~~-------~~~I~v~d~dg~~~~~l~~~~~~~P---~giavDp~~g~ly~td~~~--~~~ 520 (699)
T 1n7d_A 456 ---DGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFREQGSKP---RAIVVDPVHGFMYWTDWGT--PAK 520 (699)
T ss_dssp ---CCEECCCSSSBCEECCTT-------TSCEEEEBSSSCCEEEECCCSSCCC---CCEECCSSSSCCEECCCSS--SCC
T ss_pred ---ceEEEEeeCCcEEEEecc-------CCeEEEEecCCCceEEEEeCCCCCc---ceEEEccCCCcEEEcccCC--CCe
Confidence 22333 46789986322 3578999988765444322 2222 12222 367889864211 234
Q ss_pred EEEEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEe
Q 014222 280 SEAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPL 357 (428)
Q Consensus 280 i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~ 357 (428)
|+++++....-+.+... ....-.+.++ .+++||+..... ..|+++|+....-..+.......+.+ .++...
T Consensus 521 I~~~~~dG~~~~~l~~~-~l~~PnGlavd~~~~~LY~aD~~~-~~I~~~d~dG~~~~~~~~~~~~~~~P-----~glavd 593 (699)
T 1n7d_A 521 IKKGGLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKL-HSISSIDVNGGNRKTILEDEKRLAHP-----FSLAVF 593 (699)
T ss_dssp EEBCCSSSCCCCEESCS-SCSSCCCEEECTTTCCEEEEETTT-TEEEEECSSSSCCEEECCCSSSCSSC-----CCCEEE
T ss_pred EEEEeCCCCCeeEEEeC-CCCCccEEEEeccCCEEEEEecCC-CeEEEEccCCCceEEEEecCCcCCCc-----eEeEEE
Confidence 77777754433332211 1111112333 258999998543 58999999765444443221122222 455567
Q ss_pred CCeEEEEeCCCeEEEEEeecCCC
Q 014222 358 NGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 358 ~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
++.||+.-.. ...|.++|+.+
T Consensus 594 ~~~lywtd~~--~~~V~~~d~~~ 614 (699)
T 1n7d_A 594 EDKVFWTDII--NEAIFSANRLT 614 (699)
T ss_dssp TTEEEEECST--TTCEEEEETTT
T ss_pred CCEEEEEeCC--CCeEEEEEccC
Confidence 8899998532 23456676543
No 164
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.61 E-value=2.3 Score=43.27 Aligned_cols=240 Identities=11% Similarity=0.005 Sum_probs=122.6
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCC-------CCCCceEEEEECCCCcee--eCCCC
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPL-------KGSMRRVIFYSARTNKWH--RAPDM 202 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~-------~~~~~~v~~yd~~t~~W~--~~~~~ 202 (428)
..++++|..+++..... ++. .+.. +++-.++..||... .+.. ......+++++..|..-. .+-..
T Consensus 155 ~~i~v~dl~tg~~~~~~-~~~---~k~~-~~~WsDg~~l~y~~-~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~ 228 (693)
T 3iuj_A 155 REIHLMDVESKQPLETP-LKD---VKFS-GISWLGNEGFFYSS-YDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA 228 (693)
T ss_dssp EEEEEEETTTCSEEEEE-EEE---EESC-CCEEETTTEEEEEE-SSCCC-------CCCCEEEEEETTSCGGGCEEEESC
T ss_pred EEEEEEECCCCCCCccc-cCC---ceec-cEEEeCCCEEEEEE-ecCcccccccccCCCcEEEEEECCCCcccceEEEec
Confidence 57889999998865431 111 0111 22222554455443 2211 023457888888776531 12111
Q ss_pred Cc--CCcceeeE-EECCEEEEEccccCCCCCCCCeEEEEeCCCC--ceEEcCCCCCCccceEEEEECCEEEEEecCCCCc
Q 014222 203 LR--RRHFFGSC-VINNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQ 277 (428)
Q Consensus 203 ~~--~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~ 277 (428)
+. +....++. .-+++..++.... ....+.++.+|..+. .|..+..-...... ....-++.||+........
T Consensus 229 ~~~~~~~~~~~~~SpDg~~l~~~~~~---~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~~~~ 304 (693)
T 3iuj_A 229 IPAQHHRYVGATVTEDDRFLLISAAN---STSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRDAPN 304 (693)
T ss_dssp SGGGCCSEEEEEECTTSCEEEEEEES---SSSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTT
T ss_pred CCCCCeEEEEEEEcCCCCEEEEEEcc---CCCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCCCCC
Confidence 11 12122222 2345543333221 112368899998765 67776543322222 2344578999887544445
Q ss_pred eeEEEEeCCCC---CeEecCCCCcCCCCCceEEECCeEEEEEccCC-cEEEEEeCCCCceeeCcccccccCCcccccceE
Q 014222 278 VLSEAYQPETD---SWFPVYDGMVAGWRNPSASLNRHLYALDCKDG-CKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAA 353 (428)
Q Consensus 278 ~~i~~yd~~~~---~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~-~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~ 353 (428)
..++.+|+.+. .|+.+.+...... .....++.|++....++ ..|+++|.+.+....+.. +.. +.. ...+
T Consensus 305 ~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~-p~~-~~~---~~~~ 377 (693)
T 3iuj_A 305 RRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVAL-PGL-GSV---SGFN 377 (693)
T ss_dssp CEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECC-SSS-SEE---EECC
T ss_pred CEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeec-CCC-ceE---Eeee
Confidence 56889998763 4887654332222 33345677766654443 469999998765555431 211 000 0000
Q ss_pred EEEeCCeEEEE-eCCCeEEEEEeecCCCCCCCccccccceecc
Q 014222 354 LVPLNGKLCII-RNNMSISLVDVSKSNGERGASAEHLWETISG 395 (428)
Q Consensus 354 ~~~~~~~lyv~-GG~~~~~~v~~yd~~~~~~~~~~~~W~~~~~ 395 (428)
....++.|++. .+......++.||..+ ..++.+..
T Consensus 378 ~~~d~~~l~~~~ss~~tP~~l~~~d~~~-------g~~~~l~~ 413 (693)
T 3iuj_A 378 GKHDDPALYFGFENYAQPPTLYRFEPKS-------GAISLYRA 413 (693)
T ss_dssp CCTTCSCEEEEEECSSSCCEEEEECTTT-------CCEEEEEC
T ss_pred cCCCCCEEEEEecCCCCCCEEEEEECCC-------CeEEEEEe
Confidence 01123445543 3444456789999888 66665543
No 165
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.60 E-value=0.49 Score=43.11 Aligned_cols=198 Identities=10% Similarity=0.075 Sum_probs=90.4
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCC--CceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEE
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSART--NKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEV 237 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t--~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~ 237 (428)
++...+++.++.|+.++ .+.+||..+ ..+..+..+.........+.+ ++.+++.|+.+ ..+.+
T Consensus 113 v~~sp~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-------~~i~i 179 (330)
T 2hes_X 113 VAWSNDGYYLATCSRDK------SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-------DTVRI 179 (330)
T ss_dssp EEECTTSCEEEEEETTS------CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-------SCEEE
T ss_pred EEECCCCCEEEEEeCCC------EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-------CeEEE
Confidence 33333335777776543 577888743 233332222211111122222 46677777764 47888
Q ss_pred EeCCCCceEEcCCCCCCccceEEEEE--C--CEEEEEecCCCCceeEEEEeCCC------CCeEecCCCCcCCCC-CceE
Q 014222 238 YDPNKNRWSFISDMSTAMVPFIGVVY--E--GKWFLKGLGSHRQVLSEAYQPET------DSWFPVYDGMVAGWR-NPSA 306 (428)
Q Consensus 238 yd~~t~~W~~~~~~p~~~~~~~~~~~--~--g~lyv~Gg~~~~~~~i~~yd~~~------~~W~~~~~~~~~~~~-~~~~ 306 (428)
||..+..|..+..+.........+.+ + +...+.|+.+. . +..||..+ ..|............ ...+
T Consensus 180 W~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-~--v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 256 (330)
T 2hes_X 180 WKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-T--VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNV 256 (330)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-C--EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEE
T ss_pred EECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-e--EEEEEecCCCccccceeEEeeecccccccceEEE
Confidence 88887777655433221111122222 2 33444454332 2 33454432 235443321111111 1122
Q ss_pred E-ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEe--CCeEEEEeCCCeEEEEEeecCCC
Q 014222 307 S-LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPL--NGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 307 ~-~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
. ..+.+++.||.++ .|.+||..+..|..+.......... ......... ++++++.|+.++. +.+||.++
T Consensus 257 ~~s~~~~l~s~~~dg-~v~iw~~~~~~~~~~~~~~~~h~~~--~v~~v~~~~~~~~~~las~s~Dg~--v~~W~~~~ 328 (330)
T 2hes_X 257 AWGFNGLIASVGADG-VLAVYEEVDGEWKVFAKRALCHGVY--EINVVKWLELNGKTILATGGDDGI--VNFWSLEK 328 (330)
T ss_dssp EECTTSCEEEEETTS-CEEEEEEETTEEEEEEEESCTTTTS--CEEEEEEC-----CCEEEEETTSE--EEEEEC--
T ss_pred EEcCCCEEEEEeCCC-EEEEEEcCCCceEEEeccccccccc--eEEEEEEecCCCceEEEEecCCCc--EEEEEecc
Confidence 2 2445566666654 7899999888887654321111110 001111222 5678888887654 45566543
No 166
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.60 E-value=1.2 Score=39.69 Aligned_cols=226 Identities=12% Similarity=0.060 Sum_probs=114.4
Q ss_pred ceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceee
Q 014222 119 EWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHR 198 (428)
Q Consensus 119 ~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 198 (428)
+.||+.+.. ...++.||+.++ ...+.... ..-.+++...++++|+... ....+.+||+.+++.+.
T Consensus 40 ~~l~~~~~~---~~~i~~~~~~~~-~~~~~~~~-----~~~~~l~~~~dg~l~v~~~------~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 40 SAVIFSDVR---QNRTWAWSDDGQ-LSPEMHPS-----HHQNGHCLNKQGHLIACSH------GLRRLERQREPGGEWES 104 (296)
T ss_dssp TEEEEEEGG---GTEEEEEETTSC-EEEEESSC-----SSEEEEEECTTCCEEEEET------TTTEEEEECSTTCCEEE
T ss_pred CEEEEEeCC---CCEEEEEECCCC-eEEEECCC-----CCcceeeECCCCcEEEEec------CCCeEEEEcCCCCcEEE
Confidence 346776632 237889999987 55543211 1223455544436877642 12479999998888766
Q ss_pred CCCCCc----CCcceeeEEECCEEEEE----cccc------CCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE-E
Q 014222 199 APDMLR----RRHFFGSCVINNCLYVA----GGEN------GGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV-Y 263 (428)
Q Consensus 199 ~~~~~~----~r~~~~~~~~~~~iyv~----GG~~------~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~ 263 (428)
+..... .+....+..-+|++|+. |... .........++.||+. .+...+.... ......+. -
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~~~~gi~~s~ 181 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR--VKPNGLAFLP 181 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC--SSEEEEEECT
T ss_pred EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC--CCCccEEECC
Confidence 532211 11111222236788886 4321 0001123578999987 5444432211 11112222 2
Q ss_pred CCEEEEEecCCCCceeEEEEeCC-CCCe-E--ecCCCCcCCCCCceE-EECCeEEEEEccCCcEEEEEeCCCCceeeCcc
Q 014222 264 EGKWFLKGLGSHRQVLSEAYQPE-TDSW-F--PVYDGMVAGWRNPSA-SLNRHLYALDCKDGCKIRVYDEVTDSWSKHID 338 (428)
Q Consensus 264 ~g~lyv~Gg~~~~~~~i~~yd~~-~~~W-~--~~~~~~~~~~~~~~~-~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~ 338 (428)
++++++.... ...+++||+. +++. . .+-. .....-...+ .-+|+||+.. +..|.+||++.+....+..
T Consensus 182 dg~~lv~~~~---~~~i~~~~~~~~g~~~~~~~~~~-~~~~~p~~i~~d~~G~l~v~~---~~~v~~~~~~g~~~~~~~~ 254 (296)
T 3e5z_A 182 SGNLLVSDTG---DNATHRYCLNARGETEYQGVHFT-VEPGKTDGLRVDAGGLIWASA---GDGVHVLTPDGDELGRVLT 254 (296)
T ss_dssp TSCEEEEETT---TTEEEEEEECSSSCEEEEEEEEC-CSSSCCCSEEEBTTSCEEEEE---TTEEEEECTTSCEEEEEEC
T ss_pred CCCEEEEeCC---CCeEEEEEECCCCcCcCCCeEee-CCCCCCCeEEECCCCCEEEEc---CCeEEEECCCCCEEEEEEC
Confidence 5666644432 2247788876 4554 1 1111 1111111222 2478899887 3589999998665444432
Q ss_pred cccccCCcccccceEEEEeC-CeEEEEeCCCeEEEEEeecCCC
Q 014222 339 SKMHLGNSRALEAAALVPLN-GKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~-~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+.. . ...+....+ +.||+.... .++.+++.+
T Consensus 255 -~~~---~---~~~~f~~~d~~~L~v~t~~----~l~~~~~~~ 286 (296)
T 3e5z_A 255 -PQT---T---SNLCFGGPEGRTLYMTVST----EFWSIETNV 286 (296)
T ss_dssp -SSC---C---CEEEEESTTSCEEEEEETT----EEEEEECSC
T ss_pred -CCC---c---eeEEEECCCCCEEEEEcCC----eEEEEEccc
Confidence 111 1 112221223 368876542 477888887
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.59 E-value=0.58 Score=47.23 Aligned_cols=190 Identities=9% Similarity=-0.073 Sum_probs=104.6
Q ss_pred eeEEEEeCCC------CceEeCC-CCCCCCccccccEEEE-EeCCEEEEEeeeCCCCC--CCceEEEEECC-CC---cee
Q 014222 132 ISWHAFDPIY------QLWQPLP-PIPKEYSEALGFGCAV-LSGCHLYLFGGKDPLKG--SMRRVIFYSAR-TN---KWH 197 (428)
Q Consensus 132 ~~~~~yd~~~------~~W~~l~-~~~~~~~~r~~~~~~~-~~~~~lyv~GG~~~~~~--~~~~v~~yd~~-t~---~W~ 197 (428)
..++.+|..+ ++...+. .-.. .....+. -+|..|+ +...+.... ...+++++|.. ++ ..+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~SpDG~~la-~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR-----FVTGPRLSPDGRQAV-WLAWDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS-----EECCCEECTTSSEEE-EEEECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC-----cccCceECCCCCEEE-EEECCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 5789999988 6666665 3211 1122222 3453344 443332111 23589999998 56 333
Q ss_pred eCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCcc-------ceEEEEE-CCEEE
Q 014222 198 RAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMV-------PFIGVVY-EGKWF 268 (428)
Q Consensus 198 ~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~-------~~~~~~~-~g~ly 268 (428)
.+..-. .......+. -+|++|+.+..+ + ...++.+|+.+.++..+........ ....+.. +++++
T Consensus 235 ~l~~~~-~~~~~~~~~spdg~l~~~~~~~-~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 235 TLLGGP-EEAIAQAEWAPDGSLIVATDRT-G----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp EEEEET-TBCEEEEEECTTSCEEEEECTT-S----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEE
T ss_pred EeCCCC-CceEcceEECCCCeEEEEECCC-C----CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEE
Confidence 332111 111112222 267777766543 1 2479999998888887764322110 1123333 67777
Q ss_pred EEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCce-EEECCeEEEEEccCC--cEEEEEeCCCCceeeCc
Q 014222 269 LKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPS-ASLNRHLYALDCKDG--CKIRVYDEVTDSWSKHI 337 (428)
Q Consensus 269 v~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~lyv~gG~~~--~~i~~yd~~~~~W~~v~ 337 (428)
+.+.. ....++.+|..++..+.+.... ...... ..-++.++++.+... ..++.+|.++.+...+.
T Consensus 309 ~~~~~--~~~~l~~~d~~~~~~~~l~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 309 VVHGK--GAAVLGILDPESGELVDAAGPW--TEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EEEBS--SSCEEEEEETTTTEEEECCSSC--CEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred EEEEc--CccEEEEEECCCCcEEEecCCC--CeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence 77654 4556788899888877775421 111122 234566666654333 36888999888877664
No 168
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.56 E-value=1.4 Score=40.29 Aligned_cols=224 Identities=9% Similarity=0.025 Sum_probs=109.9
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
.+.+|+.|... .++.-+-.-.+|+.+......+ ...+.++...++.+|+.|.. ..+++-.-.-.+|+
T Consensus 89 ~~~~~~~g~~g----~i~~S~DgG~tW~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~-------g~v~~S~DgG~tW~ 155 (327)
T 2xbg_A 89 GNEGWIVGEPP----IMLHTTDGGQSWSQIPLDPKLP--GSPRLIKALGNGSAEMITNV-------GAIYRTKDSGKNWQ 155 (327)
T ss_dssp TTEEEEEEETT----EEEEESSTTSSCEECCCCTTCS--SCEEEEEEEETTEEEEEETT-------CCEEEESSTTSSEE
T ss_pred CCeEEEEECCC----eEEEECCCCCCceECccccCCC--CCeEEEEEECCCCEEEEeCC-------ccEEEEcCCCCCCE
Confidence 34566665321 3444444456899986432110 11244555554478877631 13444333455798
Q ss_pred eCCCCCcCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEEE-eCCCCceEEcCCCCCCccceEEEE-ECCEEEEEecCC
Q 014222 198 RAPDMLRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVY-DPNKNRWSFISDMSTAMVPFIGVV-YEGKWFLKGLGS 274 (428)
Q Consensus 198 ~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~y-d~~t~~W~~~~~~p~~~~~~~~~~-~~g~lyv~Gg~~ 274 (428)
.+.... +...+.++.. ++.+|++|.. ..++.- |..-.+|+.+.... ......++. -++.+|+.+...
T Consensus 156 ~~~~~~-~~~~~~~~~~~~~~~~~~g~~--------G~~~~S~d~gG~tW~~~~~~~-~~~~~~~~~~~~g~~~~~~~~G 225 (327)
T 2xbg_A 156 ALVQEA-IGVMRNLNRSPSGEYVAVSSR--------GSFYSTWEPGQTAWEPHNRTT-SRRLHNMGFTPDGRLWMIVNGG 225 (327)
T ss_dssp EEECSC-CCCEEEEEECTTSCEEEEETT--------SSEEEEECTTCSSCEEEECCS-SSCEEEEEECTTSCEEEEETTT
T ss_pred EeecCC-CcceEEEEEcCCCcEEEEECC--------CcEEEEeCCCCCceeECCCCC-CCccceeEECCCCCEEEEeCCc
Confidence 875422 2223333333 4566665532 123333 33367899875422 222233332 367888876321
Q ss_pred CCceeEEEEeCC-CCCeEecCCC-CcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCccccc
Q 014222 275 HRQVLSEAYQPE-TDSWFPVYDG-MVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALE 350 (428)
Q Consensus 275 ~~~~~i~~yd~~-~~~W~~~~~~-~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~ 350 (428)
.++..+.. -.+|+.+..+ .........+.. ++.+|++|+.. .+++-.-...+|+.+..........
T Consensus 226 ----~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g--~i~~S~DgG~tW~~~~~~~~~~~~~---- 295 (327)
T 2xbg_A 226 ----KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG--ALLCSQDGGQTWQQDVDVKKVPSNF---- 295 (327)
T ss_dssp ----EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT--CEEEESSTTSSCEECGGGTTSSSCC----
T ss_pred ----eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC--eEEEeCCCCcccEEcCccCCCCCCe----
Confidence 23344322 4589987642 122211122222 67899887632 3544333457999886421111111
Q ss_pred ceEEEEeCCeEEEEeCCCeEEEEEeec
Q 014222 351 AAALVPLNGKLCIIRNNMSISLVDVSK 377 (428)
Q Consensus 351 ~~~~~~~~~~lyv~GG~~~~~~v~~yd 377 (428)
......-++++++.|... .+..++
T Consensus 296 ~~v~~~~~~~~~~~G~~G---~i~~~~ 319 (327)
T 2xbg_A 296 YKILFFSPDQGFILGQKG---ILLRYV 319 (327)
T ss_dssp CEEEEEETTEEEEECSTT---EEEEEC
T ss_pred EEEEEECCCceEEEcCCc---eEEEEc
Confidence 122233467777766543 355666
No 169
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.55 E-value=0.1 Score=49.93 Aligned_cols=144 Identities=9% Similarity=0.015 Sum_probs=74.1
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcc-eeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCce
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHF-FGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRW 245 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~-~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W 245 (428)
.+++.|+.++ .+.+||..++.-..+-.+...... .+++. .++.+++.|+.+ ..+.+||..++.-
T Consensus 133 ~~lasGs~dg------~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-------~~v~iwd~~~~~~ 199 (435)
T 4e54_B 133 STVAVGSKGG------DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-------GTTRLQDFKGNIL 199 (435)
T ss_dssp TCEEEEETTS------CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-------SCEEEEETTSCEE
T ss_pred CEEEEEeCCC------EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-------CEEEEeeccCCce
Confidence 4777777653 578888877653332222111111 12222 245666667654 4788999988766
Q ss_pred EEcCCCCCC-ccceEEE-EECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE---CCeEEEEEccCC
Q 014222 246 SFISDMSTA-MVPFIGV-VYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL---NRHLYALDCKDG 320 (428)
Q Consensus 246 ~~~~~~p~~-~~~~~~~-~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~lyv~gG~~~ 320 (428)
..+...... ....++. .-++.+.+.|+... .+..||.....-..+.. ......++.+ ++.+++.|+.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg---~i~~wd~~~~~~~~~~~---h~~~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 200 RVFASSDTINIWFCSLDVSASSRMVVTGDNVG---NVILLNMDGKELWNLRM---HKKKVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp EEEECCSSCSCCCCCEEEETTTTEEEEECSSS---BEEEEESSSCBCCCSBC---CSSCEEEEEECTTCSSEEEEEETTS
T ss_pred eEEeccCCCCccEEEEEECCCCCEEEEEeCCC---cEeeeccCcceeEEEec---ccceEEeeeecCCCceEEEEecCcc
Confidence 554332221 1112222 23667777775432 36788876543211111 0001112333 344676776654
Q ss_pred cEEEEEeCCCCc
Q 014222 321 CKIRVYDEVTDS 332 (428)
Q Consensus 321 ~~i~~yd~~~~~ 332 (428)
.|.+||..+..
T Consensus 274 -~v~iwd~~~~~ 284 (435)
T 4e54_B 274 -TVKIWDLRQVR 284 (435)
T ss_dssp -BCCEEETTTCC
T ss_pred -eeeEEeccccc
Confidence 78889987654
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.42 E-value=0.23 Score=45.22 Aligned_cols=114 Identities=11% Similarity=0.010 Sum_probs=65.0
Q ss_pred CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE-ECCEEEEEecCC-CCceeEEEEeCCCCCeEe
Q 014222 215 NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV-YEGKWFLKGLGS-HRQVLSEAYQPETDSWFP 292 (428)
Q Consensus 215 ~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~g~lyv~Gg~~-~~~~~i~~yd~~~~~W~~ 292 (428)
+++||+.+... ..+.+||+.+.+...+...+.. ....++. -+|++|+.+... .....+..||+.+.....
T Consensus 55 ~g~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~~-~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 55 QGQLFLLDVFE-------GNIFKINPETKEIKRPFVSHKA-NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD 126 (333)
T ss_dssp TSCEEEEETTT-------CEEEEECTTTCCEEEEEECSSS-SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE
T ss_pred CCCEEEEECCC-------CEEEEEeCCCCcEEEEeeCCCC-CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE
Confidence 56788876542 5789999998887665321111 1122222 377888875322 112357899998887653
Q ss_pred cCCCCcCCCCCceEE--ECCeEEEEEccC-----CcEEEEEeCCCCceeeC
Q 014222 293 VYDGMVAGWRNPSAS--LNRHLYALDCKD-----GCKIRVYDEVTDSWSKH 336 (428)
Q Consensus 293 ~~~~~~~~~~~~~~~--~~~~lyv~gG~~-----~~~i~~yd~~~~~W~~v 336 (428)
+............+. -++++|+..... ...|+.||+++.+...+
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 311111111111222 267888875421 24799999987766554
No 171
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.41 E-value=1.4 Score=39.42 Aligned_cols=213 Identities=10% Similarity=0.059 Sum_probs=101.4
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcc-eee
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHF-FGS 211 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~-~~~ 211 (428)
.+.+||..++.-...-.... ....+++...+++.++.|+.+ ..+.+||..+++-... +...... .++
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~s~s~d------~~i~vwd~~~~~~~~~--~~~h~~~v~~~ 103 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTE----TPVRAGKFIARKNWIIVGSDD------FRIRVFNYNTGEKVVD--FEAHPDYIRSI 103 (304)
T ss_dssp EEEEEETTTTEEEEEEECCS----SCEEEEEEEGGGTEEEEEETT------SEEEEEETTTCCEEEE--EECCSSCEEEE
T ss_pred cEEEEECCCCceeEEeeccC----CcEEEEEEeCCCCEEEEECCC------CEEEEEECCCCcEEEE--EeCCCCcEEEE
Confidence 67788887765322111111 112233333332567777654 3688899887753221 1111111 122
Q ss_pred EEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE---CCEEEEEecCCCCceeEEEEeCCC
Q 014222 212 CVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY---EGKWFLKGLGSHRQVLSEAYQPET 287 (428)
Q Consensus 212 ~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~---~g~lyv~Gg~~~~~~~i~~yd~~~ 287 (428)
+.. ++.+++.|+.+ ..+.+||..+.. .....+.........+.+ ++.+++.|+.+. .+..||..+
T Consensus 104 ~~~~~~~~l~sgs~D-------~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~---~v~iwd~~~ 172 (304)
T 2ynn_A 104 AVHPTKPYVLSGSDD-------LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR---TVKVWSLGQ 172 (304)
T ss_dssp EECSSSSEEEEEETT-------SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTS---EEEEEETTC
T ss_pred EEcCCCCEEEEECCC-------CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCC---eEEEEECCC
Confidence 222 45666667654 578889887652 111111111111122223 345666665432 466888755
Q ss_pred CCe--EecCCCCcCCCCCceEEE----CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeE
Q 014222 288 DSW--FPVYDGMVAGWRNPSASL----NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKL 361 (428)
Q Consensus 288 ~~W--~~~~~~~~~~~~~~~~~~----~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~l 361 (428)
..= ..... .......+.+ ++.+++.|+.++ .|.+||..+.+- +..+...... ........++.+
T Consensus 173 ~~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~s~s~D~-~i~iWd~~~~~~--~~~~~~h~~~----v~~~~~~p~~~~ 242 (304)
T 2ynn_A 173 STPNFTLTTG---QERGVNYVDYYPLPDKPYMITASDDL-TIKIWDYQTKSC--VATLEGHMSN----VSFAVFHPTLPI 242 (304)
T ss_dssp SSCSEEEECC---CTTCEEEEEECCSTTCCEEEEEETTS-EEEEEETTTTEE--EEEEECCSSC----EEEEEECSSSSE
T ss_pred CCccceeccC---CcCcEEEEEEEEcCCCCEEEEEcCCC-eEEEEeCCCCcc--ceeeCCCCCC----EEEEEECCCCCE
Confidence 431 11110 0011111222 456666676654 899999987642 2222211111 123344556677
Q ss_pred EEEeCCCeEEEEEeecCCC
Q 014222 362 CIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 362 yv~GG~~~~~~v~~yd~~~ 380 (428)
++.|+.++. +.+||..+
T Consensus 243 l~s~s~Dg~--i~iWd~~~ 259 (304)
T 2ynn_A 243 IISGSEDGT--LKIWNSST 259 (304)
T ss_dssp EEEEETTSC--EEEEETTT
T ss_pred EEEEcCCCe--EEEEECCC
Confidence 788876553 56778766
No 172
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.37 E-value=0.76 Score=45.46 Aligned_cols=104 Identities=15% Similarity=0.139 Sum_probs=56.0
Q ss_pred EEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCcc---ceEEEEE--C-CEEEEEecCCCCceeEEEEeCCCCCeE
Q 014222 218 LYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMV---PFIGVVY--E-GKWFLKGLGSHRQVLSEAYQPETDSWF 291 (428)
Q Consensus 218 iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~---~~~~~~~--~-g~lyv~Gg~~~~~~~i~~yd~~~~~W~ 291 (428)
+++.|+.+ ..+.+||..+.+-... +..... ....+.+ + +.+++.|+.. ..+..||..+.+-.
T Consensus 175 ~l~~~~~d-------~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 175 RSMTVGDD-------GSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSD---RKISCFDGKSGEFL 242 (615)
T ss_dssp EEEEEETT-------TEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETT---CCEEEEETTTCCEE
T ss_pred EEEEEeCC-------CcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCC---CeEEEEECCCCCEe
Confidence 66666653 5889999876543221 111111 2222222 4 6666666543 24678998877644
Q ss_pred ecC-CCC-cCCCCCceEEE-CCeEEEEEccCCcEEEEEeCCCCcee
Q 014222 292 PVY-DGM-VAGWRNPSASL-NRHLYALDCKDGCKIRVYDEVTDSWS 334 (428)
Q Consensus 292 ~~~-~~~-~~~~~~~~~~~-~~~lyv~gG~~~~~i~~yd~~~~~W~ 334 (428)
..- ... ........+.+ ++.+++.++.++ .+.+||..+.+-.
T Consensus 243 ~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 243 KYIEDDQEPVQGGIFALSWLDSQKFATVGADA-TIRVWDVTTSKCV 287 (615)
T ss_dssp EECCBTTBCCCSCEEEEEESSSSEEEEEETTS-EEEEEETTTTEEE
T ss_pred EEecccccccCCceEEEEEcCCCEEEEEcCCC-cEEEEECCCCcEE
Confidence 332 100 11111112222 777778877664 8999999876543
No 173
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.37 E-value=2.8 Score=42.63 Aligned_cols=252 Identities=9% Similarity=0.008 Sum_probs=128.0
Q ss_pred cceEEEEeeCCC-CceeEEEEeCCCCceEeCCCCCC---CCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCC
Q 014222 118 EEWIYVIKRDRE-GKISWHAFDPIYQLWQPLPPIPK---EYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSART 193 (428)
Q Consensus 118 ~~~l~v~gg~~~-~~~~~~~yd~~~~~W~~l~~~~~---~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t 193 (428)
++++|....+.. ....+++.+...+.|..+..... .. .....+.+...+++.+++...... .....++++|..+
T Consensus 79 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~-~~~~~~~~~SPDG~~la~~~~~~G-~~~~~i~v~dl~t 156 (695)
T 2bkl_A 79 NGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDG-TVSLGTWAVSWDGKKVAFAQKPNA-ADEAVLHVIDVDS 156 (695)
T ss_dssp TTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSS-CEEEEEEEECTTSSEEEEEEEETT-CSCCEEEEEETTT
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCC-CEEEEEEEECCCCCEEEEEECCCC-CceEEEEEEECCC
Confidence 556666554332 23567888877777877643221 10 001112223323245554432211 1245899999999
Q ss_pred CceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCC------CCCCCeEEEEeCCCCceE--EcCCCCCC-ccceE-EEE
Q 014222 194 NKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGV------HRSLRSAEVYDPNKNRWS--FISDMSTA-MVPFI-GVV 262 (428)
Q Consensus 194 ~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~------~~~~~~v~~yd~~t~~W~--~~~~~p~~-~~~~~-~~~ 262 (428)
++......+..... ...+. -+|+.++++..+... ......++.++..+..-. .+...+.. ..... ...
T Consensus 157 g~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 157 GEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp CCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred CCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 88652112221111 22222 256555555443210 012356899998887632 33222221 11112 222
Q ss_pred ECCEEEEEecCCC-CceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccC--CcEEEEEeCCCCc---eeeC
Q 014222 263 YEGKWFLKGLGSH-RQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKD--GCKIRVYDEVTDS---WSKH 336 (428)
Q Consensus 263 ~~g~lyv~Gg~~~-~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~--~~~i~~yd~~~~~---W~~v 336 (428)
-+|+..++..... ....++.+|..+..|..+..... .. ...+..+|.||+....+ ...|+.+|.++.. |+.+
T Consensus 236 pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-~~-~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l 313 (695)
T 2bkl_A 236 RDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG-AK-YEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEI 313 (695)
T ss_dssp TTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS-CC-EEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEE
T ss_pred CCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC-ce-EEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEE
Confidence 3666444433222 33457777877778887764222 11 12223466666665432 3589999987754 7776
Q ss_pred cccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 337 IDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
..-... .. -..+...+++|++.........++++++..
T Consensus 314 ~~~~~~--~~----l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 314 VPEDSS--AS----LLSVSIVGGHLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp ECCCSS--CE----EEEEEEETTEEEEEEEETTEEEEEEEETTC
T ss_pred ecCCCC--Ce----EEEEEEECCEEEEEEEECCEEEEEEEeCCC
Confidence 431101 11 122333488998887777777888888754
No 174
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.33 E-value=2.8 Score=42.50 Aligned_cols=117 Identities=20% Similarity=0.249 Sum_probs=68.3
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCc--eEeCCCCCCCCc-----cccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEE
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQL--WQPLPPIPKEYS-----EALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYS 190 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~--W~~l~~~~~~~~-----~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd 190 (428)
++.||+... ...++++|..+++ |+.-...+.... .....+.++.++ +||+... ...++.+|
T Consensus 66 ~g~vyv~~~----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~v~~~-------dg~l~alD 133 (668)
T 1kv9_A 66 DGVIYTSMS----WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGD-KVYVGTL-------DGRLIALD 133 (668)
T ss_dssp TTEEEEEEG----GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBT-EEEEECT-------TSEEEEEE
T ss_pred CCEEEEECC----CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECC-EEEEEcC-------CCEEEEEE
Confidence 778888764 2368899988876 876443221100 001223455666 7887531 24789999
Q ss_pred CCCCc--eeeCCCCC--cCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCC--ceEEc
Q 014222 191 ARTNK--WHRAPDML--RRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWSFI 248 (428)
Q Consensus 191 ~~t~~--W~~~~~~~--~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~ 248 (428)
..|.+ |+.-..-+ ......+.++.++++|+..+..+ ......+..||..|. .|+.-
T Consensus 134 ~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~--~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 134 AKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAE--YGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp TTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTT--TCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCC--cCCCCEEEEEECCCCcEEEEec
Confidence 98885 87533211 11222345667899888543211 122357999999876 48753
No 175
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.32 E-value=1.4 Score=45.48 Aligned_cols=214 Identities=7% Similarity=-0.013 Sum_probs=105.3
Q ss_pred eEEEEeCCCCceEeCCCCC--CCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCC------Ccee---e---
Q 014222 133 SWHAFDPIYQLWQPLPPIP--KEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSART------NKWH---R--- 198 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~--~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t------~~W~---~--- 198 (428)
-+.+||+.++++....... .......-+++....++.|++. ... .-+++||+.+ ..+. .
T Consensus 393 GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig-T~~------~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 465 (758)
T 3ott_A 393 SINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIS-TCL------GGIFVVDKHKLMQSTSGQYIAEQNYSV 465 (758)
T ss_dssp EEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEE-ESS------SCEEEEEHHHHHHCCSSEEECSEEECG
T ss_pred cHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEE-ECC------CceEEEccccccccCCcceeccccccc
Confidence 5788999999887653211 1000111233333333367763 221 1367787653 1221 0
Q ss_pred CCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCC-ccceEEEEE--CCEEEEEecCC
Q 014222 199 APDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTA-MVPFIGVVY--EGKWFLKGLGS 274 (428)
Q Consensus 199 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~-~~~~~~~~~--~g~lyv~Gg~~ 274 (428)
...++... -.+... -+|.|++.+|.. .-+.+||+.+++++.+..-... ......... +|.|++...
T Consensus 466 ~~~l~~~~-i~~i~~d~~g~lWi~~~t~-------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~-- 535 (758)
T 3ott_A 466 HNGLSGMF-INQIIPDNEGNVWVLLYNN-------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFH-- 535 (758)
T ss_dssp GGTCSCSC-EEEEEECTTSCEEEEETTC-------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEET--
T ss_pred ccccccce-eeeEEEcCCCCEEEEccCC-------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEec--
Confidence 01111111 111222 246788866643 3588999999998876421111 111222222 678887531
Q ss_pred CCceeEEEEeCCCCCeEecCC-CCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceE
Q 014222 275 HRQVLSEAYQPETDSWFPVYD-GMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAA 353 (428)
Q Consensus 275 ~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~ 353 (428)
.-+.+||+.+++++.... ..+.....+.+.-+|.|++... +.+..||+++.+..... ++.. .. ..+
T Consensus 536 ---~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~~g~lWi~t~---~Gl~~~~~~~~~~~~~~-~~~~--~~----~~~ 602 (758)
T 3ott_A 536 ---GGVMRINPKDESQQSISFGSFSNNEILSMTCVKNSIWVSTT---NGLWIIDRKTMDARQQN-MTNK--RF----TSL 602 (758)
T ss_dssp ---TEEEEECC--CCCCBCCCCC---CCEEEEEEETTEEEEEES---SCEEEEETTTCCEEEC---CCC--CC----SEE
T ss_pred ---CceEEEecCCCceEEecccCCCccceEEEEECCCCEEEECC---CCeEEEcCCCceeEEec-CCCC--ce----eee
Confidence 137899999988776531 1111111122334788888762 35999999998876543 2211 11 122
Q ss_pred EEE-eCCeEEEEeCCCeEEEEEeecCCC
Q 014222 354 LVP-LNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 354 ~~~-~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+.. -+|.||+ ||..+. ..++|..
T Consensus 603 ~~~~~~G~l~f-G~~~Gl---~~f~p~~ 626 (758)
T 3ott_A 603 LFDPKEDCVYL-GGADGF---GISHSNL 626 (758)
T ss_dssp EEETTTTEEEE-ECBSEE---EEEEC--
T ss_pred EEECCCCcEEE-ecCCce---EEEChhh
Confidence 333 3566665 665553 3566654
No 176
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.32 E-value=0.27 Score=53.86 Aligned_cols=218 Identities=7% Similarity=-0.023 Sum_probs=104.8
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++......-.. ..-.+++...+++.++.|+.+ ..+.+||..++....+.... ..-..++
T Consensus 984 ~i~i~d~~~~~~~~~~~~h~----~~v~~l~~s~dg~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~--~~v~~~~ 1051 (1249)
T 3sfz_A 984 AIKIIELPNNRVFSSGVGHK----KAVRHIQFTADGKTLISSSED------SVIQVWNWQTGDYVFLQAHQ--ETVKDFR 1051 (1249)
T ss_dssp CCEEEETTTTSCEEECCCCS----SCCCCEEECSSSSCEEEECSS------SBEEEEETTTTEEECCBCCS--SCEEEEE
T ss_pred CEEEEEcCCCceeeecccCC----CceEEEEECCCCCEEEEEcCC------CEEEEEECCCCceEEEecCC--CcEEEEE
Confidence 56677776655322111111 112234443333566666654 36889999888766443221 1112233
Q ss_pred EECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEe
Q 014222 213 VINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFP 292 (428)
Q Consensus 213 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~ 292 (428)
...+..++.|+.+ ..+.+||..+.+-...-..........+..-++++++.|+.+. .+..||..+.+-
T Consensus 1052 ~~~~~~l~~~~~d-------g~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~---~v~iwd~~~~~~-- 1119 (1249)
T 3sfz_A 1052 LLQDSRLLSWSFD-------GTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK---TAKIWSFDLLSP-- 1119 (1249)
T ss_dssp ECSSSEEEEEESS-------SEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS---CCCEECSSSSSC--
T ss_pred EcCCCcEEEEECC-------CcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC---cEEEEECCCcce--
Confidence 3333334555543 4789999887653221111111112222333666666665432 356788765541
Q ss_pred cCCCCcCCCC-CceEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCc-ccccc--cCCcccccceEEEEeCCeEEEEeC
Q 014222 293 VYDGMVAGWR-NPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHI-DSKMH--LGNSRALEAAALVPLNGKLCIIRN 366 (428)
Q Consensus 293 ~~~~~~~~~~-~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~-~~~~~--~~~~~~~~~~~~~~~~~~lyv~GG 366 (428)
+.. ...... ..++. -++++.+.|+.++ .|.+||..+.+-.... ..... ...............++++++.+|
T Consensus 1120 ~~~-l~~h~~~v~~~~~s~dg~~lat~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~ 1197 (1249)
T 3sfz_A 1120 LHE-LKGHNGCVRCSAFSLDGILLATGDDNG-EIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG 1197 (1249)
T ss_dssp SBC-CCCCSSCEEEEEECSSSSEEEEEETTS-CCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES
T ss_pred eee-eccCCCcEEEEEECCCCCEEEEEeCCC-EEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC
Confidence 111 111111 11222 3677888887665 6889998876533221 00000 000000012334455666666665
Q ss_pred CCeEEEEEeecCCC
Q 014222 367 NMSISLVDVSKSNG 380 (428)
Q Consensus 367 ~~~~~~v~~yd~~~ 380 (428)
..+.+||..+
T Consensus 1198 ----g~v~vwd~~~ 1207 (1249)
T 3sfz_A 1198 ----GYLKWWNVAT 1207 (1249)
T ss_dssp ----SSEEEBCSSS
T ss_pred ----CeEEEEECCC
Confidence 2477899877
No 177
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.30 E-value=0.52 Score=44.36 Aligned_cols=173 Identities=8% Similarity=-0.021 Sum_probs=94.4
Q ss_pred eEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE
Q 014222 185 RVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV 262 (428)
Q Consensus 185 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~ 262 (428)
.+.++++.......+..- .....+++.. ++.||+.--. ...+.++++.....+.+........ ...++
T Consensus 97 ~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~~-------~~~I~r~~~~g~~~~~~~~~~~~~p-~glav 166 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVT-------LDRILRANLNGSNVEEVVSTGLESP-GGLAV 166 (386)
T ss_dssp CEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCCEEEEECSSCSCC-CCEEE
T ss_pred cceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeCC-------CCcEEEEecCCCCcEEEEeCCCCCc-cEEEE
Confidence 577778776655543221 1222334433 5899998432 3689999998876655422111111 12232
Q ss_pred --ECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCc--eEEE--CCeEEEEEccCCcEEEEEeCCCCceeeC
Q 014222 263 --YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNP--SASL--NRHLYALDCKDGCKIRVYDEVTDSWSKH 336 (428)
Q Consensus 263 --~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~--~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v 336 (428)
.++.||+.-.. ...++++++....-+.+.. .....+ .++- ++.||+........|++++++...-..+
T Consensus 167 d~~~g~lY~~d~~---~~~I~~~~~dg~~~~~l~~---~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 240 (386)
T 3v65_B 167 DWVHDKLYWTDSG---TSRIEVANLDGAHRKVLLW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 240 (386)
T ss_dssp ETTTTEEEEEETT---TTEEEECBTTSCSCEEEEC---SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred EeCCCeEEEEcCC---CCeEEEEeCCCCceEEeec---CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 47899998532 2257788876554333321 111122 2333 6889999754446899999987544443
Q ss_pred cccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 337 IDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.... ...+ .+.++-..+++||+.-... ..|+++|.+.
T Consensus 241 ~~~~--~~~P---nGlavd~~~~~lY~aD~~~--~~I~~~d~dG 277 (386)
T 3v65_B 241 ADTH--LFWP---NGLTIDYAGRRMYWVDAKH--HVIERANLDG 277 (386)
T ss_dssp ECSS--CSCE---EEEEEEGGGTEEEEEETTT--TEEEEECTTS
T ss_pred EECC--CCCe---eeEEEeCCCCEEEEEECCC--CEEEEEeCCC
Confidence 2211 1111 1122222578999985432 3577777765
No 178
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.30 E-value=2.6 Score=41.87 Aligned_cols=118 Identities=14% Similarity=0.154 Sum_probs=67.7
Q ss_pred cceEEEEeeCCCCceeEEEEeC-CCCc--eEeCCCCCCCCc-----cccccEEEEEeCCEEEEEeeeCCCCCCCceEEEE
Q 014222 118 EEWIYVIKRDREGKISWHAFDP-IYQL--WQPLPPIPKEYS-----EALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFY 189 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~-~~~~--W~~l~~~~~~~~-----~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~y 189 (428)
++.||+.... ...++++|. .+++ |+.-........ .....+.++.++ +||+... ...++.+
T Consensus 62 ~g~vyv~~~~---~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~v~~~-------dg~l~al 130 (571)
T 2ad6_A 62 GDMMYVHSAF---PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAG-QIVKKQA-------NGHLLAL 130 (571)
T ss_dssp TTEEEEECST---TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETT-EEEEECT-------TSEEEEE
T ss_pred CCEEEEEeCC---CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECC-EEEEEeC-------CCEEEEE
Confidence 7788887631 236899999 7775 876433221100 001223455566 7887632 2378999
Q ss_pred ECCCCc--eeeC-CCCCcC-CcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCC--ceEEc
Q 014222 190 SARTNK--WHRA-PDMLRR-RHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWSFI 248 (428)
Q Consensus 190 d~~t~~--W~~~-~~~~~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~ 248 (428)
|..|++ |+.- ...... ....+.++.++++|+..+..+ ......+..||+.|. .|+.-
T Consensus 131 D~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~--~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 131 DAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAE--LGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp ETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGG--GTCCCEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCc--cCCCCEEEEEECCCCcEEEEEc
Confidence 998884 8743 221111 122234567899988654211 112358999999875 58654
No 179
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.28 E-value=0.82 Score=42.30 Aligned_cols=173 Identities=9% Similarity=0.007 Sum_probs=94.3
Q ss_pred eEEEEECCCCceeeCCCCCcCCcceeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE
Q 014222 185 RVIFYSARTNKWHRAPDMLRRRHFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV 262 (428)
Q Consensus 185 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~ 262 (428)
.+.++++.......+.+- .....+++. .++.||+.--. ...+.++++....-+.+....... ....++
T Consensus 54 ~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~~-------~~~I~r~~~~g~~~~~~~~~~~~~-p~glav 123 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVT-------LDRILRANLNGSNVEEVVSTGLES-PGGLAV 123 (349)
T ss_dssp CEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCSC-CCEEEE
T ss_pred ceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEecc-------CCceEEEecCCCCceEEEeCCCCC-ccEEEE
Confidence 577777777665544221 112233333 35899997432 368999999877655442211111 122333
Q ss_pred --ECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCc--eEEE--CCeEEEEEccCCcEEEEEeCCCCceeeC
Q 014222 263 --YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNP--SASL--NRHLYALDCKDGCKIRVYDEVTDSWSKH 336 (428)
Q Consensus 263 --~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~--~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v 336 (428)
.++.||+.-.. ...|+++++....-+.+.. .....+ .++- ++.||+........|++++++...-+.+
T Consensus 124 d~~~g~ly~~d~~---~~~I~~~~~dG~~~~~l~~---~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 197 (349)
T 3v64_C 124 DWVHDKLYWTDSG---TSRIEVANLDGAHRKVLLW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 197 (349)
T ss_dssp ETTTTEEEEEETT---TTEEEEEETTSCSCEEEEC---TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES
T ss_pred ecCCCeEEEEcCC---CCeEEEEcCCCCceEEEEe---CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 47899998532 2357888887654333321 111122 3333 6899999754436899999987654444
Q ss_pred cccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 337 IDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
... ....+ .+.++-..+++||+.-... ..|+.+|++.
T Consensus 198 ~~~--~~~~P---nGla~d~~~~~lY~aD~~~--~~I~~~~~dG 234 (349)
T 3v64_C 198 ADT--HLFWP---NGLTIDYAGRRMYWVDAKH--HVIERANLDG 234 (349)
T ss_dssp CCS--SCSCE---EEEEEETTTTEEEEEETTT--TEEEEEETTS
T ss_pred EEC--CCCCc---ceEEEeCCCCEEEEEECCC--CEEEEEeCCC
Confidence 221 11112 1122222478999985432 3567777655
No 180
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.18 E-value=0.41 Score=42.94 Aligned_cols=184 Identities=11% Similarity=0.035 Sum_probs=94.3
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEE
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF 247 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~ 247 (428)
.+|+..-. ...+++||+.++....... + ..-.+++. -++++|+.. . ..+.+||+.+.+++.
T Consensus 26 ~l~~~d~~------~~~i~~~d~~~~~~~~~~~-~--~~~~~i~~~~dG~l~v~~--~-------~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 26 SLLFVDIP------AKKVCRWDSFTKQVQRVTM-D--APVSSVALRQSGGYVATI--G-------TKFCALNWKEQSAVV 87 (297)
T ss_dssp EEEEEETT------TTEEEEEETTTCCEEEEEC-S--SCEEEEEEBTTSSEEEEE--T-------TEEEEEETTTTEEEE
T ss_pred EEEEEECC------CCEEEEEECCCCcEEEEeC-C--CceEEEEECCCCCEEEEE--C-------CeEEEEECCCCcEEE
Confidence 78887532 3478999999876543321 1 11112222 256666642 1 478999999998877
Q ss_pred cCCCCCC----ccceEEEEECCEEEEEecCC--------CCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE-CC-eEE
Q 014222 248 ISDMSTA----MVPFIGVVYEGKWFLKGLGS--------HRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL-NR-HLY 313 (428)
Q Consensus 248 ~~~~p~~----~~~~~~~~~~g~lyv~Gg~~--------~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~ly 313 (428)
+...... +....++.-+|++|+..... .....++.+|+. .+...+.... ......+.. ++ .||
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~--~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQV--DISNGLDWSLDHKIFY 164 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEE--SBEEEEEECTTSCEEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeecc--ccccceEEcCCCCEEE
Confidence 6543221 11112222378888853211 123457888875 3333332111 001112222 34 588
Q ss_pred EEEccCCcEEEEEeC--CCCceee---CcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 314 ALDCKDGCKIRVYDE--VTDSWSK---HIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 314 v~gG~~~~~i~~yd~--~~~~W~~---v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+..... ..|++||. ++..... +..++.....+ ...++..+|.||+..... ..|.+||+++
T Consensus 165 v~~~~~-~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p----~g~~~d~~G~lwva~~~~--~~v~~~d~~t 229 (297)
T 3g4e_A 165 YIDSLS-YSVDAFDYDLQTGQISNRRSVYKLEKEEQIP----DGMCIDAEGKLWVACYNG--GRVIRLDPVT 229 (297)
T ss_dssp EEEGGG-TEEEEEEECTTTCCEEEEEEEEECCGGGCEE----EEEEEBTTSCEEEEEETT--TEEEEECTTT
T ss_pred EecCCC-CcEEEEeccCCCCcccCcEEEEECCCCCCCC----CeeEECCCCCEEEEEcCC--CEEEEEcCCC
Confidence 887543 47888875 4544321 11111111111 122334467899875322 2478899986
No 181
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.18 E-value=0.41 Score=44.91 Aligned_cols=150 Identities=11% Similarity=0.157 Sum_probs=74.4
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE-CCEEEEEccccCCCCCCCCeEEEEeC
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVYDP 240 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~ 240 (428)
++...+++.++.|+.++ .+.+||..+.+-...-.-.. ..-.+++.. ++..++.|+.+ ..+.+||.
T Consensus 129 v~~s~dg~~l~s~~~d~------~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~d-------~~v~iwd~ 194 (393)
T 1erj_A 129 VCFSPDGKFLATGAEDR------LIRIWDIENRKIVMILQGHE-QDIYSLDYFPSGDKLVSGSGD-------RTVRIWDL 194 (393)
T ss_dssp EEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETT-------SEEEEEET
T ss_pred EEECCCCCEEEEEcCCC------eEEEEECCCCcEEEEEccCC-CCEEEEEEcCCCCEEEEecCC-------CcEEEEEC
Confidence 33333335777776542 58899988775432211111 111122222 45555666653 57899999
Q ss_pred CCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEec-CCCCc--CCCCCc--eEEE--CCe
Q 014222 241 NKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPV-YDGMV--AGWRNP--SASL--NRH 311 (428)
Q Consensus 241 ~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~-~~~~~--~~~~~~--~~~~--~~~ 311 (428)
.+.+....-..... ...++.. ++++++.|+.+. .+..||..+..-... ..... ...... .+.+ +++
T Consensus 195 ~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~s~d~---~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~ 269 (393)
T 1erj_A 195 RTGQCSLTLSIEDG--VTTVAVSPGDGKYIAAGSLDR---AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ 269 (393)
T ss_dssp TTTEEEEEEECSSC--EEEEEECSTTCCEEEEEETTS---CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS
T ss_pred CCCeeEEEEEcCCC--cEEEEEECCCCCEEEEEcCCC---cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCC
Confidence 88765432221111 1122222 567777766432 367889887654322 11111 111111 2222 577
Q ss_pred EEEEEccCCcEEEEEeCCCC
Q 014222 312 LYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 312 lyv~gG~~~~~i~~yd~~~~ 331 (428)
+++.|+.++ .|.+||..+.
T Consensus 270 ~l~s~s~d~-~v~~wd~~~~ 288 (393)
T 1erj_A 270 SVVSGSLDR-SVKLWNLQNA 288 (393)
T ss_dssp EEEEEETTS-EEEEEEC---
T ss_pred EEEEEeCCC-EEEEEECCCC
Confidence 777777664 7899988654
No 182
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.12 E-value=1.6 Score=38.28 Aligned_cols=191 Identities=12% Similarity=0.018 Sum_probs=101.6
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCce
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKW 196 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 196 (428)
++.||+... ....+.+||+....-..+..... ..-+++++. .+++||+... ....+.++++....-
T Consensus 47 ~~~ly~~d~---~~~~I~~~~~~g~~~~~~~~~~~----~~p~~ia~d~~~~~lyv~d~------~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 47 DKVVYWTDI---SEPSIGRASLHGGEPTTIIRQDL----GSPEGIALDHLGRTIFWTDS------QLDRIEVAKMDGTQR 113 (267)
T ss_dssp TTEEEEEET---TTTEEEEEESSSCCCEEEECTTC----CCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSC
T ss_pred CCEEEEEEC---CCCEEEEEecCCCCcEEEEECCC----CCccEEEEEecCCeEEEEEC------CCCEEEEEEcCCCCE
Confidence 467777652 23478889987664333221111 122455554 2348998843 234788999865433
Q ss_pred eeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEec
Q 014222 197 HRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGL 272 (428)
Q Consensus 197 ~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg 272 (428)
+.+..... ..-..+++. +++||+..... ....++++++....-+.+..... ......+.- ++.||+...
T Consensus 114 ~~~~~~~~-~~P~~i~vd~~~g~lyv~~~~~-----~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 114 RVLFDTGL-VNPRGIVTDPVRGNLYWTDWNR-----DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp EEEECSSC-SSEEEEEEETTTTEEEEEECCS-----SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCC-CCccEEEEeeCCCEEEEEECCC-----CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEEC
Confidence 32211111 111234443 68999975321 13578888886544333321111 112223332 578999853
Q ss_pred CCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCcee
Q 014222 273 GSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWS 334 (428)
Q Consensus 273 ~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~ 334 (428)
. ...+.+||+....-..+.... ..-...++-++.||+....+ ..|.++|+++.+-.
T Consensus 187 ~---~~~I~~~~~~g~~~~~~~~~~--~~P~gi~~d~~~lyva~~~~-~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 187 G---THRAECLNPAQPGRRKVLEGL--QYPFAVTSYGKNLYYTDWKT-NSVIAMDLAISKEM 242 (267)
T ss_dssp T---TTEEEEEETTEEEEEEEEECC--CSEEEEEEETTEEEEEETTT-TEEEEEETTTTEEE
T ss_pred C---CCEEEEEecCCCceEEEecCC--CCceEEEEeCCEEEEEECCC-CeEEEEeCCCCCce
Confidence 2 235789998754322221111 11112445688999987543 58999999876543
No 183
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.09 E-value=0.9 Score=46.46 Aligned_cols=99 Identities=7% Similarity=-0.105 Sum_probs=51.5
Q ss_pred eEEEEeCCC-CCeEecCCCCcCCCC--CceEEECCe-EEEEEcc---CCcEEEEEeCCCCceeeCcccccccCCcccccc
Q 014222 279 LSEAYQPET-DSWFPVYDGMVAGWR--NPSASLNRH-LYALDCK---DGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEA 351 (428)
Q Consensus 279 ~i~~yd~~~-~~W~~~~~~~~~~~~--~~~~~~~~~-lyv~gG~---~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~ 351 (428)
.++.+|..+ .+-..+......... .... -+|+ |++.... ....|+++|.++.+...+...... .... ...
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~-~~~ 340 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSP-TWVP-LHN 340 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECS-SCCC-CCS
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCC-CcCC-cCC
Confidence 578889887 765544321011111 1122 3444 4444321 224799999998877665432111 0000 001
Q ss_pred eEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 352 AALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 352 ~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
......++++++.++..+...++.+|...
T Consensus 341 ~~~~spdg~~~~~~~~~g~~~l~~~~~~~ 369 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERTGFQHLYRIDSKG 369 (741)
T ss_dssp CCEECTTSCEEEEECTTSSCEEEEECSSS
T ss_pred ceEECCCCeEEEEecCCCccEEEEEcCCC
Confidence 23344567777777766666788888665
No 184
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.07 E-value=3.6 Score=42.19 Aligned_cols=232 Identities=9% Similarity=-0.100 Sum_probs=118.0
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCC--------CCCCceEEEEECCCCcee--eCCC
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPL--------KGSMRRVIFYSARTNKWH--RAPD 201 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~--------~~~~~~v~~yd~~t~~W~--~~~~ 201 (428)
..++++|..+++..... .+. ....+.+...+..|+.. ..+.. ......+++++..|..-. .+..
T Consensus 189 ~~i~v~dl~tg~~~~~~-~~~----~~~~~~~wspD~~l~~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~ 262 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADE-LKW----VKFSGLAWLGNDALLYS-RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA 262 (741)
T ss_dssp EEEEEEETTTCCEEEEE-EEE----EESCCCEESTTSEEEEE-ECCCC--------CCCCCEEEEEETTSCGGGCEEEEC
T ss_pred EEEEEEECCCCCCCCcc-CCC----ceeccEEEECCCEEEEE-EecCcccccccccCCCCCEEEEEECCCCchhCEEEec
Confidence 57899999998875431 110 00012222223234443 32221 012456888888776521 1111
Q ss_pred CC-cCCcceeeE-EECCEEEEEccccCCCCCCCCeEEEEeCCCC--c-eEEcCCCCCCccceEEEEECCEEEEEecCCCC
Q 014222 202 ML-RRRHFFGSC-VINNCLYVAGGENGGVHRSLRSAEVYDPNKN--R-WSFISDMSTAMVPFIGVVYEGKWFLKGLGSHR 276 (428)
Q Consensus 202 ~~-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~-W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~ 276 (428)
.+ .+....... .-+|+..++..... ......++++|..+. . |..+.......... ...-++.||+.......
T Consensus 263 ~~~~~~~~~~~~~SpDG~~l~~~~~~~--~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~ 339 (741)
T 1yr2_A 263 TPELPKRGHGASVSSDGRWVVITSSEG--TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAP 339 (741)
T ss_dssp CTTCTTCEEEEEECTTSCEEEEEEECT--TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCT
T ss_pred cCCCCeEEEEEEECCCCCEEEEEEEcc--CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCC
Confidence 11 111122222 23554333333221 112468999999877 6 87775433322222 23457778877644333
Q ss_pred ceeEEEEeCCC--CCeEecCCCCcCCCCCceEEECCeEEEEEccCC-cEEEEEeCCCCceeeCcccccccCCcccccceE
Q 014222 277 QVLSEAYQPET--DSWFPVYDGMVAGWRNPSASLNRHLYALDCKDG-CKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAA 353 (428)
Q Consensus 277 ~~~i~~yd~~~--~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~-~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~ 353 (428)
...++.+|..+ ..|+.+.+.... .-......++.|++....++ ..++++|...+.-..+.. +. .+.. ..
T Consensus 340 ~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~-~~~v-----~~ 411 (741)
T 1yr2_A 340 LKKIVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-PG-IGSA-----SG 411 (741)
T ss_dssp TCEEEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBC-SS-SCEE-----EE
T ss_pred CCEEEEEeCCCCccccEEEecCCCC-eEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccC-CC-CeEE-----EE
Confidence 55688999887 579887542211 11122345888888876554 468999986554444321 11 1100 11
Q ss_pred E-EEeC-CeEEE-EeCCCeEEEEEeecCCC
Q 014222 354 L-VPLN-GKLCI-IRNNMSISLVDVSKSNG 380 (428)
Q Consensus 354 ~-~~~~-~~lyv-~GG~~~~~~v~~yd~~~ 380 (428)
+ ...+ +.|++ ..+......++.||..+
T Consensus 412 ~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 412 LSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred eecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 1 1123 34544 34455667899999888
No 185
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.04 E-value=0.53 Score=44.54 Aligned_cols=178 Identities=11% Similarity=0.099 Sum_probs=89.3
Q ss_pred eEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE
Q 014222 185 RVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV 262 (428)
Q Consensus 185 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~ 262 (428)
.|.++|..|++...+-.+........++.+ +++.++.|+.+ ..+.+||..+.+-...-. ..........
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-------g~v~iWd~~~~~~~~~~~--~h~~~v~~~s 196 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-------AEVQLWDVQQQKRLRNMT--SHSARVGSLS 196 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEEC--CCSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-------CeEEEEEcCCCcEEEEEe--CCCCceEEEe
Confidence 799999999887665443332222222222 56777777764 578999998875432211 1112233445
Q ss_pred ECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCc-eE--EECCeEEEEEccCCcEEEEEeCCCCc--eeeCc
Q 014222 263 YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNP-SA--SLNRHLYALDCKDGCKIRVYDEVTDS--WSKHI 337 (428)
Q Consensus 263 ~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~--~~~~~lyv~gG~~~~~i~~yd~~~~~--W~~v~ 337 (428)
.++.+.+.|+.. ..+..+|.......... ........ .. .-++...+.++.++ .+.++|..+.+ +..+.
T Consensus 197 ~~~~~l~sgs~d---~~i~~~d~~~~~~~~~~--~~~h~~~~~~~~~~~~g~~l~s~~~D~-~v~i~~~~~~~~~~~~~~ 270 (420)
T 4gga_A 197 WNSYILSSGSRS---GHIHHHDVRVAEHHVAT--LSGHSQEVCGLRWAPDGRHLASGGNDN-LVNVWPSAPGEGGWVPLQ 270 (420)
T ss_dssp EETTEEEEEETT---SEEEEEETTSSSCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS-CEEEEESSCCSSCSCCSE
T ss_pred eCCCEEEEEeCC---CceeEeeecccceeeEE--ecccccceeeeeecCCCCeeeeeeccc-cceEEeeccccccceeee
Confidence 577766666543 23567776654432211 11111111 11 22566667776654 78888876543 22222
Q ss_pred ccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 338 DSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
......... ...+....+..++++++......|.+||..+
T Consensus 271 ~~~~~~~~V---~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t 310 (420)
T 4gga_A 271 TFTQHQGAV---KAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 310 (420)
T ss_dssp EECCCSSCE---EEEEECTTCTTEEEEEECTTTCEEEEEETTT
T ss_pred eecccCCce---eeeeeCCCcccEEEEEeecCCCEEEEEeCCc
Confidence 211111111 0112222345566655433333467778766
No 186
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.02 E-value=0.25 Score=44.98 Aligned_cols=147 Identities=10% Similarity=-0.042 Sum_probs=74.4
Q ss_pred ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE-ECC-EEEEEecCCCCceeEEEEeCCCCCeE
Q 014222 214 INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV-YEG-KWFLKGLGSHRQVLSEAYQPETDSWF 291 (428)
Q Consensus 214 ~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~g-~lyv~Gg~~~~~~~i~~yd~~~~~W~ 291 (428)
.++++|+.++.+ ..+.++|+.+.+....-..+........+. -+| .+|+.+.. ...+..||+.+++-.
T Consensus 9 ~~~~~~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 9 AGHEYMIVTNYP-------NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGDIYGIDLDTCKNT 78 (349)
T ss_dssp TTCEEEEEEETT-------TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTEEEEEETTTTEEE
T ss_pred CCCEEEEEeCCC-------CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---CCcEEEEeCCCCcEE
Confidence 357788887653 689999999886543222222101222222 345 57777532 234789999887654
Q ss_pred ecCCCCcC----CCCCceEEE--CCe-EEEEEcc----------CCcEEEEEeCCCCceeeC-cccccccCCcccccceE
Q 014222 292 PVYDGMVA----GWRNPSASL--NRH-LYALDCK----------DGCKIRVYDEVTDSWSKH-IDSKMHLGNSRALEAAA 353 (428)
Q Consensus 292 ~~~~~~~~----~~~~~~~~~--~~~-lyv~gG~----------~~~~i~~yd~~~~~W~~v-~~~~~~~~~~~~~~~~~ 353 (428)
........ ......+.+ +++ ||+.+.. ....|++||+++++-.+. .....+. .. ...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~----~~~ 153 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-QV----YLM 153 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-SC----CCE
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-cc----cce
Confidence 32111110 011112222 454 5554421 135899999987542221 1111111 11 122
Q ss_pred EEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 354 LVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 354 ~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
....++++|+.++. +.++|+.+
T Consensus 154 ~~s~dg~l~~~~~~-----i~~~d~~~ 175 (349)
T 1jmx_B 154 RAADDGSLYVAGPD-----IYKMDVKT 175 (349)
T ss_dssp EECTTSCEEEESSS-----EEEECTTT
T ss_pred eECCCCcEEEccCc-----EEEEeCCC
Confidence 34456677775432 77888876
No 187
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=95.02 E-value=1.8 Score=42.85 Aligned_cols=216 Identities=13% Similarity=0.030 Sum_probs=109.8
Q ss_pred ceeEEEEeC--CCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcc
Q 014222 131 KISWHAFDP--IYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHF 208 (428)
Q Consensus 131 ~~~~~~yd~--~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~ 208 (428)
...++..+. .... ..+...... .....+.++..++++.+..+ .+.+||..+++-+.+...+. .
T Consensus 89 ~~~l~~~~~~~~g~~-~~l~~~~~~-----~~~~~s~dg~~~~~~s~~~~------~~~l~d~~~g~~~~l~~~~~--~- 153 (582)
T 3o4h_A 89 QHALFKVNTSRPGEE-QRLEAVKPM-----RILSGVDTGEAVVFTGATED------RVALYALDGGGLRELARLPG--F- 153 (582)
T ss_dssp CEEEEEEETTSTTCC-EECTTSCSB-----EEEEEEECSSCEEEEEECSS------CEEEEEEETTEEEEEEEESS--C-
T ss_pred ceEEEEEeccCCCcc-ccccCCCCc-----eeeeeCCCCCeEEEEecCCC------CceEEEccCCcEEEeecCCC--c-
Confidence 346667776 4332 244332221 12233344434555544321 34478988887666643332 2
Q ss_pred eeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCC
Q 014222 209 FGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETD 288 (428)
Q Consensus 209 ~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~ 288 (428)
.....-+|+..+.++.+.+ ....++.+|..+.+++.+....... ...+..-+|+..+.+ .......++.+|..++
T Consensus 154 ~~~~spDG~~la~~~~~~~---~~~~i~~~d~~~g~~~~l~~~~~~~-~~~~~SpDG~~l~~~-~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 154 GFVSDIRGDLIAGLGFFGG---GRVSLFTSNLSSGGLRVFDSGEGSF-SSASISPGMKVTAGL-ETAREARLVTVDPRDG 228 (582)
T ss_dssp EEEEEEETTEEEEEEEEET---TEEEEEEEETTTCCCEEECCSSCEE-EEEEECTTSCEEEEE-ECSSCEEEEEECTTTC
T ss_pred eEEECCCCCEEEEEEEcCC---CCeEEEEEcCCCCCceEeecCCCcc-ccceECCCCCEEEEc-cCCCeeEEEEEcCCCC
Confidence 2222345555554444311 1246999999999888775432211 112222366654433 2333456899999998
Q ss_pred CeEecCCCCcCCCCCce--------EEECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCe
Q 014222 289 SWFPVYDGMVAGWRNPS--------ASLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGK 360 (428)
Q Consensus 289 ~W~~~~~~~~~~~~~~~--------~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~ 360 (428)
+...+.. ......... ..-+|++++.+..++ .+.+|+. .+.... +. +.. ....+. +++
T Consensus 229 ~~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g-~~~l~~~--g~~~~~---~~--~~v----~~~~~s-dg~ 294 (582)
T 3o4h_A 229 SVEDLEL-PSKDFSSYRPTAITWLGYLPDGRLAVVARREG-RSAVFID--GERVEA---PQ--GNH----GRVVLW-RGK 294 (582)
T ss_dssp CEEECCC-SCSHHHHHCCSEEEEEEECTTSCEEEEEEETT-EEEEEET--TEEECC---CS--SEE----EEEEEE-TTE
T ss_pred cEEEccC-CCcChhhhhhccccceeEcCCCcEEEEEEcCC-cEEEEEE--CCeecc---CC--Cce----EEEEec-CCE
Confidence 8773322 111101111 233677877776554 6778887 333321 11 111 122334 788
Q ss_pred EEEEeC-CCeEEEEEeecCCC
Q 014222 361 LCIIRN-NMSISLVDVSKSNG 380 (428)
Q Consensus 361 lyv~GG-~~~~~~v~~yd~~~ 380 (428)
+++.++ ......++.+|..+
T Consensus 295 ~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 295 LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEEETTEEEEEEEETTCC
T ss_pred EEEEEcCCCCCCeEEEEcCCC
Confidence 776654 44556788888653
No 188
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.97 E-value=1 Score=41.61 Aligned_cols=175 Identities=7% Similarity=-0.056 Sum_probs=89.1
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEe-CCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcce-e
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLS-GCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFF-G 210 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~-~ 210 (428)
.+.+||..+++.......... ...-.+++... +..+++.|+.+ ..+.+||..++....+.......... .
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 168 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGP--GDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGSVIQVFAKTDSWDYWYCC 168 (383)
T ss_dssp CEEEEETTSTTCEEEECCCST--TCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSCEEEEEECCCCSSCCEEE
T ss_pred eEEEEeCCCcccceeeecCCc--CCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCCceEEEeccCCCCCCeEE
Confidence 678889887776544322111 11223344433 22566776644 36889998876655443222111111 2
Q ss_pred eEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCE-EEEEecCCCCceeEEEEeCC
Q 014222 211 SCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGK-WFLKGLGSHRQVLSEAYQPE 286 (428)
Q Consensus 211 ~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~-lyv~Gg~~~~~~~i~~yd~~ 286 (428)
++. -+++.++.|+.+ ..+.+||.....-..+.... .....+.+ ++. +++.|+.+ ..+..||..
T Consensus 169 ~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~d---~~i~iwd~~ 235 (383)
T 3ei3_B 169 VDVSVSRQMLATGDST-------GRLLLLGLDGHEIFKEKLHK---AKVTHAEFNPRCDWLMATSSVD---ATVKLWDLR 235 (383)
T ss_dssp EEEETTTTEEEEEETT-------SEEEEEETTSCEEEEEECSS---SCEEEEEECSSCTTEEEEEETT---SEEEEEEGG
T ss_pred EEECCCCCEEEEECCC-------CCEEEEECCCCEEEEeccCC---CcEEEEEECCCCCCEEEEEeCC---CEEEEEeCC
Confidence 222 256666667653 58899998554433332211 11122222 444 56666542 246788887
Q ss_pred C----CCeEecCCCCcCCCCCceEEE---CCeEEEEEccCCcEEEEEeCCCCc
Q 014222 287 T----DSWFPVYDGMVAGWRNPSASL---NRHLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 287 ~----~~W~~~~~~~~~~~~~~~~~~---~~~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
+ ........ .......+.+ ++.+++.++.++ .|.+||..+..
T Consensus 236 ~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~l~~~~~d~-~i~iwd~~~~~ 284 (383)
T 3ei3_B 236 NIKDKNSYIAEMP---HEKPVNAAYFNPTDSTKLLTTDQRN-EIRVYSSYDWS 284 (383)
T ss_dssp GCCSTTCEEEEEE---CSSCEEEEEECTTTSCEEEEEESSS-EEEEEETTBTT
T ss_pred CCCcccceEEEec---CCCceEEEEEcCCCCCEEEEEcCCC-cEEEEECCCCc
Confidence 6 22222111 0111112222 567777777654 89999987643
No 189
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.96 E-value=2.2 Score=39.28 Aligned_cols=209 Identities=12% Similarity=0.079 Sum_probs=116.4
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCC--CCcCCcce
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPD--MLRRRHFF 209 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~--~~~~r~~~ 209 (428)
.+..+++.......+.+.. ..-.+++.. .++.||+.-- ....++++++....-+.+.. +..+ .
T Consensus 54 ~I~~i~~~g~~~~~~~~~~-----~~~~~l~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~~~~~~~~~~~p---~ 119 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLNNL-----ENAIALDFHHRRELVFWSDV------TLDRILRANLNGSNVEEVVSTGLESP---G 119 (349)
T ss_dssp CEEEECTTSCCEEEEECSC-----SCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSSCSCC---C
T ss_pred ceEEEeCCCCeeEEeecCC-----CceEEEEEeccccEEEEEec------cCCceEEEecCCCCceEEEeCCCCCc---c
Confidence 5778888877666543321 112344443 3348998732 23578999998765444321 2111 2
Q ss_pred eeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcC--CCCCCccceEEEEE--CCEEEEEecCCCCceeEEEE
Q 014222 210 GSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFIS--DMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAY 283 (428)
Q Consensus 210 ~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~y 283 (428)
++++ .++.||+.-.. ...++++|+....-+.+. .+..+ ..+++- ++.||+..... ...|+++
T Consensus 120 glavd~~~g~ly~~d~~-------~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~--~~~I~r~ 187 (349)
T 3v64_C 120 GLAVDWVHDKLYWTDSG-------TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN--TPRIEAS 187 (349)
T ss_dssp EEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS--SCEEEEE
T ss_pred EEEEecCCCeEEEEcCC-------CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC--CCEEEEE
Confidence 3444 37899997543 258899998766433332 22111 223333 78999985322 2458899
Q ss_pred eCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeE
Q 014222 284 QPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKL 361 (428)
Q Consensus 284 d~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~l 361 (428)
|+....-+.+.. .....-.+.++ .+++||+..... ..|+++|++...-..+.... ...+ .+++..++.|
T Consensus 188 ~~dG~~~~~~~~-~~~~~PnGla~d~~~~~lY~aD~~~-~~I~~~~~dG~~~~~~~~~~--~~~P-----~giav~~~~l 258 (349)
T 3v64_C 188 SMDGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKH-HVIERANLDGSHRKAVISQG--LPHP-----FAITVFEDSL 258 (349)
T ss_dssp ETTSCSCEESCC-SSCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCSCEEEECSS--CSSE-----EEEEEETTEE
T ss_pred eCCCCCcEEEEE-CCCCCcceEEEeCCCCEEEEEECCC-CEEEEEeCCCCceEEEEeCC--CCCc-----eEEEEECCEE
Confidence 987654444322 11111112333 378999998644 58999998764333322111 2222 4555589999
Q ss_pred EEEeCCCeEEEEEeecC
Q 014222 362 CIIRNNMSISLVDVSKS 378 (428)
Q Consensus 362 yv~GG~~~~~~v~~yd~ 378 (428)
|+...... .|..+|.
T Consensus 259 y~td~~~~--~V~~~~~ 273 (349)
T 3v64_C 259 YWTDWHTK--SINSANK 273 (349)
T ss_dssp EEEETTTT--EEEEEET
T ss_pred EEecCCCC--eEEEEEc
Confidence 99864332 3556663
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.94 E-value=1.4 Score=43.75 Aligned_cols=249 Identities=10% Similarity=-0.038 Sum_probs=114.8
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECC--CC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSAR--TN 194 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~--t~ 194 (428)
.+.+||... ....+.++|+.+++-.. .++.. ..-|+++.. ++..+|+.+. ...+.+||+. +.
T Consensus 166 ~~~~~V~~~---~~~~V~viD~~t~~v~~--~i~~g---~~p~~v~~SpDGr~lyv~~~-------dg~V~viD~~~~t~ 230 (567)
T 1qks_A 166 ENLFSVTLR---DAGQIALIDGSTYEIKT--VLDTG---YAVHISRLSASGRYLFVIGR-------DGKVNMIDLWMKEP 230 (567)
T ss_dssp GGEEEEEET---TTTEEEEEETTTCCEEE--EEECS---SCEEEEEECTTSCEEEEEET-------TSEEEEEETTSSSC
T ss_pred CceEEEEeC---CCCeEEEEECCCCeEEE--EEeCC---CCccceEECCCCCEEEEEcC-------CCeEEEEECCCCCC
Confidence 456777653 33488999999876432 12221 112344443 4546887641 2379999985 44
Q ss_pred ceeeCCCCCcCCcceeeEEE-----CC-EEEEEccccCCCCCCCCeEEEEeCCCCceEE-cC--CC--------CCCccc
Q 014222 195 KWHRAPDMLRRRHFFGSCVI-----NN-CLYVAGGENGGVHRSLRSAEVYDPNKNRWSF-IS--DM--------STAMVP 257 (428)
Q Consensus 195 ~W~~~~~~~~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~--~~--------p~~~~~ 257 (428)
+ .+..++....-..+++- +| .+|+..-. ...+.++|..|.+=.. ++ .+ |.++..
T Consensus 231 ~--~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~-------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva 301 (567)
T 1qks_A 231 T--TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW-------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVA 301 (567)
T ss_dssp C--EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE-------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEE
T ss_pred c--EeEEEecCCCCceeEEccccCCCCCEEEEEEcc-------CCeEEEEECCCCcEEEEEeccccccccccccCCCceE
Confidence 3 22233222222233443 45 56665433 2678899977754322 11 11 112222
Q ss_pred eEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCce-EEECCeEEEEEccCCcEEEEEeCCCCceeeC
Q 014222 258 FIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPS-ASLNRHLYALDCKDGCKIRVYDEVTDSWSKH 336 (428)
Q Consensus 258 ~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v 336 (428)
...+..++..+++.-.. ...+...|..+.....+........-+.. ..-+++.+++.....+.|.++|.++++-...
T Consensus 302 ~i~~s~~~~~~vv~~~~--~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 302 AILASHYRPEFIVNVKE--TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI 379 (567)
T ss_dssp EEEECSSSSEEEEEETT--TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred EEEEcCCCCEEEEEecC--CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEE
Confidence 22222233334332211 12356777766554333321111111111 2234554444433446899999998863322
Q ss_pred cccccccCCcccccceEEEEe-CCeEEEEeCCCeEEEEEeecCCCCCCCccccccceeccCC
Q 014222 337 IDSKMHLGNSRALEAAALVPL-NGKLCIIRNNMSISLVDVSKSNGERGASAEHLWETISGKG 397 (428)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~v~~yd~~~~~~~~~~~~W~~~~~~~ 397 (428)
.......+.. +.+...+.. ++.+|+.+... ...|.++|..+++ .....|+.+..++
T Consensus 380 i~vgg~~Php--g~g~~~~~p~~g~v~~t~~~g-~~~Vsvid~~~~~--~~~~~~kvv~~i~ 436 (567)
T 1qks_A 380 EDTGGQTPHP--GRGANFVHPTFGPVWATSHMG-DDSVALIGTDPEG--HPDNAWKILDSFP 436 (567)
T ss_dssp EECSSSSBCC--TTCEEEEETTTEEEEEEEBSS-SSEEEEEECCTTT--CTTTBTSEEEEEE
T ss_pred EeccCcCCCC--ccceeeECCCCCcEEEeCCCC-CCeEEEecCCCCC--CccccCEEEEEEe
Confidence 1110011111 112333333 36788776322 1235566655410 0113488766543
No 191
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.81 E-value=1.7 Score=44.08 Aligned_cols=191 Identities=9% Similarity=-0.030 Sum_probs=97.9
Q ss_pred CceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCC-ceeeCCCCCcCCc-
Q 014222 130 GKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTN-KWHRAPDMLRRRH- 207 (428)
Q Consensus 130 ~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~-~W~~~~~~~~~r~- 207 (428)
....++++|..+++-..+...... ......++...+++.++++..+... ....++++|..+. ..+.+........
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPK--EKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCT--TCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred CeeEEEEEECCCCceEeeccCCCC--ceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 345799999998886665432111 0111223333232444444433221 3458999999988 6655432111110
Q ss_pred --ceeeEE-E--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECC-EEEEEecCCC-CceeE
Q 014222 208 --FFGSCV-I--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEG-KWFLKGLGSH-RQVLS 280 (428)
Q Consensus 208 --~~~~~~-~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g-~lyv~Gg~~~-~~~~i 280 (428)
...++. - ++++++.+..+ ....++.+|........+..-........+..-++ .||+.+.... ....+
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~-----g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l 384 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRD-----GWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHF 384 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTT-----SSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEE
T ss_pred CccCCceeecCCCCEEEEEEccC-----CccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEE
Confidence 011222 2 67765555432 13678888877777776643221111111111244 5666654322 23468
Q ss_pred EEEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCC---cEEEEEeCCCCc
Q 014222 281 EAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDG---CKIRVYDEVTDS 332 (428)
Q Consensus 281 ~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~---~~i~~yd~~~~~ 332 (428)
+.+|..+.+.+.+.. ... ...+. -+++.+++...+. ..++++|.++++
T Consensus 385 ~~~d~~~~~~~~l~~--~~~--~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 385 YCIDIKGGKTKDLTP--ESG--MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEETTCCCCEESCC--SSS--EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEcCCCCceeccC--CCc--eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 899998887666652 111 11222 2566555543222 469999988876
No 192
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.81 E-value=1.2 Score=39.93 Aligned_cols=142 Identities=12% Similarity=0.068 Sum_probs=70.0
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEE-
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF- 247 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~- 247 (428)
..++.|+.+ ..+.+||..+..-...-.............-+++.++.|+.+ ..+.+||..+.+-..
T Consensus 26 ~~l~s~~~d------g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-------~~i~vwd~~~~~~~~~ 92 (304)
T 2ynn_A 26 PWVLTTLYS------GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-------FRIRVFNYNTGEKVVD 92 (304)
T ss_dssp SEEEEEETT------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-------SEEEEEETTTCCEEEE
T ss_pred CEEEEEcCC------CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-------CEEEEEECCCCcEEEE
Confidence 566666654 268888988765332111111111111222355666667654 578999988765321
Q ss_pred cCCCCCCccceEEEE-ECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCC-CceEEE---CCeEEEEEccCCcE
Q 014222 248 ISDMSTAMVPFIGVV-YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWR-NPSASL---NRHLYALDCKDGCK 322 (428)
Q Consensus 248 ~~~~p~~~~~~~~~~-~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~-~~~~~~---~~~lyv~gG~~~~~ 322 (428)
+..-.. .-..++. -++.+.+.|+.+. .+..||..++. ..... ...... ..++.+ ++.+++.|+.++ .
T Consensus 93 ~~~h~~--~v~~~~~~~~~~~l~sgs~D~---~v~lWd~~~~~-~~~~~-~~~h~~~v~~v~~~p~~~~~l~sgs~D~-~ 164 (304)
T 2ynn_A 93 FEAHPD--YIRSIAVHPTKPYVLSGSDDL---TVKLWNWENNW-ALEQT-FEGHEHFVMCVAFNPKDPSTFASGCLDR-T 164 (304)
T ss_dssp EECCSS--CEEEEEECSSSSEEEEEETTS---CEEEEEGGGTT-EEEEE-ECCCCSCEEEEEECTTCTTEEEEEETTS-E
T ss_pred EeCCCC--cEEEEEEcCCCCEEEEECCCC---eEEEEECCCCc-chhhh-hcccCCcEEEEEECCCCCCEEEEEeCCC-e
Confidence 111111 1111222 2455555565432 35678876542 11111 111111 112333 456778887765 8
Q ss_pred EEEEeCCCC
Q 014222 323 IRVYDEVTD 331 (428)
Q Consensus 323 i~~yd~~~~ 331 (428)
|.+||..+.
T Consensus 165 v~iwd~~~~ 173 (304)
T 2ynn_A 165 VKVWSLGQS 173 (304)
T ss_dssp EEEEETTCS
T ss_pred EEEEECCCC
Confidence 999998654
No 193
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=94.79 E-value=0.0087 Score=53.53 Aligned_cols=45 Identities=18% Similarity=0.316 Sum_probs=40.3
Q ss_pred CCCCChHHHHHHhcccccCCccchhhhchHhHHhhhcCChhHHHH
Q 014222 67 LLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLR 111 (428)
Q Consensus 67 ~~~~lpddl~~~il~rlp~~~l~~~~~v~k~W~~l~~~~~f~~~r 111 (428)
.+..||+|++..|++.|+.++++++..|||+|+.+..++.+.+..
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~ 48 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYF 48 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHH
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 356799999999999999999999999999999999999765544
No 194
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.79 E-value=2.3 Score=38.58 Aligned_cols=197 Identities=12% Similarity=0.072 Sum_probs=102.4
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCC--ceEeCCCCCC----CCccccccEEEEEe-CCEEEEEeeeCCCCCCCceEEEEE
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQ--LWQPLPPIPK----EYSEALGFGCAVLS-GCHLYLFGGKDPLKGSMRRVIFYS 190 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~--~W~~l~~~~~----~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd 190 (428)
++.||+... ....+..||+... .-..+..... ......-.++++.. ++.||+..++. ...+.+||
T Consensus 101 ~g~l~v~d~---~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~ 172 (329)
T 3fvz_A 101 DGNYWVTDV---ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFS 172 (329)
T ss_dssp TSCEEEEET---TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-----CCEEEEEC
T ss_pred CCCEEEEEC---CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEc
Confidence 455777653 2347889998755 2222221100 00001223566653 44799996521 24788999
Q ss_pred CCCCceeeCCCC-------CcC-CcceeeEEE-C-CEEEEEccccCCCCCCCCeEEEEeCCCCceEE-cCCCCCCccceE
Q 014222 191 ARTNKWHRAPDM-------LRR-RHFFGSCVI-N-NCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF-ISDMSTAMVPFI 259 (428)
Q Consensus 191 ~~t~~W~~~~~~-------~~~-r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~~~~~~ 259 (428)
+....-..+... +.. ..-.++++- + +.|||....+ ..+.+||+.+.+... +...........
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-------~~I~~~~~~~G~~~~~~~~~~~~~~~~~ 245 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-------GRIQCFKTDTKEFVREIKHASFGRNVFA 245 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT-------TEEEEEETTTCCEEEEECCTTTTTCEEE
T ss_pred CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC-------CEEEEEECCCCcEEEEEeccccCCCcce
Confidence 654433333211 011 112234443 3 8999986542 689999998666543 221111212223
Q ss_pred EEEECCEEEEEecC----CCCceeEEEEeCCCCCeEecCCCCcCCCCCc-eEEE--CCeEEEEEccCCcEEEEEeCCC
Q 014222 260 GVVYEGKWFLKGLG----SHRQVLSEAYQPETDSWFPVYDGMVAGWRNP-SASL--NRHLYALDCKDGCKIRVYDEVT 330 (428)
Q Consensus 260 ~~~~~g~lyv~Gg~----~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~--~~~lyv~gG~~~~~i~~yd~~~ 330 (428)
++...+.+|+..|. ......+..+|+.+++....-.........+ .+.+ +|.||+....+ +.|++|+++.
T Consensus 246 ~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~-~~I~~~~~~~ 322 (329)
T 3fvz_A 246 ISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHT-NTVWKFTLTE 322 (329)
T ss_dssp EEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSS-CCEEEEEEEE
T ss_pred eeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCC-CEEEEEeCCc
Confidence 33344666666552 1223357899988887654421111222222 2333 67899988654 4899998764
No 195
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.75 E-value=0.29 Score=45.55 Aligned_cols=144 Identities=10% Similarity=0.104 Sum_probs=70.6
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCC-----------CcCCcceeeEEE---CCEEEEEccccCCCCCCCCe
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDM-----------LRRRHFFGSCVI---NNCLYVAGGENGGVHRSLRS 234 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~-----------~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~ 234 (428)
..++.|+.++ .+.+||..+......... ...........+ ++.+++.|+.+ ..
T Consensus 57 ~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-------~~ 123 (408)
T 4a11_B 57 RYMLSGGSDG------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD-------KT 123 (408)
T ss_dssp CEEEEEETTS------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-------SE
T ss_pred CEEEEEcCCC------eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-------Ce
Confidence 5667776542 578888877653322110 001111112222 44566666653 57
Q ss_pred EEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CC
Q 014222 235 AEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NR 310 (428)
Q Consensus 235 v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~ 310 (428)
+.+||..+.+-...-..+........... ++.+.+.|+... .+..||..+.+-...-. .......++.+ ++
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~d~~~~~~~~~~~--~~~~~v~~~~~~~~~ 198 (408)
T 4a11_B 124 LKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP---KVQLCDLKSGSCSHILQ--GHRQEILAVSWSPRY 198 (408)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS---SEEEEESSSSCCCEEEC--CCCSCEEEEEECSSC
T ss_pred EEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC---eEEEEeCCCcceeeeec--CCCCcEEEEEECCCC
Confidence 89999988765443332222111111111 334555555322 36788887654222111 00111112222 33
Q ss_pred e-EEEEEccCCcEEEEEeCCCC
Q 014222 311 H-LYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 311 ~-lyv~gG~~~~~i~~yd~~~~ 331 (428)
. +++.|+.++ .|.+||..+.
T Consensus 199 ~~ll~~~~~dg-~i~i~d~~~~ 219 (408)
T 4a11_B 199 DYILATASADS-RVKLWDVRRA 219 (408)
T ss_dssp TTEEEEEETTS-CEEEEETTCS
T ss_pred CcEEEEEcCCC-cEEEEECCCC
Confidence 3 777777664 7999998765
No 196
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.70 E-value=1.4 Score=39.77 Aligned_cols=183 Identities=7% Similarity=-0.028 Sum_probs=87.6
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCc----eeeCCCCCcCCcceeeEE-ECCE-EEEEccccCCCCCCCCeEEEEeC-C
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNK----WHRAPDMLRRRHFFGSCV-INNC-LYVAGGENGGVHRSLRSAEVYDP-N 241 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~----W~~~~~~~~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~v~~yd~-~ 241 (428)
..++.|+.+ ..+.+||..+.. ...... ....-.+++. -+++ .++.|+.+ ..+.+||. .
T Consensus 24 ~~l~~~~~d------~~v~iw~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d-------g~i~~wd~~~ 88 (342)
T 1yfq_A 24 SLLLITSWD------GSLTVYKFDIQAKNVDLLQSLR--YKHPLLCCNFIDNTDLQIYVGTVQ-------GEILKVDLIG 88 (342)
T ss_dssp TEEEEEETT------SEEEEEEEETTTTEEEEEEEEE--CSSCEEEEEEEESSSEEEEEEETT-------SCEEEECSSS
T ss_pred CEEEEEcCC------CeEEEEEeCCCCccccceeeee--cCCceEEEEECCCCCcEEEEEcCC-------CeEEEEEecc
Confidence 466666643 367788876655 222211 1111112222 2566 66667653 47899999 8
Q ss_pred CCceEEcCC--CCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCC-------eEecCCCCcCCCCCceEEECCeE
Q 014222 242 KNRWSFISD--MSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDS-------WFPVYDGMVAGWRNPSASLNRHL 312 (428)
Q Consensus 242 t~~W~~~~~--~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~-------W~~~~~~~~~~~~~~~~~~~~~l 312 (428)
+.+-..+.. ..... ..+....+.+++.|+.. ..+..||..+.. .+.+.... .......+.+...-
T Consensus 89 ~~~~~~~~~~~~~~~v--~~l~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 89 SPSFQALTNNEANLGI--CRICKYGDDKLIAASWD---GLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR 162 (342)
T ss_dssp SSSEEECBSCCCCSCE--EEEEEETTTEEEEEETT---SEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE
T ss_pred CCceEeccccCCCCce--EEEEeCCCCEEEEEcCC---CeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc
Confidence 887666554 22221 22222324444444432 246778775400 11122111 11111123333333
Q ss_pred EEEEccCCcEEEEEeCCC-Cc--eeeCcccccccCCcccccceEEEEe-CCeEEEEeCCCeEEEEEeecCC
Q 014222 313 YALDCKDGCKIRVYDEVT-DS--WSKHIDSKMHLGNSRALEAAALVPL-NGKLCIIRNNMSISLVDVSKSN 379 (428)
Q Consensus 313 yv~gG~~~~~i~~yd~~~-~~--W~~v~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~v~~yd~~ 379 (428)
+++++.+ ..|.+||..+ .. ...... . ..... ....... ++++++.|+..+...++.++..
T Consensus 163 l~~~~~d-~~i~i~d~~~~~~~~~~~~~~-~-~~~~i----~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 163 LIVGMNN-SQVQWFRLPLCEDDNGTIEES-G-LKYQI----RDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEEEEST-TEEEEEESSCCTTCCCEEEEC-S-CSSCE----EEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred EEEEeCC-CeEEEEECCccccccceeeec-C-CCCce----eEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 5555544 4899999887 33 221111 1 11111 1222333 5778888887765555556554
No 197
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.59 E-value=2.2 Score=38.72 Aligned_cols=188 Identities=8% Similarity=-0.006 Sum_probs=94.5
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
++.+|+.+.. ...++.||+.+++...+. .+. .-.+++...++.+++.. ...+++||+.+++.+
T Consensus 60 ~~~l~~~d~~---~~~i~~~d~~~~~~~~~~-~~~-----~v~~i~~~~dg~l~v~~--------~~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 60 SGTAWWFNIL---ERELHELHLASGRKTVHA-LPF-----MGSALAKISDSKQLIAS--------DDGLFLRDTATGVLT 122 (326)
T ss_dssp TTEEEEEEGG---GTEEEEEETTTTEEEEEE-CSS-----CEEEEEEEETTEEEEEE--------TTEEEEEETTTCCEE
T ss_pred CCEEEEEECC---CCEEEEEECCCCcEEEEE-CCC-----cceEEEEeCCCeEEEEE--------CCCEEEEECCCCcEE
Confidence 4567777632 237899999988765442 121 12334444444777753 125999999998877
Q ss_pred eCCCCCc--CCcceeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE-CC-EEEEEe
Q 014222 198 RAPDMLR--RRHFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY-EG-KWFLKG 271 (428)
Q Consensus 198 ~~~~~~~--~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~g-~lyv~G 271 (428)
.+..... +........ -+|++|+..... ........+++|| +.+...+..- .. .....+.. ++ .+|+..
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~-~~~~~~~~l~~~~--~g~~~~~~~~-~~-~~~~i~~s~dg~~lyv~~ 197 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGR-KAETGAGSIYHVA--KGKVTKLFAD-IS-IPNSICFSPDGTTGYFVD 197 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEET-TCCTTCEEEEEEE--TTEEEEEEEE-ES-SEEEEEECTTSCEEEEEE
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCC-cCCCCceEEEEEe--CCcEEEeeCC-Cc-ccCCeEEcCCCCEEEEEE
Confidence 6543321 111111222 257787743211 1112235788888 4555443210 00 11122222 45 578764
Q ss_pred cCCCCceeEEEEeCC--CC-C------eEecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCcee
Q 014222 272 LGSHRQVLSEAYQPE--TD-S------WFPVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWS 334 (428)
Q Consensus 272 g~~~~~~~i~~yd~~--~~-~------W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~ 334 (428)
.. ...+++||.. ++ + +..+.. .........+ +|.||+.... +..|.+||++.+.-.
T Consensus 198 ~~---~~~I~~~d~~~~~Gl~~~~~~~~~~~~~---~~~~p~gi~~d~~G~lwva~~~-~~~v~~~d~~g~~~~ 264 (326)
T 2ghs_A 198 TK---VNRLMRVPLDARTGLPTGKAEVFIDSTG---IKGGMDGSVCDAEGHIWNARWG-EGAVDRYDTDGNHIA 264 (326)
T ss_dssp TT---TCEEEEEEBCTTTCCBSSCCEEEEECTT---SSSEEEEEEECTTSCEEEEEET-TTEEEEECTTCCEEE
T ss_pred CC---CCEEEEEEcccccCCcccCceEEEECCC---CCCCCCeeEECCCCCEEEEEeC-CCEEEEECCCCCEEE
Confidence 32 2357888865 44 2 211110 0001112233 6788887532 347999999654333
No 198
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.58 E-value=2.8 Score=38.67 Aligned_cols=178 Identities=8% Similarity=-0.076 Sum_probs=91.4
Q ss_pred ceEEEEECCCCceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCC--ccceEE
Q 014222 184 RRVIFYSARTNKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTA--MVPFIG 260 (428)
Q Consensus 184 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~--~~~~~~ 260 (428)
..+.++|+.+.+.......... -..++. -++++++.++. +.+.+++..+..-......... ......
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspdg~~l~s~s~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRGE--VKDLHFSTDGKVVAYITG--------SSLEVISTVTGSCIARKTDFDKNWSLSKIN 226 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSSC--CCEEEECTTSSEEEEECS--------SCEEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred CEEEEeECCCCcEEEEeCCCCc--eEEEEEccCCceEEeccc--------eeEEEEEeccCcceeeeecCCCCCCEEEEE
Confidence 4688999988765432211111 112222 25666666542 3567777777654332222111 111223
Q ss_pred EEECCEEEEEecCC-CCceeEEEEeCCCCCeEecCCCCcCCCCCc--eEE--ECCeEEEEEccCCcEEEEEeCCCCceee
Q 014222 261 VVYEGKWFLKGLGS-HRQVLSEAYQPETDSWFPVYDGMVAGWRNP--SAS--LNRHLYALDCKDGCKIRVYDEVTDSWSK 335 (428)
Q Consensus 261 ~~~~g~lyv~Gg~~-~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~--~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~ 335 (428)
..-+++.++.++.. .....+..+|.................... ++. -++++++.|+.++ .|.+||.++.+-
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-~V~iwd~~~~~~-- 303 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN-SIALVKLKDLSM-- 303 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS-CEEEEETTTTEE--
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC-EEEEEECCCCcE--
Confidence 34478877776533 333446777776665543321111111111 222 3788888887764 799999987542
Q ss_pred Ccccc-cccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 336 HIDSK-MHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 336 v~~~~-~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+..+. ..... ........++++++.|+.+.. |.+||+..
T Consensus 304 ~~~~~~gH~~~----V~~v~fSpdg~~laS~S~D~t--vrvw~ip~ 343 (365)
T 4h5i_A 304 SKIFKQAHSFA----ITEVTISPDSTYVASVSAANT--IHIIKLPL 343 (365)
T ss_dssp EEEETTSSSSC----EEEEEECTTSCEEEEEETTSE--EEEEECCT
T ss_pred EEEecCcccCC----EEEEEECCCCCEEEEEeCCCe--EEEEEcCC
Confidence 22111 11111 123445568888888887664 44566543
No 199
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.50 E-value=0.98 Score=40.93 Aligned_cols=178 Identities=10% Similarity=0.025 Sum_probs=94.9
Q ss_pred ceEEEEECCCCceeeCCCCC------------------cCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCC
Q 014222 184 RRVIFYSARTNKWHRAPDML------------------RRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKN 243 (428)
Q Consensus 184 ~~v~~yd~~t~~W~~~~~~~------------------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~ 243 (428)
..+++||+.++.++...... ....-.++++. ++.|||.... ..+.+||+.+.
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~--------~~i~~~d~~~g 111 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY--------YHLSVVGSEGG 111 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT--------TEEEEECTTCE
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC--------CCEEEEeCCCC
Confidence 46888888877665432100 00112345554 5889987432 34788998877
Q ss_pred ceEEcCCCCCC---ccceEEEE-E-CCEEEEEecCC--------------CCceeEEEEeCCCCCeEecCCCCcCCCCCc
Q 014222 244 RWSFISDMSTA---MVPFIGVV-Y-EGKWFLKGLGS--------------HRQVLSEAYQPETDSWFPVYDGMVAGWRNP 304 (428)
Q Consensus 244 ~W~~~~~~p~~---~~~~~~~~-~-~g~lyv~Gg~~--------------~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~ 304 (428)
..+.+...... .....+++ - +|.||+..... .....+++||+.+.+.+.+.... ..-..
T Consensus 112 ~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~--~~p~g 189 (322)
T 2fp8_A 112 HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKEL--HVPGG 189 (322)
T ss_dssp ECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEE--SCCCE
T ss_pred EEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCC--ccCcc
Confidence 66554321111 11122222 3 67899974221 11235889999887765543211 11112
Q ss_pred eEEE-CC-eEEEEEccCCcEEEEEeCCCC---ceeeCcccccccCCcccccceEEEEeCCeEEEEeCC--------CeEE
Q 014222 305 SASL-NR-HLYALDCKDGCKIRVYDEVTD---SWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNN--------MSIS 371 (428)
Q Consensus 305 ~~~~-~~-~lyv~gG~~~~~i~~yd~~~~---~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~--------~~~~ 371 (428)
.+.- ++ .||+..... ..|++||.... ..+.+..++ + + ...++.-+|.|||.... ....
T Consensus 190 ia~~~dg~~lyv~d~~~-~~I~~~~~~~~~~~~~~~~~~~~---g-P----~gi~~d~~G~l~va~~~~~~~~~~~~~~~ 260 (322)
T 2fp8_A 190 AEVSADSSFVLVAEFLS-HQIVKYWLEGPKKGTAEVLVKIP---N-P----GNIKRNADGHFWVSSSEELDGNMHGRVDP 260 (322)
T ss_dssp EEECTTSSEEEEEEGGG-TEEEEEESSSTTTTCEEEEEECS---S-E----EEEEECTTSCEEEEEEEETTSSTTSCEEE
T ss_pred eEECCCCCEEEEEeCCC-CeEEEEECCCCcCCccceEEeCC---C-C----CCeEECCCCCEEEEecCcccccccCCCcc
Confidence 2322 34 588886433 48999998763 333322211 1 2 12233445789987543 2346
Q ss_pred EEEeecCCC
Q 014222 372 LVDVSKSNG 380 (428)
Q Consensus 372 ~v~~yd~~~ 380 (428)
.+.+||+..
T Consensus 261 ~v~~~d~~G 269 (322)
T 2fp8_A 261 KGIKFDEFG 269 (322)
T ss_dssp EEEEECTTS
T ss_pred EEEEECCCC
Confidence 788999876
No 200
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.48 E-value=2.4 Score=39.07 Aligned_cols=194 Identities=8% Similarity=-0.093 Sum_probs=97.4
Q ss_pred ceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE--eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcc
Q 014222 131 KISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL--SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHF 208 (428)
Q Consensus 131 ~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~--~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~ 208 (428)
...++.+|..+++...+.... ......+.. ++..|+.... .........++++|..+..++.+.. ..+...
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~-----~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~ 239 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDT-----AWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAEGES 239 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEES-----SCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCTTEE
T ss_pred cceEEEEECCCCcEEeeccCC-----cccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCCCcc
Confidence 357888999888776654211 111222222 3423444432 2111122579999998888777654 211111
Q ss_pred eeeEEE--CCE-EEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE-CCEEEEEecCC----------
Q 014222 209 FGSCVI--NNC-LYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY-EGKWFLKGLGS---------- 274 (428)
Q Consensus 209 ~~~~~~--~~~-iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~g~lyv~Gg~~---------- 274 (428)
.....+ +++ |++..... + .....+.++|+.+.+...+...+. .. ....- +|+++++++..
T Consensus 240 ~~~~~~spdg~~l~~~~~~~-~--~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFK-G--QTDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp EEEEEECTTSSCEEEEEEET-T--TCCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC---------
T ss_pred ccceEECCCCCEEEEEecCC-C--CccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccc
Confidence 111222 454 44443221 1 112349999999887766654432 11 23333 77766664321
Q ss_pred ---CCceeEEEEeCCCCCeEecCCCCcCC----------CCCceEEECC-eEEEEEccC-CcEEEEEeCCCCceeeCc
Q 014222 275 ---HRQVLSEAYQPETDSWFPVYDGMVAG----------WRNPSASLNR-HLYALDCKD-GCKIRVYDEVTDSWSKHI 337 (428)
Q Consensus 275 ---~~~~~i~~yd~~~~~W~~~~~~~~~~----------~~~~~~~~~~-~lyv~gG~~-~~~i~~yd~~~~~W~~v~ 337 (428)
.....++.+|+.+++...+....... .......-++ .|++..... ...++.+|..+..++.+.
T Consensus 314 ~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHLEH 391 (396)
T ss_dssp -CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC----
T ss_pred cccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccccccc
Confidence 12245889999888766554322110 1111222344 455544322 246888898887777653
No 201
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.46 E-value=0.48 Score=51.83 Aligned_cols=211 Identities=8% Similarity=-0.008 Sum_probs=102.6
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+++...+..... ...+++...++ .++.|+.+ ..+.+||..+++-...-..........+.
T Consensus 1026 ~i~vwd~~~~~~~~~~~~~~-----~v~~~~~~~~~-~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~~v~~~~~ 1093 (1249)
T 3sfz_A 1026 VIQVWNWQTGDYVFLQAHQE-----TVKDFRLLQDS-RLLSWSFD------GTVKVWNVITGRIERDFTCHQGTVLSCAI 1093 (1249)
T ss_dssp BEEEEETTTTEEECCBCCSS-----CEEEEEECSSS-EEEEEESS------SEEEEEETTTTCCCEEEECCSSCCCCEEE
T ss_pred EEEEEECCCCceEEEecCCC-----cEEEEEEcCCC-cEEEEECC------CcEEEEECCCCceeEEEcccCCcEEEEEE
Confidence 67888988887664432221 22334444453 44555543 36889998877532211111111111122
Q ss_pred EECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE--ECCEEEEEecCCCCceeEEEEeCCCCCe
Q 014222 213 VINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV--YEGKWFLKGLGSHRQVLSEAYQPETDSW 290 (428)
Q Consensus 213 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~--~~g~lyv~Gg~~~~~~~i~~yd~~~~~W 290 (428)
.-+++.++.|+.+ ..+.+||..+.+ .+..+.........+. -++++.+.|+.+. .+..||..+.+-
T Consensus 1094 s~d~~~l~s~s~d-------~~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg---~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1094 SSDATKFSSTSAD-------KTAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNG---EIRIWNVSDGQL 1161 (1249)
T ss_dssp CSSSSSCEEECCS-------SCCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTS---CCCEEESSSSCC
T ss_pred CCCCCEEEEEcCC-------CcEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCC---EEEEEECCCCce
Confidence 2356666666653 457788877654 2222221111122222 3677777766433 256888876653
Q ss_pred EecCCCCc-----CCCC--CceEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeE
Q 014222 291 FPVYDGMV-----AGWR--NPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKL 361 (428)
Q Consensus 291 ~~~~~~~~-----~~~~--~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~l 361 (428)
.....+.. .... ...+. -++++.+.++ ..+.+||..+.+-... +....... ....+..+++.
T Consensus 1162 ~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~---g~v~vwd~~~g~~~~~--~~~~~~~i----~~~~~s~dg~~ 1232 (1249)
T 3sfz_A 1162 LHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG---GYLKWWNVATGDSSQT--FYTNGTNL----KKIHVSPDFRT 1232 (1249)
T ss_dssp CCCCCCCC-------CCSCCCEEEECTTSSCEEEES---SSEEEBCSSSCBCCCC--CCCSSCCC----CCCEECSSSCC
T ss_pred EEEeccccccccccccCceEEEEEECCCCCEEEECC---CeEEEEECCCCceeee--eeccCCcc----cEEEECCCCCE
Confidence 22210000 0111 11222 2566666665 3799999887654322 11111111 13344556777
Q ss_pred EEEeCCCeEEEEEeecC
Q 014222 362 CIIRNNMSISLVDVSKS 378 (428)
Q Consensus 362 yv~GG~~~~~~v~~yd~ 378 (428)
+++++..+ .+.+|+.
T Consensus 1233 l~~~~~dg--~v~vw~l 1247 (1249)
T 3sfz_A 1233 YVTVDNLG--ILYILQV 1247 (1249)
T ss_dssp EEEECTTC--CEEEECC
T ss_pred EEEecCCc--EEEEEee
Confidence 77776554 3456654
No 202
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.45 E-value=1.5 Score=44.65 Aligned_cols=188 Identities=10% Similarity=0.030 Sum_probs=90.2
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeC
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDP 240 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~ 240 (428)
++...++.+++.|+.+ ..+.++|..+++-...-.-.... -.+++. -++..++.|+.+ ..+.+||.
T Consensus 436 v~~s~~g~~l~sgs~D------g~v~vwd~~~~~~~~~~~~h~~~-v~~~~~s~~~~~l~s~s~D-------~~i~iwd~ 501 (694)
T 3dm0_A 436 VVLSSDGQFALSGSWD------GELRLWDLAAGVSTRRFVGHTKD-VLSVAFSLDNRQIVSASRD-------RTIKLWNT 501 (694)
T ss_dssp EEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSC-EEEEEECTTSSCEEEEETT-------SCEEEECT
T ss_pred EEECCCCCEEEEEeCC------CcEEEEECCCCcceeEEeCCCCC-EEEEEEeCCCCEEEEEeCC-------CEEEEEEC
Confidence 3333333577777654 36889998876533211001111 111222 245666667654 57888887
Q ss_pred CCCceEEcCCCCCC-ccceEEEEE--CC--EEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCC-CceEEE--CCeE
Q 014222 241 NKNRWSFISDMSTA-MVPFIGVVY--EG--KWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWR-NPSASL--NRHL 312 (428)
Q Consensus 241 ~t~~W~~~~~~p~~-~~~~~~~~~--~g--~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~-~~~~~~--~~~l 312 (428)
....=..+...... ......+.+ ++ .+.+.|+.+. .+..||..+.+-...-. .... ..++.+ ++++
T Consensus 502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~---~v~vwd~~~~~~~~~~~---~h~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK---TVKVWNLSNCKLRSTLA---GHTGYVSTVAVSPDGSL 575 (694)
T ss_dssp TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS---CEEEEETTTCCEEEEEC---CCSSCEEEEEECTTSSE
T ss_pred CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC---eEEEEECCCCcEEEEEc---CCCCCEEEEEEeCCCCE
Confidence 65532222221111 111222223 22 3444554322 36788987765432211 1111 112222 6778
Q ss_pred EEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 313 YALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 313 yv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
++.|+.++ .|.+||..+.+-.. .+... .. ........++.+++.+.... +.+||..+
T Consensus 576 l~sg~~Dg-~i~iwd~~~~~~~~--~~~~~-~~----v~~~~~sp~~~~l~~~~~~~---i~iwd~~~ 632 (694)
T 3dm0_A 576 CASGGKDG-VVLLWDLAEGKKLY--SLEAN-SV----IHALCFSPNRYWLCAATEHG---IKIWDLES 632 (694)
T ss_dssp EEEEETTS-BCEEEETTTTEEEE--CCBCS-SC----EEEEEECSSSSEEEEEETTE---EEEEETTT
T ss_pred EEEEeCCC-eEEEEECCCCceEE--EecCC-Cc----EEEEEEcCCCcEEEEEcCCC---EEEEECCC
Confidence 88887664 79999988764322 21111 11 11223334455555544332 67888876
No 203
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.43 E-value=0.046 Score=51.32 Aligned_cols=141 Identities=13% Similarity=0.077 Sum_probs=57.4
Q ss_pred eCCEEEEEeeeCCCCCCCceEEEEECCCCc--eeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCC
Q 014222 166 SGCHLYLFGGKDPLKGSMRRVIFYSARTNK--WHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKN 243 (428)
Q Consensus 166 ~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~ 243 (428)
.++.||+.+ .+ ..++.+|..+++ |+.-. . ......++.++++|+.++.+ ..+.++|..+.
T Consensus 8 ~~~~v~~gs-~d------g~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~d-------g~l~a~d~~tG 69 (369)
T 2hz6_A 8 PETLLFVST-LD------GSLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPND-------GSLYTLGSKNN 69 (369)
T ss_dssp CTTEEEEEE-TT------SEEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTT-------CCEEEC-----
T ss_pred eCCEEEEEc-CC------CEEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCC-------CEEEEEECCCC
Confidence 343676653 22 368899988775 76533 1 11123345567788876543 46889998654
Q ss_pred --ceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCC--CeEecCCCCcCCCCCceEEECCeEEEEEccC
Q 014222 244 --RWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETD--SWFPVYDGMVAGWRNPSASLNRHLYALDCKD 319 (428)
Q Consensus 244 --~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~ 319 (428)
.|+.-...+.......+...++.+|+.+. ...++++|++++ .|+.-... .. ..+..++.||+.. .+
T Consensus 70 ~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~----dg~v~a~D~~tG~~~w~~~~~~--~~---~~~p~~~~v~~~~-~d 139 (369)
T 2hz6_A 70 EGLTKLPFTIPELVQASPCRSSDGILYMGKK----QDIWYVIDLLTGEKQQTLSSAF--AD---SLSPSTSLLYLGR-TE 139 (369)
T ss_dssp CCSEECSCCHHHHHTTCSCC-----CCCCEE----EEEEEEECCC---------------------------EEEEE-EE
T ss_pred ceeeeeeccCccccccCceEecCCEEEEEeC----CCEEEEEECCCCcEEEEecCCC--cc---cccccCCEEEEEe-cC
Confidence 46532111110011111124666665321 224789998876 46643221 01 1112455566543 22
Q ss_pred CcEEEEEeCCCCc--eee
Q 014222 320 GCKIRVYDEVTDS--WSK 335 (428)
Q Consensus 320 ~~~i~~yd~~~~~--W~~ 335 (428)
..++.||+++.+ |+.
T Consensus 140 -g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 140 -YTITMYDTKTRELRWNA 156 (369)
T ss_dssp -EEEECCCSSSSSCCCEE
T ss_pred -CEEEEEECCCCCEEEeE
Confidence 368999988764 774
No 204
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.20 E-value=3.1 Score=40.92 Aligned_cols=142 Identities=11% Similarity=-0.019 Sum_probs=75.5
Q ss_pred CEEEEEccc-cCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEe
Q 014222 216 NCLYVAGGE-NGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFP 292 (428)
Q Consensus 216 ~~iyv~GG~-~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~ 292 (428)
++.++.|+. + ..+.+||..+.+... ..+...........+ ++++.+.|+.+. .+..||..+.+-..
T Consensus 456 ~~~l~~~~~~d-------~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg---~i~iw~~~~~~~~~ 524 (615)
T 1pgu_A 456 QNYVAVGLEEG-------NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMG---KILLYDLQSREVKT 524 (615)
T ss_dssp SSEEEEEETTT-------SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEEE
T ss_pred CCEEEEeecCC-------CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCC---eEEEeeCCCCccee
Confidence 666666664 3 578999998876542 222222222223333 777777776432 36789987765432
Q ss_pred cCCCCc-CCCCCceEEE------------CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCC
Q 014222 293 VYDGMV-AGWRNPSASL------------NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNG 359 (428)
Q Consensus 293 ~~~~~~-~~~~~~~~~~------------~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~ 359 (428)
. ... .......+.+ ++++++.|+.++ .|.+||.++.. ..+..+...... ........++
T Consensus 525 ~--~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg-~i~iw~~~~~~-~~~~~~~~h~~~----v~~l~~s~~~ 596 (615)
T 1pgu_A 525 S--RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT-NIFIYSVKRPM-KIIKALNAHKDG----VNNLLWETPS 596 (615)
T ss_dssp C--CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTS-CEEEEESSCTT-CCEEETTSSTTC----EEEEEEEETT
T ss_pred E--eecCCCCceeEEEEcCccccccccccCCCEEEEEcCCC-cEEEEECCCCc-eechhhhcCccc----eEEEEEcCCC
Confidence 2 111 1111112333 678888887664 89999998752 111111111111 1234556678
Q ss_pred eEEEEeCCCeEEEEEeecCC
Q 014222 360 KLCIIRNNMSISLVDVSKSN 379 (428)
Q Consensus 360 ~lyv~GG~~~~~~v~~yd~~ 379 (428)
+ ++.+|.++. +.+||..
T Consensus 597 ~-l~s~~~d~~--v~iw~~~ 613 (615)
T 1pgu_A 597 T-LVSSGADAC--IKRWNVV 613 (615)
T ss_dssp E-EEEEETTSC--EEEEEEC
T ss_pred C-eEEecCCce--EEEEeee
Confidence 8 777776553 3455543
No 205
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.15 E-value=3.5 Score=38.11 Aligned_cols=178 Identities=7% Similarity=0.057 Sum_probs=87.0
Q ss_pred eEEEEeCCCCceEeCC--CCCCCCccccccEEEEE--eCCEEEEEeeeCCCCCCCceEEEEECCCCc--eeeCCCCCcCC
Q 014222 133 SWHAFDPIYQLWQPLP--PIPKEYSEALGFGCAVL--SGCHLYLFGGKDPLKGSMRRVIFYSARTNK--WHRAPDMLRRR 206 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~--~~~~~~~~r~~~~~~~~--~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~r 206 (428)
.+.+||..+++-...- ..+... .....+++.. ++ .+++.|+.++ .+.+||..... -..+... ...
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~-~~l~sgs~D~------~v~~wd~~~~~~~~~~~~~h-~~~ 251 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGH-TADVLSLSINSLNA-NMFISGSCDT------TVRLWDLRITSRAVRTYHGH-EGD 251 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSC-CSCEEEEEECSSSC-CEEEEEETTS------CEEEEETTTTCCCCEEECCC-SSC
T ss_pred cEEEEEcCCCcEEEEeecccCCCC-ccCeEEEEeecCCC-CEEEEEECCC------eEEEEECCCCCcceEEECCc-CCC
Confidence 6788998887643321 111110 0111222222 34 6888887653 57888875321 1111110 001
Q ss_pred cceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEc-CCCCC------CccceEEEEECCEEEEEecCCCCce
Q 014222 207 HFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFI-SDMST------AMVPFIGVVYEGKWFLKGLGSHRQV 278 (428)
Q Consensus 207 ~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~-~~~p~------~~~~~~~~~~~g~lyv~Gg~~~~~~ 278 (428)
. .+++. -++..++.|+.+ ..+.+||..+..-... ...+. +.....+...+|++.+.|+.+.
T Consensus 252 v-~~v~~~p~~~~l~s~s~D-------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg--- 320 (380)
T 3iz6_a 252 I-NSVKFFPDGQRFGTGSDD-------GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG--- 320 (380)
T ss_dssp C-CEEEECTTSSEEEEECSS-------SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS---
T ss_pred e-EEEEEecCCCeEEEEcCC-------CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC---
Confidence 1 11222 256677777764 5788999988753322 11111 0111222233677666665432
Q ss_pred eEEEEeCCCCCeEe-cCCCCcCCCC-CceEE--ECCeEEEEEccCCcEEEEEeCCCC
Q 014222 279 LSEAYQPETDSWFP-VYDGMVAGWR-NPSAS--LNRHLYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 279 ~i~~yd~~~~~W~~-~~~~~~~~~~-~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~ 331 (428)
.+..||..+.+-.. +......... ..++. -++..++.|+.++ .|.+||....
T Consensus 321 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~-~i~iW~~~~~ 376 (380)
T 3iz6_a 321 DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK-NLKIWAFSGH 376 (380)
T ss_dssp CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-CEEEEECCSS
T ss_pred CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-CEEEEecCCC
Confidence 46789987765432 2111111111 11222 3677888887765 7888877653
No 206
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.13 E-value=2.3 Score=41.68 Aligned_cols=179 Identities=7% Similarity=0.064 Sum_probs=83.7
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeC
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDP 240 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~ 240 (428)
++...+++.++.|+.+ ..+.+||.....-..+.... ... .+++. -+++.++.++.+ ..+.+||.
T Consensus 391 ~~~s~dg~~l~~~~~d------~~v~~~~~~~~~~~~~~~~~-~~v-~~~~~s~d~~~l~~~~~d-------~~v~~w~~ 455 (577)
T 2ymu_A 391 VAFSPDGQTIASASDD------KTVKLWNRNGQLLQTLTGHS-SSV-WGVAFSPDDQTIASASDD-------KTVKLWNR 455 (577)
T ss_dssp EEECTTSSCEEEEETT------SEEEEECTTCCEEEEEECCS-SCE-EEEEECTTSSEEEEEETT-------SEEEEEET
T ss_pred EEECCCCCEEEEEeCC------CEEEEEeCCCCEEEEecCCC-CCe-EEEEECCCCCEEEEEcCC-------CEEEEEEC
Confidence 3333333566666643 25778885433222221111 111 11222 256666666653 47888987
Q ss_pred CCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEcc
Q 014222 241 NKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCK 318 (428)
Q Consensus 241 ~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~ 318 (428)
....-..+...... ....+..-++++.+.|+.+ ..+..||.....-..+.... .....+. -++++.+.++.
T Consensus 456 ~~~~~~~~~~~~~~-v~~~~~spd~~~las~~~d---~~i~iw~~~~~~~~~~~~h~---~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 456 NGQLLQTLTGHSSS-VRGVAFSPDGQTIASASDD---KTVKLWNRNGQLLQTLTGHS---SSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp TSCEEEEEECCSSC-EEEEEECTTSCEEEEEETT---SEEEEEETTSCEEEEEECCS---SCEEEEEECTTSSCEEEEET
T ss_pred CCCEEEEEcCCCCC-EEEEEEcCCCCEEEEEeCC---CEEEEEcCCCCEEEEEeCCC---CCEEEEEEcCCCCEEEEEEC
Confidence 66544443322111 1111122267776666542 24667885433222222110 0011222 26777777776
Q ss_pred CCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeE
Q 014222 319 DGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSI 370 (428)
Q Consensus 319 ~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~ 370 (428)
++ .|.+||.....-..+ ....... ....+..+++.++.||.+..
T Consensus 529 dg-~v~lwd~~~~~~~~~---~~h~~~v----~~~~fs~dg~~l~s~~~D~~ 572 (577)
T 2ymu_A 529 DK-TVKLWNRNGQLLQTL---TGHSSSV----WGVAFSPDGQTIASASSDKT 572 (577)
T ss_dssp TS-EEEEECTTSCEEEEE---ECCSSCE----EEEEECTTSSCEEEEETTSC
T ss_pred cC-EEEEEeCCCCEEEEE---cCCCCCE----EEEEEcCCCCEEEEEeCCCE
Confidence 64 799999654433222 1111111 12334556777777776553
No 207
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.08 E-value=1.9 Score=42.84 Aligned_cols=226 Identities=8% Similarity=-0.076 Sum_probs=110.0
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEE-----eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeC-C--CC--
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-----SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRA-P--DM-- 202 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-----~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~-~--~~-- 202 (428)
.+.+||+.+.+-..+..++.. ..-..++.. +|..+|+..-. ...+.++|..|.+=... + .+
T Consensus 219 ~V~viD~~~~t~~~v~~i~~G---~~P~~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t~~~~~~i~~~~~~~ 289 (567)
T 1qks_A 219 KVNMIDLWMKEPTTVAEIKIG---SEARSIETSKMEGWEDKYAIAGAYW------PPQYVIMDGETLEPKKIQSTRGMTY 289 (567)
T ss_dssp EEEEEETTSSSCCEEEEEECC---SEEEEEEECCSTTCTTTEEEEEEEE------TTEEEEEETTTCCEEEEEECCEECT
T ss_pred eEEEEECCCCCCcEeEEEecC---CCCceeEEccccCCCCCEEEEEEcc------CCeEEEEECCCCcEEEEEecccccc
Confidence 688889852222222222221 112345555 56567776433 34688999877653321 1 11
Q ss_pred ------CcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEE-EECCEEEEEecCCC
Q 014222 203 ------LRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGV-VYEGKWFLKGLGSH 275 (428)
Q Consensus 203 ------~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~g~lyv~Gg~~~ 275 (428)
+.+|.....+..++..+++--. ....+...|..+.....+..++..+..+... .-+|+.+++....
T Consensus 290 ~~~~~~p~~rva~i~~s~~~~~~vv~~~------~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~- 362 (567)
T 1qks_A 290 DEQEYHPEPRVAAILASHYRPEFIVNVK------ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA- 362 (567)
T ss_dssp TTCCEESCCCEEEEEECSSSSEEEEEET------TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG-
T ss_pred ccccccCCCceEEEEEcCCCCEEEEEec------CCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC-
Confidence 1223222222223333333211 1257888888776544443333344434333 2356644333211
Q ss_pred CceeEEEEeCCCCCeEec----CCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCC-----ceeeCcccccccC
Q 014222 276 RQVLSEAYQPETDSWFPV----YDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTD-----SWSKHIDSKMHLG 344 (428)
Q Consensus 276 ~~~~i~~yd~~~~~W~~~----~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~-----~W~~v~~~~~~~~ 344 (428)
...+.++|.++++=... ...|.+++. ..... .+.+|+........|.++|..+. .|+.+..++....
T Consensus 363 -sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g-~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~ 440 (567)
T 1qks_A 363 -RNKLVVIDTKEGKLVAIEDTGGQTPHPGRG-ANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGG 440 (567)
T ss_dssp -GTEEEEEETTTTEEEEEEECSSSSBCCTTC-EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS
T ss_pred -CCeEEEEECCCCcEEEEEeccCcCCCCccc-eeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCC
Confidence 23477899998863322 111211111 11233 36788876444457999987763 3998877653311
Q ss_pred CcccccceEEEEe-CCeEEEEeC-C-C--eEEEEEeecCCC
Q 014222 345 NSRALEAAALVPL-NGKLCIIRN-N-M--SISLVDVSKSNG 380 (428)
Q Consensus 345 ~~~~~~~~~~~~~-~~~lyv~GG-~-~--~~~~v~~yd~~~ 380 (428)
.. .+..... +..+|+--- . + ..+.|.+||..+
T Consensus 441 g~----~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 441 GS----LFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp CC----CCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred CC----EEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 10 1122223 346888542 1 1 134688999877
No 208
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=94.07 E-value=3.2 Score=37.32 Aligned_cols=217 Identities=7% Similarity=-0.021 Sum_probs=95.5
Q ss_pred eEEEEeCCCCceEe-CCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceee
Q 014222 133 SWHAFDPIYQLWQP-LPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGS 211 (428)
Q Consensus 133 ~~~~yd~~~~~W~~-l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~ 211 (428)
.+.+||..+++-.. +.... ..-.+++...++.+++.|+.++ .+.+||.....-..+.... ..-..+
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~s~D~------~i~vwd~~~~~~~~~~~h~--~~v~~~ 154 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHK-----SDVMSVDIDKKASMIISGSRDK------TIKVWTIKGQCLATLLGHN--DWVSQV 154 (319)
T ss_dssp EEEEEETTTTEEEEEEECCS-----SCEEEEEECTTSCEEEEEETTS------CEEEEETTSCEEEEECCCS--SCEEEE
T ss_pred EEEEEECCCCCeeEEEccCC-----CcEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCeEEEEeccC--CcEEEE
Confidence 68889988775321 11111 1123333433335777777553 4777887654332221110 000111
Q ss_pred EEE-------CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEE
Q 014222 212 CVI-------NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEA 282 (428)
Q Consensus 212 ~~~-------~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~ 282 (428)
... ++..++.|+.+ ..+..||..+.+-... +.........+.+ ++++.+.|+.+ ..+..
T Consensus 155 ~~~~~~~~~~~~~~l~s~~~d-------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~d---g~i~i 222 (319)
T 3frx_A 155 RVVPNEKADDDSVTIISAGND-------KMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKD---GEIML 222 (319)
T ss_dssp EECCC------CCEEEEEETT-------SCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETT---CEEEE
T ss_pred EEccCCCCCCCccEEEEEeCC-------CEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCC---CeEEE
Confidence 111 23355556643 5788899877643221 1111111112222 66766666543 24678
Q ss_pred EeCCCCCeEecCCCCcCCCCCceEE-ECCeEEEEEccCCcEEEEEeCCCCc-eeeCcccccccC-CcccccceEEEEeCC
Q 014222 283 YQPETDSWFPVYDGMVAGWRNPSAS-LNRHLYALDCKDGCKIRVYDEVTDS-WSKHIDSKMHLG-NSRALEAAALVPLNG 359 (428)
Q Consensus 283 yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~i~~yd~~~~~-W~~v~~~~~~~~-~~~~~~~~~~~~~~~ 359 (428)
||..+.+=...-... ..-...+. -++.+++.+.. ..+.+|+.+... ...+........ .........+...++
T Consensus 223 wd~~~~~~~~~~~~~--~~v~~~~~sp~~~~la~~~~--~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg 298 (319)
T 3frx_A 223 WNLAAKKAMYTLSAQ--DEVFSLAFSPNRYWLAAATA--TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADG 298 (319)
T ss_dssp EETTTTEEEEEEECC--SCEEEEEECSSSSEEEEEET--TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTS
T ss_pred EECCCCcEEEEecCC--CcEEEEEEcCCCCEEEEEcC--CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCC
Confidence 888766422111101 10011121 24555555543 346677665442 111111000000 000001123445578
Q ss_pred eEEEEeCCCeEEEEEeecCCC
Q 014222 360 KLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 360 ~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+.++.|+.++. +.+||..+
T Consensus 299 ~~l~sg~~Dg~--i~vWd~~t 317 (319)
T 3frx_A 299 QTLFAGYTDNV--IRVWQVMT 317 (319)
T ss_dssp SEEEEEETTSC--EEEEEEEE
T ss_pred CEEEEeecCce--EEEEEEee
Confidence 88888887653 44565543
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.04 E-value=4.1 Score=38.42 Aligned_cols=152 Identities=13% Similarity=0.037 Sum_probs=83.5
Q ss_pred cEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEE
Q 014222 160 FGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEV 237 (428)
Q Consensus 160 ~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~ 237 (428)
+++++..+++||+.... ...+.++|+.++.-..+.... ...+ .++. ++.||+..... ...++.
T Consensus 134 ~~la~d~~g~lyv~d~~------~~~I~~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~------~~~I~~ 198 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRD------DPRVRLISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEG------THTVYV 198 (409)
T ss_dssp EEEEECSTTEEEEEETT------TTEEEEEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSST------TCEEEE
T ss_pred eEEEEeCCCCEEEEecC------CCcEEEEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCC------CceEEE
Confidence 45555444489998542 347999999987755543221 1112 2222 34677765422 127899
Q ss_pred EeCCCCc-eEEcCCC-C-CCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecCC---CCcCCCC-C-ceEE
Q 014222 238 YDPNKNR-WSFISDM-S-TAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYD---GMVAGWR-N-PSAS 307 (428)
Q Consensus 238 yd~~t~~-W~~~~~~-p-~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~---~~~~~~~-~-~~~~ 307 (428)
+|+.+.. ...+... + .......+++. ++.||+... ...+++||+.+.....+.. ....... . ..++
T Consensus 199 ~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~----~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~ 274 (409)
T 3hrp_A 199 YMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS----NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIY 274 (409)
T ss_dssp EEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT----TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEE
T ss_pred EEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC----CCcEEEEECCCCCEEEEecccccCCCCCCccccEEE
Confidence 9987653 2233111 1 11111223322 689999432 2358899998877555411 1111222 1 3333
Q ss_pred E--CCeEEEEEccCCcEEEEEeCCCC
Q 014222 308 L--NRHLYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 308 ~--~~~lyv~gG~~~~~i~~yd~~~~ 331 (428)
. ++.||+....+ ..|++||++..
T Consensus 275 ~p~~g~lyv~d~~~-~~I~~~~~~g~ 299 (409)
T 3hrp_A 275 YFVDSNFYMSDQNL-SSVYKITPDGE 299 (409)
T ss_dssp ETTTTEEEEEETTT-TEEEEECTTCC
T ss_pred eCCCCEEEEEeCCC-CEEEEEecCCC
Confidence 3 58999987544 58999998765
No 210
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.03 E-value=3 Score=36.87 Aligned_cols=218 Identities=9% Similarity=-0.014 Sum_probs=96.8
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCC-CcCCcceee
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDM-LRRRHFFGS 211 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~-~~~r~~~~~ 211 (428)
.+.++|..+++-....... ..........+ .+++.|+.+ ..+..++..+......... .........
T Consensus 90 ~v~iw~~~~~~~~~~~~~h-----~~~~~~~~~~~-~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSH-----SARVGSLSWNS-YILSSGSRS------GHIHHHDVRVAEHHVATLSGHSQEVCGLR 157 (318)
T ss_dssp EEEEEETTTTEEEEEEECC-----SSCEEEEEEET-TEEEEEETT------SEEEEEETTSSSCEEEEEECCSSCEEEEE
T ss_pred cEEEeecCCceeEEEecCc-----cceEEEeecCC-CEEEEEecC------CceEeeecCCCceeEEEEcCccCceEEEE
Confidence 6778888877643221111 11222333445 466666543 2455555554432211100 011111112
Q ss_pred EEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEc--CCCCCCccc-eEEEEE--CCEE-EEEecCCCCceeEEEEeC
Q 014222 212 CVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFI--SDMSTAMVP-FIGVVY--EGKW-FLKGLGSHRQVLSEAYQP 285 (428)
Q Consensus 212 ~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~--~~~p~~~~~-~~~~~~--~g~l-yv~Gg~~~~~~~i~~yd~ 285 (428)
...+++.++.|+.+ ..+.+||..+.+-... ......... ...+.. ++.+ ++.+|.. ...+..+|.
T Consensus 158 ~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~i~lwd~ 228 (318)
T 4ggc_A 158 WAPDGRHLASGGND-------NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS--DRHIRIWNV 228 (318)
T ss_dssp ECTTSSEEEEEETT-------SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT--TCEEEEEET
T ss_pred EcCCCCEEEEEecC-------cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC--CCEEEEEec
Confidence 22245566666653 4788899876542111 111111111 111111 2333 3333332 224567887
Q ss_pred CCCCeEecCCCCcCCCCCceEE-ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEE
Q 014222 286 ETDSWFPVYDGMVAGWRNPSAS-LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCII 364 (428)
Q Consensus 286 ~~~~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~ 364 (428)
....-......... ....... .++.+++..|.....|.+||..+.+ .+..+..+.... .......++++++.
T Consensus 229 ~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~--~~~~l~gH~~~V----~~l~~spdg~~l~S 301 (318)
T 4ggc_A 229 CSGACLSAVDAHSQ-VCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--KVAELKGHTSRV----LSLTMSPDGATVAS 301 (318)
T ss_dssp TTCCEEEEEECSSC-EEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--EEEEECCCSSCE----EEEEECTTSSCEEE
T ss_pred ccccccccccceee-eeeeeecccccceEEEEEcCCCEEEEEECCCCc--EEEEEcCCCCCE----EEEEEcCCCCEEEE
Confidence 76654433221111 0011111 2455666666555689999987653 333332221111 12233456788888
Q ss_pred eCCCeEEEEEeecCCC
Q 014222 365 RNNMSISLVDVSKSNG 380 (428)
Q Consensus 365 GG~~~~~~v~~yd~~~ 380 (428)
||.++. |.+||...
T Consensus 302 ~s~D~~--v~iWd~~~ 315 (318)
T 4ggc_A 302 AAADET--LRLWRCFE 315 (318)
T ss_dssp EETTTE--EEEECCSC
T ss_pred EecCCe--EEEEECCC
Confidence 887664 44566543
No 211
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.98 E-value=3.4 Score=37.23 Aligned_cols=149 Identities=5% Similarity=0.017 Sum_probs=74.0
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE-C---CEEEEEccccCCCCCCCCeEEEEeCCCCc
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI-N---NCLYVAGGENGGVHRSLRSAEVYDPNKNR 244 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~v~~yd~~t~~ 244 (428)
.+++.|+... ....+.+||..+++............-..++.. + +.+++.|+.+ ..+.+||..+.+
T Consensus 32 ~l~~~~s~~~---~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~ 101 (357)
T 3i2n_A 32 KFVTMGNFAR---GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG-------GNLHIWNLEAPE 101 (357)
T ss_dssp EEEEEEC--C---CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT-------SCEEEECTTSCS
T ss_pred eEEEecCccC---CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC-------CeEEEEeCCCCC
Confidence 5666665421 134788899888775543222111111122222 2 4667777654 478889988764
Q ss_pred --eEEcCCCCCCccceEEE-------EECCEEEEEecCCCCceeEEEEeCCCCC--eEecCCCCcCCC-CCceEE-----
Q 014222 245 --WSFISDMSTAMVPFIGV-------VYEGKWFLKGLGSHRQVLSEAYQPETDS--WFPVYDGMVAGW-RNPSAS----- 307 (428)
Q Consensus 245 --W~~~~~~p~~~~~~~~~-------~~~g~lyv~Gg~~~~~~~i~~yd~~~~~--W~~~~~~~~~~~-~~~~~~----- 307 (428)
-..+....... ..+. .-++.+.+.|+.+. .+..||..+.. ...+........ ....+.
T Consensus 102 ~~~~~~~~~~~~v--~~~~~~~~~~~s~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 102 MPVYSVKGHKEII--NAIDGIGGLGIGEGAPEIVTGSRDG---TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp SCSEEECCCSSCE--EEEEEESGGGCC-CCCEEEEEETTS---CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred ccEEEEEecccce--EEEeeccccccCCCccEEEEEeCCC---eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 22222111111 1111 12455566665422 46789987764 333322111111 111222
Q ss_pred -ECCeEEEEEccCCcEEEEEeCCCCce
Q 014222 308 -LNRHLYALDCKDGCKIRVYDEVTDSW 333 (428)
Q Consensus 308 -~~~~lyv~gG~~~~~i~~yd~~~~~W 333 (428)
-++.+++.|+.++ .|.+||..+.+-
T Consensus 177 ~~~~~~l~~~~~d~-~i~i~d~~~~~~ 202 (357)
T 3i2n_A 177 NQEERVVCAGYDNG-DIKLFDLRNMAL 202 (357)
T ss_dssp C-CCCEEEEEETTS-EEEEEETTTTEE
T ss_pred CCCCCEEEEEccCC-eEEEEECccCce
Confidence 3677777776654 899999988764
No 212
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.96 E-value=0.43 Score=42.99 Aligned_cols=138 Identities=14% Similarity=0.073 Sum_probs=68.7
Q ss_pred ceEEEEECCCCceeeCCCCCcCC-cceeeEE-ECC-EEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCC----cc
Q 014222 184 RRVIFYSARTNKWHRAPDMLRRR-HFFGSCV-INN-CLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTA----MV 256 (428)
Q Consensus 184 ~~v~~yd~~t~~W~~~~~~~~~r-~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~----~~ 256 (428)
..+.++|..+.+-...-.++... ....++. -++ .+|+.+..+ ..+.+||+.+.+-...-..+.. ..
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-------ESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-------TEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-------CeEEEEECCCCCeEeeEEcCCccccccc
Confidence 47899999887644322222210 0112222 244 677776532 5799999988764321111110 01
Q ss_pred ceEEEE-ECC-EEEEEecC-----CC---CceeEEEEeCCCCCeEecCCCCcCCCCCceEE-ECCe-EEEEEccCCcEEE
Q 014222 257 PFIGVV-YEG-KWFLKGLG-----SH---RQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS-LNRH-LYALDCKDGCKIR 324 (428)
Q Consensus 257 ~~~~~~-~~g-~lyv~Gg~-----~~---~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~-lyv~gG~~~~~i~ 324 (428)
...++. -+| .+|+.... .. ....+..||+.+.+....-... ......+. -+++ ||+.+ ..++
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~----~~i~ 157 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLG----RDLH 157 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEES----SSEE
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEeC----CeEE
Confidence 112222 245 67776311 10 1245889999877654322111 11112222 2444 66662 4699
Q ss_pred EEeCCCCcee
Q 014222 325 VYDEVTDSWS 334 (428)
Q Consensus 325 ~yd~~~~~W~ 334 (428)
+||.++.+-.
T Consensus 158 ~~d~~~~~~~ 167 (337)
T 1pby_B 158 VMDPEAGTLV 167 (337)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCcEe
Confidence 9999877543
No 213
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.96 E-value=4.4 Score=38.45 Aligned_cols=152 Identities=7% Similarity=-0.100 Sum_probs=74.0
Q ss_pred CEEEEEeeeCCCCCCCceEEEEECCCCceeeC-CCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceE
Q 014222 168 CHLYLFGGKDPLKGSMRRVIFYSARTNKWHRA-PDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWS 246 (428)
Q Consensus 168 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~-~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~ 246 (428)
+..++.|+.+ ..+.+||..+.+.... ..-........... ++++++.|+.+ ..+.+||..+.+-.
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d-------~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD-------DKIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS-------SEEEEEETTTCCEE
T ss_pred CcEEEEEcCC------CcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC-------CeEEEEECCCCcEe
Confidence 4677777754 2588888877653321 10011111111222 67777777753 58899999887542
Q ss_pred EcCCCC-----------------------CCccceEEEEE--CCEEEEEecCCCCceeEEEEeC---CCCCeEecCCCCc
Q 014222 247 FISDMS-----------------------TAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQP---ETDSWFPVYDGMV 298 (428)
Q Consensus 247 ~~~~~p-----------------------~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~---~~~~W~~~~~~~~ 298 (428)
..-... ........... ++++.++++... ..+..||. ...++..+.....
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d--~~i~iw~~~~~~~~~l~~~~~~~~ 353 (450)
T 2vdu_B 276 STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT--KCIIILEMSEKQKGDLALKQIITF 353 (450)
T ss_dssp EEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC--SEEEEEEECSSSTTCEEEEEEEEC
T ss_pred eeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC--CeEEEEEeccCCCCceeeccEecc
Confidence 211100 00011111122 354444443222 23567776 3345555433222
Q ss_pred CCCCCceEEECCeEEEEEccC------Cc--EEEEEeCCCCceee
Q 014222 299 AGWRNPSASLNRHLYALDCKD------GC--KIRVYDEVTDSWSK 335 (428)
Q Consensus 299 ~~~~~~~~~~~~~lyv~gG~~------~~--~i~~yd~~~~~W~~ 335 (428)
...-...+...+.+++..+.. .+ .++.++.+++.|..
T Consensus 354 ~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~~ 398 (450)
T 2vdu_B 354 PYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVV 398 (450)
T ss_dssp SSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEEE
T ss_pred CCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEEE
Confidence 111112334567777776432 12 57777888888863
No 214
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.77 E-value=4.1 Score=37.67 Aligned_cols=177 Identities=11% Similarity=0.093 Sum_probs=87.6
Q ss_pred eEEEEECCCCceeeCC--CCCcCCcc-e-eeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCC--ceEEcCCCCCCcc
Q 014222 185 RVIFYSARTNKWHRAP--DMLRRRHF-F-GSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWSFISDMSTAMV 256 (428)
Q Consensus 185 ~v~~yd~~t~~W~~~~--~~~~~r~~-~-~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~~~ 256 (428)
.+.+||..+++-...- ..+..... . .+.. .++.+++.|+.+ ..+.+||.... .-..+..-. ...
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-------~~v~~wd~~~~~~~~~~~~~h~-~~v 252 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-------TTVRLWDLRITSRAVRTYHGHE-GDI 252 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-------SCEEEEETTTTCCCCEEECCCS-SCC
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-------CeEEEEECCCCCcceEEECCcC-CCe
Confidence 5788898877643321 11111111 1 1122 256788888765 57889998632 112221111 111
Q ss_pred ceEEEE-ECCEEEEEecCCCCceeEEEEeCCCCCeEecCC-CCcC-C-C--CCceEE--ECCeEEEEEccCCcEEEEEeC
Q 014222 257 PFIGVV-YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYD-GMVA-G-W--RNPSAS--LNRHLYALDCKDGCKIRVYDE 328 (428)
Q Consensus 257 ~~~~~~-~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~-~~~~-~-~--~~~~~~--~~~~lyv~gG~~~~~i~~yd~ 328 (428)
..++. -++..++.|+.+. .+..||..++.-...-. .... . . ...++. .++++.+.|+.++ .|.+||.
T Consensus 253 -~~v~~~p~~~~l~s~s~D~---~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg-~i~vwd~ 327 (380)
T 3iz6_a 253 -NSVKFFPDGQRFGTGSDDG---TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG-DCYVWDT 327 (380)
T ss_dssp -CEEEECTTSSEEEEECSSS---CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS-CEEEEET
T ss_pred -EEEEEecCCCeEEEEcCCC---eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC-CEEEEEC
Confidence 12222 2566666666432 36788988765332211 1110 0 0 011222 3677777776654 8999998
Q ss_pred CCCceee-Cccccc-ccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 329 VTDSWSK-HIDSKM-HLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 329 ~~~~W~~-v~~~~~-~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.+.+-.. +..+.. .... ..+.....+++.++.|+.++.- .+|+...
T Consensus 328 ~~~~~~~~~~~~~~~h~~~----v~~l~~s~dg~~l~sgs~D~~i--~iW~~~~ 375 (380)
T 3iz6_a 328 LLAEMVLNLGTLQNSHEGR----ISCLGLSSDGSALCTGSWDKNL--KIWAFSG 375 (380)
T ss_dssp TTCCEEEEECCSCSSCCCC----CCEEEECSSSSEEEEECTTSCE--EEEECCS
T ss_pred CCCceEEEEecccCCCCCc----eEEEEECCCCCEEEEeeCCCCE--EEEecCC
Confidence 7665332 211111 1111 1233455678888888877644 4455444
No 215
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.77 E-value=1.3 Score=41.87 Aligned_cols=172 Identities=12% Similarity=0.060 Sum_probs=89.7
Q ss_pred eEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCC----ce-EEcCCCCCCccc
Q 014222 185 RVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKN----RW-SFISDMSTAMVP 257 (428)
Q Consensus 185 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~----~W-~~~~~~p~~~~~ 257 (428)
.+.++++.+..+..+.+ ......++++. +++||+.--. ...+.++++... .. ..+.... ...
T Consensus 93 ~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~-------~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p 161 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRDI--QAP 161 (400)
T ss_dssp EEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETT-------TTEEEEEEC------CCCEEEECSSC--SCE
T ss_pred eeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecC-------CCeEEEEEcccCCCCCcceEEEeCCC--CCc
Confidence 56666666665554422 11222334443 6899997432 257888888752 12 2222111 111
Q ss_pred eEEEE--ECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCc--eEE--ECCeEEEEEccCCcEEEEEeCCCC
Q 014222 258 FIGVV--YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNP--SAS--LNRHLYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 258 ~~~~~--~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~--~~~--~~~~lyv~gG~~~~~i~~yd~~~~ 331 (428)
...++ .++.||+.-.. ...|+++|+....-+.+.. .....+ .++ .++.||+........|++++++..
T Consensus 162 ~glavD~~~~~lY~~d~~---~~~I~~~~~~g~~~~~l~~---~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSV---LGTVSVADTKGVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp EEEEEETTTTEEEEEETT---TTEEEEECTTTCSEEEEEE---CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred ccEEEEecCCceEEEECC---CCeEEEEeCCCCceEEEEe---CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 22333 37899998543 2357889987665544432 111112 233 368999987433358999998865
Q ss_pred ceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 332 SWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 332 ~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.=..+... ....+ .+.++-..+++||+.-.. ...|+++|.+.
T Consensus 236 ~~~~~~~~--~l~~P---~glavd~~~~~lY~aD~~--~~~I~~~d~dG 277 (400)
T 3p5b_L 236 DIYSLVTE--NIQWP---NGITLDLLSGRLYWVDSK--LHSISSIDVNG 277 (400)
T ss_dssp SCEEEECS--SCSCE---EEEEEETTTTEEEEEETT--TTEEEEEETTS
T ss_pred ccEEEEEC--CCCce---EEEEEEeCCCEEEEEECC--CCEEEEEeCCC
Confidence 43333211 11112 122222347899998543 23567777665
No 216
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=93.76 E-value=1.4 Score=41.80 Aligned_cols=151 Identities=8% Similarity=0.061 Sum_probs=71.0
Q ss_pred cEEEEEeCCE-EEEEeeeCCCCCCCceEEEEECCCCc---eee--CCCCCcCC-cceeeEEE--CCEEEEEccccCCCCC
Q 014222 160 FGCAVLSGCH-LYLFGGKDPLKGSMRRVIFYSARTNK---WHR--APDMLRRR-HFFGSCVI--NNCLYVAGGENGGVHR 230 (428)
Q Consensus 160 ~~~~~~~~~~-lyv~GG~~~~~~~~~~v~~yd~~t~~---W~~--~~~~~~~r-~~~~~~~~--~~~iyv~GG~~~~~~~ 230 (428)
.+++....+. +++.|+.++ .+.+||..+.. +.. ...+.... .-..++.. ++.+++.|+.+
T Consensus 185 ~~l~~~~~~~~~l~s~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d----- 253 (430)
T 2xyi_A 185 YGLSWNPNLNGYLLSASDDH------TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD----- 253 (430)
T ss_dssp CCEEECTTSTTEEEEECTTS------CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----
T ss_pred EEEEeCCCCCCeEEEEeCCC------eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----
Confidence 3444433223 666666542 58889987632 211 11111111 11122222 45677777653
Q ss_pred CCCeEEEEeCCCCc-eEEcCCCCCCccceEEEEE--CCE-EEEEecCCCCceeEEEEeCCCCC--eEecCCCCcCCCCCc
Q 014222 231 SLRSAEVYDPNKNR-WSFISDMSTAMVPFIGVVY--EGK-WFLKGLGSHRQVLSEAYQPETDS--WFPVYDGMVAGWRNP 304 (428)
Q Consensus 231 ~~~~v~~yd~~t~~-W~~~~~~p~~~~~~~~~~~--~g~-lyv~Gg~~~~~~~i~~yd~~~~~--W~~~~~~~~~~~~~~ 304 (428)
..+.+||..+.. ...+..+.........+.. ++. +++.|+... .+..||..+.. -..+.. ......
T Consensus 254 --g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg---~v~vwd~~~~~~~~~~~~~---h~~~v~ 325 (430)
T 2xyi_A 254 --QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK---TVALWDLRNLKLKLHSFES---HKDEIF 325 (430)
T ss_dssp --SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS---EEEEEETTCTTSCSEEEEC---CSSCEE
T ss_pred --CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC---eEEEEeCCCCCCCeEEeec---CCCCEE
Confidence 588999998752 1111111111111222233 343 677776432 46789887632 111111 000111
Q ss_pred eEEE---CCeEEEEEccCCcEEEEEeCCC
Q 014222 305 SASL---NRHLYALDCKDGCKIRVYDEVT 330 (428)
Q Consensus 305 ~~~~---~~~lyv~gG~~~~~i~~yd~~~ 330 (428)
.+.+ +..+++.++.++ .|.+||...
T Consensus 326 ~i~~sp~~~~~l~s~~~d~-~i~iwd~~~ 353 (430)
T 2xyi_A 326 QVQWSPHNETILASSGTDR-RLHVWDLSK 353 (430)
T ss_dssp EEEECSSCTTEEEEEETTS-CCEEEEGGG
T ss_pred EEEECCCCCCEEEEEeCCC-cEEEEeCCC
Confidence 2222 335788887664 788898876
No 217
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.62 E-value=4.1 Score=37.01 Aligned_cols=234 Identities=10% Similarity=0.082 Sum_probs=115.5
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
.+.+|+.|.. ..++.-.-.-.+|+.+...... ......+++...+ .+|+.|. . ..+++-+-.-.+|+
T Consensus 46 ~~~~~~~G~~----g~i~~s~DgG~tW~~~~~~~~~-~~~~~~~i~~~~~-~~~~~g~-~------g~i~~S~DgG~tW~ 112 (327)
T 2xbg_A 46 RHHGWLVGVN----ATLMETRDGGQTWEPRTLVLDH-SDYRFNSVSFQGN-EGWIVGE-P------PIMLHTTDGGQSWS 112 (327)
T ss_dssp SSCEEEEETT----TEEEEESSTTSSCEECCCCCSC-CCCEEEEEEEETT-EEEEEEE-T------TEEEEESSTTSSCE
T ss_pred CCcEEEEcCC----CeEEEeCCCCCCCeECCCCCCC-CCccEEEEEecCC-eEEEEEC-C------CeEEEECCCCCCce
Confidence 4556666521 1344444445689988542211 0112334444444 7888752 2 13444332346899
Q ss_pred eCCCCC-cCCcceeeE-EECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE-CCEEEEEecCC
Q 014222 198 RAPDML-RRRHFFGSC-VINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY-EGKWFLKGLGS 274 (428)
Q Consensus 198 ~~~~~~-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~g~lyv~Gg~~ 274 (428)
.+.... .+.....++ .-++.+|+.+.. ..+++-+=.-.+|+.+...... ....++.. ++++|++|...
T Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--------g~v~~S~DgG~tW~~~~~~~~~-~~~~~~~~~~~~~~~~g~~G 183 (327)
T 2xbg_A 113 QIPLDPKLPGSPRLIKALGNGSAEMITNV--------GAIYRTKDSGKNWQALVQEAIG-VMRNLNRSPSGEYVAVSSRG 183 (327)
T ss_dssp ECCCCTTCSSCEEEEEEEETTEEEEEETT--------CCEEEESSTTSSEEEEECSCCC-CEEEEEECTTSCEEEEETTS
T ss_pred ECccccCCCCCeEEEEEECCCCEEEEeCC--------ccEEEEcCCCCCCEEeecCCCc-ceEEEEEcCCCcEEEEECCC
Confidence 876431 122223333 346788887642 1344433345689988643222 22233322 56777765321
Q ss_pred CCceeEEEE-eCCCCCeEecCCCCcCCCCCceEE-ECCeEEEEEccCCcEEEEEeCC-CCceeeCcccccccCCcccccc
Q 014222 275 HRQVLSEAY-QPETDSWFPVYDGMVAGWRNPSAS-LNRHLYALDCKDGCKIRVYDEV-TDSWSKHIDSKMHLGNSRALEA 351 (428)
Q Consensus 275 ~~~~~i~~y-d~~~~~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~i~~yd~~-~~~W~~v~~~~~~~~~~~~~~~ 351 (428)
.++.- |..-.+|+.+..... ......+. -++.+|+++. .+ .++..+.+ ..+|+.+.......... -
T Consensus 184 ----~~~~S~d~gG~tW~~~~~~~~-~~~~~~~~~~~g~~~~~~~-~G-~~~~s~~D~G~tW~~~~~~~~~~~~~----~ 252 (327)
T 2xbg_A 184 ----SFYSTWEPGQTAWEPHNRTTS-RRLHNMGFTPDGRLWMIVN-GG-KIAFSDPDNSENWGELLSPLRRNSVG----F 252 (327)
T ss_dssp ----SEEEEECTTCSSCEEEECCSS-SCEEEEEECTTSCEEEEET-TT-EEEEEETTEEEEECCCBCTTSSCCSC----E
T ss_pred ----cEEEEeCCCCCceeECCCCCC-CccceeEECCCCCEEEEeC-Cc-eEEEecCCCCCeeEeccCCcccCCcc----e
Confidence 12333 333678998854222 11112222 3678887764 22 46666433 67899875310111100 1
Q ss_pred eEEE-EeCCeEEEEeCCCeEEEEEeecCCCCCCCccccccceec
Q 014222 352 AALV-PLNGKLCIIRNNMSISLVDVSKSNGERGASAEHLWETIS 394 (428)
Q Consensus 352 ~~~~-~~~~~lyv~GG~~~~~~v~~yd~~~~~~~~~~~~W~~~~ 394 (428)
..+. ..++.+|+.|+... +..-.-.. .+|+.+.
T Consensus 253 ~~v~~~~~~~~~~~g~~g~---i~~S~DgG-------~tW~~~~ 286 (327)
T 2xbg_A 253 LDLAYRTPNEVWLAGGAGA---LLCSQDGG-------QTWQQDV 286 (327)
T ss_dssp EEEEESSSSCEEEEESTTC---EEEESSTT-------SSCEECG
T ss_pred EEEEecCCCEEEEEeCCCe---EEEeCCCC-------cccEEcC
Confidence 2232 23678999887543 22222223 7898876
No 218
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=93.60 E-value=3.5 Score=36.88 Aligned_cols=198 Identities=12% Similarity=0.200 Sum_probs=96.4
Q ss_pred EEEEeCCCCc-eEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECC-CCceeeCCCCCcCCcceee
Q 014222 134 WHAFDPIYQL-WQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSAR-TNKWHRAPDMLRRRHFFGS 211 (428)
Q Consensus 134 ~~~yd~~~~~-W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~~~~~r~~~~~ 211 (428)
+++||+..+. |..-. +.. .....++.++ .||+.. . ...++.||+. ...|+...... ...+.
T Consensus 80 l~~~d~~g~~~~~~~~--~~~----~~~~~~~~~~-~l~v~t-~------~~~l~~~d~~g~~~~~~~~~~~---~~~~~ 142 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDT--KKA----IVSDFTIFED-ILYVTS-M------DGHLYAINTDGTEKWRFKTKKA---IYATP 142 (330)
T ss_dssp EEEECCCGGGGGGSCC-----------CCEEEETT-EEEEEC-T------TSEEEEECTTSCEEEEEECSSC---CCSCC
T ss_pred EEEECCCCcEEEEEEC--CCC----cccCceEECC-EEEEEe-c------CCEEEEEcCCCCEEEEEcCCCc---eeeee
Confidence 8889974322 43221 111 1112333455 777642 1 2368889987 33465432211 11223
Q ss_pred EEE-CCEEEEEccccCCCCCCCCeEEEEeCCCC-ceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCC-C
Q 014222 212 CVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKN-RWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPET-D 288 (428)
Q Consensus 212 ~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~-~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~-~ 288 (428)
+.. ++.||+. ..+ ..+.+||+... .|..-.+ .......+..-+|.||+.. ..+++||... .
T Consensus 143 ~~~~~g~l~vg-t~~-------~~l~~~d~~g~~~~~~~~~--~~~~~~~~~d~~g~l~v~t------~~l~~~d~~g~~ 206 (330)
T 3hxj_A 143 IVSEDGTIYVG-SND-------NYLYAINPDGTEKWRFKTN--DAITSAASIGKDGTIYFGS------DKVYAINPDGTE 206 (330)
T ss_dssp EECTTSCEEEE-CTT-------SEEEEECTTSCEEEEEECS--SCCCSCCEECTTCCEEEES------SSEEEECTTSCE
T ss_pred EEcCCCEEEEE-cCC-------CEEEEECCCCCEeEEEecC--CCceeeeEEcCCCEEEEEe------CEEEEECCCCcE
Confidence 344 6777773 221 47889998732 3654322 1111112222477888754 2367898432 2
Q ss_pred CeEecCCCCcCCCCCceEEE-CCeEEEEEccCCcEEEEEeCCCCc-eeeCcccccccCCcccccceEEEEeCCeEEEEeC
Q 014222 289 SWFPVYDGMVAGWRNPSASL-NRHLYALDCKDGCKIRVYDEVTDS-WSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRN 366 (428)
Q Consensus 289 ~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~i~~yd~~~~~-W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG 366 (428)
.|+.... . ....+.+.- ++.||+... +..++.||++.+. |..-.. ... . ...+...++.||+...
T Consensus 207 ~~~~~~~--~-~~~~~~~~~~~g~l~v~t~--~~gl~~~~~~g~~~~~~~~~--~~~--~----~~~~~~~~g~l~v~t~ 273 (330)
T 3hxj_A 207 KWNFYAG--Y-WTVTRPAISEDGTIYVTSL--DGHLYAINPDGTEKWRFKTG--KRI--E----SSPVIGNTDTIYFGSY 273 (330)
T ss_dssp EEEECCS--S-CCCSCCEECTTSCEEEEET--TTEEEEECTTSCEEEEEECS--SCC--C----SCCEECTTSCEEEECT
T ss_pred EEEEccC--C-cceeceEECCCCeEEEEcC--CCeEEEECCCCCEeEEeeCC--CCc--c----ccceEcCCCeEEEecC
Confidence 4665432 1 111222333 568887642 2478899876554 543211 111 1 1222333788887543
Q ss_pred CCeEEEEEeecCCC
Q 014222 367 NMSISLVDVSKSNG 380 (428)
Q Consensus 367 ~~~~~~v~~yd~~~ 380 (428)
.. .+..||++.
T Consensus 274 ~g---gl~~~d~~g 284 (330)
T 3hxj_A 274 DG---HLYAINPDG 284 (330)
T ss_dssp TC---EEEEECTTS
T ss_pred CC---CEEEECCCC
Confidence 32 366788744
No 219
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=93.58 E-value=4.5 Score=39.51 Aligned_cols=210 Identities=8% Similarity=0.063 Sum_probs=99.4
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.++|.....-..+..... .-.+++...+++.++.|+.+ ..+.+||.....-..+.. ........
T Consensus 326 ~i~~w~~~~~~~~~~~~~~~-----~v~~~~~s~~g~~l~~~~~d------g~v~~~~~~~~~~~~~~~---~~~~v~~~ 391 (577)
T 2ymu_A 326 TVKLWNRNGQHLQTLTGHSS-----SVWGVAFSPDGQTIASASDD------KTVKLWNRNGQLLQTLTG---HSSSVRGV 391 (577)
T ss_dssp CEEEEETTSCEEEEECCCSS-----CEEEEEECTTSSEEEEEETT------SEEEEEETTCCEEEEEEC---CSSCEEEE
T ss_pred eEEEEeCCCCeeEEEeCCCC-----CEEEEEECCCCCEEEEEeCC------CEEEEEcCCCCEEEEecC---CCCCeEEE
Confidence 45566665554433322111 12334444333566666643 257778854433322211 11111122
Q ss_pred E--ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCe
Q 014222 213 V--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSW 290 (428)
Q Consensus 213 ~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W 290 (428)
. -+++.++.|+.+ ..+.+||.....-..+....... ...+..-++++.+.++.+ ..+..||.....-
T Consensus 392 ~~s~dg~~l~~~~~d-------~~v~~~~~~~~~~~~~~~~~~~v-~~~~~s~d~~~l~~~~~d---~~v~~w~~~~~~~ 460 (577)
T 2ymu_A 392 AFSPDGQTIASASDD-------KTVKLWNRNGQLLQTLTGHSSSV-WGVAFSPDDQTIASASDD---KTVKLWNRNGQLL 460 (577)
T ss_dssp EECTTSSCEEEEETT-------SEEEEECTTCCEEEEEECCSSCE-EEEEECTTSSEEEEEETT---SEEEEEETTSCEE
T ss_pred EECCCCCEEEEEeCC-------CEEEEEeCCCCEEEEecCCCCCe-EEEEECCCCCEEEEEcCC---CEEEEEECCCCEE
Confidence 2 256666666653 47888886544333332211111 111112256666665532 2466788655443
Q ss_pred EecCCCCcCCCCCceEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCC
Q 014222 291 FPVYDGMVAGWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNM 368 (428)
Q Consensus 291 ~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~ 368 (428)
..+.... . ...++. -++++.+.++.++ .|.+||...+.-..+ ....... ....+..++++++.|+.+
T Consensus 461 ~~~~~~~-~--~v~~~~~spd~~~las~~~d~-~i~iw~~~~~~~~~~---~~h~~~v----~~l~~s~dg~~l~s~~~d 529 (577)
T 2ymu_A 461 QTLTGHS-S--SVRGVAFSPDGQTIASASDDK-TVKLWNRNGQLLQTL---TGHSSSV----RGVAFSPDGQTIASASDD 529 (577)
T ss_dssp EEEECCS-S--CEEEEEECTTSCEEEEEETTS-EEEEEETTSCEEEEE---ECCSSCE----EEEEECTTSSCEEEEETT
T ss_pred EEEcCCC-C--CEEEEEEcCCCCEEEEEeCCC-EEEEEcCCCCEEEEE---eCCCCCE----EEEEEcCCCCEEEEEECc
Confidence 3332211 1 111222 3677777777654 789999654332222 2111111 123344567777878766
Q ss_pred eEEEEEeecCCC
Q 014222 369 SISLVDVSKSNG 380 (428)
Q Consensus 369 ~~~~v~~yd~~~ 380 (428)
+ .+.+||...
T Consensus 530 g--~v~lwd~~~ 539 (577)
T 2ymu_A 530 K--TVKLWNRNG 539 (577)
T ss_dssp S--EEEEECTTS
T ss_pred C--EEEEEeCCC
Confidence 5 366777544
No 220
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=93.57 E-value=4 Score=36.69 Aligned_cols=141 Identities=11% Similarity=0.098 Sum_probs=70.1
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceE
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWS 246 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~ 246 (428)
..++.|+.+ ..+.+||..+++-... +.........+.+ ++.+++.|+.+ ..+.+||.....-.
T Consensus 78 ~~l~s~s~D------~~v~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~s~D-------~~i~vwd~~~~~~~ 142 (319)
T 3frx_A 78 AYALSASWD------KTLRLWDVATGETYQR--FVGHKSDVMSVDIDKKASMIISGSRD-------KTIKVWTIKGQCLA 142 (319)
T ss_dssp SEEEEEETT------SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSCEEEEEETT-------SCEEEEETTSCEEE
T ss_pred CEEEEEeCC------CEEEEEECCCCCeeEE--EccCCCcEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCeEE
Confidence 566666654 3688999988753221 1111111111222 45667777764 47888988765433
Q ss_pred EcCCCCCCccceEEEEE-------CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEc
Q 014222 247 FISDMSTAMVPFIGVVY-------EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDC 317 (428)
Q Consensus 247 ~~~~~p~~~~~~~~~~~-------~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG 317 (428)
.+..-.... ..+... ++.+++.|+.+. .+..||..+.+-...- .........+. -++++++.|+
T Consensus 143 ~~~~h~~~v--~~~~~~~~~~~~~~~~~l~s~~~d~---~i~~wd~~~~~~~~~~--~~h~~~v~~~~~sp~g~~l~s~~ 215 (319)
T 3frx_A 143 TLLGHNDWV--SQVRVVPNEKADDDSVTIISAGNDK---MVKAWNLNQFQIEADF--IGHNSNINTLTASPDGTLIASAG 215 (319)
T ss_dssp EECCCSSCE--EEEEECCC------CCEEEEEETTS---CEEEEETTTTEEEEEE--CCCCSCEEEEEECTTSSEEEEEE
T ss_pred EEeccCCcE--EEEEEccCCCCCCCccEEEEEeCCC---EEEEEECCcchhheee--cCCCCcEEEEEEcCCCCEEEEEe
Confidence 332211111 111111 223444454322 3668888765432211 10000111222 2677888887
Q ss_pred cCCcEEEEEeCCCCc
Q 014222 318 KDGCKIRVYDEVTDS 332 (428)
Q Consensus 318 ~~~~~i~~yd~~~~~ 332 (428)
.++ .|.+||..+.+
T Consensus 216 ~dg-~i~iwd~~~~~ 229 (319)
T 3frx_A 216 KDG-EIMLWNLAAKK 229 (319)
T ss_dssp TTC-EEEEEETTTTE
T ss_pred CCC-eEEEEECCCCc
Confidence 764 89999988764
No 221
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.53 E-value=1.7 Score=45.00 Aligned_cols=173 Identities=11% Similarity=0.070 Sum_probs=88.8
Q ss_pred eEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCC----ce-EEcC-CCCCCcc
Q 014222 185 RVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKN----RW-SFIS-DMSTAMV 256 (428)
Q Consensus 185 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~----~W-~~~~-~~p~~~~ 256 (428)
.+..++.....+..+..- .+...++++. +++||+.-.. ...+.++++... .. ..+. .+..+ .
T Consensus 405 ~Ir~i~l~~~~~~~l~~~--~~~~~gl~~d~~~~~lY~sD~~-------~~~I~~~~l~g~~~~~~~~~vi~~~l~~P-~ 474 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRDIQAP-D 474 (791)
T ss_dssp SEEEECTTSCCCEEEECS--CSSEEEEEEETTTTEEEEEETT-------TTEEEEEEC--------CEEEECSSCSCC-C
T ss_pred ceeEeeccCCcceeeecC--CCceEEEeecccCCeeEEeecc-------ceeEEEEeccCCCCCcceeEEEecCCCCc-c
Confidence 455666655555443221 1222233333 6899998543 257888887652 22 2232 12111 1
Q ss_pred ceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCc-e-EE--ECCeEEEEEccCCcEEEEEeCCCCc
Q 014222 257 PFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNP-S-AS--LNRHLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 257 ~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~-~~--~~~~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
+.++-..+++||+.-.. ...|+++|+....-+.+.. .....+ . ++ .++.||+........|++++++...
T Consensus 475 GLAvD~~~~~LY~tD~~---~~~I~v~~ldG~~~~~l~~---~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSV---LGTVSVADTKGVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 548 (791)
T ss_dssp EEEEETTTTEEEEEETT---TTEEEEEETTSSSEEEEEE---CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred eeeeeecCCcEEEEecC---CCeEEEEeCCCCeEEEEEe---CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc
Confidence 11222246799998532 2357899987665544422 111112 3 33 3689999974333589999998765
Q ss_pred eeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 333 WSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 333 W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
-..+... ....+ .+.++-..+++||+.-... ..|+++|++.
T Consensus 549 ~~~lv~~--~l~~P---~GLavD~~~~~LYwaD~~~--~~I~~~d~dG 589 (791)
T 3m0c_C 549 IYSLVTE--NIQWP---NGITLDLLSGRLYWVDSKL--HSISSIDVNG 589 (791)
T ss_dssp EEEEECS--SCSCE---EEEEEETTTTEEEEEETTT--TEEEEEETTS
T ss_pred eEEEEeC--CCCCc---eEEEEecCCCeEEEEeCCC--CcEEEEecCC
Confidence 4444321 11122 1222333578999985432 3466777655
No 222
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=93.47 E-value=7.4 Score=39.51 Aligned_cols=102 Identities=6% Similarity=0.003 Sum_probs=54.9
Q ss_pred eEEEEeCCC-CceEEcCCC-CCCc-cceEEEEECCE-EEEEec-CCCCceeEEEEeCCCCCeEecCCCCcCCC----CCc
Q 014222 234 SAEVYDPNK-NRWSFISDM-STAM-VPFIGVVYEGK-WFLKGL-GSHRQVLSEAYQPETDSWFPVYDGMVAGW----RNP 304 (428)
Q Consensus 234 ~v~~yd~~t-~~W~~~~~~-p~~~-~~~~~~~~~g~-lyv~Gg-~~~~~~~i~~yd~~~~~W~~~~~~~~~~~----~~~ 304 (428)
.+.++|..+ .+-..+... .... ...... -+|+ |++... .......++.+|+.+.+...+........ ...
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 678889888 765444322 1111 112233 4554 444432 22334568999999888766533111111 112
Q ss_pred eEEECCeEEEEEccCC-cEEEEEeCCCCceeeCc
Q 014222 305 SASLNRHLYALDCKDG-CKIRVYDEVTDSWSKHI 337 (428)
Q Consensus 305 ~~~~~~~lyv~gG~~~-~~i~~yd~~~~~W~~v~ 337 (428)
+..-+|++++.+..++ ..+|.+|.+.. ...+.
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECSSSC-EEESC
T ss_pred EECCCCeEEEEecCCCccEEEEEcCCCC-eeeee
Confidence 2234677776665544 47899997766 55553
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=93.46 E-value=4.2 Score=38.89 Aligned_cols=118 Identities=16% Similarity=0.101 Sum_probs=59.5
Q ss_pred CcccceEEEEeeCC----CCceeEEEEeCCC--Cc------eEeCCCCCCCCccccccEE--E--------E--EeCCEE
Q 014222 115 GIAEEWIYVIKRDR----EGKISWHAFDPIY--QL------WQPLPPIPKEYSEALGFGC--A--------V--LSGCHL 170 (428)
Q Consensus 115 ~~~~~~l~v~gg~~----~~~~~~~~yd~~~--~~------W~~l~~~~~~~~~r~~~~~--~--------~--~~~~~l 170 (428)
+..+..+|+..... .....+...|... .+ +..++..... .++++. + . ..+.++
T Consensus 22 ~~~e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde---~HH~gwn~css~~~~~~~~~~~r~~l 98 (462)
T 2ece_A 22 APPEDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVELPYINDE---LHHFGWNACSSALCPNGKPNIERRFL 98 (462)
T ss_dssp SCCCSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEECSSSCCC---BCCCEESCCGGGGSTTCCTTCCSCEE
T ss_pred CCcceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEECCCCCCc---ccccchhhhhhhcccccCCCccCCEE
Confidence 45588999998643 2334566666654 22 2233332211 111111 1 2 345467
Q ss_pred EEEeeeCCCCCCCceEEEEECCCC----ceeeCCC---C----CcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEE
Q 014222 171 YLFGGKDPLKGSMRRVIFYSARTN----KWHRAPD---M----LRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVY 238 (428)
Q Consensus 171 yv~GG~~~~~~~~~~v~~yd~~t~----~W~~~~~---~----~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~y 238 (428)
|+-|.. .+.++++|..++ +-.+.-. + ...+ -|++.. -++ |||..--+. .......+.++
T Consensus 99 ~v~~l~------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~-Ph~~~~~pdG-i~Vs~~g~~-~g~~~g~v~vl 169 (462)
T 2ece_A 99 IVPGLR------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSR-LHTVHCGPDA-IYISALGNE-EGEGPGGILML 169 (462)
T ss_dssp EEEBTT------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEE-EEEEEECSSC-EEEEEEEET-TSCSCCEEEEE
T ss_pred EEccCC------CCeEEEEECCCCCCCceeeeeechhhcccccCCCc-ccceeECCCe-EEEEcCCCc-CCCCCCeEEEE
Confidence 776653 357999998877 2222110 1 1111 222233 355 777432221 13345789999
Q ss_pred eCCCCc
Q 014222 239 DPNKNR 244 (428)
Q Consensus 239 d~~t~~ 244 (428)
|..|.+
T Consensus 170 D~~T~~ 175 (462)
T 2ece_A 170 DHYSFE 175 (462)
T ss_dssp CTTTCC
T ss_pred ECCCCe
Confidence 999764
No 224
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=93.41 E-value=2.8 Score=41.40 Aligned_cols=138 Identities=10% Similarity=-0.038 Sum_probs=73.3
Q ss_pred CceEEEEEC--CCCceeeCCCCCcCCcceeeEEECC-EEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceE
Q 014222 183 MRRVIFYSA--RTNKWHRAPDMLRRRHFFGSCVINN-CLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFI 259 (428)
Q Consensus 183 ~~~v~~yd~--~t~~W~~~~~~~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~ 259 (428)
...++..+. .... ..+......+ ......++ .++++.+.. ..+.+||..+.+-..+...+. ...
T Consensus 89 ~~~l~~~~~~~~g~~-~~l~~~~~~~--~~~~s~dg~~~~~~s~~~-------~~~~l~d~~~g~~~~l~~~~~---~~~ 155 (582)
T 3o4h_A 89 QHALFKVNTSRPGEE-QRLEAVKPMR--ILSGVDTGEAVVFTGATE-------DRVALYALDGGGLRELARLPG---FGF 155 (582)
T ss_dssp CEEEEEEETTSTTCC-EECTTSCSBE--EEEEEECSSCEEEEEECS-------SCEEEEEEETTEEEEEEEESS---CEE
T ss_pred ceEEEEEeccCCCcc-ccccCCCCce--eeeeCCCCCeEEEEecCC-------CCceEEEccCCcEEEeecCCC---ceE
Confidence 446778887 4333 2343332222 22333343 455554432 234488988887666653332 223
Q ss_pred EEEECCEEEEEecC-CCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCC-cEEEEEeCCCCcee
Q 014222 260 GVVYEGKWFLKGLG-SHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDG-CKIRVYDEVTDSWS 334 (428)
Q Consensus 260 ~~~~~g~lyv~Gg~-~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~-~~i~~yd~~~~~W~ 334 (428)
+..-+|+..+++.. ......++.+|+.+++++.+..... .....+..-+|+.++.+..++ ..|+++|.++++..
T Consensus 156 ~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~-~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 156 VSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG-SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC-EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred EECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC-ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 33456765554432 2222458999999998887754221 111111223566444443333 47999999988877
No 225
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=93.40 E-value=1.4 Score=39.58 Aligned_cols=176 Identities=12% Similarity=0.160 Sum_probs=86.1
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCC-ce
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTN-KW 196 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~-~W 196 (428)
++.||+...+ ..+++|| .+++-.-....+. ....+.+...++.||+. ... ++.||+..+ .|
T Consensus 30 ~g~l~v~t~~----~~l~~~d-~~g~~~~~~~~~~----~~~~~~~~~~~g~l~v~--------t~~-l~~~d~~g~~~~ 91 (330)
T 3hxj_A 30 NGTIYLGSSN----KNLYAIN-TDGSVKWFFKSGE----IIECRPSIGKDGTIYFG--------SDK-VYAINPDGTEKW 91 (330)
T ss_dssp TSCEECSSTT----TTTEEEC-TTSCEEESSCGGG----EEEECCEETTTTEECCS--------SCE-EEEECCCGGGGG
T ss_pred CCeEEEEcCC----CEEEEEC-CCCcEEEEEecCC----CcccceEEecCCcEEEe--------cCc-EEEECCCCcEEE
Confidence 4555554311 2467888 5555222112211 11223334333367663 122 889997433 25
Q ss_pred eeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCC-CCceEEcCCCCCCccceEEEEE-CCEEEEEecCC
Q 014222 197 HRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPN-KNRWSFISDMSTAMVPFIGVVY-EGKWFLKGLGS 274 (428)
Q Consensus 197 ~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~-t~~W~~~~~~p~~~~~~~~~~~-~g~lyv~Gg~~ 274 (428)
+.... .. .....++.++.||+... + ..+.+||+. ...|+...+.+ .. .+.+.. ++.||+...
T Consensus 92 ~~~~~--~~-~~~~~~~~~~~l~v~t~-~-------~~l~~~d~~g~~~~~~~~~~~--~~-~~~~~~~~g~l~vgt~-- 155 (330)
T 3hxj_A 92 RFDTK--KA-IVSDFTIFEDILYVTSM-D-------GHLYAINTDGTEKWRFKTKKA--IY-ATPIVSEDGTIYVGSN-- 155 (330)
T ss_dssp GSCC--------CCEEEETTEEEEECT-T-------SEEEEECTTSCEEEEEECSSC--CC-SCCEECTTSCEEEECT--
T ss_pred EEECC--CC-cccCceEECCEEEEEec-C-------CEEEEEcCCCCEEEEEcCCCc--ee-eeeEEcCCCEEEEEcC--
Confidence 43211 11 11223344888887432 1 478899987 44676543221 11 122333 778887532
Q ss_pred CCceeEEEEeCCCC-CeEecCCCCcCCCCCceEE-ECCeEEEEEccCCcEEEEEeCCC-CceeeC
Q 014222 275 HRQVLSEAYQPETD-SWFPVYDGMVAGWRNPSAS-LNRHLYALDCKDGCKIRVYDEVT-DSWSKH 336 (428)
Q Consensus 275 ~~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~i~~yd~~~-~~W~~v 336 (428)
...+++||+... .|..-.. . ......+. -++.||+.. ..++.||... ..|+.-
T Consensus 156 --~~~l~~~d~~g~~~~~~~~~--~-~~~~~~~~d~~g~l~v~t----~~l~~~d~~g~~~~~~~ 211 (330)
T 3hxj_A 156 --DNYLYAINPDGTEKWRFKTN--D-AITSAASIGKDGTIYFGS----DKVYAINPDGTEKWNFY 211 (330)
T ss_dssp --TSEEEEECTTSCEEEEEECS--S-CCCSCCEECTTCCEEEES----SSEEEECTTSCEEEEEC
T ss_pred --CCEEEEECCCCCEeEEEecC--C-CceeeeEEcCCCEEEEEe----CEEEEECCCCcEEEEEc
Confidence 124789998822 3654321 1 11122333 477787765 4699999543 246654
No 226
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=93.40 E-value=3.3 Score=38.25 Aligned_cols=116 Identities=14% Similarity=0.064 Sum_probs=59.0
Q ss_pred cceEEEEeeCCC--CceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCC---CCCCceEEEEEC
Q 014222 118 EEWIYVIKRDRE--GKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPL---KGSMRRVIFYSA 191 (428)
Q Consensus 118 ~~~l~v~gg~~~--~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~---~~~~~~v~~yd~ 191 (428)
...+|+.-...+ ....+++||+.+++-.. .++.. ... .++.. ++..+|+..-.... ......+.+||+
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~--~i~~g---~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLG--MVPTA---FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEE--EEECC---EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEE--EecCC---CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 456787753211 23478999998876432 22222 112 33443 45578888532111 002346889999
Q ss_pred CCCcee-eCCCCCc----CCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCce
Q 014222 192 RTNKWH-RAPDMLR----RRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRW 245 (428)
Q Consensus 192 ~t~~W~-~~~~~~~----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W 245 (428)
.+.+-. .++..+. ...-..+++- +..+|+..... .+.+.+||..+.+-
T Consensus 89 ~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~------~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP------ATSIGIVDVAKGDY 143 (361)
T ss_dssp TTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS------SEEEEEEETTTTEE
T ss_pred cCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC------CCeEEEEECCCCcE
Confidence 876532 2221110 0111223332 34677764321 25788899988743
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.11 E-value=1.9 Score=38.57 Aligned_cols=184 Identities=15% Similarity=0.066 Sum_probs=92.3
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEE
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF 247 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~ 247 (428)
.||+.+-. ...+++|++ ++..+.... +... ..+.+. -+|++|+.... ...+.+||+. .+.+.
T Consensus 58 ~l~~~d~~------~~~i~~~~~-~g~~~~~~~-~~~~-~~gl~~d~dG~l~v~~~~-------~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 58 TLVWSDLV------GRRVLGWRE-DGTVDVLLD-ATAF-TNGNAVDAQQRLVHCEHG-------RRAITRSDAD-GQAHL 120 (305)
T ss_dssp EEEEEETT------TTEEEEEET-TSCEEEEEE-SCSC-EEEEEECTTSCEEEEETT-------TTEEEEECTT-SCEEE
T ss_pred EEEEEECC------CCEEEEEeC-CCCEEEEeC-CCCc-cceeeECCCCCEEEEECC-------CCEEEEECCC-CCEEE
Confidence 46666432 236788887 444332211 1111 112222 25788876322 1478889886 55555
Q ss_pred cCCCCCC----ccceEEEEECCEEEEE----ecCC----------CCceeEEEEeCCCCCeEecCCCCcCCCCCceEE-E
Q 014222 248 ISDMSTA----MVPFIGVVYEGKWFLK----GLGS----------HRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS-L 308 (428)
Q Consensus 248 ~~~~p~~----~~~~~~~~~~g~lyv~----Gg~~----------~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~-~ 308 (428)
+...... .....++.-+|+||+. |... .....+++||+.+++.+.+. .. ..-...+. -
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~--~~p~gl~~sp 197 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DL--DHPNGLAFSP 197 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EE--SSEEEEEECT
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cC--CCCcceEEcC
Confidence 4321111 1112233347889985 3210 11245899999888887664 11 11111222 2
Q ss_pred CC-eEEEEEccC----CcEEEEEeCCCCceeeCcccc-cccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 309 NR-HLYALDCKD----GCKIRVYDEVTDSWSKHIDSK-MHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 309 ~~-~lyv~gG~~----~~~i~~yd~~~~~W~~v~~~~-~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
++ .||+..... ...|++||...+......... ...+.+ ....+..+|+||+..+ . .|.+||++.
T Consensus 198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~p----dgi~~d~~G~lwv~~~-~---gv~~~~~~g 267 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLP----DGFCVDRGGWLWSSSG-T---GVCVFDSDG 267 (305)
T ss_dssp TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCC----CSEEECTTSCEEECCS-S---EEEEECTTS
T ss_pred CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCC----CeEEECCCCCEEEecC-C---cEEEECCCC
Confidence 44 488876432 258999998765422111100 001111 1223445677888653 2 388999977
No 228
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=92.97 E-value=0.032 Score=51.40 Aligned_cols=41 Identities=34% Similarity=0.449 Sum_probs=37.3
Q ss_pred CCCCCChHHHHHHhcccccCCccchhhhchHhHHhhhcCCh
Q 014222 66 PLLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNF 106 (428)
Q Consensus 66 ~~~~~lpddl~~~il~rlp~~~l~~~~~v~k~W~~l~~~~~ 106 (428)
..|..||+|++.+|+.+++..++.++..|||+|+.+..++.
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 35788999999999999999999999999999999987664
No 229
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.96 E-value=8.1 Score=38.54 Aligned_cols=118 Identities=12% Similarity=0.141 Sum_probs=68.5
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEEC-CCCc--eeeCCCCCcC--------CcceeeEE--ECCE----EEEEccc
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSA-RTNK--WHRAPDMLRR--------RHFFGSCV--INNC----LYVAGGE 224 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~-~t~~--W~~~~~~~~~--------r~~~~~~~--~~~~----iyv~GG~ 224 (428)
.++.++ .||+.+.. ...++.+|. .|.+ |+.-...... ....+.++ .+++ ||+...
T Consensus 58 P~v~~g-~vyv~~~~------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 58 PLVVDG-KMYIHTSF------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp CEEETT-EEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred cEEECC-EEEEEeCC------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 345566 89988531 236889998 7774 8875433211 11223455 6777 888533
Q ss_pred cCCCCCCCCeEEEEeCCCC--ceEEcCCCCC-C-ccceEEEEECCEEEEEecCC--CCceeEEEEeCCCCC--eEecC
Q 014222 225 NGGVHRSLRSAEVYDPNKN--RWSFISDMST-A-MVPFIGVVYEGKWFLKGLGS--HRQVLSEAYQPETDS--WFPVY 294 (428)
Q Consensus 225 ~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~-~-~~~~~~~~~~g~lyv~Gg~~--~~~~~i~~yd~~~~~--W~~~~ 294 (428)
...+.++|..|. .|+.-..-+. . ....+-++.++++|+-.+.. .....+..||.++.+ |+.-.
T Consensus 130 -------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 -------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp -------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred -------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 147899998776 5875322111 1 11223355799998753211 112358899998875 87543
No 230
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.93 E-value=3.4 Score=37.05 Aligned_cols=158 Identities=12% Similarity=0.037 Sum_probs=79.8
Q ss_pred eeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE-ECCEEEEEecCCCCceeEEEEeCC
Q 014222 209 FGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV-YEGKWFLKGLGSHRQVLSEAYQPE 286 (428)
Q Consensus 209 ~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~g~lyv~Gg~~~~~~~i~~yd~~ 286 (428)
.+.++ -++.||+.-.. ...+.+||+.... ......+ ...+.++. -+|++|+...... ...+..||+.
T Consensus 35 egia~~~~g~lyv~d~~-------~~~I~~~d~~g~~-~~~~~~~--~~p~gia~~~dG~l~vad~~~~-~~~v~~~d~~ 103 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHE-------VGEIVSITPDGNQ-QIHATVE--GKVSGLAFTSNGDLVATGWNAD-SIPVVSLVKS 103 (306)
T ss_dssp EEEEECTTSCEEEEETT-------TTEEEEECTTCCE-EEEEECS--SEEEEEEECTTSCEEEEEECTT-SCEEEEEECT
T ss_pred ceEEECCCCCEEEEeCC-------CCeEEEECCCCce-EEEEeCC--CCceeEEEcCCCcEEEEeccCC-cceEEEEcCC
Confidence 33444 25778887532 2578999988753 2221121 11222332 2678998753221 2246789988
Q ss_pred CCCeEecCCCCcCCCCCceEE-ECCeEEEEEccCCcEEEEEeCCCC---ceeeCcccccccCCcccccceEEEEeCCeEE
Q 014222 287 TDSWFPVYDGMVAGWRNPSAS-LNRHLYALDCKDGCKIRVYDEVTD---SWSKHIDSKMHLGNSRALEAAALVPLNGKLC 362 (428)
Q Consensus 287 ~~~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~i~~yd~~~~---~W~~v~~~~~~~~~~~~~~~~~~~~~~~~ly 362 (428)
+++.+.+...+........+. .++.+|+..... ..|+++|+.+. .|..-+.+..............+...++.||
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~-g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~ly 182 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYR-GAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLY 182 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTT-TEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEE
T ss_pred CCeEEEEEeCCCccccCcccccCCCcEEEEECCC-CeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEE
Confidence 888776654322111112222 356678776433 48999998764 2321111100000000001233444456899
Q ss_pred EEeCCCeEEEEEeecCCC
Q 014222 363 IIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 363 v~GG~~~~~~v~~yd~~~ 380 (428)
+.--.. ..+.+||...
T Consensus 183 v~d~~~--~~I~~~~~~~ 198 (306)
T 2p4o_A 183 VSNTEK--MLLLRIPVDS 198 (306)
T ss_dssp EEETTT--TEEEEEEBCT
T ss_pred EEeCCC--CEEEEEEeCC
Confidence 875332 3567777654
No 231
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.81 E-value=2.1 Score=42.55 Aligned_cols=116 Identities=12% Similarity=0.073 Sum_probs=71.4
Q ss_pred eeeEEECCEEEEEccccCCCCCCCCeEEEEeC-CCC--ceEEcCCCCCC--------ccceEEEEECCEEEEEecCCCCc
Q 014222 209 FGSCVINNCLYVAGGENGGVHRSLRSAEVYDP-NKN--RWSFISDMSTA--------MVPFIGVVYEGKWFLKGLGSHRQ 277 (428)
Q Consensus 209 ~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~-~t~--~W~~~~~~p~~--------~~~~~~~~~~g~lyv~Gg~~~~~ 277 (428)
.+.++.++.||+....+ ..+.++|. .+. .|+.-...... ......++.+++||+....
T Consensus 56 ~~P~v~~g~vyv~~~~~-------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---- 124 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFP-------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN---- 124 (571)
T ss_dssp SCCEEETTEEEEECSTT-------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT----
T ss_pred cccEEECCEEEEEeCCC-------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC----
Confidence 34567899999976521 47899998 665 68865433211 1112345679999987532
Q ss_pred eeEEEEeCCCC--CeEecCCCCcC--CCCCceEEECCeEEEEEccC----CcEEEEEeCCCC--ceee
Q 014222 278 VLSEAYQPETD--SWFPVYDGMVA--GWRNPSASLNRHLYALDCKD----GCKIRVYDEVTD--SWSK 335 (428)
Q Consensus 278 ~~i~~yd~~~~--~W~~~~~~~~~--~~~~~~~~~~~~lyv~gG~~----~~~i~~yd~~~~--~W~~ 335 (428)
..++++|.+++ .|+.-...... ....+.++.++++|+..... ...++.||.++. .|+.
T Consensus 125 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 24789999877 48754321111 12223456788888764321 247999999876 4764
No 232
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.65 E-value=0.46 Score=48.67 Aligned_cols=175 Identities=11% Similarity=0.058 Sum_probs=89.3
Q ss_pred ceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCC----ceEEcCCCCCCcc-
Q 014222 184 RRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKN----RWSFISDMSTAMV- 256 (428)
Q Consensus 184 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~----~W~~~~~~p~~~~- 256 (428)
..+.+++..+.....+.... ...+++++. ++.||+.-.. ...+.++++.+. .-..+ ......
T Consensus 386 ~~I~~id~~~~~~~~~~~~~--~~p~gla~d~~~~~Ly~sD~~-------~~~I~~~~~~g~~~~~~~~~~--i~~~~~~ 454 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNL--RNVVALDTEVASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTV--ISRDIQA 454 (699)
T ss_dssp TC-CEECTTSCCEECCSCCC--TTCCCCEEETTTTEEEECCTT-------TTSBEEEESCCCCC-CCCCCB--CCSCC--
T ss_pred cceEEEeCCCCcceeeeccC--cceEEEccccccCeEEEEecC-------CCeEEEEecCCCCCCcceEEE--EeCCCCC
Confidence 35677777777665543221 222344443 6789986332 357888988751 11111 111111
Q ss_pred ceEEEE--ECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCCcEEEEEeCCCCc
Q 014222 257 PFIGVV--YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 257 ~~~~~~--~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
...+++ .++.||+.-.. ...|.++|+....-+.+.... ...-...++ .++.||+........|+++++....
T Consensus 455 P~glavD~~~g~LY~tD~~---~~~I~v~d~dg~~~~~l~~~~-~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSV---LGTVSVADTKGVKRKTLFREQ-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 530 (699)
T ss_dssp CCCEECCCSSSBCEECCTT---TSCEEEEBSSSCCEEEECCCS-SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC
T ss_pred cceEEEEeeCCcEEEEecc---CCeEEEEecCCCceEEEEeCC-CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC
Confidence 112222 46889987422 234788888766544442211 011112232 3688998864333579999887654
Q ss_pred eeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 333 WSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 333 W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
-+.+.... ...+ .+.++-..+++||+.-.. ...|+++|+..
T Consensus 531 ~~~l~~~~--l~~P---nGlavd~~~~~LY~aD~~--~~~I~~~d~dG 571 (699)
T 1n7d_A 531 IYSLVTEN--IQWP---NGITLDLLSGRLYWVDSK--LHSISSIDVNG 571 (699)
T ss_dssp CCEESCSS--CSSC---CCEEECTTTCCEEEEETT--TTEEEEECSSS
T ss_pred eeEEEeCC--CCCc---cEEEEeccCCEEEEEecC--CCeEEEEccCC
Confidence 43332211 1112 122222346899998643 23577788765
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.38 E-value=10 Score=38.35 Aligned_cols=115 Identities=20% Similarity=0.253 Sum_probs=70.6
Q ss_pred EEEeCCEEEEEeeeCCCCCCCceEEEEECCCCc--eeeCCCCCcC--------CcceeeEEECCEEEEEccccCCCCCCC
Q 014222 163 AVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNK--WHRAPDMLRR--------RHFFGSCVINNCLYVAGGENGGVHRSL 232 (428)
Q Consensus 163 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 232 (428)
++.++ .||+... ...++.+|..|.+ |+.-...+.. ....+.++.+++||+....
T Consensus 74 ~v~~g-~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d-------- 137 (677)
T 1kb0_A 74 VVVDG-IMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD-------- 137 (677)
T ss_dssp EEETT-EEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT--------
T ss_pred EEECC-EEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC--------
Confidence 45566 8998753 2368899988875 8765433211 1223466788999986431
Q ss_pred CeEEEEeCCCC--ceEEcCC-C-CC-CccceEEEEECCEEEEEecCC--CCceeEEEEeCCCCC--eEec
Q 014222 233 RSAEVYDPNKN--RWSFISD-M-ST-AMVPFIGVVYEGKWFLKGLGS--HRQVLSEAYQPETDS--WFPV 293 (428)
Q Consensus 233 ~~v~~yd~~t~--~W~~~~~-~-p~-~~~~~~~~~~~g~lyv~Gg~~--~~~~~i~~yd~~~~~--W~~~ 293 (428)
..+.++|..|. .|+.-.. - +. .....+.++.++++|+..+.. .....+.+||.++++ |+.-
T Consensus 138 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 138 GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 47899999876 5876432 1 11 112233456799999864321 123358999998875 8764
No 234
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=92.34 E-value=4.6 Score=36.45 Aligned_cols=213 Identities=5% Similarity=-0.096 Sum_probs=104.0
Q ss_pred ceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcce
Q 014222 131 KISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFF 209 (428)
Q Consensus 131 ~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~ 209 (428)
...++++|..+++-..+ . . ....+.. +|..|+......+ .....++++|..+++.+.+...+. ..
T Consensus 42 ~~~l~~~d~~~~~~~~l---~-----~-~~~~~~SpDg~~la~~~~~~~--~~~~~l~~~~~~~g~~~~l~~~~~---~~ 107 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI---E-----N-ATMPRISPDGKKIAFMRANEE--KKVSEIWVADLETLSSKKILEAKN---IR 107 (347)
T ss_dssp EEEEEEEETTTCCEEEE---E-----S-CEEEEECTTSSEEEEEEEETT--TTEEEEEEEETTTTEEEEEEEESE---EE
T ss_pred cceEEEEeCCCCceEEc---c-----c-CCCeEECCCCCEEEEEEeccC--CCcceEEEEECCCCceEEEEcCCC---cc
Confidence 35788899988776555 1 1 1222232 3434444432221 124579999998887766644332 11
Q ss_pred eeEE-ECCE-EEEEccccC----------------CC---CCCCCeEEEEeCCCCce-EEcCCCCCCccceEEEEECCEE
Q 014222 210 GSCV-INNC-LYVAGGENG----------------GV---HRSLRSAEVYDPNKNRW-SFISDMSTAMVPFIGVVYEGKW 267 (428)
Q Consensus 210 ~~~~-~~~~-iyv~GG~~~----------------~~---~~~~~~v~~yd~~t~~W-~~~~~~p~~~~~~~~~~~~g~l 267 (428)
.... -+++ |++...... +. ......++++|..+.+. ..+.. + ........-+| +
T Consensus 108 ~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~ 183 (347)
T 2gop_A 108 SLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-I 183 (347)
T ss_dssp EEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-E
T ss_pred ceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-E
Confidence 2222 1444 444432100 00 01124688999998877 55544 2 12222222355 5
Q ss_pred EEEecCCC-----C-ceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCe-EEEEEccC------CcEEEEEeCCCCcee
Q 014222 268 FLKGLGSH-----R-QVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRH-LYALDCKD------GCKIRVYDEVTDSWS 334 (428)
Q Consensus 268 yv~Gg~~~-----~-~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-lyv~gG~~------~~~i~~yd~~~~~W~ 334 (428)
++.+.... . ...++.+| ++++..+... . ......-+|+ |++.+... ...|+.+| +.++.
T Consensus 184 ~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~---~-~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~ 255 (347)
T 2gop_A 184 VVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK---V-SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVM 255 (347)
T ss_dssp EEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE---E-SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE
T ss_pred EEEEecccccccccccccEEEeC--CCceEEeccC---c-ceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceE
Confidence 55443221 1 34578888 6677666432 1 1112244555 54444221 24799999 56666
Q ss_pred eCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeec
Q 014222 335 KHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSK 377 (428)
Q Consensus 335 ~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd 377 (428)
.+.... . .. ....+...++ +|+.+.......++ ++
T Consensus 256 ~l~~~~--~-~~---~~~~~~~sdg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 256 GILDEV--D-RG---VGQAKIKDGK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp ESSTTC--C-SE---EEEEEEETTE-EEEEEEETTEEEEE-EE
T ss_pred eccccC--C-cc---cCCccEEcCc-EEEEEecCCcEEEE-Ec
Confidence 553211 0 01 0111222244 77777665556666 66
No 235
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=92.22 E-value=4.4 Score=33.85 Aligned_cols=143 Identities=8% Similarity=-0.077 Sum_probs=74.5
Q ss_pred eEEECCEEEEEccccCCCCCCCCeEEEEeCCCC--ceE--Ec----CCCCCCccceEEEEE--CCEEEEEecCCCCceeE
Q 014222 211 SCVINNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWS--FI----SDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLS 280 (428)
Q Consensus 211 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~--~~----~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i 280 (428)
++..+|++|++-| ..+++++.... ... .+ +.+|.. --++... ++++|++-|. ..
T Consensus 12 i~~~~g~~yfFkg---------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~--IDAa~~~~~~~~~yfFkG~-----~y 75 (195)
T 1itv_A 12 IAEIGNQLYLFKD---------GKYWRFSEGRGSRPQGPFLIADKWPALPRK--LDSVFEEPLSKKLFFFSGR-----QV 75 (195)
T ss_dssp EEEETTEEEEEET---------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS--CSEEEECTTTCCEEEEETT-----EE
T ss_pred EEEeCCEEEEEEC---------CEEEEEECCccccCCCcEEhhhccCCCCCC--ccEEEEECCCCeEEEEeCC-----EE
Confidence 4557999999976 35677766542 221 11 234432 1122222 6889999663 24
Q ss_pred EEEeCCCCCe-EecCC--CCcCCCCCceEE--ECCeEEEEEccCCcEEEEEeCCCCceee-----CcccccccCCccccc
Q 014222 281 EAYQPETDSW-FPVYD--GMVAGWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSK-----HIDSKMHLGNSRALE 350 (428)
Q Consensus 281 ~~yd~~~~~W-~~~~~--~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~-----v~~~~~~~~~~~~~~ 350 (428)
+.|+..+-.- ..+.. .+......-+|. .++++|++-| +..|.||..+++=.. +...-...+. .
T Consensus 76 w~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg---~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~----~ 148 (195)
T 1itv_A 76 WVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG---RRLWRFDVKAQMVDPRSASEVDRMFPGVPL----D 148 (195)
T ss_dssp EEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET---TEEEEEETTTTEECGGGCEEHHHHSTTSCS----S
T ss_pred EEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC---CEEEEEeCCcccccCCCccChhhcCCCCCC----C
Confidence 6666432110 01111 111101112333 3689999976 579999987753211 0000000011 1
Q ss_pred ceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 351 AAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 351 ~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
-.++...++++|++-|. ..+.||..+
T Consensus 149 idaa~~~~g~~Yffkg~----~y~~~~~~~ 174 (195)
T 1itv_A 149 THDVFQFREKAYFCQDR----FYWRVSSRS 174 (195)
T ss_dssp CSEEEEETTEEEEEETT----EEEEEECCT
T ss_pred CCEEEEeCCeEEEEeCC----EEEEEECCc
Confidence 14555567999999886 356788777
No 236
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=91.98 E-value=8.5 Score=36.53 Aligned_cols=193 Identities=10% Similarity=0.005 Sum_probs=97.5
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCce
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKW 196 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 196 (428)
++.||+.-.. ..+..+|+.+++...+.... ..-.++++. .+..||+....++. ....+..++... .+
T Consensus 149 ~g~Lyv~d~~----~~I~~id~~~~~v~~~~~~~-----~~P~~ia~d~~G~~lyvad~~~~~--~~~~v~~~~~~g-~~ 216 (430)
T 3tc9_A 149 HNHLYLVGEQ----HPTRLIDFEKEYVSTVYSGL-----SKVRTICWTHEADSMIITNDQNNN--DRPNNYILTRES-GF 216 (430)
T ss_dssp EEEEEEEEBT----EEEEEEETTTTEEEEEECCC-----SCEEEEEECTTSSEEEEEECCSCT--TSEEEEEEEGGG-TS
T ss_pred CCeEEEEeCC----CcEEEEECCCCEEEEEecCC-----CCcceEEEeCCCCEEEEEeCCCCc--ccceEEEEeCCC-ce
Confidence 3667777532 68999999998877664411 112344444 34359988643221 233566677543 33
Q ss_pred e---eCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE-ECCE-EEE
Q 014222 197 H---RAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV-YEGK-WFL 269 (428)
Q Consensus 197 ~---~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~g~-lyv 269 (428)
. .++.+. .-+++++. ++.||+.--. ...+.+||+.+..-..+...+.......++. -+|+ ||+
T Consensus 217 ~~~~~l~~~~---~p~giavdp~~g~lyv~d~~-------~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv 286 (430)
T 3tc9_A 217 KVITELTKGQ---NCNGAETHPINGELYFNSWN-------AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYI 286 (430)
T ss_dssp CSEEEEEECS---SCCCEEECTTTCCEEEEETT-------TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred eeeeeeccCC---CceEEEEeCCCCEEEEEECC-------CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEE
Confidence 3 222222 22334443 5789987432 2589999998776533322222111112222 2454 898
Q ss_pred EecCCCCceeEEEEe--CCCCCeE---ecCCCC-----------cCCCCCc--eEEE----------CCeEEEEEccCCc
Q 014222 270 KGLGSHRQVLSEAYQ--PETDSWF---PVYDGM-----------VAGWRNP--SASL----------NRHLYALDCKDGC 321 (428)
Q Consensus 270 ~Gg~~~~~~~i~~yd--~~~~~W~---~~~~~~-----------~~~~~~~--~~~~----------~~~lyv~gG~~~~ 321 (428)
.-.. ...+++|| ..+.+.. .+...+ ......+ .+.+ ++.||+....+ .
T Consensus 287 ~d~~---~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n-~ 362 (430)
T 3tc9_A 287 VVVN---QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDREN-H 362 (430)
T ss_dssp EETT---TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGG-T
T ss_pred EECC---CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCC-c
Confidence 7532 22355544 3333221 111100 0111222 2333 36899997543 4
Q ss_pred EEEEEeCCCCceeeCc
Q 014222 322 KIRVYDEVTDSWSKHI 337 (428)
Q Consensus 322 ~i~~yd~~~~~W~~v~ 337 (428)
.|.++|++. ....+.
T Consensus 363 ~I~~i~~~G-~v~~~~ 377 (430)
T 3tc9_A 363 CIRILTPQG-RVTTFA 377 (430)
T ss_dssp EEEEECTTS-EEEEEE
T ss_pred EEEEECCCC-cEEEEE
Confidence 899999654 444443
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.95 E-value=12 Score=38.04 Aligned_cols=115 Identities=23% Similarity=0.281 Sum_probs=70.1
Q ss_pred EEEeCCEEEEEeeeCCCCCCCceEEEEECCCCc--eeeCCCCCcC--------CcceeeEEECCEEEEEccccCCCCCCC
Q 014222 163 AVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNK--WHRAPDMLRR--------RHFFGSCVINNCLYVAGGENGGVHRSL 232 (428)
Q Consensus 163 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 232 (428)
++.++ .||+... ...++.+|..|.+ |+.-...+.. ....+.++.+++||+....
T Consensus 67 ~v~~g-~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d-------- 130 (689)
T 1yiq_A 67 IVVDG-VMYTTGP-------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD-------- 130 (689)
T ss_dssp EEETT-EEEEECG-------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT--------
T ss_pred EEECC-EEEEEcC-------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC--------
Confidence 45566 8998753 2368889988775 8764432211 1122456788999886421
Q ss_pred CeEEEEeCCCC--ceEEcCC-CCC--CccceEEEEECCEEEEEecC--CCCceeEEEEeCCCCC--eEec
Q 014222 233 RSAEVYDPNKN--RWSFISD-MST--AMVPFIGVVYEGKWFLKGLG--SHRQVLSEAYQPETDS--WFPV 293 (428)
Q Consensus 233 ~~v~~yd~~t~--~W~~~~~-~p~--~~~~~~~~~~~g~lyv~Gg~--~~~~~~i~~yd~~~~~--W~~~ 293 (428)
..+.++|..|. .|+.-.. -+. .....+.++.++++|+..+. ......+.+||.++++ |+.-
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 47899999876 5876543 111 11122345679999885322 1123358999998875 8754
No 238
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.92 E-value=8.3 Score=36.24 Aligned_cols=195 Identities=12% Similarity=0.082 Sum_probs=103.0
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCc-
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNK- 195 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~- 195 (428)
++.||+... ....+.++|+.++.-..+..... ..+ ++.. .+..||+..... ...++++++.++.
T Consensus 141 ~g~lyv~d~---~~~~I~~id~~~g~~~~~~~~~~-----~~~-ia~~~~g~~l~~~d~~~-----~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 141 NNTVLAYQR---DDPRVRLISVDDNKVTTVHPGFK-----GGK-PAVTKDKQRVYSIGWEG-----THTVYVYMKASGWA 206 (409)
T ss_dssp TTEEEEEET---TTTEEEEEETTTTEEEEEEETCC-----BCB-CEECTTSSEEEEEBSST-----TCEEEEEEGGGTTC
T ss_pred CCCEEEEec---CCCcEEEEECCCCEEEEeeccCC-----CCc-eeEecCCCcEEEEecCC-----CceEEEEEcCCCce
Confidence 456777753 23478999999877665533221 122 3333 333567663211 1279999987653
Q ss_pred eeeCCCCC--cCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcC---CCCCCccc-e-EEEEE--C
Q 014222 196 WHRAPDML--RRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFIS---DMSTAMVP-F-IGVVY--E 264 (428)
Q Consensus 196 W~~~~~~~--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~---~~p~~~~~-~-~~~~~--~ 264 (428)
...+.... ....-+++++. ++.||+... ...+.+||+.+.....+. ........ . ..+.. +
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~--------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~ 278 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDS--------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVD 278 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECT--------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTT
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEEC--------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCC
Confidence 22331111 11222234443 689999422 247999999888755541 11111112 1 34443 5
Q ss_pred CEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcC----------CCCCc-eEEE--CCeEEEEEccCCcEEEEEeCCCC
Q 014222 265 GKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVA----------GWRNP-SASL--NRHLYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 265 g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~----------~~~~~-~~~~--~~~lyv~gG~~~~~i~~yd~~~~ 331 (428)
+.||+.... ...+.+||+....-......... ....+ ...+ +|.||+.....+..|.++|+.+.
T Consensus 279 g~lyv~d~~---~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 279 SNFYMSDQN---LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp TEEEEEETT---TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred CEEEEEeCC---CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 899998532 23578888765422221111000 01122 2233 57899998623458999997666
Q ss_pred ceeeCc
Q 014222 332 SWSKHI 337 (428)
Q Consensus 332 ~W~~v~ 337 (428)
.-..+.
T Consensus 356 ~v~~~~ 361 (409)
T 3hrp_A 356 YVSTVA 361 (409)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 655443
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=91.85 E-value=0.16 Score=47.61 Aligned_cols=140 Identities=15% Similarity=0.115 Sum_probs=57.3
Q ss_pred ccceEEEEeeCCCCceeEEEEeCCCCc--eEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCC
Q 014222 117 AEEWIYVIKRDREGKISWHAFDPIYQL--WQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTN 194 (428)
Q Consensus 117 ~~~~l~v~gg~~~~~~~~~~yd~~~~~--W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 194 (428)
.++.||+.+.+ ..+.++|..+++ |+.-. .+ .....++.++ .+|+.++.+ ..++.+|..++
T Consensus 8 ~~~~v~~gs~d----g~v~a~d~~tG~~~W~~~~---~~----~~s~p~~~~g-~~~v~~s~d------g~l~a~d~~tG 69 (369)
T 2hz6_A 8 PETLLFVSTLD----GSLHAVSKRTGSIKWTLKE---DP----VLQVPTHVEE-PAFLPDPND------GSLYTLGSKNN 69 (369)
T ss_dssp CTTEEEEEETT----SEEEEEETTTCCEEEEEEC---CC----SCCCC------CCEEECTTT------CCEEEC-----
T ss_pred eCCEEEEEcCC----CEEEEEECCCCCEEEEecC---CC----ceecceEcCC-CEEEEeCCC------CEEEEEECCCC
Confidence 36677776532 268899988875 65432 11 0112233445 577775432 35889998765
Q ss_pred --ceeeCCCCCcCCcceeeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCC--ceEEcCCCCCCccceEEEEECCEEEE
Q 014222 195 --KWHRAPDMLRRRHFFGSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWSFISDMSTAMVPFIGVVYEGKWFL 269 (428)
Q Consensus 195 --~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~~~~~~~~~~~g~lyv 269 (428)
.|+.-...+... ..+.++ .++.||+ |+.+ ..+.++|+.+. .|+.-.... . ..+..++.+|+
T Consensus 70 ~~~w~~~~~~~~~~-~~sp~~~~~~~v~~-g~~d-------g~v~a~D~~tG~~~w~~~~~~~-~----~~~p~~~~v~~ 135 (369)
T 2hz6_A 70 EGLTKLPFTIPELV-QASPCRSSDGILYM-GKKQ-------DIWYVIDLLTGEKQQTLSSAFA-D----SLSPSTSLLYL 135 (369)
T ss_dssp CCSEECSCCHHHHH-TTCSCC-----CCC-CEEE-------EEEEEECCC---------------------------EEE
T ss_pred ceeeeeeccCcccc-ccCceEecCCEEEE-EeCC-------CEEEEEECCCCcEEEEecCCCc-c----cccccCCEEEE
Confidence 355322211110 111122 3555554 4332 46888998865 465432111 0 11114566666
Q ss_pred EecCCCCceeEEEEeCCCCC--eEe
Q 014222 270 KGLGSHRQVLSEAYQPETDS--WFP 292 (428)
Q Consensus 270 ~Gg~~~~~~~i~~yd~~~~~--W~~ 292 (428)
.+. ...+.++|+.+++ |+.
T Consensus 136 ~~~----dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 136 GRT----EYTITMYDTKTRELRWNA 156 (369)
T ss_dssp EEE----EEEEECCCSSSSSCCCEE
T ss_pred Eec----CCEEEEEECCCCCEEEeE
Confidence 432 2247888987764 874
No 240
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=91.81 E-value=16 Score=39.12 Aligned_cols=225 Identities=12% Similarity=-0.050 Sum_probs=111.6
Q ss_pred eEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeC
Q 014222 120 WIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRA 199 (428)
Q Consensus 120 ~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 199 (428)
.+++.+ +.++...++.+|+..+.-..+..... .......-+| +.++++. ...++++|..+..-..+
T Consensus 215 ~l~~~~-~~dg~~~l~~~~~~g~~~~~l~~~~~-----~~~~~~SpDG-~~la~~~-------~~~i~~~d~~~~~l~~l 280 (1045)
T 1k32_A 215 RIYFIT-DIDGFGQIYSTDLDGKDLRKHTSFTD-----YYPRHLNTDG-RRILFSK-------GGSIYIFNPDTEKIEKI 280 (1045)
T ss_dssp EEEEEE-CTTSSCEEEEEETTSCSCEECCCCCS-----SCEEEEEESS-SCEEEEE-------TTEEEEECTTTCCEEEC
T ss_pred EEEEEE-eccCceEEEEEeCCCCcceEecCCCC-----cceeeEcCCC-CEEEEEe-------CCEEEEecCCceEeeee
Confidence 344433 33445578888877666555543221 1111222344 4444432 23688888855544433
Q ss_pred CCCCc---------CCcceeeE-E-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEE
Q 014222 200 PDMLR---------RRHFFGSC-V-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWF 268 (428)
Q Consensus 200 ~~~~~---------~r~~~~~~-~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~ly 268 (428)
..-.. ...-..++ . -+++..+++. ...+..+|..+..-..+...+.......... +|+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l 351 (1045)
T 1k32_A 281 EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--------RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAF 351 (1045)
T ss_dssp CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--------TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEE
T ss_pred ccCcccccccccccccccceeeecCCCCCEEEEEE--------cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeE
Confidence 22100 00111222 2 3454334333 1467888887776555443222122222233 66655
Q ss_pred EEecCCCCceeEE-EEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCC
Q 014222 269 LKGLGSHRQVLSE-AYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGN 345 (428)
Q Consensus 269 v~Gg~~~~~~~i~-~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~ 345 (428)
+++.. ...++ .||..+.+-..+.. . ......+. -+++..+++..+ ..+++||.++.+-..+... ....
T Consensus 352 ~~~s~---~~~l~~~~d~~~~~~~~l~~-~--~~~~~~~~~SpDG~~la~~~~~-~~v~~~d~~tg~~~~~~~~--~~~~ 422 (1045)
T 1k32_A 352 IHGTR---EGDFLGIYDYRTGKAEKFEE-N--LGNVFAMGVDRNGKFAVVANDR-FEIMTVDLETGKPTVIERS--REAM 422 (1045)
T ss_dssp EEEET---TEEEEEEEETTTCCEEECCC-C--CCSEEEEEECTTSSEEEEEETT-SEEEEEETTTCCEEEEEEC--SSSC
T ss_pred EEEEC---CCceEEEEECCCCCceEecC-C--ccceeeeEECCCCCEEEEECCC-CeEEEEECCCCceEEeccC--CCCC
Confidence 55433 34577 89998877666541 1 11112222 366666666544 4899999998876655321 1111
Q ss_pred cccccceEEEEeCCeEEEEeCC--------CeEEEEEeecCCC
Q 014222 346 SRALEAAALVPLNGKLCIIRNN--------MSISLVDVSKSNG 380 (428)
Q Consensus 346 ~~~~~~~~~~~~~~~lyv~GG~--------~~~~~v~~yd~~~ 380 (428)
. .......+++.+++++. .....+.+||..+
T Consensus 423 v----~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 423 I----TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp C----CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred c----cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 1 12334456665555432 2345788888876
No 241
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.81 E-value=11 Score=37.40 Aligned_cols=116 Identities=15% Similarity=0.204 Sum_probs=63.6
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCc--eEeCCCCCCCCcc---ccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQL--WQPLPPIPKEYSE---ALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSAR 192 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~--W~~l~~~~~~~~~---r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~ 192 (428)
++.||+..... .++++|..+++ |+.-...+..... ....+.++.++ +||+... ...++.+|..
T Consensus 68 ~g~vyv~~~~~----~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~-~v~~~t~-------dg~l~AlD~~ 135 (582)
T 1flg_A 68 DGVIYVTASYS----RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGD-KVFFGTL-------DASVVALNKN 135 (582)
T ss_dssp TTEEEEEETTT----EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETT-EEEEEET-------TTEEEEEESS
T ss_pred CCEEEEEcCCC----CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECC-EEEEEeC-------CCEEEEEECC
Confidence 77888876421 38999998876 8754332211000 01134455566 7887521 2378999998
Q ss_pred CCc--eeeCCCCCcCC--cceeeEEECC------EEEEEccccCCCCCCCCeEEEEeCCCC--ceEE
Q 014222 193 TNK--WHRAPDMLRRR--HFFGSCVINN------CLYVAGGENGGVHRSLRSAEVYDPNKN--RWSF 247 (428)
Q Consensus 193 t~~--W~~~~~~~~~r--~~~~~~~~~~------~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~ 247 (428)
|.+ |+.-..-+... ...+.++.++ .||+-....+ ......+..||+.|. .|+.
T Consensus 136 TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e--~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 136 TGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDE--FGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp SCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGG--GCCBCEEEEECTTTCCEEEEE
T ss_pred CCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccc--cCCCCEEEEEECCCCCEEeec
Confidence 885 87532211111 1123445566 6766322110 112357999999876 5864
No 242
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=91.55 E-value=8.6 Score=35.66 Aligned_cols=115 Identities=11% Similarity=-0.084 Sum_probs=57.8
Q ss_pred cceEEEEeeCCCCc-eeEEEEeCCCCceEeCCCCCCCCccccccEEEE-EeCCEEEEEeeeCCC---CCCCceEEEEECC
Q 014222 118 EEWIYVIKRDREGK-ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAV-LSGCHLYLFGGKDPL---KGSMRRVIFYSAR 192 (428)
Q Consensus 118 ~~~l~v~gg~~~~~-~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~-~~~~~lyv~GG~~~~---~~~~~~v~~yd~~ 192 (428)
..++|+.-+..... ..+.+||+.+++- +..++.. ... .++. -++..+|+..-.... ....+.+.+||+.
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~~~--~~~i~~g---~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSGSI--LGHVNGG---FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCCeE--EEEecCC---CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 46678875311111 1789999988764 3333332 112 3333 345578888522110 0124578899998
Q ss_pred CCceeeCCCCC-cCC-----cceeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCce
Q 014222 193 TNKWHRAPDML-RRR-----HFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRW 245 (428)
Q Consensus 193 t~~W~~~~~~~-~~r-----~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W 245 (428)
+.+-...-+++ .+| .-...++ -+..||+.... ..+.+.++| .+.+-
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~------~~~~v~viD-~t~~~ 159 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA------AGPAVGLVV-QGGSS 159 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC------CCCeEEEEE-CCCCE
Confidence 76532211111 111 1112222 24567776321 125788899 87754
No 243
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.46 E-value=7.3 Score=34.66 Aligned_cols=146 Identities=9% Similarity=0.018 Sum_probs=68.9
Q ss_pred EEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecC
Q 014222 217 CLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVY 294 (428)
Q Consensus 217 ~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~ 294 (428)
.+++.|+.+ ..+.+||..+.+-...-..... ....+.+ ++++++.|+.+ ..+..||..+.+-...-
T Consensus 186 ~~~~s~~~d-------~~i~i~d~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~D---g~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 186 PIIVSCGWD-------KLVKVWNLANCKLKTNHIGHTG--YLNTVTVSPDGSLCASGGKD---GQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp CEEEEEETT-------SCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEETT---CEEEEEETTTTEEEEEE
T ss_pred cEEEEEcCC-------CEEEEEECCCCceeeEecCCCC--cEEEEEECCCCCEEEEEeCC---CeEEEEEeccCceeeee
Confidence 455666643 4688899988764332211111 1122222 56666666543 24668888765422211
Q ss_pred CCCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCceeeCccccc----ccCCcccccceEEEEeCCeEEEEeCCCeE
Q 014222 295 DGMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKM----HLGNSRALEAAALVPLNGKLCIIRNNMSI 370 (428)
Q Consensus 295 ~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~----~~~~~~~~~~~~~~~~~~~lyv~GG~~~~ 370 (428)
.........+...+..++.++.+ ..|.+||.++..-........ ..... ..........+++.++.|+.++.
T Consensus 254 --~~~~~v~~~~~~~~~~~~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~s~dg~~l~sgs~Dg~ 329 (340)
T 4aow_A 254 --DGGDIINALCFSPNRYWLCAATG-PSIKIWDLEGKIIVDELKQEVISTSSKAEP-PQCTSLAWSADGQTLFAGYTDNL 329 (340)
T ss_dssp --ECSSCEEEEEECSSSSEEEEEET-TEEEEEETTTTEEEEEECCC-------CCC-CCEEEEEECTTSSEEEEEETTSC
T ss_pred --cCCceEEeeecCCCCceeeccCC-CEEEEEECCCCeEEEeccccceeeeccCCC-CCEEEEEECCCCCEEEEEeCCCE
Confidence 11111111222334445555554 479999988764322111000 00000 00112233446777788876653
Q ss_pred EEEEeecCCC
Q 014222 371 SLVDVSKSNG 380 (428)
Q Consensus 371 ~~v~~yd~~~ 380 (428)
|.+||.++
T Consensus 330 --v~iW~~~t 337 (340)
T 4aow_A 330 --VRVWQVTI 337 (340)
T ss_dssp --EEEEEEEC
T ss_pred --EEEEeCCC
Confidence 55677655
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.28 E-value=3.4 Score=42.06 Aligned_cols=114 Identities=17% Similarity=0.198 Sum_probs=70.9
Q ss_pred eeEEECCEEEEEccccCCCCCCCCeEEEEeCCCC--ceEEcCCCCCC--------ccceEEEEECCEEEEEecCCCCcee
Q 014222 210 GSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWSFISDMSTA--------MVPFIGVVYEGKWFLKGLGSHRQVL 279 (428)
Q Consensus 210 ~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~--------~~~~~~~~~~g~lyv~Gg~~~~~~~ 279 (428)
+.++.+++||+.... ..+.++|..|. .|+.-...+.. ....+.++.+++||+.... ..
T Consensus 65 ~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d----g~ 132 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF--------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD----GR 132 (689)
T ss_dssp CCEEETTEEEEECGG--------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT----SE
T ss_pred cCEEECCEEEEEcCC--------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC----CE
Confidence 456789999997653 36889998765 68865433211 1112345679999986532 24
Q ss_pred EEEEeCCCCC--eEecCC-CCcC--CCCCceEEECCeEEEEEcc----CCcEEEEEeCCCCc--eee
Q 014222 280 SEAYQPETDS--WFPVYD-GMVA--GWRNPSASLNRHLYALDCK----DGCKIRVYDEVTDS--WSK 335 (428)
Q Consensus 280 i~~yd~~~~~--W~~~~~-~~~~--~~~~~~~~~~~~lyv~gG~----~~~~i~~yd~~~~~--W~~ 335 (428)
++++|.++++ |+.-.. .... ....+.++.++.+|+..+. ....++.||.++.+ |+.
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 7899998874 886542 1111 1122345678888875322 12479999998775 875
No 245
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=91.22 E-value=14 Score=37.45 Aligned_cols=253 Identities=6% Similarity=-0.048 Sum_probs=124.2
Q ss_pred cceEEEEeeCC-CCceeEEEEeCCCCceEeCCCCCC-CCcccc-ccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCC
Q 014222 118 EEWIYVIKRDR-EGKISWHAFDPIYQLWQPLPPIPK-EYSEAL-GFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTN 194 (428)
Q Consensus 118 ~~~l~v~gg~~-~~~~~~~~yd~~~~~W~~l~~~~~-~~~~r~-~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 194 (428)
+.++|..-... .....++..+...+.|..+-.... ...... ..+.+...+++.++++...+. .....++++|..++
T Consensus 83 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G-~~~~~i~v~d~~tg 161 (710)
T 2xdw_A 83 GKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASG-SDWVTIKFMKVDGA 161 (710)
T ss_dssp TTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETT-CSCEEEEEEETTTT
T ss_pred CCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCC-CceEEEEEEECCCC
Confidence 45555554332 223467888877777765522111 000001 112233323245554433221 12348999999999
Q ss_pred ceeeCCCCCcCCcceeeEEE-CCEEEEEccccCCC---------CCCCCeEEEEeCCCCceE--EcCCCC-CCccceEE-
Q 014222 195 KWHRAPDMLRRRHFFGSCVI-NNCLYVAGGENGGV---------HRSLRSAEVYDPNKNRWS--FISDMS-TAMVPFIG- 260 (428)
Q Consensus 195 ~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~---------~~~~~~v~~yd~~t~~W~--~~~~~p-~~~~~~~~- 260 (428)
+...... .... ....+.. +++.++++...... ......++.++..+.+.. .+-..+ ........
T Consensus 162 ~~~~~~~-~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 162 KELPDVL-ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp EEEEEEE-EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCcccc-cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 8765321 1111 1122222 55433343332110 022356888999887642 221221 12211222
Q ss_pred EEECCEEEEEec-CCCC-ceeEEEEeCCC------C--CeEecCCCCcCCCCCceEEECCeEEEEEccCC--cEEEEEeC
Q 014222 261 VVYEGKWFLKGL-GSHR-QVLSEAYQPET------D--SWFPVYDGMVAGWRNPSASLNRHLYALDCKDG--CKIRVYDE 328 (428)
Q Consensus 261 ~~~~g~lyv~Gg-~~~~-~~~i~~yd~~~------~--~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~--~~i~~yd~ 328 (428)
..-+|+..++.. .... ...++.+|..+ . .+..+...... .......-++.||+.+..+. ..|+.+|.
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~ 318 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDF 318 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEET
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc-EEEEEeccCCEEEEEECCCCCCCEEEEEeC
Confidence 223665444332 2221 34578889875 4 57777542221 11111234677888875432 47999998
Q ss_pred CCC---ceeeCcccccccCCcccccceEEEEe-CCeEEEEeCCCeEEEEEeecCCC
Q 014222 329 VTD---SWSKHIDSKMHLGNSRALEAAALVPL-NGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 329 ~~~---~W~~v~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
++. .|+.+..-... .. -..+... +++|++.........++++|+.+
T Consensus 319 ~~~~~~~~~~l~~~~~~--~~----~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~ 368 (710)
T 2xdw_A 319 TDPEESKWKVLVPEHEK--DV----LEWVACVRSNFLVLCYLHDVKNTLQLHDLAT 368 (710)
T ss_dssp TSCCGGGCEEEECCCSS--CE----EEEEEEETTTEEEEEEEETTEEEEEEEETTT
T ss_pred CCCCcccceeccCCCCC--Ce----EEEEEEEcCCEEEEEEEECCEEEEEEEECCC
Confidence 875 48776431110 01 1223333 78888887766677788999844
No 246
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=91.03 E-value=11 Score=36.03 Aligned_cols=210 Identities=13% Similarity=0.102 Sum_probs=107.8
Q ss_pred ceEEEEeeCCCCceeEEEEeCCCCceEeC--CCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCc-
Q 014222 119 EWIYVIKRDREGKISWHAFDPIYQLWQPL--PPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNK- 195 (428)
Q Consensus 119 ~~l~v~gg~~~~~~~~~~yd~~~~~W~~l--~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~- 195 (428)
+.+|++.| +..+.||..+++...- +.++ . .-++....| ++|+|-|. ..++||+.+++
T Consensus 159 ~~~yfFkG-----~~yw~yd~~~~~~~~~~w~gi~-----~-iDAA~~~~g-~~YfFkG~--------~y~rfd~~~~~v 218 (460)
T 1qhu_A 159 EGILFFQG-----NRKWFWDLTTGTKKERSWPAVG-----N-CTSALRWLG-RYYCFQGN--------QFLRFNPVSGEV 218 (460)
T ss_dssp SEEEEEET-----TEEEEEETTTTEEEEECCTTSC-----C-CSEEEEETT-EEEEEETT--------EEEEECTTTCCC
T ss_pred CeEEEEec-----ccEEEEecccceeecccCCCCC-----c-cchheeeCC-ceEEEECC--------EEEEEcCccCcc
Confidence 44566654 2678999988765421 1122 1 123333345 89999653 67888886653
Q ss_pred -----------eeeCCCCC------------------cCCcceeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCc
Q 014222 196 -----------WHRAPDML------------------RRRHFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNR 244 (428)
Q Consensus 196 -----------W~~~~~~~------------------~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~ 244 (428)
|..++... .+.....++. .+|++|++-|. ..+++|...+.
T Consensus 219 ~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~---------~yWR~~~~~~~ 289 (460)
T 1qhu_A 219 PPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS---------HYWRLDTNRDG 289 (460)
T ss_dssp CTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT---------EEEECTTGGGC
T ss_pred cCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC---------EEEEEecCCCC
Confidence 22211100 0111233343 36899998763 45666654432
Q ss_pred eE--Ec----CCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCC----------CCcC--CCCCceE
Q 014222 245 WS--FI----SDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYD----------GMVA--GWRNPSA 306 (428)
Q Consensus 245 W~--~~----~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~----------~~~~--~~~~~~~ 306 (428)
+. .+ +.+|.. --++...++++|++-|. ..++|+..++ .+.+.. .+.. ....-+|
T Consensus 290 ~~p~~Is~~WpglP~~--IDAAf~~~~~~yfFkG~-----~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA 361 (460)
T 1qhu_A 290 WHSWPIAHQWPQGPST--VDAAFSWEDKLYLIQDT-----KVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAA 361 (460)
T ss_dssp CCCEEGGGTCTTSCSS--CSEEEEETTEEEEEETT-----EEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEE
T ss_pred cCccchhhhccCCCCC--CcEEEEECCeEEEEeCC-----EEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEE
Confidence 21 11 123322 23444568999999653 3567776431 122211 1111 1112233
Q ss_pred E---ECCeEEEEEccCCcEEEEEeCCCC---ceeeCcccccccCCcccccceEEEE------------eCCeEEEEeCCC
Q 014222 307 S---LNRHLYALDCKDGCKIRVYDEVTD---SWSKHIDSKMHLGNSRALEAAALVP------------LNGKLCIIRNNM 368 (428)
Q Consensus 307 ~---~~~~lyv~gG~~~~~i~~yd~~~~---~W~~v~~~~~~~~~~~~~~~~~~~~------------~~~~lyv~GG~~ 368 (428)
. -++++|++-| +..|.||.... .+...+.++.. -.+++. .++.+|++-|..
T Consensus 362 ~~~~~~~ktyfFkG---~~ywryd~~~~Pr~i~~~~~gi~~~--------vdAaf~~~~~~~~~~~~~~~~~~yfF~g~~ 430 (460)
T 1qhu_A 362 FVCPGSSRLHIMAG---RRLWWLDLKSGAQATWTELPWPHEK--------VDGALCMEKPLGPNSCSTSGPNLYLIHGPN 430 (460)
T ss_dssp ECCTTCCEEEEEET---TEEEEEEGGGGGGCCCEEECCSCSC--------CSEEEEESSCSSSCCSCSSSCEEEEEETTE
T ss_pred EEeCCCCEEEEEEC---CEEEEEECCCCccchhhhCCCCCCC--------cCEEEecccccCcccccccCCeEEEEECCE
Confidence 3 3689999976 57999998743 11111111111 133344 468899998863
Q ss_pred eEEEEEeecCCC
Q 014222 369 SISLVDVSKSNG 380 (428)
Q Consensus 369 ~~~~v~~yd~~~ 380 (428)
.+.||..+
T Consensus 431 ----y~~~~~~~ 438 (460)
T 1qhu_A 431 ----LYCYRHVD 438 (460)
T ss_dssp ----EEEESSHH
T ss_pred ----EEEEcChh
Confidence 46677655
No 247
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.03 E-value=3.1 Score=39.29 Aligned_cols=145 Identities=9% Similarity=0.003 Sum_probs=66.4
Q ss_pred EEEEccccCCCCCCCCeEEEEeCCCC---ceEEc--CCCCCCccceEEEEE---CCEEEEEecCCCCceeEEEEeCCCCC
Q 014222 218 LYVAGGENGGVHRSLRSAEVYDPNKN---RWSFI--SDMSTAMVPFIGVVY---EGKWFLKGLGSHRQVLSEAYQPETDS 289 (428)
Q Consensus 218 iyv~GG~~~~~~~~~~~v~~yd~~t~---~W~~~--~~~p~~~~~~~~~~~---~g~lyv~Gg~~~~~~~i~~yd~~~~~ 289 (428)
+++.|+.+ ..+.+||..+. .+... ..+.........+.. ++.+++.|+.. ..+..||..+..
T Consensus 196 ~l~s~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d---g~i~i~d~~~~~ 265 (430)
T 2xyi_A 196 YLLSASDD-------HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD---QKLMIWDTRNNN 265 (430)
T ss_dssp EEEEECTT-------SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCSC
T ss_pred eEEEEeCC-------CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC---CeEEEEECCCCC
Confidence 66666653 57889998873 22211 111111111122222 45666666532 247789987652
Q ss_pred -eEecCCCCcCCCCCceEEE---CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEe-CCeEEEE
Q 014222 290 -WFPVYDGMVAGWRNPSASL---NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPL-NGKLCII 364 (428)
Q Consensus 290 -W~~~~~~~~~~~~~~~~~~---~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~-~~~lyv~ 364 (428)
...+...........++.+ +..+++.|+.++ .|.+||..+.. ..+..+....... ....... +..+++.
T Consensus 266 ~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg-~v~vwd~~~~~-~~~~~~~~h~~~v----~~i~~sp~~~~~l~s 339 (430)
T 2xyi_A 266 TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK-TVALWDLRNLK-LKLHSFESHKDEI----FQVQWSPHNETILAS 339 (430)
T ss_dssp SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-EEEEEETTCTT-SCSEEEECCSSCE----EEEEECSSCTTEEEE
T ss_pred CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC-eEEEEeCCCCC-CCeEEeecCCCCE----EEEEECCCCCCEEEE
Confidence 1111110000011112233 334888887765 79999987632 1111111111111 1112222 3467887
Q ss_pred eCCCeEEEEEeecCCC
Q 014222 365 RNNMSISLVDVSKSNG 380 (428)
Q Consensus 365 GG~~~~~~v~~yd~~~ 380 (428)
|+..+ .+.+||...
T Consensus 340 ~~~d~--~i~iwd~~~ 353 (430)
T 2xyi_A 340 SGTDR--RLHVWDLSK 353 (430)
T ss_dssp EETTS--CCEEEEGGG
T ss_pred EeCCC--cEEEEeCCC
Confidence 77654 345666554
No 248
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=90.74 E-value=15 Score=36.88 Aligned_cols=211 Identities=10% Similarity=0.031 Sum_probs=116.2
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceee
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGS 211 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~ 211 (428)
.+...|..+..-..+.+++.. ....++++. .++.||+..- ....++++++.....+.+..... ..-.++
T Consensus 16 ~I~~i~l~~~~~~~~~~~~~~---~~~~~l~~d~~~~~lywtD~------~~~~I~r~~~~g~~~~~v~~~g~-~~P~Gl 85 (628)
T 4a0p_A 16 DIRRISLETNNNNVAIPLTGV---KEASALDFDVTDNRIYWTDI------SLKTISRAFMNGSALEHVVEFGL-DYPEGM 85 (628)
T ss_dssp EEEEEESSCTTCEEECCCCSC---SCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSSC-SCCCEE
T ss_pred cEEEEECCCCCcceEEEcCCC---CceEEEEEECCCCEEEEEEC------CCCeEEEEECCCCCcEEEEeCCC-CCcceE
Confidence 677788776543332222221 223445544 2348998843 23478889887655544322111 112234
Q ss_pred EE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEc--CCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeC
Q 014222 212 CV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFI--SDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQP 285 (428)
Q Consensus 212 ~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~--~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~ 285 (428)
++ .+++||+.-.. ...++++|+....=+.+ ..+..+ ...++- +|.||+.--. ....|++.++
T Consensus 86 AvD~~~~~LY~tD~~-------~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g--~~~~I~r~~~ 153 (628)
T 4a0p_A 86 AVDWLGKNLYWADTG-------TNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEWG--GKPKIDRAAM 153 (628)
T ss_dssp EEETTTTEEEEEETT-------TTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEECS--SSCEEEEEET
T ss_pred EEEeCCCEEEEEECC-------CCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCCC--CCCEEEEEeC
Confidence 54 47899997432 36899999876543332 222222 233333 6899997421 1335788888
Q ss_pred CCCCeEecCCCCcCCCCCc-eEEE---CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeE
Q 014222 286 ETDSWFPVYDGMVAGWRNP-SASL---NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKL 361 (428)
Q Consensus 286 ~~~~W~~~~~~~~~~~~~~-~~~~---~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~l 361 (428)
....-+.+.. ....+ ..++ +++||+..... +.|+++|++...=+.+.. .... ..+++..++.|
T Consensus 154 dG~~~~~l~~----~~~~P~GlalD~~~~~LY~aD~~~-~~I~~~d~dG~~~~v~~~---~l~~-----P~glav~~~~l 220 (628)
T 4a0p_A 154 DGSERTTLVP----NVGRANGLTIDYAKRRLYWTDLDT-NLIESSNMLGLNREVIAD---DLPH-----PFGLTQYQDYI 220 (628)
T ss_dssp TSCSCEEEEC----SCSSEEEEEEETTTTEEEEEETTT-TEEEEEETTSCSCEEEEE---CCSC-----EEEEEEETTEE
T ss_pred CCCceEEEEC----CCCCcceEEEccccCEEEEEECCC-CEEEEEcCCCCceEEeec---cCCC-----ceEEEEECCEE
Confidence 7665544432 11122 2333 68999998644 589999987643332221 1222 25677788999
Q ss_pred EEEeCCCeEEEEEeecCCC
Q 014222 362 CIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 362 yv~GG~~~~~~v~~yd~~~ 380 (428)
|+.--.. ..|...|..+
T Consensus 221 y~tD~~~--~~I~~~dk~t 237 (628)
T 4a0p_A 221 YWTDWSR--RSIERANKTS 237 (628)
T ss_dssp EEEETTT--TEEEEEETTT
T ss_pred EEecCCC--CEEEEEECCC
Confidence 9985322 2355666443
No 249
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=90.59 E-value=11 Score=35.12 Aligned_cols=171 Identities=12% Similarity=0.102 Sum_probs=90.0
Q ss_pred ceee--CCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeE-EEEeCC-----CC-ceEEcCC-CCCCccceEEEEEC
Q 014222 195 KWHR--APDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSA-EVYDPN-----KN-RWSFISD-MSTAMVPFIGVVYE 264 (428)
Q Consensus 195 ~W~~--~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v-~~yd~~-----t~-~W~~~~~-~p~~~~~~~~~~~~ 264 (428)
.|++ ++.++..-.-|+.+.+++.-|++|=...+ .....+ ..|-+. .. .=+.++. .....+...+-.++
T Consensus 271 pW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGD--v~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYd 348 (670)
T 3ju4_A 271 PWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGD--VAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYD 348 (670)
T ss_dssp CCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECS--SSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEET
T ss_pred CceecccccccceeeeeeeeEecCCceEEEeccCC--CCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhC
Confidence 4543 45556666778899999888888866532 222232 233221 11 1122221 11122234456689
Q ss_pred CEEEEEe-cCC--CCceeEEEEeCCCCCeEecCCCCcC-CCCCceEEECCeEEEEEccC----------C-------cEE
Q 014222 265 GKWFLKG-LGS--HRQVLSEAYQPETDSWFPVYDGMVA-GWRNPSASLNRHLYALDCKD----------G-------CKI 323 (428)
Q Consensus 265 g~lyv~G-g~~--~~~~~i~~yd~~~~~W~~~~~~~~~-~~~~~~~~~~~~lyv~gG~~----------~-------~~i 323 (428)
|+||+.. |.. ....++..-+..-..|+.+.-+-.. ....+.+..++.||++|-.. . ...
T Consensus 349 gvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~RY~a~yPRt 428 (670)
T 3ju4_A 349 GVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDRYKASYPRT 428 (670)
T ss_dssp TEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCCSSCBCCEE
T ss_pred CEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccccccccccCCCcccccccCCce
Confidence 9999984 221 2223466777778899988642111 11234678999999998321 0 112
Q ss_pred EE-------EeCCCCceeeCcccccccCCcccccc-eEEEEeCCeEE-EEeCC
Q 014222 324 RV-------YDEVTDSWSKHIDSKMHLGNSRALEA-AALVPLNGKLC-IIRNN 367 (428)
Q Consensus 324 ~~-------yd~~~~~W~~v~~~~~~~~~~~~~~~-~~~~~~~~~ly-v~GG~ 367 (428)
.. +..+.-+|..+..-.-+-.-.....+ .+++.-++-|| ||||.
T Consensus 429 F~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgE 481 (670)
T 3ju4_A 429 FYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGE 481 (670)
T ss_dssp EEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEB
T ss_pred EEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCc
Confidence 21 23445567777654322222222223 33556677776 67773
No 250
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=90.58 E-value=9.5 Score=34.44 Aligned_cols=140 Identities=11% Similarity=0.045 Sum_probs=64.7
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcce-eeEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCceE
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFF-GSCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWS 246 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~ 246 (428)
.+++.|+.+ ..+.+||..+++.... +....... +++. -+++.++.||.+ ..+.+||.....-.
T Consensus 89 ~~l~s~s~D------~~v~lwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d-------~~i~~wd~~~~~~~ 153 (343)
T 2xzm_R 89 CFAISSSWD------KTLRLWDLRTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAE-------REIKLWNILGECKF 153 (343)
T ss_dssp TEEEEEETT------SEEEEEETTSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETT-------SCEEEEESSSCEEE
T ss_pred CEEEEEcCC------CcEEEEECCCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCC-------CEEEEEeccCCcee
Confidence 466666654 3688999887754321 11111111 1222 245666667654 57888888754332
Q ss_pred EcCCCCCCccceEEEEE--CC----------EEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE--ECCeE
Q 014222 247 FISDMSTAMVPFIGVVY--EG----------KWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHL 312 (428)
Q Consensus 247 ~~~~~p~~~~~~~~~~~--~g----------~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l 312 (428)
..............+.. ++ .+++.|+.+ ..+..||.....-..+.... .....+. -+++.
T Consensus 154 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~h~---~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 154 SSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD---GRLKVWNTNFQIRYTFKAHE---SNVNHLSISPNGKY 227 (343)
T ss_dssp ECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT---SEEEEEETTTEEEEEEECCS---SCEEEEEECTTSSE
T ss_pred eeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC---CEEEEEcCCCceeEEEcCcc---ccceEEEECCCCCE
Confidence 22211111111122222 11 344445432 23567774322111111100 0011222 26777
Q ss_pred EEEEccCCcEEEEEeCCC
Q 014222 313 YALDCKDGCKIRVYDEVT 330 (428)
Q Consensus 313 yv~gG~~~~~i~~yd~~~ 330 (428)
++.|+.++ .|.+||..+
T Consensus 228 l~sgs~dg-~v~iwd~~~ 244 (343)
T 2xzm_R 228 IATGGKDK-KLLIWDILN 244 (343)
T ss_dssp EEEEETTC-EEEEEESSC
T ss_pred EEEEcCCC-eEEEEECCC
Confidence 77787664 899999843
No 251
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=90.56 E-value=9.1 Score=35.78 Aligned_cols=106 Identities=9% Similarity=0.007 Sum_probs=54.6
Q ss_pred CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEe
Q 014222 215 NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFP 292 (428)
Q Consensus 215 ~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~ 292 (428)
++.+++.|+.+ ..+.+||..+.+-...-..+........+.+ ++.+.+.|+.+. .+..||..+.+-..
T Consensus 181 ~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG---IIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS---CEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC---eEEEEEcCCccEEE
Confidence 46777777764 5899999987653221111101112222223 666666665432 46789998765432
Q ss_pred cCCCCcCCCCCceEE------ECCeEEEEEccCCcEEEEEeCCCCc
Q 014222 293 VYDGMVAGWRNPSAS------LNRHLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 293 ~~~~~~~~~~~~~~~------~~~~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
.-.. ........+. -++.+++.|+.+ ..|.+||..+.+
T Consensus 251 ~~~~-~~~~~v~~~~~~~~~s~~~~~l~s~~~d-g~i~iwd~~~~~ 294 (437)
T 3gre_A 251 SWSF-GDHAPITHVEVCQFYGKNSVIVVGGSSK-TFLTIWNFVKGH 294 (437)
T ss_dssp EEBC-TTCEEEEEEEECTTTCTTEEEEEEESTT-EEEEEEETTTTE
T ss_pred EEec-CCCCceEEEEeccccCCCccEEEEEcCC-CcEEEEEcCCCc
Confidence 2110 0000001111 134455555544 489999988665
No 252
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=90.41 E-value=7 Score=32.62 Aligned_cols=140 Identities=16% Similarity=0.111 Sum_probs=75.2
Q ss_pred EEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCC-----------ceeeCCCCCcCCcceeeEEE---CCEEEEEccccC
Q 014222 161 GCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTN-----------KWHRAPDMLRRRHFFGSCVI---NNCLYVAGGENG 226 (428)
Q Consensus 161 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~-----------~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~ 226 (428)
+++...| ++|+|-|. .+|+++.... .|.. +|. ...++.. ++++|++-|
T Consensus 11 Ai~~~~g-~~yfFkg~--------~~Wr~~~~~~~~~~~p~~Is~~w~g---lP~---~IDAa~~~~~~~~~yfFkG--- 72 (195)
T 1itv_A 11 AIAEIGN-QLYLFKDG--------KYWRFSEGRGSRPQGPFLIADKWPA---LPR---KLDSVFEEPLSKKLFFFSG--- 72 (195)
T ss_dssp EEEEETT-EEEEEETT--------EEEEECCSSSCCCEEEEEHHHHCTT---SCS---SCSEEEECTTTCCEEEEET---
T ss_pred EEEEeCC-EEEEEECC--------EEEEEECCccccCCCcEEhhhccCC---CCC---CccEEEEECCCCeEEEEeC---
Confidence 3445566 89999542 5777776542 1333 332 2223332 578999977
Q ss_pred CCCCCCCeEEEEeCCCCce-EEcC--CCCCCccceEEEE--ECCEEEEEecCCCCceeEEEEeCCCCCeEe-----cCC-
Q 014222 227 GVHRSLRSAEVYDPNKNRW-SFIS--DMSTAMVPFIGVV--YEGKWFLKGLGSHRQVLSEAYQPETDSWFP-----VYD- 295 (428)
Q Consensus 227 ~~~~~~~~v~~yd~~t~~W-~~~~--~~p~~~~~~~~~~--~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~-----~~~- 295 (428)
+..++|+..+-.- ..+. .+|......-++. .++++|++-|. ..+.||..+++=.. +..
T Consensus 73 ------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~-----~ywr~d~~~~~~~~gyPr~i~~~ 141 (195)
T 1itv_A 73 ------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR-----RLWRFDVKAQMVDPRSASEVDRM 141 (195)
T ss_dssp ------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT-----EEEEEETTTTEECGGGCEEHHHH
T ss_pred ------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC-----EEEEEeCCcccccCCCccChhhc
Confidence 3567777542111 1111 2232111222333 37899999653 35889987653111 110
Q ss_pred CCcC-CCCCceEEECCeEEEEEccCCcEEEEEeCCCCc
Q 014222 296 GMVA-GWRNPSASLNRHLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 296 ~~~~-~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
.+.. ..-.++...++.+|++-| +..+.||..+..
T Consensus 142 w~Gvp~~idaa~~~~g~~Yffkg---~~y~~~~~~~~~ 176 (195)
T 1itv_A 142 FPGVPLDTHDVFQFREKAYFCQD---RFYWRVSSRSEL 176 (195)
T ss_dssp STTSCSSCSEEEEETTEEEEEET---TEEEEEECCTTC
T ss_pred CCCCCCCCCEEEEeCCeEEEEeC---CEEEEEECCccE
Confidence 0110 111234456899999986 578999988764
No 253
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=90.39 E-value=16 Score=36.77 Aligned_cols=175 Identities=9% Similarity=0.021 Sum_probs=79.9
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCC-CcCCcceee
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDM-LRRRHFFGS 211 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~-~~~r~~~~~ 211 (428)
.+.++|..+++-... +... ...-.+++...++..++.|+.++ .+.++|.....-..+... ...+.....
T Consensus 453 ~v~vwd~~~~~~~~~--~~~h--~~~v~~~~~s~~~~~l~s~s~D~------~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 522 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRR--FVGH--TKDVLSVAFSLDNRQIVSASRDR------TIKLWNTLGECKYTISEGGEGHRDWVSC 522 (694)
T ss_dssp EEEEEETTTTEEEEE--EECC--SSCEEEEEECTTSSCEEEEETTS------CEEEECTTSCEEEEECSSTTSCSSCEEE
T ss_pred cEEEEECCCCcceeE--EeCC--CCCEEEEEEeCCCCEEEEEeCCC------EEEEEECCCCcceeeccCCCCCCCcEEE
Confidence 577777776543211 1110 01122333333334666666542 577777654432222111 111111222
Q ss_pred EEE--CC--EEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeC
Q 014222 212 CVI--NN--CLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQP 285 (428)
Q Consensus 212 ~~~--~~--~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~ 285 (428)
+.+ ++ ..++.|+.+ ..+.+||..+.+-...-.-... ....+.+ ++++.+.|+.+. .+..||.
T Consensus 523 ~~~~~~~~~~~l~s~s~d-------~~v~vwd~~~~~~~~~~~~h~~--~v~~v~~spdg~~l~sg~~Dg---~i~iwd~ 590 (694)
T 3dm0_A 523 VRFSPNTLQPTIVSASWD-------KTVKVWNLSNCKLRSTLAGHTG--YVSTVAVSPDGSLCASGGKDG---VVLLWDL 590 (694)
T ss_dssp EEECSCSSSCEEEEEETT-------SCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEETTS---BCEEEET
T ss_pred EEEeCCCCcceEEEEeCC-------CeEEEEECCCCcEEEEEcCCCC--CEEEEEEeCCCCEEEEEeCCC---eEEEEEC
Confidence 222 22 355666653 5789999987654322111111 1122222 667777766432 3568898
Q ss_pred CCCCeEecCCCCcCCCCCceEEE-CCeEEEEEccCCcEEEEEeCCCCce
Q 014222 286 ETDSWFPVYDGMVAGWRNPSASL-NRHLYALDCKDGCKIRVYDEVTDSW 333 (428)
Q Consensus 286 ~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~i~~yd~~~~~W 333 (428)
.+.+-...- .........+.. ++.+.+.+ .+ ..|.+||.++.+-
T Consensus 591 ~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~-~~-~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 591 AEGKKLYSL--EANSVIHALCFSPNRYWLCAA-TE-HGIKIWDLESKSI 635 (694)
T ss_dssp TTTEEEECC--BCSSCEEEEEECSSSSEEEEE-ET-TEEEEEETTTTEE
T ss_pred CCCceEEEe--cCCCcEEEEEEcCCCcEEEEE-cC-CCEEEEECCCCCC
Confidence 776532211 111111112222 34444444 33 3699999987653
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=90.37 E-value=16 Score=36.82 Aligned_cols=116 Identities=20% Similarity=0.247 Sum_probs=70.1
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCc--eeeCCCCCcC--------CcceeeEEECCEEEEEccccCCCCCC
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNK--WHRAPDMLRR--------RHFFGSCVINNCLYVAGGENGGVHRS 231 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~ 231 (428)
.++.++ .||+... ...++.+|..|.+ |+.-...+.. ....+.++.+++||+....
T Consensus 62 P~v~~g-~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------- 126 (668)
T 1kv9_A 62 PLFHDG-VIYTSMS-------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD------- 126 (668)
T ss_dssp CEEETT-EEEEEEG-------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT-------
T ss_pred CEEECC-EEEEECC-------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC-------
Confidence 345566 8998753 2368889988775 8764432211 1123456778999885421
Q ss_pred CCeEEEEeCCCC--ceEEcCCCCC--CccceEEEEECCEEEEEecCC--CCceeEEEEeCCCCC--eEec
Q 014222 232 LRSAEVYDPNKN--RWSFISDMST--AMVPFIGVVYEGKWFLKGLGS--HRQVLSEAYQPETDS--WFPV 293 (428)
Q Consensus 232 ~~~v~~yd~~t~--~W~~~~~~p~--~~~~~~~~~~~g~lyv~Gg~~--~~~~~i~~yd~~~~~--W~~~ 293 (428)
..+.++|..|. .|+.-...+. .....+.++.++++|+..+.. .....+++||+++++ |+.-
T Consensus 127 -g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 127 -GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp -SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred -CEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 47899998876 5876432211 112233456799998853221 123358999998875 8764
No 255
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=90.28 E-value=10 Score=34.28 Aligned_cols=180 Identities=14% Similarity=0.055 Sum_probs=98.5
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCc---eeeCCCCCcCCcceeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCC
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNK---WHRAPDMLRRRHFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKN 243 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~---W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~ 243 (428)
.||+.-- ....++++++.... +.....+.. -.++++ .++.||+.-.. ...++++|+...
T Consensus 48 ~lyw~D~------~~~~I~r~~~~g~~~~~~~~~~~l~~---p~glavd~~~g~ly~~d~~-------~~~I~~~~~dG~ 111 (318)
T 3sov_A 48 LIYWSDV------SEEAIKRTEFNKTESVQNVVVSGLLS---PDGLACDWLGEKLYWTDSE-------TNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEET------TTTEEEEEETTSSSCCCEEEEECCSC---CCEEEEETTTTEEEEEETT-------TTEEEEEETTSC
T ss_pred EEEEEEC------CCCcEEEEEccCCCceEEEEcCCCCC---ccEEEEEcCCCeEEEEECC-------CCEEEEEECCCC
Confidence 7998832 23578899987652 111111111 123444 47899997432 268899998765
Q ss_pred ceEEcC--CCCCCccceEEEE--ECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEE--ECCeEEEEEc
Q 014222 244 RWSFIS--DMSTAMVPFIGVV--YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSAS--LNRHLYALDC 317 (428)
Q Consensus 244 ~W~~~~--~~p~~~~~~~~~~--~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG 317 (428)
.-+.+. .+..+ ...++ .+|.||+..-. ....|+++++....=+.+.. .....-.+.++ .+++||+...
T Consensus 112 ~~~~l~~~~~~~P---~giavdp~~g~ly~td~~--~~~~I~r~~~dG~~~~~~~~-~~l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 112 LRKVLFWQELDQP---RAIALDPSSGFMYWTDWG--EVPKIERAGMDGSSRFIIIN-SEIYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp SCEEEECSSCSSE---EEEEEEGGGTEEEEEECS--SSCEEEEEETTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEET
T ss_pred cEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC--CCCEEEEEEcCCCCeEEEEE-CCCCCccEEEEeccCCEEEEEEC
Confidence 433332 22111 22333 26899987421 13458899886443222211 00011112333 2789999986
Q ss_pred cCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 318 KDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 318 ~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.. ..|+++|.+...-+.+.. .....+ .+++..++.||+.-- ....|..+|+.+
T Consensus 186 ~~-~~I~~~d~dG~~~~~~~~--~~~~~P-----~glav~~~~lywtd~--~~~~V~~~~~~~ 238 (318)
T 3sov_A 186 KL-NFIHKSNLDGTNRQAVVK--GSLPHP-----FALTLFEDILYWTDW--STHSILACNKYT 238 (318)
T ss_dssp TT-TEEEEEETTSCSCEEEEC--SCCSCE-----EEEEEETTEEEEEET--TTTEEEEEETTT
T ss_pred CC-CEEEEEcCCCCceEEEec--CCCCCc-----eEEEEeCCEEEEEec--CCCeEEEEECCC
Confidence 44 589999987644343322 112222 556667899999843 233577888754
No 256
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.24 E-value=9.5 Score=33.86 Aligned_cols=197 Identities=11% Similarity=-0.000 Sum_probs=96.0
Q ss_pred ceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceee
Q 014222 119 EWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHR 198 (428)
Q Consensus 119 ~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 198 (428)
+.||+.+.. ...++.||+ +++...+.... ....+++...++++|+... ....+.+||+. ++.+.
T Consensus 57 ~~l~~~d~~---~~~i~~~~~-~g~~~~~~~~~-----~~~~gl~~d~dG~l~v~~~------~~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 57 RTLVWSDLV---GRRVLGWRE-DGTVDVLLDAT-----AFTNGNAVDAQQRLVHCEH------GRRAITRSDAD-GQAHL 120 (305)
T ss_dssp TEEEEEETT---TTEEEEEET-TSCEEEEEESC-----SCEEEEEECTTSCEEEEET------TTTEEEEECTT-SCEEE
T ss_pred CEEEEEECC---CCEEEEEeC-CCCEEEEeCCC-----CccceeeECCCCCEEEEEC------CCCEEEEECCC-CCEEE
Confidence 446666522 236788888 45444332211 1123444443336777631 12468888886 55554
Q ss_pred CCCCCc-CC--cceeeEE-ECCEEEEE----ccccC------CCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE-E
Q 014222 199 APDMLR-RR--HFFGSCV-INNCLYVA----GGENG------GVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV-Y 263 (428)
Q Consensus 199 ~~~~~~-~r--~~~~~~~-~~~~iyv~----GG~~~------~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~-~ 263 (428)
+..... .+ .-..+++ -+|.+|+. |.... ........+++||+.+.+.+.+. .... ....+. -
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~-p~gl~~sp 197 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH-PNGLAFSP 197 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS-EEEEEECT
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC-CcceEEcC
Confidence 432111 11 0112222 36788885 32110 00112357999999888877654 1111 112222 2
Q ss_pred CC-EEEEEecCC--CCceeEEEEeCCCCCeEecCC--CCcCCCCCceE-EECCeEEEEEccCCcEEEEEeCCCCceeeCc
Q 014222 264 EG-KWFLKGLGS--HRQVLSEAYQPETDSWFPVYD--GMVAGWRNPSA-SLNRHLYALDCKDGCKIRVYDEVTDSWSKHI 337 (428)
Q Consensus 264 ~g-~lyv~Gg~~--~~~~~i~~yd~~~~~W~~~~~--~~~~~~~~~~~-~~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~ 337 (428)
++ .||+..... .....+++||...+....... ......-...+ --+|.||+..+ ..|.+||++.+.-..+.
T Consensus 198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~---~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG---TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS---SEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC---CcEEEECCCCCEEEEEE
Confidence 45 588874321 012357888876554221110 01111111222 24678888762 36999999776555543
No 257
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.09 E-value=10 Score=34.00 Aligned_cols=141 Identities=7% Similarity=-0.007 Sum_probs=70.5
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceE
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWS 246 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~ 246 (428)
..++.|+.+ ..+.+||..++.......+.........+.+ +++.++.|+.+ ..+.+||..+.+-.
T Consensus 55 ~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~~ 121 (368)
T 3mmy_A 55 NFLIAGSWA------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-------KTAKMWDLSSNQAI 121 (368)
T ss_dssp EEEEEEETT------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEE
T ss_pred eEEEEECCC------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-------CcEEEEEcCCCCce
Confidence 677777754 2588888876332221111111111112222 56666666653 58999999988765
Q ss_pred EcCCCCCCccceEEE---EECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCCcEE
Q 014222 247 FISDMSTAMVPFIGV---VYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDGCKI 323 (428)
Q Consensus 247 ~~~~~p~~~~~~~~~---~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i 323 (428)
........ -..+. .-++.+++.|+.+ ..+..||..+.+-...-. ............+.+++... + ..+
T Consensus 122 ~~~~~~~~--v~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~-~~i 192 (368)
T 3mmy_A 122 QIAQHDAP--VKTIHWIKAPNYSCVMTGSWD---KTLKFWDTRSSNPMMVLQ--LPERCYCADVIYPMAVVATA-E-RGL 192 (368)
T ss_dssp EEEECSSC--EEEEEEEECSSCEEEEEEETT---SEEEEECSSCSSCSEEEE--CSSCEEEEEEETTEEEEEEG-G-GCE
T ss_pred eeccccCc--eEEEEEEeCCCCCEEEEccCC---CcEEEEECCCCcEEEEEe--cCCCceEEEecCCeeEEEeC-C-CcE
Confidence 54322111 11222 2266766666543 247789987764221111 11111112234554444443 2 367
Q ss_pred EEEeCCCC
Q 014222 324 RVYDEVTD 331 (428)
Q Consensus 324 ~~yd~~~~ 331 (428)
.+||....
T Consensus 193 ~~~~~~~~ 200 (368)
T 3mmy_A 193 IVYQLENQ 200 (368)
T ss_dssp EEEECSSS
T ss_pred EEEEeccc
Confidence 88887654
No 258
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.92 E-value=19 Score=36.83 Aligned_cols=179 Identities=9% Similarity=0.097 Sum_probs=96.0
Q ss_pred EEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCC
Q 014222 163 AVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNK 242 (428)
Q Consensus 163 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t 242 (428)
+...++.|++.. ..-+.+||+.++++...... ....-.....-++.|++... ..+.+||+.+
T Consensus 69 ~~d~~g~lWigT--------~~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~~~g~lWigt~---------~Gl~~~~~~~ 130 (758)
T 3ott_A 69 VIIDNTYLYMGT--------DNGILVYNYRADRYEQPETD-FPTDVRTMALQGDTLWLGAL---------NGLYTYQLQS 130 (758)
T ss_dssp EEETTTEEEEEE--------TTEEEEEETTTTEECCCSCC-CCSCEEEEEEETTEEEEEET---------TEEEEEETTT
T ss_pred EEcCCCcEEEEe--------CCCeEEEeCCCCEEECcccC-CCceEEEEEecCCcEEEEcC---------CcceeEeCCC
Confidence 333344677642 23578999999888652111 11111123335778887421 3678999999
Q ss_pred CceEEcC----CCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCC---ceEEE--C-C
Q 014222 243 NRWSFIS----DMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRN---PSASL--N-R 310 (428)
Q Consensus 243 ~~W~~~~----~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~---~~~~~--~-~ 310 (428)
++...+. .++.. ....... +|.|++... .-+.+||+.+++++............ .+... + +
T Consensus 131 ~~~~~~~~~~~~l~~~--~i~~i~~d~~g~lWigt~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~ 203 (758)
T 3ott_A 131 RKLTSFDTRRNGLPNN--TIYSIIRTKDNQIYVGTY-----NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQ 203 (758)
T ss_dssp CCEEEECHHHHCCSCS--CEEEEEECTTCCEEEEET-----TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTT
T ss_pred CeEEEeccCCCCcCCC--eEEEEEEcCCCCEEEEeC-----CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCC
Confidence 8887663 22221 1112222 678888431 13679999998887654211111111 11222 2 3
Q ss_pred eEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEE-eCCeEEEEeCCCeEEEEEeecCCC
Q 014222 311 HLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVP-LNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 311 ~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.|++.. . ..++.||+.++++.....++... -.++.. -++.|+|-. ..+ +..||+.+
T Consensus 204 ~lWigt--~-~Gl~~~~~~~~~~~~~~~l~~~~-------i~~i~~d~~g~lWigT-~~G---l~~~~~~~ 260 (758)
T 3ott_A 204 CVWIGT--E-GYLFQYFPSTGQIKQTEAFHNNS-------IKSLALDGNGDLLAGT-DNG---LYVYHNDT 260 (758)
T ss_dssp EEEEEE--E-EEEEEEETTTTEEEEEEEEEEEE-------EEEEEECTTCCEEEEE-TTE---EEEECCTT
T ss_pred EEEEEE--C-CCCeEEcCCCCeEEeccCCCCCe-------EEEEEEcCCCCEEEEe-CCc---eeEEecCC
Confidence 477643 1 36999999999887654332110 122222 256777744 222 56777776
No 259
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=89.89 E-value=7.5 Score=33.26 Aligned_cols=138 Identities=8% Similarity=-0.026 Sum_probs=73.7
Q ss_pred eCCEEEEEeeeCCCCCCCceEEEEE---------------CCCCceeeCCCCCcCCcceeeEE--ECCEEEEEccccCCC
Q 014222 166 SGCHLYLFGGKDPLKGSMRRVIFYS---------------ARTNKWHRAPDMLRRRHFFGSCV--INNCLYVAGGENGGV 228 (428)
Q Consensus 166 ~~~~lyv~GG~~~~~~~~~~v~~yd---------------~~t~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~ 228 (428)
.| ++|+|-|. .+|+++ +.+..|..+|..+.......+++ .++++|++-|
T Consensus 13 ~g-e~~fFk~~--------~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg----- 78 (225)
T 3oyo_A 13 EY-EVYFFAKN--------KYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG----- 78 (225)
T ss_dssp TT-EEEEEETT--------EEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET-----
T ss_pred CC-EEEEEECC--------EEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC-----
Confidence 35 89998542 466666 12334555553322223333444 4799999976
Q ss_pred CCCCCeEEEEeCCCC----ceEE--------cCCCCCC--ccceEEEE---ECCEEEEEecCCCCceeEEEEeCCCCCeE
Q 014222 229 HRSLRSAEVYDPNKN----RWSF--------ISDMSTA--MVPFIGVV---YEGKWFLKGLGSHRQVLSEAYQPETDSWF 291 (428)
Q Consensus 229 ~~~~~~v~~yd~~t~----~W~~--------~~~~p~~--~~~~~~~~---~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~ 291 (428)
+.+++||..++ .-.. .+.+|.. ....-++. .++++|++-|. ..++||...++-.
T Consensus 79 ----~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~-----~yw~~d~~~~~~~ 149 (225)
T 3oyo_A 79 ----NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGN-----KYVRIAYDSKQLV 149 (225)
T ss_dssp ----TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETT-----EEEEEETTTTEEE
T ss_pred ----CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCC-----eEEEEECCCCeec
Confidence 36788865321 1111 0122321 01222333 27899999763 3578887665543
Q ss_pred e----cCC-CCcC-----CCCCceE-E--ECCeEEEEEccCCcEEEEEeCC
Q 014222 292 P----VYD-GMVA-----GWRNPSA-S--LNRHLYALDCKDGCKIRVYDEV 329 (428)
Q Consensus 292 ~----~~~-~~~~-----~~~~~~~-~--~~~~lyv~gG~~~~~i~~yd~~ 329 (428)
. +.. .+.. ....-+| . .++++|++-| +..|+||..
T Consensus 150 ~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG---~~ywr~d~~ 197 (225)
T 3oyo_A 150 GNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG---QNYVRIDFT 197 (225)
T ss_dssp EEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET---TEEEEEECC
T ss_pred CCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC---CEEEEEeCC
Confidence 2 111 1111 1112234 3 3799999986 579999998
No 260
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=89.76 E-value=10 Score=33.51 Aligned_cols=189 Identities=8% Similarity=0.048 Sum_probs=89.3
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCC--ceeeCCCCCcCCccee-eEEE---CCEEEEEccccCCCCCCCCeEEEEeCCC
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTN--KWHRAPDMLRRRHFFG-SCVI---NNCLYVAGGENGGVHRSLRSAEVYDPNK 242 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~r~~~~-~~~~---~~~iyv~GG~~~~~~~~~~~v~~yd~~t 242 (428)
..++.|+.+ ..+.+||..++ .++.+..+........ ++.. ++.+++.|+.+ ..+.+||..+
T Consensus 24 ~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-------g~v~vwd~~~ 90 (351)
T 3f3f_A 24 RHVATCSSD------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-------KTVKLWEEDP 90 (351)
T ss_dssp SEEEEEETT------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-------SCEEEEEECT
T ss_pred CEEEEeeCC------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-------CeEEEEecCC
Confidence 566666644 25777777643 3343332222222222 2222 36677777764 4688888876
Q ss_pred C-------ceEEcCCCCCCccceEEEEE--C--CEEEEEecCCCCceeEEEEeCCCCC----eEec-----CCCCcCCCC
Q 014222 243 N-------RWSFISDMSTAMVPFIGVVY--E--GKWFLKGLGSHRQVLSEAYQPETDS----WFPV-----YDGMVAGWR 302 (428)
Q Consensus 243 ~-------~W~~~~~~p~~~~~~~~~~~--~--g~lyv~Gg~~~~~~~i~~yd~~~~~----W~~~-----~~~~~~~~~ 302 (428)
. .|..+..+.........+.. + +.+++.|+.+ ..+..||..+.+ |... ....+....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND---GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHL 167 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCS
T ss_pred CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC---CcEEEecCCChHHhccccccccccccccccCCcc
Confidence 4 23333222211122222222 2 5555555532 246788876654 2210 000111111
Q ss_pred Cc--eEEE-----CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCC----eEEEEeCCCeEE
Q 014222 303 NP--SASL-----NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNG----KLCIIRNNMSIS 371 (428)
Q Consensus 303 ~~--~~~~-----~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~----~lyv~GG~~~~~ 371 (428)
.. ++.. ++.++++++.++ .+..++........+..+....... .......++ ++++.|+.++.
T Consensus 168 ~~~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~i----~~~~~~p~~~~~~~~l~s~~~dg~- 241 (351)
T 3f3f_A 168 QSDFCLSWCPSRFSPEKLAVSALEQ-AIIYQRGKDGKLHVAAKLPGHKSLI----RSISWAPSIGRWYQLIATGCKDGR- 241 (351)
T ss_dssp CCCEEEEECCCSSSCCEEEEEETTE-EEEEEECTTSCEEEEEECCCCCSCE----EEEEECCCSSCSSEEEEEEETTSC-
T ss_pred cceeEEEeccCCCCCcEEEEecCCC-cEEEEccCCCceeeeeecCCCCcce----eEEEECCCCCCcceEEEEEcCCCe-
Confidence 11 2222 367777777654 5566666666665554433222111 122333344 78888876653
Q ss_pred EEEeecCCC
Q 014222 372 LVDVSKSNG 380 (428)
Q Consensus 372 ~v~~yd~~~ 380 (428)
+.+||..+
T Consensus 242 -i~iwd~~~ 249 (351)
T 3f3f_A 242 -IRIFKITE 249 (351)
T ss_dssp -EEEEEEEE
T ss_pred -EEEEeCCC
Confidence 34555443
No 261
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=89.64 E-value=20 Score=36.61 Aligned_cols=249 Identities=9% Similarity=-0.049 Sum_probs=122.6
Q ss_pred cceEEEEeeCCC-CceeEEEEeCC---CCceEeCCCC---CCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEE
Q 014222 118 EEWIYVIKRDRE-GKISWHAFDPI---YQLWQPLPPI---PKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFY 189 (428)
Q Consensus 118 ~~~l~v~gg~~~-~~~~~~~yd~~---~~~W~~l~~~---~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~y 189 (428)
++++|....+.. ....++..+.. .+.|..+-.. .... .....+.+.. +| +.++++...+.. ....++++
T Consensus 118 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~-~~~~~~~~~SPDG-~~la~~~~~~G~-e~~~i~v~ 194 (741)
T 1yr2_A 118 GASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDG-ATALDAWAASDDG-RLLAYSVQDGGS-DWRTVKFV 194 (741)
T ss_dssp TTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC-----EEEEEEEECTTS-SEEEEEEEETTC-SEEEEEEE
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCC-CEEEEeEEECCCC-CEEEEEEcCCCC-ceEEEEEE
Confidence 455655543322 23567888876 6677765221 1110 0011122233 34 455554332211 23579999
Q ss_pred ECCCCceeeCCCCCcCCcceeeEEE-CCEEEEEccccCCC-------CCCCCeEEEEeCCCCce--EEcCCCCC-Cccce
Q 014222 190 SARTNKWHRAPDMLRRRHFFGSCVI-NNCLYVAGGENGGV-------HRSLRSAEVYDPNKNRW--SFISDMST-AMVPF 258 (428)
Q Consensus 190 d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~-------~~~~~~v~~yd~~t~~W--~~~~~~p~-~~~~~ 258 (428)
|..+++..... .+.... ...+.. +..||.. ..+... ......++.++..+..- ..+-..+. +....
T Consensus 195 dl~tg~~~~~~-~~~~~~-~~~~wspD~~l~~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~ 271 (741)
T 1yr2_A 195 GVADGKPLADE-LKWVKF-SGLAWLGNDALLYS-RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGH 271 (741)
T ss_dssp ETTTCCEEEEE-EEEEES-CCCEESTTSEEEEE-ECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred ECCCCCCCCcc-CCCcee-ccEEEECCCEEEEE-EecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEE
Confidence 99999875431 111110 112221 3334443 322110 11235688888877652 12222221 11112
Q ss_pred E-EEEECCE-EEEEecCC-CCceeEEEEeCCCC--C-eEecCCCCcCCCCCceEEECCeEEEEEccC--CcEEEEEeCCC
Q 014222 259 I-GVVYEGK-WFLKGLGS-HRQVLSEAYQPETD--S-WFPVYDGMVAGWRNPSASLNRHLYALDCKD--GCKIRVYDEVT 330 (428)
Q Consensus 259 ~-~~~~~g~-lyv~Gg~~-~~~~~i~~yd~~~~--~-W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~--~~~i~~yd~~~ 330 (428)
. ...-+|+ |++..... .....++.+|..+. . |..+..... ........-++.||+....+ ...|+.+|.++
T Consensus 272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK-AQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-SCEEEEEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 2 2223665 33333222 12445788898776 6 887764222 11112223567788776432 24799999988
Q ss_pred --CceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 331 --DSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 331 --~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
..|+.+..- .. .. -..+...+++|++.........++++|...
T Consensus 351 ~~~~~~~l~~~--~~-~~----l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g 395 (741)
T 1yr2_A 351 STPRFDTVVPE--SK-DN----LESVGIAGNRLFASYIHDAKSQVLAFDLDG 395 (741)
T ss_dssp SSCEEEEEECC--CS-SE----EEEEEEEBTEEEEEEEETTEEEEEEEETTS
T ss_pred CccccEEEecC--CC-Ce----EEEEEEECCEEEEEEEECCEEEEEEEeCCC
Confidence 578876421 11 11 122334488888887766777788888655
No 262
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=89.53 E-value=11 Score=33.72 Aligned_cols=188 Identities=11% Similarity=0.057 Sum_probs=90.0
Q ss_pred cceEEEEeeCC-CCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeC-----------------C
Q 014222 118 EEWIYVIKRDR-EGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKD-----------------P 178 (428)
Q Consensus 118 ~~~l~v~gg~~-~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~-----------------~ 178 (428)
+..|+...... .....++.+|..+++...+...+ . ....+.. +|..|++..... +
T Consensus 70 g~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-----~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g 143 (347)
T 2gop_A 70 GKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-----N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDD 143 (347)
T ss_dssp SSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-----E-EEEEEECTTSSEEEEEEECCCC---------CCCC---
T ss_pred CCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-----C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecC
Confidence 34444443222 24567899999888766654322 1 1122222 443444443210 0
Q ss_pred C---CCCCceEEEEECCCCce-eeCCCCCcCCcceeeEEE-CCEEEEEccccCCCCC--C-CCeEEEEeCCCCceEEcCC
Q 014222 179 L---KGSMRRVIFYSARTNKW-HRAPDMLRRRHFFGSCVI-NNCLYVAGGENGGVHR--S-LRSAEVYDPNKNRWSFISD 250 (428)
Q Consensus 179 ~---~~~~~~v~~yd~~t~~W-~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~--~-~~~v~~yd~~t~~W~~~~~ 250 (428)
. ......++++|..+++. +.+.. + .....+.. ++ +++.+..... .. . ...++.+| +.++..+..
T Consensus 144 ~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~~~~~~~~-~~~~~~~~~l~~~d--~~~~~~l~~ 215 (347)
T 2gop_A 144 LGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVVNVPHREI-IPQYFKFWDIYIWE--DGKEEKMFE 215 (347)
T ss_dssp ------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEEEEECCCS-SCCSSCCEEEEEEE--TTEEEEEEE
T ss_pred cccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEEEEecccc-cccccccccEEEeC--CCceEEecc
Confidence 0 00135799999998877 55544 2 22222333 45 5555543211 01 1 34788888 666766543
Q ss_pred CCCCccceEEEEECCE-EEEEecCCC----CceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCC-cEEE
Q 014222 251 MSTAMVPFIGVVYEGK-WFLKGLGSH----RQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDG-CKIR 324 (428)
Q Consensus 251 ~p~~~~~~~~~~~~g~-lyv~Gg~~~----~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~-~~i~ 324 (428)
- .......-+|+ |++.+.... ....++.+| ++++..+........ .......+.+|+.+..++ ..+|
T Consensus 216 ~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~-~~~~~~sdg~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 216 K----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGV-GQAKIKDGKVYFTLFEEGSVNLY 288 (347)
T ss_dssp E----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEE-EEEEEETTEEEEEEEETTEEEEE
T ss_pred C----cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCccc-CCccEEcCcEEEEEecCCcEEEE
Confidence 2 11222245665 444332211 234588888 667776643211111 111222233777765544 3566
Q ss_pred EEe
Q 014222 325 VYD 327 (428)
Q Consensus 325 ~yd 327 (428)
++
T Consensus 289 -~~ 290 (347)
T 2gop_A 289 -IW 290 (347)
T ss_dssp -EE
T ss_pred -Ec
Confidence 66
No 263
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=89.53 E-value=12 Score=34.18 Aligned_cols=177 Identities=6% Similarity=-0.091 Sum_probs=89.0
Q ss_pred eeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcce--
Q 014222 132 ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFF-- 209 (428)
Q Consensus 132 ~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~-- 209 (428)
..+.++|+.+.+-....... ..-.+++...++++++.++. ..+.+++..++...............
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~-----~~V~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETR-----GEVKDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp CEEEEEETTTTEEEEEEECS-----SCCCEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred CEEEEeECCCCcEEEEeCCC-----CceEEEEEccCCceEEeccc-------eeEEEEEeccCcceeeeecCCCCCCEEE
Confidence 36788898887654322111 12334554444356665542 24677787776643322111111111
Q ss_pred eeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcC--CCCCCccceEEEE--ECCEEEEEecCCCCceeEEEEeC
Q 014222 210 GSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFIS--DMSTAMVPFIGVV--YEGKWFLKGLGSHRQVLSEAYQP 285 (428)
Q Consensus 210 ~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~~~~~~~~~--~~g~lyv~Gg~~~~~~~i~~yd~ 285 (428)
....-+++.++.++.+. .....+..+|.......... .+........++. -+|++.+.|+.+. ++..||.
T Consensus 225 v~fspdg~~l~~~s~d~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~---~V~iwd~ 298 (365)
T 4h5i_A 225 INFIADDTVLIAASLKK---GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN---SIALVKL 298 (365)
T ss_dssp EEEEETTEEEEEEEESS---SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS---CEEEEET
T ss_pred EEEcCCCCEEEEEecCC---cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC---EEEEEEC
Confidence 22234788888777642 11234666776666554322 1111111112222 2788777776532 4678998
Q ss_pred CCCCeEecCCCCcCCCCCc--eEEE--CCeEEEEEccCCcEEEEEeCCC
Q 014222 286 ETDSWFPVYDGMVAGWRNP--SASL--NRHLYALDCKDGCKIRVYDEVT 330 (428)
Q Consensus 286 ~~~~W~~~~~~~~~~~~~~--~~~~--~~~lyv~gG~~~~~i~~yd~~~ 330 (428)
.+.+-.. .... ..... ++.+ ++++.+.|+.++ .|.+||...
T Consensus 299 ~~~~~~~--~~~~-gH~~~V~~v~fSpdg~~laS~S~D~-tvrvw~ip~ 343 (365)
T 4h5i_A 299 KDLSMSK--IFKQ-AHSFAITEVTISPDSTYVASVSAAN-TIHIIKLPL 343 (365)
T ss_dssp TTTEEEE--EETT-SSSSCEEEEEECTTSCEEEEEETTS-EEEEEECCT
T ss_pred CCCcEEE--EecC-cccCCEEEEEECCCCCEEEEEeCCC-eEEEEEcCC
Confidence 8765321 1111 11111 2233 678777777664 889988643
No 264
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=89.26 E-value=0.085 Score=52.74 Aligned_cols=36 Identities=17% Similarity=0.456 Sum_probs=28.8
Q ss_pred CCCCCChHHHHHHhccccc-CCccchhhhchHhHHhh
Q 014222 66 PLLPGLPDDLAIACLIRVP-RVEHCKLRLVCKRWHRL 101 (428)
Q Consensus 66 ~~~~~lpddl~~~il~rlp-~~~l~~~~~v~k~W~~l 101 (428)
..|..||||++.+|+.++| .++..+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 3678899999999999999 88999999999999988
No 265
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=89.02 E-value=20 Score=36.00 Aligned_cols=60 Identities=10% Similarity=-0.108 Sum_probs=32.6
Q ss_pred eEEEEeCCCCce-EEcCCCCCC---ccceE--EEEECCEEEEEecC-CCCceeEEEEeCCCCCeEec
Q 014222 234 SAEVYDPNKNRW-SFISDMSTA---MVPFI--GVVYEGKWFLKGLG-SHRQVLSEAYQPETDSWFPV 293 (428)
Q Consensus 234 ~v~~yd~~t~~W-~~~~~~p~~---~~~~~--~~~~~g~lyv~Gg~-~~~~~~i~~yd~~~~~W~~~ 293 (428)
.+.++|..+.+- ..+...... ..... ...-+|++.+.... ......++.+|+.+.+...+
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 688899988762 444322111 11111 22237876655432 22334588999988876554
No 266
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=88.75 E-value=9.9 Score=32.03 Aligned_cols=145 Identities=12% Similarity=0.047 Sum_probs=75.8
Q ss_pred EEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceee--C----CCCCcCCcceeeEE-E--CCEEEEEccccCCCCCC
Q 014222 161 GCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHR--A----PDMLRRRHFFGSCV-I--NNCLYVAGGENGGVHRS 231 (428)
Q Consensus 161 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~--~----~~~~~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~ 231 (428)
+++...| ++|+|=|. .+|+++.....+.. + +.+|. ...++. . ++++|++-|
T Consensus 28 Ai~~~~g-~~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~wp~Lp~---~iDAa~~~~~~~~iyfFkG-------- 87 (207)
T 1pex_A 28 AITSLRG-ETMIFKDR--------FFWRLHPQQVDAELFLTKSFWPELPN---RIDAAYEHPSHDLIFIFRG-------- 87 (207)
T ss_dssp EEEEETT-EEEEEETT--------EEEEECSSSSCCEEEEHHHHCTTSCS---SCCEEEEETTTTEEEEEET--------
T ss_pred EEEeCCC-cEEEEECC--------EEEEEeCCCcCCCceehhHhccCCCC---CccEEEEeccCCcEEEEcc--------
Confidence 3444555 89999542 56777654432211 1 22332 222332 2 589999976
Q ss_pred CCeEEEEeCCCCce---EEcCC--CCCCccceEEEEE---CCEEEEEecCCCCceeEEEEeCCCCCeEe-----cCC-CC
Q 014222 232 LRSAEVYDPNKNRW---SFISD--MSTAMVPFIGVVY---EGKWFLKGLGSHRQVLSEAYQPETDSWFP-----VYD-GM 297 (428)
Q Consensus 232 ~~~v~~yd~~t~~W---~~~~~--~p~~~~~~~~~~~---~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~-----~~~-~~ 297 (428)
+.+++|+..+-.- ..+.. +|......-++.. ++++|++-|. ..+.||..+++=.. +.. .+
T Consensus 88 -~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~-----~ywr~d~~~~~~d~gyPr~i~~~~~ 161 (207)
T 1pex_A 88 -RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN-----QVWRYDDTNHIMDKDYPRLIEEDFP 161 (207)
T ss_dssp -TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT-----EEEEEETTTTEECSSCCCBHHHHST
T ss_pred -CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC-----EEEEEeCcCccccCCCCccHHHcCC
Confidence 3567776432211 12222 2321112223332 5899999663 35889887643110 000 00
Q ss_pred cCC-CCCceEEECCeEEEEEccCCcEEEEEeCCCCcee
Q 014222 298 VAG-WRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWS 334 (428)
Q Consensus 298 ~~~-~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~ 334 (428)
... .-.++...++++|++-| +..|.||..+++=.
T Consensus 162 Gip~~iDaAf~~~g~~YfFkg---~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 162 GIGDKVDAVYEKNGYIYFFNG---PIQFEYSIWSNRIV 196 (207)
T ss_dssp TSCSCCSEEEEETTEEEEEET---TEEEEEETTTTEEE
T ss_pred CCCCCccEEEEcCCcEEEEEC---CEEEEEeCCccEEe
Confidence 011 11233456999999976 57999999876543
No 267
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=88.54 E-value=20 Score=35.41 Aligned_cols=184 Identities=11% Similarity=0.063 Sum_probs=91.0
Q ss_pred EEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEE
Q 014222 170 LYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF 247 (428)
Q Consensus 170 lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~ 247 (428)
.++.|+.++ .+.+||..+.+... .+.........+.+ ++++++.|+.+ ..+.+||..+.+-..
T Consensus 162 ~l~s~s~D~------~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D-------~~i~lwd~~~g~~~~ 226 (611)
T 1nr0_A 162 RIISGSDDN------TVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGD-------GTIVLYNGVDGTKTG 226 (611)
T ss_dssp EEEEEETTS------CEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCEEE
T ss_pred EEEEEeCCC------eEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECC-------CcEEEEECCCCcEee
Confidence 566676542 57788876554322 12111111112222 57777877764 578899987765432
Q ss_pred -cCCC-CC--Cccc-eEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCC-CCCceEEECCeEEEEEccC
Q 014222 248 -ISDM-ST--AMVP-FIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAG-WRNPSASLNRHLYALDCKD 319 (428)
Q Consensus 248 -~~~~-p~--~~~~-~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~-~~~~~~~~~~~lyv~gG~~ 319 (428)
+... .. .... ...+.. +++..+.|+.+ ..+..||..+.+....-...... .....+..++..++.++.+
T Consensus 227 ~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 227 VFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp ECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred eeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 2110 00 1111 112222 66666666543 24678999877654321111100 1111334566666666655
Q ss_pred CcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 320 GCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 320 ~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+ .+..||+.+..-... +....... .......+++.++.|+.+. .+.+||..+
T Consensus 304 ~-~i~~~~~~~~~~~~~--~~gh~~~v----~~l~~spdg~~l~s~s~D~--~v~~Wd~~~ 355 (611)
T 1nr0_A 304 G-FINFVNPELGSIDQV--RYGHNKAI----TALSSSADGKTLFSADAEG--HINSWDIST 355 (611)
T ss_dssp C-CEEEEETTTTEEEEE--ECCCSSCE----EEEEECTTSSEEEEEETTS--CEEEEETTT
T ss_pred C-cEEEEeCCCCCcceE--EcCCCCCE----EEEEEeCCCCEEEEEeCCC--cEEEEECCC
Confidence 4 788899877652221 11111111 1223344667777776554 244666554
No 268
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=88.54 E-value=14 Score=33.36 Aligned_cols=141 Identities=11% Similarity=0.107 Sum_probs=65.0
Q ss_pred CCEEEEEccccCCCCCCCCeEEEEeCCCCceEE-cCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeE
Q 014222 215 NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF-ISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWF 291 (428)
Q Consensus 215 ~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~ 291 (428)
++.+.+.|+.+ ..+.+||..+.+... +..-. .....+.+ +++..+.|+... .+..||.....-.
T Consensus 87 ~~~~l~s~s~D-------~~v~lwd~~~~~~~~~~~~h~---~~v~~v~~sp~~~~l~s~~~d~---~i~~wd~~~~~~~ 153 (343)
T 2xzm_R 87 ENCFAISSSWD-------KTLRLWDLRTGTTYKRFVGHQ---SEVYSVAFSPDNRQILSAGAER---EIKLWNILGECKF 153 (343)
T ss_dssp STTEEEEEETT-------SEEEEEETTSSCEEEEEECCC---SCEEEEEECSSTTEEEEEETTS---CEEEEESSSCEEE
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCcEEEEEcCCC---CcEEEEEECCCCCEEEEEcCCC---EEEEEeccCCcee
Confidence 45566666654 588999998765422 21111 11112222 555555555432 3567887643322
Q ss_pred ecCCCCcCCCCCceEEEC------------CeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCC
Q 014222 292 PVYDGMVAGWRNPSASLN------------RHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNG 359 (428)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~------------~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~ 359 (428)
.............++.+. +.+++.|+.++ .|.+||..... ...+...... ........++
T Consensus 154 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~---~~~~~~h~~~----v~~~~~s~~g 225 (343)
T 2xzm_R 154 SSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG-RLKVWNTNFQI---RYTFKAHESN----VNHLSISPNG 225 (343)
T ss_dssp ECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS-EEEEEETTTEE---EEEEECCSSC----EEEEEECTTS
T ss_pred eeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC-EEEEEcCCCce---eEEEcCcccc----ceEEEECCCC
Confidence 221100000001112221 24566666654 88999954321 1111111111 1123334567
Q ss_pred eEEEEeCCCeEEEEEeecC
Q 014222 360 KLCIIRNNMSISLVDVSKS 378 (428)
Q Consensus 360 ~lyv~GG~~~~~~v~~yd~ 378 (428)
+.++.|+.++ .+.+||.
T Consensus 226 ~~l~sgs~dg--~v~iwd~ 242 (343)
T 2xzm_R 226 KYIATGGKDK--KLLIWDI 242 (343)
T ss_dssp SEEEEEETTC--EEEEEES
T ss_pred CEEEEEcCCC--eEEEEEC
Confidence 7777777654 3456666
No 269
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=88.49 E-value=17 Score=34.43 Aligned_cols=116 Identities=9% Similarity=-0.069 Sum_probs=62.1
Q ss_pred cceEEEEeeCCCCc-eeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCC---CCCCCceEEEEECC
Q 014222 118 EEWIYVIKRDREGK-ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDP---LKGSMRRVIFYSAR 192 (428)
Q Consensus 118 ~~~l~v~gg~~~~~-~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~---~~~~~~~v~~yd~~ 192 (428)
...+||........ ..+.++|+.+++-. ..++.. ... ++++. ++..+|+.--... .....+.+.++|+.
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv--~~I~vG---~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRIL--GMTDGG---FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEE--EEEEEC---SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEE--EEEECC---CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 46788887432111 78999999887643 233322 112 44444 4446888742100 00013579999999
Q ss_pred CCceeeCCCCC-cCC-----cceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCce
Q 014222 193 TNKWHRAPDML-RRR-----HFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRW 245 (428)
Q Consensus 193 t~~W~~~~~~~-~~r-----~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W 245 (428)
|++-..--+++ .+| .-+.+++- +.++||..-. ..+.+.++|+.+.+=
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~------~~~~VsVID~~t~kv 212 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS------PAPAVGVVDLEGKTF 212 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS------SSCEEEEEETTTTEE
T ss_pred CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC------CCCeEEEEECCCCeE
Confidence 98743211111 111 12233332 4578886321 136789999988753
No 270
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=88.49 E-value=10 Score=31.92 Aligned_cols=143 Identities=8% Similarity=-0.055 Sum_probs=74.5
Q ss_pred eEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEE--c----CCCCCCccceEEEEE--CCEEEEEecCCCCceeEEE
Q 014222 211 SCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF--I----SDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEA 282 (428)
Q Consensus 211 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~--~----~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~ 282 (428)
++..+|++|++-| ..++.++.....+.. + +.+|.. --++... ++++|++-|. ..++
T Consensus 29 i~~~~g~~y~Fkg---------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~--iDAa~~~~~~~~iyfFkG~-----~~w~ 92 (207)
T 1pex_A 29 ITSLRGETMIFKD---------RFFWRLHPQQVDAELFLTKSFWPELPNR--IDAAYEHPSHDLIFIFRGR-----KFWA 92 (207)
T ss_dssp EEEETTEEEEEET---------TEEEEECSSSSCCEEEEHHHHCTTSCSS--CCEEEEETTTTEEEEEETT-----EEEE
T ss_pred EEeCCCcEEEEEC---------CEEEEEeCCCcCCCceehhHhccCCCCC--ccEEEEeccCCcEEEEccC-----EEEE
Confidence 4457899999966 356666654433321 1 234422 1223333 6899999653 2466
Q ss_pred EeCCCCCe---EecCC--CCcCCCCCceEE-E--CCeEEEEEccCCcEEEEEeCCCCceeeC-----cccccccCCcccc
Q 014222 283 YQPETDSW---FPVYD--GMVAGWRNPSAS-L--NRHLYALDCKDGCKIRVYDEVTDSWSKH-----IDSKMHLGNSRAL 349 (428)
Q Consensus 283 yd~~~~~W---~~~~~--~~~~~~~~~~~~-~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v-----~~~~~~~~~~~~~ 349 (428)
|+..+-.- ..+.. .+......-+|+ . ++++|++-| +..|+||..+++=..- ...-...+.
T Consensus 93 ~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG---~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~---- 165 (207)
T 1pex_A 93 LNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG---NQVWRYDDTNHIMDKDYPRLIEEDFPGIGD---- 165 (207)
T ss_dssp ESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET---TEEEEEETTTTEECSSCCCBHHHHSTTSCS----
T ss_pred EeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC---CEEEEEeCcCccccCCCCccHHHcCCCCCC----
Confidence 76322111 12221 111101122333 2 489999976 5899999876532210 000000111
Q ss_pred cceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 350 EAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 350 ~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.--+++..++++|++-|. ..+.||..+
T Consensus 166 ~iDaAf~~~g~~YfFkg~----~y~rf~~~~ 192 (207)
T 1pex_A 166 KVDAVYEKNGYIYFFNGP----IQFEYSIWS 192 (207)
T ss_dssp CCSEEEEETTEEEEEETT----EEEEEETTT
T ss_pred CccEEEEcCCcEEEEECC----EEEEEeCCc
Confidence 113444579999999876 356788766
No 271
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=87.71 E-value=15 Score=32.96 Aligned_cols=140 Identities=7% Similarity=-0.045 Sum_probs=74.9
Q ss_pred CEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEE
Q 014222 168 CHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF 247 (428)
Q Consensus 168 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~ 247 (428)
..+|+++.. ...+++||+.+++.+.+. .+. .....+..-++++++... ..+.+||+.+.+.+.
T Consensus 61 ~~l~~~d~~------~~~i~~~d~~~~~~~~~~-~~~-~v~~i~~~~dg~l~v~~~---------~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 61 GTAWWFNIL------ERELHELHLASGRKTVHA-LPF-MGSALAKISDSKQLIASD---------DGLFLRDTATGVLTL 123 (326)
T ss_dssp TEEEEEEGG------GTEEEEEETTTTEEEEEE-CSS-CEEEEEEEETTEEEEEET---------TEEEEEETTTCCEEE
T ss_pred CEEEEEECC------CCEEEEEECCCCcEEEEE-CCC-cceEEEEeCCCeEEEEEC---------CCEEEEECCCCcEEE
Confidence 368877543 237899999887655432 121 111112234788877531 358999999988876
Q ss_pred cCCCCCC----ccceEEEEECCEEEEEecCC---CCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE-CC-eEEEEEcc
Q 014222 248 ISDMSTA----MVPFIGVVYEGKWFLKGLGS---HRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL-NR-HLYALDCK 318 (428)
Q Consensus 248 ~~~~p~~----~~~~~~~~~~g~lyv~Gg~~---~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~lyv~gG~ 318 (428)
+...+.. +....++.-+|++|+..... .....+++|| +.+...+.... ......+.. ++ .||+....
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~--~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI--SIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE--SSEEEEEECTTSCEEEEEETT
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC--cccCCeEEcCCCCEEEEEECC
Confidence 6443221 11111222367888753211 1234578888 45555442211 111112222 44 57877643
Q ss_pred CCcEEEEEeCC
Q 014222 319 DGCKIRVYDEV 329 (428)
Q Consensus 319 ~~~~i~~yd~~ 329 (428)
...|++||.+
T Consensus 200 -~~~I~~~d~~ 209 (326)
T 2ghs_A 200 -VNRLMRVPLD 209 (326)
T ss_dssp -TCEEEEEEBC
T ss_pred -CCEEEEEEcc
Confidence 3589999975
No 272
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=87.64 E-value=24 Score=35.26 Aligned_cols=174 Identities=13% Similarity=0.036 Sum_probs=93.6
Q ss_pred eEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEE
Q 014222 185 RVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVV 262 (428)
Q Consensus 185 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~ 262 (428)
++.+.|..+..-..+-++..-+...++++. +++||+.-.. ...+.++++.....+.+...... ....+++
T Consensus 16 ~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~-------~~~I~r~~~~g~~~~~v~~~g~~-~P~GlAv 87 (628)
T 4a0p_A 16 DIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS-------LKTISRAFMNGSALEHVVEFGLD-YPEGMAV 87 (628)
T ss_dssp EEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCS-CCCEEEE
T ss_pred cEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC-------CCeEEEEECCCCCcEEEEeCCCC-CcceEEE
Confidence 677777766543332222222233344443 6899998543 36888999877655554322111 1123333
Q ss_pred --ECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCc--eEEE--CCeEEEEEccCCcEEEEEeCCCCceeeC
Q 014222 263 --YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNP--SASL--NRHLYALDCKDGCKIRVYDEVTDSWSKH 336 (428)
Q Consensus 263 --~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~--~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v 336 (428)
.+++||+.-.. ...|+++|+....=+.+.. .....+ .++- +|.||+........|++.+++...-+.+
T Consensus 88 D~~~~~LY~tD~~---~~~I~v~~~dG~~~~~l~~---~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l 161 (628)
T 4a0p_A 88 DWLGKNLYWADTG---TNRIEVSKLDGQHRQVLVW---KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTL 161 (628)
T ss_dssp ETTTTEEEEEETT---TTEEEEEETTSTTCEEEEC---SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred EeCCCEEEEEECC---CCEEEEEecCCCcEEEEEe---CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEE
Confidence 47899998432 2357888886543222221 111122 2332 6899999743345899999987765544
Q ss_pred cccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 337 IDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.. ....+ .+.++-..+++||+.-... ..|+.+|++.
T Consensus 162 ~~---~~~~P---~GlalD~~~~~LY~aD~~~--~~I~~~d~dG 197 (628)
T 4a0p_A 162 VP---NVGRA---NGLTIDYAKRRLYWTDLDT--NLIESSNMLG 197 (628)
T ss_dssp EC---SCSSE---EEEEEETTTTEEEEEETTT--TEEEEEETTS
T ss_pred EC---CCCCc---ceEEEccccCEEEEEECCC--CEEEEEcCCC
Confidence 32 11222 1222223368899875422 2456666654
No 273
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=87.29 E-value=30 Score=36.89 Aligned_cols=141 Identities=16% Similarity=0.054 Sum_probs=74.5
Q ss_pred eEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEE-EEeCCCCceEEcCCCCCCccceEEEEE
Q 014222 185 RVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAE-VYDPNKNRWSFISDMSTAMVPFIGVVY 263 (428)
Q Consensus 185 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~-~yd~~t~~W~~~~~~p~~~~~~~~~~~ 263 (428)
.+++++..+.....+...+..+....... +++.++.++. ...++ +||..+.+-..+.. ........+..-
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-------~~~l~~~~d~~~~~~~~l~~-~~~~~~~~~~Sp 388 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-------EGDFLGIYDYRTGKAEKFEE-NLGNVFAMGVDR 388 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-------TEEEEEEEETTTCCEEECCC-CCCSEEEEEECT
T ss_pred EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-------CCceEEEEECCCCCceEecC-CccceeeeEECC
Confidence 68888888776665533222111122222 5554444432 14778 89998887666551 111111122223
Q ss_pred CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccC---------CcEEEEEeCCCCcee
Q 014222 264 EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKD---------GCKIRVYDEVTDSWS 334 (428)
Q Consensus 264 ~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~---------~~~i~~yd~~~~~W~ 334 (428)
+|+..+++... ..+..+|+.+++-..+...........+..-+|+..++++.+ ...+++||.++.+..
T Consensus 389 DG~~la~~~~~---~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~ 465 (1045)
T 1k32_A 389 NGKFAVVANDR---FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF 465 (1045)
T ss_dssp TSSEEEEEETT---SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE
T ss_pred CCCEEEEECCC---CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEE
Confidence 66655555432 257899999887666542111111111223366655554432 247999999987755
Q ss_pred eCc
Q 014222 335 KHI 337 (428)
Q Consensus 335 ~v~ 337 (428)
.+.
T Consensus 466 ~l~ 468 (1045)
T 1k32_A 466 AAT 468 (1045)
T ss_dssp ECS
T ss_pred Eee
Confidence 543
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=87.27 E-value=5.7 Score=37.76 Aligned_cols=135 Identities=16% Similarity=0.106 Sum_probs=70.4
Q ss_pred CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECC-EEEEEecCCCC-ceeEEEEeCCCCCeE-
Q 014222 215 NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEG-KWFLKGLGSHR-QVLSEAYQPETDSWF- 291 (428)
Q Consensus 215 ~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g-~lyv~Gg~~~~-~~~i~~yd~~~~~W~- 291 (428)
++.||+.-.. ..+.++|+.+++.+.+... .......++.-+| .||+....... ...+..++.. ..|.
T Consensus 149 ~g~Lyv~d~~--------~~I~~id~~~~~v~~~~~~-~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~ 218 (430)
T 3tc9_A 149 HNHLYLVGEQ--------HPTRLIDFEKEYVSTVYSG-LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKV 218 (430)
T ss_dssp EEEEEEEEBT--------EEEEEEETTTTEEEEEECC-CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCS
T ss_pred CCeEEEEeCC--------CcEEEEECCCCEEEEEecC-CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceee
Confidence 4789987321 5789999999887776441 1111111222244 49998643222 2235566653 3333
Q ss_pred --ecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCe-EEEEeC
Q 014222 292 --PVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGK-LCIIRN 366 (428)
Q Consensus 292 --~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~-lyv~GG 366 (428)
.+.. ...-...++. ++.||+..... ..|++||+++..-..+...+.. ..+ .+.++..+++ ||+.-.
T Consensus 219 ~~~l~~---~~~p~giavdp~~g~lyv~d~~~-~~V~~~~~~~~~~~~~~~~~~~-~~P----~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 219 ITELTK---GQNCNGAETHPINGELYFNSWNA-GQVFRYDFTTQETTPLFTIQDS-GWE----FHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp EEEEEE---CSSCCCEEECTTTCCEEEEETTT-TEEEEEETTTTEEEEEEECSSS-SCC----EEEEECTTSSEEEEEET
T ss_pred eeeecc---CCCceEEEEeCCCCEEEEEECCC-CEEEEEECCCCcEEEEEEcCCC-Ccc----eeEEEcCCCCEEEEEEC
Confidence 2221 1111223332 68899987543 4899999987765333322211 112 1233333444 999854
Q ss_pred CC
Q 014222 367 NM 368 (428)
Q Consensus 367 ~~ 368 (428)
..
T Consensus 290 ~~ 291 (430)
T 3tc9_A 290 NQ 291 (430)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 275
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=86.84 E-value=28 Score=35.13 Aligned_cols=186 Identities=10% Similarity=0.026 Sum_probs=98.9
Q ss_pred CceEEEEECCCCceeeCCCCCcCCcceeeEEECCE-EEEEccccCC------CCCCCCeEEEEeCCCCce--EEcCCCCC
Q 014222 183 MRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNC-LYVAGGENGG------VHRSLRSAEVYDPNKNRW--SFISDMST 253 (428)
Q Consensus 183 ~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~-iyv~GG~~~~------~~~~~~~v~~yd~~t~~W--~~~~~~p~ 253 (428)
...++++|..|++.... ..+..+....+-. +++ ||.. ..... .......++.++..+..= ..+-..+.
T Consensus 154 ~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~-~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~ 230 (693)
T 3iuj_A 154 WREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYS-SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIP 230 (693)
T ss_dssp EEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEE-ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSG
T ss_pred eEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEE-EecCcccccccccCCCcEEEEEECCCCcccceEEEecCC
Confidence 45899999999987554 1111111222223 554 4443 32211 012345688888877643 12222221
Q ss_pred --CccceE-EEEECCEEEEEe-cCCCCceeEEEEeCCCC--CeEecCCCCcCCCCCceEEECCeEEEEEccCC--cEEEE
Q 014222 254 --AMVPFI-GVVYEGKWFLKG-LGSHRQVLSEAYQPETD--SWFPVYDGMVAGWRNPSASLNRHLYALDCKDG--CKIRV 325 (428)
Q Consensus 254 --~~~~~~-~~~~~g~lyv~G-g~~~~~~~i~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~--~~i~~ 325 (428)
...... ...-+|+..++. ........++.+|..+. .|..+..... .........++.||+....+. ..|+.
T Consensus 231 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~l~~~t~~~~~~~~l~~ 309 (693)
T 3iuj_A 231 AQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD-ADVSLVDNKGSTLYLLTNRDAPNRRLVT 309 (693)
T ss_dssp GGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS-SCEEEEEEETTEEEEEECTTCTTCEEEE
T ss_pred CCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC-ceEEEEeccCCEEEEEECCCCCCCEEEE
Confidence 111112 223366644342 22222345788898765 6877754221 111122345788999875432 57999
Q ss_pred EeCCCC---ceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 326 YDEVTD---SWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 326 yd~~~~---~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+|.++. .|+.+.. ..... ......++.|++.........+.++|..+
T Consensus 310 ~d~~~~~~~~~~~l~~---~~~~~-----~~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 310 VDAANPGPAHWRDLIP---ERQQV-----LTVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EETTSCCGGGCEEEEC---CCSSC-----EEEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred EeCCCCCccccEEEec---CCCCE-----EEEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 998764 4776532 11111 14555677777766555666788998876
No 276
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=86.31 E-value=24 Score=33.72 Aligned_cols=143 Identities=10% Similarity=0.036 Sum_probs=75.0
Q ss_pred EEEEEeCCEEEEEeeeCCCCCCCceEEEEECC---------CCceeeCCCCCcCCcceeeEE---ECCEEEEEccccCCC
Q 014222 161 GCAVLSGCHLYLFGGKDPLKGSMRRVIFYSAR---------TNKWHRAPDMLRRRHFFGSCV---INNCLYVAGGENGGV 228 (428)
Q Consensus 161 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~---------t~~W~~~~~~~~~r~~~~~~~---~~~~iyv~GG~~~~~ 228 (428)
+++...| ++|+|-|. .+|+++.. +..|..+|. ...++. .++++|++-|
T Consensus 267 Ai~~~~g-e~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~Wp~LP~------~iDAa~~~~~~g~~~fFKg----- 326 (450)
T 1su3_A 267 AITTIRG-EVMFFKDR--------FYMRTNPFYPEVELNFISVFWPQLPN------GLEAAYEFADRDEVRFFKG----- 326 (450)
T ss_dssp EEEEETT-EEEEEETT--------EEEECCTTSSSCEEEEGGGTCTTSCS------SCCEEEEEGGGTEEEEEET-----
T ss_pred eEEecCC-eEEEEeCC--------EEEEEcCCCCcccceehhHhccCCCC------CeeEEEEEcCCCeEEEEeC-----
Confidence 3445566 89999653 35555543 334444432 122332 2689999866
Q ss_pred CCCCCeEEEEeCCCCc--e-EEcC---CCCCCccce-EEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeE-----ecC
Q 014222 229 HRSLRSAEVYDPNKNR--W-SFIS---DMSTAMVPF-IGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWF-----PVY 294 (428)
Q Consensus 229 ~~~~~~v~~yd~~t~~--W-~~~~---~~p~~~~~~-~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~-----~~~ 294 (428)
+.+++|+..+-. + ..+. .+|...... ++... ++++|+|-|. ..++||..+++-. .+.
T Consensus 327 ----~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~-----~yw~yd~~~~~~~~gYPk~I~ 397 (450)
T 1su3_A 327 ----NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVAN-----KYWRYDEYKRSMDPGYPKMIA 397 (450)
T ss_dssp ----TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETT-----EEEEEETTTTEECSSCSEEHH
T ss_pred ----CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCC-----EEEEEeCCCccccCCCCcchh
Confidence 356777643210 0 0111 122211112 23333 6899999653 3688987654321 111
Q ss_pred C-CCcCC-CCCceEEECCeEEEEEccCCcEEEEEeCCCCceee
Q 014222 295 D-GMVAG-WRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWSK 335 (428)
Q Consensus 295 ~-~~~~~-~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~ 335 (428)
. .+... .-.++...++++|++-| +..|+||..+++=..
T Consensus 398 ~~fpgip~~iDAA~~~~g~~YFFkg---~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 398 HDFPGIGHKVDAVFMKDGFFYFFHG---TRQYKFDPKTKRILT 437 (450)
T ss_dssp HHSTTSCSCCSEEEEETTEEEEEET---TEEEEEETTTTEEEE
T ss_pred hcCCCCCCCccEEEEcCCeEEEEeC---CEEEEEECCcceEec
Confidence 0 01111 11234456899999976 578999988776443
No 277
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=85.35 E-value=24 Score=32.90 Aligned_cols=75 Identities=13% Similarity=0.098 Sum_probs=40.6
Q ss_pred cceEEEEeeC----C--CCceeEEEEeCCCCceEeCCCCCC-C--CccccccEEEEE-eCCEEEEEeeeCCCCCCCceEE
Q 014222 118 EEWIYVIKRD----R--EGKISWHAFDPIYQLWQPLPPIPK-E--YSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVI 187 (428)
Q Consensus 118 ~~~l~v~gg~----~--~~~~~~~~yd~~~~~W~~l~~~~~-~--~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~ 187 (428)
...+|+.... . ...+.+.++|+.+.+-..--+.+. . .....-+.+++. +|..+|+.... ..+.+.
T Consensus 89 G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-----~~~~Vs 163 (386)
T 3sjl_D 89 GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-----PAPAVG 163 (386)
T ss_dssp SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-----SSCEEE
T ss_pred CCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-----CCCeEE
Confidence 5678887521 0 123468999999987432111111 0 000122344443 55578887321 245799
Q ss_pred EEECCCCcee
Q 014222 188 FYSARTNKWH 197 (428)
Q Consensus 188 ~yd~~t~~W~ 197 (428)
+.|..+++-.
T Consensus 164 VID~~t~~vv 173 (386)
T 3sjl_D 164 VVDLEGKAFK 173 (386)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCcEE
Confidence 9999988643
No 278
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=85.24 E-value=23 Score=32.71 Aligned_cols=195 Identities=11% Similarity=0.064 Sum_probs=103.6
Q ss_pred cceEEEEeeCCCCceeEEEEeCCC--CceEeCCCCCCCCccccccEEEEEe--CCEEEEEeeeCCCCCCCceEEEEECCC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIY--QLWQPLPPIPKEYSEALGFGCAVLS--GCHLYLFGGKDPLKGSMRRVIFYSART 193 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~--~~W~~l~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t 193 (428)
++.||+.. .. -++.++... .+|..+.+.... ...+++++.. .+.||+.+.. +. .-..+++.+-..
T Consensus 22 ~g~l~vgt-~~----Gl~~~~~~~~g~~W~~~~~~~~~---~~v~~i~~dp~~~~~l~~g~~~-g~--~g~gl~~s~D~G 90 (394)
T 3b7f_A 22 PVMLLVAT-IK----GAWFLASDPARRTWELRGPVFLG---HTIHHIVQDPREPERMLMAART-GH--LGPTVFRSDDGG 90 (394)
T ss_dssp CCEEEEEE-TT----EEEEEEECTTSCSEEEEEEESTT---SEEEEEEECSSSTTCEEEEEEC-----CCEEEEEESSTT
T ss_pred CCEEEEEe-cC----ceEEEECCCCCCCceECCccCCC---CceEEEEECCCCCCeEEEEecC-CC--CCccEEEeCCCC
Confidence 34566654 21 366777654 689876321111 2234454442 3368876532 11 112577777777
Q ss_pred CceeeCCCC---CcC--C-------cceeeEEE----CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCC---CC-
Q 014222 194 NKWHRAPDM---LRR--R-------HFFGSCVI----NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDM---ST- 253 (428)
Q Consensus 194 ~~W~~~~~~---~~~--r-------~~~~~~~~----~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~---p~- 253 (428)
.+|+.+... +.. + .-.++++. .+.||+.+.. ..+++.+-...+|+.+... |.
T Consensus 91 ~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~--------ggl~~S~DgG~tW~~~~~~~~~p~~ 162 (394)
T 3b7f_A 91 GNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSP--------QGLFRSTDHGASWEPVAGFNDHPMR 162 (394)
T ss_dssp SCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEET--------TEEEEESSTTSBCEECHHHHTCTTH
T ss_pred CCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecC--------CcEEEEcCCCCCeEECcCccCCccc
Confidence 899987532 111 1 11123332 4677775421 3678888788899987532 21
Q ss_pred -------------CccceEEEEE---CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCC----------CCCceEE
Q 014222 254 -------------AMVPFIGVVY---EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAG----------WRNPSAS 307 (428)
Q Consensus 254 -------------~~~~~~~~~~---~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~----------~~~~~~~ 307 (428)
....+.++.- .+.||+.... ..+++.+-...+|+.+....... .....+.
T Consensus 163 ~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~----ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~ 238 (394)
T 3b7f_A 163 RAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS----GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVV 238 (394)
T ss_dssp HHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET----BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEE
T ss_pred cccccccccCCCCCCceeEEEECCCCCCEEEEEECC----CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEE
Confidence 1111222222 3578876432 12667777778999885422110 1111223
Q ss_pred EC----CeEEEEEccCCcEEEEEeCCCCceeeCcc
Q 014222 308 LN----RHLYALDCKDGCKIRVYDEVTDSWSKHID 338 (428)
Q Consensus 308 ~~----~~lyv~gG~~~~~i~~yd~~~~~W~~v~~ 338 (428)
.+ +.||+.. ...|++++-...+|+.+..
T Consensus 239 ~~~~~~~~l~vg~---~~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 239 QHPAAPDILYQQN---HCGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp ECSSSTTEEEEEE---TTEEEEEETTTTEEECGGG
T ss_pred ECCCCCCEEEEEc---CCeEEEeCCCCCcceECCC
Confidence 22 6677743 2368999988999999864
No 279
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=85.21 E-value=24 Score=32.78 Aligned_cols=147 Identities=14% Similarity=0.063 Sum_probs=73.8
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceE
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWS 246 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~ 246 (428)
.+++.|+.+ ..+.+||..+.+-...-..+..........+ +++.++.|+.+ ..+.+||..+.+..
T Consensus 183 ~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~~~~~ 249 (437)
T 3gre_A 183 SLLVALTNL------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-------GIIDIWDIRFNVLI 249 (437)
T ss_dssp EEEEEEETT------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-------SCEEEEETTTTEEE
T ss_pred CEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-------CeEEEEEcCCccEE
Confidence 677777654 3789999987654322111101111222222 56777777764 57899999886543
Q ss_pred EcCCCCCCccceEEEEE-----CCEEEEEecCCCCceeEEEEeCCCCCeEec-CC---C-------Cc---------CC-
Q 014222 247 FISDMSTAMVPFIGVVY-----EGKWFLKGLGSHRQVLSEAYQPETDSWFPV-YD---G-------MV---------AG- 300 (428)
Q Consensus 247 ~~~~~p~~~~~~~~~~~-----~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~-~~---~-------~~---------~~- 300 (428)
..-..+....-..++.. ++.+.+.|+.+ ..+..||..+.+-... .. . +. ..
T Consensus 250 ~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (437)
T 3gre_A 250 RSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK---TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGI 326 (437)
T ss_dssp EEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT---EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCC
T ss_pred EEEecCCCCceEEEEeccccCCCccEEEEEcCC---CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccc
Confidence 21111111111111111 34445555432 2467888876542111 00 0 00 00
Q ss_pred -C---CCceEEECCeEEEEEccCCcEEEEEeCCCCc
Q 014222 301 -W---RNPSASLNRHLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 301 -~---~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
. -...+..++.+++.|+.++ .|.+||..+.+
T Consensus 327 ~~~~~v~~l~~~~~~~l~s~~~d~-~i~~wd~~~~~ 361 (437)
T 3gre_A 327 RSLNALSTISVSNDKILLTDEATS-SIVMFSLNELS 361 (437)
T ss_dssp CSGGGGCCEEEETTEEEEEEGGGT-EEEEEETTCGG
T ss_pred ccCCceEEEEECCceEEEecCCCC-eEEEEECCCcc
Confidence 0 0112344777888887765 89999987764
No 280
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=85.16 E-value=24 Score=32.74 Aligned_cols=149 Identities=4% Similarity=-0.015 Sum_probs=69.7
Q ss_pred CCEEEEEccccCCCCCCCCeEEEEeCCCC--ceEEcCCCCC----CccceEEEEE--CC-EEEEEecCCCCceeEEEEeC
Q 014222 215 NNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWSFISDMST----AMVPFIGVVY--EG-KWFLKGLGSHRQVLSEAYQP 285 (428)
Q Consensus 215 ~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~----~~~~~~~~~~--~g-~lyv~Gg~~~~~~~i~~yd~ 285 (428)
++++++.| .+ ..+.+||..+. .+..+...+. .......+.+ ++ .+++.|+... .+..||.
T Consensus 188 ~~~~l~s~-~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg---~i~iwd~ 256 (447)
T 3dw8_B 188 DYETYLSA-DD-------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG---TIRLCDM 256 (447)
T ss_dssp TSSEEEEE-CS-------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS---CEEEEET
T ss_pred CCCEEEEe-CC-------CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC---eEEEEEC
Confidence 45566655 32 58899998842 2232211111 1111222223 34 5666665432 4678998
Q ss_pred CCCCe-----EecCCCCcCC---------CCCceEEE--CCeEEEEEccCCcEEEEEeCCC-CceeeCcccccccCCcc-
Q 014222 286 ETDSW-----FPVYDGMVAG---------WRNPSASL--NRHLYALDCKDGCKIRVYDEVT-DSWSKHIDSKMHLGNSR- 347 (428)
Q Consensus 286 ~~~~W-----~~~~~~~~~~---------~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~-~~W~~v~~~~~~~~~~~- 347 (428)
.+.+- ..+....... .....+.+ ++++++.++. ..|.+||..+ ..- +..+........
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~--~~~~~~~~~~~~~ 332 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRP--VETYQVHEYLRSK 332 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSC--SCCEESCGGGTTT
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccc--cceeecccccccc
Confidence 87663 2222111000 01112222 5667666665 5899999875 321 111111100000
Q ss_pred --------c-c-cceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 348 --------A-L-EAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 348 --------~-~-~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
. . ........+++.++.|+.++ .+.+||..+
T Consensus 333 l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg--~v~iwd~~~ 373 (447)
T 3dw8_B 333 LCSLYENDCIFDKFECCWNGSDSVVMTGSYNN--FFRMFDRNT 373 (447)
T ss_dssp HHHHHHTSGGGCCCCEEECTTSSEEEEECSTT--EEEEEETTT
T ss_pred ccccccccccccceEEEECCCCCEEEEeccCC--EEEEEEcCC
Confidence 0 0 00134445667667777654 466788777
No 281
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=84.97 E-value=32 Score=34.00 Aligned_cols=179 Identities=11% Similarity=0.129 Sum_probs=90.7
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCC-C--C---CcCC
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAP-D--M---LRRR 206 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~-~--~---~~~r 206 (428)
.+.+||..+.+... .+... ...-.+++...++++++.|+.++ .+.+||..+++....- . + ....
T Consensus 171 ~v~lwd~~~~~~~~--~l~~H--~~~V~~v~fspdg~~las~s~D~------~i~lwd~~~g~~~~~~~~~~~~~~~h~~ 240 (611)
T 1nr0_A 171 TVAIFEGPPFKFKS--TFGEH--TKFVHSVRYNPDGSLFASTGGDG------TIVLYNGVDGTKTGVFEDDSLKNVAHSG 240 (611)
T ss_dssp CEEEEETTTBEEEE--EECCC--SSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEECBCTTSSSCSSSS
T ss_pred eEEEEECCCCeEee--eeccc--cCceEEEEECCCCCEEEEEECCC------cEEEEECCCCcEeeeeccccccccccCC
Confidence 56677765544322 12211 11223444443436777777653 5888998777643221 1 0 0111
Q ss_pred cceeeEEE-CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCc-cceEEEEECCEEEEEecCCCCceeEEEEe
Q 014222 207 HFFGSCVI-NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAM-VPFIGVVYEGKWFLKGLGSHRQVLSEAYQ 284 (428)
Q Consensus 207 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~-~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd 284 (428)
.-.+++.. +++.++.|+.+ ..+.+||..+.+....-...... .....+..++...+.++.+. .+..||
T Consensus 241 ~V~~v~~spdg~~l~s~s~D-------~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~---~i~~~~ 310 (611)
T 1nr0_A 241 SVFGLTWSPDGTKIASASAD-------KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG---FINFVN 310 (611)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTC---CEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCC-------CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCC---cEEEEe
Confidence 11112222 56777777764 58999999887664322211111 11223334565555554322 356788
Q ss_pred CCCCCeEecCCCCcCCCCCc--eEEE--CCeEEEEEccCCcEEEEEeCCCCceeeC
Q 014222 285 PETDSWFPVYDGMVAGWRNP--SASL--NRHLYALDCKDGCKIRVYDEVTDSWSKH 336 (428)
Q Consensus 285 ~~~~~W~~~~~~~~~~~~~~--~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v 336 (428)
+.+..-.... . ..... ++.+ +++..+.++.++ .|.+||..+..-..+
T Consensus 311 ~~~~~~~~~~---~-gh~~~v~~l~~spdg~~l~s~s~D~-~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 311 PELGSIDQVR---Y-GHNKAITALSSSADGKTLFSADAEG-HINSWDISTGISNRV 361 (611)
T ss_dssp TTTTEEEEEE---C-CCSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTCCEEEC
T ss_pred CCCCCcceEE---c-CCCCCEEEEEEeCCCCEEEEEeCCC-cEEEEECCCCceeee
Confidence 7766422211 1 11111 2222 677777777664 799999988765443
No 282
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=84.93 E-value=11 Score=37.43 Aligned_cols=115 Identities=17% Similarity=0.233 Sum_probs=68.1
Q ss_pred eeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCC--ceEEcCCCCCCc------cceEEEEECCEEEEEecCCCCceeE
Q 014222 209 FGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKN--RWSFISDMSTAM------VPFIGVVYEGKWFLKGLGSHRQVLS 280 (428)
Q Consensus 209 ~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~~------~~~~~~~~~g~lyv~Gg~~~~~~~i 280 (428)
.+.++.+++||+.... ..+.++|..|. .|+.-...+... .....++.+++||+.... ..+
T Consensus 62 ~~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d----g~l 129 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY--------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD----ASV 129 (582)
T ss_dssp CCCEEETTEEEEEETT--------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT----TEE
T ss_pred eccEEECCEEEEEcCC--------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC----CEE
Confidence 3456789999997653 24899998765 587754332210 112345689999986421 247
Q ss_pred EEEeCCCCC--eEecCCCCcCC--CCCceEEECC------eEEEEEcc----CCcEEEEEeCCCCc--eee
Q 014222 281 EAYQPETDS--WFPVYDGMVAG--WRNPSASLNR------HLYALDCK----DGCKIRVYDEVTDS--WSK 335 (428)
Q Consensus 281 ~~yd~~~~~--W~~~~~~~~~~--~~~~~~~~~~------~lyv~gG~----~~~~i~~yd~~~~~--W~~ 335 (428)
+++|.++++ |+.-....... ...+.++.++ .+|+-... ....++.||+++.+ |+.
T Consensus 130 ~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 130 VALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 899998875 88643222111 1223345556 66553210 12479999998764 864
No 283
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=84.58 E-value=25 Score=35.12 Aligned_cols=177 Identities=13% Similarity=0.004 Sum_probs=83.6
Q ss_pred ceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCc-eEEcCCCCCCccceEE
Q 014222 184 RRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNR-WSFISDMSTAMVPFIG 260 (428)
Q Consensus 184 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~~~~~~~ 260 (428)
+++.+.|.....-......+..+...++++. ++.||+.-- ....+.++++.... +..+-.-.. .....+
T Consensus 18 ~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~-------~~~~I~r~~~~g~~~~~~v~~~~~-~~P~Gl 89 (619)
T 3s94_A 18 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV-------SEEAIKRTEFNKTESVQNVVVSGL-LSPDGL 89 (619)
T ss_dssp SBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEET-------TTTEEEEEEC-----CEEEECSSC-SCEEEE
T ss_pred ccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEEC-------CCCeEEEEEccCCCceEEEEeCCC-CCcCeE
Confidence 4566666654321111111112222334433 689999732 23578888887653 332221111 112223
Q ss_pred EE--ECCEEEEEecCCCCceeEEEEeCCCCCeEecC-CCCcCCCCCceEE--ECCeEEEEEccCCcEEEEEeCCCCceee
Q 014222 261 VV--YEGKWFLKGLGSHRQVLSEAYQPETDSWFPVY-DGMVAGWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSK 335 (428)
Q Consensus 261 ~~--~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~-~~~~~~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~ 335 (428)
++ .+++||+.... ...|+++|+....=+.+. ...... ...++ .+|.||+..-.....|++.+++...-..
T Consensus 90 AvD~~~~~ly~~d~~---~~~I~v~~~dG~~~~~l~~~~l~~P--~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~ 164 (619)
T 3s94_A 90 ACDWLGEKLYWTDSE---TNRIEVSNLDGSLRKVLFWQELDQP--RAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 164 (619)
T ss_dssp EEETTTTEEEEEETT---TTEEEEEETTSCSCEEEECSSCSCC--CCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred EEEecCCEEEEEeCC---CCEEEEEECCCCCEEEEEeCCCCCC--ceEEEecCCCeEEEeccCCCCEEEEEECCCCceEE
Confidence 33 37899998532 335788888654332332 111111 12333 3689999984334589999988765444
Q ss_pred CcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 336 HIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 336 v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+.... ...+ .+.++-..+++||+.-... ..|+++|.+.
T Consensus 165 l~~~~--~~~P---~Glald~~~~~LY~aD~~~--~~I~~~~~dG 202 (619)
T 3s94_A 165 IINSE--IYWP---NGLTLDYEEQKLYWADAKL--NFIHKSNLDG 202 (619)
T ss_dssp EECSS--CSSE---EEEEEETTTTEEEEEETTT--CCEEEESSSC
T ss_pred EEeCC--CCCC---cEEEEEccCCEEEEEeCCC--CeEEEecCCC
Confidence 43211 1112 1122222368999985432 2355555544
No 284
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=84.43 E-value=32 Score=34.51 Aligned_cols=68 Identities=6% Similarity=-0.145 Sum_probs=34.7
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCC---CCCceEEEEECCCCceeeCCC
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLK---GSMRRVIFYSARTNKWHRAPD 201 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~---~~~~~v~~yd~~t~~W~~~~~ 201 (428)
.+..+|+.+++-..+....... .....+++...+++.++++..+... .....++++|..+++-+.+..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~-~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 108 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIE-SLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP 108 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTT-TTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC
T ss_pred CEEEEECCCCcEEEEecccccc-ccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccC
Confidence 6778888877654432211100 0012334443333455554432211 123689999999887665543
No 285
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=83.91 E-value=19 Score=30.66 Aligned_cols=63 Identities=6% Similarity=-0.047 Sum_probs=37.3
Q ss_pred CCeEEEEEccCCcEEEEEeCCCCceeeCcccccc--cCCc----ccccceEEEE--eCCeEEEEeCCCeEEEEEeecCC
Q 014222 309 NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMH--LGNS----RALEAAALVP--LNGKLCIIRNNMSISLVDVSKSN 379 (428)
Q Consensus 309 ~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~--~~~~----~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~ 379 (428)
++++|++-| +..|+||..+++...-+. +.. .+.. ....--+++. .++++|++-|. ..+.||..
T Consensus 127 ~gk~yfFkG---~~yw~~d~~~~~~~~gPk-~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~----~ywr~d~~ 197 (225)
T 3oyo_A 127 GKEVYLFKG---NKYVRIAYDSKQLVGNIR-NIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ----NYVRIDFT 197 (225)
T ss_dssp TTEEEEEET---TEEEEEETTTTEEEEEEE-EHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT----EEEEEECC
T ss_pred CCcEEEEeC---CeEEEEECCCCeecCCCc-chhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC----EEEEEeCC
Confidence 689999986 579999987765543110 000 0000 0001133444 47999999885 36789987
No 286
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=83.66 E-value=21 Score=33.07 Aligned_cols=66 Identities=14% Similarity=0.091 Sum_probs=34.6
Q ss_pred eEEEEEccCCcEEEEEeCCCCceee--CcccccccCC--c------ccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 311 HLYALDCKDGCKIRVYDEVTDSWSK--HIDSKMHLGN--S------RALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 311 ~lyv~gG~~~~~i~~yd~~~~~W~~--v~~~~~~~~~--~------~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.+++.|+.++ .|.+||..+..-.. +..+...... . ...........++++++.|+. ..+.+||..+
T Consensus 240 ~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---~~v~iwd~~~ 315 (447)
T 3dw8_B 240 NTFVYSSSKG-TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY---LSVKVWDLNM 315 (447)
T ss_dssp TEEEEEETTS-CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES---SEEEEEETTC
T ss_pred cEEEEEeCCC-eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC---CeEEEEeCCC
Confidence 6778887664 89999988766311 1111111000 0 000112333446777777765 4577888764
No 287
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=83.06 E-value=12 Score=31.97 Aligned_cols=60 Identities=7% Similarity=-0.116 Sum_probs=35.9
Q ss_pred CCEEEEEecCCCCceeEEEEeCCCCCeEe-----cCC-CCcCC-----CCCceEE---ECCeEEEEEccCCcEEEEEeCC
Q 014222 264 EGKWFLKGLGSHRQVLSEAYQPETDSWFP-----VYD-GMVAG-----WRNPSAS---LNRHLYALDCKDGCKIRVYDEV 329 (428)
Q Consensus 264 ~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~-----~~~-~~~~~-----~~~~~~~---~~~~lyv~gG~~~~~i~~yd~~ 329 (428)
++++|++-|. ..++||..+++-.. +.. .+... ...-+|. .++++|++-| +..|.||..
T Consensus 129 ~~k~yfFkG~-----~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg---~~Ywr~d~~ 200 (227)
T 3lp9_A 129 GKEVYLFKGD-----QYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD---DHYARVKVT 200 (227)
T ss_dssp TTEEEEEETT-----EEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET---TEEEEEECC
T ss_pred CCEEEEEECC-----EEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC---CEEEEEECC
Confidence 6899999663 36889876553211 110 11100 1122343 3589999986 579999988
Q ss_pred CC
Q 014222 330 TD 331 (428)
Q Consensus 330 ~~ 331 (428)
++
T Consensus 201 ~~ 202 (227)
T 3lp9_A 201 PX 202 (227)
T ss_dssp SS
T ss_pred cc
Confidence 76
No 288
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=82.69 E-value=30 Score=31.96 Aligned_cols=201 Identities=11% Similarity=0.042 Sum_probs=103.3
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCC---CCCCcc------ccccEEEEE--e-CCEEEEEeeeCCCCCCCce
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPI---PKEYSE------ALGFGCAVL--S-GCHLYLFGGKDPLKGSMRR 185 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~---~~~~~~------r~~~~~~~~--~-~~~lyv~GG~~~~~~~~~~ 185 (428)
.+.||+.+..+.....++..+....+|..+... +..... ..-.++++. + .+.||+.+. ...
T Consensus 67 ~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~gg 139 (394)
T 3b7f_A 67 PERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQG 139 (394)
T ss_dssp TTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTE
T ss_pred CCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-------CCc
Confidence 467787764322223577788888899988632 111000 011233333 1 336776542 125
Q ss_pred EEEEECCCCceeeCCCC---Cc--------------CCcceeeEEE---CCEEEEEccccCCCCCCCCeEEEEeCCCCce
Q 014222 186 VIFYSARTNKWHRAPDM---LR--------------RRHFFGSCVI---NNCLYVAGGENGGVHRSLRSAEVYDPNKNRW 245 (428)
Q Consensus 186 v~~yd~~t~~W~~~~~~---~~--------------~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W 245 (428)
+++.+-...+|+.+... |. ....+.+++. .+.||+.... ..+++.+-...+|
T Consensus 140 l~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~--------ggl~~s~DgG~tW 211 (394)
T 3b7f_A 140 LFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS--------GGVFESTDAGTDW 211 (394)
T ss_dssp EEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET--------BEEEEESSTTSSC
T ss_pred EEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC--------CCEEEECCCCCCc
Confidence 78887778899987432 11 0111233332 2567775432 2467777778899
Q ss_pred EEcCCC------CCC-----ccceEEEEE-C--CEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCC--CCCceEEE-
Q 014222 246 SFISDM------STA-----MVPFIGVVY-E--GKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAG--WRNPSASL- 308 (428)
Q Consensus 246 ~~~~~~------p~~-----~~~~~~~~~-~--g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~--~~~~~~~~- 308 (428)
+.+... |.. ...+.++.. + +.||+... ..+++.+-...+|+.+....+.. ........
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~-----~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~ 286 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH-----CGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVH 286 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET-----TEEEEEETTTTEEECGGGGSCTTTCSCEEEEEEC
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC-----CeEEEeCCCCCcceECCCCCCCCCccceEEEEEC
Confidence 987531 111 112223322 2 67887532 13678888888999986422221 11112222
Q ss_pred ---CCeEEEEEcc----------C-CcEEEEEeCCCCceeeCcc
Q 014222 309 ---NRHLYALDCK----------D-GCKIRVYDEVTDSWSKHID 338 (428)
Q Consensus 309 ---~~~lyv~gG~----------~-~~~i~~yd~~~~~W~~v~~ 338 (428)
.+.||+.... . ...++.-.-...+|+.+..
T Consensus 287 p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~ 330 (394)
T 3b7f_A 287 QRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDR 330 (394)
T ss_dssp SSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECB
T ss_pred CCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCC
Confidence 4678886411 1 1234433333468998763
No 289
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=82.54 E-value=26 Score=32.28 Aligned_cols=188 Identities=13% Similarity=0.057 Sum_probs=87.8
Q ss_pred eeEEEEeCCC--CceEeCCCCCC--CCccccccEEEEEe---C-CEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCC-
Q 014222 132 ISWHAFDPIY--QLWQPLPPIPK--EYSEALGFGCAVLS---G-CHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDM- 202 (428)
Q Consensus 132 ~~~~~yd~~~--~~W~~l~~~~~--~~~~r~~~~~~~~~---~-~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~- 202 (428)
..++.||+.+ .+-..+..... ....-.-|++.+.. + ..|||+--.. ......++.+++.++....+...
T Consensus 83 G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~--~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 83 GKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG--SSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp CEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST--TCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC--CCCeEEEEEEECCCCEEEEEeccc
Confidence 3688888873 34444432211 00112345666543 2 1577774321 12345677788877765544332
Q ss_pred --CcCCcceeeEEECCEEEEEccccCC----------CCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CC-EE
Q 014222 203 --LRRRHFFGSCVINNCLYVAGGENGG----------VHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EG-KW 267 (428)
Q Consensus 203 --~~~r~~~~~~~~~~~iyv~GG~~~~----------~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g-~l 267 (428)
+..+..-.++.-+|.+|+-+...-. .......+++||+. +.+.+.. .........+ ++ .+
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~---~l~~pNGia~spDg~~l 235 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAE---GFDFANGINISPDGKYV 235 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEE---EESSEEEEEECTTSSEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeec---CCcccCcceECCCCCEE
Confidence 2233333455567898886432100 01223578899984 3333221 1111222222 44 78
Q ss_pred EEEecCCCCceeEEEEeCCCC-CeEecCCCCcCCCCCceEE-E-CCeEEEEEccCCcEEEEEeCC
Q 014222 268 FLKGLGSHRQVLSEAYQPETD-SWFPVYDGMVAGWRNPSAS-L-NRHLYALDCKDGCKIRVYDEV 329 (428)
Q Consensus 268 yv~Gg~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~~-~-~~~lyv~gG~~~~~i~~yd~~ 329 (428)
|+.-.. ...+++||...+ +.+..........--..++ - +|.||+..+.++..|.+|||+
T Consensus 236 Yvadt~---~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 236 YIAELL---AHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEGG---GTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EEEeCC---CCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 887421 235788887543 3332211100111011333 3 389999654333333444443
No 290
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=81.96 E-value=35 Score=32.23 Aligned_cols=190 Identities=12% Similarity=0.028 Sum_probs=95.5
Q ss_pred ceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee-
Q 014222 119 EWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH- 197 (428)
Q Consensus 119 ~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~- 197 (428)
+.||+.-.. ..+.++|+.+++...+.... ..-.++++..++.||+..-.+. .....+..++.... +.
T Consensus 153 g~Lyv~D~~----~~I~~id~~~g~v~~~~~~~-----~~P~giavd~dG~lyVad~~~~--~~~~gv~~~~~~~~-~~~ 220 (433)
T 4hw6_A 153 DDLYWVGQR----DAFRHVDFVNQYVDIKTTNI-----GQCADVNFTLNGDMVVVDDQSS--DTNTGIYLFTRASG-FTE 220 (433)
T ss_dssp CEEEEECBT----SCEEEEETTTTEEEEECCCC-----SCEEEEEECTTCCEEEEECCSC--TTSEEEEEECGGGT-TCC
T ss_pred CEEEEEeCC----CCEEEEECCCCEEEEeecCC-----CCccEEEECCCCCEEEEcCCCC--cccceEEEEECCCC-eec
Confidence 677877432 57999999888887765411 1234555554336888853221 12234666665322 22
Q ss_pred --eCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCce-EEc-CCCCCCccceEEEE-ECC-EEEE
Q 014222 198 --RAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRW-SFI-SDMSTAMVPFIGVV-YEG-KWFL 269 (428)
Q Consensus 198 --~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W-~~~-~~~p~~~~~~~~~~-~~g-~lyv 269 (428)
.++.+ ..-.++++. ++.||+.-.. ...+.+||+.+.+- +.+ .....+. ...++. -++ .||+
T Consensus 221 ~~~~~~~---~~P~giavd~~~G~lyv~d~~-------~~~V~~~d~~~g~~~~~~~~~~~~~~-~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 221 RLSLCNA---RGAKTCAVHPQNGKIYYTRYH-------HAMISSYDPATGTLTEEEVMMDTKGS-NFHIVWHPTGDWAYI 289 (433)
T ss_dssp EEEEEEC---SSBCCCEECTTTCCEEECBTT-------CSEEEEECTTTCCEEEEEEECSCCSS-CEEEEECTTSSEEEE
T ss_pred ccccccc---CCCCEEEEeCCCCeEEEEECC-------CCEEEEEECCCCeEEEEEeccCCCCC-cccEEEeCCCCEEEE
Confidence 22222 112234443 5788886332 25799999986654 222 1111111 112222 244 5998
Q ss_pred EecCCCCceeEEEEeCC--CCCeE---ecCCC-C----------cCCCCCc--eEE----------ECCeEEEEEccCCc
Q 014222 270 KGLGSHRQVLSEAYQPE--TDSWF---PVYDG-M----------VAGWRNP--SAS----------LNRHLYALDCKDGC 321 (428)
Q Consensus 270 ~Gg~~~~~~~i~~yd~~--~~~W~---~~~~~-~----------~~~~~~~--~~~----------~~~~lyv~gG~~~~ 321 (428)
.-.. ...|.++|.. +.... .+... . ......+ .++ -++.||+....+ .
T Consensus 290 ad~~---~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n-~ 365 (433)
T 4hw6_A 290 IYNG---KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDS-H 365 (433)
T ss_dssp EETT---TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTT-T
T ss_pred EeCC---CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCC-C
Confidence 7432 2346675543 44321 11110 0 0011122 233 356899987543 5
Q ss_pred EEEEEeCCCCceeeC
Q 014222 322 KIRVYDEVTDSWSKH 336 (428)
Q Consensus 322 ~i~~yd~~~~~W~~v 336 (428)
.|.++|++. ....+
T Consensus 366 ~I~~~~~~G-~v~t~ 379 (433)
T 4hw6_A 366 TVRVLTPEG-RVTTY 379 (433)
T ss_dssp EEEEECTTS-EEEEE
T ss_pred EEEEECCCC-CEEEE
Confidence 899999854 44443
No 291
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=81.96 E-value=21 Score=29.67 Aligned_cols=138 Identities=11% Similarity=0.077 Sum_probs=72.1
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCC----------CceeeCCCCCcCCcceeeEE--ECCEEEEEccccCCCC
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSART----------NKWHRAPDMLRRRHFFGSCV--INNCLYVAGGENGGVH 229 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t----------~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~ 229 (428)
++...| ++|++-|. .+|+++... ..|.. +|. ...++. .++++|++-|
T Consensus 11 ~~~~~g-~~~fFkg~--------~~w~~~~~~~~~gyP~~I~~~w~g---lP~---~iDAa~~~~~g~~yfFkg------ 69 (196)
T 3c7x_A 11 VAMLRG-EMFVFKER--------WFWRVRNNQVMDGYPMPIGQFWRG---LPA---SINTAYERKDGKFVFFKG------ 69 (196)
T ss_dssp EEEETT-EEEEEETT--------EEEEEETTEECTTCSEEHHHHSTT---CCS---SCCEEEECTTSCEEEEET------
T ss_pred EEEcCC-EEEEEECC--------EEEEEECCccCCCCceEhhHhccC---CCC---CccEEEEeCCCcEEEecC------
Confidence 344556 89999552 577776431 01222 232 222333 3688999866
Q ss_pred CCCCeEEEEeCCCCce---EEcC----CCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEe-----cCC
Q 014222 230 RSLRSAEVYDPNKNRW---SFIS----DMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFP-----VYD 295 (428)
Q Consensus 230 ~~~~~v~~yd~~t~~W---~~~~----~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~-----~~~ 295 (428)
+..++||..+... ..+. .+|.... -++... ++++|++-|. ..++||..+++-.. +..
T Consensus 70 ---~~yw~~~~~~~~~gyPk~I~~~~~glP~~~I-DAA~~~~~~g~~yfFkG~-----~yw~yd~~~~~v~~gyPk~i~~ 140 (196)
T 3c7x_A 70 ---DKHWVFDEASLEPGYPKHIKELGRGLPTDKI-DAALFWMPNGKTYFFRGN-----KYYRFNEELRAVDSEYPKNIKV 140 (196)
T ss_dssp ---TEEEEEETTEECTTCSEEGGGTCBSCCSSCC-SEEEEETTTTEEEEEETT-----EEEEEETTTTEECTTCSEEGGG
T ss_pred ---CEEEEEeCCcccCCCCeEhhhcCCCCCCCcc-cEEEEEccCCEEEEEECC-----EEEEEeCCcccccCCCCccHHH
Confidence 4678887542111 1222 2332212 223332 6899999653 35789987653211 111
Q ss_pred CCcCCCCCceE-EE-CC-eEEEEEccCCcEEEEEeCCCCc
Q 014222 296 GMVAGWRNPSA-SL-NR-HLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 296 ~~~~~~~~~~~-~~-~~-~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
.+......-+| .. ++ ++|++-| +..|.||..+++
T Consensus 141 ~~gip~~idaAf~~~~~~~~YfFkg---~~y~r~d~~~~~ 177 (196)
T 3c7x_A 141 WEGIPESPRGSFMGSDEVFTYFYKG---NKYWKFNNQKLK 177 (196)
T ss_dssp SBTCCSSCSEEEECTTSSEEEEEET---TEEEEEETTTTE
T ss_pred CCCcCCCcceeEEecCCCEEEEEEC---CEEEEEECCcce
Confidence 11111111233 33 44 8999976 578999998764
No 292
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=81.20 E-value=0.36 Score=48.12 Aligned_cols=35 Identities=20% Similarity=0.406 Sum_probs=31.3
Q ss_pred CCCChHHHHHHhcccc-cCCccchhhhchHhHHhhh
Q 014222 68 LPGLPDDLAIACLIRV-PRVEHCKLRLVCKRWHRLL 102 (428)
Q Consensus 68 ~~~lpddl~~~il~rl-p~~~l~~~~~v~k~W~~l~ 102 (428)
...||||++.+|+.++ |.++..++..|||+|+.+.
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 3469999999999999 8899999999999998873
No 293
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=80.21 E-value=34 Score=30.95 Aligned_cols=64 Identities=13% Similarity=0.092 Sum_probs=37.6
Q ss_pred CCeEEEEEccCCcEEEEEeCCCCceeeCccccc--ccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 309 NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKM--HLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 309 ~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~--~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
++++++.|+.++..|.+||..+.+-. ..+.. .... ........++++++.|+.++ .+.+||...
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~--~~~~~g~h~~~----v~~~~~s~~~~~l~s~s~d~--~v~iw~~~~ 271 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLV--REFRRGLDRAD----VVDMKWSTDGSKLAVVSDKW--TLHVFEIFN 271 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEE--EEEECTTCCSC----EEEEEECTTSCEEEEEETTC--EEEEEESSC
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEE--EEEEcCCCCCc----EEEEEECCCCCEEEEEECCC--EEEEEEccC
Confidence 67888888877633999999875432 22210 1111 12334445678888887664 356677655
No 294
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=80.12 E-value=52 Score=33.02 Aligned_cols=144 Identities=7% Similarity=-0.028 Sum_probs=69.6
Q ss_pred ceEEEEECCCCce---eeCCCCC---cCCcceeeEE--ECCEEEEEccccCCCCCCCCeEEEEe----CCCCceEEcCC-
Q 014222 184 RRVIFYSARTNKW---HRAPDML---RRRHFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYD----PNKNRWSFISD- 250 (428)
Q Consensus 184 ~~v~~yd~~t~~W---~~~~~~~---~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd----~~t~~W~~~~~- 250 (428)
..++++|..+++- ..+.... ........+. -++++++..... ......++.+| +.+.++..+..
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~---~~~~~~l~~~d~~~~~~~g~~~~~~~~ 300 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKR---VQNVSVLSICDFREDWQTWDCPKTQEH 300 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEES---STTEEEEEEEEECSSSSSEECCGGGEE
T ss_pred eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEecc---ccCeEEEEEEcccCCCCCCceEEEEec
Confidence 3788999888752 2332210 0111111222 256766653221 11224688899 77776654431
Q ss_pred ---CCCCccc-----eEEEEECCE-EEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEcc---
Q 014222 251 ---MSTAMVP-----FIGVVYEGK-WFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCK--- 318 (428)
Q Consensus 251 ---~p~~~~~-----~~~~~~~g~-lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~--- 318 (428)
-...... .....-+|+ |++..........++.+|..+.+...+..... ........-++.||+.+..
T Consensus 301 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~-~v~~~~~~d~~~i~~~~~~~~~ 379 (719)
T 1z68_A 301 IEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKW-EAINIFRVTQDSLFYSSNEFEE 379 (719)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSS-CEEEEEEECSSEEEEEESCGGG
T ss_pred ccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCce-EEEEEEEEeCCEEEEEEecCCC
Confidence 1111111 222233554 45443333345568999998887766653211 1111122334456666543
Q ss_pred --CCcEEEEEeCCCC
Q 014222 319 --DGCKIRVYDEVTD 331 (428)
Q Consensus 319 --~~~~i~~yd~~~~ 331 (428)
....+|..+..+.
T Consensus 380 ~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 380 YPGRRNIYRISIGSY 394 (719)
T ss_dssp CTTCBEEEEEECSSS
T ss_pred CCceEEEEEEeCCCC
Confidence 2246777777554
No 295
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=79.35 E-value=18 Score=30.92 Aligned_cols=64 Identities=9% Similarity=0.013 Sum_probs=36.6
Q ss_pred CCeEEEEEccCCcEEEEEeCCCCceee-----Cc-cccccc--CCcccccceEEEE-eCCeEEEEeCCCeEEEEEeecCC
Q 014222 309 NRHLYALDCKDGCKIRVYDEVTDSWSK-----HI-DSKMHL--GNSRALEAAALVP-LNGKLCIIRNNMSISLVDVSKSN 379 (428)
Q Consensus 309 ~~~lyv~gG~~~~~i~~yd~~~~~W~~-----v~-~~~~~~--~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~ 379 (428)
++++|++-| +..|+||..+++-.. +. .+|... +.. ....+++.. .++++|++-|. ..+.||..
T Consensus 129 ~~k~yfFkG---~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p-~~iDAA~~~~~~g~~YfFkg~----~Ywr~d~~ 200 (227)
T 3lp9_A 129 GKEVYLFKG---DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFE-SGADAAFASHKTNEVYFFKDD----HYARVKVT 200 (227)
T ss_dssp TTEEEEEET---TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGG-GCCSEEEECSSTTEEEEEETT----EEEEEECC
T ss_pred CCEEEEEEC---CEEEEEeCCCccccCCCCeEHHHCCCCccccccC-CCccEEEEcCCCceEEEEECC----EEEEEECC
Confidence 689999986 579999987654221 10 111000 000 001233322 46899999885 35779987
Q ss_pred C
Q 014222 380 G 380 (428)
Q Consensus 380 ~ 380 (428)
+
T Consensus 201 ~ 201 (227)
T 3lp9_A 201 P 201 (227)
T ss_dssp S
T ss_pred c
Confidence 7
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=78.57 E-value=37 Score=30.46 Aligned_cols=185 Identities=11% Similarity=-0.014 Sum_probs=97.4
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCc---eEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECCC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQL---WQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSART 193 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~---W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t 193 (428)
++.||+.-. ....++.+++.... +.....+. .-.++++- .++.||+.-. ....++++++..
T Consensus 46 ~~~lyw~D~---~~~~I~r~~~~g~~~~~~~~~~~l~------~p~glavd~~~g~ly~~d~------~~~~I~~~~~dG 110 (318)
T 3sov_A 46 HGLIYWSDV---SEEAIKRTEFNKTESVQNVVVSGLL------SPDGLACDWLGEKLYWTDS------ETNRIEVSNLDG 110 (318)
T ss_dssp GTEEEEEET---TTTEEEEEETTSSSCCCEEEEECCS------CCCEEEEETTTTEEEEEET------TTTEEEEEETTS
T ss_pred CCEEEEEEC---CCCcEEEEEccCCCceEEEEcCCCC------CccEEEEEcCCCeEEEEEC------CCCEEEEEECCC
Confidence 456666642 22367777776542 11111111 12355554 2338998842 235788999875
Q ss_pred CceeeC--CCCCcCCcceeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEE
Q 014222 194 NKWHRA--PDMLRRRHFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKW 267 (428)
Q Consensus 194 ~~W~~~--~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~l 267 (428)
..-+.+ ..+..|+ +.++ .++.||+.--. ....++++|+....-+.+..-.. ......+.- +++|
T Consensus 111 ~~~~~l~~~~~~~P~---giavdp~~g~ly~td~~------~~~~I~r~~~dG~~~~~~~~~~l-~~Pnglavd~~~~~l 180 (318)
T 3sov_A 111 SLRKVLFWQELDQPR---AIALDPSSGFMYWTDWG------EVPKIERAGMDGSSRFIIINSEI-YWPNGLTLDYEEQKL 180 (318)
T ss_dssp CSCEEEECSSCSSEE---EEEEEGGGTEEEEEECS------SSCEEEEEETTSCSCEEEECSSC-SCEEEEEEETTTTEE
T ss_pred CcEEEEEeCCCCCcc---EEEEeCCCCEEEEEecC------CCCEEEEEEcCCCCeEEEEECCC-CCccEEEEeccCCEE
Confidence 432322 2222222 3344 36899987411 13679999987543222211111 111233332 7899
Q ss_pred EEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCc
Q 014222 268 FLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 268 yv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
|+.-.. ...|+++|+....-+.+.. .....-.+.++.++.||+.... +..|+++|+.+.+
T Consensus 181 Y~aD~~---~~~I~~~d~dG~~~~~~~~-~~~~~P~glav~~~~lywtd~~-~~~V~~~~~~~G~ 240 (318)
T 3sov_A 181 YWADAK---LNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFEDILYWTDWS-THSILACNKYTGE 240 (318)
T ss_dssp EEEETT---TTEEEEEETTSCSCEEEEC-SCCSCEEEEEEETTEEEEEETT-TTEEEEEETTTCC
T ss_pred EEEECC---CCEEEEEcCCCCceEEEec-CCCCCceEEEEeCCEEEEEecC-CCeEEEEECCCCC
Confidence 998432 3458899886543333321 0111112356678999999643 4589999986554
No 297
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=77.09 E-value=42 Score=30.29 Aligned_cols=183 Identities=10% Similarity=-0.004 Sum_probs=83.1
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCcee
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWH 197 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~ 197 (428)
.+.+.+.|+.. ..+.++|..+++-...-..+. .-.++. .....+++.. ...+.+||..+. .+
T Consensus 70 ~~~~~~~~~~d---~~v~iWd~~~~~~~~~~~~~~-----~v~~v~-~~~~~~~~~~--------~~~i~i~d~~~~-~~ 131 (355)
T 3vu4_A 70 TNYVAFVTGVK---EVVHIWDDVKKQDVSRIKVDA-----PVKDLF-LSREFIVVSY--------GDVISVFKFGNP-WK 131 (355)
T ss_dssp SSEEEEECSST---TEEEEEETTTTEEEEEEECSS-----CEEEEE-ECSSEEEEEE--------TTEEEEEESSTT-CC
T ss_pred CCEEEEEECCc---cEEEEEECCCCcEEEEEECCC-----ceEEEE-EcCCEEEEEE--------cCEEEEEECCCC-ce
Confidence 34454555322 278889988876432111111 122233 3332444432 236889998776 11
Q ss_pred eCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCc-eEE-------------cCCCCCCccceEEEEE
Q 014222 198 RAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNR-WSF-------------ISDMSTAMVPFIGVVY 263 (428)
Q Consensus 198 ~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~-W~~-------------~~~~p~~~~~~~~~~~ 263 (428)
.+..+..+ ....+...+.+.+..|..+ ..+.+||..+.. +.. +..+.........+.+
T Consensus 132 ~~~~~~~~--~~~~~~s~~~la~~sg~~~------g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~ 203 (355)
T 3vu4_A 132 RITDDIRF--GGVCEFSNGLLVYSNEFNL------GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRL 203 (355)
T ss_dssp BSSCCEEE--EEEEEEETTEEEEEESSCT------TCEEEEECCC------------------CCEEECCCSSCEEEEEE
T ss_pred eeEEeccC--CceEEEEccEEEEeCCCcC------cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEE
Confidence 22222221 1112222244444323321 478899988753 100 0001111111122222
Q ss_pred --CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCc--eEEE--CCeEEEEEccCCcEEEEEeCCCC
Q 014222 264 --EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNP--SASL--NRHLYALDCKDGCKIRVYDEVTD 331 (428)
Q Consensus 264 --~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~--~~~~--~~~lyv~gG~~~~~i~~yd~~~~ 331 (428)
+|++.+.|+.+.. .+..||..+.+-...- ........ .+.+ ++++++.|+.++ .|.+||..+.
T Consensus 204 s~~g~~l~s~s~d~~--~v~iwd~~~~~~~~~~--~~g~h~~~v~~~~~s~~~~~l~s~s~d~-~v~iw~~~~~ 272 (355)
T 3vu4_A 204 NRKSDMVATCSQDGT--IIRVFKTEDGVLVREF--RRGLDRADVVDMKWSTDGSKLAVVSDKW-TLHVFEIFND 272 (355)
T ss_dssp CTTSSEEEEEETTCS--EEEEEETTTCCEEEEE--ECTTCCSCEEEEEECTTSCEEEEEETTC-EEEEEESSCC
T ss_pred CCCCCEEEEEeCCCC--EEEEEECCCCcEEEEE--EcCCCCCcEEEEEECCCCCEEEEEECCC-EEEEEEccCC
Confidence 6776666664321 1678898776532211 10001111 2222 677777777664 8999998654
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=76.44 E-value=47 Score=31.35 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=57.2
Q ss_pred CEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEECCEEEEEecCC-CCceeEEEEeCCCCCeE---
Q 014222 216 NCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGS-HRQVLSEAYQPETDSWF--- 291 (428)
Q Consensus 216 ~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~-~~~~~i~~yd~~~~~W~--- 291 (428)
+.||+.-. . ..+.++|+.+.+.+.+... .......++.-+|.||+..... .....+..++... .|.
T Consensus 153 g~Lyv~D~-----~---~~I~~id~~~g~v~~~~~~-~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~-~~~~~~ 222 (433)
T 4hw6_A 153 DDLYWVGQ-----R---DAFRHVDFVNQYVDIKTTN-IGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS-GFTERL 222 (433)
T ss_dssp CEEEEECB-----T---SCEEEEETTTTEEEEECCC-CSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG-TTCCEE
T ss_pred CEEEEEeC-----C---CCEEEEECCCCEEEEeecC-CCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC-Ceeccc
Confidence 89999732 1 6899999988887776541 1111122222366799885322 1122355565532 232
Q ss_pred ecCCCCcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCce
Q 014222 292 PVYDGMVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSW 333 (428)
Q Consensus 292 ~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W 333 (428)
.++. ...-...++- ++.||+....+ ..|++||+++.+-
T Consensus 223 ~~~~---~~~P~giavd~~~G~lyv~d~~~-~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 223 SLCN---ARGAKTCAVHPQNGKIYYTRYHH-AMISSYDPATGTL 262 (433)
T ss_dssp EEEE---CSSBCCCEECTTTCCEEECBTTC-SEEEEECTTTCCE
T ss_pred cccc---cCCCCEEEEeCCCCeEEEEECCC-CEEEEEECCCCeE
Confidence 1111 1111123332 68899887543 4899999986654
No 299
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=76.42 E-value=43 Score=30.09 Aligned_cols=128 Identities=10% Similarity=-0.018 Sum_probs=63.5
Q ss_pred cEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCC-c---C-CcceeeEEE-CCEEEEEccccCCCCCCCC
Q 014222 160 FGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDML-R---R-RHFFGSCVI-NNCLYVAGGENGGVHRSLR 233 (428)
Q Consensus 160 ~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~-~---~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 233 (428)
.++++..++++|+........ . ..++.++ +.+-...+... . . ..-+++++- +++||++..... .....
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~-~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~--~~~~~ 93 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQP-E-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ--SKSVP 93 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCC-S-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH--HTSCC
T ss_pred ceEEECCCCCEEEEeCCCCCC-c-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC--cCCCC
Confidence 355665333798875321111 1 4677777 44444333210 1 1 112233333 489999852210 01125
Q ss_pred eEEEEeCCCCceEEcCCCC-----CCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCC-eEec
Q 014222 234 SAEVYDPNKNRWSFISDMS-----TAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDS-WFPV 293 (428)
Q Consensus 234 ~v~~yd~~t~~W~~~~~~p-----~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~-W~~~ 293 (428)
.+.+||+.+++-...-.++ .......+++- ++.+|+..........+.+||+.+++ |..+
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 7999999988733211121 11112334443 57899974311123457899998664 5544
No 300
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=76.04 E-value=48 Score=30.45 Aligned_cols=67 Identities=4% Similarity=-0.123 Sum_probs=36.8
Q ss_pred CCEEEEEecCC------CCceeEEEEeCCCCCe-EecCCCCcCCCCCce-EEECCe-EEEEEccCCcEEEEEeCCCCce
Q 014222 264 EGKWFLKGLGS------HRQVLSEAYQPETDSW-FPVYDGMVAGWRNPS-ASLNRH-LYALDCKDGCKIRVYDEVTDSW 333 (428)
Q Consensus 264 ~g~lyv~Gg~~------~~~~~i~~yd~~~~~W-~~~~~~~~~~~~~~~-~~~~~~-lyv~gG~~~~~i~~yd~~~~~W 333 (428)
++++|+..... .....+.++|..+.+= ..++ ....-.+. ..-+++ ++++.....+.|.+||.++.+=
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~---~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS---LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE---CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 46889874311 1224588999987754 2332 11111222 233555 4444443346899999987543
No 301
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=74.59 E-value=38 Score=28.63 Aligned_cols=136 Identities=14% Similarity=0.070 Sum_probs=69.7
Q ss_pred ECCEEEEEccccCCCCCCCCeEEEEeCCCCce--EEcC----CCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCC
Q 014222 214 INNCLYVAGGENGGVHRSLRSAEVYDPNKNRW--SFIS----DMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPET 287 (428)
Q Consensus 214 ~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W--~~~~----~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~ 287 (428)
.+|++|++-|. ..++++.....+ ..+. .+|.. --++...+|++|++-|. ..++|+..+
T Consensus 27 ~~g~~yfFkg~---------~~Wr~~~~~~~~~p~~Is~~wpgLP~~--IDAA~~~~~~~yfFkG~-----~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSGS---------HYWRLDTNRDGWHSWPIAHQWPQGPST--VDAAFSWEDKLYLIQDT-----KVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEETT---------EEEESSSSSCTTCCEEGGGTCTTSCSS--CSEEEEETTEEEEEETT-----EEEEEECSS
T ss_pred CCCcEEEEeCC---------EEEEEcCCCCCCCceEhhhhccCCCCC--ccEEEEECCcEEEecCC-----EEEEEeCCC
Confidence 47889998663 455555433221 1121 33322 22344459999999653 367887643
Q ss_pred CCeEecCC----------CCcC--CCCCceEE-E--CCeEEEEEccCCcEEEEEeCCCC---ceeeCcccccccCCcccc
Q 014222 288 DSWFPVYD----------GMVA--GWRNPSAS-L--NRHLYALDCKDGCKIRVYDEVTD---SWSKHIDSKMHLGNSRAL 349 (428)
Q Consensus 288 ~~W~~~~~----------~~~~--~~~~~~~~-~--~~~lyv~gG~~~~~i~~yd~~~~---~W~~v~~~~~~~~~~~~~ 349 (428)
+. +.... .+.. ....-+|. . ++++|++-| +..|.||..+. .|...+.++..
T Consensus 91 ~~-~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG---~~ywr~d~~~~P~~i~~~~~g~p~~------- 159 (219)
T 1hxn_A 91 GY-TLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG---RRLWWLDLKSGAQATWTELPWPHEK------- 159 (219)
T ss_dssp SC-EECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET---TEEEEEEGGGGGGCCCEEECCSCSC-------
T ss_pred Cc-eecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC---CEEEEEeCCCCceEhhhcCCCCCCC-------
Confidence 21 11111 1111 00112333 2 689999986 57899997653 23322221111
Q ss_pred cceEEEE-----------eCCeEEEEeCCCeEEEEEeecCCC
Q 014222 350 EAAALVP-----------LNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 350 ~~~~~~~-----------~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
..+++.. .++.+|++-|. ..+.||..+
T Consensus 160 vdAa~~~~~~~~~~~~~~~~~~~YFFkg~----~y~r~~~~~ 197 (219)
T 1hxn_A 160 VDGALCMEKPLGPNSCSTSGPNLYLIHGP----NLYCYRHVD 197 (219)
T ss_dssp CSEEEEESSCSSSCCSCSSSCEEEEEETT----EEEEESSHH
T ss_pred cCEEEEccccccccceeccCCeEEEEECC----EEEEEeCCc
Confidence 1123331 45789999886 356677654
No 302
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=74.25 E-value=54 Score=30.18 Aligned_cols=142 Identities=11% Similarity=0.080 Sum_probs=75.3
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCCC---------ceeeCCCCCcCCcceeeE-EE--CCEEEEEccccCCCC
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTN---------KWHRAPDMLRRRHFFGSC-VI--NNCLYVAGGENGGVH 229 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~---------~W~~~~~~~~~r~~~~~~-~~--~~~iyv~GG~~~~~~ 229 (428)
++...| ++|+|=|. .+|+++.... .|..+| . ...++ .. ++++|++-|
T Consensus 186 v~~~~g-~~~fFkg~--------~~Wr~~~~~~~~~p~~I~~~wpgLP---~---~iDAa~~~~~~g~~~fFkg------ 244 (365)
T 3ba0_A 186 VTTVGN-KIFFFKDR--------FFWLKVSERPKTSVNLISSLWPTLP---S---GIEAAYEIEARNQVFLFKD------ 244 (365)
T ss_dssp EEEETT-EEEEEETT--------EEEECCSSCCCCCEEEHHHHCSSCC---S---SCCEEEEEGGGTEEEEEET------
T ss_pred EEEcCC-eEEEEeCC--------EEEEEcCCCccCCccchhhhccCCC---C---CccEEEEecCCCEEEEEeC------
Confidence 444566 89999542 4666654332 233333 1 22223 22 789999966
Q ss_pred CCCCeEEEEeCCCCc--e-EEcCC--CCCCccc-eEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEe-----cCC-
Q 014222 230 RSLRSAEVYDPNKNR--W-SFISD--MSTAMVP-FIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFP-----VYD- 295 (428)
Q Consensus 230 ~~~~~v~~yd~~t~~--W-~~~~~--~p~~~~~-~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~-----~~~- 295 (428)
+..++|+..+.. + ..+.. +|..... -++... ++++|+|-|. ..++||..+++-.. +..
T Consensus 245 ---~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~-----~yw~yd~~~~~v~~gyPk~I~~~ 316 (365)
T 3ba0_A 245 ---DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN-----QYWRYDERRQMMDPGYPKLITKN 316 (365)
T ss_dssp ---TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT-----EEEEEETTTTEECSSCCCCHHHH
T ss_pred ---CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC-----EEEEEeCCcceecCCCCcchhhc
Confidence 356677653221 1 12322 2332112 233333 5899999653 35889886654221 000
Q ss_pred CCcCCCC-CceEEE-CCeEEEEEccCCcEEEEEeCCCCceee
Q 014222 296 GMVAGWR-NPSASL-NRHLYALDCKDGCKIRVYDEVTDSWSK 335 (428)
Q Consensus 296 ~~~~~~~-~~~~~~-~~~lyv~gG~~~~~i~~yd~~~~~W~~ 335 (428)
.+..... .++... ++++|++-| +..|+||..+++-..
T Consensus 317 f~g~p~~iDaA~~~~~g~~YfFkg---~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 317 FQGIGPKIDAVFYSKNKYYYFFQG---SNQFEYDFLLQRITK 355 (365)
T ss_dssp STTCCSSCSEEEEETTTEEEEEET---TEEEEEETTTTEEEE
T ss_pred CCCCCCccceeeEecCCcEEEEeC---CEEEEEECCccEEec
Confidence 0111111 223344 899999976 579999998876554
No 303
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=74.21 E-value=61 Score=30.81 Aligned_cols=144 Identities=11% Similarity=-0.019 Sum_probs=72.7
Q ss_pred eeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEE--c----CCCCCCccceEEEE--ECCEEEEEecCCCCceeEE
Q 014222 210 GSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSF--I----SDMSTAMVPFIGVV--YEGKWFLKGLGSHRQVLSE 281 (428)
Q Consensus 210 ~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~--~----~~~p~~~~~~~~~~--~~g~lyv~Gg~~~~~~~i~ 281 (428)
+++..+|++|++-|. ..++++.....+.. + +.+|.. --++.. .+|++|+|-|. ..+
T Consensus 267 Ai~~~~ge~y~Fkg~---------~~wr~~~~~~~~~p~~I~~~Wp~LP~~--iDAa~~~~~~g~~~fFKg~-----~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKDR---------FYMRTNPFYPEVELNFISVFWPQLPNG--LEAAYEFADRDEVRFFKGN-----KYW 330 (450)
T ss_dssp EEEEETTEEEEEETT---------EEEECCTTSSSCEEEEGGGTCTTSCSS--CCEEEEEGGGTEEEEEETT-----EEE
T ss_pred eEEecCCeEEEEeCC---------EEEEEcCCCCcccceehhHhccCCCCC--eeEEEEEcCCCeEEEEeCC-----EEE
Confidence 355679999999773 34555443332221 1 123322 112222 27999999653 246
Q ss_pred EEeCCCC--Ce-EecC---CCCcC-CCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceee-----CcccccccCCcc
Q 014222 282 AYQPETD--SW-FPVY---DGMVA-GWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSK-----HIDSKMHLGNSR 347 (428)
Q Consensus 282 ~yd~~~~--~W-~~~~---~~~~~-~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~-----v~~~~~~~~~~~ 347 (428)
.|+..+- .+ ..+. ..|.. ..-.++... ++++|++-| +..|+||..+++-.. +...-+..+.
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG---~~yw~yd~~~~~~~~gYPk~I~~~fpgip~-- 405 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA---NKYWRYDEYKRSMDPGYPKMIAHDFPGIGH-- 405 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET---TEEEEEETTTTEECSSCSEEHHHHSTTSCS--
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC---CEEEEEeCCCccccCCCCcchhhcCCCCCC--
Confidence 6654220 00 1111 01111 111123333 689999976 589999987543221 1100001111
Q ss_pred cccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 348 ALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 348 ~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.--+++..++++|+|-|. ..+.||..+
T Consensus 406 --~iDAA~~~~g~~YFFkg~----~ywr~d~~~ 432 (450)
T 1su3_A 406 --KVDAVFMKDGFFYFFHGT----RQYKFDPKT 432 (450)
T ss_dssp --CCSEEEEETTEEEEEETT----EEEEEETTT
T ss_pred --CccEEEEcCCeEEEEeCC----EEEEEECCc
Confidence 113445578999999876 357788776
No 304
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=74.07 E-value=37 Score=28.15 Aligned_cols=144 Identities=8% Similarity=-0.040 Sum_probs=71.3
Q ss_pred eEEECCEEEEEccccCCCCCCCCeEEEEeCCCCc--e-EEc----CCCCCCccceEEEEECCEEEEEecCCCCceeEEEE
Q 014222 211 SCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNR--W-SFI----SDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAY 283 (428)
Q Consensus 211 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~--W-~~~----~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~y 283 (428)
++..++++|++-| +.+++++...-. . ..+ +.+|.. ..++....+|++|++-|. ..+.|
T Consensus 11 ~~~~~g~~~fFkg---------~~~w~~~~~~~~~gyP~~I~~~w~glP~~-iDAa~~~~~g~~yfFkg~-----~yw~~ 75 (196)
T 3c7x_A 11 VAMLRGEMFVFKE---------RWFWRVRNNQVMDGYPMPIGQFWRGLPAS-INTAYERKDGKFVFFKGD-----KHWVF 75 (196)
T ss_dssp EEEETTEEEEEET---------TEEEEEETTEECTTCSEEHHHHSTTCCSS-CCEEEECTTSCEEEEETT-----EEEEE
T ss_pred EEEcCCEEEEEEC---------CEEEEEECCccCCCCceEhhHhccCCCCC-ccEEEEeCCCcEEEecCC-----EEEEE
Confidence 4467899999976 356666432100 0 111 133431 222222247889999653 35777
Q ss_pred eCCCCCe---EecCCC---CcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceee-----CcccccccCCccccc
Q 014222 284 QPETDSW---FPVYDG---MVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSK-----HIDSKMHLGNSRALE 350 (428)
Q Consensus 284 d~~~~~W---~~~~~~---~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~-----v~~~~~~~~~~~~~~ 350 (428)
|..+... ..+... .+...-.++... ++++|++-| +..|+||..+++-.. +... +..+.. .
T Consensus 76 ~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG---~~yw~yd~~~~~v~~gyPk~i~~~-~gip~~---i 148 (196)
T 3c7x_A 76 DEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG---NKYYRFNEELRAVDSEYPKNIKVW-EGIPES---P 148 (196)
T ss_dssp ETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET---TEEEEEETTTTEECTTCSEEGGGS-BTCCSS---C
T ss_pred eCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC---CEEEEEeCCcccccCCCCccHHHC-CCcCCC---c
Confidence 7532110 112111 111111222332 689999976 578999987754321 1100 011111 1
Q ss_pred ceEEEEeCC-eEEEEeCCCeEEEEEeecCCC
Q 014222 351 AAALVPLNG-KLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 351 ~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.++....++ ++|++-|. ..+.||..+
T Consensus 149 daAf~~~~~~~~YfFkg~----~y~r~d~~~ 175 (196)
T 3c7x_A 149 RGSFMGSDEVFTYFYKGN----KYWKFNNQK 175 (196)
T ss_dssp SEEEECTTSSEEEEEETT----EEEEEETTT
T ss_pred ceeEEecCCCEEEEEECC----EEEEEECCc
Confidence 233333344 99999775 356788776
No 305
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=73.96 E-value=63 Score=30.82 Aligned_cols=137 Identities=10% Similarity=0.081 Sum_probs=76.5
Q ss_pred CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEc--CCCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCC---
Q 014222 215 NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFI--SDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDS--- 289 (428)
Q Consensus 215 ~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~--~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~--- 289 (428)
++++|++-| +..+.||..+++...- +.+|. .-++...+|++|++-|. ..+.||+.+.+
T Consensus 158 ~~~~yfFkG---------~~yw~yd~~~~~~~~~~w~gi~~---iDAA~~~~g~~YfFkG~-----~y~rfd~~~~~v~~ 220 (460)
T 1qhu_A 158 DEGILFFQG---------NRKWFWDLTTGTKKERSWPAVGN---CTSALRWLGRYYCFQGN-----QFLRFNPVSGEVPP 220 (460)
T ss_dssp SSEEEEEET---------TEEEEEETTTTEEEEECCTTSCC---CSEEEEETTEEEEEETT-----EEEEECTTTCCCCT
T ss_pred CCeEEEEec---------ccEEEEecccceeecccCCCCCc---cchheeeCCceEEEECC-----EEEEEcCccCcccC
Confidence 678888876 3678999988765431 22332 24556678999999663 24678875543
Q ss_pred ---------eEecCCCC--------------c-C---CCCCceEE--ECCeEEEEEccCCcEEEEEeCCCCceee--Ccc
Q 014222 290 ---------WFPVYDGM--------------V-A---GWRNPSAS--LNRHLYALDCKDGCKIRVYDEVTDSWSK--HID 338 (428)
Q Consensus 290 ---------W~~~~~~~--------------~-~---~~~~~~~~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~--v~~ 338 (428)
|-.++..- + . ....-++. .+|++|++-| ...|++|...+.+.. |..
T Consensus 221 gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg---~~yWR~~~~~~~~~p~~Is~ 297 (460)
T 1qhu_A 221 GYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG---SHYWRLDTNRDGWHSWPIAH 297 (460)
T ss_dssp TCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET---TEEEECTTGGGCCCCEEGGG
T ss_pred CCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC---CEEEEEecCCCCcCccchhh
Confidence 22211100 0 0 01112333 4689999976 468888876644321 111
Q ss_pred cccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCC
Q 014222 339 SKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSN 379 (428)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~ 379 (428)
.-+..+.. --++...++++|++-|. .+++|+..
T Consensus 298 ~WpglP~~----IDAAf~~~~~~yfFkG~----~yw~f~~~ 330 (460)
T 1qhu_A 298 QWPQGPST----VDAAFSWEDKLYLIQDT----KVYVFLTK 330 (460)
T ss_dssp TCTTSCSS----CSEEEEETTEEEEEETT----EEEEEECS
T ss_pred hccCCCCC----CcEEEEECCeEEEEeCC----EEEEEeCC
Confidence 00111111 13444568999999775 36677754
No 306
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=73.35 E-value=65 Score=30.70 Aligned_cols=75 Identities=5% Similarity=-0.076 Sum_probs=39.5
Q ss_pred ccceEEEEeeCCCCceeEEEEeCCCC----ceEeCCC---CCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEE
Q 014222 117 AEEWIYVIKRDREGKISWHAFDPIYQ----LWQPLPP---IPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFY 189 (428)
Q Consensus 117 ~~~~l~v~gg~~~~~~~~~~yd~~~~----~W~~l~~---~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~y 189 (428)
.+..||+-|. ..+.++++|..++ +-.+.-. +..+.....-|.+....++ |||..--+........+.++
T Consensus 94 ~r~~l~v~~l---~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 94 ERRFLIVPGL---RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CSCEEEEEBT---TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEE
T ss_pred cCCEEEEccC---CCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEE
Confidence 3567777763 3357999998766 2222110 1000001123445555554 77643222122245789999
Q ss_pred ECCCCc
Q 014222 190 SARTNK 195 (428)
Q Consensus 190 d~~t~~ 195 (428)
|+.|.+
T Consensus 170 D~~T~~ 175 (462)
T 2ece_A 170 DHYSFE 175 (462)
T ss_dssp CTTTCC
T ss_pred ECCCCe
Confidence 999876
No 307
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=72.76 E-value=56 Score=29.67 Aligned_cols=232 Identities=11% Similarity=0.052 Sum_probs=109.0
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCC----CccccccEEEEE---eCCEEEEEeeeC------CCC-CCC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKE----YSEALGFGCAVL---SGCHLYLFGGKD------PLK-GSM 183 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~----~~~r~~~~~~~~---~~~~lyv~GG~~------~~~-~~~ 183 (428)
++.+|+-. -....+..+||..+.-..+ .++.. .......++.+. ..+.|+++.-.. +.. ...
T Consensus 24 ~g~~~vs~---l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~ 99 (334)
T 2p9w_A 24 RQVFYQSN---LYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGA 99 (334)
T ss_dssp TTEEEEEE---TTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSC
T ss_pred CCEEEEEe---ccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCC
Confidence 35555543 1123788899986654444 22221 001122456662 233788863210 000 124
Q ss_pred ceEEEEECC---CCc--eee-CCCCCcC-------Ccc-ee-eEE-ECCEEEEEccccCCCCCCCCeEEEEeCCCCc---
Q 014222 184 RRVIFYSAR---TNK--WHR-APDMLRR-------RHF-FG-SCV-INNCLYVAGGENGGVHRSLRSAEVYDPNKNR--- 244 (428)
Q Consensus 184 ~~v~~yd~~---t~~--W~~-~~~~~~~-------r~~-~~-~~~-~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~--- 244 (428)
+.+.+||+. |++ |.. ++..... +.. .. +++ -+|.+||.+... ...++++|+....
T Consensus 100 ~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~------~~~I~rV~pdG~~~~~ 173 (334)
T 2p9w_A 100 SSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG------MPAIARVSADGKTVST 173 (334)
T ss_dssp CEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES------SCEEEEECTTSCCEEE
T ss_pred CEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC------CCeEEEEeCCCCEEee
Confidence 679999988 553 432 2111111 211 22 222 258999987653 1568899987552
Q ss_pred eEEcCCCCCCccce-EEEEE-CC-EEEEEecCCCCceeEEEEeCCCCCeEecCCC---CcCCCCCc-e--E-EECCeEEE
Q 014222 245 WSFISDMSTAMVPF-IGVVY-EG-KWFLKGLGSHRQVLSEAYQPETDSWFPVYDG---MVAGWRNP-S--A-SLNRHLYA 314 (428)
Q Consensus 245 W~~~~~~p~~~~~~-~~~~~-~g-~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~---~~~~~~~~-~--~-~~~~~lyv 314 (428)
|-.-.+....+.+. .++.. +| .|++... . ..+.+||+.+-...+++.. ........ . . -.+|++.+
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~---g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vll 249 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P---RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVL 249 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESS-S---SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEE
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcC-C---CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEE
Confidence 54323223334443 34444 45 5555543 2 2367999874332112110 00011111 1 2 36888855
Q ss_pred EEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEE-E----eCCeEEEEeC
Q 014222 315 LDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALV-P----LNGKLCIIRN 366 (428)
Q Consensus 315 ~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~-~----~~~~lyv~GG 366 (428)
+.-... .++++-...+ |.....+........ -.+.++. . .+++||++.+
T Consensus 250 V~~~~~-~~~~l~S~Dg-W~sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~ 303 (334)
T 2p9w_A 250 VGARAP-YAISFRSWDN-WKSANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSA 303 (334)
T ss_dssp EEEETT-EEEEEECSST-TSEEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEEC
T ss_pred EEcCCC-CEEEEECCCC-cceeEEeeeecCccc-cCceeEEEEeccccCCeEEEEee
Confidence 543222 3455544444 997654321111110 0123322 2 6799999865
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=72.32 E-value=81 Score=31.36 Aligned_cols=181 Identities=13% Similarity=0.061 Sum_probs=98.1
Q ss_pred CEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEE--ECCEEEEEccccCCCCCCCCeEEEEeCCCCce
Q 014222 168 CHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCV--INNCLYVAGGENGGVHRSLRSAEVYDPNKNRW 245 (428)
Q Consensus 168 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W 245 (428)
+.||+.-- ....++++++.....+.+..-... .-.++++ .++.||+.-.. ...+++.++....-
T Consensus 361 ~~ly~sD~------~~~~I~r~~~~g~~~~~v~~~~~~-~p~GlAvD~~~~~lY~tD~~-------~~~I~v~~~~G~~~ 426 (619)
T 3s94_A 361 GYIYWTDD------EVRAIRRSFIDGSGSQFVVTAQIA-HPDGIAVDWVARNLYWTDTG-------TDRIEVTRLNGTMR 426 (619)
T ss_dssp TEEEEEET------TTTEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTTEEEEEETT-------TTEEEEEETTSCSC
T ss_pred CeEEEEeC------CCCeEEEEEcCCCccEEEEECCCC-CcCceEEecccCcEEEEeCC-------CCcEEEEeCCCCeE
Confidence 38998732 245788999877655544321111 1124454 47899997332 36889998876643
Q ss_pred EEcC--CCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCc-eEEE---CCeEEEEEc
Q 014222 246 SFIS--DMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNP-SASL---NRHLYALDC 317 (428)
Q Consensus 246 ~~~~--~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~---~~~lyv~gG 317 (428)
+.+. .+..| ...++- +|.||+..-.. ...|++.++.-..=+.+.. .....+ ..++ +++||+...
T Consensus 427 ~~l~~~~l~~P---~~iavdp~~G~ly~tD~g~--~~~I~r~~~dG~~~~~l~~---~~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 427 KILISEDLEEP---RAIVLDPMVGYMYWTDWGE--IPKIERAALDGSDRVVLVN---TSLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp EEEECTTCCSE---EEEEEETTTTEEEEEECSS--SCEEEEEETTSCSCEEEEC---SSCSCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCCe---eeEEEEcCCCcEEEecCCC--CCEEEEEccCCCccEEEEe---CCCCCCeeeEEcccCCEEEEEEC
Confidence 3332 22222 223333 58999985221 2347788775433222211 111112 2222 689999986
Q ss_pred cCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 318 KDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 318 ~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.. ..|+.+|++...=+.+.. .....+ .+++..++.||+.--. ...|+..|..+
T Consensus 499 ~~-~~I~~~~~dG~~~~~~~~--~~l~~P-----~glav~~~~ly~tD~~--~~~I~~~~k~~ 551 (619)
T 3s94_A 499 KT-DKIEVMNTDGTGRRVLVE--DKIPHI-----FGFTLLGDYVYWTDWQ--RRSIERVHKRS 551 (619)
T ss_dssp TT-TEEEEEESSSCCCEEEEE--CCCCSS-----CCEEEETTEEEEECTT--SSCEEEEESSS
T ss_pred CC-CEEEEEecCCCceEEEec--cCCCCc-----EEEEEECCEEEEeecC--CCeEEEEEcCC
Confidence 54 489999987654333321 111222 4566788999998432 22344444444
No 309
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=71.68 E-value=39 Score=30.61 Aligned_cols=57 Identities=5% Similarity=-0.009 Sum_probs=28.1
Q ss_pred CeEEEEeCC-CCceEEcCCC--CC-Cc-cceEEEEECC-EEEEEecCCCCceeEEEEeCCCCCe
Q 014222 233 RSAEVYDPN-KNRWSFISDM--ST-AM-VPFIGVVYEG-KWFLKGLGSHRQVLSEAYQPETDSW 290 (428)
Q Consensus 233 ~~v~~yd~~-t~~W~~~~~~--p~-~~-~~~~~~~~~g-~lyv~Gg~~~~~~~i~~yd~~~~~W 290 (428)
+.+.+||.. +.+...+... +. .. ..+.+..-+| .+|+.+. ......++.+|..+++.
T Consensus 167 ~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~-~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 167 NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME-AGNRICEYVIDPATHMP 229 (365)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET-TTTEEEEEEECTTTCCE
T ss_pred CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC-CCCeEEEEEEeCCCCcE
Confidence 578999987 6665443221 11 11 1112222255 5676642 22233455566666664
No 310
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=70.69 E-value=90 Score=32.64 Aligned_cols=175 Identities=11% Similarity=-0.036 Sum_probs=84.5
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC 212 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~ 212 (428)
.+.+||..+.+-... .... ..-.+++...| +.++.|+.+ ..+.++|..+.+-... +... ....++
T Consensus 40 ~I~lw~~~~~~~~~~--~~~~---~~V~~l~fspg-~~L~S~s~D------~~v~lWd~~~~~~~~~--~~~~-~~V~~v 104 (902)
T 2oaj_A 40 EVHIYGQQQVEVVIK--LEDR---SAIKEMRFVKG-IYLVVINAK------DTVYVLSLYSQKVLTT--VFVP-GKITSI 104 (902)
T ss_dssp EEEEECSTTCEEEEE--CSSC---CCEEEEEEETT-TEEEEEETT------CEEEEEETTTCSEEEE--EECS-SCEEEE
T ss_pred EEEEEeCCCcEEEEE--cCCC---CCEEEEEEcCC-CEEEEEECc------CeEEEEECCCCcEEEE--EcCC-CCEEEE
Confidence 677788766543221 1111 11233444445 455555433 3688999887653221 1111 111222
Q ss_pred EE--CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcC--------CCCCCcc--ceEEEEE--CCEEEEEecCCCCce
Q 014222 213 VI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFIS--------DMSTAMV--PFIGVVY--EGKWFLKGLGSHRQV 278 (428)
Q Consensus 213 ~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~--------~~p~~~~--~~~~~~~--~g~lyv~Gg~~~~~~ 278 (428)
.+ ++...+.|+.+ ..+.+||..+..-.... ..+..+. -.+++.. ++.+.+.|+.. .
T Consensus 105 ~~sp~g~~l~sgs~d-------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d---g 174 (902)
T 2oaj_A 105 DTDASLDWMLIGLQN-------GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY---V 174 (902)
T ss_dssp ECCTTCSEEEEEETT-------SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS---C
T ss_pred EECCCCCEEEEEcCC-------CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC---C
Confidence 22 45555666543 57899999887542110 0011111 1122333 22455555432 2
Q ss_pred eEEEEeCCCCCeEec-CCC----CcC---------CCCCc--eEEE--CCeEEEEEccCCcEEEEEeCCCCcee
Q 014222 279 LSEAYQPETDSWFPV-YDG----MVA---------GWRNP--SASL--NRHLYALDCKDGCKIRVYDEVTDSWS 334 (428)
Q Consensus 279 ~i~~yd~~~~~W~~~-~~~----~~~---------~~~~~--~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~ 334 (428)
.+ .||..+++-... ... .+. ..... .+.+ ++..++.|+.++ .|.+||..+.+-.
T Consensus 175 ~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg-~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 175 TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN-SLVFWDANSGHMI 246 (902)
T ss_dssp EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC-CEEEEETTTCCEE
T ss_pred cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC-eEEEEECCCCcEE
Confidence 46 889887653321 110 000 00011 2222 677788887665 7999999876543
No 311
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=70.54 E-value=97 Score=31.53 Aligned_cols=141 Identities=7% Similarity=-0.046 Sum_probs=74.4
Q ss_pred CCeEEEEeCCCC--ce--EEcCCCCCCccceEEE-EECCEEEEEecCC-CCceeEEEEeCCC-CCeEe-cCCCCcCCCCC
Q 014222 232 LRSAEVYDPNKN--RW--SFISDMSTAMVPFIGV-VYEGKWFLKGLGS-HRQVLSEAYQPET-DSWFP-VYDGMVAGWRN 303 (428)
Q Consensus 232 ~~~v~~yd~~t~--~W--~~~~~~p~~~~~~~~~-~~~g~lyv~Gg~~-~~~~~i~~yd~~~-~~W~~-~~~~~~~~~~~ 303 (428)
...++.+|..+. .+ +.+.+-.... ..... ..++.||+..-.. .....++.+|..+ ..|+. +-.........
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~~~-~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~ 372 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREKGV-RYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFME 372 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCTTC-CEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEE
T ss_pred CceEEEEECCCCCCCceeEEeecCCCCc-eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEE
Confidence 467888998875 46 5554322111 12222 2377888876443 3445688999876 68876 43211111111
Q ss_pred ceEEECCeEEEEEccCC-cEEEEEeC-------CCCc-eeeCcccccccCCcccccceEEE-----E-eCCeEE-EEeCC
Q 014222 304 PSASLNRHLYALDCKDG-CKIRVYDE-------VTDS-WSKHIDSKMHLGNSRALEAAALV-----P-LNGKLC-IIRNN 367 (428)
Q Consensus 304 ~~~~~~~~lyv~gG~~~-~~i~~yd~-------~~~~-W~~v~~~~~~~~~~~~~~~~~~~-----~-~~~~ly-v~GG~ 367 (428)
.....++.|++....++ ..++++|+ ++.. -..+. ++... ....+. . .++.|+ ...+.
T Consensus 373 ~~~~~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~-l~~~~------~~~~~~~~~~~~~~~~~l~~~~ss~ 445 (751)
T 2xe4_A 373 SIAVRSNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVV-MEEPI------FTVHLVESQMLEYEEPTFRMEYSSL 445 (751)
T ss_dssp EEEECSSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECC-CCCSS------CEEEECGGGCCCTTCSCEEEEEEET
T ss_pred EEEEECCEEEEEEEeCCEEEEEEEecccccccccCCccceEEC-CCCce------eEEEeccCcccCCCCCEEEEEEeCC
Confidence 22345778887765544 46899996 3333 33332 11110 001110 1 223343 44555
Q ss_pred CeEEEEEeecCCC
Q 014222 368 MSISLVDVSKSNG 380 (428)
Q Consensus 368 ~~~~~v~~yd~~~ 380 (428)
.....++.||..+
T Consensus 446 ~~P~~~~~~d~~~ 458 (751)
T 2xe4_A 446 ATPNTWFDVSPQD 458 (751)
T ss_dssp TEEEEEEEECTTT
T ss_pred CCCCEEEEEECCC
Confidence 6677889999887
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=70.54 E-value=1.2e+02 Score=32.77 Aligned_cols=182 Identities=9% Similarity=0.073 Sum_probs=93.1
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEE--eC--CEEEEEeee-CC---CCCCCceEEEEECCCCceeeCCCCCc
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL--SG--CHLYLFGGK-DP---LKGSMRRVIFYSARTNKWHRAPDMLR 204 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~--~~--~~lyv~GG~-~~---~~~~~~~v~~yd~~t~~W~~~~~~~~ 204 (428)
.+..+||.+ |..+........ ....+++.. .+ ...+++|-. .. .......+++|+...++.+.+.....
T Consensus 808 ~i~lidp~t--~~~i~~~~l~~n-E~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v 884 (1158)
T 3ei3_A 808 NLLIIDQHT--FEVLHAHQFLQN-EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEV 884 (1158)
T ss_dssp EEEEEETTT--CCEEEEEECCTT-EEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEeCCC--CeEEEEEeCCCC-cceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEc
Confidence 567788864 554433221100 112233332 11 146666642 11 11134578888877666665554444
Q ss_pred CCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcC--CCCCCccceEEEEECCEEEEEecCCCCceeEEE
Q 014222 205 RRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFIS--DMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEA 282 (428)
Q Consensus 205 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~ 282 (428)
.-.-.+.+.++|++.+.-| ..+.+||...++.-... ..+. .......+.++.|++ |+......+..
T Consensus 885 ~g~v~al~~~~g~Lla~ig---------~~l~vy~l~~~~~L~~~~~~~~~-i~~~~l~~~~~~I~v--gD~~~Sv~~~~ 952 (1158)
T 3ei3_A 885 KGAVYSMVEFNGKLLASIN---------STVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILV--GDLMRSVLLLA 952 (1158)
T ss_dssp SSCEEEEEEETTEEEEEET---------TEEEEEEECTTSCEEEEEEECCC-SCEEEEEEETTEEEE--EESSBCEEEEE
T ss_pred CCcCEEEeeeCCEEEEEcC---------CEEEEEECCCCceEEEEeecccc-EEEEEEeccCCEEEE--EEhhheEEEEE
Confidence 4444567778887666433 47788887765422211 0111 011123345777665 33334455778
Q ss_pred EeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEccCCc-EEEEEeCC
Q 014222 283 YQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDCKDGC-KIRVYDEV 329 (428)
Q Consensus 283 yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~-~i~~yd~~ 329 (428)
|+...++-..++....+.+..++..+++.-++.+-..++ -+..||++
T Consensus 953 y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 953 YKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp EETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECTT
T ss_pred EEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCCC
Confidence 999999998888655554443444444333333222222 34566664
No 313
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=65.45 E-value=84 Score=28.88 Aligned_cols=145 Identities=8% Similarity=-0.066 Sum_probs=72.3
Q ss_pred eEEECCEEEEEccccCCCCCCCCeEEEEeCCCCce--EEc----CCCCCCccceEEEEE--CCEEEEEecCCCCceeEEE
Q 014222 211 SCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRW--SFI----SDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEA 282 (428)
Q Consensus 211 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W--~~~----~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~ 282 (428)
++..++++|++-|. .+++++.....- ..+ +.+|.. .. ++... +|++|+|-|. ..++
T Consensus 186 v~~~~g~~~fFkg~---------~~Wr~~~~~~~~~p~~I~~~wpgLP~~-iD-Aa~~~~~~g~~~fFkg~-----~yWr 249 (365)
T 3ba0_A 186 VTTVGNKIFFFKDR---------FFWLKVSERPKTSVNLISSLWPTLPSG-IE-AAYEIEARNQVFLFKDD-----KYWL 249 (365)
T ss_dssp EEEETTEEEEEETT---------EEEECCSSCCCCCEEEHHHHCSSCCSS-CC-EEEEEGGGTEEEEEETT-----EEEE
T ss_pred EEEcCCeEEEEeCC---------EEEEEcCCCccCCccchhhhccCCCCC-cc-EEEEecCCCEEEEEeCC-----EEEE
Confidence 45578999998663 445554332211 111 233322 12 23333 7999999653 2466
Q ss_pred EeCCCCC--e-EecCCC-CcCC--CCCceEEE--CCeEEEEEccCCcEEEEEeCCCCceeeCccccc--cc-CCcccccc
Q 014222 283 YQPETDS--W-FPVYDG-MVAG--WRNPSASL--NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKM--HL-GNSRALEA 351 (428)
Q Consensus 283 yd~~~~~--W-~~~~~~-~~~~--~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~--~~-~~~~~~~~ 351 (428)
|+..... + ..+... .+.. .-.++... ++++|++-| +..|+||..+++-..--.-+. .. +... .-
T Consensus 250 ~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG---~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~--~i 324 (365)
T 3ba0_A 250 ISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD---NQYWRYDERRQMMDPGYPKLITKNFQGIGP--KI 324 (365)
T ss_dssp CSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET---TEEEEEETTTTEECSSCCCCHHHHSTTCCS--SC
T ss_pred EcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC---CEEEEEeCCcceecCCCCcchhhcCCCCCC--cc
Confidence 6543211 1 122221 1111 11123333 589999976 589999987654322100000 00 0000 01
Q ss_pred eEEEEe-CCeEEEEeCCCeEEEEEeecCCC
Q 014222 352 AALVPL-NGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 352 ~~~~~~-~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
-+++.. ++++|+|-|. ..+.||..+
T Consensus 325 DaA~~~~~g~~YfFkg~----~ywr~d~~~ 350 (365)
T 3ba0_A 325 DAVFYSKNKYYYFFQGS----NQFEYDFLL 350 (365)
T ss_dssp SEEEEETTTEEEEEETT----EEEEEETTT
T ss_pred ceeeEecCCcEEEEeCC----EEEEEECCc
Confidence 334444 8999999775 367788877
No 314
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=65.07 E-value=1.4e+02 Score=31.21 Aligned_cols=194 Identities=11% Similarity=-0.011 Sum_probs=88.4
Q ss_pred EEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCC
Q 014222 162 CAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPN 241 (428)
Q Consensus 162 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 241 (428)
++...++.+++.|+.++ .+.+||..+.+-... +.....-..++...++..+.|+.+ ..+.++|..
T Consensus 23 lafspdg~~lAsgs~Dg------~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D-------~~v~lWd~~ 87 (902)
T 2oaj_A 23 AAFDFTQNLLAIATVTG------EVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAK-------DTVYVLSLY 87 (902)
T ss_dssp EEEETTTTEEEEEETTS------EEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETT-------CEEEEEETT
T ss_pred EEECCCCCEEEEEeCCC------EEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECc-------CeEEEEECC
Confidence 33333335666766542 577777665443221 111111122333335544445543 588999998
Q ss_pred CCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCCCCCeEecC--------CCCcCCCC-CceEEE--
Q 014222 242 KNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPETDSWFPVY--------DGMVAGWR-NPSASL-- 308 (428)
Q Consensus 242 t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~--------~~~~~~~~-~~~~~~-- 308 (428)
+.+-...-..+ .....+.+ ++...+.|+.+. .+..||..+..-.... ..+..... ..++.+
T Consensus 88 ~~~~~~~~~~~---~~V~~v~~sp~g~~l~sgs~dg---~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 88 SQKVLTTVFVP---GKITSIDTDASLDWMLIGLQNG---SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp TCSEEEEEECS---SCEEEEECCTTCSEEEEEETTS---CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred CCcEEEEEcCC---CCEEEEEECCCCCEEEEEcCCC---cEEEEECCCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 76532111111 11122222 455555554322 3678898876532110 00111110 112333
Q ss_pred -CCeEEEEEccCCcEEEEEeCCCCceeeCcccc--c--ccC-------C-cccccceEEEEeCCeEEEEeCCCeEEEEEe
Q 014222 309 -NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSK--M--HLG-------N-SRALEAAALVPLNGKLCIIRNNMSISLVDV 375 (428)
Q Consensus 309 -~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~--~--~~~-------~-~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~ 375 (428)
++.++++|+.++ .+ +||.++++-...-... . ..+ . ............+++.++.|+.++ .+.+
T Consensus 162 ~~~~~l~~g~~dg-~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg--~i~l 237 (902)
T 2oaj_A 162 RDIGTVLISYEYV-TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN--SLVF 237 (902)
T ss_dssp TEEEEEEEECSSC-EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC--CEEE
T ss_pred CCCCEEEEEeCCC-cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC--eEEE
Confidence 235666766554 68 9999887533221100 0 000 0 000012233444677888887655 3556
Q ss_pred ecCCC
Q 014222 376 SKSNG 380 (428)
Q Consensus 376 yd~~~ 380 (428)
||..+
T Consensus 238 Wd~~~ 242 (902)
T 2oaj_A 238 WDANS 242 (902)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 77655
No 315
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=63.66 E-value=94 Score=28.82 Aligned_cols=116 Identities=10% Similarity=-0.048 Sum_probs=63.3
Q ss_pred cceEEEEeeC-CCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEEE-eCCEEEEEeeeCCC--C-CCCceEEEEECC
Q 014222 118 EEWIYVIKRD-REGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVL-SGCHLYLFGGKDPL--K-GSMRRVIFYSAR 192 (428)
Q Consensus 118 ~~~l~v~gg~-~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~--~-~~~~~v~~yd~~ 192 (428)
...+||.-.. ......+.++|+.+++-. ..++... . .+ +++. ++..+|+....... . ...+.+.++|+.
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~--~~I~vG~--~-P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVI--GMIDGGF--L-PN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEE--EEEEECS--S-CE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEE--EEEECCC--C-Cc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 6788998642 122368999999887643 2223221 1 13 4444 45468888532100 0 013569999999
Q ss_pred CCceeeCCCCCc-CC-----cceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCCce
Q 014222 193 TNKWHRAPDMLR-RR-----HFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKNRW 245 (428)
Q Consensus 193 t~~W~~~~~~~~-~r-----~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W 245 (428)
|++-..--+.+. .| .-+.+++- +..+|+..... .+.+.+.|..+.+=
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~------~~~VsVID~~t~~v 172 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP------APAVGVVDLEGKAF 172 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS------SCEEEEEETTTTEE
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC------CCeEEEEECCCCcE
Confidence 987433111111 11 22223332 45788864321 26899999998854
No 316
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=62.89 E-value=69 Score=27.02 Aligned_cols=100 Identities=8% Similarity=0.095 Sum_probs=54.1
Q ss_pred eEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcC----------CCCCC--ccceEEEE-E--CCEEEEEecCCC
Q 014222 211 SCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFIS----------DMSTA--MVPFIGVV-Y--EGKWFLKGLGSH 275 (428)
Q Consensus 211 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~----------~~p~~--~~~~~~~~-~--~g~lyv~Gg~~~ 275 (428)
+...++++|++-| +.+++|+..++ .+..+ .+|.. ....-++. . ++++|++-|.
T Consensus 68 A~~~~~~~yfFkG---------~~yw~~~~~~~-~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~-- 135 (219)
T 1hxn_A 68 AFSWEDKLYLIQD---------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR-- 135 (219)
T ss_dssp EEEETTEEEEEET---------TEEEEEECSSS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT--
T ss_pred EEEECCcEEEecC---------CEEEEEeCCCC-ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCC--
Confidence 3345899999966 46888886532 11221 22322 11122333 2 6899999663
Q ss_pred CceeEEEEeCCCC---CeEecCCCCcCCCCCceEE------------ECCeEEEEEccCCcEEEEEeCCC
Q 014222 276 RQVLSEAYQPETD---SWFPVYDGMVAGWRNPSAS------------LNRHLYALDCKDGCKIRVYDEVT 330 (428)
Q Consensus 276 ~~~~i~~yd~~~~---~W~~~~~~~~~~~~~~~~~------------~~~~lyv~gG~~~~~i~~yd~~~ 330 (428)
..+.||..+. .|...+. ++... .++.. .++.+|++-| +..+.||..+
T Consensus 136 ---~ywr~d~~~~P~~i~~~~~g-~p~~v-dAa~~~~~~~~~~~~~~~~~~~YFFkg---~~y~r~~~~~ 197 (219)
T 1hxn_A 136 ---RLWWLDLKSGAQATWTELPW-PHEKV-DGALCMEKPLGPNSCSTSGPNLYLIHG---PNLYCYRHVD 197 (219)
T ss_dssp ---EEEEEEGGGGGGCCCEEECC-SCSCC-SEEEEESSCSSSCCSCSSSCEEEEEET---TEEEEESSHH
T ss_pred ---EEEEEeCCCCceEhhhcCCC-CCCCc-CEEEEccccccccceeccCCeEEEEEC---CEEEEEeCCc
Confidence 3578886542 3332221 11111 12222 2467999876 4688888754
No 317
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=62.34 E-value=15 Score=33.66 Aligned_cols=69 Identities=7% Similarity=-0.035 Sum_probs=36.7
Q ss_pred ECCEEEEEecCCCCceeEEEEeCCCC--CeEecCC--CCcCCCCCceEEECCeEEEEEccCCcEEEEEeCCCCceee
Q 014222 263 YEGKWFLKGLGSHRQVLSEAYQPETD--SWFPVYD--GMVAGWRNPSASLNRHLYALDCKDGCKIRVYDEVTDSWSK 335 (428)
Q Consensus 263 ~~g~lyv~Gg~~~~~~~i~~yd~~~~--~W~~~~~--~~~~~~~~~~~~~~~~lyv~gG~~~~~i~~yd~~~~~W~~ 335 (428)
.+|.+|+...+ ..++.+|.+++ .|+.-.. .+...........++.+|++.......++.||.++..|..
T Consensus 9 ~~~~V~v~t~d----G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 9 LSDILIAADVE----GGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEEEEETT----SCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred eCCEEEEEeCC----CeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 45556665421 13567777666 4875432 1111111111113567777764333489999998877653
No 318
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=61.87 E-value=89 Score=27.93 Aligned_cols=124 Identities=10% Similarity=0.147 Sum_probs=61.5
Q ss_pred cceEEEEeeC-CCCceeEEEEeCCCCceEeCCCCCCCC--ccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCC
Q 014222 118 EEWIYVIKRD-REGKISWHAFDPIYQLWQPLPPIPKEY--SEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTN 194 (428)
Q Consensus 118 ~~~l~v~gg~-~~~~~~~~~yd~~~~~W~~l~~~~~~~--~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~ 194 (428)
++.+|+.... ..+...++.++ +++....+...... ....-+++++...++||+..-.... .....+++||+.++
T Consensus 27 ~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~-~~~~~i~~~d~~tg 103 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQS-KSVPKLVAWDTLNN 103 (343)
T ss_dssp TSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHH-TSCCEEEEEETTTT
T ss_pred CCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCc-CCCCeEEEEECCCC
Confidence 4566666421 11114566676 45544443211100 0123356666544489998521100 01347999999988
Q ss_pred ceee-C--CCC-CcCCcc-eeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCC-ceEEc
Q 014222 195 KWHR-A--PDM-LRRRHF-FGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKN-RWSFI 248 (428)
Q Consensus 195 ~W~~-~--~~~-~~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~-~W~~~ 248 (428)
+-.. + +.. ..+... ..+++- ++.+|+..... .....+.+||+.+. .|+.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~----~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 104 QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP----DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS----GGGCEEEEEETTTCCEEEEC
T ss_pred eEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc----CCCCeEEEEECCCCCEEEEe
Confidence 7432 2 211 111111 234444 47899974310 01358899999865 46655
No 319
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=60.10 E-value=1.5e+02 Score=30.06 Aligned_cols=183 Identities=9% Similarity=-0.018 Sum_probs=89.8
Q ss_pred CceEEEEECCCC-ceeeCCCCCcCCcceeeEE-ECC-EEEEEccccCCCCCCCCeEEEEeCCCCceE--EcCCCCCCccc
Q 014222 183 MRRVIFYSARTN-KWHRAPDMLRRRHFFGSCV-INN-CLYVAGGENGGVHRSLRSAEVYDPNKNRWS--FISDMSTAMVP 257 (428)
Q Consensus 183 ~~~v~~yd~~t~-~W~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~--~~~~~p~~~~~ 257 (428)
...++++|..++ +. ++... .....+.+- -++ .||... .+. ......++.++..+..=. .+-.-+.....
T Consensus 200 ~~~l~v~dl~~g~~~--l~~~~-~~~~~~~~WspDg~~l~y~~-~d~--~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~ 273 (751)
T 2xe4_A 200 VYTIEFKRISDPSQT--IADKV-SGTNGEIVWGPDHTSLFYVT-KDE--TLRENKVWRHVMGKLQSEDVCLYEEHNPLFS 273 (751)
T ss_dssp CEEEEEEETTCTTCC--CCCCE-EEECSCCEECSSTTEEEEEE-ECT--TCCEEEEEEEETTSCGGGCEEEEECCCTTCE
T ss_pred eEEEEEEECCCCCEe--CCccc-cCceeeEEEecCCCEEEEEE-ECC--CCCCCEEEEEECCCCchhcEEEEecCCCceE
Confidence 347999999987 52 22111 111111222 233 455442 221 111236777777765311 12111111122
Q ss_pred eEE-EEECCEEEEEecCCCCceeEEEEeCCCC--Ce--EecCCCCcCCCCCceE-EECCeEEEEEccC---CcEEEEEeC
Q 014222 258 FIG-VVYEGKWFLKGLGSHRQVLSEAYQPETD--SW--FPVYDGMVAGWRNPSA-SLNRHLYALDCKD---GCKIRVYDE 328 (428)
Q Consensus 258 ~~~-~~~~g~lyv~Gg~~~~~~~i~~yd~~~~--~W--~~~~~~~~~~~~~~~~-~~~~~lyv~gG~~---~~~i~~yd~ 328 (428)
... ..-+|+..++.........++.+|..+. .+ +.+....... ..... ..++.||+....+ ...|+.+|.
T Consensus 274 ~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~-~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 274 AFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV-RYDVQMHGTSHLVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp EEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC-CEEEEEETTTEEEEEECTTTCTTCEEEEEET
T ss_pred EEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc-eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcC
Confidence 221 2225553333222223445888998765 56 6554321111 11111 2277888886543 247999998
Q ss_pred CC-Cceee-CcccccccCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecC
Q 014222 329 VT-DSWSK-HIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKS 378 (428)
Q Consensus 329 ~~-~~W~~-v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~ 378 (428)
++ ..|+. +-.-. ... .-..+...++.|++.........++++|+
T Consensus 353 ~~~~~~~~~li~~~---~~~---~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 353 GQPSDWSHVLVDHS---EDV---FMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TSTTCCCCEEECCC---SSE---EEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred CCcccceeeEECCC---CCc---EEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 86 67876 42211 110 01233445788888877667778889986
No 320
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=58.93 E-value=1.4e+02 Score=29.37 Aligned_cols=170 Identities=11% Similarity=-0.036 Sum_probs=82.1
Q ss_pred eEEEEeCCCCceEeCCCCCCCCccccccEEEEEeCCEEEEEeeeCCCCCCCceEEEEECCCCce-----eeCCCCCc---
Q 014222 133 SWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLSGCHLYLFGGKDPLKGSMRRVIFYSARTNKW-----HRAPDMLR--- 204 (428)
Q Consensus 133 ~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W-----~~~~~~~~--- 204 (428)
.+.+||... .+..+. -..+...+..++++...+++.++.||.++ .+.+||..++.- ..+..+..
T Consensus 108 ~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG------tVkIWd~~~~~l~~~~~i~l~ti~~~~~ 179 (588)
T 2j04_A 108 NVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG------ELQFFSIRKNSENTPEFYFESSIRLSDA 179 (588)
T ss_dssp CEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS------EEEEEECCCCTTTCCCCEEEEEEECSCT
T ss_pred cEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC------EEEEEECCCCccccccceeeeeeecccc
Confidence 466677433 444443 11111123455666554447788887653 688999887631 01111110
Q ss_pred --CCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCc----eEEcCCCCCCccceEEEEECCEEEEEecCCCCce
Q 014222 205 --RRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNR----WSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQV 278 (428)
Q Consensus 205 --~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~----W~~~~~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~ 278 (428)
...-..++...+. ++.++.+ +.+..+|..++. |+.+........ ..++..+ ...+.++. .
T Consensus 180 gh~~~V~sVawSPdg-Laass~D-------~tVrlWd~~~~~~~~~~~tL~~~h~~~V-~svaFsg-~~LASa~~----~ 245 (588)
T 2j04_A 180 GSKDWVTHIVWYEDV-LVAALSN-------NSVFSMTVSASSHQPVSRMIQNASRRKI-TDLKIVD-YKVVLTCP----G 245 (588)
T ss_dssp TCCCCEEEEEEETTE-EEEEETT-------CCEEEECCCSSSSCCCEEEEECCCSSCC-CCEEEET-TEEEEECS----S
T ss_pred cccccEEEEEEcCCc-EEEEeCC-------CeEEEEECCCCccccceeeecccccCcE-EEEEEEC-CEEEEEeC----C
Confidence 1122233444445 6666653 688899987765 333322221111 1222234 44444432 2
Q ss_pred eEEEEeCCCCCeEecCCCCcCCCCCceEEE----CCeEEEEEccCCcEEEEE
Q 014222 279 LSEAYQPETDSWFPVYDGMVAGWRNPSASL----NRHLYALDCKDGCKIRVY 326 (428)
Q Consensus 279 ~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~----~~~lyv~gG~~~~~i~~y 326 (428)
.+..||..++.=..... ........+.+ ++...++++.++.++|.+
T Consensus 246 tIkLWd~~~~~~~~~~~--gh~~~V~~va~~~s~d~~~La~a~edG~klw~~ 295 (588)
T 2j04_A 246 YVHKIDLKNYSISSLKT--GSLENFHIIPLNHEKESTILLMSNKTSYKVLLE 295 (588)
T ss_dssp EEEEEETTTTEEEEEEC--SCCSCCCEEEETTCSSCEEEEECSSCEEEEEES
T ss_pred eEEEEECCCCeEEEEEc--CCCceEEEEEeeeCCCCCEEEEEcCCCCEEEee
Confidence 57899988776533321 11111112333 455666666555445554
No 321
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=58.22 E-value=83 Score=26.45 Aligned_cols=146 Identities=13% Similarity=0.035 Sum_probs=71.4
Q ss_pred eeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCc-e--EEc----CCCCCCccceEEEEE--CCEEEEEecCCCCceeE
Q 014222 210 GSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNR-W--SFI----SDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLS 280 (428)
Q Consensus 210 ~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~-W--~~~----~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i 280 (428)
+++..++++|++-|. .+++++..... . ..+ +.+|.. . -++... ++++|+|-|. ..
T Consensus 35 Ai~~~~g~~~fFkg~---------~~Wr~~~~~~~~~~P~~I~~~wp~lp~~-I-DAA~~~~~~~k~yfFkG~-----~y 98 (218)
T 1gen_A 35 GIAQIRGEIFFFKDR---------FIWRTVTPRDKPMGPLLVATFWPELPEK-I-DAVYEAPQEEKAVFFAGN-----EY 98 (218)
T ss_dssp EEEEETTEEEEEETT---------EEEEESSTTSCCEEEEEGGGTCTTSCSC-C-SEEEEETTTTEEEEEETT-----EE
T ss_pred EEEeCCCcEEEEECC---------EEEEEeCCCCccCCCEEHHHhcCCCCCC-c-cEEEEECCCCEEEEEeCC-----EE
Confidence 345568999999763 44555443311 1 111 223321 1 122222 6899999653 35
Q ss_pred EEEeCCCCC---eEecCC--CCcCCCCCceE-E--ECCeEEEEEccCCcEEEEEeCCCCceeeCc-cccc--ccCCcccc
Q 014222 281 EAYQPETDS---WFPVYD--GMVAGWRNPSA-S--LNRHLYALDCKDGCKIRVYDEVTDSWSKHI-DSKM--HLGNSRAL 349 (428)
Q Consensus 281 ~~yd~~~~~---W~~~~~--~~~~~~~~~~~-~--~~~~lyv~gG~~~~~i~~yd~~~~~W~~v~-~~~~--~~~~~~~~ 349 (428)
++||..+.. =..+.. .+......-+| . .++++|++-| +..|+||..+++-...- .... -.+...
T Consensus 99 W~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG---~~ywr~d~~~~~v~~gyPr~i~~~w~g~p~-- 173 (218)
T 1gen_A 99 WIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG---DKFWRYNEVKKKMDPGFPKLIADAWNAIPD-- 173 (218)
T ss_dssp EEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET---TEEEEEETTTTEECSSCCEEHHHHSSSCCS--
T ss_pred EEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC---CEEEEEECccccccCCCCcchhhccCCCCC--
Confidence 788742110 011111 11111112233 3 3689999976 57999998776422110 0000 001010
Q ss_pred cceEEEEeC--CeEEEEeCCCeEEEEEeecCCC
Q 014222 350 EAAALVPLN--GKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 350 ~~~~~~~~~--~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.-.+++... +++|++-|. ..+.||..+
T Consensus 174 ~idaAf~~~~~g~~YfFkg~----~y~~~~~~~ 202 (218)
T 1gen_A 174 NLDAVVDLQGGGHSYFFKGA----YYLKLENQS 202 (218)
T ss_dssp SCSEEEECTTTCEEEEEETT----EEEEEETTE
T ss_pred CCCEEEEEcCCCcEEEEECC----EEEEEECCc
Confidence 113444444 899999775 356677766
No 322
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=55.33 E-value=1.7e+02 Score=29.12 Aligned_cols=139 Identities=12% Similarity=0.005 Sum_probs=65.6
Q ss_pred eEEEEeCCCCce---EEcCCCC---CCccceEEEE--ECCEEEEEec-CCCCceeEEEEe----CCCCCeEecCC----C
Q 014222 234 SAEVYDPNKNRW---SFISDMS---TAMVPFIGVV--YEGKWFLKGL-GSHRQVLSEAYQ----PETDSWFPVYD----G 296 (428)
Q Consensus 234 ~v~~yd~~t~~W---~~~~~~p---~~~~~~~~~~--~~g~lyv~Gg-~~~~~~~i~~yd----~~~~~W~~~~~----~ 296 (428)
.+.++|..+.+- ..+.... ........+. -++++++... .......++.+| +.++++..+.. .
T Consensus 225 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~ 304 (719)
T 1z68_A 225 RIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEES 304 (719)
T ss_dssp EEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEEC
T ss_pred EEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEeccccc
Confidence 678889887652 2332210 0111111222 2677666532 223334588899 77776655431 1
Q ss_pred CcCCCC-----CceEEECCe-EEEE-EccCC-cEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCC-
Q 014222 297 MVAGWR-----NPSASLNRH-LYAL-DCKDG-CKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNN- 367 (428)
Q Consensus 297 ~~~~~~-----~~~~~~~~~-lyv~-gG~~~-~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~- 367 (428)
...... .....-+|+ |++. ...++ ..++.+|..+.+...+..-.. .. ...... .++.||+.+..
T Consensus 305 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~---~v---~~~~~~-d~~~i~~~~~~~ 377 (719)
T 1z68_A 305 RTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKW---EA---INIFRV-TQDSLFYSSNEF 377 (719)
T ss_dssp SSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSS---CE---EEEEEE-CSSEEEEEESCG
T ss_pred CCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCce---EE---EEEEEE-eCCEEEEEEecC
Confidence 111111 122223444 5443 32222 479999998887665543110 11 112222 45667766644
Q ss_pred ---CeEEEEEeecCC
Q 014222 368 ---MSISLVDVSKSN 379 (428)
Q Consensus 368 ---~~~~~v~~yd~~ 379 (428)
.....++..+..
T Consensus 378 ~~~~~~~~l~~~~~~ 392 (719)
T 1z68_A 378 EEYPGRRNIYRISIG 392 (719)
T ss_dssp GGCTTCBEEEEEECS
T ss_pred CCCCceEEEEEEeCC
Confidence 233445555553
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=53.02 E-value=1.4e+02 Score=27.33 Aligned_cols=140 Identities=13% Similarity=0.108 Sum_probs=72.1
Q ss_pred CceEEEEECCC--CceeeCCCCC-----cCCcceeeEEE---CC--EEEEEccccCCCCCCCCeEEEEeCCCCceEEcCC
Q 014222 183 MRRVIFYSART--NKWHRAPDML-----RRRHFFGSCVI---NN--CLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISD 250 (428)
Q Consensus 183 ~~~v~~yd~~t--~~W~~~~~~~-----~~r~~~~~~~~---~~--~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~ 250 (428)
...+++||+.+ .+-+++.... ..-.-|+..+. ++ .|||+--.. ....-.+..+|+.+.....+..
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~---~~s~ielf~~d~~~~~~~~~~~ 158 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG---SSSTVEVFKFQEEEKSLLHLKT 158 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST---TCCEEEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC---CCCeEEEEEEECCCCEEEEEec
Confidence 34688888873 3444442211 12233454443 24 588875431 1112345556776666655542
Q ss_pred ---CCCCccceEEEEECCEEEEEecC--C------------CCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE-C-Ce
Q 014222 251 ---MSTAMVPFIGVVYEGKWFLKGLG--S------------HRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL-N-RH 311 (428)
Q Consensus 251 ---~p~~~~~~~~~~~~g~lyv~Gg~--~------------~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~-~~ 311 (428)
.+..+.+-.++.-+|.+|+-+.. . .....+++||+. +.+.+.... ....+.+.- + ..
T Consensus 159 ~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l--~~pNGia~spDg~~ 234 (355)
T 3sre_A 159 IRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGF--DFANGINISPDGKY 234 (355)
T ss_dssp ECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEE--SSEEEEEECTTSSE
T ss_pred cccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCC--cccCcceECCCCCE
Confidence 23334445566678999986431 1 122358899984 444432211 111122322 3 46
Q ss_pred EEEEEccCCcEEEEEeCCC
Q 014222 312 LYALDCKDGCKIRVYDEVT 330 (428)
Q Consensus 312 lyv~gG~~~~~i~~yd~~~ 330 (428)
||+..-.. ..|++||.+.
T Consensus 235 lYvadt~~-~~I~~~~~~~ 252 (355)
T 3sre_A 235 VYIAELLA-HKIHVYEKHA 252 (355)
T ss_dssp EEEEEGGG-TEEEEEEECT
T ss_pred EEEEeCCC-CeEEEEEECC
Confidence 88887433 4899999764
No 324
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=52.35 E-value=1.7e+02 Score=29.09 Aligned_cols=64 Identities=16% Similarity=0.105 Sum_probs=35.7
Q ss_pred ECCeEEEEEccCCcEEEEEeCCCCceeeC-c-ccccc-cCCcccccceEEEEeC--CeEEEEeCCCeEEEEEeecCCC
Q 014222 308 LNRHLYALDCKDGCKIRVYDEVTDSWSKH-I-DSKMH-LGNSRALEAAALVPLN--GKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 308 ~~~~lyv~gG~~~~~i~~yd~~~~~W~~v-~-~~~~~-~~~~~~~~~~~~~~~~--~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
.++++|++-| +..|+||..+++=... + .+... .+... .--+++... +++|++-|.. .+.||..+
T Consensus 547 ~~gktYFFkG---~~ywryd~~~~~vd~gYPk~i~~~w~G~p~--~iDAAf~~~~~g~~YFFkG~~----Ywr~d~~~ 615 (631)
T 1ck7_A 547 KNKKTYIFAG---DKFWRYNEVKKKMDPGFPKLIADAWNAIPD--NLDAVVDLQGGGHSYFFKGAY----YLKLENQS 615 (631)
T ss_dssp TTCEEEEEET---TEEEEEETTTTEECTTCCEETTTSCSSCCT--TCCEEECCTTSCBCEEEETTE----EECCBTTB
T ss_pred CCCeEEEEEC---CEEEEEcCCcccccCCCCcchHhhcCCCCC--CCcEeEEEcCCCeEEEEECCE----EEEEeCcc
Confidence 3689999976 5799999876532111 0 00000 00000 113344443 8999998863 56788766
No 325
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=51.55 E-value=50 Score=28.98 Aligned_cols=54 Identities=15% Similarity=-0.066 Sum_probs=27.2
Q ss_pred eEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEECCeEEEEEc
Q 014222 258 FIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASLNRHLYALDC 317 (428)
Q Consensus 258 ~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG 317 (428)
++++.-+|++|..|........+- .........+. ....+.++.-++++|..|-
T Consensus 152 ~~~~l~~G~v~~wG~n~~gqlg~p--~~~~~~v~~i~----~G~~hs~al~~G~v~~wG~ 205 (282)
T 3qhy_B 152 TALAVKNGGVIAWGDNYFGQTTVP--AEAQSGVDDVA----GGIFHSLALKDGKVIAWGD 205 (282)
T ss_dssp EEEEEETTEEEEEECCTTSTTSCC--GGGGSSEEEEE----ECSSEEEEEETTEEEEEEC
T ss_pred EEEEEECCEEEEecCCCCCCCCCc--eecCCCeEEEE----ecCCEEEEEECCeEEEEEC
Confidence 455555999999985432221100 00011222221 2333444447899999984
No 326
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=50.97 E-value=71 Score=31.59 Aligned_cols=258 Identities=10% Similarity=0.023 Sum_probs=124.8
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEE---EeCCEEEEEeeeCC-----------CCCCC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAV---LSGCHLYLFGGKDP-----------LKGSM 183 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~---~~~~~lyv~GG~~~-----------~~~~~ 183 (428)
+.++||.- .....+.+.|+.+.+-..+-.+|.. ..-|+++. -++.+||+.+.... .....
T Consensus 101 G~~lfVnd---~~~~rVavIdl~t~~~~~ii~ip~g---~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 101 GRFLFMND---KANTRVARVRCDVMKCDAILEIPNA---KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEE---TTTTEEEEEETTTTEEEEEEECSSC---CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred CCEEEEEc---CCCCEEEEEECCCceEeeEEeCCCC---CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 45677743 2335788999999875543344432 22456654 34558888763210 01134
Q ss_pred ceEEEEECCCCc--eeeC-CCCCcCCcceeeEEE-CCEEEEEcccc------------------------------CCCC
Q 014222 184 RRVIFYSARTNK--WHRA-PDMLRRRHFFGSCVI-NNCLYVAGGEN------------------------------GGVH 229 (428)
Q Consensus 184 ~~v~~yd~~t~~--W~~~-~~~~~~r~~~~~~~~-~~~iyv~GG~~------------------------------~~~~ 229 (428)
+.+-+.|..|.+ |+-. +.-| ....+.. +..+|+..-.. ++..
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg~p----d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~ 250 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSGNL----DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY 250 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESSCC----CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred ceEEEEECCCCeEEEEEEeCCCc----cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCe
Confidence 578889998864 4422 1111 1111111 22333332111 0111
Q ss_pred CCCCeEEEEeCCCCceEE-cCCCCCCccceEEEEE-CCE-EEEEecCCCCceeEEEEeCCCCC-e---------EecCCC
Q 014222 230 RSLRSAEVYDPNKNRWSF-ISDMSTAMVPFIGVVY-EGK-WFLKGLGSHRQVLSEAYQPETDS-W---------FPVYDG 296 (428)
Q Consensus 230 ~~~~~v~~yd~~t~~W~~-~~~~p~~~~~~~~~~~-~g~-lyv~Gg~~~~~~~i~~yd~~~~~-W---------~~~~~~ 296 (428)
...+.|-+.|..+.+... +...|.+...+.+.+- +|+ +|+.+.. ...+.+||..+.+ + ..+..
T Consensus 251 ~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~---s~~VsVid~~~~~~~~~~~l~~~~~v~~~- 326 (595)
T 1fwx_A 251 QELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL---SPTVTVLDVTRFDAVFYENADPRSAVVAE- 326 (595)
T ss_dssp EEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT---SSBEEEEEGGGHHHHHHSCCCGGGGEEEC-
T ss_pred eEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC---CCeEEEEECcccccccccccCcccceEEE-
Confidence 123458888988843322 2223333344444443 665 5555432 2346788887542 1 01111
Q ss_pred CcCCCCCceEEE--CCeEEEEEccCCcEEEEEeCCC--------CceeeCcccccccC--CcccccceEEEEeCCeEEEE
Q 014222 297 MVAGWRNPSASL--NRHLYALDCKDGCKIRVYDEVT--------DSWSKHIDSKMHLG--NSRALEAAALVPLNGKLCII 364 (428)
Q Consensus 297 ~~~~~~~~~~~~--~~~lyv~gG~~~~~i~~yd~~~--------~~W~~v~~~~~~~~--~~~~~~~~~~~~~~~~lyv~ 364 (428)
+..+...-...+ +|.+|+.-..+ +.|.+||.++ +.+..+..++.... ......+-.....|..||+.
T Consensus 327 v~vG~gP~h~aF~~dG~aY~t~~ld-sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 327 PELGLGPLHTAFDGRGNAYTSLFLD-SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp CBCCSCEEEEEECTTSEEEEEETTT-TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred cCCCCCcceEEECCCCeEEEEEecC-CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 222222222333 57888887666 4788888766 34666665543210 00000011112345667777
Q ss_pred eCCCe----------EEEEEeecCCCCCCCccccccceeccCC
Q 014222 365 RNNMS----------ISLVDVSKSNGERGASAEHLWETISGKG 397 (428)
Q Consensus 365 GG~~~----------~~~v~~yd~~~~~~~~~~~~W~~~~~~~ 397 (428)
.+..+ ...-..||+.. .+-+.+.++|
T Consensus 406 Nk~skdr~~~~gp~~~~~~ql~dis~-------~~m~lv~d~p 441 (595)
T 1fwx_A 406 SKFSKDRFLNVGPLKPENDQLIDISG-------DKMVLVHDGP 441 (595)
T ss_dssp ESCCTTSSCCCCSSCCEEEEEEECSS-------SSCEEEEEEE
T ss_pred CCCCccccccCCCCCCCcceEEEcCC-------CcEEEEEEEc
Confidence 65431 12236788877 6666655443
No 327
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=50.21 E-value=34 Score=31.16 Aligned_cols=108 Identities=5% Similarity=0.087 Sum_probs=52.2
Q ss_pred CEEEEEecCCC--CceeEEEEeCCCCCeEecCCCCcCCCCCceEEE---CCeEEEEEc--------cCCcEEEEEeCCCC
Q 014222 265 GKWFLKGLGSH--RQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL---NRHLYALDC--------KDGCKIRVYDEVTD 331 (428)
Q Consensus 265 g~lyv~Gg~~~--~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~lyv~gG--------~~~~~i~~yd~~~~ 331 (428)
..+|+...... ....++.||+.+.+-... .+..... .+++ +..||+... ...+.|.+||+.+.
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~---i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGM---VPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEE---EECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEE---ecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 35777643211 123578899887764322 1112222 3333 456888752 11246999998764
Q ss_pred ce-eeCccccccc---CCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 332 SW-SKHIDSKMHL---GNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 332 ~W-~~v~~~~~~~---~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+- ..+...+... ..+ .+.++...+..||+... ...+.+.++|..+
T Consensus 92 ~~~~~i~~~~~~~~~g~~p---~~i~~spdg~~l~v~n~-~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYD---GLFRQTTDGKFIVLQNA-SPATSIGIVDVAK 140 (361)
T ss_dssp CEEEEEEECTTBCCBCCCG---GGEEECTTSSEEEEEEE-SSSEEEEEEETTT
T ss_pred cEEEEEEcCccccccCCCc---ceEEECCCCCEEEEECC-CCCCeEEEEECCC
Confidence 32 2222111000 011 12233233456776542 2235577888877
No 328
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=50.07 E-value=1.1e+02 Score=25.59 Aligned_cols=101 Identities=9% Similarity=-0.019 Sum_probs=53.6
Q ss_pred CCEEEEEccccCCCCCCCCeEEEEeCCCCce---EEcC--CCCCCc-cceEEEE--ECCEEEEEecCCCCceeEEEEeCC
Q 014222 215 NNCLYVAGGENGGVHRSLRSAEVYDPNKNRW---SFIS--DMSTAM-VPFIGVV--YEGKWFLKGLGSHRQVLSEAYQPE 286 (428)
Q Consensus 215 ~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W---~~~~--~~p~~~-~~~~~~~--~~g~lyv~Gg~~~~~~~i~~yd~~ 286 (428)
++++|++-| +..++||..+-.- ..+. .+|... .-.++.. .++++|++-|. ..+.||..
T Consensus 87 ~~k~yfFkG---------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~-----~ywr~d~~ 152 (218)
T 1gen_A 87 EEKAVFFAG---------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD-----KFWRYNEV 152 (218)
T ss_dssp TTEEEEEET---------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT-----EEEEEETT
T ss_pred CCEEEEEeC---------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC-----EEEEEECc
Confidence 589999976 4678888531100 0111 122211 1123333 27899999653 35789987
Q ss_pred CCCeEe-----cCC-CCcCCCCCceE-EEC--CeEEEEEccCCcEEEEEeCCCCc
Q 014222 287 TDSWFP-----VYD-GMVAGWRNPSA-SLN--RHLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 287 ~~~W~~-----~~~-~~~~~~~~~~~-~~~--~~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
+++-.. +.. .+......-+| ..+ +.+|++-| +..|.||..+..
T Consensus 153 ~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg---~~y~~~~~~~~~ 204 (218)
T 1gen_A 153 KKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKG---AYYLKLENQSLK 204 (218)
T ss_dssp TTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEET---TEEEEEETTEEE
T ss_pred cccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEEC---CEEEEEECCcee
Confidence 653211 110 01111111233 333 89999975 578999987654
No 329
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=46.64 E-value=2.3e+02 Score=28.16 Aligned_cols=101 Identities=8% Similarity=-0.010 Sum_probs=51.4
Q ss_pred CCEEEEEccccCCCCCCCCeEEEEeCCCC--ce-EEcCC--CCCCccceEEEE---ECCEEEEEecCCCCceeEEEEeCC
Q 014222 215 NNCLYVAGGENGGVHRSLRSAEVYDPNKN--RW-SFISD--MSTAMVPFIGVV---YEGKWFLKGLGSHRQVLSEAYQPE 286 (428)
Q Consensus 215 ~~~iyv~GG~~~~~~~~~~~v~~yd~~t~--~W-~~~~~--~p~~~~~~~~~~---~~g~lyv~Gg~~~~~~~i~~yd~~ 286 (428)
++++|++-| +..++||..+- -+ +.+.. +|......-++. .++++|++-|. ..++||..
T Consensus 500 ~~k~yFFkG---------~~yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG~-----~ywryd~~ 565 (631)
T 1ck7_A 500 EEKAVFFAG---------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD-----KFWRYNEV 565 (631)
T ss_dssp TTEEEEEET---------TEEEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEETT-----EEEEEETT
T ss_pred CCEEEEEec---------CEEEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEECC-----EEEEEcCC
Confidence 578999866 46788875210 00 11111 121111112222 37899999653 35789876
Q ss_pred CCCeE-----ecCCC-CcCCCCCceEE-E--CCeEEEEEccCCcEEEEEeCCCCc
Q 014222 287 TDSWF-----PVYDG-MVAGWRNPSAS-L--NRHLYALDCKDGCKIRVYDEVTDS 332 (428)
Q Consensus 287 ~~~W~-----~~~~~-~~~~~~~~~~~-~--~~~lyv~gG~~~~~i~~yd~~~~~ 332 (428)
+++=. .+... +......-+|. . ++++|++-| +..|+||..+..
T Consensus 566 ~~~vd~gYPk~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG---~~Ywr~d~~~~~ 617 (631)
T 1ck7_A 566 KKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKG---AYYLKLENQSLK 617 (631)
T ss_dssp TTEECTTCCEETTTSCSSCCTTCCEEECCTTSCBCEEEET---TEEECCBTTBTT
T ss_pred cccccCCCCcchHhhcCCCCCCCcEeEEEcCCCeEEEEEC---CEEEEEeCccce
Confidence 54311 11110 11111112333 3 389999876 468889886653
No 330
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=45.37 E-value=84 Score=27.49 Aligned_cols=19 Identities=11% Similarity=0.298 Sum_probs=13.5
Q ss_pred cceeeEEECCEEEEEcccc
Q 014222 207 HFFGSCVINNCLYVAGGEN 225 (428)
Q Consensus 207 ~~~~~~~~~~~iyv~GG~~ 225 (428)
..|+++.-++++|..|...
T Consensus 72 ~~hs~~l~~G~v~~wG~n~ 90 (282)
T 3qhy_B 72 NYHSLALKDGEVIAWGGNE 90 (282)
T ss_dssp SSEEEEEETTEEEEEECCT
T ss_pred CCEEEEEECCEEEEeeCCC
Confidence 4455555699999998654
No 331
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=45.20 E-value=1.7e+02 Score=26.16 Aligned_cols=163 Identities=10% Similarity=-0.003 Sum_probs=72.0
Q ss_pred cEEEEE-eCCEEEEEeeeCCCCCCCceEEEEECC-CCceeeCCCCCcC--Cccee-eEE-ECC-EEEEEccccCCCCCCC
Q 014222 160 FGCAVL-SGCHLYLFGGKDPLKGSMRRVIFYSAR-TNKWHRAPDMLRR--RHFFG-SCV-INN-CLYVAGGENGGVHRSL 232 (428)
Q Consensus 160 ~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~~~~~--r~~~~-~~~-~~~-~iyv~GG~~~~~~~~~ 232 (428)
++++.. +|..+|+.. . ....+.+||.. +++...+.....+ -.... ++. -++ .+|+.+..+
T Consensus 148 ~~~~~spdG~~l~~~~-~-----~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~------- 214 (365)
T 1jof_A 148 HGMVFDPTETYLYSAD-L-----TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG------- 214 (365)
T ss_dssp EEEEECTTSSEEEEEE-T-----TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT-------
T ss_pred eEEEECCCCCEEEEEc-C-----CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC-------
Confidence 445444 343566552 1 12478899987 6665443222111 11121 222 244 677764321
Q ss_pred CeEEEE--eCCCCceE----EcCCCCCCc---c-------ceEEEE-E--CC-EEEEEecCCC--CceeEEEEeCC-CCC
Q 014222 233 RSAEVY--DPNKNRWS----FISDMSTAM---V-------PFIGVV-Y--EG-KWFLKGLGSH--RQVLSEAYQPE-TDS 289 (428)
Q Consensus 233 ~~v~~y--d~~t~~W~----~~~~~p~~~---~-------~~~~~~-~--~g-~lyv~Gg~~~--~~~~i~~yd~~-~~~ 289 (428)
..+.+| |..+.+.. .+..+|... . ...... + +| .||+...... ....+..||.. +++
T Consensus 215 ~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 215 NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC
T ss_pred CeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC
Confidence 355555 55455542 244444321 1 122233 3 55 4676542111 11246677764 555
Q ss_pred eEecCC---CCcCCCCCceEEE---CC-eEEEEEccCCcEEEEEeCCCCceeeC
Q 014222 290 WFPVYD---GMVAGWRNPSASL---NR-HLYALDCKDGCKIRVYDEVTDSWSKH 336 (428)
Q Consensus 290 W~~~~~---~~~~~~~~~~~~~---~~-~lyv~gG~~~~~i~~yd~~~~~W~~v 336 (428)
.+.+.. .....-...+..- ++ .||+. +.+.+.|.+|+.+.+.-+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~-~~~~~~v~v~~~~~~~l~~~ 347 (365)
T 1jof_A 295 IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT-DDQEGWLEIYRWKDEFLHRV 347 (365)
T ss_dssp EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE-CSSSCEEEEEEEETTEEEEE
T ss_pred EEEeeeeeecCCCCcccceecCCCcCCCEEEEE-EcCCCeEEEEEEchhhCcee
Confidence 553211 0111111112223 44 45554 44445788887766544333
No 332
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=45.18 E-value=2.6e+02 Score=28.29 Aligned_cols=209 Identities=14% Similarity=0.101 Sum_probs=103.0
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCc--cccccEEEEE--eCCEEEEEeeeCCC-CCC-CceEEEEEC
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYS--EALGFGCAVL--SGCHLYLFGGKDPL-KGS-MRRVIFYSA 191 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~--~r~~~~~~~~--~~~~lyv~GG~~~~-~~~-~~~v~~yd~ 191 (428)
.+.+|+.. +. ..++..+..-.+|+.+.+.+.... .....++++. +.+.||+..|.... ... ...+++=.=
T Consensus 35 ~~~~~~~~-~~---ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~D 110 (737)
T 2cn3_A 35 KDLIYARA-AI---GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTD 110 (737)
T ss_dssp TTCEEEEC-SS---SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESS
T ss_pred CCEEEEEe-cC---CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCC
Confidence 35677744 22 258888888899999866332100 0112233333 22368887653110 001 123444333
Q ss_pred CCCceeeCCC-CCc-----CC-cceeeEEE---CCEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCc------
Q 014222 192 RTNKWHRAPD-MLR-----RR-HFFGSCVI---NNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAM------ 255 (428)
Q Consensus 192 ~t~~W~~~~~-~~~-----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~------ 255 (428)
.-.+|+.+.. .+. .+ ..+.+++. .+.||+..... ..+++=+=.-.+|+.+..+|...
T Consensus 111 gG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g-------~gl~~S~DgG~tW~~~~~~~~~~~~~~~p 183 (737)
T 2cn3_A 111 RGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCG-------NGLWRSTDYGVTWSKVESFPNPGTYIYDP 183 (737)
T ss_dssp SSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTT-------CCEEEESSTTSSCEECTTCCCCCCCBSCT
T ss_pred CCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccC-------CcEEEeCCCCcceecccCCCCCcccccCc
Confidence 4557988642 110 12 11334432 25677743110 12332222346899887655321
Q ss_pred --------cceEEEEEC----------CEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE--CCeEEEE
Q 014222 256 --------VPFIGVVYE----------GKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL--NRHLYAL 315 (428)
Q Consensus 256 --------~~~~~~~~~----------g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~ 315 (428)
.+.....++ +.||+.-.... ..+++=.-.-.+|+.+...+. .......++ ++.||+.
T Consensus 184 ~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~--~~v~~S~DgG~tW~~~~~~p~-~~~~~~~~~~~~~~l~~~ 260 (737)
T 2cn3_A 184 NFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKN--ESIYRSTDGGVTWKAVPGQPK-GLLPHHGVLASNGMLYIT 260 (737)
T ss_dssp TSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSS--CCEEEESSTTSCCEECTTCCC-SSEEEEEEECTTSEEEEE
T ss_pred ccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCC--ccEEEEcCCCCceEECCCCCC-cccceEEEECCCCeEEEE
Confidence 112223332 27777532211 112222222457999875332 211112233 7889987
Q ss_pred Ecc--------CCcEEEEEeCCCCceeeCcccc
Q 014222 316 DCK--------DGCKIRVYDEVTDSWSKHIDSK 340 (428)
Q Consensus 316 gG~--------~~~~i~~yd~~~~~W~~v~~~~ 340 (428)
.+. ....+++++-...+|+.+...+
T Consensus 261 ~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~ 293 (737)
T 2cn3_A 261 YGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIP 293 (737)
T ss_dssp EESSCCSSCCSCCEEEEEEETTTCCEEECCSSC
T ss_pred ecCCCCccccccCceEEEEeCCCCCEEEccCCC
Confidence 532 2347999999999999998654
No 333
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=44.52 E-value=2.2e+02 Score=27.33 Aligned_cols=113 Identities=11% Similarity=0.004 Sum_probs=61.0
Q ss_pred cceEEEEeeCCCCceeEEEEeCCCCceEeCCCCCCCCccccccEEEE-------E-eCCEEEEEeeeCCCCCCCceEEEE
Q 014222 118 EEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAV-------L-SGCHLYLFGGKDPLKGSMRRVIFY 189 (428)
Q Consensus 118 ~~~l~v~gg~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~-------~-~~~~lyv~GG~~~~~~~~~~v~~y 189 (428)
.+.||+.-.. ...+.++|+.++....+....... ...-..+++ . .+..||+.--..+.......++++
T Consensus 151 ~~~Lyv~~~~---~~~i~~ID~~~~~v~~l~~~~~~~-~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i 226 (496)
T 3kya_A 151 KDHLYICYDG---HKAIQLIDLKNRMLSSPLNINTIP-TNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYII 226 (496)
T ss_dssp EEEEEEEEET---EEEEEEEETTTTEEEEEECCTTSS-CSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEE
T ss_pred CCEEEEEECC---CCeEEEEECCCCEEEEEEccCccc-cCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEE
Confidence 4567877632 357899999999988775543211 011234444 2 343588874322110113457888
Q ss_pred ECCC-CceeeCC---CCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCC
Q 014222 190 SART-NKWHRAP---DMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPN 241 (428)
Q Consensus 190 d~~t-~~W~~~~---~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~ 241 (428)
+... ..|...+ .+..-...+++++. ++.||+.--. ...+.+||+.
T Consensus 227 ~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~-------~g~V~r~d~~ 277 (496)
T 3kya_A 227 KRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYE-------KGQVFRLDLV 277 (496)
T ss_dssp ECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETT-------TTEEEEECHH
T ss_pred ecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECC-------CCEEEEEecc
Confidence 7554 3553201 11112233445554 4688887432 2579999997
No 334
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=43.56 E-value=2.7e+02 Score=28.10 Aligned_cols=149 Identities=7% Similarity=-0.056 Sum_probs=78.1
Q ss_pred ceEEEEECCC--CceeeCCCCCcCCcceeeEEECCEEEEEccccC---CCCCCCCeEEEEeCCC--------CceEE-cC
Q 014222 184 RRVIFYSART--NKWHRAPDMLRRRHFFGSCVINNCLYVAGGENG---GVHRSLRSAEVYDPNK--------NRWSF-IS 249 (428)
Q Consensus 184 ~~v~~yd~~t--~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~v~~yd~~t--------~~W~~-~~ 249 (428)
+.+++.+... ..|.++ .+ ++...-....++++|+....+- +.......+.+.|..+ ..|+. ++
T Consensus 269 ~~~~~~~~~~~~~~~~~l-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI-NM--PSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT 345 (711)
T ss_dssp EEEEEEECSSSSCEEEEC-CS--CTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC
T ss_pred eeEEEEcCCCCCCcceEe-ec--CCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC
Confidence 5666666542 557766 22 2322224567899999764321 0012346788888654 46886 44
Q ss_pred CCCCCccceEEEEECCEEEEEecCCCCceeEEEEeCCCCCeEecC--CCCcCCCCCceEE--E-CCeEEEE-EccCC-cE
Q 014222 250 DMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEAYQPETDSWFPVY--DGMVAGWRNPSAS--L-NRHLYAL-DCKDG-CK 322 (428)
Q Consensus 250 ~~p~~~~~~~~~~~~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~--~~~~~~~~~~~~~--~-~~~lyv~-gG~~~-~~ 322 (428)
+-. ...-......++.||+..-. .....+..+|+.++.|.... ..+... ...... . ++.+++. .+... ..
T Consensus 346 ~~~-~~~l~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~g~~~~~~~i~lp~~~-~~~~~~~~~~~~~~~~~~ss~~~P~~ 422 (711)
T 4hvt_A 346 PTA-NEVFNFISTTKDRVFLATYD-NVVAKVVTFTLENEQWTKPVVLKLPYQN-AIFGMSSYEEEEEALITIENSIVPPT 422 (711)
T ss_dssp CCT-TEEEEEEEECSSCEEEEEEE-TTEEEEEEECEETTEECCCEEECCCSTT-CEEEEECCTTCSCEEEEEECSSSCCE
T ss_pred CCC-CCeEEEEEEECCEEEEEEEE-CCEEEEEEEECCCCceEEEeccCCCCCe-EEEEEeecCcCCEEEEEEecCCCCCE
Confidence 322 22223344556777765422 22334788998888774322 112111 111111 1 3344444 33322 57
Q ss_pred EEEEeCCCCceeeCccc
Q 014222 323 IRVYDEVTDSWSKHIDS 339 (428)
Q Consensus 323 i~~yd~~~~~W~~v~~~ 339 (428)
++.||.. ++++.+...
T Consensus 423 ~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 423 IYLWVKT-HELKIIRKA 438 (711)
T ss_dssp EEEECTT-SCEEEEECC
T ss_pred EEEEeCC-CcEEEEecC
Confidence 9999988 777766543
No 335
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=41.52 E-value=48 Score=31.31 Aligned_cols=109 Identities=15% Similarity=0.053 Sum_probs=57.1
Q ss_pred CCEEEEEecCCCCc-eeEEEEeCCCCCeEecCCCCcCCCCCceEEE---CCeEEEEEc--------cCCcEEEEEeCCCC
Q 014222 264 EGKWFLKGLGSHRQ-VLSEAYQPETDSWFPVYDGMVAGWRNPSASL---NRHLYALDC--------KDGCKIRVYDEVTD 331 (428)
Q Consensus 264 ~g~lyv~Gg~~~~~-~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~lyv~gG--------~~~~~i~~yd~~~~ 331 (428)
..++||........ ..+.++|+.+++=...- +. +... .+.+ +.+||+..- ..++.|.++|+.+.
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I--~v-G~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMT--DG-GFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEE--EE-CSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEE--EC-CCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 35678875422111 56899999887643221 11 1122 2332 456888742 12357999999987
Q ss_pred ceeeCcccc-cc----cCCcccccceEEEEeCCeEEEEeCCCeEEEEEeecCCC
Q 014222 332 SWSKHIDSK-MH----LGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 332 ~W~~v~~~~-~~----~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~~ 380 (428)
+-..--.++ .. ...+ .+..+...+.+||+... ...+.|.++|..+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P---~~~~~spDGk~lyV~n~-~~~~~VsVID~~t 209 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQ---WMNALTPDNKNLLFYQF-SPAPAVGVVDLEG 209 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCG---GGSEECTTSSEEEEEEC-SSSCEEEEEETTT
T ss_pred cEEEEEECCCccccccCCCc---ceEEEcCCCCEEEEEec-CCCCeEEEEECCC
Confidence 643211111 00 0111 23444445567888642 2234577888877
No 336
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=36.06 E-value=2.1e+02 Score=24.60 Aligned_cols=108 Identities=11% Similarity=-0.011 Sum_probs=53.8
Q ss_pred CCEEEEEecCCCCceeEEEEeCCCCCeEecCCCCcCCCCCceEEE-CCeEEEEEccCCcEEEEEeCCCCc--ee-eCccc
Q 014222 264 EGKWFLKGLGSHRQVLSEAYQPETDSWFPVYDGMVAGWRNPSASL-NRHLYALDCKDGCKIRVYDEVTDS--WS-KHIDS 339 (428)
Q Consensus 264 ~g~lyv~Gg~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~i~~yd~~~~~--W~-~v~~~ 339 (428)
+++||++... ...++.+|+....+..++- ....-..+.+.. ++.+++....+ ..+++|+...+. |. ....+
T Consensus 38 ~~~L~aV~d~---~~~I~~ld~~g~v~~~i~l-~g~~D~EGIa~~~~g~~~vs~E~~-~~l~~~~v~~~~~i~~~~~~~~ 112 (255)
T 3qqz_A 38 SNTLFSTINK---PAAIVEMTTNGDLIRTIPL-DFVKDLETIEYIGDNQFVISDERD-YAIYVISLTPNSEVKILKKIKI 112 (255)
T ss_dssp TTEEEEEEET---TEEEEEEETTCCEEEEEEC-SSCSSEEEEEECSTTEEEEEETTT-TEEEEEEECTTCCEEEEEEEEC
T ss_pred CCEEEEEECC---CCeEEEEeCCCCEEEEEec-CCCCChHHeEEeCCCEEEEEECCC-CcEEEEEcCCCCeeeeeeeecc
Confidence 5789988643 3458899998766776632 111111223333 45555554333 578888765544 42 11111
Q ss_pred ccc-cCCcccccceEEEEeCCeEEEEeCCCeEEEEEeec
Q 014222 340 KMH-LGNSRALEAAALVPLNGKLCIIRNNMSISLVDVSK 377 (428)
Q Consensus 340 ~~~-~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd 377 (428)
+.. ........+.+....+++||+...... ..++.|+
T Consensus 113 ~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p-~~i~~~~ 150 (255)
T 3qqz_A 113 PLQESPTNCGFEGLAYSRQDHTFWFFKEKNP-IEVYKVN 150 (255)
T ss_dssp CCSSCCCSSCCEEEEEETTTTEEEEEEESSS-EEEEEEE
T ss_pred ccccccccCCcceEEEeCCCCEEEEEECcCC-ceEEEEc
Confidence 111 111111123333334568888765443 2355555
No 337
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=34.72 E-value=2.7e+02 Score=25.41 Aligned_cols=93 Identities=17% Similarity=0.181 Sum_probs=50.5
Q ss_pred CCeEEEE--eCCCCceEEcCCC--C--CC-ccceEEEEE----CCEEEEEecCCCCceeEEEEeC---CCCCeE--ecCC
Q 014222 232 LRSAEVY--DPNKNRWSFISDM--S--TA-MVPFIGVVY----EGKWFLKGLGSHRQVLSEAYQP---ETDSWF--PVYD 295 (428)
Q Consensus 232 ~~~v~~y--d~~t~~W~~~~~~--p--~~-~~~~~~~~~----~g~lyv~Gg~~~~~~~i~~yd~---~~~~W~--~~~~ 295 (428)
.+++.+| |+.+++++.+... | .. ......+.+ .+++|++-..... .++.|+. ...+.+ .+..
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G--~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEG--EFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSS--EEEEEEEEECTTSCEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCC--eEEEEEEEeCCCCcccceEEEE
Confidence 3677777 8899999998653 4 22 333444443 4667777433322 3445544 333332 2222
Q ss_pred CCcCCCCCceEEE---CCeEEEEEccCCcEEEEEeCC
Q 014222 296 GMVAGWRNPSASL---NRHLYALDCKDGCKIRVYDEV 329 (428)
Q Consensus 296 ~~~~~~~~~~~~~---~~~lyv~gG~~~~~i~~yd~~ 329 (428)
..... ..-.|+. .++||+-.-. ..||+||.+
T Consensus 176 f~lgs-q~EgcvvDd~~g~Lyv~eEd--~GIw~~da~ 209 (355)
T 3amr_A 176 FKMNS-QTEGMAADDEYGRLYIAEED--EAIWKFSAE 209 (355)
T ss_dssp EECSS-CEEEEEEETTTTEEEEEETT--TEEEEEECS
T ss_pred ecCCC-CcceEEEcCCCCeEEEeccc--ceEEEEeCC
Confidence 11111 2224554 4788887643 459999944
No 338
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=34.39 E-value=3.7e+02 Score=26.92 Aligned_cols=103 Identities=10% Similarity=0.027 Sum_probs=50.3
Q ss_pred eeEEEEeCCC---C---CeEecCCCCc---CCCCCce--EEECCeEEEEEc---cCCcEEEEEeCCCCc--eeeCccccc
Q 014222 278 VLSEAYQPET---D---SWFPVYDGMV---AGWRNPS--ASLNRHLYALDC---KDGCKIRVYDEVTDS--WSKHIDSKM 341 (428)
Q Consensus 278 ~~i~~yd~~~---~---~W~~~~~~~~---~~~~~~~--~~~~~~lyv~gG---~~~~~i~~yd~~~~~--W~~v~~~~~ 341 (428)
..++.+|..+ + +...+..+.. ....... -.-+++++++-- .+...|+.+|.++++ |........
T Consensus 228 ~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l 307 (740)
T 4a5s_A 228 VKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH 307 (740)
T ss_dssp EEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred eEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEe
Confidence 3588899988 7 6766643111 1111111 234788655432 122368999988776 432221110
Q ss_pred ----ccCCccc-ccceEEEEeCCe-EE-EEeCCCeEEEEEeecCCC
Q 014222 342 ----HLGNSRA-LEAAALVPLNGK-LC-IIRNNMSISLVDVSKSNG 380 (428)
Q Consensus 342 ----~~~~~~~-~~~~~~~~~~~~-ly-v~GG~~~~~~v~~yd~~~ 380 (428)
....... ....-....+|+ |+ ......+...++.||..+
T Consensus 308 ~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 308 IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTC
T ss_pred eeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCC
Confidence 0000000 001223344554 44 343345567789999876
No 339
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=32.74 E-value=3e+02 Score=25.45 Aligned_cols=60 Identities=10% Similarity=0.009 Sum_probs=33.2
Q ss_pred EEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE--CCEEEEEccccCCCCCCCCeEEEEeCCCC
Q 014222 169 HLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI--NNCLYVAGGENGGVHRSLRSAEVYDPNKN 243 (428)
Q Consensus 169 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~v~~yd~~t~ 243 (428)
.+++.|+.++ .+.+||..++.-.. .... .......+.. +++.++.|+.+ ..+.+||+...
T Consensus 163 ~~las~s~Dg------~v~iwD~~~~~~~~-~~~~-~~~~v~~v~wspdg~~lasgs~d-------g~v~iwd~~~~ 224 (434)
T 2oit_A 163 SMVAVCLADG------SIAVLQVTETVKVC-ATLP-STVAVTSVCWSPKGKQLAVGKQN-------GTVVQYLPTLQ 224 (434)
T ss_dssp TEEEEEETTS------CEEEEEESSSEEEE-EEEC-GGGCEEEEEECTTSSCEEEEETT-------SCEEEECTTCC
T ss_pred CEEEEEECCC------eEEEEEcCCCccee-eccC-CCCceeEEEEcCCCCEEEEEcCC-------CcEEEEccCCc
Confidence 5777777543 58888887763211 0011 1111222222 56677777754 47889998733
No 340
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=31.03 E-value=3.1e+02 Score=25.12 Aligned_cols=18 Identities=17% Similarity=0.016 Sum_probs=13.3
Q ss_pred cccEEEEEeCCEEEEEee
Q 014222 158 LGFGCAVLSGCHLYLFGG 175 (428)
Q Consensus 158 ~~~~~~~~~~~~lyv~GG 175 (428)
..|+++...+++||..|-
T Consensus 130 ~~h~~alt~~G~v~~wG~ 147 (406)
T 4d9s_A 130 DSHCLAVTMEGEVQSWGR 147 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred hhheEEEcCCCcEEEeCC
Confidence 467777776668999984
No 341
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=30.20 E-value=3e+02 Score=26.47 Aligned_cols=146 Identities=9% Similarity=-0.028 Sum_probs=68.7
Q ss_pred eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeE--EE--CC-EEEEEccccCCCCCCCCeEEEEeC
Q 014222 166 SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSC--VI--NN-CLYVAGGENGGVHRSLRSAEVYDP 240 (428)
Q Consensus 166 ~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~--~~--~~-~iyv~GG~~~~~~~~~~~v~~yd~ 240 (428)
.+ ..++.|+.+ ..+.+||..+..- ....+.........+ .. ++ .+++.|+.+ ..+.+||.
T Consensus 276 ~~-~~lasgs~D------gtV~lWD~~~~~~-~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D-------~tvklWD~ 340 (524)
T 2j04_B 276 SP-TTVVCGFKN------GFVAEFDLTDPEV-PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD-------GYFYIFNP 340 (524)
T ss_dssp SS-SEEEEEETT------SEEEEEETTBCSS-CSEEEECSSSCEEEEEEECCTTSCCEEEEEETT-------SEEEEECG
T ss_pred CC-CeEEEEeCC------CEEEEEECCCCCC-ceEEeecccccEEEEEEEcCCCCCeEEEEeccC-------CeEEEEEC
Confidence 44 356666654 3688999876420 000011111111111 12 34 677777764 58889998
Q ss_pred CCCceEE-c-CCCCCCccceEEEEE-CCEEEEEecCCCCceeEEEEeCCCCCe-EecCCCCcCCCCCceEE--ECCeEEE
Q 014222 241 NKNRWSF-I-SDMSTAMVPFIGVVY-EGKWFLKGLGSHRQVLSEAYQPETDSW-FPVYDGMVAGWRNPSAS--LNRHLYA 314 (428)
Q Consensus 241 ~t~~W~~-~-~~~p~~~~~~~~~~~-~g~lyv~Gg~~~~~~~i~~yd~~~~~W-~~~~~~~~~~~~~~~~~--~~~~lyv 314 (428)
.+.+-.. + ....... -.+++.. ++..++.|+... ++..||+.+..= ..+..... ...++. -++.+++
T Consensus 341 ~~~~~~~~~~~~~~~~~-v~~v~fsp~~~~l~s~~~d~---tv~lwd~~~~~~~~~l~gH~~---~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 341 KDIATTKTTVSRFRGSN-LVPVVYCPQIYSYIYSDGAS---SLRAVPSRAAFAVHPLVSRET---TITAIGVSRLHPMVL 413 (524)
T ss_dssp GGHHHHCEEEEECSCCS-CCCEEEETTTTEEEEECSSS---EEEEEETTCTTCCEEEEECSS---CEEEEECCSSCCBCE
T ss_pred CCCCcccccccccccCc-ccceEeCCCcCeEEEeCCCC---cEEEEECcccccceeeecCCC---ceEEEEeCCCCCeEE
Confidence 6542110 0 0011000 0122223 466666665432 466788876431 11111000 001121 2567777
Q ss_pred EEccCCcEEEEEeCCCCcee
Q 014222 315 LDCKDGCKIRVYDEVTDSWS 334 (428)
Q Consensus 315 ~gG~~~~~i~~yd~~~~~W~ 334 (428)
.|+.++ .|.+||+..+.+.
T Consensus 414 Sgs~Dg-tv~lwd~~~~~~~ 432 (524)
T 2j04_B 414 AGSADG-SLIITNAARRLLH 432 (524)
T ss_dssp EEETTT-EEECCBSCSSTTT
T ss_pred EEECCC-EEEEEechHhhcc
Confidence 777664 7888887665443
No 342
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=28.80 E-value=75 Score=29.21 Aligned_cols=64 Identities=9% Similarity=-0.076 Sum_probs=36.9
Q ss_pred CEEEEEecCCCCce-eEEEEeCCCCCeEecCCCCcCCCCCceEEE---CCeEEEEEc--------cCCcEEEEEeCCCCc
Q 014222 265 GKWFLKGLGSHRQV-LSEAYQPETDSWFPVYDGMVAGWRNPSASL---NRHLYALDC--------KDGCKIRVYDEVTDS 332 (428)
Q Consensus 265 g~lyv~Gg~~~~~~-~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~lyv~gG--------~~~~~i~~yd~~~~~ 332 (428)
.++||......... .+..+|+.+++=. ...+. +... .+.+ +.++|+... ..++.|.++|+.+.+
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~--~~i~v-G~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTL--GHSLG-AFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEE--EEEEE-CTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CeEEEECCccCCccceEEEEECCCCeEE--EEEeC-CCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 46788754322222 6788998776533 22122 2222 3333 567888852 234679999999865
No 343
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=27.50 E-value=4.9e+02 Score=26.22 Aligned_cols=148 Identities=8% Similarity=0.027 Sum_probs=77.9
Q ss_pred eeEEEEeCCC--CceEeCCCCCCCCccccccE-EEEEeCCEEEEEeeeC--C--CCCCCceEEEEECCC--------Cce
Q 014222 132 ISWHAFDPIY--QLWQPLPPIPKEYSEALGFG-CAVLSGCHLYLFGGKD--P--LKGSMRRVIFYSART--------NKW 196 (428)
Q Consensus 132 ~~~~~yd~~~--~~W~~l~~~~~~~~~r~~~~-~~~~~~~~lyv~GG~~--~--~~~~~~~v~~yd~~t--------~~W 196 (428)
+.++..|... ++|.++. +|. ... +...++ ++|+....+ . .......+.++|..+ ..|
T Consensus 269 ~~~~~~~~~~~~~~~~~l~-~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 340 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKIN-MPS------DATLQGSFKE-YVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSL 340 (711)
T ss_dssp EEEEEEECSSSSCEEEECC-SCT------TCEEEEEETT-EEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTC
T ss_pred eeEEEEcCCCCCCcceEee-cCC------cceEeeeECC-EEEEEECcccccccccCCCCeEEEEECCcccccccccccc
Confidence 5666666553 5677772 232 122 234455 888865322 1 001345688888654 468
Q ss_pred ee-CCCCCcCCcceeeEEECCEEEEEccccCCCCCCCCeEEEEeCCCCceEEc--CCCCCCccceEEEE--E-CCEEEEE
Q 014222 197 HR-APDMLRRRHFFGSCVINNCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFI--SDMSTAMVPFIGVV--Y-EGKWFLK 270 (428)
Q Consensus 197 ~~-~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~--~~~p~~~~~~~~~~--~-~g~lyv~ 270 (428)
+. +++-. .+.--.+...++.+|+..-.+ ....+.++|+.++.|... -++|.. ....... . ++.+++.
T Consensus 341 ~~~~~~~~-~~~l~~~~~~~~~l~~~~~~~-----~~~~l~~~~~~~g~~~~~~~i~lp~~-~~~~~~~~~~~~~~~~~~ 413 (711)
T 4hvt_A 341 KILFTPTA-NEVFNFISTTKDRVFLATYDN-----VVAKVVTFTLENEQWTKPVVLKLPYQ-NAIFGMSSYEEEEEALIT 413 (711)
T ss_dssp EEEECCCT-TEEEEEEEECSSCEEEEEEET-----TEEEEEEECEETTEECCCEEECCCST-TCEEEEECCTTCSCEEEE
T ss_pred eEEECCCC-CCeEEEEEEECCEEEEEEEEC-----CEEEEEEEECCCCceEEEeccCCCCC-eEEEEEeecCcCCEEEEE
Confidence 86 33322 222224455567777765432 135788999888887432 234432 1122222 1 3345544
Q ss_pred ecCCCCceeEEEEeCCCCCeEecCC
Q 014222 271 GLGSHRQVLSEAYQPETDSWFPVYD 295 (428)
Q Consensus 271 Gg~~~~~~~i~~yd~~~~~W~~~~~ 295 (428)
.........++.||.. ++++.+..
T Consensus 414 ~ss~~~P~~~~~~d~~-~~~~~l~~ 437 (711)
T 4hvt_A 414 IENSIVPPTIYLWVKT-HELKIIRK 437 (711)
T ss_dssp EECSSSCCEEEEECTT-SCEEEEEC
T ss_pred EecCCCCCEEEEEeCC-CcEEEEec
Confidence 3333344468889987 77776654
No 344
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=24.62 E-value=3.8e+02 Score=24.03 Aligned_cols=57 Identities=9% Similarity=-0.096 Sum_probs=31.9
Q ss_pred CCeEEEEEccCCcEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEeCCCeEE
Q 014222 309 NRHLYALDCKDGCKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIRNNMSIS 371 (428)
Q Consensus 309 ~~~lyv~gG~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~ 371 (428)
.+.+|+++|.....|.+||..+..-..... ... .. ....+...+|++++.+...+..
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~--~~~-~~---V~svafspdG~~LA~as~~Gv~ 383 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSNSIPI--QLG-MP---IVDFCWHQDGSHLAIATEGSVL 383 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCCEEEE--ECS-SC---EEEEEECTTSSEEEEEESSEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEec--CCC-Cc---EEEEEEcCCCCEEEEEeCCCeE
Confidence 356666666555689999988765332211 111 11 1133445677877777665544
No 345
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=23.90 E-value=4.3e+02 Score=24.35 Aligned_cols=59 Identities=15% Similarity=0.175 Sum_probs=32.1
Q ss_pred CEEEEEccccCCCCCCCCeEEEEeCCCCceEEcCCCCCCccceEEEEE--CCEEEEEecCCCCceeEEEEeCC
Q 014222 216 NCLYVAGGENGGVHRSLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVY--EGKWFLKGLGSHRQVLSEAYQPE 286 (428)
Q Consensus 216 ~~iyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~g~lyv~Gg~~~~~~~i~~yd~~ 286 (428)
+.+++.|+.+ ..+.+||..+..-.. ..... ......+.. +|+..+.|+.+. .+..||+.
T Consensus 162 ~~~las~s~D-------g~v~iwD~~~~~~~~-~~~~~-~~~v~~v~wspdg~~lasgs~dg---~v~iwd~~ 222 (434)
T 2oit_A 162 PSMVAVCLAD-------GSIAVLQVTETVKVC-ATLPS-TVAVTSVCWSPKGKQLAVGKQNG---TVVQYLPT 222 (434)
T ss_dssp TTEEEEEETT-------SCEEEEEESSSEEEE-EEECG-GGCEEEEEECTTSSCEEEEETTS---CEEEECTT
T ss_pred CCEEEEEECC-------CeEEEEEcCCCccee-eccCC-CCceeEEEEcCCCCEEEEEcCCC---cEEEEccC
Confidence 5677777764 578899988763211 11111 111222222 566666665432 46789987
No 346
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=20.52 E-value=6.4e+02 Score=25.08 Aligned_cols=127 Identities=12% Similarity=0.096 Sum_probs=61.8
Q ss_pred eEEEEeCCC---C---ceEEcCCCC----CCccc-eEEEEECCEEEEEec-CCCCceeEEEEeCCCCC--eEecCCC---
Q 014222 234 SAEVYDPNK---N---RWSFISDMS----TAMVP-FIGVVYEGKWFLKGL-GSHRQVLSEAYQPETDS--WFPVYDG--- 296 (428)
Q Consensus 234 ~v~~yd~~t---~---~W~~~~~~p----~~~~~-~~~~~~~g~lyv~Gg-~~~~~~~i~~yd~~~~~--W~~~~~~--- 296 (428)
.+.++|..+ . +...+.... ...+. .....-+|+++++-- ..+....+..+|+.+++ |......
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~ 308 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHI 308 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEE
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEee
Confidence 678899998 6 666654311 11111 122345888655432 22233457888887765 3322110
Q ss_pred --CcCCC------CCceEEECCeEEE-EEc-cCC-cEEEEEeCCCCceeeCcccccccCCcccccceEEEEeCCeEEEEe
Q 014222 297 --MVAGW------RNPSASLNRHLYA-LDC-KDG-CKIRVYDEVTDSWSKHIDSKMHLGNSRALEAAALVPLNGKLCIIR 365 (428)
Q Consensus 297 --~~~~~------~~~~~~~~~~lyv-~gG-~~~-~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~~~~~~~lyv~G 365 (428)
....+ ......-+|+.++ +.. .++ ..|+.||.+++.-..+..-.-. . .......+++||..+
T Consensus 309 ~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~---v----~~~~~~d~~~i~f~~ 381 (740)
T 4a5s_A 309 EMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWE---V----IGIEALTSDYLYYIS 381 (740)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSC---E----EEEEEECSSEEEEEE
T ss_pred eccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEE---E----EEEEEEeCCEEEEEE
Confidence 01111 1122233555333 432 222 5799999988766665432111 1 011112367777776
Q ss_pred CC
Q 014222 366 NN 367 (428)
Q Consensus 366 G~ 367 (428)
..
T Consensus 382 ~~ 383 (740)
T 4a5s_A 382 NE 383 (740)
T ss_dssp SC
T ss_pred ec
Confidence 54
No 347
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=20.33 E-value=6.2e+02 Score=24.87 Aligned_cols=72 Identities=15% Similarity=0.197 Sum_probs=44.3
Q ss_pred eCCEEEEEeeeCCCCCCCceEEEEECCCCceeeCCCCCcCCcceeeEEE----CCEEEEEccccC-----CC-----CCC
Q 014222 166 SGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVI----NNCLYVAGGENG-----GV-----HRS 231 (428)
Q Consensus 166 ~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~----~~~iyv~GG~~~-----~~-----~~~ 231 (428)
+|..+|+... ....+.+.|+.+.+-.++-.+|....-|++++. .+.+|+.+.... +. ...
T Consensus 100 DG~~lfVnd~------~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 100 DGRFLFMNDK------ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEET------TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCCEEEEEcC------CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 4547888521 345899999999886654456655556666652 467877753311 00 122
Q ss_pred CCeEEEEeCCCC
Q 014222 232 LRSAEVYDPNKN 243 (428)
Q Consensus 232 ~~~v~~yd~~t~ 243 (428)
.+.+-+.|.++.
T Consensus 174 ~~~vtvID~~t~ 185 (595)
T 1fwx_A 174 VNVFTAVDADKW 185 (595)
T ss_dssp EEEEEEEETTTT
T ss_pred CceEEEEECCCC
Confidence 346788899876
Done!