Query 014223
Match_columns 428
No_of_seqs 239 out of 615
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 03:02:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014223.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014223hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4636 Uncharacterized conser 100.0 1.1E-70 2.3E-75 541.6 20.8 375 2-428 106-483 (483)
2 KOG2557 Uncharacterized conser 100.0 1.9E-41 4.2E-46 334.7 19.2 319 37-426 85-422 (427)
3 smart00584 TLDc domain in TBC 100.0 3.6E-37 7.9E-42 281.9 17.5 162 167-372 2-165 (165)
4 KOG2372 Oxidation resistance p 100.0 2E-33 4.4E-38 263.6 14.5 168 160-372 70-241 (241)
5 PF07534 TLD: TLD; InterPro: 100.0 6.5E-29 1.4E-33 218.0 14.0 137 205-372 1-139 (139)
6 COG5142 OXR1 Oxidation resista 99.9 2.3E-24 5E-29 194.8 10.7 165 165-372 33-212 (212)
7 KOG2801 Probable Rab-GAPs [Int 99.7 1.8E-18 3.9E-23 168.7 -3.3 162 192-375 355-557 (559)
8 PF09069 EF-hand_3: EF-hand; 83.9 4.3 9.4E-05 33.9 6.7 69 38-130 15-83 (90)
9 COG5485 Predicted ester cyclas 43.8 44 0.00096 29.7 4.7 16 366-381 115-130 (131)
10 PF13499 EF-hand_7: EF-hand do 33.6 67 0.0015 23.8 3.9 21 34-54 9-29 (66)
11 cd05022 S-100A13 S-100A13: S-1 30.4 1.6E+02 0.0035 24.2 5.9 32 6-53 6-37 (89)
12 PF13833 EF-hand_8: EF-hand do 27.3 1.5E+02 0.0032 21.1 4.7 51 39-120 2-52 (54)
13 cd05027 S-100B S-100B: S-100B 25.2 3.3E+02 0.0072 22.1 6.9 34 6-55 6-40 (88)
14 KOG0034 Ca2+/calmodulin-depend 23.4 1E+02 0.0022 29.1 3.9 97 8-130 87-183 (187)
15 KOG0044 Ca2+ sensor (EF-Hand s 23.2 2.3E+02 0.005 26.9 6.2 82 29-134 106-187 (193)
16 cd00051 EFh EF-hand, calcium b 22.6 2.1E+02 0.0046 19.4 4.7 19 35-53 10-28 (63)
17 cd05029 S-100A6 S-100A6: S-100 21.6 4.4E+02 0.0096 21.4 7.3 32 6-52 8-39 (88)
18 PF13202 EF-hand_5: EF hand; P 21.3 73 0.0016 19.9 1.7 18 34-51 8-25 (25)
19 cd05026 S-100Z S-100Z: S-100Z 20.5 4.3E+02 0.0094 21.5 6.7 18 105-122 65-82 (93)
20 cd05030 calgranulins Calgranul 20.3 4.6E+02 0.0099 21.1 6.8 32 6-52 6-37 (88)
No 1
>KOG4636 consensus Uncharacterized conserved protein with TLDc domain [Function unknown]
Probab=100.00 E-value=1.1e-70 Score=541.63 Aligned_cols=375 Identities=32% Similarity=0.479 Sum_probs=335.4
Q ss_pred chhhhHHHHHHHHHHHHHhcCCcceeeeecCCCCCCcccccCHHHHHHHHHHHHHHhhcCccccccCCcccccccchhHH
Q 014223 2 PASMLLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHL 81 (428)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ll~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (428)
.-+|..|+++||++.+.+.+++...++|++| +||+|.+.++..++.+|||+||+|||.++. ..++|+.+|++.++
T Consensus 106 ~n~m~~nt~~~~v~~~q~~~~F~p~~~~ssd-~dcyIk~~~~vsev~~fL~vC~t~a~~gra----~~~~c~fi~~~~~~ 180 (483)
T KOG4636|consen 106 MNYMTGNTNSNLVTHQQFMDKFTPLYGTSSD-TDCYIKILQPVSEVHHFLKVCSTSAGAGRA----IQGDCQFIKILVEE 180 (483)
T ss_pred HHhhccCchhhhhhhHHhhhccCccccCCcc-cceEEEEeechhHHHHHHHHHHhhhcCCch----hhcCCcHHHHHHHH
Confidence 3468889999999999999999999999999 999999999999999999999999999983 34589999999999
Q ss_pred HHHHHHHhhhcCCC--cccccccccCCCcccchhhhHHHHHhhCCChhHHHHHHHHhhhccCCCCCCCCCCCCCCCCCCC
Q 014223 82 VLSAVESCAEVGSD--VNFWDCNISDLEIQLPVGKFLTWTLTTVPSLTDCFTQFVYARLQSCVTSENPSEISTSSFGDIS 159 (428)
Q Consensus 82 ~~~a~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~F~~wi~~~~P~l~~~l~~~~~h~l~s~~~d~~~~~~~~~~~~~~~ 159 (428)
+.+++.+|-++.++ +..|..+.+ .+-.+.+++|+.|...++|+++++.+++....|+.+-+..+ .++ +..++..
T Consensus 181 ~t~~~~~c~dS~Sgnsi~rW~~~n~-~~l~l~vgKfltwaLmTvpcltEcqn~~c~~~lqt~~~aed--nPs-stavD~S 256 (483)
T KOG4636|consen 181 MTDGKTGCEDSQSGNSIIRWRRENC-EKLTLAVGKFLTWALMTVPCLTECQNRVCSAVLQTKIIAED--NPS-STAVDYS 256 (483)
T ss_pred HhcccccccccccCCceeeehhhhh-HHHHHHHHHHHHHHhhccchhhhhhhhhhcceecceeeccc--CCC-ccccccc
Confidence 99999999888776 667999966 88999999999999999999999999999999998887553 222 2344555
Q ss_pred CCCCCCCCccCchHHHHhhhccCCcchHHHHhhcCCCCCCCCCceEEEecCccchhHHHHHHHhcccCCCEEEEEEcCCC
Q 014223 160 STKAQDTHLLSPGRAWTISLTFRSSISEEFLKLCCPVDGEEAEENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSG 239 (428)
Q Consensus 160 ~~~~~~s~lL~~~~~w~Ls~~lp~~~~~~ils~~lP~~~~~~~w~lLYss~~hG~Sl~sf~~~v~~~~gPTlLLI~~~~g 239 (428)
...+....|++.+++|+|+++||+.++++|+ .+.|....-..|+|||.|.+||.++|||+++|++|+||||+|+++++.
T Consensus 257 ~skTsed~L~plgqaW~l~~slp~~ys~eil-~~pp~tsGeshwtlLY~S~~HG~g~NRf~~~V~gYrgPtlvi~~tkde 335 (483)
T KOG4636|consen 257 SSKTSEDILSPLGQAWYLQSSLPAVYSPEIL-AKPPETSGESHWTLLYTSLQHGIGTNRFETLVFGYRGPTLVIFRTKDE 335 (483)
T ss_pred cccccchhhhhHHHHHHHhccCCcccCchhc-cCCCCCCCCCceeecchhhhhccchhhHHHHhccccCCeEEEEEecCC
Confidence 5556667789999999999999999999999 577887778899999999999999999999999999999999998874
Q ss_pred CCCCccccccceEEEeeecCCcccCCccccCCc-eEEEEcCCeeEeecCCCCCceEEeccCCCCCccCCCCCCceEEECC
Q 014223 240 DASDHETSARKWIIGALTQQGFENKDVFYGSSG-NLYAISPTFHVFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGG 318 (428)
Q Consensus 240 ~~~~~~~~~~~~vfGay~~~~Wk~s~~ffG~~~-fLFqL~P~~~vf~~sg~n~n~vY~n~~~~~~~y~~~~~~~GIgfGG 318 (428)
+++++ -+++.|++++.+||.+. ++|++.|.|+++.. ..|++|||++. |+| |.||+||+
T Consensus 336 ---------r~~vi--A~~qew~e~~~~fgG~~~~~f~i~P~f~~~~~---s~N~~Y~nl~~--rg~-----p~Gl~fg~ 394 (483)
T KOG4636|consen 336 ---------RVVVI--AADQEWRESGNRFGGTFTSFFEIVPNFRRIDG---SANSIYCNLKL--RGS-----PYGLSFGN 394 (483)
T ss_pred ---------cEEEE--eechhhhhhccccccccceeEEeecceEEecC---CCceEEEeccc--cCC-----ccceecCC
Confidence 45666 46999999998887777 99999999999994 48999999974 455 99999999
Q ss_pred CCCCceEEEeCCCCCceeecccccccCCCCCCCCCCCCCCcceeEeEEEEEeecCcchHHHHHHHHHHHHHHHHhhcccC
Q 014223 319 TMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIGGRSAKQMQMSYKKREELFTEQRRKVD 398 (428)
Q Consensus 319 ~~g~~~L~ID~~le~g~~r~~~~~~Tf~~g~L~p~~~~~~~~F~I~~IEVWG~g~~~~~~~Q~~~~~~e~~eae~rR~V~ 398 (428)
.+|++.|.||++|++-++ . +....|.+||||||||.+++|.|+++++||++++||||+|+
T Consensus 395 tlgne~i~idedF~kItv--------------l------pveA~ildIEvWGcgg~~~re~Qqk~kkwq~~~te~~r~v~ 454 (483)
T KOG4636|consen 395 TLGNEEIKIDEDFDKITV--------------L------PVEAEILDIEVWGCGGAGTREDQQKLKKWQKQQTEKHRRVP 454 (483)
T ss_pred CCCCceeeeccchhhccc--------------c------chhcceeeEEEeccCCcccHHHHHHHHHHHHHHHhhccccc
Confidence 999999999999998765 2 35578999999999999999999999999999999999999
Q ss_pred ccccCCCCCccchhhhcccCCCCccccccC
Q 014223 399 LKKFASWEDSPEKMMMDMMSDPNAVRREDR 428 (428)
Q Consensus 399 l~~~~~~~d~~dR~lLeMaG~~~~~~re~r 428 (428)
|+. .+|+|+|||+||||||.+|+++||+|
T Consensus 455 L~~-~tW~D~Pdk~llem~G~qn~~~~~~~ 483 (483)
T KOG4636|consen 455 LPG-NTWDDNPDKTLLEMAGFQNSTERAQM 483 (483)
T ss_pred CCC-CccccChHHHHHHHhCCCCCchhccC
Confidence 994 46999999999999999999999997
No 2
>KOG2557 consensus Uncharacterized conserved protein, contains TLDc domain [Function unknown]
Probab=100.00 E-value=1.9e-41 Score=334.65 Aligned_cols=319 Identities=19% Similarity=0.315 Sum_probs=231.1
Q ss_pred CcccccCHHHHHHHHHHHHHHhhcCccccccCCcccccccchhHHHHHHHHHhhhcCCC-----cccccc----------
Q 014223 37 KISGFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVESCAEVGSD-----VNFWDC---------- 101 (428)
Q Consensus 37 ~~~~~i~~~~~~~ll~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~~---------- 101 (428)
-..+..+.++....|+....++-..-+ + -.++.+-+-.+|++-++.++. .--|..
T Consensus 85 ~~~~~gt~dq~a~mL~~~~~~sgn~~~---~-------~~q~eQ~~~~vlks~~~~ess~~es~~~~~~d~af~~~~~~~ 154 (427)
T KOG2557|consen 85 ATYEKGTDDQIAEMLYQTLDVNGNGVL---S-------RSQLEQFLVVVLKSVFSTESSDAESSDYKKMDDAFLNAATFS 154 (427)
T ss_pred hhhccCcccHHHHHHHHHHhhcccccc---c-------hhHHHHHHHHHhhheeeecccchhhhhhhhhhccccchhhhc
Confidence 344555666777766655444333322 1 114445555555555433222 221222
Q ss_pred -cccCCCcccchhhhHHHHHhhCCChhHHHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCccCchHHHHhhhc
Q 014223 102 -NISDLEIQLPVGKFLTWTLTTVPSLTDCFTQFVYARLQSCVTSENPSEISTSSFGDISSTKAQDTHLLSPGRAWTISLT 180 (428)
Q Consensus 102 -~~~~~~~~i~~~~F~~wi~~~~P~l~~~l~~~~~h~l~s~~~d~~~~~~~~~~~~~~~~~~~~~s~lL~~~~~w~Ls~~ 180 (428)
+.....++..++.|++|+. ++..+.+++...|+.+..+-. ....|.+...+...+.-.++..+.+|+|...
T Consensus 155 ke~e~t~p~~~le~~~s~~p-----~f~~i~r~~fs~L~~~~g~sk---~pil~~l~~~~~~sh~~~~i~~~~~l~in~~ 226 (427)
T KOG2557|consen 155 KEDEGTEPGMSLEDFRSWCP-----FFPTIRKFLFSLLMPPSGVSK---GPILPHLLYEDSVSHDRLLIKKEYALHINGA 226 (427)
T ss_pred cccccCCCchhHHHHhhhch-----HHHHHHHHHHHHhccccCCcc---Cccccccccccccccccceeecchhheeccc
Confidence 1224456667777777765 233344555566665553321 1122434445556667788888899999988
Q ss_pred cCCcchHHHHhhcCCCCCCCCCceEEEecCccchhHHHHHHHhcccCCCEEEEEEcCCCCCCCccccccceEEEeeecCC
Q 014223 181 FRSSISEEFLKLCCPVDGEEAEENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQG 260 (428)
Q Consensus 181 lp~~~~~~ils~~lP~~~~~~~w~lLYss~~hG~Sl~sf~~~v~~~~gPTlLLI~~~~g~~~~~~~~~~~~vfGay~~~~ 260 (428)
||- .+..+|++||+++.||.||++|..++.+ +||++++|+++++ +|||+|++++
T Consensus 227 lp~--------------~~r~~wr~lysss~~gqsfSt~l~~~~~-~gp~v~vI~d~d~-----------~vFGgyASq~ 280 (427)
T KOG2557|consen 227 LPH--------------HERVEWKLLYSSSVHGQSFSTFLGHTSG-MGPSVLIIKDTEG-----------YVFGGYASQP 280 (427)
T ss_pred CCc--------------chhhceeeeeeecccccchhhhhhhccC-CCCeEEEEEcCCC-----------ceecccccCc
Confidence 772 2456899999999999999999999996 8999999999996 8999999999
Q ss_pred cccCCccccCCc-eEEEEcCCeeEeecCCCCCceEEeccCCCCCccCCCCCCceEEECCCCCCceEEEeCCCCCceeecc
Q 014223 261 FENKDVFYGSSG-NLYAISPTFHVFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGGTMGNERIFIDEDFARVTVRHH 339 (428)
Q Consensus 261 Wk~s~~ffG~~~-fLFqL~P~~~vf~~sg~n~n~vY~n~~~~~~~y~~~~~~~GIgfGG~~g~~~L~ID~~le~g~~r~~ 339 (428)
|...+.|+||.+ |||||.|...||++||.|+||+|+|.. +++.|+||||||....++||||.+|..|++ -
T Consensus 281 we~~pQF~Gd~~~fLfqL~Pkma~y~aTgyn~~yqylN~~-------QQtiPNGLGmGGq~n~fgL~Id~sFg~Gqs--~ 351 (427)
T KOG2557|consen 281 WERYPQFYGDMKSFLFQLNPKMAIYRATGYNTNYQYLNFT-------QQTIPNGLGMGGQINHFGLFIDASFGQGQS--F 351 (427)
T ss_pred ccccCccCCccceeeeeecchheeecccCCccceEEeccc-------cccCCCccccCcccceeeEEEEeecCCCcc--c
Confidence 999999999999 999999999999999999999999864 467899999999999999999999999987 5
Q ss_pred cccccCCCCCCCCCCCCCCcceeEeEEEEEeecCcchHHHHHHHHHHHHHHHHhhcccCccccCCCCCccchhhhcccCC
Q 014223 340 AVDRTYQHGSLIPHQGFLPVESLILEIEVWGIGGRSAKQMQMSYKKREELFTEQRRKVDLKKFASWEDSPEKMMMDMMSD 419 (428)
Q Consensus 340 ~~~~Tf~~g~L~p~~~~~~~~F~I~~IEVWG~g~~~~~~~Q~~~~~~e~~eae~rR~V~l~~~~~~~d~~dR~lLeMaG~ 419 (428)
..|.||+++.|+. .++|+|..||||++|+.... ||++ +.-+.++..+|. |.+||||||+||+
T Consensus 352 e~cTty~spqLSk-----~~~fqi~~iEvWavgD~p~e-Eq~e-----kgn~~kkSvLD~-------dpEdrAmLElaGk 413 (427)
T KOG2557|consen 352 ECCTTYESPQLSK-----TSRFQIEVIEVWAVGDAPNE-EQDE-----KGNAMKKSVLDR-------DPEDRAMLELAGK 413 (427)
T ss_pred cccccCCCccccc-----cccccceEEEEEecCCCcch-hhhh-----ccCccccccccC-------CHHHHHHHHHhcc
Confidence 6788998888876 46799999999999996654 3432 122223444454 5699999999999
Q ss_pred CCccc--cc
Q 014223 420 PNAVR--RE 426 (428)
Q Consensus 420 ~~~~~--re 426 (428)
...++ ||
T Consensus 414 smhSeglRe 422 (427)
T KOG2557|consen 414 SMHSEGLRE 422 (427)
T ss_pred ccccccccC
Confidence 76654 55
No 3
>smart00584 TLDc domain in TBC and LysM domain containing proteins.
Probab=100.00 E-value=3.6e-37 Score=281.92 Aligned_cols=162 Identities=32% Similarity=0.563 Sum_probs=143.0
Q ss_pred CccCchHHHHhhhccCCcchHHHHhhcCCCCCCCCCceEEEecCccchhHHHHHHHhcccCCCEEEEEEcCCCCCCCccc
Q 014223 167 HLLSPGRAWTISLTFRSSISEEFLKLCCPVDGEEAEENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHET 246 (428)
Q Consensus 167 ~lL~~~~~w~Ls~~lp~~~~~~ils~~lP~~~~~~~w~lLYss~~hG~Sl~sf~~~v~~~~gPTlLLI~~~~g~~~~~~~ 246 (428)
.||++..+..|...|| .+.+..+|+|||++++||+|+++|+++|.++++||||||+++++
T Consensus 2 ~iL~~~~~~~l~~~lP-------------~~~~~~~~~llyss~~~G~s~~~~~~~~~~~~~P~lliik~~~~------- 61 (165)
T smart00584 2 SILSEEILALINSHLP-------------TRAEGYPWTLLYSSSQHGYSLNTLYRKVEGYRPPTLLIIKDTDG------- 61 (165)
T ss_pred ccCCHHHHHHHHHhCC-------------HhHhCCCeEEEEEcCcCCccHHHHHHHhcccCCCEEEEEEeCCC-------
Confidence 4777777777776665 44455679999999999999999999999999999999999985
Q ss_pred cccceEEEeeecCCcccCCccccCCc-eEEEEcCCeeEeecCCCCC-ceEEeccCCCCCccCCCCCCceEEECCCCCCce
Q 014223 247 SARKWIIGALTQQGFENKDVFYGSSG-NLYAISPTFHVFLPSGKEK-NFVYSHLHPSGRVYEPHPKPVGIAFGGTMGNER 324 (428)
Q Consensus 247 ~~~~~vfGay~~~~Wk~s~~ffG~~~-fLFqL~P~~~vf~~sg~n~-n~vY~n~~~~~~~y~~~~~~~GIgfGG~~g~~~ 324 (428)
.|||||++++|+.+..|||+++ |||+|.|++++|+|++.|+ .|++++ +.+|+|||+.|+++
T Consensus 62 ----~ifGaf~~~~w~~~~~~~G~~~sFLF~l~p~~~~y~~~~~n~~~~~~~~-------------~~~~~~Ggg~g~~~ 124 (165)
T smart00584 62 ----EVFGAYASQAWRVSDHFYGTGESFLFQLNPKFVVYDWTGKNKYYYINGT-------------PDSLPIGGGGGGFG 124 (165)
T ss_pred ----CEEEEEcCCCCccCCcEECCCCeEEEEEcCCceEEcccccCcEEEEecC-------------CCeEeecCCCCcee
Confidence 6999999999999999999999 9999999999999998886 566652 68999999988899
Q ss_pred EEEeCCCCCceeecccccccCCCCCCCCCCCCCCcceeEeEEEEEeec
Q 014223 325 IFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIG 372 (428)
Q Consensus 325 L~ID~~le~g~~r~~~~~~Tf~~g~L~p~~~~~~~~F~I~~IEVWG~g 372 (428)
||||++|++|++. .|.||++++|.+. ..+|+|.+|||||+|
T Consensus 125 l~id~~l~~g~s~---~~~tf~~~~L~~~----~~~f~I~~iEVw~~g 165 (165)
T smart00584 125 LWIDEDLNHGSSS---HCKTFGNPPLSTK----QEDFLILDIEVWGFG 165 (165)
T ss_pred EEEehhhCCeEeC---CCCCcCCccccCC----CCCEEEEEEEEEecC
Confidence 9999999999964 5999999999963 367999999999997
No 4
>KOG2372 consensus Oxidation resistance protein [Replication, recombination and repair]
Probab=100.00 E-value=2e-33 Score=263.62 Aligned_cols=168 Identities=22% Similarity=0.447 Sum_probs=150.2
Q ss_pred CCCCCCCCccCchHHHHhhhccCCcchHHHHhhcCCCCCCCC-CceEEEecCccchhHHHHHHHhcccCCCEEEEEEcCC
Q 014223 160 STKAQDTHLLSPGRAWTISLTFRSSISEEFLKLCCPVDGEEA-EENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANS 238 (428)
Q Consensus 160 ~~~~~~s~lL~~~~~w~Ls~~lp~~~~~~ils~~lP~~~~~~-~w~lLYss~~hG~Sl~sf~~~v~~~~gPTlLLI~~~~ 238 (428)
|.....+.||++.++-+| +..||.+.+.. .|+++||+.+||+|+++||+++.....|.||+||+++
T Consensus 70 ~~~~~~~~ll~~~~~~~l-------------~e~lp~R~q~~~pW~liyst~~hG~Sl~TlY~~~~~~~~p~lLvird~d 136 (241)
T KOG2372|consen 70 PDLRYKSQLLTPEMIRQL-------------REHLPPRVQGYTPWRLIYSTEKHGFSLRTLYRSMAELDEPVLLVIRDTD 136 (241)
T ss_pred cccccccccCCHHHHHHH-------------HhhCCcceeeecchhhhcccccccccHHHHHHhhhcccCcEEEEEEcCC
Confidence 334455677777664444 34677777777 9999999999999999999999999999999999999
Q ss_pred CCCCCccccccceEEEeeecCCcccCCccccCCc-eEEEEcC--CeeEeecCCCCCceEEeccCCCCCccCCCCCCceEE
Q 014223 239 GDASDHETSARKWIIGALTQQGFENKDVFYGSSG-NLYAISP--TFHVFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIA 315 (428)
Q Consensus 239 g~~~~~~~~~~~~vfGay~~~~Wk~s~~ffG~~~-fLFqL~P--~~~vf~~sg~n~n~vY~n~~~~~~~y~~~~~~~GIg 315 (428)
| .|||||++++.+.+.+|||+++ |||++.| ++.||+|||.|..|+||. +..|+
T Consensus 137 g-----------~vFGa~~~~~i~p~dhyyGtgetFLft~~~~~e~~vy~~TG~n~f~i~c~-------------~dfLa 192 (241)
T KOG2372|consen 137 G-----------DVFGAFVSDAIRPNDHYYGTGETFLFTFFPGREFKVYRWTGDNSFFIYCD-------------KDFLA 192 (241)
T ss_pred C-----------CEeeEeeccceeccCCcCCCCCeEEEEecCCCceeEeeecCCcceEEEec-------------hhHhh
Confidence 8 5999999999999999999999 9999999 899999999999999995 47899
Q ss_pred ECCCCCCceEEEeCCCCCceeecccccccCCCCCCCCCCCCCCcceeEeEEEEEeec
Q 014223 316 FGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIG 372 (428)
Q Consensus 316 fGG~~g~~~L~ID~~le~g~~r~~~~~~Tf~~g~L~p~~~~~~~~F~I~~IEVWG~g 372 (428)
|||+.|+|+||||++|..|. +..|.||+|-+|++. .+|.|++||||+++
T Consensus 193 ~G~GgGRfgLwLD~dL~~G~---S~~ceTFgN~~Ls~~-----qdF~Iq~lElW~f~ 241 (241)
T KOG2372|consen 193 FGGGGGRFGLWLDGDLLHGS---SHPCETFGNEPLSDK-----QDFIIQDLELWGFE 241 (241)
T ss_pred hcCCCCceEEEecccccccc---cCCCcccCCcccCCc-----CceEEEEEEEEeeC
Confidence 99999999999999999998 789999999999974 56999999999984
No 5
>PF07534 TLD: TLD; InterPro: IPR006571 TLDc is a domain of unknown function, restricted to eukaryotes, and commonly found in TBC (IPR000195 from INTERPRO) and LysM (IPR002482 from INTERPRO) domain containing proteins [].; PDB: 4ACJ_A.
Probab=99.96 E-value=6.5e-29 Score=217.98 Aligned_cols=137 Identities=34% Similarity=0.618 Sum_probs=95.8
Q ss_pred EEEecCccchhHHHHHHHhcccCCCEEEEEEcCCCCCCCccccccceEEEeeecCCcccCCc-cccCCc-eEEEEcCCee
Q 014223 205 LLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENKDV-FYGSSG-NLYAISPTFH 282 (428)
Q Consensus 205 lLYss~~hG~Sl~sf~~~v~~~~gPTlLLI~~~~g~~~~~~~~~~~~vfGay~~~~Wk~s~~-ffG~~~-fLFqL~P~~~ 282 (428)
|||++++||+|+++|+++|. +++|||+||++.++ .|||||++++|+.+.. |+|+.+ |||+|.|.++
T Consensus 1 Lly~s~~dG~s~~~f~~~~~-~~~~~l~iv~t~~g-----------~iFG~y~~~~~~~~~~~~~~~~~~FlF~l~~~~~ 68 (139)
T PF07534_consen 1 LLYSSSRDGFSFNTFHSKCD-GKGPTLLIVKTSDG-----------QIFGAYTSQPWKSSNKGYFGDSESFLFSLEPKFK 68 (139)
T ss_dssp EEEEHHHH-S-HHHHHHHHT-T-S-EEEEEEETTS------------EEEEEESS-----SS--B--TT-EEEE-SSS-E
T ss_pred CcCccchhCcCHHHHHHhcC-CCCCEEEEEECCCC-----------cEEEEEeCCcccccCccccCCCCeEEEEeccccc
Confidence 79999999999999999999 68999999999986 6999999999998765 999999 9999999999
Q ss_pred EeecCCCCCceEEeccCCCCCccCCCCCCceEEECCCCCCceEEEeCCCCCceeecccccccCCCCCCCCCCCCCCccee
Q 014223 283 VFLPSGKEKNFVYSHLHPSGRVYEPHPKPVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESL 362 (428)
Q Consensus 283 vf~~sg~n~n~vY~n~~~~~~~y~~~~~~~GIgfGG~~g~~~L~ID~~le~g~~r~~~~~~Tf~~g~L~p~~~~~~~~F~ 362 (428)
+|+|++++..|+|++ ..||+||++.++++||||.++++++++ .+.||+++++.+.. +..|+
T Consensus 69 ~~~~~~~~~~~~~~~-------------~~~~~fG~~~~~~~l~i~~~~~~~~~~---~~~ty~~~~l~~~~---~~~f~ 129 (139)
T PF07534_consen 69 IFKWTGKNQNYINCN-------------NQGLGFGGGSNGFDLWIDSDFNSGSSS---HSETYGNPPLSNDG---QESFD 129 (139)
T ss_dssp EEE--SS----EEEE-------------TTEEEES-SSSS-SEEEETTS-EEEE-----BTTTTB--SS--S---SSEEE
T ss_pred eeecccccceeeecc-------------CCcceEeecCCceEEEEeCCCCcEEEe---CCCccCCCcccCCC---CCCcE
Confidence 999988887777764 468999998778999999999999864 46999999998521 47899
Q ss_pred EeEEEEEeec
Q 014223 363 ILEIEVWGIG 372 (428)
Q Consensus 363 I~~IEVWG~g 372 (428)
|.+||||+||
T Consensus 130 i~~iEV~~~g 139 (139)
T PF07534_consen 130 IDEIEVWGLG 139 (139)
T ss_dssp EEEEEEEE--
T ss_pred EEEEEEEEEC
Confidence 9999999997
No 6
>COG5142 OXR1 Oxidation resistance protein [DNA replication, recombination, and repair]
Probab=99.91 E-value=2.3e-24 Score=194.77 Aligned_cols=165 Identities=21% Similarity=0.294 Sum_probs=142.4
Q ss_pred CCCccCchHHHHhhhccCCcchHHHHhhcCCCCCCCCCceEEEecCccchhHHHHHHHhcccCCC-----EEEEEEcCCC
Q 014223 165 DTHLLSPGRAWTISLTFRSSISEEFLKLCCPVDGEEAEENLLYRSSLHGRGLNRFWSNIEGYHGP-----LLILVSANSG 239 (428)
Q Consensus 165 ~s~lL~~~~~w~Ls~~lp~~~~~~ils~~lP~~~~~~~w~lLYss~~hG~Sl~sf~~~v~~~~gP-----TlLLI~~~~g 239 (428)
...||++..+-.|-..||.-+. ....|+||||..+||+|+++|+..+..-..| .||.||+++|
T Consensus 33 K~~llt~e~~~~ire~lp~Ry~------------~~t~W~llySl~~~G~Sl~t~y~~~~~~~~~frrvg~VLa~rd~dg 100 (212)
T COG5142 33 KASLLTEEIVTRIRESLPDRYK------------YSTSWRLLYSLFENGFSLRTFYESFGENEWPFRRVGFVLACRDKDG 100 (212)
T ss_pred hcccCCHHHHHHHHHhhhHHHH------------HHHHHHHHHHHhhcchhHHHHHHHhCcccCcccCceEEEEEEcCCC
Confidence 4568888887777766664331 1246999999999999999999999987777 9999999998
Q ss_pred CCCCccccccceEEEeeecCCcccCCccccCCc-eEEEE--cC-------CeeEeecCCCCCceEEeccCCCCCccCCCC
Q 014223 240 DASDHETSARKWIIGALTQQGFENKDVFYGSSG-NLYAI--SP-------TFHVFLPSGKEKNFVYSHLHPSGRVYEPHP 309 (428)
Q Consensus 240 ~~~~~~~~~~~~vfGay~~~~Wk~s~~ffG~~~-fLFqL--~P-------~~~vf~~sg~n~n~vY~n~~~~~~~y~~~~ 309 (428)
+ +||||.++..+...+|||+++ |||++ .| ++.+|+-+|.+..-+||.
T Consensus 101 d-----------~FGaf~~d~~~pa~hy~G~~e~FLwk~~~~p~~~~~~k~~~~yp~~g~~~f~iYCt------------ 157 (212)
T COG5142 101 D-----------LFGAFFEDRIRPARHYYGRDEMFLWKAARRPADRLADKEVAVYPISGGKGFGIYCT------------ 157 (212)
T ss_pred C-----------EeeeechhheeccCCCCCCccEEEEeeccCCccccCcceeEEeEeecCCceEEEEc------------
Confidence 5 999999999999999999999 99999 45 589999999888889993
Q ss_pred CCceEEECCCCCCceEEEeCCCCCceeecccccccCCCCCCCCCCCCCCcceeEeEEEEEeec
Q 014223 310 KPVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIG 372 (428)
Q Consensus 310 ~~~GIgfGG~~g~~~L~ID~~le~g~~r~~~~~~Tf~~g~L~p~~~~~~~~F~I~~IEVWG~g 372 (428)
+.-++|||+.|+++||||.+|+.|. +..+.||+|-.|+..- ..|.|..||||-++
T Consensus 158 -~~FlafG~g~grygLl~d~sLl~g~---S~p~~tfgN~~Ls~~g----~~f~Iv~lElW~v~ 212 (212)
T COG5142 158 -PDFLAFGCGGGRYGLLIDKSLLDGE---SHPVETFGNCLLSSKG----HFFRIVYLELWLVQ 212 (212)
T ss_pred -hHHhhhcCCCCcEEEEecCcccccc---cCCCccccccccccCC----CceEEEEEEEEeeC
Confidence 6889999999999999999999998 7789999999998632 33899999999875
No 7
>KOG2801 consensus Probable Rab-GAPs [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.67 E-value=1.8e-18 Score=168.71 Aligned_cols=162 Identities=23% Similarity=0.369 Sum_probs=128.1
Q ss_pred hcCCCCCCCCCceEEEecCccchhHHHHHHHhcccCCCEEEEEEcCCCCCCCccccccceEEEeeecCCcccCC------
Q 014223 192 LCCPVDGEEAEENLLYRSSLHGRGLNRFWSNIEGYHGPLLILVSANSGDASDHETSARKWIIGALTQQGFENKD------ 265 (428)
Q Consensus 192 ~~lP~~~~~~~w~lLYss~~hG~Sl~sf~~~v~~~~gPTlLLI~~~~g~~~~~~~~~~~~vfGay~~~~Wk~s~------ 265 (428)
.++|.+....+.-+||||-+||+|+.+||-.+.+ +.||+|||+++. +.+-|||.+..|.+.+
T Consensus 355 swvperfalcqplllfsslqhgyslarfyfqceg-heptllliktmq-----------kevcgaylstdwsernkfggkl 422 (559)
T KOG2801|consen 355 SWVPERFALCQPLLLFSSLQHGYSLARFYFQCEG-HEPTLLLIKTMQ-----------KEVCGAYLSTDWSERNKFGGKL 422 (559)
T ss_pred HhhhHHHhhhhHHHHHHHhhcchhhhhheeeccC-CCCeeehHHHHH-----------HHHhhHhcccchhhhcccCcee
Confidence 5889988888999999999999999999999998 789999999998 5799999999998753
Q ss_pred ccccCCc-eEEEEcCCeeEeecCC-------CCCceE---------------------------EeccCCCCCccCCCCC
Q 014223 266 VFYGSSG-NLYAISPTFHVFLPSG-------KEKNFV---------------------------YSHLHPSGRVYEPHPK 310 (428)
Q Consensus 266 ~ffG~~~-fLFqL~P~~~vf~~sg-------~n~n~v---------------------------Y~n~~~~~~~y~~~~~ 310 (428)
.|||+++ |+|+|.|+.+-|.|.- +....| -||.........+.+-
T Consensus 423 gffgtgecfvfrlqpevqryewvvikhpeltkppplmaaeptaplshsassdpadrlspflaarhfnlpsktesmfmagg 502 (559)
T KOG2801|consen 423 GFFGTGECFVFRLQPEVQRYEWVVIKHPELTKPPPLMAAEPTAPLSHSASSDPADRLSPFLAARHFNLPSKTESMFMAGG 502 (559)
T ss_pred cccccccEEEEEechhhheeeEEEEcCcccCCCCCcccCCCCCCCCccccCCchhhcChHHHHHhcCCCcchhHHHhcCC
Confidence 5799999 9999999999888752 111111 0111111111112234
Q ss_pred CceEEECCCCCCceEEEeCCCCCceeecccccccCCCCCCCCCCCCCCcceeEeEEEEEeecCcc
Q 014223 311 PVGIAFGGTMGNERIFIDEDFARVTVRHHAVDRTYQHGSLIPHQGFLPVESLILEIEVWGIGGRS 375 (428)
Q Consensus 311 ~~GIgfGG~~g~~~L~ID~~le~g~~r~~~~~~Tf~~g~L~p~~~~~~~~F~I~~IEVWG~g~~~ 375 (428)
.+.+..||+ |+-+||||.++..|. ++.|.||+|.+|.+ ++|.|..||.||+.+++
T Consensus 503 sdclivggg-ggqalyidgdlnrgr---tshcdtfnnqplcs------enfliaaveawgfqdpd 557 (559)
T KOG2801|consen 503 SDCLIVGGG-GGQALYIDGDLNRGR---TSHCDTFNNQPLCS------ENFLIAAVEAWGFQDPD 557 (559)
T ss_pred CceEEEcCC-CceeEEecccccCCc---cccccccCCCccch------hhHHHHHHHHhcCCCCC
Confidence 567778877 568999999999997 66799999999986 67999999999998765
No 8
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=83.94 E-value=4.3 Score=33.94 Aligned_cols=69 Identities=14% Similarity=0.256 Sum_probs=44.2
Q ss_pred cccccCHHHHHHHHHHHHHHhhcCccccccCCcccccccchhHHHHHHHHHhhhcCCCcccccccccCCCcccchhhhHH
Q 014223 38 ISGFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVESCAEVGSDVNFWDCNISDLEIQLPVGKFLT 117 (428)
Q Consensus 38 ~~~~i~~~~~~~ll~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~F~~ 117 (428)
.+|.++...+..||.-|..|--.=.. ++-+.. +..+|++||+.. ..+.+|+..+|.+
T Consensus 15 ~~g~~~~~~l~~lL~d~lqip~~vgE-------~~aFg~-----~e~sv~sCF~~~-----------~~~~~I~~~~Fl~ 71 (90)
T PF09069_consen 15 SNGCMDQRKLGLLLHDVLQIPRAVGE-------GPAFGY-----IEPSVRSCFQQV-----------QLSPKITENQFLD 71 (90)
T ss_dssp TTS-B-HHHHHHHHHHHHHHHHHTT--------GGGGT-------HHHHHHHHHHT-----------TT-S-B-HHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHhCc-------cccccC-----cHHHHHHHhccc-----------CCCCccCHHHHHH
Confidence 46789999999999999988653211 111222 789999999982 3688999999999
Q ss_pred HHHhhCCChhHHH
Q 014223 118 WTLTTVPSLTDCF 130 (428)
Q Consensus 118 wi~~~~P~l~~~l 130 (428)
|+..- |...-.|
T Consensus 72 wl~~e-Pq~lVWL 83 (90)
T PF09069_consen 72 WLMSE-PQSLVWL 83 (90)
T ss_dssp HHHT---TTTTHH
T ss_pred HHHhC-CCeeeHH
Confidence 99988 6654444
No 9
>COG5485 Predicted ester cyclase [General function prediction only]
Probab=43.83 E-value=44 Score=29.67 Aligned_cols=16 Identities=31% Similarity=0.636 Sum_probs=15.0
Q ss_pred EEEEeecCcchHHHHH
Q 014223 366 IEVWGIGGRSAKQMQM 381 (428)
Q Consensus 366 IEVWG~g~~~~~~~Q~ 381 (428)
+|||+++++.+++.|+
T Consensus 115 ~~vwsv~Dk~ai~rQL 130 (131)
T COG5485 115 VEVWSVIDKMAIERQL 130 (131)
T ss_pred EeeehhccHHHHHHhh
Confidence 8999999999999986
No 10
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=33.56 E-value=67 Score=23.81 Aligned_cols=21 Identities=10% Similarity=0.044 Sum_probs=16.5
Q ss_pred CCCCcccccCHHHHHHHHHHH
Q 014223 34 ADCKISGFLRPIDVLMIFWMC 54 (428)
Q Consensus 34 ~~~~~~~~i~~~~~~~ll~~~ 54 (428)
-|.+..|.|+.++|+.++...
T Consensus 9 ~D~d~~G~i~~~el~~~~~~~ 29 (66)
T PF13499_consen 9 FDKDGDGYISKEELRRALKHL 29 (66)
T ss_dssp HSTTSSSEEEHHHHHHHHHHT
T ss_pred HcCCccCCCCHHHHHHHHHHh
Confidence 466678999999999987643
No 11
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=30.41 E-value=1.6e+02 Score=24.19 Aligned_cols=32 Identities=13% Similarity=0.052 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHHHhcCCcceeeeecCCCCCCcccccCHHHHHHHHHH
Q 014223 6 LLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWM 53 (428)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ll~~ 53 (428)
++.+|..+|.+ |.. . +..|.|+.++|+.+|.-
T Consensus 6 ai~~l~~~F~~------------fd~---~-~~~g~i~~~ELk~ll~~ 37 (89)
T cd05022 6 AIETLVSNFHK------------ASV---K-GGKESLTASEFQELLTQ 37 (89)
T ss_pred HHHHHHHHHHH------------HhC---C-CCCCeECHHHHHHHHHH
Confidence 56788888888 322 1 45678999999999875
No 12
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=27.27 E-value=1.5e+02 Score=21.09 Aligned_cols=51 Identities=8% Similarity=0.036 Sum_probs=34.1
Q ss_pred ccccCHHHHHHHHHHHHHHhhcCccccccCCcccccccchhHHHHHHHHHhhhcCCCcccccccccCCCcccchhhhHHH
Q 014223 39 SGFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVESCAEVGSDVNFWDCNISDLEIQLPVGKFLTW 118 (428)
Q Consensus 39 ~~~i~~~~~~~ll~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~F~~w 118 (428)
.|.|++++|+..|. .. .. . ++++.-...+-..++. ..+..|++.+|+..
T Consensus 2 ~G~i~~~~~~~~l~-~~------g~-------~-----~~s~~e~~~l~~~~D~------------~~~G~I~~~EF~~~ 50 (54)
T PF13833_consen 2 DGKITREEFRRALS-KL------GI-------K-----DLSEEEVDRLFREFDT------------DGDGYISFDEFISM 50 (54)
T ss_dssp SSEEEHHHHHHHHH-HT------TS-------S-----SSCHHHHHHHHHHHTT------------SSSSSEEHHHHHHH
T ss_pred cCEECHHHHHHHHH-Hh------CC-------C-----CCCHHHHHHHHHhccc------------CCCCCCCHHHHHHH
Confidence 58899999998873 22 10 0 1444445666666666 56788999999887
Q ss_pred HH
Q 014223 119 TL 120 (428)
Q Consensus 119 i~ 120 (428)
+.
T Consensus 51 ~~ 52 (54)
T PF13833_consen 51 MQ 52 (54)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 13
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=25.16 E-value=3.3e+02 Score=22.10 Aligned_cols=34 Identities=12% Similarity=0.114 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHHhcCCcceeeeecCCCCCCccc-ccCHHHHHHHHHHHH
Q 014223 6 LLNTLLRVFATTFARAGLTLKLEFESGDADCKISG-FLRPIDVLMIFWMCW 55 (428)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~ll~~~~ 55 (428)
++..|.++|.. |.. -+-.| .|+.++|+.+|..+.
T Consensus 6 ~~~~l~~aF~~------------fD~----~dgdG~~I~~~eL~~ll~~~~ 40 (88)
T cd05027 6 AMVALIDVFHQ------------YSG----REGDKHKLKKSELKELINNEL 40 (88)
T ss_pred HHHHHHHHHHH------------hcc----cCCCcCEECHHHHHHHHHHHh
Confidence 45667777777 321 12256 599999999997644
No 14
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=23.38 E-value=1e+02 Score=29.13 Aligned_cols=97 Identities=19% Similarity=0.171 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHhcCCcceeeeecCCCCCCcccccCHHHHHHHHHHHHHHhhcCccccccCCcccccccchhHHHHHHHH
Q 014223 8 NTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVE 87 (428)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ll~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 87 (428)
.-.+|++..-..++-..-|++|--.--|-+..|.|+.++|..++-......... ....+..-+.
T Consensus 87 ~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~----------------~~e~~~~i~d 150 (187)
T KOG0034|consen 87 EEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDM----------------SDEQLEDIVD 150 (187)
T ss_pred HHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcc----------------hHHHHHHHHH
Confidence 334444444333333334566555455677788899999988877655222211 1122222222
Q ss_pred HhhhcCCCcccccccccCCCcccchhhhHHHHHhhCCChhHHH
Q 014223 88 SCAEVGSDVNFWDCNISDLEIQLPVGKFLTWTLTTVPSLTDCF 130 (428)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~i~~~~F~~wi~~~~P~l~~~l 130 (428)
-.+.- .| .+.+..|++++|++.+..+ |.+.+.+
T Consensus 151 ~t~~e------~D---~d~DG~IsfeEf~~~v~~~-P~~~~~m 183 (187)
T KOG0034|consen 151 KTFEE------AD---TDGDGKISFEEFCKVVEKQ-PDLLEKM 183 (187)
T ss_pred HHHHH------hC---CCCCCcCcHHHHHHHHHcC-ccHHHHc
Confidence 22222 11 1445779999999999866 7775543
No 15
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=23.17 E-value=2.3e+02 Score=26.93 Aligned_cols=82 Identities=15% Similarity=0.142 Sum_probs=51.6
Q ss_pred eecCCCCCCcccccCHHHHHHHHHHHHHHhhcCccccccCCcccccccchhHHHHHHHHHhhhcCCCcccccccccCCCc
Q 014223 29 FESGDADCKISGFLRPIDVLMIFWMCWTMWWDARTRKFSKGKEEIFQPDVNHLVLSAVESCAEVGSDVNFWDCNISDLEI 108 (428)
Q Consensus 29 ~~~~~~~~~~~~~i~~~~~~~ll~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 108 (428)
|.--| .+-.|.|+.+++..++.-++.|......+ .+. .--+.+-..+-+.++. ..+.
T Consensus 106 F~lyD--~dgdG~It~~Eml~iv~~i~~m~~~~~~~--~~~-------~~~~~~v~~if~k~D~------------n~Dg 162 (193)
T KOG0044|consen 106 FRLYD--LDGDGYITKEEMLKIVQAIYQMTGSKALP--EDE-------ETPEERVDKIFSKMDK------------NKDG 162 (193)
T ss_pred heeec--CCCCceEcHHHHHHHHHHHHHHcccccCC--ccc-------ccHHHHHHHHHHHcCC------------CCCC
Confidence 44433 44456899999999999999888774321 110 1111222222222233 3456
Q ss_pred ccchhhhHHHHHhhCCChhHHHHHHH
Q 014223 109 QLPVGKFLTWTLTTVPSLTDCFTQFV 134 (428)
Q Consensus 109 ~i~~~~F~~wi~~~~P~l~~~l~~~~ 134 (428)
.+|++.|..-+.+- |.++.++..+.
T Consensus 163 ~lT~eef~~~~~~d-~~i~~~l~~~~ 187 (193)
T KOG0044|consen 163 KLTLEEFIEGCKAD-PSILRALEQDP 187 (193)
T ss_pred cccHHHHHHHhhhC-HHHHHHhhhcc
Confidence 79999999988865 99988887655
No 16
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=22.65 E-value=2.1e+02 Score=19.39 Aligned_cols=19 Identities=11% Similarity=0.001 Sum_probs=14.2
Q ss_pred CCCcccccCHHHHHHHHHH
Q 014223 35 DCKISGFLRPIDVLMIFWM 53 (428)
Q Consensus 35 ~~~~~~~i~~~~~~~ll~~ 53 (428)
|-+..|.|+.++++.++..
T Consensus 10 d~~~~g~l~~~e~~~~l~~ 28 (63)
T cd00051 10 DKDGDGTISADELKAALKS 28 (63)
T ss_pred CCCCCCcCcHHHHHHHHHH
Confidence 4456678999999987754
No 17
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=21.64 E-value=4.4e+02 Score=21.37 Aligned_cols=32 Identities=9% Similarity=0.137 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHHhcCCcceeeeecCCCCCCcccccCHHHHHHHHH
Q 014223 6 LLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFW 52 (428)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ll~ 52 (428)
.+..|+.+|.. +... -+..|.|+.++|+.+|.
T Consensus 8 ~~~~~i~~F~~------------y~~~---~~~~g~Is~~EL~~~l~ 39 (88)
T cd05029 8 AIGLLVAIFHK------------YSGR---EGDKNTLSKKELKELIQ 39 (88)
T ss_pred HHHHHHHHHHH------------HHcc---CCCCCEECHHHHHHHHH
Confidence 35667777776 3332 23578899999999985
No 18
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=21.28 E-value=73 Score=19.86 Aligned_cols=18 Identities=11% Similarity=0.006 Sum_probs=14.5
Q ss_pred CCCCcccccCHHHHHHHH
Q 014223 34 ADCKISGFLRPIDVLMIF 51 (428)
Q Consensus 34 ~~~~~~~~i~~~~~~~ll 51 (428)
.|-+-.|.|+.+++++|+
T Consensus 8 ~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 8 FDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HTTTSSSEEEHHHHHHHH
T ss_pred HcCCCCCcCCHHHHHHHC
Confidence 466677889999999864
No 19
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=20.48 E-value=4.3e+02 Score=21.46 Aligned_cols=18 Identities=6% Similarity=0.200 Sum_probs=13.7
Q ss_pred CCCcccchhhhHHHHHhh
Q 014223 105 DLEIQLPVGKFLTWTLTT 122 (428)
Q Consensus 105 ~~~~~i~~~~F~~wi~~~ 122 (428)
..+..|+|++|...+...
T Consensus 65 n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 65 NKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred CCCCCCCHHHHHHHHHHH
Confidence 346679999999887643
No 20
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=20.32 E-value=4.6e+02 Score=21.08 Aligned_cols=32 Identities=13% Similarity=0.061 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHHHhcCCcceeeeecCCCCCCcccccCHHHHHHHHH
Q 014223 6 LLNTLLRVFATTFARAGLTLKLEFESGDADCKISGFLRPIDVLMIFW 52 (428)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ll~ 52 (428)
+++.|.++|-..+ +..+-.|.|+.++|+.+|.
T Consensus 6 ~i~~~~~~f~~y~---------------~~~~~~~~Is~~El~~ll~ 37 (88)
T cd05030 6 AIETIINVFHQYS---------------VRKGHPDTLYKKEFKQLVE 37 (88)
T ss_pred HHHHHHHHHHHHh---------------ccCCCcccCCHHHHHHHHH
Confidence 4677888887732 2333567899999999996
Done!