Query 014225
Match_columns 428
No_of_seqs 444 out of 3457
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 07:43:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014225.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014225hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3idv_A Protein disulfide-isome 99.9 4E-26 1.4E-30 211.9 18.7 202 47-329 18-219 (241)
2 1i5g_A Tryparedoxin II; electr 99.9 3.9E-23 1.3E-27 176.3 15.0 136 38-178 3-143 (144)
3 3eur_A Uncharacterized protein 99.9 1.8E-23 6.1E-28 178.1 12.6 120 200-330 5-130 (142)
4 3ewl_A Uncharacterized conserv 99.9 3.7E-23 1.3E-27 175.9 14.0 118 201-329 2-125 (142)
5 3s9f_A Tryparedoxin; thioredox 99.9 3.4E-23 1.2E-27 181.5 12.3 140 35-179 21-164 (165)
6 2lrn_A Thiol:disulfide interch 99.9 8.2E-23 2.8E-27 176.1 14.5 135 202-364 5-143 (152)
7 1i5g_A Tryparedoxin II; electr 99.9 5.5E-23 1.9E-27 175.4 13.2 127 202-337 3-133 (144)
8 3fw2_A Thiol-disulfide oxidore 99.9 1.2E-22 4.2E-27 174.5 15.1 134 201-362 6-148 (150)
9 3eur_A Uncharacterized protein 99.9 8.3E-23 2.9E-27 173.9 12.9 122 36-162 5-130 (142)
10 1o8x_A Tryparedoxin, TRYX, TXN 99.9 1.5E-22 5.1E-27 173.2 14.3 137 37-178 3-143 (146)
11 2f9s_A Thiol-disulfide oxidore 99.9 8.7E-23 3E-27 175.5 12.7 140 202-366 2-142 (151)
12 4g2e_A Peroxiredoxin; redox pr 99.9 6.6E-24 2.3E-28 184.5 5.5 137 202-359 6-155 (157)
13 3drn_A Peroxiredoxin, bacterio 99.9 1E-22 3.4E-27 177.6 12.8 140 202-363 4-150 (161)
14 3hcz_A Possible thiol-disulfid 99.9 1.4E-22 4.7E-27 173.0 12.8 138 201-362 6-146 (148)
15 1o73_A Tryparedoxin; electron 99.9 3.7E-22 1.3E-26 170.0 14.9 137 36-178 2-143 (144)
16 3s9f_A Tryparedoxin; thioredox 99.9 7.1E-23 2.4E-27 179.5 10.6 136 201-346 23-163 (165)
17 3eyt_A Uncharacterized protein 99.9 1.6E-22 5.4E-27 175.1 12.5 139 202-365 2-155 (158)
18 3lor_A Thiol-disulfide isomera 99.9 1.2E-22 4.1E-27 176.2 11.5 139 200-363 3-156 (160)
19 3u5r_E Uncharacterized protein 99.9 3E-22 1E-26 183.6 14.5 151 201-367 33-192 (218)
20 1a8l_A Protein disulfide oxido 99.9 2.3E-21 7.7E-26 178.2 20.5 188 58-330 19-208 (226)
21 4fo5_A Thioredoxin-like protei 99.9 2.3E-22 7.8E-27 171.4 12.8 119 201-330 8-130 (143)
22 3gl3_A Putative thiol:disulfid 99.9 3.9E-22 1.3E-26 171.4 13.9 138 202-363 5-143 (152)
23 3fkf_A Thiol-disulfide oxidore 99.9 3.6E-22 1.2E-26 170.4 13.2 134 201-362 6-146 (148)
24 3ewl_A Uncharacterized conserv 99.9 4.7E-22 1.6E-26 169.0 12.8 121 36-161 1-125 (142)
25 3gkn_A Bacterioferritin comigr 99.9 3.4E-22 1.2E-26 174.2 11.8 137 201-360 8-160 (163)
26 4gqc_A Thiol peroxidase, perox 99.9 1.4E-23 4.6E-28 183.9 2.8 141 202-363 7-161 (164)
27 1o8x_A Tryparedoxin, TRYX, TXN 99.9 7.8E-22 2.7E-26 168.7 13.4 125 202-336 4-132 (146)
28 2lrt_A Uncharacterized protein 99.9 1.2E-21 4.2E-26 169.0 14.6 118 201-331 10-131 (152)
29 2cvb_A Probable thiol-disulfid 99.9 1.2E-21 4.2E-26 174.9 14.3 147 201-366 8-163 (188)
30 1o73_A Tryparedoxin; electron 99.9 1.9E-21 6.4E-26 165.6 14.7 125 201-335 3-131 (144)
31 3or5_A Thiol:disulfide interch 99.9 1.5E-21 5.2E-26 169.9 14.0 140 201-366 9-155 (165)
32 3kcm_A Thioredoxin family prot 99.9 8E-22 2.7E-26 169.8 11.9 121 201-332 3-125 (154)
33 2lja_A Putative thiol-disulfid 99.9 1.6E-21 5.4E-26 167.6 13.5 139 202-364 5-145 (152)
34 1nm3_A Protein HI0572; hybrid, 99.9 3.7E-21 1.3E-25 179.0 16.7 117 37-162 4-140 (241)
35 4fo5_A Thioredoxin-like protei 99.9 3E-22 1E-26 170.7 8.2 119 37-162 8-130 (143)
36 2lrt_A Uncharacterized protein 99.9 2.5E-21 8.4E-26 167.1 13.0 120 36-161 9-129 (152)
37 2l5o_A Putative thioredoxin; s 99.9 2.3E-21 7.8E-26 166.7 12.8 142 201-367 3-146 (153)
38 3lwa_A Secreted thiol-disulfid 99.9 4.3E-21 1.5E-25 170.6 14.2 136 202-362 33-181 (183)
39 3raz_A Thioredoxin-related pro 99.9 3.6E-21 1.2E-25 165.5 13.1 136 204-365 3-143 (151)
40 3ixr_A Bacterioferritin comigr 99.9 1.2E-21 4.2E-26 173.9 9.4 136 203-361 28-177 (179)
41 3fw2_A Thiol-disulfide oxidore 99.8 6.2E-21 2.1E-25 163.9 13.1 121 37-162 6-133 (150)
42 3ha9_A Uncharacterized thiored 99.8 3.2E-21 1.1E-25 168.2 10.9 116 200-328 11-145 (165)
43 1jfu_A Thiol:disulfide interch 99.8 7.4E-21 2.5E-25 169.4 13.0 140 202-363 36-181 (186)
44 2ywi_A Hypothetical conserved 99.8 7.9E-21 2.7E-25 170.6 13.1 147 202-366 20-178 (196)
45 1n8j_A AHPC, alkyl hydroperoxi 99.8 3.8E-21 1.3E-25 171.9 10.3 141 201-362 2-156 (186)
46 3dwv_A Glutathione peroxidase- 99.8 2.8E-21 9.6E-26 172.8 9.2 138 202-363 22-184 (187)
47 2lrn_A Thiol:disulfide interch 99.8 8.8E-21 3E-25 163.3 11.9 120 37-162 4-126 (152)
48 3kh7_A Thiol:disulfide interch 99.8 1.3E-20 4.6E-25 166.7 13.1 117 201-331 31-150 (176)
49 2c0d_A Thioredoxin peroxidase 99.8 6.2E-21 2.1E-25 175.0 11.3 141 201-362 26-184 (221)
50 2ggt_A SCO1 protein homolog, m 99.8 1.9E-20 6.5E-25 162.9 13.7 138 205-363 2-162 (164)
51 1zzo_A RV1677; thioredoxin fol 99.8 9.7E-21 3.3E-25 158.8 11.2 113 203-327 2-115 (136)
52 3erw_A Sporulation thiol-disul 99.8 1.1E-20 3.6E-25 160.5 11.5 119 201-331 10-132 (145)
53 4evm_A Thioredoxin family prot 99.8 1.8E-20 6.1E-25 157.1 12.5 116 205-331 1-122 (138)
54 2b5x_A YKUV protein, TRXY; thi 99.8 1.4E-20 4.8E-25 160.3 12.0 136 202-363 3-146 (148)
55 1xvw_A Hypothetical protein RV 99.8 5.9E-21 2E-25 165.7 9.8 120 201-332 10-140 (160)
56 2h01_A 2-Cys peroxiredoxin; th 99.8 1.1E-20 3.9E-25 169.4 11.9 140 202-362 2-159 (192)
57 1psq_A Probable thiol peroxida 99.8 6.9E-21 2.4E-25 166.2 10.0 118 202-332 18-144 (163)
58 3ia1_A THIO-disulfide isomeras 99.8 2.4E-20 8.2E-25 160.6 13.2 135 201-364 6-146 (154)
59 1xzo_A BSSCO, hypothetical pro 99.8 1.1E-20 3.7E-25 166.2 11.0 141 201-362 8-172 (174)
60 2i81_A 2-Cys peroxiredoxin; st 99.8 1.4E-20 4.9E-25 171.8 11.5 140 201-361 22-179 (213)
61 3drn_A Peroxiredoxin, bacterio 99.8 3.1E-20 1E-24 161.7 13.1 116 38-161 4-126 (161)
62 2jsy_A Probable thiol peroxida 99.8 4.3E-21 1.5E-25 168.0 7.7 138 202-361 20-166 (167)
63 2v1m_A Glutathione peroxidase; 99.8 1.6E-20 5.4E-25 164.2 11.0 136 202-362 7-167 (169)
64 1lu4_A Soluble secreted antige 99.8 1.5E-20 5.1E-25 157.9 10.4 112 205-330 3-115 (136)
65 3fkf_A Thiol-disulfide oxidore 99.8 2.4E-20 8.3E-25 159.0 11.8 121 37-162 6-131 (148)
66 3apo_A DNAJ homolog subfamily 99.8 1.3E-20 4.6E-25 203.8 12.7 176 57-324 451-628 (780)
67 2ywm_A Glutaredoxin-like prote 99.8 1.7E-19 5.9E-24 166.1 18.3 175 59-326 19-199 (229)
68 2p5q_A Glutathione peroxidase 99.8 2E-20 6.8E-25 163.7 11.2 119 202-331 8-151 (170)
69 3hdc_A Thioredoxin family prot 99.8 1.3E-20 4.3E-25 163.5 9.8 117 202-332 17-134 (158)
70 2p31_A CL683, glutathione pero 99.8 6.9E-21 2.4E-25 169.2 8.2 120 201-331 24-164 (181)
71 3cmi_A Peroxiredoxin HYR1; thi 99.8 1.4E-20 5E-25 165.4 10.0 134 203-362 9-168 (171)
72 2pn8_A Peroxiredoxin-4; thiore 99.8 1.6E-20 5.5E-25 171.2 10.6 141 201-362 20-177 (211)
73 3p7x_A Probable thiol peroxida 99.8 7.7E-21 2.6E-25 166.5 8.1 116 202-331 22-146 (166)
74 2vup_A Glutathione peroxidase- 99.8 2.9E-20 9.8E-25 166.5 11.9 137 202-363 24-186 (190)
75 2bmx_A Alkyl hydroperoxidase C 99.8 1.7E-20 5.7E-25 168.8 10.4 140 202-362 6-170 (195)
76 3hcz_A Possible thiol-disulfid 99.8 8.2E-21 2.8E-25 161.9 7.7 121 37-162 6-128 (148)
77 3ztl_A Thioredoxin peroxidase; 99.8 2.5E-20 8.7E-25 171.2 11.3 122 200-332 40-178 (222)
78 1qmv_A Human thioredoxin perox 99.8 3.7E-20 1.3E-24 166.8 11.9 140 201-361 6-162 (197)
79 1q98_A Thiol peroxidase, TPX; 99.8 1.2E-20 4E-25 165.2 8.3 117 202-331 19-147 (165)
80 2f8a_A Glutathione peroxidase 99.8 7.6E-20 2.6E-24 166.3 13.8 120 202-332 22-191 (208)
81 2f9s_A Thiol-disulfide oxidore 99.8 3.8E-20 1.3E-24 158.9 11.1 117 38-161 2-119 (151)
82 2ls5_A Uncharacterized protein 99.7 6.7E-22 2.3E-26 171.5 0.0 119 202-331 9-132 (159)
83 2yzh_A Probable thiol peroxida 99.8 1.6E-20 5.4E-25 165.2 8.8 116 202-331 23-150 (171)
84 1we0_A Alkyl hydroperoxide red 99.8 2.8E-20 9.5E-25 166.1 10.5 141 202-362 3-157 (187)
85 3gl3_A Putative thiol:disulfid 99.8 7.9E-20 2.7E-24 156.9 12.7 117 37-161 4-121 (152)
86 2a4v_A Peroxiredoxin DOT5; yea 99.8 3E-20 1E-24 161.4 10.1 138 201-363 8-155 (159)
87 1uul_A Tryparedoxin peroxidase 99.8 7.2E-20 2.5E-24 165.6 13.0 140 201-361 7-164 (202)
88 2rli_A SCO2 protein homolog, m 99.8 1.5E-19 5.3E-24 158.3 14.4 137 207-364 7-166 (171)
89 3lor_A Thiol-disulfide isomera 99.8 2E-20 6.7E-25 162.1 8.3 121 36-161 3-136 (160)
90 1zof_A Alkyl hydroperoxide-red 99.8 5.6E-20 1.9E-24 165.7 11.5 141 202-362 3-161 (198)
91 2hyx_A Protein DIPZ; thioredox 99.8 6.6E-20 2.3E-24 179.1 12.8 120 201-331 52-182 (352)
92 3qpm_A Peroxiredoxin; oxidored 99.8 6.9E-20 2.4E-24 170.2 12.1 120 201-331 49-185 (240)
93 3kij_A Probable glutathione pe 99.8 5.3E-20 1.8E-24 163.3 10.8 123 199-332 11-154 (180)
94 3eyt_A Uncharacterized protein 99.8 3.5E-20 1.2E-24 160.3 9.4 119 38-161 2-133 (158)
95 4g2e_A Peroxiredoxin; redox pr 99.8 7.2E-21 2.5E-25 165.3 5.0 117 38-162 6-135 (157)
96 2gs3_A PHGPX, GPX-4, phospholi 99.8 3.9E-20 1.3E-24 165.0 9.6 120 202-332 25-170 (185)
97 1kng_A Thiol:disulfide interch 99.8 6.4E-20 2.2E-24 158.0 10.6 116 201-330 9-134 (156)
98 3zrd_A Thiol peroxidase; oxido 99.8 3.1E-20 1.1E-24 167.9 8.9 117 202-331 54-182 (200)
99 2obi_A PHGPX, GPX-4, phospholi 99.8 3.9E-20 1.3E-24 164.6 9.4 120 201-331 22-167 (183)
100 2lus_A Thioredoxion; CR-Trp16, 99.7 1.4E-21 4.9E-26 165.9 0.0 122 205-334 3-129 (143)
101 2hls_A Protein disulfide oxido 99.8 2.3E-18 7.8E-23 160.3 21.7 197 61-362 25-226 (243)
102 1zye_A Thioredoxin-dependent p 99.8 1.2E-19 4.2E-24 166.4 12.8 141 201-362 28-185 (220)
103 3kcm_A Thioredoxin family prot 99.8 9.9E-20 3.4E-24 156.6 11.4 119 36-161 2-122 (154)
104 2h30_A Thioredoxin, peptide me 99.8 3.2E-20 1.1E-24 161.4 8.4 116 203-330 17-138 (164)
105 1tp9_A Peroxiredoxin, PRX D (t 99.8 5E-20 1.7E-24 160.7 9.5 118 201-330 5-143 (162)
106 3u5r_E Uncharacterized protein 99.8 6E-20 2.1E-24 168.2 10.4 118 37-161 33-159 (218)
107 4hde_A SCO1/SENC family lipopr 99.8 1.3E-19 4.5E-24 159.4 12.0 144 198-361 4-169 (170)
108 2b7k_A SCO1 protein; metalloch 99.8 2.9E-19 9.8E-24 161.5 14.2 125 200-331 13-162 (200)
109 1xvq_A Thiol peroxidase; thior 99.8 5.3E-20 1.8E-24 162.6 9.1 116 202-331 20-146 (175)
110 2i3y_A Epididymal secretory gl 99.8 3.3E-19 1.1E-23 162.6 14.5 136 202-363 31-212 (215)
111 2lja_A Putative thiol-disulfid 99.8 1.1E-19 3.8E-24 155.9 10.7 117 38-161 5-124 (152)
112 3or5_A Thiol:disulfide interch 99.8 2.7E-19 9.4E-24 155.5 12.5 118 36-161 8-132 (165)
113 2wfc_A Peroxiredoxin 5, PRDX5; 99.8 2.3E-19 7.8E-24 157.4 11.7 117 202-331 5-140 (167)
114 3me7_A Putative uncharacterize 99.8 2.5E-19 8.5E-24 157.6 11.6 141 202-363 3-163 (170)
115 3kh7_A Thiol:disulfide interch 99.8 2.2E-19 7.5E-24 158.8 10.9 115 36-161 30-148 (176)
116 3erw_A Sporulation thiol-disul 99.8 2.4E-19 8.1E-24 152.1 10.5 118 36-161 9-130 (145)
117 3mng_A Peroxiredoxin-5, mitoch 99.8 2.1E-19 7.1E-24 158.4 10.5 123 198-332 13-155 (173)
118 1nm3_A Protein HI0572; hybrid, 99.8 1.6E-19 5.4E-24 167.9 10.2 121 201-332 4-142 (241)
119 3uma_A Hypothetical peroxiredo 99.8 6.8E-20 2.3E-24 163.2 7.3 120 201-332 27-166 (184)
120 2lus_A Thioredoxion; CR-Trp16, 99.7 5E-21 1.7E-25 162.5 0.0 124 41-168 3-131 (143)
121 3tjj_A Peroxiredoxin-4; thiore 99.8 2E-19 6.9E-24 168.2 10.6 120 201-331 63-199 (254)
122 3lwa_A Secreted thiol-disulfid 99.8 3.9E-19 1.3E-23 157.8 11.8 119 36-161 31-162 (183)
123 2pwj_A Mitochondrial peroxired 99.8 1.4E-19 4.8E-24 159.4 8.7 120 201-332 8-153 (171)
124 2r37_A Glutathione peroxidase 99.8 1.1E-18 3.7E-23 158.4 14.8 135 202-362 13-193 (207)
125 2l5o_A Putative thioredoxin; s 99.8 3.9E-19 1.3E-23 152.6 11.3 119 36-161 2-122 (153)
126 3uem_A Protein disulfide-isome 99.8 7.4E-19 2.5E-23 173.1 14.6 192 62-327 136-336 (361)
127 3ha9_A Uncharacterized thiored 99.8 2E-19 6.8E-24 156.8 9.4 114 37-160 12-145 (165)
128 3hdc_A Thioredoxin family prot 99.8 4.5E-19 1.5E-23 153.6 10.9 115 37-161 16-131 (158)
129 2b1k_A Thiol:disulfide interch 99.8 4.7E-19 1.6E-23 154.9 11.0 116 201-331 23-143 (168)
130 3me7_A Putative uncharacterize 99.8 6.3E-19 2.2E-23 155.0 11.7 121 38-161 3-142 (170)
131 3ixr_A Bacterioferritin comigr 99.8 2E-19 6.8E-24 159.6 8.3 121 33-161 22-156 (179)
132 4gqc_A Thiol peroxidase, perox 99.8 4.6E-20 1.6E-24 161.4 3.9 117 38-162 7-137 (164)
133 3dwv_A Glutathione peroxidase- 99.8 1.1E-19 3.7E-24 162.4 6.4 119 38-161 22-164 (187)
134 1jfu_A Thiol:disulfide interch 99.8 5.2E-19 1.8E-23 157.4 10.8 118 37-161 35-159 (186)
135 3kij_A Probable glutathione pe 99.8 6.5E-19 2.2E-23 156.2 11.3 120 35-161 11-151 (180)
136 3apo_A DNAJ homolog subfamily 99.8 1.2E-18 4E-23 188.6 15.6 205 61-363 563-768 (780)
137 2ggt_A SCO1 protein homolog, m 99.8 1.9E-18 6.3E-23 150.2 13.8 117 41-161 2-142 (164)
138 3gkn_A Bacterioferritin comigr 99.8 4.3E-19 1.5E-23 154.5 9.7 118 37-162 8-141 (163)
139 1xzo_A BSSCO, hypothetical pro 99.8 5.3E-19 1.8E-23 155.3 10.2 122 37-161 8-151 (174)
140 2cvb_A Probable thiol-disulfid 99.8 6E-19 2E-23 157.4 10.6 117 37-161 8-132 (188)
141 2v2g_A Peroxiredoxin 6; oxidor 99.8 6.4E-19 2.2E-23 162.6 11.1 140 201-362 4-165 (233)
142 3keb_A Probable thiol peroxida 99.8 3.4E-19 1.2E-23 162.3 9.0 136 202-362 24-176 (224)
143 3raz_A Thioredoxin-related pro 99.8 1.3E-18 4.4E-23 149.5 12.1 114 41-161 4-121 (151)
144 2b5e_A Protein disulfide-isome 99.8 1.7E-18 5.8E-23 178.1 15.1 66 60-151 30-95 (504)
145 4hde_A SCO1/SENC family lipopr 99.8 1.8E-18 6E-23 152.2 13.0 125 34-161 4-149 (170)
146 2p31_A CL683, glutathione pero 99.8 2.4E-19 8.1E-24 159.3 6.8 119 37-161 24-162 (181)
147 1zzo_A RV1677; thioredoxin fol 99.8 1.5E-18 5.1E-23 145.3 11.3 112 39-159 2-115 (136)
148 1xvw_A Hypothetical protein RV 99.8 5.1E-19 1.8E-23 153.4 8.5 120 37-162 10-138 (160)
149 1lu4_A Soluble secreted antige 99.8 1.2E-18 4.1E-23 146.2 10.5 111 40-159 2-113 (136)
150 2k6v_A Putative cytochrome C o 99.8 3.8E-19 1.3E-23 155.9 7.6 121 201-332 11-155 (172)
151 2f8a_A Glutathione peroxidase 99.8 3.1E-18 1.1E-22 155.6 13.9 76 39-116 23-107 (208)
152 2rli_A SCO2 protein homolog, m 99.8 4.6E-18 1.6E-22 148.8 14.5 115 43-161 7-145 (171)
153 1we0_A Alkyl hydroperoxide red 99.8 1.1E-18 3.8E-23 155.6 10.7 118 37-162 2-135 (187)
154 4evm_A Thioredoxin family prot 99.8 1.1E-18 3.6E-23 146.2 9.9 113 41-161 1-120 (138)
155 1n8j_A AHPC, alkyl hydroperoxi 99.8 7.1E-19 2.4E-23 157.0 9.2 118 37-162 2-134 (186)
156 3cmi_A Peroxiredoxin HYR1; thi 99.8 4.1E-19 1.4E-23 156.0 7.5 117 39-161 9-149 (171)
157 2v1m_A Glutathione peroxidase; 99.8 9.2E-19 3.1E-23 152.9 9.4 119 38-161 7-148 (169)
158 2p5q_A Glutathione peroxidase 99.8 1.4E-18 4.7E-23 151.9 10.3 120 37-161 7-149 (170)
159 2c0d_A Thioredoxin peroxidase 99.8 1.1E-18 3.8E-23 160.0 10.1 117 37-162 26-162 (221)
160 3ia1_A THIO-disulfide isomeras 99.8 2.9E-18 9.9E-23 147.5 11.9 116 37-161 6-125 (154)
161 2ywi_A Hypothetical conserved 99.8 6.8E-19 2.3E-23 157.9 8.2 118 37-161 19-146 (196)
162 1prx_A HORF6; peroxiredoxin, h 99.8 1.8E-18 6E-23 159.0 11.1 140 201-362 6-169 (224)
163 3sbc_A Peroxiredoxin TSA1; alp 99.8 3.2E-18 1.1E-22 154.7 12.5 122 198-330 21-159 (216)
164 2obi_A PHGPX, GPX-4, phospholi 99.8 2.2E-18 7.4E-23 153.2 11.3 120 37-161 22-165 (183)
165 2wfc_A Peroxiredoxin 5, PRDX5; 99.8 1.2E-18 4E-23 152.9 9.3 116 38-162 5-139 (167)
166 2gs3_A PHGPX, GPX-4, phospholi 99.8 1.5E-18 5.3E-23 154.5 10.3 120 37-161 24-167 (185)
167 2b5x_A YKUV protein, TRXY; thi 99.8 1.1E-18 3.9E-23 148.4 8.7 116 38-161 3-126 (148)
168 2h01_A 2-Cys peroxiredoxin; th 99.8 1.8E-18 6.1E-23 155.0 9.7 116 38-162 2-137 (192)
169 1q98_A Thiol peroxidase, TPX; 99.8 1.7E-18 5.9E-23 151.3 9.4 118 37-163 18-147 (165)
170 1zof_A Alkyl hydroperoxide-red 99.8 1.8E-18 6.1E-23 155.8 9.4 117 38-162 3-139 (198)
171 2bmx_A Alkyl hydroperoxidase C 99.8 2E-18 6.7E-23 155.2 9.7 117 38-162 6-148 (195)
172 1xcc_A 1-Cys peroxiredoxin; un 99.8 2.1E-18 7.3E-23 158.0 10.0 139 201-361 4-165 (220)
173 1psq_A Probable thiol peroxida 99.8 2E-18 7E-23 150.5 9.4 116 37-162 17-142 (163)
174 2b7k_A SCO1 protein; metalloch 99.8 6.1E-18 2.1E-22 152.7 12.8 122 36-161 13-160 (200)
175 2vup_A Glutathione peroxidase- 99.8 1E-18 3.5E-23 156.4 7.6 119 38-161 24-166 (190)
176 3tue_A Tryparedoxin peroxidase 99.7 3.4E-18 1.2E-22 154.9 11.0 119 201-330 27-163 (219)
177 2i81_A 2-Cys peroxiredoxin; st 99.7 2.3E-18 7.9E-23 157.1 9.9 117 37-162 22-158 (213)
178 2ls5_A Uncharacterized protein 99.6 8.4E-20 2.9E-24 158.2 0.0 117 38-161 9-130 (159)
179 3zrd_A Thiol peroxidase; oxido 99.7 2.2E-18 7.4E-23 155.7 9.2 118 37-163 53-182 (200)
180 3ztl_A Thioredoxin peroxidase; 99.7 2.2E-18 7.6E-23 158.2 9.4 116 37-162 41-176 (222)
181 2pn8_A Peroxiredoxin-4; thiore 99.7 2.1E-18 7.2E-23 157.1 9.1 117 37-162 20-155 (211)
182 1uul_A Tryparedoxin peroxidase 99.7 3.4E-18 1.2E-22 154.5 9.9 117 37-162 7-143 (202)
183 1qmv_A Human thioredoxin perox 99.7 4E-18 1.4E-22 153.5 9.9 116 37-161 6-140 (197)
184 2i3y_A Epididymal secretory gl 99.7 1.9E-17 6.4E-22 151.0 14.4 76 38-116 31-115 (215)
185 3p7x_A Probable thiol peroxida 99.7 2.1E-18 7.3E-23 150.8 7.6 116 37-163 21-146 (166)
186 2a4v_A Peroxiredoxin DOT5; yea 99.7 3.1E-18 1E-22 148.6 8.5 116 37-162 8-133 (159)
187 3f8u_A Protein disulfide-isome 99.7 9.6E-17 3.3E-21 164.0 20.9 92 225-363 369-462 (481)
188 3a2v_A Probable peroxiredoxin; 99.7 4.1E-18 1.4E-22 158.4 9.6 139 201-361 6-161 (249)
189 2jsy_A Probable thiol peroxida 99.7 2.7E-18 9.3E-23 150.1 8.0 117 37-162 19-144 (167)
190 2r37_A Glutathione peroxidase 99.7 4.8E-17 1.6E-21 147.5 16.3 76 38-116 13-97 (207)
191 3qpm_A Peroxiredoxin; oxidored 99.7 8E-18 2.7E-22 156.2 10.3 118 37-162 49-184 (240)
192 1tp9_A Peroxiredoxin, PRX D (t 99.7 8E-18 2.8E-22 146.7 9.6 117 37-162 5-143 (162)
193 1zye_A Thioredoxin-dependent p 99.7 9.6E-18 3.3E-22 153.7 10.5 117 37-162 28-163 (220)
194 2b1k_A Thiol:disulfide interch 99.7 5.6E-18 1.9E-22 148.0 8.5 114 37-161 23-141 (168)
195 2yzh_A Probable thiol peroxida 99.7 7.5E-18 2.6E-22 148.0 9.1 115 37-162 22-149 (171)
196 2h30_A Thioredoxin, peptide me 99.7 4E-18 1.4E-22 148.0 6.9 110 46-161 23-137 (164)
197 1kng_A Thiol:disulfide interch 99.7 6.7E-18 2.3E-22 145.3 7.7 115 37-161 9-133 (156)
198 1xvq_A Thiol peroxidase; thior 99.7 1.4E-17 5E-22 146.9 9.2 115 37-162 19-145 (175)
199 3uma_A Hypothetical peroxiredo 99.7 8.2E-18 2.8E-22 149.7 6.4 119 36-163 26-165 (184)
200 2k6v_A Putative cytochrome C o 99.7 2.3E-17 7.9E-22 144.4 9.2 122 36-162 10-153 (172)
201 3mng_A Peroxiredoxin-5, mitoch 99.7 2.7E-17 9.3E-22 144.8 9.3 118 37-163 16-154 (173)
202 2hyx_A Protein DIPZ; thioredox 99.7 2.3E-17 7.9E-22 161.1 9.5 118 37-161 52-180 (352)
203 3tjj_A Peroxiredoxin-4; thiore 99.7 2.2E-17 7.6E-22 154.4 8.9 118 37-162 63-198 (254)
204 4eo3_A Bacterioferritin comigr 99.7 5E-17 1.7E-21 157.2 10.4 132 204-362 2-139 (322)
205 2pwj_A Mitochondrial peroxired 99.7 2.8E-17 9.6E-22 144.6 5.7 119 35-162 6-151 (171)
206 2v2g_A Peroxiredoxin 6; oxidor 99.7 7.1E-17 2.4E-21 148.9 8.6 116 37-162 4-143 (233)
207 1prx_A HORF6; peroxiredoxin, h 99.7 1.1E-16 3.8E-21 146.9 9.8 116 37-162 6-147 (224)
208 1xcc_A 1-Cys peroxiredoxin; un 99.7 1.3E-16 4.6E-21 146.0 8.1 116 37-162 4-144 (220)
209 3keb_A Probable thiol peroxida 99.7 2.4E-16 8.4E-21 143.5 9.5 116 37-164 23-155 (224)
210 1v5n_A PDI-like hypothetical p 99.6 9.7E-17 3.3E-21 124.1 4.2 80 339-422 1-81 (89)
211 3q6o_A Sulfhydryl oxidase 1; p 99.6 5.9E-15 2E-19 137.1 16.8 70 60-151 29-98 (244)
212 3a2v_A Probable peroxiredoxin; 99.6 3.8E-16 1.3E-20 145.1 8.3 116 37-162 6-140 (249)
213 2l57_A Uncharacterized protein 99.6 1.1E-15 3.7E-20 127.0 9.6 113 205-363 5-118 (126)
214 3zzx_A Thioredoxin; oxidoreduc 99.6 1.8E-15 6.3E-20 121.8 10.6 74 223-331 17-90 (105)
215 3hxs_A Thioredoxin, TRXP; elec 99.6 1.7E-15 5.8E-20 128.3 10.8 84 212-329 38-121 (141)
216 3ul3_B Thioredoxin, thioredoxi 99.6 7.1E-15 2.4E-19 122.5 11.6 93 203-331 21-113 (128)
217 3sbc_A Peroxiredoxin TSA1; alp 99.6 2.2E-15 7.4E-20 136.2 8.7 120 34-161 21-158 (216)
218 2fwh_A Thiol:disulfide interch 99.6 8.8E-16 3E-20 129.2 5.5 96 201-327 5-105 (134)
219 4f82_A Thioredoxin reductase; 99.6 1.9E-15 6.5E-20 132.4 7.8 119 202-331 12-156 (176)
220 3idv_A Protein disulfide-isome 99.6 2.1E-15 7.3E-20 139.3 7.8 139 212-401 19-169 (241)
221 3p2a_A Thioredoxin 2, putative 99.6 1.6E-14 5.5E-19 123.4 11.6 115 203-366 32-147 (148)
222 3t58_A Sulfhydryl oxidase 1; o 99.6 3.3E-14 1.1E-18 145.8 15.9 84 46-151 14-98 (519)
223 2av4_A Thioredoxin-like protei 99.6 1.3E-14 4.3E-19 123.4 10.5 69 225-327 40-108 (160)
224 2ju5_A Thioredoxin disulfide i 99.5 6.3E-15 2.2E-19 127.1 7.8 113 214-362 36-152 (154)
225 3fk8_A Disulphide isomerase; A 99.5 3.6E-14 1.2E-18 118.8 11.7 79 224-332 27-110 (133)
226 2xhf_A Peroxiredoxin 5; oxidor 99.5 8.3E-15 2.8E-19 128.1 7.3 118 201-330 15-149 (171)
227 3hxs_A Thioredoxin, TRXP; elec 99.5 1.6E-14 5.6E-19 122.1 8.8 84 46-159 36-119 (141)
228 4eo3_A Bacterioferritin comigr 99.5 4.1E-14 1.4E-18 136.7 11.6 110 40-161 2-117 (322)
229 2l5l_A Thioredoxin; structural 99.5 6.8E-14 2.3E-18 117.8 11.6 93 225-365 37-129 (136)
230 3f3q_A Thioredoxin-1; His TAG, 99.5 5E-14 1.7E-18 113.9 9.9 72 224-330 22-93 (109)
231 1xiy_A Peroxiredoxin, pfaop; a 99.5 2.4E-14 8.2E-19 126.7 8.1 117 202-330 3-151 (182)
232 3d22_A TRXH4, thioredoxin H-ty 99.5 4.1E-14 1.4E-18 119.4 9.2 95 223-367 43-137 (139)
233 3tue_A Tryparedoxin peroxidase 99.5 3.1E-14 1.1E-18 128.9 8.6 117 37-161 27-162 (219)
234 3qfa_C Thioredoxin; protein-pr 99.5 4.2E-14 1.4E-18 115.8 8.1 73 223-330 28-100 (116)
235 2l57_A Uncharacterized protein 99.5 5.6E-14 1.9E-18 116.5 8.8 92 42-161 6-98 (126)
236 2voc_A Thioredoxin; electron t 99.5 2.2E-13 7.6E-18 110.5 11.7 72 225-330 16-87 (112)
237 3f9u_A Putative exported cytoc 99.5 3.9E-14 1.3E-18 124.2 7.5 104 218-331 39-148 (172)
238 1z6n_A Hypothetical protein PA 99.5 3E-14 1E-18 124.5 6.5 78 220-331 48-128 (167)
239 2fwh_A Thiol:disulfide interch 99.5 1.3E-14 4.4E-19 122.0 4.0 96 37-159 5-105 (134)
240 2pu9_C TRX-F, thioredoxin F-ty 99.5 1.4E-13 4.7E-18 111.4 10.0 75 222-330 20-94 (111)
241 2trx_A Thioredoxin; electron t 99.5 1.8E-13 6.3E-18 109.8 10.6 72 225-330 19-90 (108)
242 3d6i_A Monothiol glutaredoxin- 99.5 1.4E-13 4.9E-18 111.4 10.1 73 225-330 20-92 (112)
243 2kuc_A Putative disulphide-iso 99.5 1.2E-13 4.2E-18 114.9 9.7 101 218-363 19-122 (130)
244 3zzx_A Thioredoxin; oxidoreduc 99.5 8.6E-14 2.9E-18 112.0 8.3 72 58-161 17-88 (105)
245 3ul3_B Thioredoxin, thioredoxi 99.5 1.3E-13 4.3E-18 114.8 9.7 90 40-161 22-111 (128)
246 3tco_A Thioredoxin (TRXA-1); d 99.5 1.3E-13 4.3E-18 110.7 9.3 73 224-330 19-91 (109)
247 2qsi_A Putative hydrogenase ex 99.5 1.1E-13 3.7E-18 115.7 9.0 71 227-331 34-106 (137)
248 3gix_A Thioredoxin-like protei 99.5 1.4E-13 4.8E-18 118.0 10.0 69 225-327 22-90 (149)
249 4f82_A Thioredoxin reductase; 99.5 7.3E-14 2.5E-18 122.3 7.9 118 37-163 11-156 (176)
250 1t00_A Thioredoxin, TRX; redox 99.5 2.7E-13 9.1E-18 109.7 10.7 72 225-330 22-93 (112)
251 2qgv_A Hydrogenase-1 operon pr 99.5 3.6E-14 1.2E-18 119.0 5.2 92 225-363 33-126 (140)
252 2o8v_B Thioredoxin 1; disulfid 99.5 2.3E-13 7.8E-18 113.5 10.1 72 225-330 39-110 (128)
253 4euy_A Uncharacterized protein 99.5 1.4E-13 4.7E-18 110.4 8.4 71 225-330 17-87 (105)
254 1sen_A Thioredoxin-like protei 99.5 1E-14 3.5E-19 127.2 1.7 111 218-364 38-150 (164)
255 3die_A Thioredoxin, TRX; elect 99.5 2.8E-13 9.7E-18 108.1 10.1 72 225-330 18-89 (106)
256 1dby_A Chloroplast thioredoxin 99.5 3.3E-13 1.1E-17 108.1 10.5 72 225-330 18-89 (107)
257 1xfl_A Thioredoxin H1; AT3G510 99.5 2.8E-13 9.6E-18 112.2 10.3 71 225-330 37-107 (124)
258 1x5d_A Protein disulfide-isome 99.5 5.4E-13 1.8E-17 111.3 12.0 95 225-363 24-118 (133)
259 3ph9_A Anterior gradient prote 99.5 6.1E-14 2.1E-18 120.3 6.2 104 224-364 42-147 (151)
260 1nsw_A Thioredoxin, TRX; therm 99.5 1.7E-13 5.8E-18 109.4 8.4 72 225-330 16-87 (105)
261 2dml_A Protein disulfide-isome 99.5 3.8E-13 1.3E-17 111.9 10.9 94 225-365 34-127 (130)
262 1w4v_A Thioredoxin, mitochondr 99.4 3.1E-13 1.1E-17 111.0 10.1 72 225-330 30-101 (119)
263 1gh2_A Thioredoxin-like protei 99.4 4.4E-13 1.5E-17 107.6 10.7 71 225-330 20-90 (107)
264 2ju5_A Thioredoxin disulfide i 99.4 2.6E-14 8.8E-19 123.3 3.6 104 37-161 25-132 (154)
265 3gnj_A Thioredoxin domain prot 99.4 4.5E-13 1.5E-17 108.0 10.7 90 225-362 21-110 (111)
266 2dj1_A Protein disulfide-isome 99.4 4.4E-13 1.5E-17 113.0 11.1 105 212-363 21-125 (140)
267 1thx_A Thioredoxin, thioredoxi 99.4 5.8E-13 2E-17 107.9 11.0 90 225-362 24-113 (115)
268 1qgv_A Spliceosomal protein U5 99.4 3.3E-13 1.1E-17 114.7 9.9 71 225-329 22-92 (142)
269 3cxg_A Putative thioredoxin; m 99.4 1.4E-13 4.8E-18 115.6 7.5 94 219-362 33-129 (133)
270 3m9j_A Thioredoxin; oxidoreduc 99.4 3.4E-13 1.2E-17 107.5 9.2 73 223-330 17-89 (105)
271 1ep7_A Thioredoxin CH1, H-type 99.4 4.7E-13 1.6E-17 108.1 10.0 71 226-330 24-94 (112)
272 2ppt_A Thioredoxin-2; thiredox 99.4 6.1E-13 2.1E-17 114.8 11.3 90 225-362 63-152 (155)
273 1x5e_A Thioredoxin domain cont 99.4 7.3E-13 2.5E-17 109.7 11.3 69 227-328 23-91 (126)
274 3h79_A Thioredoxin-like protei 99.4 1.6E-12 5.4E-17 107.9 13.3 86 212-326 19-105 (127)
275 1r26_A Thioredoxin; redox-acti 99.4 6.1E-13 2.1E-17 110.4 10.5 88 225-362 36-123 (125)
276 2dj3_A Protein disulfide-isome 99.4 3.8E-13 1.3E-17 112.4 9.3 83 212-326 11-94 (133)
277 2wz9_A Glutaredoxin-3; protein 99.4 5.5E-13 1.9E-17 114.6 10.5 90 225-364 31-120 (153)
278 1sji_A Calsequestrin 2, calseq 99.4 2.2E-12 7.5E-17 126.3 15.4 162 60-322 27-198 (350)
279 3hz4_A Thioredoxin; NYSGXRC, P 99.4 9.6E-13 3.3E-17 111.3 11.1 72 225-330 23-94 (140)
280 3ed3_A Protein disulfide-isome 99.4 1.7E-12 5.8E-17 124.2 14.0 67 60-151 34-100 (298)
281 2vlu_A Thioredoxin, thioredoxi 99.4 8.8E-13 3E-17 108.4 10.5 88 225-362 33-120 (122)
282 3aps_A DNAJ homolog subfamily 99.4 4.1E-13 1.4E-17 110.4 8.3 97 225-365 20-116 (122)
283 3apq_A DNAJ homolog subfamily 99.4 3.5E-13 1.2E-17 122.2 8.5 113 204-365 92-205 (210)
284 2i4a_A Thioredoxin; acidophIle 99.4 1.4E-12 4.7E-17 104.2 11.1 72 225-330 19-90 (107)
285 1xwb_A Thioredoxin; dimerizati 99.4 1E-12 3.6E-17 104.8 10.2 73 224-330 18-90 (106)
286 1z6n_A Hypothetical protein PA 99.4 2.2E-13 7.6E-18 118.9 6.8 77 54-161 47-126 (167)
287 2f51_A Thioredoxin; electron t 99.4 7E-13 2.4E-17 108.8 9.3 72 225-330 22-96 (118)
288 1faa_A Thioredoxin F; electron 99.4 6.2E-13 2.1E-17 109.7 8.8 74 223-330 34-107 (124)
289 1fb6_A Thioredoxin M; electron 99.4 1.4E-12 4.7E-17 103.9 10.5 72 225-330 17-88 (105)
290 2av4_A Thioredoxin-like protei 99.4 3.5E-13 1.2E-17 114.6 7.1 69 60-159 40-108 (160)
291 2xc2_A Thioredoxinn; oxidoredu 99.4 5.3E-13 1.8E-17 109.0 8.0 73 222-330 29-101 (117)
292 2j23_A Thioredoxin; immune pro 99.4 5.8E-13 2E-17 109.7 8.1 73 225-330 32-104 (121)
293 2e0q_A Thioredoxin; electron t 99.4 2.4E-12 8.2E-17 102.0 11.5 71 225-330 15-85 (104)
294 2yzu_A Thioredoxin; redox prot 99.4 1.4E-12 4.7E-17 104.4 9.8 72 225-330 17-88 (109)
295 1ti3_A Thioredoxin H, PTTRXH1; 99.4 1.8E-12 6.3E-17 104.7 10.6 72 224-330 24-95 (113)
296 2vim_A Thioredoxin, TRX; thior 99.4 1.3E-12 4.5E-17 103.8 9.5 72 224-330 17-88 (104)
297 2lst_A Thioredoxin; structural 99.1 3.5E-14 1.2E-18 118.3 0.0 102 218-364 11-118 (130)
298 3fk8_A Disulphide isomerase; A 99.4 9.8E-13 3.3E-17 110.0 8.9 78 59-163 27-109 (133)
299 2oe3_A Thioredoxin-3; electron 99.4 1.7E-12 5.8E-17 105.8 9.8 71 225-330 29-99 (114)
300 3p2a_A Thioredoxin 2, putative 99.4 7.9E-13 2.7E-17 112.8 7.9 92 39-161 32-124 (148)
301 1syr_A Thioredoxin; SGPP, stru 99.4 1.5E-12 5.2E-17 105.5 9.0 71 225-330 25-95 (112)
302 2vm1_A Thioredoxin, thioredoxi 99.4 2.6E-12 9E-17 104.6 10.2 88 225-362 27-114 (118)
303 3uvt_A Thioredoxin domain-cont 99.4 2.3E-12 7.7E-17 103.7 9.6 74 226-330 21-94 (111)
304 1v98_A Thioredoxin; oxidoreduc 99.4 5.4E-12 1.9E-16 106.5 12.2 89 226-362 50-138 (140)
305 3qou_A Protein YBBN; thioredox 99.4 1.4E-12 4.9E-17 123.7 9.3 74 224-331 24-97 (287)
306 2dj3_A Protein disulfide-isome 99.4 1.2E-12 4.1E-17 109.3 7.7 81 46-151 9-90 (133)
307 1qgv_A Spliceosomal protein U5 99.4 1.6E-12 5.3E-17 110.5 8.4 71 60-161 22-92 (142)
308 2i1u_A Thioredoxin, TRX, MPT46 99.3 1.6E-12 5.3E-17 106.6 7.7 72 225-330 29-100 (121)
309 3gix_A Thioredoxin-like protei 99.3 2.8E-12 9.7E-17 109.8 9.2 70 60-160 22-91 (149)
310 3dxb_A Thioredoxin N-terminall 99.3 2.9E-12 9.8E-17 117.2 9.8 92 225-364 29-120 (222)
311 2djj_A PDI, protein disulfide- 99.3 2.2E-12 7.4E-17 105.8 8.0 83 212-326 11-94 (121)
312 3qfa_C Thioredoxin; protein-pr 99.3 1.4E-12 4.9E-17 106.5 6.5 72 58-161 28-99 (116)
313 3evi_A Phosducin-like protein 99.3 2.6E-12 8.9E-17 105.4 8.0 69 226-332 23-91 (118)
314 2l6c_A Thioredoxin; oxidoreduc 99.3 3.1E-12 1.1E-16 103.4 8.3 71 225-330 18-88 (110)
315 2l5l_A Thioredoxin; structural 99.3 4.7E-12 1.6E-16 106.4 9.3 70 60-159 37-106 (136)
316 2dj1_A Protein disulfide-isome 99.3 3.2E-12 1.1E-16 107.6 8.4 85 46-158 19-103 (140)
317 3us3_A Calsequestrin-1; calciu 99.3 1.8E-11 6.3E-16 120.5 15.0 163 60-322 29-200 (367)
318 2voc_A Thioredoxin; electron t 99.3 2.7E-12 9.4E-17 104.0 7.5 71 60-161 16-86 (112)
319 3h79_A Thioredoxin-like protei 99.3 6.3E-12 2.2E-16 104.2 9.6 82 46-151 17-101 (127)
320 3f3q_A Thioredoxin-1; His TAG, 99.3 3.8E-12 1.3E-16 102.7 7.9 70 60-161 23-92 (109)
321 2r2j_A Thioredoxin domain-cont 99.3 2.1E-11 7.1E-16 120.8 14.8 73 60-160 21-96 (382)
322 1oaz_A Thioredoxin 1; immune s 99.3 7.6E-13 2.6E-17 109.5 3.7 72 225-330 20-105 (123)
323 3tco_A Thioredoxin (TRXA-1); d 99.3 2.2E-12 7.4E-17 103.4 6.2 82 49-161 9-90 (109)
324 3q6o_A Sulfhydryl oxidase 1; p 99.3 1.4E-11 4.9E-16 114.1 12.7 96 225-364 29-129 (244)
325 1nsw_A Thioredoxin, TRX; therm 99.3 2.4E-12 8.1E-17 102.7 6.3 71 60-161 16-86 (105)
326 2qsi_A Putative hydrogenase ex 99.3 2.9E-12 9.9E-17 107.0 7.0 69 62-161 34-104 (137)
327 3die_A Thioredoxin, TRX; elect 99.3 3.7E-12 1.3E-16 101.5 7.3 71 60-161 18-88 (106)
328 4euy_A Uncharacterized protein 99.3 3.4E-12 1.2E-16 102.1 7.0 70 60-161 17-86 (105)
329 2dml_A Protein disulfide-isome 99.3 1.1E-11 3.9E-16 102.8 10.4 68 60-157 34-101 (130)
330 3f9u_A Putative exported cytoc 99.3 9.4E-13 3.2E-17 115.3 3.9 102 54-161 40-146 (172)
331 1fo5_A Thioredoxin; disulfide 99.3 3.7E-12 1.3E-16 97.3 6.9 64 227-326 3-66 (85)
332 2dj0_A Thioredoxin-related tra 99.3 3E-12 1E-16 107.7 6.6 77 223-332 23-105 (137)
333 3ira_A Conserved protein; meth 99.3 1.3E-11 4.5E-16 107.9 10.6 88 218-330 31-121 (173)
334 3d6i_A Monothiol glutaredoxin- 99.3 5.5E-12 1.9E-16 101.9 7.6 72 60-161 20-91 (112)
335 1sen_A Thioredoxin-like protei 99.3 5.3E-13 1.8E-17 116.3 1.6 86 46-161 32-119 (164)
336 1zma_A Bacterocin transport ac 99.3 1.3E-11 4.5E-16 100.9 9.8 77 225-331 28-104 (118)
337 1x5e_A Thioredoxin domain cont 99.3 6.8E-12 2.3E-16 103.7 8.1 66 63-158 24-89 (126)
338 1nho_A Probable thioredoxin; b 99.3 3.9E-12 1.3E-16 97.3 6.1 63 228-326 3-65 (85)
339 1t00_A Thioredoxin, TRX; redox 99.3 9E-12 3.1E-16 100.6 8.3 71 60-161 22-92 (112)
340 2trx_A Thioredoxin; electron t 99.3 8.6E-12 2.9E-16 99.9 8.2 71 60-161 19-89 (108)
341 2kuc_A Putative disulphide-iso 99.3 2.6E-12 8.8E-17 106.8 5.2 81 53-161 19-102 (130)
342 2dj0_A Thioredoxin-related tra 99.3 5.2E-12 1.8E-16 106.2 7.1 75 57-161 22-102 (137)
343 2dbc_A PDCL2, unnamed protein 99.3 8.8E-12 3E-16 104.8 8.3 68 225-330 29-96 (135)
344 2pu9_C TRX-F, thioredoxin F-ty 99.3 8.6E-12 2.9E-16 100.6 8.0 72 59-161 22-93 (111)
345 3hz4_A Thioredoxin; NYSGXRC, P 99.3 7.1E-12 2.4E-16 105.9 7.6 71 60-161 23-93 (140)
346 1xfl_A Thioredoxin H1; AT3G510 99.3 1.2E-11 4E-16 102.4 8.7 71 59-161 36-106 (124)
347 3emx_A Thioredoxin; structural 99.3 3.7E-12 1.3E-16 107.0 5.7 77 228-331 33-109 (135)
348 1dby_A Chloroplast thioredoxin 99.3 1.3E-11 4.4E-16 98.7 8.7 71 60-161 18-88 (107)
349 1wou_A Thioredoxin -related pr 99.3 7.8E-12 2.7E-16 103.2 7.4 80 224-329 22-108 (123)
350 1w4v_A Thioredoxin, mitochondr 99.3 1.1E-11 3.7E-16 101.6 8.2 71 60-161 30-100 (119)
351 3apq_A DNAJ homolog subfamily 99.3 7E-12 2.4E-16 113.5 7.7 89 42-161 94-183 (210)
352 1mek_A Protein disulfide isome 99.3 2E-12 7E-17 105.3 3.7 72 225-327 23-94 (120)
353 2o8v_B Thioredoxin 1; disulfid 99.3 7.4E-12 2.5E-16 104.2 7.0 83 48-161 26-109 (128)
354 1gh2_A Thioredoxin-like protei 99.2 1.3E-11 4.5E-16 98.9 8.0 69 60-160 20-88 (107)
355 3gnj_A Thioredoxin domain prot 99.2 1.4E-11 4.8E-16 99.1 8.1 70 60-160 21-90 (111)
356 1x5d_A Protein disulfide-isome 99.2 1.3E-11 4.4E-16 102.8 8.0 68 60-151 24-92 (133)
357 3cxg_A Putative thioredoxin; m 99.2 5.7E-12 1.9E-16 105.6 5.7 76 50-157 29-105 (133)
358 2i4a_A Thioredoxin; acidophIle 99.2 2.1E-11 7.2E-16 97.2 8.8 71 60-161 19-89 (107)
359 2ppt_A Thioredoxin-2; thiredox 99.2 1.4E-11 4.7E-16 106.2 8.1 71 60-161 63-133 (155)
360 1thx_A Thioredoxin, thioredoxi 99.2 1.9E-11 6.4E-16 98.9 8.3 71 60-161 24-94 (115)
361 3qou_A Protein YBBN; thioredox 99.2 1.2E-11 4E-16 117.4 8.2 72 59-161 24-95 (287)
362 3m9j_A Thioredoxin; oxidoreduc 99.2 1.5E-11 5E-16 97.9 7.3 72 58-161 17-88 (105)
363 3aps_A DNAJ homolog subfamily 99.2 2E-11 6.7E-16 100.2 8.0 68 60-157 20-87 (122)
364 2oe3_A Thioredoxin-3; electron 99.2 2.3E-11 7.8E-16 99.0 8.1 70 60-161 29-98 (114)
365 1ep7_A Thioredoxin CH1, H-type 99.2 2E-11 6.9E-16 98.4 7.6 70 61-161 24-93 (112)
366 1xwb_A Thioredoxin; dimerizati 99.2 4.2E-11 1.4E-15 95.3 9.3 72 59-161 18-89 (106)
367 2xhf_A Peroxiredoxin 5; oxidor 99.2 1.5E-11 5.1E-16 107.4 7.1 116 37-162 15-149 (171)
368 2lst_A Thioredoxin; structural 98.9 1.1E-12 3.9E-17 109.0 0.0 81 51-158 9-92 (130)
369 1fb6_A Thioredoxin M; electron 99.2 2.1E-11 7.3E-16 96.9 7.5 71 60-161 17-87 (105)
370 2f51_A Thioredoxin; electron t 99.2 1.8E-11 6.3E-16 100.2 7.2 78 46-151 5-85 (118)
371 2es7_A Q8ZP25_salty, putative 99.2 8.6E-12 3E-16 105.8 5.2 89 227-364 35-127 (142)
372 3uvt_A Thioredoxin domain-cont 99.2 2.5E-11 8.6E-16 97.5 7.7 73 61-161 21-93 (111)
373 1zma_A Bacterocin transport ac 99.2 2.3E-11 7.9E-16 99.4 7.4 75 60-161 28-102 (118)
374 1xiy_A Peroxiredoxin, pfaop; a 99.2 1.6E-11 5.4E-16 108.5 6.8 116 38-162 3-151 (182)
375 3d22_A TRXH4, thioredoxin H-ty 99.2 1.9E-11 6.6E-16 102.8 7.0 73 57-161 42-114 (139)
376 2xc2_A Thioredoxinn; oxidoredu 99.2 1.7E-11 5.8E-16 100.0 6.4 72 57-161 29-100 (117)
377 2qgv_A Hydrogenase-1 operon pr 99.2 7E-12 2.4E-16 105.1 4.0 72 60-161 33-106 (140)
378 1r26_A Thioredoxin; redox-acti 99.2 2.9E-11 9.8E-16 100.2 7.7 69 60-160 36-104 (125)
379 2yzu_A Thioredoxin; redox prot 99.2 4.5E-11 1.5E-15 95.5 8.6 70 60-160 17-86 (109)
380 2yj7_A LPBCA thioredoxin; oxid 98.8 1.6E-12 5.5E-17 103.4 0.0 72 225-330 18-89 (106)
381 3t58_A Sulfhydryl oxidase 1; o 99.2 6.9E-11 2.4E-15 121.2 12.1 97 226-364 30-129 (519)
382 3dml_A Putative uncharacterize 99.2 6.7E-12 2.3E-16 102.0 3.5 96 225-364 17-112 (116)
383 1wmj_A Thioredoxin H-type; str 99.2 2.1E-12 7.3E-17 107.1 0.5 91 224-364 34-124 (130)
384 2djj_A PDI, protein disulfide- 99.2 2.9E-11 9.9E-16 98.9 7.4 83 46-158 9-94 (121)
385 2vlu_A Thioredoxin, thioredoxi 99.2 3.7E-11 1.3E-15 98.5 7.8 70 60-161 33-102 (122)
386 2wz9_A Glutaredoxin-3; protein 99.2 3.4E-11 1.2E-15 103.3 7.9 70 60-161 31-100 (153)
387 2vim_A Thioredoxin, TRX; thior 99.2 4.2E-11 1.4E-15 94.9 7.8 71 59-161 17-87 (104)
388 3uem_A Protein disulfide-isome 99.2 1.5E-10 5.2E-15 113.4 13.4 94 227-364 136-232 (361)
389 1faa_A Thioredoxin F; electron 99.2 4E-11 1.4E-15 98.7 7.7 72 59-161 35-106 (124)
390 1a8l_A Protein disulfide oxido 99.2 2.2E-11 7.5E-16 111.2 6.7 69 224-325 20-89 (226)
391 2l6c_A Thioredoxin; oxidoreduc 99.2 3E-11 1E-15 97.5 6.7 70 60-161 18-87 (110)
392 2e0q_A Thioredoxin; electron t 99.2 2.1E-11 7.2E-16 96.4 5.6 69 60-160 15-83 (104)
393 2i1u_A Thioredoxin, TRX, MPT46 99.2 6.3E-11 2.2E-15 96.8 8.4 71 60-161 29-99 (121)
394 2j23_A Thioredoxin; immune pro 99.2 2E-11 7E-16 100.3 5.4 72 60-161 32-103 (121)
395 1v98_A Thioredoxin; oxidoreduc 99.2 8.3E-11 2.8E-15 99.1 9.2 84 46-160 35-118 (140)
396 1syr_A Thioredoxin; SGPP, stru 99.2 7E-11 2.4E-15 95.5 8.3 70 60-161 25-94 (112)
397 3iv4_A Putative oxidoreductase 99.2 7.4E-11 2.5E-15 94.6 8.0 74 226-331 24-98 (112)
398 1ti3_A Thioredoxin H, PTTRXH1; 99.2 7E-11 2.4E-15 95.2 8.0 71 59-161 24-94 (113)
399 1a0r_P Phosducin, MEKA, PP33; 99.2 3.4E-11 1.1E-15 111.4 6.8 72 225-332 132-203 (245)
400 3ed3_A Protein disulfide-isome 99.1 7.4E-11 2.5E-15 112.8 9.1 69 225-325 34-102 (298)
401 1mek_A Protein disulfide isome 99.1 9.1E-12 3.1E-16 101.4 2.3 72 60-159 23-94 (120)
402 3dxb_A Thioredoxin N-terminall 99.1 4E-11 1.4E-15 109.6 6.8 71 60-161 29-99 (222)
403 2vm1_A Thioredoxin, thioredoxi 99.1 8.9E-11 3E-15 95.4 7.7 70 60-161 27-96 (118)
404 3ph9_A Anterior gradient prote 99.1 4.1E-11 1.4E-15 102.6 5.2 74 58-161 41-116 (151)
405 2ywm_A Glutaredoxin-like prote 99.1 9.6E-11 3.3E-15 107.3 7.7 68 226-325 21-92 (229)
406 1oaz_A Thioredoxin 1; immune s 99.1 3.7E-11 1.3E-15 99.2 4.4 71 60-161 20-104 (123)
407 3ira_A Conserved protein; meth 99.1 1.4E-10 4.9E-15 101.3 8.3 86 54-161 32-120 (173)
408 1wou_A Thioredoxin -related pr 99.1 8.8E-11 3E-15 96.8 6.4 73 59-151 22-101 (123)
409 3ga4_A Dolichyl-diphosphooligo 99.1 3.3E-10 1.1E-14 99.2 10.3 71 225-324 36-113 (178)
410 2dbc_A PDCL2, unnamed protein 99.1 1.4E-10 4.7E-15 97.4 7.4 67 60-161 29-95 (135)
411 2trc_P Phosducin, MEKA, PP33; 99.1 5.1E-11 1.7E-15 108.5 4.8 72 225-332 119-190 (217)
412 1ilo_A Conserved hypothetical 99.1 2.8E-10 9.5E-15 85.2 8.1 62 229-329 2-63 (77)
413 2r2j_A Thioredoxin domain-cont 99.1 5.1E-10 1.7E-14 110.7 12.1 96 225-362 21-117 (382)
414 3emx_A Thioredoxin; structural 99.1 3.8E-11 1.3E-15 100.8 3.4 77 60-161 31-107 (135)
415 3kp8_A Vkorc1/thioredoxin doma 99.1 2.1E-11 7.3E-16 98.0 1.6 73 218-326 4-76 (106)
416 3qcp_A QSOX from trypanosoma b 99.1 1.6E-10 5.6E-15 115.8 7.6 76 225-325 41-116 (470)
417 3evi_A Phosducin-like protein 99.1 1.4E-10 4.7E-15 95.1 5.5 66 61-161 23-88 (118)
418 3iv4_A Putative oxidoreductase 99.0 4E-10 1.4E-14 90.4 7.6 78 61-167 24-102 (112)
419 3ga4_A Dolichyl-diphosphooligo 99.0 1.1E-09 3.8E-14 95.8 10.0 68 60-151 36-112 (178)
420 2yj7_A LPBCA thioredoxin; oxid 98.6 3E-11 1E-15 95.8 0.0 70 60-160 18-87 (106)
421 2b5e_A Protein disulfide-isome 99.0 1.1E-09 3.6E-14 112.4 11.5 69 225-326 30-98 (504)
422 1sji_A Calsequestrin 2, calseq 99.0 5.9E-10 2E-14 108.9 8.9 71 225-329 27-104 (350)
423 3kp8_A Vkorc1/thioredoxin doma 99.0 7.9E-12 2.7E-16 100.6 -3.9 69 53-148 4-72 (106)
424 3f8u_A Protein disulfide-isome 99.0 8.4E-10 2.9E-14 112.4 10.2 71 226-330 21-91 (481)
425 1fo5_A Thioredoxin; disulfide 99.0 3.8E-10 1.3E-14 86.0 5.4 60 62-148 3-62 (85)
426 1nho_A Probable thioredoxin; b 99.0 3.3E-10 1.1E-14 86.3 4.6 59 63-148 3-61 (85)
427 3qcp_A QSOX from trypanosoma b 99.0 9.6E-10 3.3E-14 110.2 8.9 68 60-151 41-113 (470)
428 1wmj_A Thioredoxin H-type; str 99.0 9.1E-11 3.1E-15 97.1 0.8 71 59-161 34-104 (130)
429 2es7_A Q8ZP25_salty, putative 98.9 4.3E-10 1.5E-14 95.3 4.6 69 61-161 34-106 (142)
430 1a0r_P Phosducin, MEKA, PP33; 98.9 6.5E-10 2.2E-14 102.7 5.8 69 60-161 132-200 (245)
431 2dlx_A UBX domain-containing p 98.9 5E-09 1.7E-13 89.7 10.7 94 225-364 41-138 (153)
432 3us3_A Calsequestrin-1; calciu 98.9 4.5E-09 1.5E-13 103.3 11.6 73 225-330 29-107 (367)
433 2hls_A Protein disulfide oxido 98.9 1E-09 3.5E-14 101.7 6.4 65 226-320 25-93 (243)
434 3dml_A Putative uncharacterize 98.9 2.4E-10 8.3E-15 92.8 1.8 75 60-161 17-91 (116)
435 1ilo_A Conserved hypothetical 98.9 3.3E-09 1.1E-13 79.2 7.1 55 64-148 2-56 (77)
436 2trc_P Phosducin, MEKA, PP33; 98.9 7.6E-10 2.6E-14 100.7 4.2 69 60-161 119-187 (217)
437 2fgx_A Putative thioredoxin; N 98.8 1.2E-08 4.2E-13 81.5 8.1 65 228-329 30-94 (107)
438 2djk_A PDI, protein disulfide- 98.8 1.1E-08 3.8E-13 85.3 8.2 92 226-364 23-117 (133)
439 1eej_A Thiol:disulfide interch 98.8 6.4E-08 2.2E-12 87.8 12.5 94 218-326 78-192 (216)
440 3gyk_A 27KDA outer membrane pr 98.7 7.3E-08 2.5E-12 84.1 11.7 39 218-256 14-52 (175)
441 1ttz_A Conserved hypothetical 98.7 2.1E-08 7.3E-13 77.2 7.2 58 230-328 3-60 (87)
442 2dlx_A UBX domain-containing p 98.7 4.4E-08 1.5E-12 83.8 9.0 72 60-159 41-116 (153)
443 2k8s_A Thioredoxin; dimer, str 98.7 1.1E-08 3.6E-13 77.4 4.1 65 230-329 4-68 (80)
444 2c0g_A ERP29 homolog, windbeut 98.7 1.6E-07 5.4E-12 86.8 12.3 70 225-325 32-105 (248)
445 3hd5_A Thiol:disulfide interch 98.6 1.5E-07 5E-12 83.8 9.5 44 224-277 23-66 (195)
446 2znm_A Thiol:disulfide interch 98.6 2.6E-07 8.9E-12 82.0 10.2 43 225-277 21-63 (195)
447 1ego_A Glutaredoxin; electron 98.6 1.8E-07 6.1E-12 71.1 7.8 66 230-328 3-70 (85)
448 3h93_A Thiol:disulfide interch 98.5 3E-07 1E-11 81.5 9.9 43 225-277 24-66 (192)
449 2e7p_A Glutaredoxin; thioredox 98.5 1.9E-07 6.4E-12 75.5 7.5 68 226-329 19-86 (116)
450 2qc7_A ERP31, ERP28, endoplasm 98.5 4.5E-07 1.5E-11 83.4 10.4 70 225-325 21-94 (240)
451 2djk_A PDI, protein disulfide- 98.5 1.1E-07 3.7E-12 79.3 5.7 63 60-150 22-86 (133)
452 4f9z_D Endoplasmic reticulum r 98.5 1.7E-06 5.9E-11 78.8 13.9 194 61-363 27-226 (227)
453 2fgx_A Putative thioredoxin; N 98.5 1.7E-07 5.8E-12 74.9 5.5 63 63-159 30-92 (107)
454 1wjk_A C330018D20RIK protein; 98.5 3.3E-07 1.1E-11 72.4 7.1 63 226-327 15-77 (100)
455 1eej_A Thiol:disulfide interch 98.5 5.2E-07 1.8E-11 81.7 9.3 86 56-148 81-187 (216)
456 2e7p_A Glutaredoxin; thioredox 98.4 2.5E-07 8.6E-12 74.7 5.9 63 60-150 18-80 (116)
457 3gyk_A 27KDA outer membrane pr 98.4 7.1E-07 2.4E-11 77.7 8.8 50 50-103 11-60 (175)
458 1ttz_A Conserved hypothetical 98.4 2E-07 6.8E-12 71.7 4.4 57 65-159 3-59 (87)
459 1hyu_A AHPF, alkyl hydroperoxi 98.4 8.9E-07 3E-11 91.0 10.2 69 224-329 115-183 (521)
460 1v58_A Thiol:disulfide interch 98.4 2.1E-06 7.2E-11 79.1 10.9 97 218-326 89-212 (241)
461 2k8s_A Thioredoxin; dimer, str 98.3 2.1E-07 7.1E-12 70.2 3.3 58 65-148 4-61 (80)
462 2rem_A Disulfide oxidoreductas 98.3 2.6E-06 8.9E-11 75.2 11.0 42 225-276 24-65 (193)
463 3hd5_A Thiol:disulfide interch 98.3 1.4E-06 4.9E-11 77.2 8.5 44 59-105 23-66 (195)
464 2c0g_A ERP29 homolog, windbeut 98.3 1.1E-06 3.8E-11 81.1 7.8 68 60-150 32-103 (248)
465 3kp9_A Vkorc1/thioredoxin doma 98.3 1.8E-07 6.2E-12 88.2 2.2 72 218-326 189-261 (291)
466 1t3b_A Thiol:disulfide interch 98.3 3.1E-06 1E-10 76.3 9.7 85 225-325 85-191 (211)
467 1ego_A Glutaredoxin; electron 98.2 1.4E-06 4.8E-11 66.0 5.2 61 65-150 3-65 (85)
468 1un2_A DSBA, thiol-disulfide i 98.2 2.2E-06 7.5E-11 76.4 6.9 45 224-278 111-158 (197)
469 1z6m_A Conserved hypothetical 98.2 1.1E-05 3.7E-10 70.1 10.9 52 218-277 19-70 (175)
470 3hz8_A Thiol:disulfide interch 98.2 7.3E-06 2.5E-10 72.7 9.8 43 225-277 23-65 (193)
471 2qc7_A ERP31, ERP28, endoplasm 98.2 4.6E-06 1.6E-10 76.6 8.6 67 60-157 21-94 (240)
472 1wjk_A C330018D20RIK protein; 98.1 1.8E-06 6.3E-11 68.1 4.0 56 61-146 15-70 (100)
473 1t3b_A Thiol:disulfide interch 98.1 8.1E-06 2.8E-10 73.5 8.8 83 60-148 85-187 (211)
474 3h93_A Thiol:disulfide interch 98.1 1.6E-05 5.3E-10 70.2 10.4 43 60-105 24-66 (192)
475 2znm_A Thiol:disulfide interch 98.1 8.6E-06 2.9E-10 72.0 7.8 42 60-104 21-62 (195)
476 1hyu_A AHPF, alkyl hydroperoxi 98.0 9.3E-06 3.2E-10 83.4 8.2 74 47-148 95-176 (521)
477 1v58_A Thiol:disulfide interch 98.0 4.3E-05 1.5E-09 70.2 11.2 97 54-158 90-212 (241)
478 1h75_A Glutaredoxin-like prote 97.9 3.6E-05 1.2E-09 57.5 7.8 59 230-327 3-61 (81)
479 3kp9_A Vkorc1/thioredoxin doma 97.9 3.7E-06 1.3E-10 79.2 2.0 60 62-148 198-257 (291)
480 1r7h_A NRDH-redoxin; thioredox 97.8 6.8E-05 2.3E-09 54.9 7.9 59 230-327 3-61 (75)
481 1kte_A Thioltransferase; redox 97.8 2.7E-05 9.4E-10 61.4 5.1 65 230-328 14-80 (105)
482 2rem_A Disulfide oxidoreductas 97.7 7.9E-05 2.7E-09 65.5 8.6 42 60-104 24-65 (193)
483 3hz8_A Thiol:disulfide interch 97.7 0.00013 4.4E-09 64.5 9.9 43 60-105 23-65 (193)
484 2hze_A Glutaredoxin-1; thiored 97.7 2.5E-05 8.6E-10 62.9 4.4 65 229-328 20-87 (114)
485 2lqo_A Putative glutaredoxin R 97.7 0.00022 7.7E-09 55.0 9.3 78 230-362 6-84 (92)
486 1z6m_A Conserved hypothetical 97.7 0.0004 1.4E-08 60.0 11.9 51 53-104 19-69 (175)
487 3gv1_A Disulfide interchange p 97.7 0.00019 6.4E-09 60.6 9.1 92 219-327 7-121 (147)
488 4dvc_A Thiol:disulfide interch 97.6 0.00012 4.1E-09 63.6 8.0 34 225-258 20-53 (184)
489 1h75_A Glutaredoxin-like prote 97.6 0.00012 4E-09 54.6 6.7 53 65-147 3-55 (81)
490 1kte_A Thioltransferase; redox 97.6 8.4E-05 2.9E-09 58.5 5.8 60 65-147 14-73 (105)
491 4h86_A Peroxiredoxin type-2; o 97.6 0.00018 6.3E-09 63.2 8.3 102 218-330 59-178 (199)
492 3feu_A Putative lipoprotein; a 97.6 0.00027 9.4E-09 62.0 9.2 30 226-255 22-51 (185)
493 2hze_A Glutaredoxin-1; thiored 97.5 8.4E-05 2.9E-09 59.8 4.5 59 63-147 19-80 (114)
494 2cq9_A GLRX2 protein, glutared 97.5 0.00016 5.5E-09 59.6 5.8 54 68-147 32-85 (130)
495 2cq9_A GLRX2 protein, glutared 97.5 0.00027 9.3E-09 58.2 7.2 61 231-328 30-92 (130)
496 2ht9_A Glutaredoxin-2; thiored 97.4 0.0003 1E-08 59.3 7.5 61 231-328 52-114 (146)
497 1un2_A DSBA, thiol-disulfide i 97.4 4.2E-05 1.4E-09 68.1 2.0 45 60-107 112-159 (197)
498 3nzn_A Glutaredoxin; structura 97.4 0.001 3.4E-08 52.2 9.9 23 229-251 23-45 (103)
499 2ec4_A FAS-associated factor 1 97.4 0.0052 1.8E-07 53.4 15.3 113 198-329 24-149 (178)
500 2ht9_A Glutaredoxin-2; thiored 97.4 0.00019 6.4E-09 60.6 5.9 54 68-147 54-107 (146)
No 1
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.94 E-value=4e-26 Score=211.90 Aligned_cols=202 Identities=20% Similarity=0.314 Sum_probs=143.3
Q ss_pred ccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccC
Q 014225 47 LNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYS 126 (428)
Q Consensus 47 ~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~ 126 (428)
...+++.+.....+||+++|+|||+||++|+.+.|.|.++++++++.+.++.++.|+.|..
T Consensus 18 ~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~------------------- 78 (241)
T 3idv_A 18 LVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSA------------------- 78 (241)
T ss_dssp EEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTC-------------------
T ss_pred EEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCC-------------------
Confidence 3445555554445789999999999999999999999999999998765677777766543
Q ss_pred ChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccccchhhhhhcccCccccchhhHHHHHHHHHHHHHHHHHhhhhccCC
Q 014225 127 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHD 206 (428)
Q Consensus 127 d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~~~~~~i~~~g~~~~p~t~~~~~~l~~~~~~~~~~~~~~~~~g~~~ 206 (428)
..+++.|++.++|++++++ +|+.+... |. .+.. .+........ .....+.
T Consensus 79 -----~~l~~~~~v~~~Pt~~~~~----~g~~~~~~--------g~----~~~~---~l~~~i~~~~------~~~~~~~ 128 (241)
T 3idv_A 79 -----SVLASRFDVSGYPTIKILK----KGQAVDYE--------GS----RTQE---EIVAKVREVS------QPDWTPP 128 (241)
T ss_dssp -----HHHHHHTTCCSSSEEEEEE----TTEEEECC--------SC----SCHH---HHHHHHHHHH------STTCCCC
T ss_pred -----HHHHHhcCCCcCCEEEEEc----CCCccccc--------Cc----ccHH---HHHHHHhhcc------Ccccccc
Confidence 6789999999999999997 57554221 10 1111 1211111100 0001122
Q ss_pred CCcccCCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHH
Q 014225 207 RGYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESY 286 (428)
Q Consensus 207 p~f~l~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~ 286 (428)
+......++. .+...-..+++++|+||++||++|+.+.|.|.+++++++++ +.++.++.|+++.+
T Consensus 129 ~~~~~~~~~~-~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~-------~~~v~~~~vd~~~~------- 193 (241)
T 3idv_A 129 PEVTLVLTKE-NFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKR-------SPPIPLAKVDATAE------- 193 (241)
T ss_dssp CCSSEECCTT-THHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTS-------SSCCCEEEEETTTC-------
T ss_pred cccceeccHH-HHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhcc-------CCcEEEEEEECCCC-------
Confidence 2333244444 33322235689999999999999999999999999999865 44688898888865
Q ss_pred HhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEec
Q 014225 287 FGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 287 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 329 (428)
.++++.|+|.++||++++ ++|+.+..
T Consensus 194 ----------------~~l~~~~~v~~~Pt~~~~-~~g~~~~~ 219 (241)
T 3idv_A 194 ----------------TDLAKRFDVSGYPTLKIF-RKGRPYDY 219 (241)
T ss_dssp ----------------HHHHHHTTCCSSSEEEEE-ETTEEEEC
T ss_pred ----------------HHHHHHcCCcccCEEEEE-ECCeEEEe
Confidence 679999999999999999 56877664
No 2
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.90 E-value=3.9e-23 Score=176.31 Aligned_cols=136 Identities=32% Similarity=0.588 Sum_probs=121.2
Q ss_pred ccccccC-c-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhc-CCCcEEEEEEecCCChHHHHHH
Q 014225 38 LASKDRD-Y-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRN-NGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 38 ~g~~~pd-f-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
++..+|+ | |.+.+|+++++++++||+++|+||++||++|+.++|.|+++++++++ .+ +++++|++|.+.+.++++
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~--~~vv~v~~d~~~~~~~~~ 80 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKN--FEVMLISWDESAEDFKDY 80 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTT--EEEEEEECCSSHHHHHHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCC--EEEEEEeCCCCHHHHHHH
Confidence 5788999 9 99999999999999999999999999999999999999999999985 34 999999999999999999
Q ss_pred HhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEc-CCCCCCCcccccchhhhhhccc-Cccccc
Q 014225 115 RACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQ-PYDDKDDATLHDGVELIYKYGI-RAFPFT 178 (428)
Q Consensus 115 ~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid-~~~~dG~i~~~~~~~~i~~~g~-~~~p~t 178 (428)
+++++|..+++...+....+++.|++.++|+++||| + +|+++.......+..... ..+||.
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~---~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (144)
T 1i5g_A 81 YAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEAD---SGNIITTQARTMVVKDPEAKDFPWP 143 (144)
T ss_dssp HTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETT---TCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred HHhCCccccccCchHHHHHHHHHcCCCCCCEEEEEECC---CCcEEeccchhhhhhCcccccCCCC
Confidence 999999888886545558999999999999999999 9 999999988877766543 345553
No 3
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.90 E-value=1.8e-23 Score=178.14 Aligned_cols=120 Identities=13% Similarity=0.199 Sum_probs=108.6
Q ss_pred hhhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHH---HHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 200 NLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLS---IYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 200 ~~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~---l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
..+|.++|+|++ +.+|+ .+++++++||++||+||++||++|+.++|.|.+ ++++|++. ++.|++|+
T Consensus 5 ~~~G~~ap~f~l~~~~g~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~---------~~~vi~i~ 74 (142)
T 3eur_A 5 NRLGTKALNFTYTLDSGV-KGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK---------KLKVLSIY 74 (142)
T ss_dssp TCTTSBCCCCEEEETTSC-EEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT---------SEEEEEEE
T ss_pred hcCCCccCCcEEEcCCCC-EeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC---------CeEEEEEE
Confidence 467999999999 99999 999999999999999999999999999999999 99999876 89999999
Q ss_pred cCCCHHHHHHHHhcCCccccccCCcchh--HHHHhcCcCccceEEEECCCCcEEecc
Q 014225 276 TDRDQTSFESYFGTMPWLALPFGDPTIK--ELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 276 ~d~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+|.+.+.+++++.+++ +.++...|... .+.+.|++.++|+++|||++|+|+.++
T Consensus 75 ~d~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (142)
T 3eur_A 75 PDEELDEWKKHRNDFA-KEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKD 130 (142)
T ss_dssp CSSCHHHHHHHGGGSC-TTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEE
T ss_pred cCCCHHHHHHHHHhcc-cccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecC
Confidence 9999999999999887 35566555443 378999999999999999999999985
No 4
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.90 E-value=3.7e-23 Score=175.86 Aligned_cols=118 Identities=14% Similarity=0.267 Sum_probs=109.2
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHH---HHHHHHhhhhhcCCCCCCEEEEEEEc
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLS---IYQKIKQNLVEKGDALEDFEVVFVST 276 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~---l~~~~~~~~~~~~~~~~~~~iv~is~ 276 (428)
.+|.++|+|++ +.+|+ .+++++++||++||+||++||++|+.++|.|.+ ++++|++. ++.|++|++
T Consensus 2 ~~G~~~p~f~l~~~~g~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~---------~~~~v~v~~ 71 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGD-NSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG---------TLRVLAIYP 71 (142)
T ss_dssp CTTSBCCCCEEECTTCC-EEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT---------SEEEEEEEC
T ss_pred CCCCcCCCCEEECCCCC-EEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC---------CeEEEEEEe
Confidence 36999999999 99999 999999999999999999999999999999998 99999876 799999999
Q ss_pred CCCHHHHHHHHhcCCccccccCCcchhHHHH--hcCcCccceEEEECCCCcEEec
Q 014225 277 DRDQTSFESYFGTMPWLALPFGDPTIKELTK--YFDVQGIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 277 d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~v~~~P~~~lid~~G~i~~~ 329 (428)
|.+.+.+++++.+++ +++|...|....+.. .|++.++|+++|||++|+|+.+
T Consensus 72 d~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (142)
T 3ewl_A 72 DENREEWATKAVYMP-QGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVILK 125 (142)
T ss_dssp SSCHHHHHHHHTTSC-TTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEEC
T ss_pred cCCHHHHHHHHHHcC-CCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEec
Confidence 999999999999888 578888887777766 9999999999999999999985
No 5
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.89 E-value=3.4e-23 Score=181.51 Aligned_cols=140 Identities=33% Similarity=0.618 Sum_probs=123.2
Q ss_pred cccccccccCc--cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHH
Q 014225 35 SSLLASKDRDY--LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFN 112 (428)
Q Consensus 35 ~~~~g~~~pdf--l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~ 112 (428)
.+.+|..+|+| |.+.+| ++++++++||+|||+||++||++|+.++|.|++++++|++.. ++++++|++|.+.+.++
T Consensus 21 ~~~vG~~~P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~-~v~vv~v~~d~~~~~~~ 98 (165)
T 3s9f_A 21 MSGVAKHLGEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSK-NFEIILASWDEEEDDFN 98 (165)
T ss_dssp -CHHHHHHHHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTT-TEEEEEEECCCSHHHHH
T ss_pred hhhhcccCCcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCC-CeEEEEEecCCCHHHHH
Confidence 44678999998 899999 999999999999999999999999999999999999998731 39999999999999999
Q ss_pred HHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCC-CCcccccchhhhhh-cccCccccch
Q 014225 113 NYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDK-DDATLHDGVELIYK-YGIRAFPFTK 179 (428)
Q Consensus 113 ~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~d-G~i~~~~~~~~i~~-~g~~~~p~t~ 179 (428)
+++++++|..+++...+....+++.|++.++|+++|||+ + |+++.+...+.+.+ .....|||..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~---~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 99 AYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLNA---DTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp HHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEET---TTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred HHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEeC---CCCEEEecccHHHHhhCcccccCCCCC
Confidence 999999999999877665589999999999999999999 9 99999988766544 4455577753
No 6
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.89 E-value=8.2e-23 Score=176.08 Aligned_cols=135 Identities=22% Similarity=0.271 Sum_probs=118.9
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCH
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 280 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~ 280 (428)
+|.++|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|+++ ++.|++|++|.+.
T Consensus 5 ~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~d~~~ 74 (152)
T 2lrn_A 5 TGSVAPAITGIDLKGN-SVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK---------GFTIYGVSTDRRE 74 (152)
T ss_dssp TTEECCCCEEECSSSC-EEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT---------TEEEEEEECCSCH
T ss_pred CCCcCCCceeEcCCCC-EEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC---------CeEEEEEEccCCH
Confidence 6889999999 99999 99999999999999999999999999999999999999865 7999999999989
Q ss_pred HHHHHHHhcCCccccccCCcc---hhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHH
Q 014225 281 TSFESYFGTMPWLALPFGDPT---IKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQM 357 (428)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l 357 (428)
+.+++++.+.+ +++|...|. ...+++.|++.++|+++|||++|+++.+.. +. ++|.+.|
T Consensus 75 ~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~--------------~~---~~l~~~l 136 (152)
T 2lrn_A 75 EDWKKAIEEDK-SYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKEL--------------RG---DDLYNTV 136 (152)
T ss_dssp HHHHHHHHHHT-CCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEECC--------------CT---THHHHHH
T ss_pred HHHHHHHHHhC-CCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEeeC--------------CH---HHHHHHH
Confidence 99999998776 567777776 688999999999999999999999998841 11 4667777
Q ss_pred HHHHhcC
Q 014225 358 EEEAKNL 364 (428)
Q Consensus 358 ~~~~~~~ 364 (428)
+++++..
T Consensus 137 ~~l~~~~ 143 (152)
T 2lrn_A 137 EKFVNGA 143 (152)
T ss_dssp HHHHTSS
T ss_pred HHHHhhc
Confidence 7777644
No 7
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.89 E-value=5.5e-23 Score=175.43 Aligned_cols=127 Identities=37% Similarity=0.681 Sum_probs=115.9
Q ss_pred hccCCCC-ccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 202 LTNHDRG-YLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 202 ~g~~~p~-f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
++..+|+ |++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|+++ .++.|++|++|.+
T Consensus 3 ~~~~~P~~f~l~~~~g~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--------~~~~vv~v~~d~~ 73 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAA-DIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK--------KNFEVMLISWDES 73 (144)
T ss_dssp TTTSCSSCSEEEETTEE-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCSS
T ss_pred hhhhCCCceEEEcCCCC-EecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--------CCEEEEEEeCCCC
Confidence 5788999 999 99999 99999999999999999999999999999999999999752 2799999999999
Q ss_pred HHHHHHHHhcCCccccccCC-cchhHHHHhcCcCccceEEEEC-CCCcEEeccccchhhc
Q 014225 280 QTSFESYFGTMPWLALPFGD-PTIKELTKYFDVQGIPCLVIIG-PEGKTVTKQGRNLINL 337 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~~~ 337 (428)
.+.+++|+.+++|..+|+.. |....+++.|+|.++|+++||| ++|+++.++++..+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~ 133 (144)
T 1i5g_A 74 AEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVK 133 (144)
T ss_dssp HHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHH
T ss_pred HHHHHHHHHhCCccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhh
Confidence 99999999999999999876 5678899999999999999999 9999999987766543
No 8
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=1.2e-22 Score=174.53 Aligned_cols=134 Identities=20% Similarity=0.240 Sum_probs=117.6
Q ss_pred hhccCCCCccc-CCCCCceeccc--ccCCcEEEEEEeccCChh--HHhhhHHHHHHHHHH-HhhhhhcCCCCCCEEEEEE
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVS--SLVGKTVGLYFSARWCIP--CEKFMPKLLSIYQKI-KQNLVEKGDALEDFEVVFV 274 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~--~~~gk~vll~F~a~wC~~--C~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~iv~i 274 (428)
.+|.++|+|++ +.+|+ .++++ +++||+++|+||++||++ |+.++|.|.+++++| +++ ++.+++|
T Consensus 6 ~~G~~~p~f~l~~~~g~-~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~---------~~~~v~v 75 (150)
T 3fw2_A 6 EIGKYAPFFSLPNAKGE-KITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNK---------YIGMLGI 75 (150)
T ss_dssp STTSBCCCCCEEBTTCC-EECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS---------SEEEEEE
T ss_pred cCCCcCCccEeECCCCC-EEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC---------CeEEEEE
Confidence 36999999999 99999 99999 999999999999999999 999999999999999 654 7999999
Q ss_pred EcCCCHHHHHHHHhcCCccccccCCcc---hhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHH
Q 014225 275 STDRDQTSFESYFGTMPWLALPFGDPT---IKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLE 351 (428)
Q Consensus 275 s~d~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~ 351 (428)
++|.+.+.+++|+++++ +++|...|. ...+.+.|++.++|+++|||++|+|+.+.. + .+
T Consensus 76 ~~d~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~--------------~---~~ 137 (150)
T 3fw2_A 76 SLDVDKQQWKDAIKRDT-LDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKNL--------------R---GE 137 (150)
T ss_dssp ECCSCHHHHHHHHHHTT-CCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC--------------C---HH
T ss_pred EcCCCHHHHHHHHHHhC-CCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEccC--------------C---HH
Confidence 99999899999999877 466766665 679999999999999999999999999852 1 25
Q ss_pred HHHHHHHHHHh
Q 014225 352 FLEKQMEEEAK 362 (428)
Q Consensus 352 ~L~~~l~~~~~ 362 (428)
+|.+.|+++++
T Consensus 138 ~l~~~l~~ll~ 148 (150)
T 3fw2_A 138 ELKKKIENIVE 148 (150)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 66677776665
No 9
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.89 E-value=8.3e-23 Score=173.95 Aligned_cols=122 Identities=17% Similarity=0.227 Sum_probs=107.5
Q ss_pred ccccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHH---HHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 36 SLLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVD---VYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 36 ~~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~---l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
..+|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|++ +++++++.+ +++++|+.|.+.+.+
T Consensus 5 ~~~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~--~~vi~i~~d~~~~~~ 82 (142)
T 3eur_A 5 NRLGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKK--LKVLSIYPDEELDEW 82 (142)
T ss_dssp TCTTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTS--EEEEEEECSSCHHHH
T ss_pred hcCCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCC--eEEEEEEcCCCHHHH
Confidence 4679999999 9999999999999999999999999999999999999999 999998876 999999999999999
Q ss_pred HHHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCccccc
Q 014225 112 NNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 112 ~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~~ 162 (428)
++++++++.......+.+....+.+.|++.++|+++|||+ +|+++.+.
T Consensus 83 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~ 130 (142)
T 3eur_A 83 KKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDK---NKTVLLKD 130 (142)
T ss_dssp HHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECT---TCBEEEEE
T ss_pred HHHHHhcccccccccCccchhhhhhhcCCCcCCeEEEECC---CCcEEecC
Confidence 9999987743222334443356899999999999999999 99998764
No 10
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.89 E-value=1.5e-22 Score=173.22 Aligned_cols=137 Identities=34% Similarity=0.635 Sum_probs=119.8
Q ss_pred cccccccC-c-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHH
Q 014225 37 LLASKDRD-Y-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 37 ~~g~~~pd-f-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
.+++.+|+ | |.+.+| .+++++++||+++|+||++||++|+.++|.|+++++++++.+ ++++++|++|.+.+.++++
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~-~~~vv~v~~d~~~~~~~~~ 80 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESK-NFEVVFCTWDEEEDGFAGY 80 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTT-TEEEEEEECCCSHHHHHHH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcC-CeEEEEEeCCCCHHHHHHH
Confidence 35788999 8 999999 999999999999999999999999999999999999998521 3999999999999999999
Q ss_pred HhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEc-CCCCCCCcccccchhhhhhccc-Cccccc
Q 014225 115 RACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQ-PYDDKDDATLHDGVELIYKYGI-RAFPFT 178 (428)
Q Consensus 115 ~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid-~~~~dG~i~~~~~~~~i~~~g~-~~~p~t 178 (428)
+++++|..+++...+....+++.|++.++|+++||| + +|+++.....+.+.+... ..++|.
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~---~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (146)
T 1o8x_A 81 FAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDAD---SGDVVTTRARATLVKDPEGEQFPWK 143 (146)
T ss_dssp HTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETT---TCCEEESCHHHHHTTCTTCTTTTCC
T ss_pred HHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEECC---CCeEEEecchhHHhhCCccccCCCC
Confidence 999999888876545558999999999999999999 9 999999988776655443 345554
No 11
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.89 E-value=8.7e-23 Score=175.49 Aligned_cols=140 Identities=23% Similarity=0.411 Sum_probs=120.7
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCH
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 280 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~ 280 (428)
+|.++|+|.+ +.+|+ .+++++++||++||+||++||++|+.++|.|.++++++++. ++.+++|++|.+.
T Consensus 2 ~G~~~p~~~l~~~~g~-~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~v~~d~~~ 71 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGK-RIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ---------GVEIVAVNVGESK 71 (151)
T ss_dssp CCEECCCCEEECTTCC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---------TEEEEEEEESCCH
T ss_pred CCCcCCcceeEcCCCC-EEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC---------CeEEEEEECCCCH
Confidence 4889999999 99999 99999999999999999999999999999999999999876 7999999999888
Q ss_pred HHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHH
Q 014225 281 TSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEE 360 (428)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~ 360 (428)
+.+++|+..++ +.+|+..|....+.+.|++.++|+++|||++|+++.+..+. .+ .++|.+.|+++
T Consensus 72 ~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~-----------~~---~~~l~~~l~~l 136 (151)
T 2f9s_A 72 IAVHNFMKSYG-VNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGT-----------MT---ESMIHDYMNLI 136 (151)
T ss_dssp HHHHHHHHHHT-CCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEEESC-----------CC---HHHHHHHHHHH
T ss_pred HHHHHHHHHcC-CCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEEeCC-----------CC---HHHHHHHHHHH
Confidence 99999999877 57888888888999999999999999999999999874321 12 35677777777
Q ss_pred HhcCCC
Q 014225 361 AKNLPR 366 (428)
Q Consensus 361 ~~~~~~ 366 (428)
++....
T Consensus 137 l~~~~~ 142 (151)
T 2f9s_A 137 KPGETS 142 (151)
T ss_dssp SCC---
T ss_pred Hhhhhc
Confidence 665433
No 12
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.89 E-value=6.6e-24 Score=184.54 Aligned_cols=137 Identities=24% Similarity=0.249 Sum_probs=110.6
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
+|+++|+|++ +.+|+ .+++++++||+++|+|| ++|||+|..++|.|.++++++++. ++.+++||.| +
T Consensus 6 vG~~aPdF~l~~~~G~-~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~---------~~~~v~vs~d-~ 74 (157)
T 4g2e_A 6 IGELAPDFELPDTELK-KVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV---------NAVVLGISVD-P 74 (157)
T ss_dssp TTSBCCCCEEEBTTSC-EEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGC---------SSEEEEEESS-C
T ss_pred CCCCCcCeEeECCCCC-EEeHHHHCCCeEEEEecCCCCCCccccchhhccccccccccc---------CceEeeeccc-c
Confidence 6999999999 99999 99999999999999999 899999999999999999999876 8999999998 6
Q ss_pred HHHHHHHHhcCCccccccCCcchhHHHHhcCcC-----------ccceEEEECCCCcEEeccccchhhcccccCCCCChH
Q 014225 280 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEA 348 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~ 348 (428)
.+..++|.++.+ ++||++.|.+.++++.|||. ..|++||||++|+|++++.+.. +..+.
T Consensus 75 ~~~~~~~~~~~~-~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~---------~~~~~ 144 (157)
T 4g2e_A 75 PFSNKAFKEHNK-LNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDD---------PTKEP 144 (157)
T ss_dssp HHHHHHHHHHTT-CCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESS---------TTCCC
T ss_pred hhHHHHHHHHcC-CcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCC---------CCCCC
Confidence 778888888877 68999999999999999983 4689999999999998754322 22333
Q ss_pred HHHHHHHHHHH
Q 014225 349 KLEFLEKQMEE 359 (428)
Q Consensus 349 ~~~~L~~~l~~ 359 (428)
..+++.+.|++
T Consensus 145 ~~~eil~~l~~ 155 (157)
T 4g2e_A 145 PYDEIEKVVKS 155 (157)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 45666666654
No 13
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.89 E-value=1e-22 Score=177.58 Aligned_cols=140 Identities=15% Similarity=0.189 Sum_probs=122.7
Q ss_pred hccCCCCccc-CCCCCceecccccCCcE-EEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKT-VGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 278 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~-vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~ 278 (428)
+|.++|+|++ +.+|+ .+++++++||+ +||+|| ++||++|..++|.|.+++++|+++ ++.||+|++|
T Consensus 4 ~G~~~P~f~l~~~~G~-~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~vs~d- 72 (161)
T 3drn_A 4 VGDKAPLFEGIADNGE-KISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY---------DVVVIGVSSD- 72 (161)
T ss_dssp TTSBCCCCEEEETTSC-EEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT---------CEEEEEEESC-
T ss_pred CCCcCCCeEeecCCCC-EEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc---------CCEEEEEeCC-
Confidence 5899999999 99999 99999999997 999999 999999999999999999999976 7999999998
Q ss_pred CHHHHHHHHhcCCccccccCCcchhHHHHhcCcCc----cceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHH
Q 014225 279 DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQG----IPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLE 354 (428)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~----~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~ 354 (428)
+.+.+++|.++++ +.+|+..|....+.+.|++.+ +|++||||++|+|+.+..+.. ..+..++++.
T Consensus 73 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~~----------~~~~~~~~il 141 (161)
T 3drn_A 73 DINSHKRFKEKYK-LPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQM----------NPANHVNEAL 141 (161)
T ss_dssp CHHHHHHHHHHTT-CCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECSS----------CTTHHHHHHH
T ss_pred CHHHHHHHHHHhC-CCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecCC----------CCCcCHHHHH
Confidence 6889999999887 568888888899999999999 999999999999998854311 2345667777
Q ss_pred HHHHHHHhc
Q 014225 355 KQMEEEAKN 363 (428)
Q Consensus 355 ~~l~~~~~~ 363 (428)
+.|+++...
T Consensus 142 ~~l~~l~~~ 150 (161)
T 3drn_A 142 KALKQIKEE 150 (161)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhhhh
Confidence 777776543
No 14
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.88 E-value=1.4e-22 Score=173.03 Aligned_cols=138 Identities=15% Similarity=0.194 Sum_probs=120.4
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
.+|.++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|+++ ++.+++|++|.+
T Consensus 6 ~~G~~~p~~~l~~~~g~-~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~~v~v~~d~~ 75 (148)
T 3hcz_A 6 LLGKKAPNLYMTDTTGT-YRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK---------GIQVYAANIERK 75 (148)
T ss_dssp CTTSBCCCCCCBCTTSC-BCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG---------TEEEEEEECCSS
T ss_pred CCCCcCCceEEecCCCC-EEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC---------CEEEEEEEecCC
Confidence 46999999999 99999 99999999999999999999999999999999999999876 799999999988
Q ss_pred HHHHHHHHhcCCccccccCCcchhH--HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHH
Q 014225 280 QTSFESYFGTMPWLALPFGDPTIKE--LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQM 357 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l 357 (428)
.+.+++|+.++++..++...|.... +++.|++.++|+++|||++|+++.+..+ ...++++.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g--------------~~~~~~~l~~l 141 (148)
T 3hcz_A 76 DEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRIG--------------YENLDDFLVQY 141 (148)
T ss_dssp SHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESCC--------------GGGHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEecCC--------------HHHHHHHHHHH
Confidence 8899999998886557777776666 9999999999999999999999988532 23456666666
Q ss_pred HHHHh
Q 014225 358 EEEAK 362 (428)
Q Consensus 358 ~~~~~ 362 (428)
.++++
T Consensus 142 ~~~l~ 146 (148)
T 3hcz_A 142 EKSLK 146 (148)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 66554
No 15
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.88 E-value=3.7e-22 Score=170.02 Aligned_cols=137 Identities=36% Similarity=0.631 Sum_probs=120.2
Q ss_pred ccccccccCc--cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhc-CCCcEEEEEEecCCChHHHH
Q 014225 36 SLLASKDRDY--LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRN-NGSDFEVVFVSSDEDLNAFN 112 (428)
Q Consensus 36 ~~~g~~~pdf--l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~~ii~vs~D~~~~~~~ 112 (428)
+.+|..+|+| |.+.+| ++++++++||+++|+||++||++|+.++|.|+++++++++ .+ +++++|++|.+.+.++
T Consensus 2 ~~~g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~--~~vv~i~~d~~~~~~~ 78 (144)
T 1o73_A 2 SGLAKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKN--FEVVLISWDENESDFH 78 (144)
T ss_dssp CGGGGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTT--EEEEEEECCSSHHHHH
T ss_pred cchhhhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCC--EEEEEEeCCCCHHHHH
Confidence 3468899996 999999 9999999999999999999999999999999999999984 34 9999999999999999
Q ss_pred HHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEc-CCCCCCCcccccchhhhhhccc-Cccccc
Q 014225 113 NYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQ-PYDDKDDATLHDGVELIYKYGI-RAFPFT 178 (428)
Q Consensus 113 ~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid-~~~~dG~i~~~~~~~~i~~~g~-~~~p~t 178 (428)
+++++++|..+++...+....+.+.|++.++|++++|| + +|+++.+.+.+.+.+... ..|+|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~---~G~i~~~~~~~~~~~~~~~~~~~W~ 143 (144)
T 1o73_A 79 DYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINAD---TGAIIGTQARTRVIEDPDGANFPWP 143 (144)
T ss_dssp HHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEETT---TCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred HHHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEECC---CCeEEecchhhHHhhCCCccCCCCC
Confidence 99999999888886555558899999999999999999 9 999999988777655443 335553
No 16
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.88 E-value=7.1e-23 Score=179.46 Aligned_cols=136 Identities=35% Similarity=0.725 Sum_probs=117.3
Q ss_pred hhccCCCCc-cc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC
Q 014225 201 LLTNHDRGY-LL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 278 (428)
Q Consensus 201 ~~g~~~p~f-~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~ 278 (428)
.+|.++|+| .+ +.+| .+++++++||+|||+||++||++|++++|.|.+++++|++. .++.|++|++|.
T Consensus 23 ~vG~~~P~f~~l~~~~g--~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~--------~~v~vv~v~~d~ 92 (165)
T 3s9f_A 23 GVAKHLGEALKLRKQAD--TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS--------KNFEIILASWDE 92 (165)
T ss_dssp HHHHHHHHTSCEEETTE--EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCC
T ss_pred hhcccCCcceeeecCCC--cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC--------CCeEEEEEecCC
Confidence 468889999 78 8887 79999999999999999999999999999999999999862 279999999999
Q ss_pred CHHHHHHHHhcCCccccccCCcch-hHHHHhcCcCccceEEEECCC-CcEEeccccchh-hcccccCCCCC
Q 014225 279 DQTSFESYFGTMPWLALPFGDPTI-KELTKYFDVQGIPCLVIIGPE-GKTVTKQGRNLI-NLYQENAYPFT 346 (428)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~v~~~P~~~lid~~-G~i~~~~~~~~~-~~~g~~~~p~~ 346 (428)
+.+.+++++.+++|..+++..+.. ..+++.|+|.++|+++|||++ |+|+.+.++..+ .......||+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~ 163 (165)
T 3s9f_A 93 EEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWR 163 (165)
T ss_dssp SHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred CHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCC
Confidence 999999999999999999877654 899999999999999999998 999999876554 22233334543
No 17
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.88 E-value=1.6e-22 Score=175.12 Aligned_cols=139 Identities=12% Similarity=0.208 Sum_probs=117.4
Q ss_pred hccCCCCccc-C--CCCCceecccccCCcEEEEEEeccCChhHHhh-hHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 202 LTNHDRGYLL-G--HPPDEKVPVSSLVGKTVGLYFSARWCIPCEKF-MPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 202 ~g~~~p~f~l-~--~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~-~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
.|.++|+|++ + .+|+ .+++++++||++||+||++||++|+.+ +|.|.+++++|++. ++.+++|++|
T Consensus 2 ~g~~aP~f~l~~~~~~g~-~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~---------~v~~v~v~~~ 71 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSAT-DLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED---------KVAVLGLHTV 71 (158)
T ss_dssp CCEECCCCCEEEEESCSS-CCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT---------TEEEEEEECC
T ss_pred CCCcCCCceehhhhcCCC-ccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC---------CEEEEEEEec
Confidence 3788999999 7 3788 999999999999999999999999996 99999999999865 7999999984
Q ss_pred ------CCHHHHHHHHhcCCccccccCCcchh-----HHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCC
Q 014225 278 ------RDQTSFESYFGTMPWLALPFGDPTIK-----ELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFT 346 (428)
Q Consensus 278 ------~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~ 346 (428)
.+.+.+++|+++++ +.+|+..|... .+++.|++.++|+++|||++|+++.+..+. .+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~ 139 (158)
T 3eyt_A 72 FEHHEAMTPISLKAFLHEYR-IKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGD-----------VS 139 (158)
T ss_dssp CSCGGGSCHHHHHHHHHHTT-CCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEEESC-----------CC
T ss_pred ccccccCCHHHHHHHHHHcC-CCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCC-----------CC
Confidence 47889999999887 56777666655 799999999999999999999999875331 22
Q ss_pred hHHHHHHHHHHHHHHhcCC
Q 014225 347 EAKLEFLEKQMEEEAKNLP 365 (428)
Q Consensus 347 ~~~~~~L~~~l~~~~~~~~ 365 (428)
.++|.+.|+++++...
T Consensus 140 ---~~~l~~~i~~ll~~~~ 155 (158)
T 3eyt_A 140 ---ELLLGAEIATLLGEAA 155 (158)
T ss_dssp ---HHHHHHHHHHHHTSCC
T ss_pred ---HHHHHHHHHHHhccCC
Confidence 3567888888887543
No 18
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.88 E-value=1.2e-22 Score=176.15 Aligned_cols=139 Identities=14% Similarity=0.182 Sum_probs=119.0
Q ss_pred hhhccCCCCccc-C-CCCCceecccccCCcEEEEEEeccCChhHHhh-hHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEc
Q 014225 200 NLLTNHDRGYLL-G-HPPDEKVPVSSLVGKTVGLYFSARWCIPCEKF-MPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 276 (428)
Q Consensus 200 ~~~g~~~p~f~l-~-~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~-~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~ 276 (428)
.+.|.++|+|.+ + .+|+ .+++++++||++||+||++||++|+.+ +|.|.+++++|+++ ++.|++|++
T Consensus 3 ~~~g~~~p~~~~~~~~~g~-~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~---------~v~~v~v~~ 72 (160)
T 3lor_A 3 SLDNAPLLELDVQEWVNHE-GLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES---------QVQVIGLHS 72 (160)
T ss_dssp -CTTCCBCCCCEEEESSSC-CCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT---------TEEEEEEEC
T ss_pred ccCCCcCCCcccccccCCC-ccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC---------CcEEEEEec
Confidence 356899999999 7 8999 999999999999999999999999995 99999999999866 799999998
Q ss_pred C------CCHHHHHHHHhcCCccccccCCcchhH------HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCC
Q 014225 277 D------RDQTSFESYFGTMPWLALPFGDPTIKE------LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYP 344 (428)
Q Consensus 277 d------~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p 344 (428)
| .+.+.+++|+++++ +.+|+..|.... +.+.|++.++|+++|||++|+++.+..+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~----------- 140 (160)
T 3lor_A 73 VFEHHDVMTPEALKVFIDEFG-IKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQ----------- 140 (160)
T ss_dssp CCSCGGGSCHHHHHHHHHHTT-CCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESC-----------
T ss_pred cccccccCCHHHHHHHHHHcC-CCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCc-----------
Confidence 4 57889999999887 567877776666 99999999999999999999999985431
Q ss_pred CChHHHHHHHHHHHHHHhc
Q 014225 345 FTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 345 ~~~~~~~~L~~~l~~~~~~ 363 (428)
.+ .++|.+.|+++++.
T Consensus 141 ~~---~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 141 VD---DFVLGLLLGSLLSE 156 (160)
T ss_dssp CC---HHHHHHHHHHHHTC
T ss_pred CC---HHHHHHHHHHHHhc
Confidence 22 25677888887764
No 19
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.88 E-value=3e-22 Score=183.64 Aligned_cols=151 Identities=9% Similarity=0.082 Sum_probs=126.3
Q ss_pred hhccCCCCccc-CCCCCceecccccCCc-EEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC-
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGK-TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 277 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk-~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d- 277 (428)
.+|.++|+|++ +.+|+ .+++++++|| +|||+||++|||+|+.++|.|++++++|+++ ++.||+|++|
T Consensus 33 ~~G~~aP~f~l~~~~G~-~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~Vs~d~ 102 (218)
T 3u5r_E 33 TLGTRAADFVLPDAGGN-LFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ---------GLAVVAINSND 102 (218)
T ss_dssp CTTCBCCCCCEECTTCC-EECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT---------TEEEEEEECSC
T ss_pred CCCCcCCCcEeECCCCC-EEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC---------CcEEEEEECCc
Confidence 36999999999 99999 9999999999 5999999999999999999999999999876 7999999996
Q ss_pred ------CCHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHH
Q 014225 278 ------RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLE 351 (428)
Q Consensus 278 ------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~ 351 (428)
.+.+.+++|..+.+ +.||+..|....+++.|++.++|+++|||++|+|++++..+... .+. ......+
T Consensus 103 ~~~~~~d~~~~~~~~~~~~~-~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~-~~~----~~~~~~~ 176 (218)
T 3u5r_E 103 AQAFPEETLERVGAEVKAYG-YGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDAR-PGN----GKDVTGA 176 (218)
T ss_dssp TTTCGGGSHHHHHHHHHHHT-CCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCC-TTS----CCCCCCH
T ss_pred ccccccCCHHHHHHHHHHhC-CCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccc-ccc----ccccCHH
Confidence 57889999999877 68888888889999999999999999999999999875433210 000 0111236
Q ss_pred HHHHHHHHHHhcCCCC
Q 014225 352 FLEKQMEEEAKNLPRS 367 (428)
Q Consensus 352 ~L~~~l~~~~~~~~~~ 367 (428)
+|.+.|++++++.+..
T Consensus 177 ~l~~~i~~ll~~~~~~ 192 (218)
T 3u5r_E 177 DLRAAVDAVLKGKDVG 192 (218)
T ss_dssp HHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHcCCCCC
Confidence 7888888888876543
No 20
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.88 E-value=2.3e-21 Score=178.24 Aligned_cols=188 Identities=14% Similarity=0.150 Sum_probs=124.1
Q ss_pred cCCCCEEEEEEecC-CChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHh
Q 014225 58 DLEGKVTALYFSAN-WYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 136 (428)
Q Consensus 58 ~~~gk~vlv~F~a~-wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 136 (428)
..++++++++||++ ||++|+...|.+.++++. .+ ++.++.|++|..+. ..+++
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~---~v~~~~vd~~~~~~----------------------~~~~~ 72 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD---KLSYEIVDFDTPEG----------------------KELAK 72 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT---TEEEEEEETTSHHH----------------------HHHHH
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC---ceEEEEEeCCCccc----------------------HHHHH
Confidence 35567889999999 999999999999998754 22 38888776653212 78999
Q ss_pred hcCCCCCceEEEEcCCCCCCCcccccchhhhhhcccCccccchhhHHHHHHHHHHHHHHHHHhhhhccCCCCcccCCCCC
Q 014225 137 KFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGHPPD 216 (428)
Q Consensus 137 ~~~v~~~P~~~lid~~~~dG~i~~~~~~~~i~~~g~~~~p~t~~~~~~l~~~~~~~~~~~~~~~~~g~~~p~f~l~~~g~ 216 (428)
.|++.++|+++++. +|........ | .+........+....... + ... ..+..
T Consensus 73 ~~~v~~~Pt~~~~~----~g~~~~~~~~------G---~~~~~~l~~~l~~~l~~~----------~-~~~----~l~~~ 124 (226)
T 1a8l_A 73 RYRIDRAPATTITQ----DGKDFGVRYF------G---LPAGHEFAAFLEDIVDVS----------R-EET----NLMDE 124 (226)
T ss_dssp HTTCCSSSEEEEEE----TTBCCSEEEE------S---CCCTTHHHHHHHHHHHHH----------H-TCC----CCCHH
T ss_pred HcCCCcCceEEEEc----CCceeeEEEe------c---cCcHHHHHHHHHHHHhhc----------C-CCC----CCCHH
Confidence 99999999999996 5643211000 1 111111111111111100 0 000 11111
Q ss_pred ceec-ccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCcccc
Q 014225 217 EKVP-VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLAL 295 (428)
Q Consensus 217 ~~v~-l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~ 295 (428)
.+. +....+++++|.||++||++|+.+.|.|.+++++++++. ..++.++.|+++.+
T Consensus 125 -~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~------~~~v~~~~vd~~~~---------------- 181 (226)
T 1a8l_A 125 -TKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAG------KGKILGDMVEAIEY---------------- 181 (226)
T ss_dssp -HHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTT------CCCEEEEEEEGGGC----------------
T ss_pred -HHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhccccc------CCcEEEEEEEcccC----------------
Confidence 111 222334556999999999999999999999999987310 12588888888754
Q ss_pred ccCCcchhHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 296 PFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 296 ~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
.++++.|+|.++||++++ ++|+.+.+.
T Consensus 182 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~~~ 208 (226)
T 1a8l_A 182 -------PEWADQYNVMAVPKIVIQ-VNGEDRVEF 208 (226)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEEEEE
T ss_pred -------HHHHHhCCCcccCeEEEE-eCCceeEEE
Confidence 678999999999998888 789887653
No 21
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.88 E-value=2.3e-22 Score=171.43 Aligned_cols=119 Identities=16% Similarity=0.088 Sum_probs=101.0
Q ss_pred hhccCCCCcccCCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCH
Q 014225 201 LLTNHDRGYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 280 (428)
Q Consensus 201 ~~g~~~p~f~l~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~ 280 (428)
.+|.++|+|+++.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|+++ ++.|++|++|.+.
T Consensus 8 ~~G~~~P~f~l~~~g~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~---------~~~vv~vs~d~~~ 77 (143)
T 4fo5_A 8 NPGDLAPRIEFLGNDA-KASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD---------KIAMCSISMDEKE 77 (143)
T ss_dssp STTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT---------TEEEEEEECCSCH
T ss_pred CCcccCCceEEcCCCC-EEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC---------CEEEEEEEccCCH
Confidence 3689999999988999 99999999999999999999999999999999999999865 7999999999999
Q ss_pred HHHHHHHhcCCcccc-ccCCc---chhHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 281 TSFESYFGTMPWLAL-PFGDP---TIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 281 ~~~~~~~~~~~~~~~-~~~~d---~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+.+++++++.+ +.+ +...| ....+.+.|++.++|+++|||++|+|+.++
T Consensus 78 ~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (143)
T 4fo5_A 78 SIFTETVKIDK-LDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEGVIIAAN 130 (143)
T ss_dssp HHHHHHHHHHT-CCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEES
T ss_pred HHHHHHHHHhC-CCCceeeecccccchHHHHHcCCCCCCcEEEECCCCEEEEcc
Confidence 99999999765 333 33333 356899999999999999999999999985
No 22
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.88 E-value=3.9e-22 Score=171.40 Aligned_cols=138 Identities=25% Similarity=0.408 Sum_probs=121.1
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCH
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 280 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~ 280 (428)
+|.++|+|.+ + +|. .+++++++||++||+||++||++|+.++|.|.+++++|++. ++.+++|++|.+.
T Consensus 5 ~G~~~P~f~l~~-~g~-~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~~v~v~~d~~~ 73 (152)
T 3gl3_A 5 KGDKAPDFALPG-KTG-VVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK---------GFQVVAVNLDAKT 73 (152)
T ss_dssp TTSBCCCCEEEB-SSS-EEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG---------TEEEEEEECCSSH
T ss_pred CCCcCCceEeeC-CCC-eEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC---------CeEEEEEECCCCH
Confidence 5899999999 8 999 99999999999999999999999999999999999999876 7999999999999
Q ss_pred HHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHH
Q 014225 281 TSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEE 360 (428)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~ 360 (428)
+.+.+++.+.+ +.+++..|....+.+.|++.++|+++|||++|+++.+..+ ..+...++|.+.|++.
T Consensus 74 ~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g------------~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 74 GDAMKFLAQVP-AEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVG------------FRPADKEALEQQILAA 140 (152)
T ss_dssp HHHHHHHHHSC-CCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEES------------CCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-CCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEcc------------CCCcCHHHHHHHHHHH
Confidence 99999999887 5788888888899999999999999999999999987533 1223456777777776
Q ss_pred Hhc
Q 014225 361 AKN 363 (428)
Q Consensus 361 ~~~ 363 (428)
+..
T Consensus 141 ~~~ 143 (152)
T 3gl3_A 141 LGG 143 (152)
T ss_dssp TC-
T ss_pred Hcc
Confidence 553
No 23
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.88 E-value=3.6e-22 Score=170.43 Aligned_cols=134 Identities=20% Similarity=0.295 Sum_probs=117.0
Q ss_pred hhccCCCCccc-CCCCCceeccc--ccCCcEEEEEEeccCChhHHhhhHHHHHHHHHH-HhhhhhcCCCCCCEEEEEEEc
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVS--SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKI-KQNLVEKGDALEDFEVVFVST 276 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~--~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~iv~is~ 276 (428)
.+|.++|+|.+ +.+|+ .++++ +++||+++|+||++||++|+.++|.|.+++++| ++. ++.+++|++
T Consensus 6 ~~g~~~p~~~l~~~~g~-~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~---------~~~~v~v~~ 75 (148)
T 3fkf_A 6 TVGKSAPYFSLPNEKGE-KLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK---------NFAMLGISL 75 (148)
T ss_dssp CTTSBCCCCCEEBTTSC-EECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT---------TEEEEEEEC
T ss_pred cCCCcCCCeEeeCCCCC-EEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC---------CeEEEEEEC
Confidence 36999999999 99999 99999 999999999999999999999999999999999 654 799999999
Q ss_pred CCCHHHHHHHHhcCCccccccCCcc---hhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHH
Q 014225 277 DRDQTSFESYFGTMPWLALPFGDPT---IKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFL 353 (428)
Q Consensus 277 d~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L 353 (428)
|.+.+.+++++...+ ++++...|. ...+++.|++.++|+++|||++|+++.+.. ..++|
T Consensus 76 d~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-----------------~~~~l 137 (148)
T 3fkf_A 76 DIDREAWETAIKKDT-LSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI-----------------QGEAL 137 (148)
T ss_dssp CSCHHHHHHHHHHTT-CCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC-----------------CHHHH
T ss_pred CCCHHHHHHHHHHcC-CCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC-----------------CHHHH
Confidence 999999999999877 467766665 779999999999999999999999998852 13566
Q ss_pred HHHHHHHHh
Q 014225 354 EKQMEEEAK 362 (428)
Q Consensus 354 ~~~l~~~~~ 362 (428)
.+.|+++++
T Consensus 138 ~~~l~~ll~ 146 (148)
T 3fkf_A 138 TGKLKELLK 146 (148)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHc
Confidence 777776654
No 24
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.87 E-value=4.7e-22 Score=168.98 Aligned_cols=121 Identities=20% Similarity=0.318 Sum_probs=104.3
Q ss_pred ccccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHH---HHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 36 SLLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVD---VYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 36 ~~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~---l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
|.+|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|.+ +++++++.+ +++++|++|.+.+.+
T Consensus 1 s~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~--~~~v~v~~d~~~~~~ 78 (142)
T 3ewl_A 1 SNAGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGT--LRVLAIYPDENREEW 78 (142)
T ss_dssp CCTTSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTS--EEEEEEECSSCHHHH
T ss_pred CCCCCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCC--eEEEEEEecCCHHHH
Confidence 3579999999 9999999999999999999999999999999999999999 999999876 999999999999999
Q ss_pred HHHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 112 NNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 112 ~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+++++++++......+.+......+.|++.++|++++||+ +|+++..
T Consensus 79 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 125 (142)
T 3ewl_A 79 ATKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDG---RKRVILK 125 (142)
T ss_dssp HHHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECT---TCBEEEC
T ss_pred HHHHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEEECC---CCCEEec
Confidence 9999988753333334442122245999999999999999 9999864
No 25
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.87 E-value=3.4e-22 Score=174.22 Aligned_cols=137 Identities=14% Similarity=0.169 Sum_probs=119.5
Q ss_pred hhccCCCCcc--c-CCCCCceecccccCCcEEEEEEec-cCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEc
Q 014225 201 LLTNHDRGYL--L-GHPPDEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 276 (428)
Q Consensus 201 ~~g~~~p~f~--l-~~~g~~~v~l~~~~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~ 276 (428)
.+|.++|+|+ + +.+|+ .+++++++||+++|+||+ +|||+|..++|.|.+++++|+++ +++||+|++
T Consensus 8 ~~G~~~P~f~~~l~~~~G~-~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~---------~~~vv~vs~ 77 (163)
T 3gkn_A 8 VLELPAATFDLPLSLSGGT-QTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA---------GAKILGVSR 77 (163)
T ss_dssp CCCCCGGGGGCCEECSTTC-EECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT---------TCEEEEEES
T ss_pred ccCCcCCCccccccCCCCC-EEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC---------CCEEEEEeC
Confidence 4699999999 9 99999 999999999999999998 99999999999999999999977 799999999
Q ss_pred CCCHHHHHHHHhcCCccccccCCcchhHHHHhcCcCc------------cceEEEECCCCcEEeccccchhhcccccCCC
Q 014225 277 DRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQG------------IPCLVIIGPEGKTVTKQGRNLINLYQENAYP 344 (428)
Q Consensus 277 d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~------------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p 344 (428)
| +.+.+++|.++++ ++||+..|....+.+.|++.. +|++||||++|+|++.+.. .
T Consensus 78 d-~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~-----------~ 144 (163)
T 3gkn_A 78 D-SVKSHDNFCAKQG-FAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRK-----------V 144 (163)
T ss_dssp S-CHHHHHHHHHHHC-CSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECS-----------C
T ss_pred C-CHHHHHHHHHHhC-CCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcC-----------C
Confidence 8 7888999988776 678888888899999999987 9999999999999987522 1
Q ss_pred CChHHHHHHHHHHHHH
Q 014225 345 FTEAKLEFLEKQMEEE 360 (428)
Q Consensus 345 ~~~~~~~~L~~~l~~~ 360 (428)
.....++++.+.|+++
T Consensus 145 ~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 145 KVAGHADAVLAALKAH 160 (163)
T ss_dssp CSTTHHHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHH
Confidence 2234566777777654
No 26
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.87 E-value=1.4e-23 Score=183.93 Aligned_cols=141 Identities=18% Similarity=0.270 Sum_probs=120.7
Q ss_pred hccCCCCccc-CCCCCceeccccc--CCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSL--VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~--~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
+|+++|+|++ +.+|+ .++++++ +||+++|+|| ++|||+|..++|.|++++++|++. ++.+++||.|
T Consensus 7 vG~~aPdF~l~~~~G~-~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~---------~v~vv~is~d 76 (164)
T 4gqc_A 7 LGEKAPDFTLPNQDFE-PVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA---------NAEVLAISVD 76 (164)
T ss_dssp TTSBCCCCEEEBTTSC-EEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS---------SSEEEEEESS
T ss_pred CCCCCcCcEeECCCCC-EEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc---------CceEEEecCC
Confidence 6999999999 99999 9999998 8999999998 999999999999999999999876 8999999998
Q ss_pred CCHHHHHHHHhcCCccccccCCcchhHHHHhcCcC----------ccceEEEECCCCcEEeccccchhhcccccCCCCCh
Q 014225 278 RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ----------GIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTE 347 (428)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~----------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~ 347 (428)
+.+..++|..+.+ ++||++.|.+.++++.|||. ..|++||||++|+|++++.... +..+
T Consensus 77 -~~~~~~~~~~~~~-~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~---------~~~~ 145 (164)
T 4gqc_A 77 -SPWCLKKFKDENR-LAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDN---------PLNE 145 (164)
T ss_dssp -CHHHHHHHHHHTT-CCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSC---------TTCC
T ss_pred -CHHHHHHHHHhcC-cccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCC---------CCCC
Confidence 6778888888776 68999999999999999983 4689999999999998753321 3344
Q ss_pred HHHHHHHHHHHHHHhc
Q 014225 348 AKLEFLEKQMEEEAKN 363 (428)
Q Consensus 348 ~~~~~L~~~l~~~~~~ 363 (428)
...+++.+++++++.+
T Consensus 146 ~~~~eil~~l~~l~~e 161 (164)
T 4gqc_A 146 PDYDEVVREANKIAGE 161 (164)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcc
Confidence 4567788888877664
No 27
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.87 E-value=7.8e-22 Score=168.71 Aligned_cols=125 Identities=39% Similarity=0.751 Sum_probs=113.4
Q ss_pred hccCCCC-ccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 202 LTNHDRG-YLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 202 ~g~~~p~-f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
++..+|+ |++ +.+| .+++++++||+++|+||++||++|+.++|.|.+++++|++. .++.|++|++|.+
T Consensus 4 ~~~~~P~~f~l~~~~g--~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~--------~~~~vv~v~~d~~ 73 (146)
T 1o8x_A 4 LDKYLPGIEKLRRGDG--EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES--------KNFEVVFCTWDEE 73 (146)
T ss_dssp GGGTSTTCCEEEETTE--EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCCS
T ss_pred hHhhCCCceEEEcCCC--CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc--------CCeEEEEEeCCCC
Confidence 5788999 999 8888 79999999999999999999999999999999999999742 2799999999999
Q ss_pred HHHHHHHHhcCCccccccCC-cchhHHHHhcCcCccceEEEEC-CCCcEEeccccchhh
Q 014225 280 QTSFESYFGTMPWLALPFGD-PTIKELTKYFDVQGIPCLVIIG-PEGKTVTKQGRNLIN 336 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~~ 336 (428)
.+.+++++++++|..+|+.. |....+++.|+|.++|+++||| ++|+++.+.++..+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~ 132 (146)
T 1o8x_A 74 EDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLV 132 (146)
T ss_dssp HHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHT
T ss_pred HHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHHh
Confidence 99999999999999999876 5678899999999999999999 999999998776543
No 28
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.87 E-value=1.2e-21 Score=169.05 Aligned_cols=118 Identities=14% Similarity=0.179 Sum_probs=105.7
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
..|.++|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|+++ ++.|++|++|..
T Consensus 10 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~---------~~~vv~i~~d~~ 79 (152)
T 2lrt_A 10 IKEASIIDIQLKDLKGN-TRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ---------GFEIYQISLDGD 79 (152)
T ss_dssp SCTTCSCCCCEEBTTSC-EECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---------TEEEEEEECSCC
T ss_pred ccCCCCCCeEEEcCCCC-EEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC---------CeEEEEEEccCC
Confidence 45889999999 99999 99999999999999999999999999999999999999876 799999999999
Q ss_pred HHHHHHHHhcCCccccccCCcchhH---HHHhcCcCccceEEEECCCCcEEeccc
Q 014225 280 QTSFESYFGTMPWLALPFGDPTIKE---LTKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
.+.++++.... ++|+..|.... +.+.|++.++|+++|||++|+|+.+..
T Consensus 80 ~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 131 (152)
T 2lrt_A 80 EHFWKTSADNL---PWVCVRDANGAYSSYISLYNVTNLPSVFLVNRNNELSARGE 131 (152)
T ss_dssp HHHHHHHHTTC---SSEEEECSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEETT
T ss_pred HHHHHHHHhCC---CceEEECCCCcchHHHHHcCcccCceEEEECCCCeEEEecC
Confidence 88888888764 45555555554 999999999999999999999999854
No 29
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.87 E-value=1.2e-21 Score=174.89 Aligned_cols=147 Identities=10% Similarity=0.073 Sum_probs=120.3
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC--
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-- 277 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d-- 277 (428)
.+|.++|+|++ +.+|+ .+++++++||++||+||++||++|+.++|.|++++++|+++ +.|++|++|
T Consensus 8 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~----------~~~v~v~~d~~ 76 (188)
T 2cvb_A 8 PLESPLIDAELPDPRGG-RYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK----------VAFVGINANDY 76 (188)
T ss_dssp CTTCBCCCCEEECTTSC-EEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT----------EEEEEEECCCT
T ss_pred CCCCCCCCceeecCCCC-EEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC----------eEEEEEEcCcc
Confidence 35889999999 99999 99999999999999999999999999999999999998743 899999996
Q ss_pred -----CCHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhh-cccccCCCCChHHHH
Q 014225 278 -----RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLIN-LYQENAYPFTEAKLE 351 (428)
Q Consensus 278 -----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~-~~g~~~~p~~~~~~~ 351 (428)
.+.+.+++|+++++ +.+|+..|....+++.|++.++|+++|||++|+|++++..+... ..| +.+ .+
T Consensus 77 ~~~~~d~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g----~~~---~~ 148 (188)
T 2cvb_A 77 EKYPEDAPEKMAAFAEEHG-IFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPS----KVQ---SH 148 (188)
T ss_dssp TTCGGGSHHHHHHHHHHHT-CCSCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGG----GCC---CC
T ss_pred ccccccCHHHHHHHHHHhC-CCceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCcccccc----ccC---HH
Confidence 36788899988877 57888888888999999999999999999999999882211000 001 111 25
Q ss_pred HHHHHHHHHHhcCCC
Q 014225 352 FLEKQMEEEAKNLPR 366 (428)
Q Consensus 352 ~L~~~l~~~~~~~~~ 366 (428)
+|.+.|++++++.+.
T Consensus 149 ~l~~~i~~ll~~~~~ 163 (188)
T 2cvb_A 149 DLEAAIEALLRGEEP 163 (188)
T ss_dssp HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHcCCCC
Confidence 678888888876544
No 30
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.87 E-value=1.9e-21 Score=165.64 Aligned_cols=125 Identities=44% Similarity=0.791 Sum_probs=112.8
Q ss_pred hhccCCCCc-cc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC
Q 014225 201 LLTNHDRGY-LL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 278 (428)
Q Consensus 201 ~~g~~~p~f-~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~ 278 (428)
.+|..+|+| .+ +.+| .+++++++||+++|+||++||++|+.++|.|.++++++++. .++.|++|++|.
T Consensus 3 ~~g~~~p~~~~l~~~~g--~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--------~~~~vv~i~~d~ 72 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG--EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA--------KNFEVVLISWDE 72 (144)
T ss_dssp GGGGTSCTTCCBBCTTS--CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCS
T ss_pred chhhhCccceEeecCCC--cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC--------CCEEEEEEeCCC
Confidence 368899997 89 8888 69999999999999999999999999999999999999732 279999999999
Q ss_pred CHHHHHHHHhcCCccccccCC-cchhHHHHhcCcCccceEEEEC-CCCcEEeccccchh
Q 014225 279 DQTSFESYFGTMPWLALPFGD-PTIKELTKYFDVQGIPCLVIIG-PEGKTVTKQGRNLI 335 (428)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~ 335 (428)
+.+.+++++++++|..+|+.. |....+++.|+|.++|+++||| ++|+++.+.++..+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~ 131 (144)
T 1o73_A 73 NESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRV 131 (144)
T ss_dssp SHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHH
T ss_pred CHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHH
Confidence 999999999999999999876 5678899999999999999999 89999999876554
No 31
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.87 E-value=1.5e-21 Score=169.92 Aligned_cols=140 Identities=18% Similarity=0.281 Sum_probs=117.2
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
..|.++|+|.+ +.+|+ .+++++++||++||+||++||++|+.+.|.|.+++++|++. ++.+++|++|.+
T Consensus 9 ~~g~~~p~~~l~~~~g~-~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~v~~v~v~~d~~ 78 (165)
T 3or5_A 9 ARPTPAPSFSGVTVDGK-PFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR---------GFTFVGIAVNEQ 78 (165)
T ss_dssp CCCCBCCCCEEECTTSC-EEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---------TEEEEEEECSCC
T ss_pred cCCCCCCCceeeCCCCC-EechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC---------CeEEEEEECCCC
Confidence 46899999999 99999 99999999999999999999999999999999999999866 799999999998
Q ss_pred HHHHHHHHhcCCccccccCCcchhHHHHhc------CcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHH
Q 014225 280 QTSFESYFGTMPWLALPFGDPTIKELTKYF------DVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFL 353 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L 353 (428)
.+.+++|+.+.+ +.+|+..+.. .+.+.| ++.++|+++|||++|+++.+..+. .+ .++|
T Consensus 79 ~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~-----------~~---~~~l 142 (165)
T 3or5_A 79 LPNVKNYMKTQG-IIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGP-----------RS---KADF 142 (165)
T ss_dssp HHHHHHHHHHHT-CCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSC-----------CC---HHHH
T ss_pred HHHHHHHHHHcC-CCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCC-----------CC---HHHH
Confidence 999999998776 5667766654 777888 899999999999999999875331 22 3667
Q ss_pred HHHHHHHHhcCCC
Q 014225 354 EKQMEEEAKNLPR 366 (428)
Q Consensus 354 ~~~l~~~~~~~~~ 366 (428)
.+.|+++++....
T Consensus 143 ~~~l~~~l~~~~~ 155 (165)
T 3or5_A 143 DRIVKMALGAKAA 155 (165)
T ss_dssp HHHHHHHHC----
T ss_pred HHHHHHHHhhhcc
Confidence 7778777765543
No 32
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.86 E-value=8e-22 Score=169.80 Aligned_cols=121 Identities=25% Similarity=0.442 Sum_probs=110.6
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
.+|.++|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.++++++++. ++.+++|++|.+
T Consensus 3 ~~G~~~p~~~l~~~~g~-~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~---------~~~~v~v~~d~~ 72 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGE-VVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK---------PFRMLCVSIDEG 72 (154)
T ss_dssp CTTSBCCCCEEECTTSC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS---------SEEEEEEECCTT
T ss_pred CCCCCCCCeEEEcCCCC-EEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC---------CeEEEEEEcCCc
Confidence 46899999999 99999 99999999999999999999999999999999999999865 799999999987
Q ss_pred -HHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEecccc
Q 014225 280 -QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 280 -~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~ 332 (428)
.+.+++++...+ +++|+..|....+.+.|++.++|+++|||++|+++.+..+
T Consensus 73 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g 125 (154)
T 3kcm_A 73 GKVAVEEFFRKTG-FTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVG 125 (154)
T ss_dssp HHHHHHHHHHHHC-CCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEES
T ss_pred chHHHHHHHHHcC-CCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcC
Confidence 788888888776 5688888888999999999999999999999999987543
No 33
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.86 E-value=1.6e-21 Score=167.56 Aligned_cols=139 Identities=18% Similarity=0.290 Sum_probs=120.3
Q ss_pred hccCCC-Cccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 202 LTNHDR-GYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 202 ~g~~~p-~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
.|.++| +|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.++++++++. ++.+++|++|.+
T Consensus 5 ~G~~~p~~f~l~~~~g~-~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~~v~v~~d~~ 74 (152)
T 2lja_A 5 SGNPSAASFSYPDINGK-TVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGK---------DIHFVSLSCDKN 74 (152)
T ss_dssp TTCCCSSSCEEEETTTE-EEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS---------SEEEEEEECCSC
T ss_pred cCCCCCcccEeecCCCC-EeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC---------CeEEEEEEccCc
Confidence 589999 9999 99999 99999999999999999999999999999999999998765 799999999998
Q ss_pred HHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHH
Q 014225 280 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEE 359 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~ 359 (428)
.+.+++++...++..+++..|....+.+.|++.++|+++|||++|+++.+..+. .+ .++|.+.|++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~---~~~l~~~l~~ 140 (152)
T 2lja_A 75 KKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISANMTR-----------PS---DPKTAEKFNE 140 (152)
T ss_dssp HHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCC-----------TT---CHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCC-----------CC---HHHHHHHHHH
Confidence 889999999877655667777788999999999999999999999999985431 12 2566777777
Q ss_pred HHhcC
Q 014225 360 EAKNL 364 (428)
Q Consensus 360 ~~~~~ 364 (428)
++...
T Consensus 141 ~~~~~ 145 (152)
T 2lja_A 141 LLGLE 145 (152)
T ss_dssp HHTCC
T ss_pred Hhccc
Confidence 76644
No 34
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.86 E-value=3.7e-21 Score=178.99 Aligned_cols=117 Identities=9% Similarity=0.156 Sum_probs=98.8
Q ss_pred cccccccCc-cccC-CCC--EEeccc-CCCCEEEEEEe-cCCChhhh-hhHHHHHHHHHHHhcCCCcE-EEEEEecCCCh
Q 014225 37 LLASKDRDY-LLNQ-HGT--QVKVSD-LEGKVTALYFS-ANWYPPCG-NFTGVLVDVYEELRNNGSDF-EVVFVSSDEDL 108 (428)
Q Consensus 37 ~~g~~~pdf-l~~~-~G~--~v~l~~-~~gk~vlv~F~-a~wC~~C~-~~~p~l~~l~~~~~~~~~~~-~ii~vs~D~~~ 108 (428)
.+|+.+|+| |.+. +|+ +++|++ ++||+++|+|| ++||++|+ .++|.|++++++|++.| + ++++||.|. .
T Consensus 4 ~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~--~~~vv~is~d~-~ 80 (241)
T 1nm3_A 4 MEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYG--VDDILVVSVND-T 80 (241)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTT--CCEEEEEESSC-H
T ss_pred cCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEEcCC-H
Confidence 368999999 9886 787 899999 89999999999 99999999 99999999999999887 9 999999985 5
Q ss_pred HHHHHHHhcCCCceec-cCChHHHHHHHhhcCCC-----------CCceEEEEcCCCCCCCccccc
Q 014225 109 NAFNNYRACMPWLAVP-YSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 109 ~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~-----------~~P~~~lid~~~~dG~i~~~~ 162 (428)
+..++|.+++++..+| ..|.+ ..+++.||+. .+|+++|| + +|+|++..
T Consensus 81 ~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~---~G~i~~~~ 140 (241)
T 1nm3_A 81 FVMNAWKEDEKSENISFIPDGN--GEFTEGMGMLVGKEDLGFGKRSWRYSMLV-K---NGVVEKMF 140 (241)
T ss_dssp HHHHHHHHHTTCTTSEEEECTT--SHHHHHTTCEEECTTTTCCEEECCEEEEE-E---TTEEEEEE
T ss_pred HHHHHHHHhcCCCceEEEECCC--cHHHHHhCceeecccccCcccceeEEEEE-E---CCEEEEEE
Confidence 6788898887654233 23544 7899999985 45899999 8 99998764
No 35
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.86 E-value=3e-22 Score=170.65 Aligned_cols=119 Identities=12% Similarity=0.069 Sum_probs=99.1
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYR 115 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~ 115 (428)
.+|..+|+| | +.+|+++++++++||+++|+||++||++|+.++|.|++++++|++.+ +++++|++|.+.+.+++++
T Consensus 8 ~~G~~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~--~~vv~vs~d~~~~~~~~~~ 84 (143)
T 4fo5_A 8 NPGDLAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDK--IAMCSISMDEKESIFTETV 84 (143)
T ss_dssp STTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTT--EEEEEEECCSCHHHHHHHH
T ss_pred CCcccCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCC--EEEEEEEccCCHHHHHHHH
Confidence 468999999 9 99999999999999999999999999999999999999999998876 9999999999999999999
Q ss_pred hcCC--C-ceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCccccc
Q 014225 116 ACMP--W-LAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 116 ~~~~--~-~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~~ 162 (428)
++++ | ..+.. .......+.+.|++.++|+++|||+ +|+++.+.
T Consensus 85 ~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~ 130 (143)
T 4fo5_A 85 KIDKLDLSTQFHE-GLGKESELYKKYDLRKGFKNFLIND---EGVIIAAN 130 (143)
T ss_dssp HHHTCCGGGEEEC-TTGGGSHHHHHTTGGGCCCEEEECT---TSBEEEES
T ss_pred HHhCCCCceeeec-ccccchHHHHHcCCCCCCcEEEECC---CCEEEEcc
Confidence 9755 4 22222 1222268999999999999999999 99998764
No 36
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.86 E-value=2.5e-21 Score=167.11 Aligned_cols=120 Identities=18% Similarity=0.344 Sum_probs=106.2
Q ss_pred ccccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHH
Q 014225 36 SLLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 36 ~~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
...|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|++++++|++.+ +++++|++|...+.++++
T Consensus 9 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~--~~vv~i~~d~~~~~~~~~ 86 (152)
T 2lrt_A 9 KIKEASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQG--FEIYQISLDGDEHFWKTS 86 (152)
T ss_dssp SSCTTCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT--EEEEEEECSCCHHHHHHH
T ss_pred hccCCCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCC--eEEEEEEccCCHHHHHHH
Confidence 3468899999 9999999999999999999999999999999999999999999999887 999999999999889999
Q ss_pred HhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 115 RACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 115 ~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..+++|..+...+.. ...+.+.|++.++|+++|||+ +|+++..
T Consensus 87 ~~~~~~~~~~d~~~~-~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 129 (152)
T 2lrt_A 87 ADNLPWVCVRDANGA-YSSYISLYNVTNLPSVFLVNR---NNELSAR 129 (152)
T ss_dssp HTTCSSEEEECSSGG-GCHHHHHHTCCSCSEEEEEET---TTEEEEE
T ss_pred HhCCCceEEECCCCc-chHHHHHcCcccCceEEEECC---CCeEEEe
Confidence 888887655442221 135899999999999999999 9999866
No 37
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.86 E-value=2.3e-21 Score=166.72 Aligned_cols=142 Identities=20% Similarity=0.261 Sum_probs=121.0
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC-
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 278 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~- 278 (428)
++|.++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.++++++++. ++.|++|+.+.
T Consensus 3 ~~G~~~p~~~l~~~~g~-~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~~~~ 72 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGK-TVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK---------NFQVLAVAQPID 72 (153)
T ss_dssp -CCTTCCSCEEECTTSC-EEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT---------TEEEEEEECTTS
T ss_pred CCCCCCCCcEeecCCCC-CccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC---------CeEEEEEecCCC
Confidence 46999999999 99999 99999999999999999999999999999999999999876 79999999863
Q ss_pred CHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHH
Q 014225 279 DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQME 358 (428)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~ 358 (428)
+.+.+++|....+ +.+++..|....+.+.|++.++|+++|||++|+++.+..+. ...++|.+.|+
T Consensus 73 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~--------------~~~~~l~~~l~ 137 (153)
T 2l5o_A 73 PIESVRQYVKDYG-LPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGE--------------PDFGKLYQEID 137 (153)
T ss_dssp CHHHHHHHHHHTT-CCSEEEECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESS--------------CCHHHHHHHHH
T ss_pred CHHHHHHHHHHcC-CCceEEcCchHHHHHHcCCCccCeEEEECCCCcEEEEEcCC--------------CCHHHHHHHHH
Confidence 5678888888776 56777777788999999999999999999999998764321 12367888888
Q ss_pred HHHhcCCCC
Q 014225 359 EEAKNLPRS 367 (428)
Q Consensus 359 ~~~~~~~~~ 367 (428)
+++.....+
T Consensus 138 ~ll~~~~~~ 146 (153)
T 2l5o_A 138 TAWRNSDAE 146 (153)
T ss_dssp HHHHCCSSC
T ss_pred HHHHhhhhc
Confidence 888865443
No 38
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.85 E-value=4.3e-21 Score=170.58 Aligned_cols=136 Identities=12% Similarity=0.082 Sum_probs=117.0
Q ss_pred hccCCCCccc-CC--CCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCE------EEE
Q 014225 202 LTNHDRGYLL-GH--PPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDF------EVV 272 (428)
Q Consensus 202 ~g~~~p~f~l-~~--~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~------~iv 272 (428)
.|.++|+|.+ +. +|+ .+++++++||++||+||++||++|+.++|.|.+++++|+++ ++ .|+
T Consensus 33 ~g~~~p~f~l~~~~~~g~-~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~~~~~v~~v 102 (183)
T 3lwa_A 33 DRQQLPDIGGDSLMEEGT-QINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA---------GNGDTPGGTVL 102 (183)
T ss_dssp GCCCCCCCEEEBSSSTTC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC---------C---CCSEEEE
T ss_pred cCCCCCceeccccccCCc-EecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc---------CCCccCCcEEE
Confidence 4889999999 99 999 99999999999999999999999999999999999999876 56 999
Q ss_pred EEEcCC-CHHHHHHHHhcCCccccccCCcchhHHHHhc---CcCccceEEEECCCCcEEeccccchhhcccccCCCCChH
Q 014225 273 FVSTDR-DQTSFESYFGTMPWLALPFGDPTIKELTKYF---DVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEA 348 (428)
Q Consensus 273 ~is~d~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~ 348 (428)
+|++|. +.+.+++|+.+++ +.+|+..|....+.+.| ++.++|+++|||++|+++.+..+. .+
T Consensus 103 ~v~~d~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~-- 168 (183)
T 3lwa_A 103 GINVRDYSRDIAQDFVTDNG-LDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFLRE-----------VT-- 168 (183)
T ss_dssp EEECSCCCHHHHHHHHHHTT-CCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEECSC-----------CC--
T ss_pred EEECCCCCHHHHHHHHHHcC-CCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEcCC-----------CC--
Confidence 999998 7899999999887 56888788778888877 489999999999999999875431 22
Q ss_pred HHHHHHHHHHHHHh
Q 014225 349 KLEFLEKQMEEEAK 362 (428)
Q Consensus 349 ~~~~L~~~l~~~~~ 362 (428)
.++|.+.|+++++
T Consensus 169 -~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 169 -SKDVLDVALPLVD 181 (183)
T ss_dssp -HHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHh
Confidence 3566777777765
No 39
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.85 E-value=3.6e-21 Score=165.50 Aligned_cols=136 Identities=16% Similarity=0.245 Sum_probs=108.2
Q ss_pred cCCCCcccCCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHH
Q 014225 204 NHDRGYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSF 283 (428)
Q Consensus 204 ~~~p~f~l~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~ 283 (428)
.++|+|.+..+|+ .+++++++||++||+||++||++|+.++|.|.+++++|++. ++.|++|++| +.+.+
T Consensus 3 ~pa~~~~~~~~G~-~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~---------~v~vv~v~~d-~~~~~ 71 (151)
T 3raz_A 3 LSADELAGWKDNT-PQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG---------SVDMVGIALD-TSDNI 71 (151)
T ss_dssp ----CEEETTTCC-EECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT---------TEEEEEEESS-CHHHH
T ss_pred CCcchhhcccCCC-EecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC---------CeEEEEEECC-ChHHH
Confidence 3455565568999 99999999999999999999999999999999999999655 7999999998 56788
Q ss_pred HHHHhcCCccccccCC---cchhHHHHhcC--cCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHH
Q 014225 284 ESYFGTMPWLALPFGD---PTIKELTKYFD--VQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQME 358 (428)
Q Consensus 284 ~~~~~~~~~~~~~~~~---d~~~~~~~~~~--v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~ 358 (428)
++|+++.+ +.+|... +....+.+.|+ +.++|+++|||++|+++.+..+. .+ .++|.+.|+
T Consensus 72 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~---~~~l~~~l~ 136 (151)
T 3raz_A 72 GNFLKQTP-VSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGE-----------VN---EKSLTDAVK 136 (151)
T ss_dssp HHHHHHSC-CSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEECCSC-----------CC---HHHHHHHHH
T ss_pred HHHHHHcC-CCCceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEEECCC-----------CC---HHHHHHHHH
Confidence 99999876 5566543 34678999999 99999999999999999885432 22 356677777
Q ss_pred HHHhcCC
Q 014225 359 EEAKNLP 365 (428)
Q Consensus 359 ~~~~~~~ 365 (428)
++.++.+
T Consensus 137 ~l~~~~~ 143 (151)
T 3raz_A 137 LAHSKCR 143 (151)
T ss_dssp HHHTC--
T ss_pred HHHHHhh
Confidence 7766543
No 40
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.85 E-value=1.2e-21 Score=173.91 Aligned_cols=136 Identities=18% Similarity=0.123 Sum_probs=115.6
Q ss_pred ccCCCCccc-CCCCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCH
Q 014225 203 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 280 (428)
Q Consensus 203 g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~ 280 (428)
|.++|+|++ +.+|+ .+++++++||++||+|| ++||++|..++|.|++++++|+++ +++|++|++| +.
T Consensus 28 g~~aP~f~l~~~~G~-~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~---------~~~vv~Vs~D-~~ 96 (179)
T 3ixr_A 28 NHSLLNHPLMLSGST-CKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI---------NATVLGVSRD-SV 96 (179)
T ss_dssp CHHHHHCCEEEGGGE-EECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT---------TEEEEEEESC-CH
T ss_pred CCcCCCeeEECCCCC-EEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEEEcCC-CH
Confidence 444999999 99999 99999999999999999 899999999999999999999877 8999999998 56
Q ss_pred HHHHHHHhcCCccccccCCcchhHHHHhcCcCc------------cceEEEECCCCcEEeccccchhhcccccCCCCChH
Q 014225 281 TSFESYFGTMPWLALPFGDPTIKELTKYFDVQG------------IPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEA 348 (428)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~------------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~ 348 (428)
+..++|.++.+ ++||++.|....+++.|++.. .|++||||++|+|++.... .....
T Consensus 97 ~~~~~~~~~~~-~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~-----------~~~~~ 164 (179)
T 3ixr_A 97 KSHDSFCAKQG-FTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQ-----------VKVPG 164 (179)
T ss_dssp HHHHHHHHHHT-CCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECS-----------CCSTT
T ss_pred HHHHHHHHHcC-CceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcC-----------CCCCC
Confidence 77888888766 678888888899999999954 6899999999999987521 12344
Q ss_pred HHHHHHHHHHHHH
Q 014225 349 KLEFLEKQMEEEA 361 (428)
Q Consensus 349 ~~~~L~~~l~~~~ 361 (428)
.++++.+.|+++.
T Consensus 165 ~~~~il~~l~~l~ 177 (179)
T 3ixr_A 165 HAEEVLNKLKAHA 177 (179)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 5677777777654
No 41
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=6.2e-21 Score=163.87 Aligned_cols=121 Identities=16% Similarity=0.225 Sum_probs=105.4
Q ss_pred cccccccCc-cccCCCCEEecc--cCCCCEEEEEEecCCChh--hhhhHHHHHHHHHHH-hcCCCcEEEEEEecCCChHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVS--DLEGKVTALYFSANWYPP--CGNFTGVLVDVYEEL-RNNGSDFEVVFVSSDEDLNA 110 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~--~~~gk~vlv~F~a~wC~~--C~~~~p~l~~l~~~~-~~~~~~~~ii~vs~D~~~~~ 110 (428)
.+|..+|+| |.+.+|++++++ +++||+++|+||++||++ |+.++|.|++++++| ++.+ +++++|++|.+.+.
T Consensus 6 ~~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~--~~~v~v~~d~~~~~ 83 (150)
T 3fw2_A 6 EIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKY--IGMLGISLDVDKQQ 83 (150)
T ss_dssp STTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSS--EEEEEEECCSCHHH
T ss_pred cCCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCC--eEEEEEEcCCCHHH
Confidence 369999999 999999999999 999999999999999999 999999999999999 7766 99999999999899
Q ss_pred HHHHHhcCCCceeccCCh-HHHHHHHhhcCCCCCceEEEEcCCCCCCCccccc
Q 014225 111 FNNYRACMPWLAVPYSDL-ETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 111 ~~~~~~~~~~~~~~~~d~-~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~~ 162 (428)
+++++++++.....+.+. .....+.+.|++.++|+++|||+ +|+++...
T Consensus 84 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~ 133 (150)
T 3fw2_A 84 WKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSS---DGKILAKN 133 (150)
T ss_dssp HHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECT---TSBEEEES
T ss_pred HHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEECC---CCEEEEcc
Confidence 999999766422222232 11268999999999999999999 99998764
No 42
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.85 E-value=3.2e-21 Score=168.25 Aligned_cols=116 Identities=16% Similarity=0.283 Sum_probs=107.5
Q ss_pred hhhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC-
Q 014225 200 NLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 277 (428)
Q Consensus 200 ~~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d- 277 (428)
..+|.++|+|.+ +.+|+ .+++++++||++||+||++||++|+.++|.|.+++++++ ++.|++|++|
T Consensus 11 ~~~g~~~p~~~l~~~~g~-~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-----------~v~vv~i~~d~ 78 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGE-VISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-----------EISVIAIDFWT 78 (165)
T ss_dssp HHHHHHHHCCCEEBTTSC-EECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-----------TEEEEEEECCS
T ss_pred ccccCcCCCCEeecCCCC-EeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-----------CcEEEEEEecc
Confidence 346889999999 99999 999999999999999999999999999999999999886 4899999999
Q ss_pred -----------------CCHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEe
Q 014225 278 -----------------RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVT 328 (428)
Q Consensus 278 -----------------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~ 328 (428)
.+.+.+++|.+.+++.++|+..| ...+.+.|++.++|+++|||++|+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 79 AEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp HHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred cccccccccccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 78899999999888558888888 889999999999999999999999998
No 43
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.84 E-value=7.4e-21 Score=169.41 Aligned_cols=140 Identities=19% Similarity=0.312 Sum_probs=117.9
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC-
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD- 279 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~- 279 (428)
.|.++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.++|.|++++++|++. ++.|++|++|.+
T Consensus 36 ~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~d~~~ 105 (186)
T 1jfu_A 36 APLKLPDLAFEDADGK-PKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGP---------NFEVVAINIDTRD 105 (186)
T ss_dssp SCCBCCCCEEECTTSC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT---------TEEEEEEECCCSC
T ss_pred CCCcCCCcEeEcCCCC-EeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC---------CcEEEEEECCCCC
Confidence 4889999999 99999 99999999999999999999999999999999999999755 799999999964
Q ss_pred HHHHHHHHhcCCccccccCCcchhHHHHhcCcC----ccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHH
Q 014225 280 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ----GIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEK 355 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~----~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~ 355 (428)
.+.+++|..+++...+|+..|....+.+.|++. ++|+++|||++|+|+.+..+.. +.+ .++|.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~---------~~~---~~~l~~ 173 (186)
T 1jfu_A 106 PEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPA---------EWA---SEDALK 173 (186)
T ss_dssp TTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCC---------CTT---SHHHHH
T ss_pred HHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCC---------ccC---HHHHHH
Confidence 567888988888657888888888999999985 8999999999999998753311 111 256677
Q ss_pred HHHHHHhc
Q 014225 356 QMEEEAKN 363 (428)
Q Consensus 356 ~l~~~~~~ 363 (428)
.|++++++
T Consensus 174 ~l~~ll~~ 181 (186)
T 1jfu_A 174 LIRAATGK 181 (186)
T ss_dssp HHHHHHC-
T ss_pred HHHHHhcc
Confidence 77777654
No 44
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.84 E-value=7.9e-21 Score=170.57 Aligned_cols=147 Identities=13% Similarity=0.165 Sum_probs=121.7
Q ss_pred hccCCCCccc--CCCCCceecccccCCc-EEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC-
Q 014225 202 LTNHDRGYLL--GHPPDEKVPVSSLVGK-TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 277 (428)
Q Consensus 202 ~g~~~p~f~l--~~~g~~~v~l~~~~gk-~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d- 277 (428)
+|.++|+|.+ +.+|+ .+++++++|| ++||+||++||++|+.++|.|.+++++|+++ ++.|++|++|
T Consensus 20 ~g~~~p~f~l~~~~~G~-~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~v~~d~ 89 (196)
T 2ywi_A 20 LGKQAPPFALTNVIDGN-VVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK---------GVSFVAINSND 89 (196)
T ss_dssp TTCBCCCCEEEETTTCC-EEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG---------TCEEEEEECSC
T ss_pred cCCcCCceeeeecCCCC-EEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC---------CcEEEEEECCc
Confidence 5889999998 68999 9999999998 5999999999999999999999999999876 7999999997
Q ss_pred ------CCHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhh--cccccCCCCChHH
Q 014225 278 ------RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLIN--LYQENAYPFTEAK 349 (428)
Q Consensus 278 ------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~--~~g~~~~p~~~~~ 349 (428)
.+.+.+++|+..++ +++|+..|....+++.|++.++|+++|||++|++++++..+... ..| +.+
T Consensus 90 ~~~~~~d~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g----~~~--- 161 (196)
T 2ywi_A 90 AEQYPEDSPENMKKVAEELG-YPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGI----PVT--- 161 (196)
T ss_dssp TTTCGGGSHHHHHHHHHHHT-CCSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCC----CCC---
T ss_pred cccccccCHHHHHHHHHHcC-CCceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccC----ccC---
Confidence 46788999998877 57888888888999999999999999999999999884322110 011 112
Q ss_pred HHHHHHHHHHHHhcCCC
Q 014225 350 LEFLEKQMEEEAKNLPR 366 (428)
Q Consensus 350 ~~~L~~~l~~~~~~~~~ 366 (428)
.++|.+.|++++++.+.
T Consensus 162 ~~~l~~~i~~ll~~~~~ 178 (196)
T 2ywi_A 162 GESIRAALDALLEGRPV 178 (196)
T ss_dssp CHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 36778888888876544
No 45
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.84 E-value=3.8e-21 Score=171.85 Aligned_cols=141 Identities=12% Similarity=0.156 Sum_probs=115.9
Q ss_pred hhccCCCCccc-CC-CC--CceecccccCCcEEEEEEec-cCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 201 LLTNHDRGYLL-GH-PP--DEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 201 ~~g~~~p~f~l-~~-~g--~~~v~l~~~~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
.+|.++|+|++ +. +| + .+++++++||++||+||+ +|||+|..++|.|++++++|+++ +++||+|+
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~-~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~---------~v~vv~Is 71 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFI-EVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL---------GVDVYSVS 71 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEE-EEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT---------TEEEEEEE
T ss_pred CCCCcCCCcEeecccCCcce-EEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 36899999999 88 58 8 999999999999999995 99999999999999999999876 79999999
Q ss_pred cCCCHHHHHHHHhcCC---ccccccCCcchhHHHHhcCcC------ccceEEEECCCCcEEeccccchhhcccccCCCCC
Q 014225 276 TDRDQTSFESYFGTMP---WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFT 346 (428)
Q Consensus 276 ~d~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~ 346 (428)
+| +.+..++|.++++ .++||++.|....+++.||+. .+|++||||++|+|++++.+.. . .
T Consensus 72 ~d-~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~-------~---~ 140 (186)
T 1n8j_A 72 TD-THFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAE-------G---I 140 (186)
T ss_dssp SS-CHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT-------T---B
T ss_pred CC-CHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecCC-------C---C
Confidence 98 5677888888772 367888888889999999997 3799999999999999864321 0 0
Q ss_pred hHHHHHHHHHHHHHHh
Q 014225 347 EAKLEFLEKQMEEEAK 362 (428)
Q Consensus 347 ~~~~~~L~~~l~~~~~ 362 (428)
....++|.+.|+++..
T Consensus 141 ~~~~~~l~~~l~~l~~ 156 (186)
T 1n8j_A 141 GRDASDLLRKIKAAQY 156 (186)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 1124566666766543
No 46
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.84 E-value=2.8e-21 Score=172.75 Aligned_cols=138 Identities=13% Similarity=0.145 Sum_probs=109.1
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC---
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD--- 277 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d--- 277 (428)
.+.++|+|++ +.+|+ .+++++++||+|||+||++|||+|..++|.|.+++++|+++ +++||+|++|
T Consensus 22 ~~~~~p~f~l~d~~G~-~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~---------~~~vi~is~d~~~ 91 (187)
T 3dwv_A 22 AASSIFDFEVLDADHK-PYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ---------GFTVLAFPSNQFG 91 (187)
T ss_dssp TCCSGGGSCCBBTTSC-BCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG---------TCEEEEEEBCCCS
T ss_pred CCCccCCeEEEcCCCC-EeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC---------CeEEEEEECcccC
Confidence 3678999999 99999 99999999999999999999999999999999999999877 7999999998
Q ss_pred ----CCHHHHHHHHhcCCccccccCC--cchhH----HH--------HhcCcCccc---eEEEECCCCcEEeccccchhh
Q 014225 278 ----RDQTSFESYFGTMPWLALPFGD--PTIKE----LT--------KYFDVQGIP---CLVIIGPEGKTVTKQGRNLIN 336 (428)
Q Consensus 278 ----~~~~~~~~~~~~~~~~~~~~~~--d~~~~----~~--------~~~~v~~~P---~~~lid~~G~i~~~~~~~~~~ 336 (428)
.+.+++++|++..-.++||+.. |.... +. ..|++..+| ++||||++|+|+.+..+.
T Consensus 92 ~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~--- 168 (187)
T 3dwv_A 92 GQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPG--- 168 (187)
T ss_dssp SCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTT---
T ss_pred CCCCCCHHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCC---
Confidence 3567899998854336677664 22222 11 445677888 999999999999985432
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHhc
Q 014225 337 LYQENAYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 337 ~~g~~~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
.+ .++|.+.|++++++
T Consensus 169 --------~~---~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 169 --------AS---VKDIEEKLIPLLGS 184 (187)
T ss_dssp --------CC---HHHHHHHHHHHC--
T ss_pred --------CC---HHHHHHHHHHHHhc
Confidence 12 24577777777653
No 47
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.84 E-value=8.8e-21 Score=163.27 Aligned_cols=120 Identities=19% Similarity=0.315 Sum_probs=104.8
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYR 115 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~ 115 (428)
.+|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|+++++++++.+ +++++|++|.+.+.+++++
T Consensus 4 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~d~~~~~~~~~~ 81 (152)
T 2lrn_A 4 ATGSVAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKG--FTIYGVSTDRREEDWKKAI 81 (152)
T ss_dssp CTTEECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTT--EEEEEEECCSCHHHHHHHH
T ss_pred cCCCcCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCC--eEEEEEEccCCHHHHHHHH
Confidence 368899999 9999999999999999999999999999999999999999999999876 9999999999999999999
Q ss_pred hcCC--CceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCccccc
Q 014225 116 ACMP--WLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 116 ~~~~--~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~~ 162 (428)
++++ |..+.. .......+.+.|++.++|++++||+ +|+++...
T Consensus 82 ~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~ 126 (152)
T 2lrn_A 82 EEDKSYWNQVLL-QKDDVKDVLESYCIVGFPHIILVDP---EGKIVAKE 126 (152)
T ss_dssp HHHTCCSEEEEE-CHHHHHHHHHHTTCCSSCEEEEECT---TSEEEEEC
T ss_pred HHhCCCCeEEec-ccchhHHHHHHhCCCcCCeEEEECC---CCeEEEee
Confidence 8754 433322 1112378999999999999999999 99998764
No 48
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.84 E-value=1.3e-20 Score=166.66 Aligned_cols=117 Identities=16% Similarity=0.181 Sum_probs=104.1
Q ss_pred hhccCCCCccc-CCCC--CceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 201 LLTNHDRGYLL-GHPP--DEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g--~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
.+|.++|+|++ +.+| . .+++++++||++||+||++||++|+.++|.|++++++ ++.|++|++|
T Consensus 31 ~~G~~~P~f~l~~~~g~~~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-------------~v~vv~vs~~ 96 (176)
T 3kh7_A 31 LIGKPFPAFDLPSVQDPAR-RLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ-------------GVVIYGINYK 96 (176)
T ss_dssp TTTSBCCCCEEEBSSCTTS-EEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-------------TCEEEEEEES
T ss_pred ccCCcCCCcEecccCCCCc-eecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC-------------CCEEEEEeCC
Confidence 46999999999 9998 7 8999999999999999999999999999999988764 3899999999
Q ss_pred CCHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccc
Q 014225 278 RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
.+.+.+++|+.+.++....+..|....+++.|++.++|++||||++|+|+++..
T Consensus 97 d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 150 (176)
T 3kh7_A 97 DDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIV 150 (176)
T ss_dssp CCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEEE
T ss_pred CCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCCeEEEECCCCeEEEEEc
Confidence 899999999998874333346677889999999999999999999999998753
No 49
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.84 E-value=6.2e-21 Score=175.05 Aligned_cols=141 Identities=16% Similarity=0.197 Sum_probs=117.4
Q ss_pred hhccCCCCccc-CC--CC--Cceeccccc-CCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEE
Q 014225 201 LLTNHDRGYLL-GH--PP--DEKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVF 273 (428)
Q Consensus 201 ~~g~~~p~f~l-~~--~g--~~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~ 273 (428)
.+|.++|+|++ +. +| + .++++++ +||+|||+|| ++|||+|+.++|.|.+++++|+++ +++||+
T Consensus 26 ~~G~~aP~F~l~~~~~~G~~~-~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~---------~v~vv~ 95 (221)
T 2c0d_A 26 LVTKKAYNFTAQGLNKNNEII-NVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK---------NVELLG 95 (221)
T ss_dssp CTTSBCCCCEEEEECTTSCEE-EEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT---------TEEEEE
T ss_pred CCCCCCCCeEEeccccCCCcc-EEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEE
Confidence 46999999999 88 89 8 9999999 9999999999 999999999999999999999876 799999
Q ss_pred EEcCCCHHHHHHHHhcCC------ccccccCCcchhHHHHhcCc-----CccceEEEECCCCcEEeccccchhhcccccC
Q 014225 274 VSTDRDQTSFESYFGTMP------WLALPFGDPTIKELTKYFDV-----QGIPCLVIIGPEGKTVTKQGRNLINLYQENA 342 (428)
Q Consensus 274 is~d~~~~~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~v-----~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~ 342 (428)
|++| +.+..++|.+... .++||++.|....+++.|++ ..+|++||||++|+|+++..+.. .
T Consensus 96 Is~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~-------~ 167 (221)
T 2c0d_A 96 ISVD-SVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDL-------P 167 (221)
T ss_dssp EESS-CHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECT-------T
T ss_pred EeCC-CHHHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCcccCCCccceEEEECCCCeEEEEEecCC-------C
Confidence 9998 5667888888761 46788888888899999999 47999999999999999853321 1
Q ss_pred CCCChHHHHHHHHHHHHHHh
Q 014225 343 YPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 343 ~p~~~~~~~~L~~~l~~~~~ 362 (428)
.....+++.+.|+++..
T Consensus 168 ---~~~~~~ell~~l~~L~~ 184 (221)
T 2c0d_A 168 ---IGRNVQEVLRTIDSIIH 184 (221)
T ss_dssp ---CCCCHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHhh
Confidence 11234666666766553
No 50
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.84 E-value=1.9e-20 Score=162.86 Aligned_cols=138 Identities=17% Similarity=0.336 Sum_probs=113.1
Q ss_pred CCCCccc-CCCCCceecccccCCcEEEEEEeccCChh-HHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC---C
Q 014225 205 HDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---D 279 (428)
Q Consensus 205 ~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~-C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~---~ 279 (428)
.+|+|++ +.+|+ .+++++++||++||+||++||++ |..++|.|++++++|++.. ...++++++|++|. +
T Consensus 2 ~ap~f~l~~~~G~-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~-----~~~~~~vv~vs~d~~~d~ 75 (164)
T 2ggt_A 2 LGGPFSLTTHTGE-RKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSIT-----TLPDLTPLFISIDPERDT 75 (164)
T ss_dssp CCCCCEEEETTSC-EEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSS-----SSCCEEEEEEESCTTTCC
T ss_pred CCCCeEEEeCCCC-EEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhcc-----CCCcEEEEEEEeCCCCCC
Confidence 4799999 99999 99999999999999999999998 9999999999999998610 01279999999986 3
Q ss_pred HHHHHHHHhcCCccccccC---CcchhHHHHhcCcCccc---------------eEEEECCCCcEEeccccchhhccccc
Q 014225 280 QTSFESYFGTMPWLALPFG---DPTIKELTKYFDVQGIP---------------CLVIIGPEGKTVTKQGRNLINLYQEN 341 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~v~~~P---------------~~~lid~~G~i~~~~~~~~~~~~g~~ 341 (428)
.+.+++|.++++ .+++++ .|....+++.|++..+| +++|||++|+++.+..+.
T Consensus 76 ~~~~~~~~~~~~-~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~-------- 146 (164)
T 2ggt_A 76 KEAIANYVKEFS-PKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQN-------- 146 (164)
T ss_dssp HHHHHHHHHTTC-SSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETT--------
T ss_pred HHHHHHHHHHcC-CCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCC--------
Confidence 678999998776 455554 35567799999999999 899999999999985431
Q ss_pred CCCCChHHHHHHHHHHHHHHhc
Q 014225 342 AYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 342 ~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
.+ .++|.+.|+++++.
T Consensus 147 ---~~---~~~l~~~l~~ll~~ 162 (164)
T 2ggt_A 147 ---KR---KGEIAASIATHMRP 162 (164)
T ss_dssp ---CC---HHHHHHHHHHHHGG
T ss_pred ---CC---HHHHHHHHHHHHHh
Confidence 12 26677788877764
No 51
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.84 E-value=9.7e-21 Score=158.79 Aligned_cols=113 Identities=18% Similarity=0.248 Sum_probs=104.7
Q ss_pred ccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHH
Q 014225 203 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 281 (428)
Q Consensus 203 g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~ 281 (428)
|.++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++ ++.+++|++|.+.+
T Consensus 2 ~~~~p~~~~~~~~g~-~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~~~ 69 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGH-DFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-----------EVTFVGVAGLDQVP 69 (136)
T ss_dssp CCGGGCCEEEBTTSC-EEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSSCHH
T ss_pred CCCCCCcccccCCCC-EeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-----------CeEEEEEeCCCCHH
Confidence 567899999 99999 999999999999999999999999999999999998875 48999999999999
Q ss_pred HHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEE
Q 014225 282 SFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 327 (428)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~ 327 (428)
.++++...++...+|+..|....+.+.|++.++|+++|||++|+++
T Consensus 70 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 70 AMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp HHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE
T ss_pred HHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE
Confidence 9999999888558888888889999999999999999999999998
No 52
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.84 E-value=1.1e-20 Score=160.52 Aligned_cols=119 Identities=20% Similarity=0.377 Sum_probs=107.8
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC-
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 278 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~- 278 (428)
.+|.++|+|.+ +.+|. .+++++ +||+++|+||++||++|+.++|.|.+++++++.. ++.+++|++|.
T Consensus 10 ~~g~~~p~~~l~~~~g~-~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~---------~~~~v~v~~d~~ 78 (145)
T 3erw_A 10 KQPAVPAVFLMKTIEGE-DISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD---------SVKLVTVNLVNS 78 (145)
T ss_dssp --CCSCCEEEEECTTSC-EEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS---------SEEEEEEECGGG
T ss_pred cCCCcCCCceeecCCCC-EEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC---------CEEEEEEEccCC
Confidence 46999999999 99999 999999 9999999999999999999999999999998754 79999999986
Q ss_pred --CHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccc
Q 014225 279 --DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 279 --~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
+.+.+++|....+ +.+|+..|....+++.|++.++|+++|||++|+++.+..
T Consensus 79 ~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 132 (145)
T 3erw_A 79 EQNQQVVEDFIKANK-LTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTKI 132 (145)
T ss_dssp SSCHHHHHHHHHHTT-CCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEEE
T ss_pred cCCHHHHHHHHHHcC-CceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEEc
Confidence 7889999998876 578888888889999999999999999999999998743
No 53
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.84 E-value=1.8e-20 Score=157.09 Aligned_cols=116 Identities=24% Similarity=0.401 Sum_probs=105.0
Q ss_pred CCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEE-----cCC
Q 014225 205 HDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS-----TDR 278 (428)
Q Consensus 205 ~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is-----~d~ 278 (428)
++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.++|.|.++++++.. ++.+++|. .+.
T Consensus 1 ~~p~f~l~~~~g~-~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~v~i~~~~~~~~~ 69 (138)
T 4evm_A 1 EVADFELMGVDGK-TYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD----------DYVVLTVVSPGHKGEQ 69 (138)
T ss_dssp CCCCCEEEBTTSC-EEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT----------TEEEEEEECTTSTTCC
T ss_pred CCCcceeECCCCC-EEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC----------CcEEEEEEcCCCCchh
Confidence 4799999 99999 9999999999999999999999999999999999988543 58999994 455
Q ss_pred CHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccc
Q 014225 279 DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
+.+.+++++...++..+++..|....+.+.|++.++|+++|||++|+++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 122 (138)
T 4evm_A 70 SEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHP 122 (138)
T ss_dssp CHHHHHHHHTTCCCTTCCEEECTTCHHHHHTTCCSSSEEEEECTTCCEEEEEE
T ss_pred hHHHHHHHHhhcCCCCeeEEECcchHHHHHcCcccCCeEEEECCCCcEEEeec
Confidence 78899999999987789998888899999999999999999999999998754
No 54
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.84 E-value=1.4e-20 Score=160.33 Aligned_cols=136 Identities=17% Similarity=0.175 Sum_probs=116.5
Q ss_pred hccCCCCccc---CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC
Q 014225 202 LTNHDRGYLL---GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 278 (428)
Q Consensus 202 ~g~~~p~f~l---~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~ 278 (428)
+|.++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++++ +.+++|++|.
T Consensus 3 ~g~~~P~f~~~~~~~~g~-~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~----------~~~~~v~~~~ 71 (148)
T 2b5x_A 3 LRQPMPELTGEKAWLNGE-VTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ----------LNVVAVHMPR 71 (148)
T ss_dssp TTCBCCCCCCCSEEESCC-CCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------SEEEEEECCC
T ss_pred CCCCCCCCccccccccCc-ccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC----------cEEEEEEcCC
Confidence 5889999987 57899 99999999999999999999999999999999999998743 8999999986
Q ss_pred -----CHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHH
Q 014225 279 -----DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFL 353 (428)
Q Consensus 279 -----~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L 353 (428)
+.+.+++++.+.+ +.+|+..|....+++.|++.++|+++|||++|+++.+..+. .+ .++|
T Consensus 72 ~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~---~~~l 136 (148)
T 2b5x_A 72 SEDDLDPGKIKETAAEHD-ITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGG-----------SG---MKML 136 (148)
T ss_dssp STTTSSHHHHHHHHHHTT-CCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESC-----------ST---THHH
T ss_pred CccccCHHHHHHHHHHcC-CCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCC-----------CC---HHHH
Confidence 6788999999887 57888888888999999999999999999999999874331 11 2566
Q ss_pred HHHHHHHHhc
Q 014225 354 EKQMEEEAKN 363 (428)
Q Consensus 354 ~~~l~~~~~~ 363 (428)
.+.|+++++.
T Consensus 137 ~~~l~~~l~~ 146 (148)
T 2b5x_A 137 EKRVNRVLAE 146 (148)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 7777777653
No 55
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.84 E-value=5.9e-21 Score=165.75 Aligned_cols=120 Identities=13% Similarity=0.179 Sum_probs=108.0
Q ss_pred hhccCCCCccc-CCCCCceecccccCCc-EEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGK-TVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
.+|.++|+|++ +.+|+ .+++++++|| +++|+|| ++||++|..++|.|.+++++|++. ++.|++|++|
T Consensus 10 ~~G~~~p~f~l~~~~G~-~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~~~vv~is~d 79 (160)
T 1xvw_A 10 NVGATAPDFTLRDQNQQ-LVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND---------DSAALAISVG 79 (160)
T ss_dssp CTTSBCCCCEEECTTSC-EEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS---------SEEEEEEESC
T ss_pred CCCCCCCCeEeEcCCCC-EEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC---------CcEEEEEeCC
Confidence 46999999999 99999 9999999998 9999998 999999999999999999998755 7999999998
Q ss_pred CCHHHHHHHHhcCCccccccCCcc--hhHHHHhcCcC----ccc--eEEEECCCCcEEecccc
Q 014225 278 RDQTSFESYFGTMPWLALPFGDPT--IKELTKYFDVQ----GIP--CLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~v~----~~P--~~~lid~~G~i~~~~~~ 332 (428)
+.+.+++|.+++++ .+|+..|. ...+.+.|++. ++| ++||||++|+|+.++.+
T Consensus 80 -~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g 140 (160)
T 1xvw_A 80 -PPPTHKIWATQSGF-TFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMK 140 (160)
T ss_dssp -CHHHHHHHHHHHTC-CSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEEC
T ss_pred -CHHHHHHHHHhcCC-CceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEec
Confidence 67788999988774 78887775 78899999998 999 99999999999998543
No 56
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.84 E-value=1.1e-20 Score=169.44 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=119.1
Q ss_pred hccCCCCccc-CC--CC--Cceeccccc-CCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 014225 202 LTNHDRGYLL-GH--PP--DEKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 274 (428)
Q Consensus 202 ~g~~~p~f~l-~~--~g--~~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~i 274 (428)
+|.++|+|++ +. +| + .++++++ +||++||+|| ++||++|..++|.|.+++++|+++ +++||+|
T Consensus 2 ~G~~aP~f~l~~~~~~G~~~-~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~I 71 (192)
T 2h01_A 2 FQGQAPSFKAEAVFGDNTFG-EVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER---------NVELLGC 71 (192)
T ss_dssp CSSBCCCCEEEEECTTSCEE-EEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT---------TEEEEEE
T ss_pred CCCcCCCcEeEeeecCCcee-EEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEE
Confidence 5889999999 88 89 8 9999999 9999999999 999999999999999999999876 7999999
Q ss_pred EcCCCHHHHHHHHhcCC------ccccccCCcchhHHHHhcCcC-----ccceEEEECCCCcEEeccccchhhcccccCC
Q 014225 275 STDRDQTSFESYFGTMP------WLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTKQGRNLINLYQENAY 343 (428)
Q Consensus 275 s~d~~~~~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~ 343 (428)
++| +.+..++|.+.+. .++||+..|....+++.|++. .+|++||||++|+|+++..+..
T Consensus 72 s~d-~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~--------- 141 (192)
T 2h01_A 72 SVD-SKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNL--------- 141 (192)
T ss_dssp ESS-CHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTTSBEEEEEEGGG---------
T ss_pred EeC-CHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCC---------
Confidence 998 5678888888762 477888888889999999999 8999999999999999854321
Q ss_pred CCChHHHHHHHHHHHHHHh
Q 014225 344 PFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 344 p~~~~~~~~L~~~l~~~~~ 362 (428)
......++|.+.|+++..
T Consensus 142 -~~~~~~~~l~~~l~~l~~ 159 (192)
T 2h01_A 142 -ALGRSVDEILRLIDALQH 159 (192)
T ss_dssp -SSGGGHHHHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHHhh
Confidence 112345677777776653
No 57
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.83 E-value=6.9e-21 Score=166.25 Aligned_cols=118 Identities=9% Similarity=0.025 Sum_probs=103.9
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEec-cCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
+|.++|+|++ +.+|+ .+++++++||+++|+||+ +||++|..++|.|++++++| . +++|++|++| +
T Consensus 18 ~G~~~P~f~l~~~~G~-~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~---------~v~vv~is~d-~ 84 (163)
T 1psq_A 18 VGDKALDFSLTTTDLS-KKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--D---------NTVVLTVSMD-L 84 (163)
T ss_dssp TTSBCCCCEEECTTSC-EEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T---------TEEEEEEESS-C
T ss_pred CCCCCCCEEEEcCCCc-EeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--C---------CcEEEEEECC-C
Confidence 5889999999 99999 999999999999999995 99999999999999999888 4 6999999998 5
Q ss_pred HHHHHHHHhcCCccccccCCc-chhHHHHhcCcC----c--cceEEEECCCCcEEecccc
Q 014225 280 QTSFESYFGTMPWLALPFGDP-TIKELTKYFDVQ----G--IPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~v~----~--~P~~~lid~~G~i~~~~~~ 332 (428)
.+..++|.++++.-+||+..| ....+++.|++. + .|++||||++|+|++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g 144 (163)
T 1psq_A 85 PFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYV 144 (163)
T ss_dssp HHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEEC
T ss_pred HHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEec
Confidence 677888888766327888888 788999999997 3 3999999999999998643
No 58
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.83 E-value=2.4e-20 Score=160.60 Aligned_cols=135 Identities=21% Similarity=0.299 Sum_probs=115.8
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEc--C
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST--D 277 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~--d 277 (428)
..|.++|+|.+ +.+|+ .+++++++ |+++|+||++||++|+.++|.|.++++++ . +.+++|++ +
T Consensus 6 ~~g~~~p~f~l~~~~g~-~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~----------v~~v~v~~d~~ 71 (154)
T 3ia1_A 6 KPGEPLPDFLLLDPKGQ-PVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET--G----------VPFYVISREPR 71 (154)
T ss_dssp CSBEECCCCCEECTTSC-EECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--C----------CCEEEEECCTT
T ss_pred CCCCcCCceEEECCCCC-EechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc--C----------CeEEEEeCCCc
Confidence 35899999999 99999 99999999 99999999999999999999999999998 4 68999999 5
Q ss_pred CCHHHHHHHHhcCCccccccCCc---chhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHH
Q 014225 278 RDQTSFESYFGTMPWLALPFGDP---TIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLE 354 (428)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~ 354 (428)
.+.+.+++++++.+ +.+|+..| ....+.+.|++.++|+++|||++|+++.+..+. .+ .++|.
T Consensus 72 ~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~-----------~~---~~~l~ 136 (154)
T 3ia1_A 72 DTREVVLEYMKTYP-RFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGR-----------AG---REALL 136 (154)
T ss_dssp CCHHHHHHHHTTCT-TEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESB-----------CC---HHHHH
T ss_pred ccHHHHHHHHHHcC-CCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCC-----------CC---HHHHH
Confidence 68899999999988 47888776 789999999999999999999999999875431 12 35667
Q ss_pred HHHHHHHhcC
Q 014225 355 KQMEEEAKNL 364 (428)
Q Consensus 355 ~~l~~~~~~~ 364 (428)
+.|++++...
T Consensus 137 ~~l~~~~~~~ 146 (154)
T 3ia1_A 137 DALLLAGADL 146 (154)
T ss_dssp HHHHHTTCCC
T ss_pred HHHHhccCcc
Confidence 7777665433
No 59
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.83 E-value=1.1e-20 Score=166.19 Aligned_cols=141 Identities=16% Similarity=0.245 Sum_probs=113.4
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCCh-hHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC-
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCI-PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 277 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~-~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d- 277 (428)
.+|.++|+|++ +.+|+ .+++++++||++||+||++||+ +|..++|.|.+++++|++. +.++.||+|++|
T Consensus 8 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~-------~~~~~vv~is~d~ 79 (174)
T 1xzo_A 8 PLNYEVEPFTFQNQDGK-NVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAE-------NIDVRIISFSVDP 79 (174)
T ss_dssp CCCEECCCCEEECTTSC-EEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHT-------TCCCEEEEEESCT
T ss_pred ccccccCCcEEEcCCCC-EEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhc-------CCcEEEEEEEeCC
Confidence 36889999999 99999 9999999999999999999999 9999999999999999876 335999999998
Q ss_pred --CCHHHHHHHHhcCCcccc---ccCCcchhHHHHhc----------------CcCccceEEEECCCCcEEeccccchhh
Q 014225 278 --RDQTSFESYFGTMPWLAL---PFGDPTIKELTKYF----------------DVQGIPCLVIIGPEGKTVTKQGRNLIN 336 (428)
Q Consensus 278 --~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~----------------~v~~~P~~~lid~~G~i~~~~~~~~~~ 336 (428)
.+.+.+++|.++++ +.+ +++.|.+..+.+.| ++..+|++||||++|+|+.+..+..
T Consensus 80 ~~d~~~~~~~~~~~~~-~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~-- 156 (174)
T 1xzo_A 80 ENDKPKQLKKFAANYP-LSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVE-- 156 (174)
T ss_dssp TTCCHHHHHHHHTTSC-CCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSS--
T ss_pred CCCCHHHHHHHHHHcC-CCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCC--
Confidence 46788999998876 445 66666555554443 4678999999999999998753311
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHh
Q 014225 337 LYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 337 ~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
+. ..++|.+.|+++++
T Consensus 157 -------~~---~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 157 -------NT---PYDDIISDVKSAST 172 (174)
T ss_dssp -------SC---CHHHHHHHHHHHTC
T ss_pred -------CC---CHHHHHHHHHHHHh
Confidence 11 13667777777654
No 60
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.83 E-value=1.4e-20 Score=171.78 Aligned_cols=140 Identities=15% Similarity=0.163 Sum_probs=118.5
Q ss_pred hhccCCCCccc-CC--CC--Cceeccccc-CCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEE
Q 014225 201 LLTNHDRGYLL-GH--PP--DEKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVF 273 (428)
Q Consensus 201 ~~g~~~p~f~l-~~--~g--~~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~ 273 (428)
.+|.++|+|++ +. +| + .++++++ +||++||+|| ++||++|+.++|.|.+++++|++. +++||+
T Consensus 22 ~~G~~aP~f~l~~~~~~G~~~-~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~ 91 (213)
T 2i81_A 22 YVGKEAPFFKAEAVFGDNSFG-EVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER---------NVELLG 91 (213)
T ss_dssp CBTSBCCCCEEEEECTTSCEE-EEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT---------TEEEEE
T ss_pred cCCCcCCCeEeeccccCCcee-EEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEE
Confidence 46999999999 87 89 8 9999999 9999999999 999999999999999999999876 799999
Q ss_pred EEcCCCHHHHHHHHhcCC------ccccccCCcchhHHHHhcCcC-----ccceEEEECCCCcEEeccccchhhcccccC
Q 014225 274 VSTDRDQTSFESYFGTMP------WLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTKQGRNLINLYQENA 342 (428)
Q Consensus 274 is~d~~~~~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~~~~~~~~g~~~ 342 (428)
|++| +.+..++|.+... .++||++.|....+++.|++. .+|++||||++|+|+++..+.. .
T Consensus 92 Is~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~-------~ 163 (213)
T 2i81_A 92 CSVD-SKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNL-------A 163 (213)
T ss_dssp EESS-CHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECT-------T
T ss_pred EeCC-CHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccccCCcccEEEEECCCCEEEEEEecCC-------C
Confidence 9998 6677888888762 478899888889999999999 8999999999999999853321 1
Q ss_pred CCCChHHHHHHHHHHHHHH
Q 014225 343 YPFTEAKLEFLEKQMEEEA 361 (428)
Q Consensus 343 ~p~~~~~~~~L~~~l~~~~ 361 (428)
.....++|.+.|+++.
T Consensus 164 ---~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 164 ---IGRSVDEILRIIDAIQ 179 (213)
T ss_dssp ---CCCCHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHH
Confidence 1123466677776665
No 61
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.83 E-value=3.1e-20 Score=161.73 Aligned_cols=116 Identities=22% Similarity=0.299 Sum_probs=103.2
Q ss_pred ccccccCc-cccCCCCEEecccCCCCE-EEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHH
Q 014225 38 LASKDRDY-LLNQHGTQVKVSDLEGKV-TALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 38 ~g~~~pdf-l~~~~G~~v~l~~~~gk~-vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
+|..+|+| |.+.+|+++++++++||+ ++|+|| ++||++|+.++|.|++++++|++.+ +++++|+.| +.+.+++|
T Consensus 4 ~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~vs~d-~~~~~~~~ 80 (161)
T 3drn_A 4 VGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYD--VVVIGVSSD-DINSHKRF 80 (161)
T ss_dssp TTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTC--EEEEEEESC-CHHHHHHH
T ss_pred CCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEEeCC-CHHHHHHH
Confidence 68999999 999999999999999997 999999 9999999999999999999999887 999999998 47789999
Q ss_pred HhcCCCceeccCChHHHHHHHhhcCCCC----CceEEEEcCCCCCCCcccc
Q 014225 115 RACMPWLAVPYSDLETKKALNRKFDIEG----IPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 115 ~~~~~~~~~~~~d~~~~~~l~~~~~v~~----~P~~~lid~~~~dG~i~~~ 161 (428)
++++++....+.|.+ ..+.+.|++.+ +|+++|||+ +|+++..
T Consensus 81 ~~~~~~~~~~~~d~~--~~~~~~~~v~~~~~~~P~~~lid~---~G~i~~~ 126 (161)
T 3drn_A 81 KEKYKLPFILVSDPD--KKIRELYGAKGFILPARITFVIDK---KGIIRHI 126 (161)
T ss_dssp HHHTTCCSEEEECTT--SHHHHHTTCCCSSSCCCEEEEECT---TSBEEEE
T ss_pred HHHhCCCceEEECCc--HHHHHHcCCCCcCcccceEEEECC---CCEEEEE
Confidence 998775433233433 78999999999 999999999 9999866
No 62
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.83 E-value=4.3e-21 Score=167.97 Aligned_cols=138 Identities=11% Similarity=0.074 Sum_probs=114.5
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccC-ChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARW-CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~w-C~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
+|.++|+|++ +.+|+ .+++++++||+++|+||++| |++|+.++|.|++++++| . ++++++|++| +
T Consensus 20 ~G~~~p~f~l~~~~G~-~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~---------~~~vv~is~d-~ 86 (167)
T 2jsy_A 20 VGDQAPDFTVLTNSLE-EKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--G---------DVNVYTISAD-L 86 (167)
T ss_dssp TTSCCCCCEEEBTTCC-EEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--S---------SCEEEEEECS-S
T ss_pred CCCcCCceEEECCCCC-EeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--C---------CCEEEEEECC-C
Confidence 5889999999 99999 99999999999999999999 999999999999999999 4 5899999998 4
Q ss_pred HHHHHHHHhcCCccccccCCc-chhHHHHhcCcCc------cceEEEECCCCcEEeccccchhhcccccCCCCChHHHHH
Q 014225 280 QTSFESYFGTMPWLALPFGDP-TIKELTKYFDVQG------IPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEF 352 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~v~~------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~ 352 (428)
.+..++|.+++++..+|+..| ....+.+.|++.. +|+++|||++|+|++++.+... ......++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~---------~~~~~~~~ 157 (167)
T 2jsy_A 87 PFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEA---------TNHPNYEK 157 (167)
T ss_dssp GGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBT---------TSCCCSHH
T ss_pred HHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCc---------CCCCCHHH
Confidence 566778888877547888888 7789999999987 4999999999999998643211 11222356
Q ss_pred HHHHHHHHH
Q 014225 353 LEKQMEEEA 361 (428)
Q Consensus 353 L~~~l~~~~ 361 (428)
+.+.|++++
T Consensus 158 l~~~l~~ll 166 (167)
T 2jsy_A 158 PIEAAKALV 166 (167)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 667776665
No 63
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.83 E-value=1.6e-20 Score=164.22 Aligned_cols=136 Identities=9% Similarity=0.069 Sum_probs=105.8
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC--
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR-- 278 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~-- 278 (428)
.|.++|+|++ +.+|+ .+++++++||++||+||++||++|+.++|.|++++++|+++ ++.|++|++|.
T Consensus 7 ~g~~~p~f~l~~~~G~-~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~d~~~ 76 (169)
T 2v1m_A 7 SWNSIYEFTVKDINGV-DVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK---------GLRILAFPCNQFG 76 (169)
T ss_dssp CCCSGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCST
T ss_pred CCcccccceeecCCCC-CccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC---------CeEEEEEECCccC
Confidence 5889999999 99999 99999999999999999999999999999999999999876 79999999973
Q ss_pred -----CHHHHHHHH-hcCCccccccCC--cchhHHH----H-----hcC-----cCccceEEEECCCCcEEeccccchhh
Q 014225 279 -----DQTSFESYF-GTMPWLALPFGD--PTIKELT----K-----YFD-----VQGIPCLVIIGPEGKTVTKQGRNLIN 336 (428)
Q Consensus 279 -----~~~~~~~~~-~~~~~~~~~~~~--d~~~~~~----~-----~~~-----v~~~P~~~lid~~G~i~~~~~~~~~~ 336 (428)
+.+.+++|+ .+.+ +.+|+.. |...... + .++ +..+|++||||++|+|+.+..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~--- 152 (169)
T 2v1m_A 77 GQEPWAEAEIKKFVTEKYG-VQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPT--- 152 (169)
T ss_dssp TCCCSCHHHHHHHHHHHHC-CCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTT---
T ss_pred CCCCCCHHHHHHHHHHhcC-CCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCC---
Confidence 467788884 6554 4566553 3332221 1 125 55679999999999999985431
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHh
Q 014225 337 LYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 337 ~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
.+. ++|.+.|+++++
T Consensus 153 --------~~~---~~l~~~i~~ll~ 167 (169)
T 2v1m_A 153 --------TAP---YDIEGDIMELLE 167 (169)
T ss_dssp --------SCG---GGGHHHHHHHHH
T ss_pred --------CCH---HHHHHHHHHHhc
Confidence 112 456677777665
No 64
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.83 E-value=1.5e-20 Score=157.92 Aligned_cols=112 Identities=18% Similarity=0.238 Sum_probs=103.3
Q ss_pred CCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHH
Q 014225 205 HDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSF 283 (428)
Q Consensus 205 ~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~ 283 (428)
++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++ ++.+++|++|.+.+.+
T Consensus 3 ~~p~~~l~~~~g~-~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~~~~~ 70 (136)
T 1lu4_A 3 ERLQFTATTLSGA-PFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-----------AVTFVGIATRADVGAM 70 (136)
T ss_dssp GGGCCEEEBTTSC-EEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSSCHHHH
T ss_pred CCCCeEeecCCCC-eecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-----------CcEEEEEEcCCCHHHH
Confidence 5789999 99999 999999999999999999999999999999999998875 4899999999889999
Q ss_pred HHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 284 ESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 284 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++...++ +++|+..|....+++.|++.++|+++|+|++|+++ +.
T Consensus 71 ~~~~~~~~-~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~ 115 (136)
T 1lu4_A 71 QSFVSKYN-LNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-FV 115 (136)
T ss_dssp HHHHHHHT-CCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-EE
T ss_pred HHHHHHcC-CCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-EE
Confidence 99999877 47888888889999999999999999999999998 53
No 65
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.83 E-value=2.4e-20 Score=158.98 Aligned_cols=121 Identities=19% Similarity=0.275 Sum_probs=105.3
Q ss_pred cccccccCc-cccCCCCEEecc--cCCCCEEEEEEecCCChhhhhhHHHHHHHHHHH-hcCCCcEEEEEEecCCChHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVS--DLEGKVTALYFSANWYPPCGNFTGVLVDVYEEL-RNNGSDFEVVFVSSDEDLNAFN 112 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~--~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~-~~~~~~~~ii~vs~D~~~~~~~ 112 (428)
.+|..+|+| +.+.+|+.++++ +++||+++|+||++||++|+.++|.|.++++++ ++.+ +.+++|++|.+.+.++
T Consensus 6 ~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~--~~~v~v~~d~~~~~~~ 83 (148)
T 3fkf_A 6 TVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKN--FAMLGISLDIDREAWE 83 (148)
T ss_dssp CTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTT--EEEEEEECCSCHHHHH
T ss_pred cCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCC--eEEEEEECCCCHHHHH
Confidence 368999999 999999999999 999999999999999999999999999999999 7766 9999999999999999
Q ss_pred HHHhcCCCceeccCCh-HHHHHHHhhcCCCCCceEEEEcCCCCCCCccccc
Q 014225 113 NYRACMPWLAVPYSDL-ETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 113 ~~~~~~~~~~~~~~d~-~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~~ 162 (428)
++++++++....+.+. +....+++.|++.++|++++||+ +|+++...
T Consensus 84 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~ 131 (148)
T 3fkf_A 84 TAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSP---TGKILARD 131 (148)
T ss_dssp HHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECT---TSBEEEES
T ss_pred HHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEECC---CCeEEEec
Confidence 9999776432222232 11268999999999999999999 99988664
No 66
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.83 E-value=1.3e-20 Score=203.81 Aligned_cols=176 Identities=15% Similarity=0.216 Sum_probs=123.3
Q ss_pred ccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHh
Q 014225 57 SDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 136 (428)
Q Consensus 57 ~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 136 (428)
+++.|++++|+|||+||++|+.++|.|.+++++++++ +.++.|+.|.. ..+++
T Consensus 451 ~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~---v~~~~vd~~~~------------------------~~~~~ 503 (780)
T 3apo_A 451 PASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ---LKVGTLDCTIH------------------------EGLCN 503 (780)
T ss_dssp CTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC------------------------HHHHH
T ss_pred HHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEeCCCC------------------------HHHHH
Confidence 3458899999999999999999999999999999754 88888776543 56888
Q ss_pred hcCCCCCceEEEEcCCCCCCCcccccchhhhhhcccCccccchhhHHHHHHHHHHHHHHHHHhhhhccCCCCcccCCCCC
Q 014225 137 KFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGHPPD 216 (428)
Q Consensus 137 ~~~v~~~P~~~lid~~~~dG~i~~~~~~~~i~~~g~~~~p~t~~~~~~l~~~~~~~~~~~~~~~~~g~~~p~f~l~~~g~ 216 (428)
.|++.++|++++++ +|++.... |. .+.+.+ ...... .++ |... ..++.
T Consensus 504 ~~~v~~~Pt~~~~~----~g~~~~~~--------g~----~~~~~l---~~fi~~---------~~~---~~v~-~l~~~ 551 (780)
T 3apo_A 504 MYNIQAYPTTVVFN----QSSIHEYE--------GH----HSAEQI---LEFIED---------LRN---PSVV-SLTPS 551 (780)
T ss_dssp HTTCCSSSEEEEEE----TTEEEEEC--------SC----SCHHHH---HHHHHH---------HHS---CSEE-ECCHH
T ss_pred HcCCCcCCeEEEEc----CCceeeec--------Cc----ccHHHH---HHHHHh---------hcc---ccee-ecCcc
Confidence 99999999999996 67542110 11 111212 111111 111 1111 11111
Q ss_pred --ceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccc
Q 014225 217 --EKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLA 294 (428)
Q Consensus 217 --~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~ 294 (428)
+.+-...-.+++++|.|++|||++|+++.|.+.++++.++++ +.++.|+++..
T Consensus 552 ~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~----------v~~~~vd~~~~--------------- 606 (780)
T 3apo_A 552 TFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL----------INVGSVDCGQY--------------- 606 (780)
T ss_dssp HHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------SEEEEEETTTT---------------
T ss_pred cHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC----------eEEEEEECcch---------------
Confidence 011111123467899999999999999999999999999754 77777776644
Q ss_pred cccCCcchhHHHHhcCcCccceEEEECCCC
Q 014225 295 LPFGDPTIKELTKYFDVQGIPCLVIIGPEG 324 (428)
Q Consensus 295 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G 324 (428)
..+++.|+|.++|+++++..++
T Consensus 607 --------~~l~~~~~v~~~Pti~~~~~~~ 628 (780)
T 3apo_A 607 --------HSFCTQENVQRYPEIRFYPQKS 628 (780)
T ss_dssp --------HHHHHHTTCCSSSEEEEECCCS
T ss_pred --------HHHHHHcCCCCCCeEEEEcCCC
Confidence 6788999999999999996544
No 67
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.83 E-value=1.7e-19 Score=166.09 Aligned_cols=175 Identities=14% Similarity=0.156 Sum_probs=115.8
Q ss_pred CCCCEEEEEE----ecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHH
Q 014225 59 LEGKVTALYF----SANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKAL 134 (428)
Q Consensus 59 ~~gk~vlv~F----~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l 134 (428)
.++.++++.| |++||++|+.++|.+.++++++.+.+ ++.+..|+.|.. ..+
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~-~v~~~~vd~~~~------------------------~~l 73 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQD-KIKLDIYSPFTH------------------------KEE 73 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTT-TEEEEEECTTTC------------------------HHH
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCC-ceEEEEecCccc------------------------HHH
Confidence 4455666666 59999999999999999999985432 488877755433 789
Q ss_pred HhhcCCCCCceEEEEcCCCCCCCcc-cccchhhhhhcccCccccchhhHHHHHHHHHHHHHHHHHhhhhccCCCCcccCC
Q 014225 135 NRKFDIEGIPCLVVLQPYDDKDDAT-LHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGH 213 (428)
Q Consensus 135 ~~~~~v~~~P~~~lid~~~~dG~i~-~~~~~~~i~~~g~~~~p~t~~~~~~l~~~~~~~~~~~~~~~~~g~~~p~f~l~~ 213 (428)
++.|+|.++|++++++ +|... ...+. +........+..... ++..... .
T Consensus 74 ~~~~~v~~~Ptl~~~~----~~~~~~~~~G~-----------~~~~~l~~~~~~~~~-----------~~~~~~~----l 123 (229)
T 2ywm_A 74 TEKYGVDRVPTIVIEG----DKDYGIRYIGL-----------PAGLEFTTLINGIFH-----------VSQRKPQ----L 123 (229)
T ss_dssp HHHTTCCBSSEEEEES----SSCCCEEEESC-----------CCTTHHHHHHHHHHH-----------HHTTCCS----C
T ss_pred HHHcCCCcCcEEEEEC----CCcccceecCC-----------ccHHHHHHHHHHHHh-----------ccCCccC----C
Confidence 9999999999999996 34322 11111 111111111111110 0011111 1
Q ss_pred CCCceec-ccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCc
Q 014225 214 PPDEKVP-VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPW 292 (428)
Q Consensus 214 ~g~~~v~-l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~ 292 (428)
+.. .+. +....+++++++||++||++|+.+.|.+++++.++. ++.++.|+++..
T Consensus 124 ~~~-~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~-----------~v~~~~vd~~~~------------- 178 (229)
T 2ywm_A 124 SEK-TLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND-----------YITSKVIDASEN------------- 178 (229)
T ss_dssp CHH-HHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT-----------TEEEEEEEGGGC-------------
T ss_pred CHH-HHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC-----------CeEEEEEECCCC-------------
Confidence 111 111 112334566899999999999999999999988872 488888888754
Q ss_pred cccccCCcchhHHHHhcCcCccceEEEECCCCcE
Q 014225 293 LALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 326 (428)
Q Consensus 293 ~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 326 (428)
.++++.|+|.++|++++ +|++
T Consensus 179 ----------~~l~~~~~v~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 179 ----------QDLAEQFQVVGVPKIVI---NKGV 199 (229)
T ss_dssp ----------HHHHHHTTCCSSSEEEE---GGGT
T ss_pred ----------HHHHHHcCCcccCEEEE---CCEE
Confidence 67899999999999988 7774
No 68
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.83 E-value=2e-20 Score=163.73 Aligned_cols=119 Identities=13% Similarity=0.196 Sum_probs=98.3
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC--
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR-- 278 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~-- 278 (428)
.|.++|+|++ +.+|+ .+++++++||++||+||++||++|+.++|.|++++++|+++ ++.|++|++|.
T Consensus 8 ~g~~~p~f~l~~~~g~-~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~vs~d~~~ 77 (170)
T 2p5q_A 8 NPESVHDFTVKDAKEN-DVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ---------GLEILAFPCNQFG 77 (170)
T ss_dssp --CCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCTTT
T ss_pred CCccccceEEEcCCCC-EecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC---------CEEEEEEECCCCC
Confidence 5889999999 99999 99999999999999999999999999999999999999876 79999999973
Q ss_pred -----CHHHHHHHHh-cCCccccccC--CcchhHH----H-----HhcCc--Cccc---eEEEECCCCcEEeccc
Q 014225 279 -----DQTSFESYFG-TMPWLALPFG--DPTIKEL----T-----KYFDV--QGIP---CLVIIGPEGKTVTKQG 331 (428)
Q Consensus 279 -----~~~~~~~~~~-~~~~~~~~~~--~d~~~~~----~-----~~~~v--~~~P---~~~lid~~G~i~~~~~ 331 (428)
+.+.+++|++ .++ +.+|+. .|....+ . ..+++ .++| ++||||++|+|+.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~ 151 (170)
T 2p5q_A 78 EEEPGTNDQITDFVCTRFK-SEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYY 151 (170)
T ss_dssp TCCCSCHHHHHHHHHHHTC-CCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEEC
T ss_pred CCCCCCHHHHHHHHHHhcC-CCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeC
Confidence 6778888888 544 566666 3433322 1 22466 7888 9999999999999854
No 69
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.83 E-value=1.3e-20 Score=163.46 Aligned_cols=117 Identities=17% Similarity=0.345 Sum_probs=105.3
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCH
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 280 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~ 280 (428)
.|.++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|++. ++.+++|++|.
T Consensus 17 ~G~~~p~f~l~~~~g~-~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~---------~~~~v~v~~d~-- 84 (158)
T 3hdc_A 17 TGALAPNFKLPTLSGE-NKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG---------DLVVLAVNVEK-- 84 (158)
T ss_dssp TTSBCCCCEEECTTSC-EEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT---------SEEEEEEECSS--
T ss_pred CCCcCCCceeEcCCCC-EEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC---------CeEEEEEeCCH--
Confidence 5899999999 99999 99999999999999999999999999999999999999755 79999999987
Q ss_pred HHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEecccc
Q 014225 281 TSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~ 332 (428)
.++++....+ +.+++..|....+.+.|++.++|+++|||++|+|+.+..+
T Consensus 85 -~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G 134 (158)
T 3hdc_A 85 -RFPEKYRRAP-VSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTG 134 (158)
T ss_dssp -SCCGGGGGCC-CSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBEEEEEES
T ss_pred -HHHHHHHHcC-CCceEEECchHHHHHHhCCCCcceEEEEcCCCCEEEEEeC
Confidence 3556666665 5688888888999999999999999999999999998644
No 70
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.83 E-value=6.9e-21 Score=169.25 Aligned_cols=120 Identities=13% Similarity=0.140 Sum_probs=98.8
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC-
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 278 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~- 278 (428)
.+|.++|+|++ +.+|+ .+++++++||++||+||++|||+|+.++|.|++++++|+++ ++.|++|++|.
T Consensus 24 ~~g~~~p~f~l~~~~G~-~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~---------~v~vv~vs~d~~ 93 (181)
T 2p31_A 24 QQEQDFYDFKAVNIRGK-LVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH---------HFNVLAFPCNQF 93 (181)
T ss_dssp ---CCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred CcCCccCceEeecCCCC-EecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC---------CEEEEEEECcCC
Confidence 35889999999 99999 99999999999999999999999999999999999999877 79999999974
Q ss_pred ------CHHHHHHHHhc-CCccccccCC--cchhHHHH---hcCcCccc-------eEEEECCCCcEEeccc
Q 014225 279 ------DQTSFESYFGT-MPWLALPFGD--PTIKELTK---YFDVQGIP-------CLVIIGPEGKTVTKQG 331 (428)
Q Consensus 279 ------~~~~~~~~~~~-~~~~~~~~~~--d~~~~~~~---~~~v~~~P-------~~~lid~~G~i~~~~~ 331 (428)
+.+++++|+++ .+ +.+|+.. |.+..... .|++.++| ++||||++|+|+.+..
T Consensus 94 ~~~e~~~~~~~~~~~~~~~~-~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~ 164 (181)
T 2p31_A 94 GQQEPDSNKEIESFARRTYS-VSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWD 164 (181)
T ss_dssp TTCCCSCHHHHHHHHHHHHC-CCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEEC
T ss_pred CCCCCCCHHHHHHHHHhhcC-CCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeC
Confidence 67788888887 55 5677764 32222211 35577889 9999999999998853
No 71
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.4e-20 Score=165.42 Aligned_cols=134 Identities=14% Similarity=0.165 Sum_probs=97.8
Q ss_pred ccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC----
Q 014225 203 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD---- 277 (428)
Q Consensus 203 g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d---- 277 (428)
+..+|+|++ +.+|+ .+++++++||++||+||++||++|+ ++|.|++++++|+++ ++.|++|++|
T Consensus 9 ~~~~~~f~l~d~~G~-~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~---------~v~vv~vs~d~~~~ 77 (171)
T 3cmi_A 9 MSEFYKLAPVDKKGQ-PFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE---------GFTIIGFPCNQFGH 77 (171)
T ss_dssp -CGGGGCCCBBTTSC-BCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG---------TEEEEEEEECSCC-
T ss_pred hhheeeeEEEcCCCC-EecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC---------CeEEEEEECcccCC
Confidence 667899999 99999 9999999999999999999999999 999999999999876 7999999986
Q ss_pred ---CCHHHHHHHH-hcCCccccccCCcch--hH----H-----HHhcCcCccc------eEEEECCCCcEEeccccchhh
Q 014225 278 ---RDQTSFESYF-GTMPWLALPFGDPTI--KE----L-----TKYFDVQGIP------CLVIIGPEGKTVTKQGRNLIN 336 (428)
Q Consensus 278 ---~~~~~~~~~~-~~~~~~~~~~~~d~~--~~----~-----~~~~~v~~~P------~~~lid~~G~i~~~~~~~~~~ 336 (428)
.+.+.+++|+ ++.+ +++|+..|.+ .. + .+.|++.++| ++||||++|+|+.+..+.
T Consensus 78 ~~~d~~~~~~~~~~~~~~-~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~--- 153 (171)
T 3cmi_A 78 QEPGSDEEIAQFCQLNYG-VTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSL--- 153 (171)
T ss_dssp -----------------C-CCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTT---
T ss_pred CCCCCHHHHHHHHHhccC-CCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCC---
Confidence 3566788888 6655 5677765421 11 1 2468999999 999999999999985431
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHh
Q 014225 337 LYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 337 ~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
.+. ++|.+.|+++++
T Consensus 154 --------~~~---~~l~~~i~~ll~ 168 (171)
T 3cmi_A 154 --------TKP---SSLSETIEELLK 168 (171)
T ss_dssp --------SCG---GGGHHHHHHHHT
T ss_pred --------CCH---HHHHHHHHHHHH
Confidence 122 456666776665
No 72
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.83 E-value=1.6e-20 Score=171.17 Aligned_cols=141 Identities=13% Similarity=0.141 Sum_probs=115.7
Q ss_pred hhccCCCCccc-CC---CCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 201 LLTNHDRGYLL-GH---PPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 201 ~~g~~~p~f~l-~~---~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
.+|.++|+|++ +. +|+ .+++++++||++||+|| ++||++|..++|.|++++++|+++ +++||+|+
T Consensus 20 ~~G~~aP~f~l~~~~~~~g~-~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~---------~v~vv~Is 89 (211)
T 2pn8_A 20 FQSMPAPYWEGTAVIDGEFK-ELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI---------NTEVVACS 89 (211)
T ss_dssp CSSCBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT---------TEEEEEEE
T ss_pred CCCCcCCCeEeecccCCCCc-EEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 46999999999 64 457 99999999999999999 999999999999999999999876 89999999
Q ss_pred cCCCHHHHHHHHhcCC------ccccccCCcchhHHHHhcCcC------ccceEEEECCCCcEEeccccchhhcccccCC
Q 014225 276 TDRDQTSFESYFGTMP------WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQGRNLINLYQENAY 343 (428)
Q Consensus 276 ~d~~~~~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~ 343 (428)
+| +.+..++|.+... .++||++.|....+++.|++. .+|++||||++|+|++...+.. .
T Consensus 90 ~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~-------~- 160 (211)
T 2pn8_A 90 VD-SQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDL-------P- 160 (211)
T ss_dssp SS-CHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT-------T-
T ss_pred CC-CHHHHHHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEEecCC-------C-
Confidence 98 5667888888761 478888888888999999994 6999999999999999853321 1
Q ss_pred CCChHHHHHHHHHHHHHHh
Q 014225 344 PFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 344 p~~~~~~~~L~~~l~~~~~ 362 (428)
.....+++.+.|+++..
T Consensus 161 --~~~~~~ell~~l~~l~~ 177 (211)
T 2pn8_A 161 --VGRSVDETLRLVQAFQY 177 (211)
T ss_dssp --BCCCHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHhhh
Confidence 11234666777766553
No 73
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.83 E-value=7.7e-21 Score=166.47 Aligned_cols=116 Identities=12% Similarity=0.065 Sum_probs=104.3
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
+|.++|+|++ +.+|+ .+++++++||+++|+|| ++||++|..++|.|++++++ . ++.|++|+.| +
T Consensus 22 ~G~~aP~f~l~~~~G~-~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~---------~~~vv~is~d-~ 87 (166)
T 3p7x_A 22 EGDFAPDFTVLDNDLN-QVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---E---------EGIVLTISAD-L 87 (166)
T ss_dssp TTSBCCCCEEECTTSC-EEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---T---------TSEEEEEESS-C
T ss_pred CCCCCCCeEEEcCCCC-EEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---C---------CCEEEEEECC-C
Confidence 5899999999 99999 99999999999999999 78999999999999998877 3 6899999998 6
Q ss_pred HHHHHHHHhcCCccccccCCcc-hhHHHHhcCcCc------cceEEEECCCCcEEeccc
Q 014225 280 QTSFESYFGTMPWLALPFGDPT-IKELTKYFDVQG------IPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~v~~------~P~~~lid~~G~i~~~~~ 331 (428)
.+.+++|.++++.-+||+..|. ...+++.||+.. +|++||||++|+|++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~ 146 (166)
T 3p7x_A 88 PFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEI 146 (166)
T ss_dssp HHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEE
T ss_pred HHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEE
Confidence 7788899988774378888888 889999999985 899999999999999853
No 74
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.82 E-value=2.9e-20 Score=166.54 Aligned_cols=137 Identities=12% Similarity=0.132 Sum_probs=110.9
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC--
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR-- 278 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~-- 278 (428)
.+.++|+|++ +.+|+ .+++++++||++||+||++||++|+.++|.|++++++|+++ +++||+|++|.
T Consensus 24 ~~~~~p~f~l~~~~G~-~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~---------~v~vv~vs~d~~~ 93 (190)
T 2vup_A 24 AASSIFDFEVLDADHK-PYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ---------GFTVLAFPCNQFG 93 (190)
T ss_dssp CCCSGGGSCCBBTTSS-BCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TCEEEEEECCCST
T ss_pred CCCcccCeEEEcCCCC-EEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC---------CeEEEEEEcCccC
Confidence 3778999999 99999 99999999999999999999999999999999999999876 79999999983
Q ss_pred -----CHHHHHHHH-hcCCccccccCC--cchhHH----H-----HhcCcCccc------eEEEECCCCcEEeccccchh
Q 014225 279 -----DQTSFESYF-GTMPWLALPFGD--PTIKEL----T-----KYFDVQGIP------CLVIIGPEGKTVTKQGRNLI 335 (428)
Q Consensus 279 -----~~~~~~~~~-~~~~~~~~~~~~--d~~~~~----~-----~~~~v~~~P------~~~lid~~G~i~~~~~~~~~ 335 (428)
+.+.+++|+ .+.+ +.||+.. |....+ . ..|++.++| ++||||++|+|+.+..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~-~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~-- 170 (190)
T 2vup_A 94 GQEPGNEEEIKEFVCTKFK-AEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPG-- 170 (190)
T ss_dssp TCCCSCHHHHHHHHHHHHC-CCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTT--
T ss_pred CCCCCCHHHHHHHHHHhcC-CCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCC--
Confidence 677888888 6555 4566654 332222 1 346899999 999999999999985331
Q ss_pred hcccccCCCCChHHHHHHHHHHHHHHhc
Q 014225 336 NLYQENAYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 336 ~~~g~~~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
.. .++|.+.|+++++.
T Consensus 171 ---------~~---~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 171 ---------AS---VKDIEKKLIPLLES 186 (190)
T ss_dssp ---------CC---HHHHHHHHHHHHHC
T ss_pred ---------CC---HHHHHHHHHHHHhh
Confidence 12 25677888887764
No 75
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.82 E-value=1.7e-20 Score=168.81 Aligned_cols=140 Identities=12% Similarity=0.157 Sum_probs=117.6
Q ss_pred hccCCCCccc-CCC-------------C--CceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCC
Q 014225 202 LTNHDRGYLL-GHP-------------P--DEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGD 264 (428)
Q Consensus 202 ~g~~~p~f~l-~~~-------------g--~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~ 264 (428)
+|.++|+|++ +.+ | + .+++++++||++||+|| ++||++|..++|.|.+++++|+++
T Consensus 6 ~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~-~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------ 78 (195)
T 2bmx_A 6 IGDQFPAYQLTALIGGDLSKVDAKQPGDYFT-TITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR------ 78 (195)
T ss_dssp TTCBCCCCEEEEECSSCGGGSCCSSGGGGEE-EEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT------
T ss_pred CCCcCCCcCcccccccccccccccccCCCcc-EeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC------
Confidence 5899999999 777 6 7 99999999999999999 999999999999999999999876
Q ss_pred CCCCEEEEEEEcCCCHHHHHHHHhcCC---ccccccCCcchhHHHHhcCcC-----ccceEEEECCCCcEEeccccchhh
Q 014225 265 ALEDFEVVFVSTDRDQTSFESYFGTMP---WLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTKQGRNLIN 336 (428)
Q Consensus 265 ~~~~~~iv~is~d~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~~~~~~ 336 (428)
+++|++|++|. .+..++|.+.+. .++||+..|....+.+.|++. ++|+++|||++|+|+.+..+..
T Consensus 79 ---~v~vv~Vs~d~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~-- 152 (195)
T 2bmx_A 79 ---DAQILGVSIDS-EFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAG-- 152 (195)
T ss_dssp ---TEEEEEEESSC-HHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECT--
T ss_pred ---CCEEEEEECCC-HHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCC--
Confidence 79999999984 677888888762 367888888888999999999 9999999999999999854321
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHh
Q 014225 337 LYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 337 ~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
. .....++|.+.|++++.
T Consensus 153 -----~---~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 153 -----S---VGRNVDEVLRVLDALQS 170 (195)
T ss_dssp -----T---CCCCHHHHHHHHHHHHC
T ss_pred -----C---CCCCHHHHHHHHHHHhh
Confidence 1 11134677777877764
No 76
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.82 E-value=8.2e-21 Score=161.90 Aligned_cols=121 Identities=20% Similarity=0.240 Sum_probs=105.0
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYR 115 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~ 115 (428)
.+|..+|+| +.+.+|+++++++++||+++|+||++||++|+.++|.|+++++++++.+ +.+++|+.|.+.+.+++++
T Consensus 6 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~v~v~~d~~~~~~~~~~ 83 (148)
T 3hcz_A 6 LLGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKG--IQVYAANIERKDEEWLKFI 83 (148)
T ss_dssp CTTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGT--EEEEEEECCSSSHHHHHHH
T ss_pred CCCCcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCC--EEEEEEEecCCHHHHHHHH
Confidence 469999999 9999999999999999999999999999999999999999999999886 9999999998888999999
Q ss_pred hcCCCc-eeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCccccc
Q 014225 116 ACMPWL-AVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 116 ~~~~~~-~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~~ 162 (428)
+++++. .....+......+.+.|++.++|++++||+ +|+++...
T Consensus 84 ~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~---~G~i~~~~ 128 (148)
T 3hcz_A 84 RSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDK---NKVIIAKR 128 (148)
T ss_dssp HHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECT---TCBEEEES
T ss_pred HHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECC---CCcEEEec
Confidence 987643 111224332123899999999999999999 99998663
No 77
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.82 E-value=2.5e-20 Score=171.22 Aligned_cols=122 Identities=18% Similarity=0.208 Sum_probs=106.7
Q ss_pred hhhccCCCCccc-CC-CC--CceecccccCCcEEEEEEec-cCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 014225 200 NLLTNHDRGYLL-GH-PP--DEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 274 (428)
Q Consensus 200 ~~~g~~~p~f~l-~~-~g--~~~v~l~~~~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~i 274 (428)
-.+|.++|+|++ +. +| + .+++++++||++||+||+ +||++|..++|.|++++++|+++ +++||+|
T Consensus 40 l~~G~~aP~f~l~~~~d~~G~-~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~---------~v~vv~I 109 (222)
T 3ztl_A 40 LLPNRPAPEFKGQAVINGEFK-EICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR---------NCQVIAC 109 (222)
T ss_dssp CCSSEECCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT---------TEEEEEE
T ss_pred ccCCCCCCCeEEecccCCCCc-EEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEEE
Confidence 346999999999 65 55 7 999999999999999996 99999999999999999999876 7999999
Q ss_pred EcCCCHHHHHHHHhcC------CccccccCCcchhHHHHhcCcC------ccceEEEECCCCcEEecccc
Q 014225 275 STDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 275 s~d~~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~ 332 (428)
++|. .++..+|.+.. ..++||++.|....+.+.|++. .+|++||||++|+|+++..+
T Consensus 110 s~D~-~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g 178 (222)
T 3ztl_A 110 STDS-QYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITIN 178 (222)
T ss_dssp ESSC-HHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEE
T ss_pred ECCC-HHHHHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEEec
Confidence 9984 55666776654 2578898888889999999998 89999999999999998543
No 78
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.82 E-value=3.7e-20 Score=166.83 Aligned_cols=140 Identities=16% Similarity=0.160 Sum_probs=116.2
Q ss_pred hhccCCCCccc-CC-CC--CceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 201 LLTNHDRGYLL-GH-PP--DEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 201 ~~g~~~p~f~l-~~-~g--~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
.+|.++|+|++ +. +| + .+++++++||++||+|| ++||++|..++|.|.+++++|++. +++||+|+
T Consensus 6 ~~G~~aP~f~l~~~~~g~~~-~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~Is 75 (197)
T 1qmv_A 6 RIGKPAPDFKATAVVDGAFK-EVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL---------GCEVLGVS 75 (197)
T ss_dssp CTTSBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT---------TEEEEEEE
T ss_pred cCCCCCCCeEeEeecCCCcc-EEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 46999999999 77 78 8 99999999999999999 999999999999999999999876 79999999
Q ss_pred cCCCHHHHHHHHhcC------CccccccCCcchhHHHHhcCcC------ccceEEEECCCCcEEeccccchhhcccccCC
Q 014225 276 TDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQGRNLINLYQENAY 343 (428)
Q Consensus 276 ~d~~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~ 343 (428)
+|. .+...+|++.. ..++||+..|....+++.|++. .+|++||||++|+|+.+..+.. .
T Consensus 76 ~d~-~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~-------~- 146 (197)
T 1qmv_A 76 VDS-QFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDL-------P- 146 (197)
T ss_dssp SSC-HHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT-------T-
T ss_pred CCC-HHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCC-------C-
Confidence 984 56677787765 1478888888888999999998 8999999999999999853321 1
Q ss_pred CCChHHHHHHHHHHHHHH
Q 014225 344 PFTEAKLEFLEKQMEEEA 361 (428)
Q Consensus 344 p~~~~~~~~L~~~l~~~~ 361 (428)
. ....+++.+.|+++.
T Consensus 147 -~-~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 147 -V-GRSVDEALRLVQAFQ 162 (197)
T ss_dssp -B-CCCHHHHHHHHHHHH
T ss_pred -C-CCCHHHHHHHHHhcc
Confidence 0 123466666666654
No 79
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.82 E-value=1.2e-20 Score=165.16 Aligned_cols=117 Identities=13% Similarity=0.101 Sum_probs=104.0
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
+|.++|+|++ +.+|+ .+++++++||++||+|| ++||++|..++|.|++++++| . +++||+|++| +
T Consensus 19 ~G~~~P~f~l~~~~G~-~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~---------~v~vv~Is~d-~ 85 (165)
T 1q98_A 19 VGEIVENFILVGNDLA-DVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--S---------NTIVLCISAD-L 85 (165)
T ss_dssp TTCBCCCCEEECTTSC-EEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--T---------TEEEEEEESS-C
T ss_pred CCCCCCCeEEECCCCC-EEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--C---------CCEEEEEeCC-C
Confidence 5889999999 99999 99999999999999999 799999999999999999998 4 6999999998 5
Q ss_pred HHHHHHHHhcCCccccccCCcc-hhHHHHhcCcCc---------cceEEEECCCCcEEeccc
Q 014225 280 QTSFESYFGTMPWLALPFGDPT-IKELTKYFDVQG---------IPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~v~~---------~P~~~lid~~G~i~~~~~ 331 (428)
.+.+++|.++++.-+||++.|. ...+++.|++.. .|++||||++|+|++.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~ 147 (165)
T 1q98_A 86 PFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQL 147 (165)
T ss_dssp HHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred HHHHHHHHHHcCCCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEe
Confidence 6778888887763268888786 789999999864 599999999999999864
No 80
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.82 E-value=7.6e-20 Score=166.31 Aligned_cols=120 Identities=12% Similarity=0.083 Sum_probs=96.4
Q ss_pred hccCCCCccc-CCC-CCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC-
Q 014225 202 LTNHDRGYLL-GHP-PDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 278 (428)
Q Consensus 202 ~g~~~p~f~l-~~~-g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~- 278 (428)
.+.++|+|++ +.+ |+ .+++++++||+|||+|||+|||+|++++|.|++++++|+++ +++||+|++|.
T Consensus 22 ~~~~~p~f~l~~~~~G~-~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~---------g~~vv~v~~d~~ 91 (208)
T 2f8a_A 22 SMQSVYAFSARPLAGGE-PVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR---------GLVVLGFPCNQF 91 (208)
T ss_dssp CCCCGGGCEECBTTCSS-CEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred hcCccCceEeeeCCCCC-CccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC---------CeEEEEEECCcc
Confidence 4678999999 999 99 99999999999999999999999999999999999999877 79999999972
Q ss_pred ------CHHHHHHHHh------cCCccccccCCcc--hh--------HHHHhc-------------------------Cc
Q 014225 279 ------DQTSFESYFG------TMPWLALPFGDPT--IK--------ELTKYF-------------------------DV 311 (428)
Q Consensus 279 ------~~~~~~~~~~------~~~~~~~~~~~d~--~~--------~~~~~~-------------------------~v 311 (428)
+.+++++|++ +.+ ++||+..+. +. .+...+ ++
T Consensus 92 ~~~e~d~~~~i~~f~~~~~~~~~~~-~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 170 (208)
T 2f8a_A 92 GHQENAKNEEILNSLKYVRPGGGFE-PNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDV 170 (208)
T ss_dssp TTTTCSCHHHHHHHHHHTSSCTTCC-CSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCC
T ss_pred cccCCCCHHHHHHHHHhcccccccc-cceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCcc
Confidence 4577888887 444 667765321 11 111122 25
Q ss_pred CccceEEEECCCCcEEecccc
Q 014225 312 QGIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 312 ~~~P~~~lid~~G~i~~~~~~ 332 (428)
...|++||||++|+|+.+..+
T Consensus 171 ~~~p~tflID~~G~i~~~~~g 191 (208)
T 2f8a_A 171 AWNFEKFLVGPDGVPLRRYSR 191 (208)
T ss_dssp CSTTCEEEECTTSCEEEEECT
T ss_pred ccCceEEEEcCCCcEEEEeCC
Confidence 667999999999999998643
No 81
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.82 E-value=3.8e-20 Score=158.91 Aligned_cols=117 Identities=21% Similarity=0.401 Sum_probs=103.0
Q ss_pred ccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHh
Q 014225 38 LASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRA 116 (428)
Q Consensus 38 ~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~ 116 (428)
+|..+|+| |.+.+|+.+++++++||+++|+||++||++|+.++|.|+++++++++.+ +.+++|++|.+.+.++++++
T Consensus 2 ~G~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~v~~d~~~~~~~~~~~ 79 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQG--VEIVAVNVGESKIAVHNFMK 79 (151)
T ss_dssp CCEECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCHHHHHHHHH
T ss_pred CCCcCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCC--eEEEEEECCCCHHHHHHHHH
Confidence 58889999 9999999999999999999999999999999999999999999998876 99999999999899999999
Q ss_pred cCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 117 CMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 117 ~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++++....+.+.+ ..+.+.|++.++|++++||+ +|+++..
T Consensus 80 ~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 119 (151)
T 2f9s_A 80 SYGVNFPVVLDTD--RQVLDAYDVSPLPTTFLINP---EGKVVKV 119 (151)
T ss_dssp HHTCCSCEEEETT--SHHHHHTTCCSSCEEEEECT---TSEEEEE
T ss_pred HcCCCceEEECCc--hHHHHhcCCCCCCeEEEECC---CCcEEEE
Confidence 8764322122332 68899999999999999999 9988765
No 82
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=6.7e-22 Score=171.52 Aligned_cols=119 Identities=27% Similarity=0.403 Sum_probs=107.6
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHH-HHHHHH-hhhhhcCCCCCCEEEEEEEcCC
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLS-IYQKIK-QNLVEKGDALEDFEVVFVSTDR 278 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~-l~~~~~-~~~~~~~~~~~~~~iv~is~d~ 278 (428)
+|.++|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+ ++++++ .. ++.+++|++|.
T Consensus 9 ~g~~~p~f~l~~~~g~-~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~---------~~~vv~v~~d~ 78 (159)
T 2ls5_A 9 IGEMAPDFTITLTDGK-QVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNA---------DFALIGIDRDE 78 (159)
Confidence 5889999999 99999 999999999999999999999999999999998 988887 44 79999999998
Q ss_pred CHHHHHHHHhcCCccccccCCcchhHHHHhcC--cCccceEEEECCCCcEEeccc
Q 014225 279 DQTSFESYFGTMPWLALPFGDPTIKELTKYFD--VQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--v~~~P~~~lid~~G~i~~~~~ 331 (428)
+.+.+++|...++ +.+|+..|....+.+.|+ +.++|+++|||++|+++.+..
T Consensus 79 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~ 132 (159)
T 2ls5_A 79 PLEKVLAFAKSTG-VTYPLGLDPGADIFAKYALRDAGITRNVLIDREGKIVKLTR 132 (159)
Confidence 7778888888777 588999998999999999 567999999999999998753
No 83
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.82 E-value=1.6e-20 Score=165.24 Aligned_cols=116 Identities=14% Similarity=0.109 Sum_probs=103.0
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
+|.++|+|++ +.+|+ .+++++++||+++|+|| ++|||+|..++|.|++++++| . +++||+|++| +
T Consensus 23 ~g~~~P~f~l~~~~G~-~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~---------~v~vv~Is~d-~ 89 (171)
T 2yzh_A 23 VGDRAPEAVVVTKDLQ-EKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--E---------GVDVTVVSMD-L 89 (171)
T ss_dssp TTSBCCCEEEEETTSC-EEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T---------TEEEEEEESS-C
T ss_pred CCCcCCceEEECCCCC-EeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--C---------CceEEEEeCC-C
Confidence 5889999999 99999 99999999999999999 799999999999999999988 4 6999999998 5
Q ss_pred HHHHHHHHhcCCccccccCCc-chhHHHHhcCcCc---------cceEEEECCCCcEEeccc
Q 014225 280 QTSFESYFGTMPWLALPFGDP-TIKELTKYFDVQG---------IPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~v~~---------~P~~~lid~~G~i~~~~~ 331 (428)
.+..++|.++++.-++|+..| ....+ +.|++.. +|++||||++|+|++++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~ 150 (171)
T 2yzh_A 90 PFAQKRFCESFNIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQL 150 (171)
T ss_dssp HHHHHHHHHHTTCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred HHHHHHHHHHcCCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEe
Confidence 677888888877337888888 67888 9999862 699999999999999864
No 84
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.82 E-value=2.8e-20 Score=166.09 Aligned_cols=141 Identities=17% Similarity=0.192 Sum_probs=116.7
Q ss_pred hccCCCCccc-CCCCC---ceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEc
Q 014225 202 LTNHDRGYLL-GHPPD---EKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 276 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~---~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~ 276 (428)
+|.++|+|++ +.+|. +.+++++++||++||+|| ++||++|+.++|.|.+++++|+++ ++.|++|++
T Consensus 3 ~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~vs~ 73 (187)
T 1we0_A 3 IGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL---------GVEVYSVST 73 (187)
T ss_dssp TTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT---------TEEEEEEES
T ss_pred CCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc---------CCEEEEEEC
Confidence 5889999999 77765 279999999999999999 999999999999999999999876 799999999
Q ss_pred CCCHHHHHHHHhcCC---ccccccCCcchhHHHHhcCcC------ccceEEEECCCCcEEeccccchhhcccccCCCCCh
Q 014225 277 DRDQTSFESYFGTMP---WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTE 347 (428)
Q Consensus 277 d~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~ 347 (428)
|. .+..++|.+.+. .++||+..|....+++.|++. ++|+++|||++|+|+.+..+.. .. +
T Consensus 74 d~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~-------~~---~ 142 (187)
T 1we0_A 74 DT-HFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINAD-------GI---G 142 (187)
T ss_dssp SC-HHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT-------TS---C
T ss_pred CC-HHHHHHHHHHhccccCCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCC-------CC---C
Confidence 85 677888888773 367888888888999999998 9999999999999999854321 10 1
Q ss_pred HHHHHHHHHHHHHHh
Q 014225 348 AKLEFLEKQMEEEAK 362 (428)
Q Consensus 348 ~~~~~L~~~l~~~~~ 362 (428)
...++|.+.|++++.
T Consensus 143 ~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 143 RDASTLINKVKAAQY 157 (187)
T ss_dssp CCTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhh
Confidence 123566667766654
No 85
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.82 E-value=7.9e-20 Score=156.87 Aligned_cols=117 Identities=24% Similarity=0.337 Sum_probs=104.7
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYR 115 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~ 115 (428)
.+|..+|+| |.+ +|+++++++++||+++|+||++||++|+.++|.|+++++++++.+ +.+++|++|.+.+.+++++
T Consensus 4 ~~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~v~v~~d~~~~~~~~~~ 80 (152)
T 3gl3_A 4 DKGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKG--FQVVAVNLDAKTGDAMKFL 80 (152)
T ss_dssp CTTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGT--EEEEEEECCSSHHHHHHHH
T ss_pred CCCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCC--eEEEEEECCCCHHHHHHHH
Confidence 368999999 999 999999999999999999999999999999999999999999987 9999999999999999999
Q ss_pred hcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 116 ACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 116 ~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+++++....+.+.+ ..+.+.|++.++|+++|||+ +|+++..
T Consensus 81 ~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 121 (152)
T 3gl3_A 81 AQVPAEFTVAFDPK--GQTPRLYGVKGMPTSFLIDR---NGKVLLQ 121 (152)
T ss_dssp HHSCCCSEEEECTT--CHHHHHTTCCSSSEEEEECT---TSBEEEE
T ss_pred HHcCCCCceeECCc--chhHHHcCCCCCCeEEEECC---CCCEEEE
Confidence 98875333333443 68999999999999999999 9998865
No 86
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.82 E-value=3e-20 Score=161.39 Aligned_cols=138 Identities=16% Similarity=0.159 Sum_probs=115.3
Q ss_pred hhccCCCCccc-CCCCCceecccccCCc--EEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEc
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGK--TVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 276 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk--~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~ 276 (428)
.+|.++|+|++ +.+|+ .+++++++|| ++||+|| ++|||+|..++|.|.+++++|+++ + +|++|++
T Consensus 8 ~~G~~~P~f~l~~~~G~-~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~---------~-~vv~is~ 76 (159)
T 2a4v_A 8 EIGDPIPDLSLLNEDND-SISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEY---------A-AVFGLSA 76 (159)
T ss_dssp CTTCBCCSCEEECTTSC-EEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT---------C-EEEEEES
T ss_pred CCCCCCCCeEEECCCCC-EEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC---------C-cEEEEeC
Confidence 36899999999 99999 9999999987 8999997 899999999999999999999876 6 9999999
Q ss_pred CCCHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccc------eEEEECCCCcEEeccccchhhcccccCCCCChHHH
Q 014225 277 DRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIP------CLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKL 350 (428)
Q Consensus 277 d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P------~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~ 350 (428)
| +.+..++|.++++ ++||++.|....+.+.||+...| ++||| ++|+|++++.+. ......
T Consensus 77 d-~~~~~~~~~~~~~-~~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~~g~-----------~~~~~~ 142 (159)
T 2a4v_A 77 D-SVTSQKKFQSKQN-LPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKRVKI-----------SPEVSV 142 (159)
T ss_dssp C-CHHHHHHHHHHHT-CSSEEEECTTCHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEEESC-----------CHHHHH
T ss_pred C-CHHHHHHHHHHhC-CCceEEECCccHHHHHhCCcccccCCccceEEEE-cCCEEEEEEccC-----------CccccH
Confidence 9 6778888888776 57888888888999999999988 89999 999999985331 122344
Q ss_pred HHHHHHHHHHHhc
Q 014225 351 EFLEKQMEEEAKN 363 (428)
Q Consensus 351 ~~L~~~l~~~~~~ 363 (428)
+.+.+.|.++++.
T Consensus 143 ~~~~~~l~~~l~~ 155 (159)
T 2a4v_A 143 NDAKKEVLEVAEK 155 (159)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5555666555553
No 87
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.82 E-value=7.2e-20 Score=165.60 Aligned_cols=140 Identities=16% Similarity=0.147 Sum_probs=117.0
Q ss_pred hhccCCCCccc-CC--CC--CceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 014225 201 LLTNHDRGYLL-GH--PP--DEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 274 (428)
Q Consensus 201 ~~g~~~p~f~l-~~--~g--~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~i 274 (428)
.+|.++|+|++ +. +| + .+++++++||++||+|| ++||++|..++|.|.+++++|++. +++||+|
T Consensus 7 ~~G~~aP~f~l~~~~~~g~~~-~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~---------~v~vi~I 76 (202)
T 1uul_A 7 EDLHPAPDFNETALMPNGTFK-KVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI---------GCEVLAC 76 (202)
T ss_dssp CTTSBCCCCEEEEECTTSCEE-EEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT---------TEEEEEE
T ss_pred cCCCcCCCcEeeeeecCCCcc-EEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC---------CCEEEEE
Confidence 36999999999 76 78 7 99999999999999999 999999999999999999999876 7999999
Q ss_pred EcCCCHHHHHHHHhcC----C--ccccccCCcchhHHHHhcCcC------ccceEEEECCCCcEEeccccchhhcccccC
Q 014225 275 STDRDQTSFESYFGTM----P--WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQGRNLINLYQENA 342 (428)
Q Consensus 275 s~d~~~~~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~ 342 (428)
++| +.+..++|.+.. + .++||+..|....+++.|++. ++|++||||++|+|+++..+.. .
T Consensus 77 s~D-~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~-------~ 148 (202)
T 1uul_A 77 SMD-SEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDL-------P 148 (202)
T ss_dssp ESS-CHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECT-------T
T ss_pred eCC-CHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCC-------C
Confidence 998 566788888876 1 478888888889999999999 9999999999999999853321 1
Q ss_pred CCCChHHHHHHHHHHHHHH
Q 014225 343 YPFTEAKLEFLEKQMEEEA 361 (428)
Q Consensus 343 ~p~~~~~~~~L~~~l~~~~ 361 (428)
.. ...++|.+.|+++.
T Consensus 149 ~~---~~~~ell~~l~~l~ 164 (202)
T 1uul_A 149 VG---RDVDEALRLVKAFQ 164 (202)
T ss_dssp BC---CCHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHhh
Confidence 11 23466666676655
No 88
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.82 E-value=1.5e-19 Score=158.31 Aligned_cols=137 Identities=17% Similarity=0.291 Sum_probs=110.7
Q ss_pred CCccc-CCCCCceecccccCCcEEEEEEeccCChh-HHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC---CHH
Q 014225 207 RGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---DQT 281 (428)
Q Consensus 207 p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~-C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~---~~~ 281 (428)
|+|++ +.+|+ .+++++++||++||+||++||++ |+.++|.|++++++|++. ....+++||+|++|. +.+
T Consensus 7 p~f~l~~~~G~-~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~-----~~~~~v~vv~is~d~~~d~~~ 80 (171)
T 2rli_A 7 GDFHLLDHRGR-ARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAE-----PGLPPVQPVFITVDPERDDVE 80 (171)
T ss_dssp SCCEEEETTSC-EEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHS-----TTSCCEEEEEEESCSTTCCHH
T ss_pred CCeEEEeCCCC-EEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhc-----cCCCceEEEEEEECCCCCCHH
Confidence 89999 99999 99999999999999999999998 999999999999999751 001379999999984 578
Q ss_pred HHHHHHhcCCccccccCCc---chhHHHHhcCcCccc---------------eEEEECCCCcEEeccccchhhcccccCC
Q 014225 282 SFESYFGTMPWLALPFGDP---TIKELTKYFDVQGIP---------------CLVIIGPEGKTVTKQGRNLINLYQENAY 343 (428)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~v~~~P---------------~~~lid~~G~i~~~~~~~~~~~~g~~~~ 343 (428)
.+++|.++++ ..++++.+ ....+++.|++..+| ++||||++|+|+.+..+.
T Consensus 81 ~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~---------- 149 (171)
T 2rli_A 81 AMARYVQDFH-PRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRS---------- 149 (171)
T ss_dssp HHHHHHHTTC-TTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESS----------
T ss_pred HHHHHHHHcC-CCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCC----------
Confidence 8999998876 45555443 345789999999888 999999999999975431
Q ss_pred CCChHHHHHHHHHHHHHHhcC
Q 014225 344 PFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 344 p~~~~~~~~L~~~l~~~~~~~ 364 (428)
.+ .++|.+.|+++++..
T Consensus 150 -~~---~~~l~~~l~~ll~~~ 166 (171)
T 2rli_A 150 -RS---AEQISDSVRRHMAAF 166 (171)
T ss_dssp -CC---HHHHHHHHHHHHHHH
T ss_pred -CC---HHHHHHHHHHHHHHH
Confidence 22 256677777776643
No 89
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.81 E-value=2e-20 Score=162.10 Aligned_cols=121 Identities=16% Similarity=0.153 Sum_probs=101.5
Q ss_pred ccccccccCc-ccc-CCCCEEecccCCCCEEEEEEecCCChhhhhh-HHHHHHHHHHHhcCCCcEEEEEEecC------C
Q 014225 36 SLLASKDRDY-LLN-QHGTQVKVSDLEGKVTALYFSANWYPPCGNF-TGVLVDVYEELRNNGSDFEVVFVSSD------E 106 (428)
Q Consensus 36 ~~~g~~~pdf-l~~-~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~ii~vs~D------~ 106 (428)
++.|.++|+| +.+ .+|+++++++++||+++|+||++||++|+.+ +|.|++++++|++++ +.+++|++| .
T Consensus 3 ~~~g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~--v~~v~v~~~~~~~~~~ 80 (160)
T 3lor_A 3 SLDNAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQ--VQVIGLHSVFEHHDVM 80 (160)
T ss_dssp -CTTCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTT--EEEEEEECCCSCGGGS
T ss_pred ccCCCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCC--cEEEEEeccccccccC
Confidence 4578999999 888 8999999999999999999999999999995 999999999998876 999999984 6
Q ss_pred ChHHHHHHHhcCCCceeccCChHH----HHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 107 DLNAFNNYRACMPWLAVPYSDLET----KKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~d~~~----~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.+.+++|++++++......+... ...+.+.|++.++|+++|||+ +|+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 136 (160)
T 3lor_A 81 TPEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADR---KGRIRQV 136 (160)
T ss_dssp CHHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECT---TSBEEEE
T ss_pred CHHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccceEEEECC---CCcEEEE
Confidence 788899999987743221112221 013899999999999999999 9998865
No 90
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.81 E-value=5.6e-20 Score=165.70 Aligned_cols=141 Identities=15% Similarity=0.182 Sum_probs=117.2
Q ss_pred hccCCCCccc-CC--CCC--ceeccccc-CCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 014225 202 LTNHDRGYLL-GH--PPD--EKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 274 (428)
Q Consensus 202 ~g~~~p~f~l-~~--~g~--~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~i 274 (428)
+|.++|+|++ +. +|+ +.++++++ +||++||+|| ++||++|+.++|.|.+++++|++. +++|++|
T Consensus 3 ~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~I 73 (198)
T 1zof_A 3 VTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK---------GFNVIGV 73 (198)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT---------TEEEEEE
T ss_pred CCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc---------CCEEEEE
Confidence 5899999999 87 774 37999999 9999999999 999999999999999999999876 7999999
Q ss_pred EcCCCHHHHHHHHhcC------CccccccCCcchhHHHHhcCcC-----ccceEEEECCCCcEEeccccchhhcccccCC
Q 014225 275 STDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTKQGRNLINLYQENAY 343 (428)
Q Consensus 275 s~d~~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~ 343 (428)
++| +.+..++|.+.. ..++||+..|....+.+.|++. ++|+++|||++|+|+.+..+..
T Consensus 74 s~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~--------- 143 (198)
T 1zof_A 74 SID-SEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDL--------- 143 (198)
T ss_dssp ESS-CHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESS---------
T ss_pred ECC-CHHHHHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCC---------
Confidence 999 467888888872 3367888888889999999999 9999999999999999853321
Q ss_pred CCChHHHHHHHHHHHHHHh
Q 014225 344 PFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 344 p~~~~~~~~L~~~l~~~~~ 362 (428)
+ .....++|.+.|+++..
T Consensus 144 ~-~~~~~~~l~~~l~~l~~ 161 (198)
T 1zof_A 144 P-LGRNADEMLRMVDALLH 161 (198)
T ss_dssp S-CCCHHHHHHHHHHHHHH
T ss_pred C-CCCCHHHHHHHHHHHHH
Confidence 1 11235677777776653
No 91
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.81 E-value=6.6e-20 Score=179.09 Aligned_cols=120 Identities=18% Similarity=0.208 Sum_probs=109.8
Q ss_pred hhccCCCCcc-----c-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 014225 201 LLTNHDRGYL-----L-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 274 (428)
Q Consensus 201 ~~g~~~p~f~-----l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~i 274 (428)
.+|.++|+|+ + +.+|+ .+++++++||+|||+||++||++|+.++|.|.+++++|+++ ++.||+|
T Consensus 52 ~vG~~aPdF~~~~~wL~d~dG~-~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~---------~v~vi~V 121 (352)
T 2hyx_A 52 ESCGTAPDLKGITGWLNTPGNK-PIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS---------GLAVIGV 121 (352)
T ss_dssp CCCCBCCCCCSCCEEESSGGGC-CCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---------TEEEEEE
T ss_pred CCCCcCCCccccccccCCCCCC-EEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC---------CeEEEEE
Confidence 3688999999 8 99999 99999999999999999999999999999999999999876 7999999
Q ss_pred EcC-----CCHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccc
Q 014225 275 STD-----RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 275 s~d-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
++| .+.+.+++|+++++ +.||+..|....+++.|+|.++|+++|||++|+|+.+..
T Consensus 122 s~d~~~~~d~~~~~~~~~~~~~-l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~ 182 (352)
T 2hyx_A 122 HTPEYAFEKVPGNVAKGAANLG-ISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKF 182 (352)
T ss_dssp ECCSSGGGGCHHHHHHHHHHHT-CCSCEEECTTSHHHHHTTCCEESEEEEECTTSBEEEEEE
T ss_pred ECCcccccCCHHHHHHHHHHcC-CCccEEeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEEc
Confidence 986 46788999998877 678888888889999999999999999999999998853
No 92
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.81 E-value=6.9e-20 Score=170.20 Aligned_cols=120 Identities=16% Similarity=0.180 Sum_probs=105.9
Q ss_pred hhccCCCCccc----CCCCCceecccccCCcEEEEEEec-cCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 201 LLTNHDRGYLL----GHPPDEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 201 ~~g~~~p~f~l----~~~g~~~v~l~~~~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
.+|.++|+|++ +.+|+ .+++++++||++||+||+ +||++|..++|.|.+++++|+++ +++||+||
T Consensus 49 ~vG~~aPdF~l~~~~d~~G~-~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~---------gv~vv~Is 118 (240)
T 3qpm_A 49 KISKPAPQWEGTAVINGEFK-ELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI---------NTEVVACS 118 (240)
T ss_dssp CTTSBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT---------TEEEEEEE
T ss_pred CCCCCCCCcEeeeeeCCCCc-EEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 47999999996 44567 999999999999999998 99999999999999999999876 89999999
Q ss_pred cCCCHHHHHHHHhcC------CccccccCCcchhHHHHhcCcC------ccceEEEECCCCcEEeccc
Q 014225 276 TDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 276 ~d~~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~ 331 (428)
+| +.+..++|.... ..++||++.|....+++.||+. .+|++||||++|+|+++..
T Consensus 119 ~D-~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~ 185 (240)
T 3qpm_A 119 VD-SQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITM 185 (240)
T ss_dssp SS-CHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred CC-CHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEe
Confidence 98 456777777765 2478999999889999999997 7899999999999999853
No 93
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.81 E-value=5.3e-20 Score=163.33 Aligned_cols=123 Identities=14% Similarity=0.170 Sum_probs=99.1
Q ss_pred hhhhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 199 INLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 199 ~~~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
.+..|..+|+|++ +.+|+ .+++++++||+|||+||++|||+|+.++|.|.+++++|+++ ++.|++|++|
T Consensus 11 ~~~~~~~~p~f~l~d~~G~-~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~---------~~~vi~is~d 80 (180)
T 3kij_A 11 LKPKINSFYAFEVKDAKGR-TVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS---------HFSVLAFPCN 80 (180)
T ss_dssp CCCCCCCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT---------SEEEEEEECC
T ss_pred hcCCcCcccceEEecCCCC-EecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC---------CeEEEEEECC
Confidence 3456889999999 99999 99999999999999999999999999999999999999876 7999999987
Q ss_pred C-------CHHHHHHHHhc-CCccccccCC-----cchh-HHHHhc--CcCccce----EEEECCCCcEEecccc
Q 014225 278 R-------DQTSFESYFGT-MPWLALPFGD-----PTIK-ELTKYF--DVQGIPC----LVIIGPEGKTVTKQGR 332 (428)
Q Consensus 278 ~-------~~~~~~~~~~~-~~~~~~~~~~-----d~~~-~~~~~~--~v~~~P~----~~lid~~G~i~~~~~~ 332 (428)
. +.+++++|++. .+ +.||+.. +... .+...+ .+.++|+ +||||++|+|+.+..+
T Consensus 81 ~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g 154 (180)
T 3kij_A 81 QFGESEPRPSKEVESFARKNYG-VTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRP 154 (180)
T ss_dssp CSTTCCCSCHHHHHHHHHHHHC-CCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECT
T ss_pred ccccCCCCCHHHHHHHHHHhcC-CCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECC
Confidence 5 77889999887 55 5566532 1111 111111 1246888 9999999999988644
No 94
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.81 E-value=3.5e-20 Score=160.29 Aligned_cols=119 Identities=15% Similarity=0.166 Sum_probs=100.0
Q ss_pred ccccccCc-ccc--CCCCEEecccCCCCEEEEEEecCCChhhhhh-HHHHHHHHHHHhcCCCcEEEEEEecC------CC
Q 014225 38 LASKDRDY-LLN--QHGTQVKVSDLEGKVTALYFSANWYPPCGNF-TGVLVDVYEELRNNGSDFEVVFVSSD------ED 107 (428)
Q Consensus 38 ~g~~~pdf-l~~--~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~ii~vs~D------~~ 107 (428)
.|..+|+| |.+ .+|+++++++++||+++|+||++||++|+.+ +|.|++++++|++.+ +.+++|++| .+
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~--v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDK--VAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTT--EEEEEEECCCSCGGGSC
T ss_pred CCCcCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCC--EEEEEEEecccccccCC
Confidence 37889999 888 4889999999999999999999999999997 999999999998776 999999984 57
Q ss_pred hHHHHHHHhcCCCceeccCChHHH---HHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 108 LNAFNNYRACMPWLAVPYSDLETK---KALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
.+.+++|++++++....+.+.... ..+++.|++.++|+++|||+ +|+++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 133 (158)
T 3eyt_A 80 PISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDK---AGDLRAH 133 (158)
T ss_dssp HHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECT---TSEEEEE
T ss_pred HHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECC---CCCEEEE
Confidence 788999999877532222232210 16899999999999999999 9998765
No 95
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.81 E-value=7.2e-21 Score=165.26 Aligned_cols=117 Identities=18% Similarity=0.235 Sum_probs=94.6
Q ss_pred ccccccCc-cccCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHH
Q 014225 38 LASKDRDY-LLNQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYR 115 (428)
Q Consensus 38 ~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~ 115 (428)
+|+++||| |.+.+|++++|++++||+++|+|| ++||++|+.++|.|+++++++++.+ +++++||.|. .+..++|.
T Consensus 6 vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~--~~~v~vs~d~-~~~~~~~~ 82 (157)
T 4g2e_A 6 IGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVN--AVVLGISVDP-PFSNKAFK 82 (157)
T ss_dssp TTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCS--SEEEEEESSC-HHHHHHHH
T ss_pred CCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccC--ceEeeecccc-hhHHHHHH
Confidence 69999999 999999999999999999999999 9999999999999999999999887 9999999975 55678888
Q ss_pred hcCCCceeccCChHHHHHHHhhcCCC-----------CCceEEEEcCCCCCCCccccc
Q 014225 116 ACMPWLAVPYSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 116 ~~~~~~~~~~~d~~~~~~l~~~~~v~-----------~~P~~~lid~~~~dG~i~~~~ 162 (428)
+++++.+...+|.+ ..+++.||+. ..|+++|||+ +|+|++..
T Consensus 83 ~~~~~~~p~l~D~~--~~v~~~ygv~~~~~~~~~~~~~~p~tflID~---~G~I~~~~ 135 (157)
T 4g2e_A 83 EHNKLNFTILSDYN--REVVKKYNVAWEFPALPGYVLAKRAVFVIDK---EGKVRYKW 135 (157)
T ss_dssp HHTTCCSEEEECTT--SHHHHHTTCEEECTTSTTCEEECEEEEEECT---TSBEEEEE
T ss_pred HHcCCcEEEEEcCC--cHHHHHcCCccccccCCCcceeeeeEEEECC---CCEEEEEE
Confidence 88765322233544 7899999873 4688999999 99998664
No 96
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.81 E-value=3.9e-20 Score=164.95 Aligned_cols=120 Identities=9% Similarity=0.061 Sum_probs=98.2
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC--
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR-- 278 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~-- 278 (428)
+|.++|+|++ +.+|+ .+++++++||++||+||++|||+|+.++|.|++++++|+++ +++|++|++|.
T Consensus 25 ~g~~~p~f~l~~~~G~-~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~---------~v~vv~is~d~~~ 94 (185)
T 2gs3_A 25 CARSMHEFSAKDIDGH-MVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC---------GLRILAFPCNQFG 94 (185)
T ss_dssp GCCCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCTTT
T ss_pred CCCCcCCceeEcCCCC-EeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC---------CeEEEEEECcccC
Confidence 5889999999 99999 99999999999999999999999999999999999999876 79999999873
Q ss_pred -----CHHHHHHHHhcCCccccccCC--cchhH----HHHhc-------Cc-----CccceEEEECCCCcEEecccc
Q 014225 279 -----DQTSFESYFGTMPWLALPFGD--PTIKE----LTKYF-------DV-----QGIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 279 -----~~~~~~~~~~~~~~~~~~~~~--d~~~~----~~~~~-------~v-----~~~P~~~lid~~G~i~~~~~~ 332 (428)
+.+++++|+++.+ +.||+.. |.... +...+ ++ ..+|++||||++|+|+.+..+
T Consensus 95 ~~~~~~~~~~~~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g 170 (185)
T 2gs3_A 95 KQEPGSNEEIKEFAAGYN-VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP 170 (185)
T ss_dssp TCCCSCHHHHHHHHHHTT-CCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECT
T ss_pred CCCCCCHHHHHHHHHHcC-CCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCC
Confidence 4678888888776 4567654 32222 22111 43 346999999999999998543
No 97
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.81 E-value=6.4e-20 Score=158.02 Aligned_cols=116 Identities=20% Similarity=0.327 Sum_probs=102.0
Q ss_pred hhccCCCCccc-CCCC--------CceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEE
Q 014225 201 LLTNHDRGYLL-GHPP--------DEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEV 271 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g--------~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i 271 (428)
.+|.++|+|.+ +.+| + .+++++++||+++|+||++||++|+.+.|.|.+++++ . ++.+
T Consensus 9 ~~g~~~p~f~l~~~~g~~~~~~~~~-~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~---------~v~~ 75 (156)
T 1kng_A 9 LIGRPAPQTALPPLEGLQADNVQVP-GLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---K---------RFQL 75 (156)
T ss_dssp ---CBCCCCCBCCCTTCEETTEECC-CBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---T---------TSEE
T ss_pred HhCCCCCCceeeeccCcccccccCc-eechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---C---------CeEE
Confidence 46999999999 9998 8 9999999999999999999999999999999988765 2 5899
Q ss_pred EEEEcCCCHHHHHHHHhcCCccccc-cCCcchhHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 272 VFVSTDRDQTSFESYFGTMPWLALP-FGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 272 v~is~d~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
++|++|.+.+.+++|....+ +.++ +..|....+++.|++.++|+++|||++|+++.+.
T Consensus 76 v~v~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~~~P~~~~id~~G~i~~~~ 134 (156)
T 1kng_A 76 VGINYKDAADNARRFLGRYG-NPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKL 134 (156)
T ss_dssp EEEEESCCHHHHHHHHHHHC-CCCSEEEEETTSHHHHHTTCCSSCEEEEECTTSBEEEEE
T ss_pred EEEECCCCHHHHHHHHHHcC-CCCceeeeCchhHHHHhcCcCccCeEEEEcCCCCEEEEE
Confidence 99999999999999998876 4566 5667778999999999999999999999999874
No 98
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.81 E-value=3.1e-20 Score=167.86 Aligned_cols=117 Identities=13% Similarity=0.152 Sum_probs=105.2
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
+|.++|+|++ +.+|+ .+++++++||+|+|+|| ++||++|..++|.|++++++| + +++||+||.| +
T Consensus 54 ~G~~aPdf~l~d~~G~-~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~---------~v~vv~Is~D-~ 120 (200)
T 3zrd_A 54 IGDKAKDFTLVAKDLS-DVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--E---------NTVVLCISSD-L 120 (200)
T ss_dssp TTCBCCCCEEECTTSC-EEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--T---------TEEEEEEESS-C
T ss_pred CCCCCCCeEEECCCCC-EEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--C---------CCEEEEEECC-C
Confidence 5899999999 99999 99999999999999999 689999999999999999998 4 6999999998 6
Q ss_pred HHHHHHHHhcCCccccccCCcc-hhHHHHhcCcC---------ccceEEEECCCCcEEeccc
Q 014225 280 QTSFESYFGTMPWLALPFGDPT-IKELTKYFDVQ---------GIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~v~---------~~P~~~lid~~G~i~~~~~ 331 (428)
.+.+++|.++.+.-.||+..|. ...+++.||+. .+|++||||++|+|++++.
T Consensus 121 ~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~ 182 (200)
T 3zrd_A 121 PFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSEL 182 (200)
T ss_dssp HHHHTTCTTTTTCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred HHHHHHHHHHcCCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEe
Confidence 7788888888763388888888 89999999996 3699999999999999864
No 99
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.81 E-value=3.9e-20 Score=164.57 Aligned_cols=120 Identities=10% Similarity=0.095 Sum_probs=99.9
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC-
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 278 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~- 278 (428)
.+|.++|+|++ +.+|+ .+++++++||++||+||++||++|+.++|.|++++++|+++ +++|++|++|.
T Consensus 22 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~---------~v~vv~vs~d~~ 91 (183)
T 2obi_A 22 RCARSMHEFSAKDIDGH-MVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC---------GLRILAFPCNQF 91 (183)
T ss_dssp GGCCSGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred cccCcccceEEEcCCCC-EeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC---------CeEEEEEECCCC
Confidence 46999999999 99999 99999999999999999999999999999999999999876 79999999973
Q ss_pred ------CHHHHHHHHhcCCccccccCC--cchhH----HHHhc-------C-----cCccceEEEECCCCcEEeccc
Q 014225 279 ------DQTSFESYFGTMPWLALPFGD--PTIKE----LTKYF-------D-----VQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 279 ------~~~~~~~~~~~~~~~~~~~~~--d~~~~----~~~~~-------~-----v~~~P~~~lid~~G~i~~~~~ 331 (428)
+.+++++|.++++ ++||+.. |.... +.+.+ + +..+|++||||++|+|+.+..
T Consensus 92 ~~~e~~~~~~~~~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~ 167 (183)
T 2obi_A 92 GKQEPGSNEEIKEFAAGYN-VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYG 167 (183)
T ss_dssp TTCCCSCHHHHHHHHHTTT-CCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHcC-CCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeC
Confidence 6788999998876 5677654 33332 22211 4 445799999999999999854
No 100
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.70 E-value=1.4e-21 Score=165.91 Aligned_cols=122 Identities=33% Similarity=0.691 Sum_probs=108.3
Q ss_pred CCCCccc-CCCCCceecccc-cCCc-EEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHH
Q 014225 205 HDRGYLL-GHPPDEKVPVSS-LVGK-TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 281 (428)
Q Consensus 205 ~~p~f~l-~~~g~~~v~l~~-~~gk-~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~ 281 (428)
.+|+|++ +.+|+ .+++++ ++|| +++|+||++||++|+.++|.|.++++++++. +.++.+++|++|.+.+
T Consensus 3 ~~p~~~l~~~~g~-~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~-------~~~~~v~~v~~d~~~~ 74 (143)
T 2lus_A 3 FIQGIKLVKKNRC-EVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDD-------SAPFEIIFVSSDRSED 74 (143)
Confidence 4689999 99999 999999 9999 9999999999999999999999999999643 3479999999998888
Q ss_pred HHHHHHhcC--CccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccch
Q 014225 282 SFESYFGTM--PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNL 334 (428)
Q Consensus 282 ~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~ 334 (428)
.+++|+..+ +|..+++..+....+++.|+|.++|+++|||++|+++.++++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~ 129 (143)
T 2lus_A 75 DMFQYMMESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGE 129 (143)
Confidence 899998876 46677777777789999999999999999999999999976644
No 101
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.81 E-value=2.3e-18 Score=160.34 Aligned_cols=197 Identities=16% Similarity=0.142 Sum_probs=126.9
Q ss_pred CCEEEEEEecCC--ChhhhhhHHHHHHHHHHHhc-CCCc--EEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHH
Q 014225 61 GKVTALYFSANW--YPPCGNFTGVLVDVYEELRN-NGSD--FEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALN 135 (428)
Q Consensus 61 gk~vlv~F~a~w--C~~C~~~~p~l~~l~~~~~~-~~~~--~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~ 135 (428)
+++|+|.||++| |++|+...|.+.++++.+.. +| + +.++.++.|.. ..++
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~-~~~v~~~~vd~d~~------------------------~~~~ 79 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNG-GKLLKLNVYYRESD------------------------SDKF 79 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETT-EESEEEEEEETTTT------------------------HHHH
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCC-CceeEEEEecCCcC------------------------HHHH
Confidence 468999999999 99999999999999987522 22 2 55555544322 7789
Q ss_pred hhcCCCCCceEEEEcCCCCCCCcccccchhhhhhcccCccccchhhHHHHHHHHHHHHHHHHHhhhhccCCCCcccCCCC
Q 014225 136 RKFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGHPP 215 (428)
Q Consensus 136 ~~~~v~~~P~~~lid~~~~dG~i~~~~~~~~i~~~g~~~~p~t~~~~~~l~~~~~~~~~~~~~~~~~g~~~p~f~l~~~g 215 (428)
+.|+|.++|++.++ . | ..... |. +........+..... . +...+. + +.
T Consensus 80 ~~~gv~~~Pt~~i~-~----g-~~~~~--------G~---~~~~~l~~fv~~~l~----------~-~~~~~~--l--~~ 127 (243)
T 2hls_A 80 SEFKVERVPTVAFL-G----G-EVRWT--------GI---PAGEEIRALVEVIMR----------L-SEDESG--L--ED 127 (243)
T ss_dssp HHTTCCSSSEEEET-T----T-TEEEE--------SC---CCTTHHHHHHHHHHH----------H-HTTCCC--C--CH
T ss_pred HhcCCCcCCEEEEE-C----C-ceeEc--------CC---CcHHHHHHHHHHHHh----------c-cCCCCC--C--CH
Confidence 99999999999888 3 3 11111 11 000111111111100 0 001010 1 00
Q ss_pred CceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCcccc
Q 014225 216 DEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLAL 295 (428)
Q Consensus 216 ~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~ 295 (428)
...-.+.++.|+++++.||++|||+|+.+.|.|++++..++... .+++.+..|.++..
T Consensus 128 ~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~------~~~v~~~~vd~~~~---------------- 185 (243)
T 2hls_A 128 ATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQG------NPVILSEAVEAYEN---------------- 185 (243)
T ss_dssp HHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTT------CCCEEEEEEETTTC----------------
T ss_pred HHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHccccc------CCcEEEEEEECccC----------------
Confidence 00011234668889999999999999999999999999885210 13688888887754
Q ss_pred ccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 296 PFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 296 ~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
.++++.|+|.++||+++ +|++++.+.. + .++|.+.|.+.+.
T Consensus 186 -------~~~~~~~~V~~vPt~~i---~G~~~~~G~~-------------~---~~~l~~~l~~~~~ 226 (243)
T 2hls_A 186 -------PDIADKYGVMSVPSIAI---NGYLVFVGVP-------------Y---EEDFLDYVKSAAE 226 (243)
T ss_dssp -------HHHHHHTTCCSSSEEEE---TTEEEEESCC-------------C---HHHHHHHHHHHHT
T ss_pred -------HHHHHHcCCeeeCeEEE---CCEEEEeCCC-------------C---HHHHHHHHHHHhh
Confidence 57888999999999988 7887644321 1 3567777777765
No 102
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.81 E-value=1.2e-19 Score=166.39 Aligned_cols=141 Identities=17% Similarity=0.214 Sum_probs=117.4
Q ss_pred hhccCCCCccc-C---CCCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 201 LLTNHDRGYLL-G---HPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 201 ~~g~~~p~f~l-~---~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
.+|.++|+|++ + .+|+ .+++++++||++||+|| ++|||+|+.++|.|.+++++|+++ +++||+|+
T Consensus 28 ~~G~~aP~f~l~~~~~~~g~-~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~---------~v~vv~Is 97 (220)
T 1zye_A 28 AVTQHAPYFKGTAVVSGEFK-EISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV---------NCEVVAVS 97 (220)
T ss_dssp CTTSBCCCCEEEEECSSSEE-EEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT---------TEEEEEEE
T ss_pred cCCCCCCCcEEEeeeCCCCc-EEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 46999999998 4 4677 99999999999999999 999999999999999999999876 79999999
Q ss_pred cCCCHHHHHHHHhcC----C--ccccccCCcchhHHHHhcCcC------ccceEEEECCCCcEEeccccchhhcccccCC
Q 014225 276 TDRDQTSFESYFGTM----P--WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQGRNLINLYQENAY 343 (428)
Q Consensus 276 ~d~~~~~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~ 343 (428)
+| +.+..++|.+.. + .++||+..|....+++.|++. .+|++||||++|+|+++..+.. .
T Consensus 98 ~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~-------~- 168 (220)
T 1zye_A 98 VD-SHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDL-------P- 168 (220)
T ss_dssp SS-CHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT-------T-
T ss_pred CC-CHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEEecCC-------C-
Confidence 99 566777887765 1 468888888889999999999 9999999999999999853321 1
Q ss_pred CCChHHHHHHHHHHHHHHh
Q 014225 344 PFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 344 p~~~~~~~~L~~~l~~~~~ 362 (428)
.....+++.+.|+++..
T Consensus 169 --~~~~~~ell~~l~~l~~ 185 (220)
T 1zye_A 169 --VGRSVEETLRLVKAFQF 185 (220)
T ss_dssp --CCCCHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHhhh
Confidence 11234677777777664
No 103
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.81 E-value=9.9e-20 Score=156.61 Aligned_cols=119 Identities=24% Similarity=0.392 Sum_probs=103.8
Q ss_pred ccccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCC-hHHHHH
Q 014225 36 SLLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDED-LNAFNN 113 (428)
Q Consensus 36 ~~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~-~~~~~~ 113 (428)
+.+|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|+++++++++.+ +.+++|++|.+ .+.+++
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~--~~~v~v~~d~~~~~~~~~ 79 (154)
T 3kcm_A 2 SLEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKP--FRMLCVSIDEGGKVAVEE 79 (154)
T ss_dssp -CTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSS--EEEEEEECCTTHHHHHHH
T ss_pred CCCCCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCC--eEEEEEEcCCcchHHHHH
Confidence 3579999999 9999999999999999999999999999999999999999999998876 99999999987 788899
Q ss_pred HHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 114 YRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 114 ~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+++++++....+.+.+ ..+.+.|++.++|+++|||+ +|+++..
T Consensus 80 ~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 122 (154)
T 3kcm_A 80 FFRKTGFTLPVLLDAD--KRVGKLYGTTGVPETFVIDR---HGVILKK 122 (154)
T ss_dssp HHHHHCCCCCEEECTT--CHHHHHHTCCSBCEEEEECT---TSBEEEE
T ss_pred HHHHcCCCeeEEecCc--hHHHHHhCCCCCCeEEEECC---CCcEEEE
Confidence 9987664322222433 67999999999999999999 9998765
No 104
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.81 E-value=3.2e-20 Score=161.43 Aligned_cols=116 Identities=15% Similarity=0.249 Sum_probs=102.2
Q ss_pred ccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC----
Q 014225 203 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD---- 277 (428)
Q Consensus 203 g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d---- 277 (428)
+..+| .+ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|+.. ++.||+|++|
T Consensus 17 ~~~~p--~l~~~~g~-~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~~~~~~ 84 (164)
T 2h30_A 17 PHTMS--TMKTADNR-PASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS---------SANLITVASPGFLH 84 (164)
T ss_dssp HHHHT--TCEETTSS-BGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT---------TSEEEEEECTTSTT
T ss_pred CCcCC--ccCCCCCC-EeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC---------CcEEEEEEcCCCcc
Confidence 44445 66 89999 99999999999999999999999999999999999998766 7999999985
Q ss_pred -CCHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 278 -RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 278 -~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
.+.+.+.+|+...++..+++..|....+++.|+|.++|+++|||++|+++.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 138 (164)
T 2h30_A 85 EKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIV 138 (164)
T ss_dssp CCCTTHHHHHHTTSCCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEE
T ss_pred ccCHHHHHHHHHhCCCCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEE
Confidence 34678889888877655788778888999999999999999999999999874
No 105
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.81 E-value=5e-20 Score=160.71 Aligned_cols=118 Identities=15% Similarity=0.218 Sum_probs=105.9
Q ss_pred hhccCCCCccc---CCCC--Cceecccc-cCCcEEEEEEe-ccCChhHH-hhhHHHHHHHHHHHhhhhhcCCCCCCEE-E
Q 014225 201 LLTNHDRGYLL---GHPP--DEKVPVSS-LVGKTVGLYFS-ARWCIPCE-KFMPKLLSIYQKIKQNLVEKGDALEDFE-V 271 (428)
Q Consensus 201 ~~g~~~p~f~l---~~~g--~~~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~-i 271 (428)
.+|.++|+|++ +.+| + .+++++ ++||+++|+|| ++|||+|. .++|.|++++++|+++ +++ |
T Consensus 5 ~~G~~aP~f~l~~~~~~G~~~-~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~---------~v~~v 74 (162)
T 1tp9_A 5 AVGDVLPDGKLAYFDEQDQLQ-EVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK---------GVTEI 74 (162)
T ss_dssp CTTCBCCCCEEEEECTTSCEE-EEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT---------TCCCE
T ss_pred CCCCCCCCeEEEeecCCCCce-eEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC---------CCCEE
Confidence 36899999986 7899 8 999999 99999999999 89999999 9999999999999876 799 9
Q ss_pred EEEEcCCCHHHHHHHHhcCCcc-ccccCCcchhHHHHhcCcC-----------ccceEEEECCCCcEEecc
Q 014225 272 VFVSTDRDQTSFESYFGTMPWL-ALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 272 v~is~d~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~ 330 (428)
++||+| +.+..++|.++.+.- +||++.|.+..+++.||+. .+|++|||| +|+|++.+
T Consensus 75 v~Is~d-~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~ 143 (162)
T 1tp9_A 75 LCISVN-DPFVMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAAN 143 (162)
T ss_dssp EEEESS-CHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEE
T ss_pred EEEECC-CHHHHHHHHHhcCCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEE
Confidence 999998 677888999888733 6899889889999999986 279999999 99999985
No 106
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.81 E-value=6e-20 Score=168.20 Aligned_cols=118 Identities=14% Similarity=0.235 Sum_probs=103.9
Q ss_pred cccccccCc-cccCCCCEEecccCCCC-EEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC-------CC
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGK-VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-------ED 107 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D-------~~ 107 (428)
.+|..+|+| |.+.+|+++++++++|| +|||+||++||++|+.++|.|++++++|++.+ +++|+|++| .+
T Consensus 33 ~~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Vs~d~~~~~~~d~ 110 (218)
T 3u5r_E 33 TLGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQG--LAVVAINSNDAQAFPEET 110 (218)
T ss_dssp CTTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTT--EEEEEEECSCTTTCGGGS
T ss_pred CCCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCC--cEEEEEECCcccccccCC
Confidence 469999999 99999999999999999 59999999999999999999999999999887 999999997 67
Q ss_pred hHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 108 LNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
.+.+++|.+++++....+.|.+ ..+++.|++.++|+++|||+ +|+++++
T Consensus 111 ~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~~v~~~P~~~liD~---~G~i~~~ 159 (218)
T 3u5r_E 111 LERVGAEVKAYGYGFPYLKDAS--QSVAKAYGAACTPDFFLYDR---ERRLVYH 159 (218)
T ss_dssp HHHHHHHHHHHTCCSCEEECTT--CHHHHHHTCCEESEEEEECT---TCBEEEE
T ss_pred HHHHHHHHHHhCCCccEEECCc--cHHHHHcCCCCCCeEEEECC---CCcEEEe
Confidence 7889999998764222222433 68999999999999999999 9999865
No 107
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.81 E-value=1.3e-19 Score=159.44 Aligned_cols=144 Identities=15% Similarity=0.179 Sum_probs=107.1
Q ss_pred HhhhhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCCh-hHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 198 LINLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCI-PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 198 ~~~~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~-~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
+...+|.++|+|+| |.+|+ .+++++++||+|||+||++||| +|...++.|.++++.+++. +.++.+|+||
T Consensus 4 ~~~P~~~~~PdF~L~d~~G~-~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~-------~~~v~~v~is 75 (170)
T 4hde_A 4 LRKPLNWDLETFQFTNQDGK-PFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEE-------KLDVQFVSFS 75 (170)
T ss_dssp CCSCCCBCCCCCEEECTTSC-EEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHT-------TCCCEEEEEE
T ss_pred cccCCCCcCCCcEEECCCCC-EEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcc-------cccceeEeee
Confidence 45567999999999 99999 9999999999999999999997 8999999999999999876 5679999999
Q ss_pred cCC---CHHHHHHHHhcCCc--cccccCCc-chhH----HHHhcC----------cCccceEEEECCCCcEEeccccchh
Q 014225 276 TDR---DQTSFESYFGTMPW--LALPFGDP-TIKE----LTKYFD----------VQGIPCLVIIGPEGKTVTKQGRNLI 335 (428)
Q Consensus 276 ~d~---~~~~~~~~~~~~~~--~~~~~~~d-~~~~----~~~~~~----------v~~~P~~~lid~~G~i~~~~~~~~~ 335 (428)
+|. +++.+++|.+.++. ..+.++.+ .... ....|+ +...|++||||++|+|+..+.+.
T Consensus 76 vDp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~-- 153 (170)
T 4hde_A 76 VDPDLDKPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGI-- 153 (170)
T ss_dssp SCTTTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESS--
T ss_pred cCcccccHHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCC--
Confidence 984 56788899887642 22222211 1111 222333 33457899999999999764321
Q ss_pred hcccccCCCCChHHHHHHHHHHHHHH
Q 014225 336 NLYQENAYPFTEAKLEFLEKQMEEEA 361 (428)
Q Consensus 336 ~~~g~~~~p~~~~~~~~L~~~l~~~~ 361 (428)
.....++|.+.|++++
T Consensus 154 ----------~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 154 ----------SNTPYEDIIRDMKRLA 169 (170)
T ss_dssp ----------SSCCHHHHHHHHHHHH
T ss_pred ----------CCCCHHHHHHHHHHHh
Confidence 1122466777777665
No 108
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.80 E-value=2.9e-19 Score=161.46 Aligned_cols=125 Identities=19% Similarity=0.293 Sum_probs=100.5
Q ss_pred hhhccCC--CCccc-CCCCCceecccccCCcEEEEEEeccCChh-HHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 200 NLLTNHD--RGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 200 ~~~g~~~--p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~-C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
..+|.++ |+|++ +.+|+ .+++++++||++||+||++||++ |..++|.|.++++++.++. +.++.||+|+
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~-~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~------~~~v~vv~Is 85 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGN-EFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKY------GITLQPLFIT 85 (200)
T ss_dssp ---CCCCCCCCCEEEETTSC-EEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEEE
T ss_pred hccCCCCcCCCEEEEcCCCC-EEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhh------CCceEEEEEE
Confidence 4568886 99999 99999 99999999999999999999997 9999999999999987531 2379999999
Q ss_pred cCC---CHHHHHHHHhcCC--ccccccCCcchhHHHHhcCcC-ccc---------------eEEEECCCCcEEeccc
Q 014225 276 TDR---DQTSFESYFGTMP--WLALPFGDPTIKELTKYFDVQ-GIP---------------CLVIIGPEGKTVTKQG 331 (428)
Q Consensus 276 ~d~---~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~v~-~~P---------------~~~lid~~G~i~~~~~ 331 (428)
+|. +.+.+++|...++ |..++...|....+++.|||. +.| ++||||++|+|+.+..
T Consensus 86 ~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~ 162 (200)
T 2b7k_A 86 CDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALG 162 (200)
T ss_dssp SCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeC
Confidence 995 6788999998765 333444445667899999997 444 7899999999998754
No 109
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.80 E-value=5.3e-20 Score=162.62 Aligned_cols=116 Identities=15% Similarity=0.136 Sum_probs=100.0
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccC-ChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARW-CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 279 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~w-C~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~ 279 (428)
+|.++|+|++ +.+|+ .+++++++||++||+||++| |++|+.++|.|.+++++ . +++||+|++| +
T Consensus 20 ~G~~~P~f~l~~~~G~-~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~---------~v~vv~Is~D-~ 85 (175)
T 1xvq_A 20 VGSPAPAFTLTGGDLG-VISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---S---------GATVLCVSKD-L 85 (175)
T ss_dssp TTSBCCCCEEECTTSC-EEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---T---------TCEEEEEESS-C
T ss_pred cCCcCCCeEEECCCCC-EEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---c---------CCEEEEEECC-C
Confidence 5889999999 99999 99999999999999999999 99999999999999988 3 5899999998 5
Q ss_pred HHHHHHHHhcCCccccccCCcchhHHHHhcCcCcc---------ceEEEECCCCcEEeccc
Q 014225 280 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGI---------PCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~---------P~~~lid~~G~i~~~~~ 331 (428)
.+..++|.++.++.+||+..|....+.+.|++... |++||||++|+|+++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~ 146 (175)
T 1xvq_A 86 PFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTEL 146 (175)
T ss_dssp HHHHTTCC------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEE
T ss_pred HHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEE
Confidence 56778888777644788888878899999999887 99999999999999863
No 110
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.80 E-value=3.3e-19 Score=162.62 Aligned_cols=136 Identities=14% Similarity=0.151 Sum_probs=104.3
Q ss_pred hccCCCCccc-CCC-CCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC-
Q 014225 202 LTNHDRGYLL-GHP-PDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 278 (428)
Q Consensus 202 ~g~~~p~f~l-~~~-g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~- 278 (428)
.+..+|+|++ +.+ |+ .+++++++||+|||+|||+||++|+ ++|.|++++++|+++ +++||+|++|.
T Consensus 31 ~~~~~pdF~l~d~~~G~-~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~---------g~~Vlgvs~d~f 99 (215)
T 2i3y_A 31 EKGTIYDYEAIALNKNE-YVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPY---------GLVVLGFPCNQF 99 (215)
T ss_dssp CCCCGGGCEEEBSSSSC-EEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred ccCCcCCcEeeeCCCCC-EEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC---------CeEEEEEEcccc
Confidence 3567899999 999 99 9999999999999999999999998 999999999999877 89999999862
Q ss_pred ------CHHHHHHHHh------cCCccccccCCcc--hh----H----HHHh-------cC--------------cCccc
Q 014225 279 ------DQTSFESYFG------TMPWLALPFGDPT--IK----E----LTKY-------FD--------------VQGIP 315 (428)
Q Consensus 279 ------~~~~~~~~~~------~~~~~~~~~~~d~--~~----~----~~~~-------~~--------------v~~~P 315 (428)
+.+++++|++ +++ ++||+..|. +. . +... ++ |...|
T Consensus 100 ~~~e~~~~~~i~~f~~~~~~~~~~~-~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~np 178 (215)
T 2i3y_A 100 GKQEPGDNKEILPGLKYVRPGGGFV-PSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNF 178 (215)
T ss_dssp TTCCCSCHHHHHHHHHHTSSCTTCC-CSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTT
T ss_pred CcCCCCCHHHHHHHHHhccchhccC-ccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCc
Confidence 4577888888 555 678876432 11 1 1111 11 22338
Q ss_pred eEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhc
Q 014225 316 CLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 316 ~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
++||||++|+|+.+..+. .. .++|++.|+++++.
T Consensus 179 ttfLID~~G~vv~~~~g~-----------~~---~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 179 EKFLVGPDGIPVMRWSHR-----------AT---VSSVKTDILAYLKQ 212 (215)
T ss_dssp CEEEECTTSCEEEEECTT-----------SC---HHHHHHHHHHHGGG
T ss_pred eEEEECCCCeEEEEeCCC-----------CC---HHHHHHHHHHHHHH
Confidence 999999999999985331 12 25677888877753
No 111
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.80 E-value=1.1e-19 Score=155.93 Aligned_cols=117 Identities=19% Similarity=0.327 Sum_probs=103.6
Q ss_pred cccccc-Cc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHH
Q 014225 38 LASKDR-DY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYR 115 (428)
Q Consensus 38 ~g~~~p-df-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~ 115 (428)
+|..+| +| +.+.+|+++++++++||+++|+||++||++|+.++|.|+++++++++.+ +.+++|+.|...+.+++++
T Consensus 5 ~G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~v~v~~d~~~~~~~~~~ 82 (152)
T 2lja_A 5 SGNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKD--IHFVSLSCDKNKKAWENMV 82 (152)
T ss_dssp TTCCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSS--EEEEEEECCSCHHHHHHHH
T ss_pred cCCCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCC--eEEEEEEccCcHHHHHHHH
Confidence 688999 99 9999999999999999999999999999999999999999999998766 9999999999988899999
Q ss_pred hcCCCceecc-CChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 116 ACMPWLAVPY-SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 116 ~~~~~~~~~~-~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++.++...++ .+.+ ..+.+.|++.++|+++|||+ +|+++..
T Consensus 83 ~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 124 (152)
T 2lja_A 83 TKDQLKGIQLHMGTD--RTFMDAYLINGIPRFILLDR---DGKIISA 124 (152)
T ss_dssp HHHTCCSEEEECSSC--THHHHHTTCCSSCCEEEECT---TSCEEES
T ss_pred HhcCCCCceeecCcc--hhHHHHcCcCCCCEEEEECC---CCeEEEc
Confidence 8766533332 1332 68999999999999999999 9998865
No 112
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.80 E-value=2.7e-19 Score=155.52 Aligned_cols=118 Identities=23% Similarity=0.363 Sum_probs=102.3
Q ss_pred ccccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHH
Q 014225 36 SLLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 36 ~~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
...|..+|+| +.+.+|+++++++++||+++|+||++||++|+.++|.|+++++++++.+ +.+++|++|.+.+.++++
T Consensus 8 ~~~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~--v~~v~v~~d~~~~~~~~~ 85 (165)
T 3or5_A 8 DARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRG--FTFVGIAVNEQLPNVKNY 85 (165)
T ss_dssp CCCCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTT--EEEEEEECSCCHHHHHHH
T ss_pred hcCCCCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCC--eEEEEEECCCCHHHHHHH
Confidence 3568999999 9999999999999999999999999999999999999999999999876 999999999999999999
Q ss_pred HhcCCCceeccCChHHHHHHHhhc------CCCCCceEEEEcCCCCCCCcccc
Q 014225 115 RACMPWLAVPYSDLETKKALNRKF------DIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 115 ~~~~~~~~~~~~d~~~~~~l~~~~------~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++++++....+.+. ..+.+.| ++.++|+++|||+ +|+++..
T Consensus 86 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~P~~~lid~---~G~i~~~ 132 (165)
T 3or5_A 86 MKTQGIIYPVMMAT---PELIRAFNGYIDGGITGIPTSFVIDA---SGNVSGV 132 (165)
T ss_dssp HHHHTCCSCEEECC---HHHHHHHHTTSTTCSCSSSEEEEECT---TSBEEEE
T ss_pred HHHcCCCCceEecC---HHHHHHHhhhhccCCCCCCeEEEECC---CCcEEEE
Confidence 98766432222233 3666666 8999999999999 9988754
No 113
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.80 E-value=2.3e-19 Score=157.40 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=105.0
Q ss_pred hccCCCCccc--CCCCCceeccccc-CCcEEEEEEe-ccCChhHHh-hhHHHHHHHHHHHhhhhhcCCCCCCE-EEEEEE
Q 014225 202 LTNHDRGYLL--GHPPDEKVPVSSL-VGKTVGLYFS-ARWCIPCEK-FMPKLLSIYQKIKQNLVEKGDALEDF-EVVFVS 275 (428)
Q Consensus 202 ~g~~~p~f~l--~~~g~~~v~l~~~-~gk~vll~F~-a~wC~~C~~-~~~~l~~l~~~~~~~~~~~~~~~~~~-~iv~is 275 (428)
+|.++|+|++ +.+|+ .++++++ +||++||+|| ++|||+|.. ++|.|++++++|+++ ++ +||+||
T Consensus 5 ~G~~aP~f~l~~~~~G~-~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~---------gv~~vv~Is 74 (167)
T 2wfc_A 5 EGDKLPAVTVFGATPND-KVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK---------GVDIIACMA 74 (167)
T ss_dssp TTCBCCCCEEESSSTTC-EEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT---------TCCEEEEEE
T ss_pred CCCcCCCcEeecCCCCc-EEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC---------CCCEEEEEe
Confidence 5899999998 78899 9999998 9999988887 999999999 999999999999877 89 999999
Q ss_pred cCCCHHHHHHHHhcCCccc--cccCCcchhHHHHhcCcCcc-----------ceEEEECCCCcEEeccc
Q 014225 276 TDRDQTSFESYFGTMPWLA--LPFGDPTIKELTKYFDVQGI-----------PCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 276 ~d~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~-----------P~~~lid~~G~i~~~~~ 331 (428)
.| +.+..++|.++.+ +. ||++.|.+.++++.||+... |++||| ++|+|++...
T Consensus 75 ~d-~~~~~~~~~~~~~-~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~~ 140 (167)
T 2wfc_A 75 VN-DSFVMDAWGKAHG-ADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVNV 140 (167)
T ss_dssp SS-CHHHHHHHHHHTT-CTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEEE
T ss_pred CC-CHHHHHHHHHhcC-CCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEEEe
Confidence 98 5778889988877 45 99999999999999999754 999999 9999999853
No 114
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.80 E-value=2.5e-19 Score=157.59 Aligned_cols=141 Identities=15% Similarity=0.123 Sum_probs=111.3
Q ss_pred hccCCC-Cccc-CCCCCceecccccCCcEEEEEEeccCCh-hHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC-
Q 014225 202 LTNHDR-GYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCI-PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 277 (428)
Q Consensus 202 ~g~~~p-~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~-~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d- 277 (428)
+|.++| +|++ +.+|+ .+++++++||++||+||++||+ +|..+++.|++++++|+.. +.++++|+|++|
T Consensus 3 ~G~~~P~~f~l~d~~G~-~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~-------~~~~~vv~is~d~ 74 (170)
T 3me7_A 3 LGTYVPGDITLVDSYGN-EFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTP-------GKDFWVITFTFDP 74 (170)
T ss_dssp TTCBCCTTCEEEETTCC-EEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCB-------TTTBEEEEEECCT
T ss_pred CCCcCCCCeEEEcCCcC-EEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhc-------CCceEEEEEECCC
Confidence 689999 9999 99999 9999999999999999999997 6999999999999999753 347999999998
Q ss_pred -CCHHHHHHHHhcCCc--cccc--c--CCcchhHHHHhcCc---------CccceEEEECCCCcEEeccccchhhccccc
Q 014225 278 -RDQTSFESYFGTMPW--LALP--F--GDPTIKELTKYFDV---------QGIPCLVIIGPEGKTVTKQGRNLINLYQEN 341 (428)
Q Consensus 278 -~~~~~~~~~~~~~~~--~~~~--~--~~d~~~~~~~~~~v---------~~~P~~~lid~~G~i~~~~~~~~~~~~g~~ 341 (428)
.+.+.+++|.++++. ..++ . ..+....+++.||+ ...|++||||++|+|+.... |..
T Consensus 75 ~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~-------g~~ 147 (170)
T 3me7_A 75 KDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIY-------GVN 147 (170)
T ss_dssp TCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEE-------SSS
T ss_pred CCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEe-------CCC
Confidence 367888999887762 1111 2 12456788888774 45689999999999998732 211
Q ss_pred CCCCChHHHHHHHHHHHHHHhc
Q 014225 342 AYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 342 ~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
.. .++|.+.|++++..
T Consensus 148 ---~~---~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 148 ---YN---YLEFVNALRLARGE 163 (170)
T ss_dssp ---CC---HHHHHHHHHHHTTC
T ss_pred ---CC---HHHHHHHHHHhhcc
Confidence 12 46778888777653
No 115
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.79 E-value=2.2e-19 Score=158.79 Aligned_cols=115 Identities=17% Similarity=0.226 Sum_probs=101.5
Q ss_pred ccccccccCc-cccCCC--CEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHH
Q 014225 36 SLLASKDRDY-LLNQHG--TQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFN 112 (428)
Q Consensus 36 ~~~g~~~pdf-l~~~~G--~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~ 112 (428)
..+|..+|+| |.+.+| +++++++++||+++|+||++||++|+.++|.|++++++ + +++++|++|.+.+.++
T Consensus 30 ~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~--v~vv~vs~~d~~~~~~ 103 (176)
T 3kh7_A 30 ALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----G--VVIYGINYKDDNAAAI 103 (176)
T ss_dssp TTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----T--CEEEEEEESCCHHHHH
T ss_pred cccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----C--CEEEEEeCCCCHHHHH
Confidence 3679999999 999999 89999999999999999999999999999999998876 4 9999999999999999
Q ss_pred HHHhcCCCceec-cCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 113 NYRACMPWLAVP-YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 113 ~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+|++++++.... +.+.+ ..+.+.|++.++|+++|||+ +|+++..
T Consensus 104 ~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 148 (176)
T 3kh7_A 104 KWLNELHNPYLLSISDAD--GTLGLDLGVYGAPETYLIDK---QGIIRHK 148 (176)
T ss_dssp HHHHHTTCCCSEEEEETT--CHHHHHHTCCSSCEEEEECT---TCBEEEE
T ss_pred HHHHHcCCCCceEEECCc--chHHHHcCCCCCCeEEEECC---CCeEEEE
Confidence 999988754332 22333 68999999999999999999 9998865
No 116
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.79 E-value=2.4e-19 Score=152.11 Aligned_cols=118 Identities=16% Similarity=0.291 Sum_probs=101.1
Q ss_pred ccccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC---ChHHH
Q 014225 36 SLLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE---DLNAF 111 (428)
Q Consensus 36 ~~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~---~~~~~ 111 (428)
..+|..+|+| +.+.+|+.+++++ +||+++|+||++||++|+.++|.|+++++++++.+ +.+++|++|. +.+.+
T Consensus 9 ~~~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~--~~~v~v~~d~~~~~~~~~ 85 (145)
T 3erw_A 9 EKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDS--VKLVTVNLVNSEQNQQVV 85 (145)
T ss_dssp ---CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSS--EEEEEEECGGGSSCHHHH
T ss_pred ccCCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCC--EEEEEEEccCCcCCHHHH
Confidence 3568999999 9999999999999 99999999999999999999999999999998665 9999999986 88889
Q ss_pred HHHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 112 NNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 112 ~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+++++++++....+.+.. ..+.+.|++.++|++++||+ +|+++..
T Consensus 86 ~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 130 (145)
T 3erw_A 86 EDFIKANKLTFPIVLDSK--GELMKEYHIITIPTSFLLNE---KGEIEKT 130 (145)
T ss_dssp HHHHHHTTCCSCEEECSS--SHHHHHTTCCEESEEEEECT---TCCEEEE
T ss_pred HHHHHHcCCceeEEEcCc--hhHHHhcCcCccCeEEEEcC---CCcEEEE
Confidence 999998765322222333 68999999999999999999 9998754
No 117
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.79 E-value=2.1e-19 Score=158.44 Aligned_cols=123 Identities=14% Similarity=0.126 Sum_probs=105.4
Q ss_pred HhhhhccCCCCccc--CCCCCceecccc-cCCcEEEEEE-eccCChhHH-hhhHHHHHHHHHHHhhhhhcCCCCCCEEEE
Q 014225 198 LINLLTNHDRGYLL--GHPPDEKVPVSS-LVGKTVGLYF-SARWCIPCE-KFMPKLLSIYQKIKQNLVEKGDALEDFEVV 272 (428)
Q Consensus 198 ~~~~~g~~~p~f~l--~~~g~~~v~l~~-~~gk~vll~F-~a~wC~~C~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv 272 (428)
....+|.++|+|++ +.+|+ .+++++ ++||+++|+| |++|||+|. .++|.|++++++|+++ ++++|
T Consensus 13 ~~~~vG~~aPdf~l~~~~~g~-~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~---------gv~vv 82 (173)
T 3mng_A 13 APIKVGDAIPAVEVFEGEPGN-KVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK---------GVQVV 82 (173)
T ss_dssp CCCCTTCBCCCCEEECSSTTC-EEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT---------TCCEE
T ss_pred CCCCCCCCCCCeEeeeCCCCC-EEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC---------CCEEE
Confidence 34457999999999 68899 999999 6999766655 599999999 5999999999999977 89999
Q ss_pred E-EEcCCCHHHHHHHHhcCCcc-ccccCCcchhHHHHhcCcC-------------ccceEEEECCCCcEEecccc
Q 014225 273 F-VSTDRDQTSFESYFGTMPWL-ALPFGDPTIKELTKYFDVQ-------------GIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 273 ~-is~d~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~-------------~~P~~~lid~~G~i~~~~~~ 332 (428)
+ ||.| +....++|.++.+.. .||++.|.+.++++.||+. ..|++|||| +|+|++....
T Consensus 83 ~~iS~D-~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~ 155 (173)
T 3mng_A 83 ACLSVN-DAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVE 155 (173)
T ss_dssp EEEESS-CHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEEC
T ss_pred EEEcCC-CHHHHHHHHHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEe
Confidence 7 9998 677888999888743 4999999999999999985 359999999 9999998644
No 118
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.79 E-value=1.6e-19 Score=167.92 Aligned_cols=121 Identities=13% Similarity=0.147 Sum_probs=105.3
Q ss_pred hhccCCCCccc-CCCCCc--eecccc-cCCcEEEEEEe-ccCChhHH-hhhHHHHHHHHHHHhhhhhcCCCCCCE-EEEE
Q 014225 201 LLTNHDRGYLL-GHPPDE--KVPVSS-LVGKTVGLYFS-ARWCIPCE-KFMPKLLSIYQKIKQNLVEKGDALEDF-EVVF 273 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~--~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~~~l~~l~~~~~~~~~~~~~~~~~~-~iv~ 273 (428)
.+|.++|+|++ +..+.+ .+++++ ++||++||+|| ++|||+|. .++|.|++++++|+++ ++ +|++
T Consensus 4 ~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~---------~~~~vv~ 74 (241)
T 1nm3_A 4 MEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY---------GVDDILV 74 (241)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT---------TCCEEEE
T ss_pred cCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC---------CCCEEEE
Confidence 36899999999 753332 689999 89999999999 99999999 9999999999999877 89 9999
Q ss_pred EEcCCCHHHHHHHHhcCCccccccCCcchhHHHHhcCcC-----------ccceEEEECCCCcEEecccc
Q 014225 274 VSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 274 is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~~ 332 (428)
||.| +.+..++|.++.+..+||++.|.+..+++.||+. ..|++||| ++|+|++...+
T Consensus 75 is~d-~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~ 142 (241)
T 1nm3_A 75 VSVN-DTFVMNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIE 142 (241)
T ss_dssp EESS-CHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEEC
T ss_pred EEcC-CHHHHHHHHHhcCCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEe
Confidence 9998 5778889998887555999999999999999986 45899999 99999998543
No 119
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.79 E-value=6.8e-20 Score=163.21 Aligned_cols=120 Identities=12% Similarity=0.131 Sum_probs=103.1
Q ss_pred hhccCCCCccc-CC--CC-Cceecccc-cCCcEE-EEEEeccCChhHHh-hhHHHHHHHHHHHhhhhhcCCCCCCEE-EE
Q 014225 201 LLTNHDRGYLL-GH--PP-DEKVPVSS-LVGKTV-GLYFSARWCIPCEK-FMPKLLSIYQKIKQNLVEKGDALEDFE-VV 272 (428)
Q Consensus 201 ~~g~~~p~f~l-~~--~g-~~~v~l~~-~~gk~v-ll~F~a~wC~~C~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~-iv 272 (428)
.+|.++|+|++ +. +| + .+++++ ++||++ |++||++|||+|.. ++|.|++++++|+++ ++. |+
T Consensus 27 ~vG~~aPdf~l~~~~~~G~~-~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~---------gv~~vv 96 (184)
T 3uma_A 27 AVGDKLPNATFKEKTADGPV-EVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR---------GVDDIA 96 (184)
T ss_dssp CTTCBCCCCEEEEEETTEEE-EEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT---------TCCEEE
T ss_pred CCCCCCCCcEeecccCCCce-EEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc---------CCCEEE
Confidence 46999999999 87 88 8 999999 899865 55566999999999 799999999999977 788 99
Q ss_pred EEEcCCCHHHHHHHHhcCCcc-ccccCCcchhHHHHhcCcC-----------ccceEEEECCCCcEEecccc
Q 014225 273 FVSTDRDQTSFESYFGTMPWL-ALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 273 ~is~d~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~~ 332 (428)
+||+| +....++|.++.+.. .||++.|.+..+++.||+. ..|++|||| +|+|++....
T Consensus 97 ~Is~d-~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~ 166 (184)
T 3uma_A 97 VVAVN-DLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIE 166 (184)
T ss_dssp EEESS-CHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEEC
T ss_pred EEECC-CHHHHHHHHHHhCCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEEe
Confidence 99998 667888888877743 4999999999999999985 358899996 9999998643
No 120
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.67 E-value=5e-21 Score=162.53 Aligned_cols=124 Identities=32% Similarity=0.652 Sum_probs=106.3
Q ss_pred cccCc-cccCCCCEEeccc-CCCC-EEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhc
Q 014225 41 KDRDY-LLNQHGTQVKVSD-LEGK-VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRAC 117 (428)
Q Consensus 41 ~~pdf-l~~~~G~~v~l~~-~~gk-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~ 117 (428)
.+|+| |.+.+|+++++++ ++|| +++|+||++||++|+.++|.|+++++++++.+.++.+++|++|.+.+.+++|+++
T Consensus 3 ~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~ 82 (143)
T 2lus_A 3 FIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMME 82 (143)
Confidence 57899 9999999999999 9999 9999999999999999999999999999654335999999999888889999987
Q ss_pred C--CCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccccchhhhh
Q 014225 118 M--PWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDGVELIY 168 (428)
Q Consensus 118 ~--~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~~~~~~i~ 168 (428)
+ +|..+++. .+....+++.|++.++|++++||+ +|+++..++...+.
T Consensus 83 ~~~~~~~~~~~-~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~~~~~~ 131 (143)
T 2lus_A 83 SHGDWLAIPYR-SGPASNVTAKYGITGIPALVIVKK---DGTLISMNGRGEVQ 131 (143)
Confidence 6 45555552 333368999999999999999999 99999887665543
No 121
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.79 E-value=2e-19 Score=168.25 Aligned_cols=120 Identities=15% Similarity=0.172 Sum_probs=105.9
Q ss_pred hhccCCCCccc----CCCCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 201 LLTNHDRGYLL----GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 201 ~~g~~~p~f~l----~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
.+|.++|+|++ +.+|+ .+++++++||++||+|| ++||++|..++|.|.+++++|+++ +++||+|+
T Consensus 63 ~vG~~aPdF~l~~l~d~~G~-~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~---------gv~vv~IS 132 (254)
T 3tjj_A 63 KISKPAPYWEGTAVIDGEFK-ELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI---------NTEVVACS 132 (254)
T ss_dssp CTTSBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT---------TEEEEEEE
T ss_pred CCCCCCCCcEeeeecCCCCc-EEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc---------CCEEEEEc
Confidence 47999999996 44677 99999999999999999 899999999999999999999876 89999999
Q ss_pred cCCCHHHHHHHHhcC------CccccccCCcchhHHHHhcCcC------ccceEEEECCCCcEEeccc
Q 014225 276 TDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 276 ~d~~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~ 331 (428)
+| +.....+|++.. ..+.||++.|....+++.||+. .+|++||||++|+|+++..
T Consensus 133 ~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~ 199 (254)
T 3tjj_A 133 VD-SQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITL 199 (254)
T ss_dssp SS-CHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred CC-CHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEe
Confidence 98 566777787765 1478899999889999999995 5899999999999999853
No 122
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.79 E-value=3.9e-19 Score=157.82 Aligned_cols=119 Identities=19% Similarity=0.189 Sum_probs=101.0
Q ss_pred ccccccccCc-cccC--CCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcE------EEEEEecCC
Q 014225 36 SLLASKDRDY-LLNQ--HGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDF------EVVFVSSDE 106 (428)
Q Consensus 36 ~~~g~~~pdf-l~~~--~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~------~ii~vs~D~ 106 (428)
...|..+|+| |.+. +|+++++++++||++||+||++||++|+.++|.|++++++|++++ + ++++|++|.
T Consensus 31 ~~~g~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~~~~~v~~v~v~~d~ 108 (183)
T 3lwa_A 31 EADRQQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAG--NGDTPGGTVLGINVRD 108 (183)
T ss_dssp GGGCCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC-----CCSEEEEEEECSC
T ss_pred cccCCCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcC--CCccCCcEEEEEECCC
Confidence 4568899999 9999 999999999999999999999999999999999999999999987 7 999999998
Q ss_pred -ChHHHHHHHhcCCCceeccCChHHHHHHHhhc---CCCCCceEEEEcCCCCCCCcccc
Q 014225 107 -DLNAFNNYRACMPWLAVPYSDLETKKALNRKF---DIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 107 -~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~---~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.+.+++|++++++....+.+.+ ..+.+.| ++.++|+++|||+ +|+++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 162 (183)
T 3lwa_A 109 YSRDIAQDFVTDNGLDYPSIYDPP--FMTAASLGGVPASVIPTTIVLDK---QHRPAAV 162 (183)
T ss_dssp CCHHHHHHHHHHTTCCSCEEECTT--CGGGGGTTTCCTTCCSEEEEECT---TSCEEEE
T ss_pred CCHHHHHHHHHHcCCCccEEECCc--chHHHHhccCCCCCCCeEEEECC---CCcEEEE
Confidence 78899999998764322222333 4556655 5899999999999 9999865
No 123
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.79 E-value=1.4e-19 Score=159.39 Aligned_cols=120 Identities=14% Similarity=0.150 Sum_probs=102.9
Q ss_pred hhccCCCCccc-CC----CC-----Cceeccccc-CCc-EEEEEEeccCChhHHhh-hHHHHHHHHHHHhhhhhcCCCCC
Q 014225 201 LLTNHDRGYLL-GH----PP-----DEKVPVSSL-VGK-TVGLYFSARWCIPCEKF-MPKLLSIYQKIKQNLVEKGDALE 267 (428)
Q Consensus 201 ~~g~~~p~f~l-~~----~g-----~~~v~l~~~-~gk-~vll~F~a~wC~~C~~~-~~~l~~l~~~~~~~~~~~~~~~~ 267 (428)
.+|.++|+|++ +. +| + .++++++ +|| +||++||++|||+|..+ +|.|++++++|+++
T Consensus 8 ~~g~~aP~f~l~~~~~~~~G~~~~~~-~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~--------- 77 (171)
T 2pwj_A 8 DILSAASNVSLQKARTWDEGVESKFS-TTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK--------- 77 (171)
T ss_dssp --CCCSSSBCCCSCEECCCSSCTTCC-CEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT---------
T ss_pred cccCcCCCeEEecccccccCCccCcc-eEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC---------
Confidence 46889999999 76 47 7 9999996 996 67778999999999999 99999999999877
Q ss_pred CEE-EEEEEcCCCHHHHHHHHhcCCc-cccccCCcchhHHHHhcCcCc-----------cceEEEECCCCcEEecccc
Q 014225 268 DFE-VVFVSTDRDQTSFESYFGTMPW-LALPFGDPTIKELTKYFDVQG-----------IPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 268 ~~~-iv~is~d~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~~ 332 (428)
++. |++||.| +....++|.++.+. ++||++.|.+..+++.||+.. .|++++|| +|+|++.+.+
T Consensus 78 g~~~vv~Is~d-~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~~ 153 (171)
T 2pwj_A 78 GVDSVICVAIN-DPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALNVE 153 (171)
T ss_dssp TCSEEEEEESS-CHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEEEC
T ss_pred CCCEEEEEeCC-CHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEEee
Confidence 789 9999998 56788899998886 579999999999999999853 56888898 9999998543
No 124
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.79 E-value=1.1e-18 Score=158.38 Aligned_cols=135 Identities=9% Similarity=0.065 Sum_probs=101.1
Q ss_pred hccCCCCccc-CCC-CCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC-
Q 014225 202 LTNHDRGYLL-GHP-PDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 278 (428)
Q Consensus 202 ~g~~~p~f~l-~~~-g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~- 278 (428)
....+|+|++ +.+ |+ .+++++++||+|||+|||+|||+| .++|.|++++++|+++ +++||+|++|.
T Consensus 13 ~~~~~pdF~l~d~~~G~-~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~---------g~~vlgvs~d~f 81 (207)
T 2r37_A 13 ISGTIYEYGALTIDGEE-YIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPF---------GLVILGFPCNQF 81 (207)
T ss_dssp --CCGGGCEEEBTTSSC-EEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG---------TEEEEEEECCCB
T ss_pred ccCccCCeEeeeCCCCC-EEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC---------CEEEEEEECccc
Confidence 3567899999 999 99 999999999999999999999999 7999999999999977 79999999762
Q ss_pred ------CHHHHHHHHh------cCCccccccCCcc--hh----H----HHHhc-------C--------------cCccc
Q 014225 279 ------DQTSFESYFG------TMPWLALPFGDPT--IK----E----LTKYF-------D--------------VQGIP 315 (428)
Q Consensus 279 ------~~~~~~~~~~------~~~~~~~~~~~d~--~~----~----~~~~~-------~--------------v~~~P 315 (428)
+.++.++|++ +++ ++||+..|. ++ . +.... + |...|
T Consensus 82 ~~~e~~~~~~i~~f~~~~~~~~~~~-~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ 160 (207)
T 2r37_A 82 GKQEPGENSEILPTLKYVRPGGGFV-PNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNF 160 (207)
T ss_dssp TTCCCSCHHHHHHHHHHTSSCTTCC-CSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTT
T ss_pred CcCCCCCHHHHHHHHHhcchhhccC-ccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccc
Confidence 4577888888 555 677776432 11 1 11111 1 22338
Q ss_pred eEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 316 CLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 316 ~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
++||||++|+|+.++.+. ... ++|.+.|+++++
T Consensus 161 ttflID~~G~i~~~~~g~-----------~~~---~~l~~~I~~ll~ 193 (207)
T 2r37_A 161 EKFLVGPDGIPIMRWHHR-----------TTV---SNVKMDILSYMR 193 (207)
T ss_dssp CEEEECTTSCEEEEECTT-----------SCH---HHHHHHHHHHHH
T ss_pred eEEEECCCCcEEEEECCC-----------CCH---HHHHHHHHHHHh
Confidence 999999999999985431 122 456666666664
No 125
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.79 E-value=3.9e-19 Score=152.65 Aligned_cols=119 Identities=23% Similarity=0.330 Sum_probs=101.4
Q ss_pred ccccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC-CChHHHHH
Q 014225 36 SLLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-EDLNAFNN 113 (428)
Q Consensus 36 ~~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D-~~~~~~~~ 113 (428)
+++|..+|+| |.+.+|+.+++++++||+++|+||++||++|+.++|.|+++++++++.+ +.+++|+.| .+.+.+++
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~~~~~~~~~~~ 79 (153)
T 2l5o_A 2 SLDSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKN--FQVLAVAQPIDPIESVRQ 79 (153)
T ss_dssp --CCTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTT--EEEEEEECTTSCHHHHHH
T ss_pred CCCCCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCC--eEEEEEecCCCCHHHHHH
Confidence 4679999999 9999999999999999999999999999999999999999999999876 999999976 44577889
Q ss_pred HHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 114 YRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 114 ~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
|++++++......+.. ..+.+.|++.++|++++||+ +|+++..
T Consensus 80 ~~~~~~~~~~~~~d~~--~~~~~~~~i~~~P~~~lid~---~G~i~~~ 122 (153)
T 2l5o_A 80 YVKDYGLPFTVMYDAD--KAVGQAFGTQVYPTSVLIGK---KGEILKT 122 (153)
T ss_dssp HHHHTTCCSEEEECSS--CHHHHHHTCCSSSEEEEECS---SSCCCEE
T ss_pred HHHHcCCCceEEcCch--HHHHHHcCCCccCeEEEECC---CCcEEEE
Confidence 9988775322222332 67899999999999999999 9988754
No 126
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.79 E-value=7.4e-19 Score=173.07 Aligned_cols=192 Identities=17% Similarity=0.230 Sum_probs=122.5
Q ss_pred CEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCC
Q 014225 62 KVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIE 141 (428)
Q Consensus 62 k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~ 141 (428)
++++|.|+++||++|....|.+++++++++++ +.++.|+.|.... ..+++.||+.
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~---i~f~~vd~~~~~~----------------------~~~~~~fgi~ 190 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK---ILFIFIDSDHTDN----------------------QRILEFFGLK 190 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT---CEEEEECTTSGGG----------------------HHHHHHTTCC
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc---eEEEEecCChHHH----------------------HHHHHHcCCC
Confidence 57899999999999999999999999999875 6666654442222 7889999998
Q ss_pred C--CceEEEEcCCCCCCCcccccchhhhhhcccCccccchhhHHHHHHHHHHHHHHHHHhhhhccCCCCc----cc-CCC
Q 014225 142 G--IPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGY----LL-GHP 214 (428)
Q Consensus 142 ~--~P~~~lid~~~~dG~i~~~~~~~~i~~~g~~~~p~t~~~~~~l~~~~~~~~~~~~~~~~~g~~~p~f----~l-~~~ 214 (428)
+ +|++++++. ++.... |.......+.+.+..+..... ....-......+.|.- .+ ..+
T Consensus 191 ~~~~P~~~~~~~---~~~~~k---------y~~~~~~~~~~~l~~fi~~~l---~g~~~~~~~s~~~p~~~~~~~v~~l~ 255 (361)
T 3uem_A 191 KEECPAVRLITL---EEEMTK---------YKPESEELTAERITEFCHRFL---EGKIKPHLMSQELPEDWDKQPVKVLV 255 (361)
T ss_dssp TTTCSEEEEEEC---C--CCE---------ECCSSCCCCHHHHHHHHHHHH---TTCSCCCCBCCCCCTTTTTSSSEEEC
T ss_pred ccCCccEEEEEc---CCcccc---------cCCCccccCHHHHHHHHHHHh---cCCCcccccCCCCCcccccCCcEEee
Confidence 7 999999995 332211 111111233333333222111 0000000011122211 12 333
Q ss_pred CCceecccc-cCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCcc
Q 014225 215 PDEKVPVSS-LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWL 293 (428)
Q Consensus 215 g~~~v~l~~-~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~ 293 (428)
+. .+.-.. -.+++++|+|||+||++|+++.|.|.++++.+++. .++.++.|..+.+
T Consensus 256 ~~-~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~--------~~v~~~~vd~~~~-------------- 312 (361)
T 3uem_A 256 GK-NFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH--------ENIVIAKMDSTAN-------------- 312 (361)
T ss_dssp TT-THHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTC--------SSEEEEEEETTTC--------------
T ss_pred cC-chhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccC--------CcEEEEEEECCcc--------------
Confidence 33 332222 25799999999999999999999999999998754 2577777766543
Q ss_pred ccccCCcchhHHHHhcCcCccceEEEECCC-CcEE
Q 014225 294 ALPFGDPTIKELTKYFDVQGIPCLVIIGPE-GKTV 327 (428)
Q Consensus 294 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~-G~i~ 327 (428)
. ++.|+|.++||+++++++ |+..
T Consensus 313 ---------~--~~~~~v~~~Pt~~~~~~~~~~~~ 336 (361)
T 3uem_A 313 ---------E--VEAVKVHSFPTLKFFPASADRTV 336 (361)
T ss_dssp ---------B--CSSCCCCSSSEEEEECSSSSCCC
T ss_pred ---------c--hhhcCCcccCeEEEEECCCCcce
Confidence 1 567899999999999655 4433
No 127
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.79 E-value=2e-19 Score=156.82 Aligned_cols=114 Identities=19% Similarity=0.386 Sum_probs=101.9
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC----------
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD---------- 105 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D---------- 105 (428)
.+|..+|+| +.+.+|+++++++++||+++|+||++||++|+.++|.|++++++++ + +.+++|++|
T Consensus 12 ~~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~--v~vv~i~~d~~~~~~~~~~ 87 (165)
T 3ha9_A 12 EVLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--E--ISVIAIDFWTAEALKALGL 87 (165)
T ss_dssp HHHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--T--EEEEEEECCSHHHHHHHTC
T ss_pred cccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--C--cEEEEEEeccccccccccc
Confidence 568999999 9999999999999999999999999999999999999999999998 4 999999999
Q ss_pred --------CChHHHHHHHhcCCCceec-cCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCccc
Q 014225 106 --------EDLNAFNNYRACMPWLAVP-YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATL 160 (428)
Q Consensus 106 --------~~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~ 160 (428)
.+.+.+++|++++++..++ +.+ + ..+.+.|++.++|+++|||+ +|+++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~--~~~~~~~~v~~~P~~~lid~---~G~i~~ 145 (165)
T 3ha9_A 88 NKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-D--GSLVEKFNVRSIDYIVIMDK---SSNVLY 145 (165)
T ss_dssp CSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-C--SHHHHHTTCCSSSEEEEEET---TCCEEE
T ss_pred ccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-h--HHHHHHhCCCCceEEEEEcC---CCcEEE
Confidence 7889999999987652222 223 2 78999999999999999999 999986
No 128
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.78 E-value=4.5e-19 Score=153.61 Aligned_cols=115 Identities=15% Similarity=0.254 Sum_probs=99.1
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYR 115 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~ 115 (428)
..|..+|+| +.+.+|+.+++++++||+++|+||++||++|+.++|.|+++++++++.+ +.+++|+.|.. +++++
T Consensus 16 ~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~--~~~v~v~~d~~---~~~~~ 90 (158)
T 3hdc_A 16 RTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGD--LVVLAVNVEKR---FPEKY 90 (158)
T ss_dssp CTTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTS--EEEEEEECSSS---CCGGG
T ss_pred CCCCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCC--eEEEEEeCCHH---HHHHH
Confidence 469999999 9999999999999999999999999999999999999999999998765 99999999873 56677
Q ss_pred hcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 116 ACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 116 ~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+++++....+.+.+ ..+.+.|++.++|+++|||+ +|+++..
T Consensus 91 ~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 131 (158)
T 3hdc_A 91 RRAPVSFNFLSDAT--GQVQQRYGANRLPDTFIVDR---KGIIRQR 131 (158)
T ss_dssp GGCCCSCEEEECTT--SHHHHHTTCCSSSEEEEECT---TSBEEEE
T ss_pred HHcCCCceEEECch--HHHHHHhCCCCcceEEEEcC---CCCEEEE
Confidence 76664322222333 68999999999999999999 9998865
No 129
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.78 E-value=4.7e-19 Score=154.91 Aligned_cols=116 Identities=20% Similarity=0.185 Sum_probs=101.4
Q ss_pred hhccCCCCccc-CC--CCCceeccccc-CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEc
Q 014225 201 LLTNHDRGYLL-GH--PPDEKVPVSSL-VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 276 (428)
Q Consensus 201 ~~g~~~p~f~l-~~--~g~~~v~l~~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~ 276 (428)
.+|.++|+|++ +. +|+ .+.++++ +||++||+||++||++|+.+.|.|++++++ ++.+++|++
T Consensus 23 ~~G~~~P~f~l~~~~~~g~-~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-------------~v~vv~v~~ 88 (168)
T 2b1k_A 23 LIGKPVPKFRLESLDNPGQ-FYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-------------GIRVVGMNY 88 (168)
T ss_dssp TTTSBCCCCEEEESSSTTC-EEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-------------TCCEEEEEE
T ss_pred ccCCcCCCeEeecccCCCc-EeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-------------CCEEEEEEC
Confidence 47999999999 88 898 9999885 899999999999999999999999888764 378999999
Q ss_pred CCCHHHHHHHHhcCCccccc-cCCcchhHHHHhcCcCccceEEEECCCCcEEeccc
Q 014225 277 DRDQTSFESYFGTMPWLALP-FGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 277 d~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
|.+.+.+++|+..++ +.++ +..|....+++.|++.++|+++|||++|+++.+..
T Consensus 89 ~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 143 (168)
T 2b1k_A 89 KDDRQKAISWLKELG-NPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA 143 (168)
T ss_dssp SCCHHHHHHHHHHHC-CCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEE
T ss_pred CCChHHHHHHHHHcC-CCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEe
Confidence 989999999998776 4455 34567788999999999999999999999998753
No 130
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.78 E-value=6.3e-19 Score=155.00 Aligned_cols=121 Identities=23% Similarity=0.283 Sum_probs=101.9
Q ss_pred cccccc-Cc-cccCCCCEEecccCCCCEEEEEEecCCCh-hhhhhHHHHHHHHHHHhcCCCcEEEEEEecC--CChHHHH
Q 014225 38 LASKDR-DY-LLNQHGTQVKVSDLEGKVTALYFSANWYP-PCGNFTGVLVDVYEELRNNGSDFEVVFVSSD--EDLNAFN 112 (428)
Q Consensus 38 ~g~~~p-df-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D--~~~~~~~ 112 (428)
+|..+| +| |.+.+|+++++++++||+++|+||++||+ +|..++|.|+++++++++.+.++++|+|++| ++.+.++
T Consensus 3 ~G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~ 82 (170)
T 3me7_A 3 LGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIK 82 (170)
T ss_dssp TTCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHH
T ss_pred CCCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHH
Confidence 688999 99 99999999999999999999999999998 6999999999999999865556999999998 4667889
Q ss_pred HHHhcCC-----CceeccCChHHHHHHHhhcCC---------CCCceEEEEcCCCCCCCcccc
Q 014225 113 NYRACMP-----WLAVPYSDLETKKALNRKFDI---------EGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 113 ~~~~~~~-----~~~~~~~d~~~~~~l~~~~~v---------~~~P~~~lid~~~~dG~i~~~ 161 (428)
+|.++++ |..+...+.+....+++.||+ ...|+++|||+ +|+++..
T Consensus 83 ~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~---~G~i~~~ 142 (170)
T 3me7_A 83 RFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSP---ELQIKDY 142 (170)
T ss_dssp HHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECT---TSBEEEE
T ss_pred HHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECC---CCeEEEE
Confidence 9998876 322222354555889988774 56789999999 9999855
No 131
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.78 E-value=2e-19 Score=159.58 Aligned_cols=121 Identities=17% Similarity=0.135 Sum_probs=100.1
Q ss_pred cccccccccccCc-cccCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHH
Q 014225 33 RFSSLLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNA 110 (428)
Q Consensus 33 ~~~~~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~ 110 (428)
+....+|..+|+| |.+.+|++++|++++||+++|+|| ++||++|+.++|.|++++++|++.+ ++|++|+.|. .+.
T Consensus 22 ~~Gd~ig~~aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~--~~vv~Vs~D~-~~~ 98 (179)
T 3ixr_A 22 NIGDTLNHSLLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQIN--ATVLGVSRDS-VKS 98 (179)
T ss_dssp CTTCBCCHHHHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTT--EEEEEEESCC-HHH
T ss_pred CcCcccCCcCCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEcCCC-HHH
Confidence 3444455559999 999999999999999999999998 9999999999999999999999887 9999999985 556
Q ss_pred HHHHHhcCCCceeccCChHHHHHHHhhcCCCC------------CceEEEEcCCCCCCCcccc
Q 014225 111 FNNYRACMPWLAVPYSDLETKKALNRKFDIEG------------IPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 111 ~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~------------~P~~~lid~~~~dG~i~~~ 161 (428)
.++|+++++..+..+.|.+ ..+++.|++.. +|+++|||+ +|+|+..
T Consensus 99 ~~~~~~~~~~~f~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~---~G~I~~~ 156 (179)
T 3ixr_A 99 HDSFCAKQGFTFPLVSDSD--AILCKAFDVIKEKTMYGRQVIGIERSTFLIGP---THRIVEA 156 (179)
T ss_dssp HHHHHHHHTCCSCEEECTT--CHHHHHTTCEEEECCC--CEEEECCEEEEECT---TSBEEEE
T ss_pred HHHHHHHcCCceEEEECCc--hHHHHHcCCcccccccCcccCCcceEEEEECC---CCEEEEE
Confidence 8888887654222222433 68899999853 699999999 9999865
No 132
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.78 E-value=4.6e-20 Score=161.36 Aligned_cols=117 Identities=19% Similarity=0.288 Sum_probs=100.3
Q ss_pred ccccccCc-cccCCCCEEecccC--CCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHH
Q 014225 38 LASKDRDY-LLNQHGTQVKVSDL--EGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNN 113 (428)
Q Consensus 38 ~g~~~pdf-l~~~~G~~v~l~~~--~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~ 113 (428)
+|+.+||| |.+.+|++++|+++ +||+++|+|| ++||++|+.++|.|++++++|++.| +++++||.|. .+..++
T Consensus 7 vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~--v~vv~is~d~-~~~~~~ 83 (164)
T 4gqc_A 7 LGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKAN--AEVLAISVDS-PWCLKK 83 (164)
T ss_dssp TTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSS--SEEEEEESSC-HHHHHH
T ss_pred CCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccC--ceEEEecCCC-HHHHHH
Confidence 69999999 99999999999998 8999888888 9999999999999999999999987 9999999874 566888
Q ss_pred HHhcCCCceeccCChHHHHHHHhhcCCC----------CCceEEEEcCCCCCCCccccc
Q 014225 114 YRACMPWLAVPYSDLETKKALNRKFDIE----------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 114 ~~~~~~~~~~~~~d~~~~~~l~~~~~v~----------~~P~~~lid~~~~dG~i~~~~ 162 (428)
|.+++++.+.-.+|.+ ..+++.||+. ..|+++|||+ +|+|++..
T Consensus 84 ~~~~~~~~fp~l~D~~--~~v~~~ygv~~~~~~~~~~~~~p~tflID~---~G~I~~~~ 137 (164)
T 4gqc_A 84 FKDENRLAFNLLSDYN--REVIKLYNVYHEDLKGLKMVAKRAVFIVKP---DGTVAYKW 137 (164)
T ss_dssp HHHHTTCCSEEEECTT--SHHHHHTTCEEEEETTEEEEECCEEEEECT---TSBEEEEE
T ss_pred HHHhcCcccceeecCc--hHHHHHcCCcccccccCcCCeeeEEEEECC---CCEEEEEE
Confidence 8887765322233554 7899999983 4789999999 99998764
No 133
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.78 E-value=1.1e-19 Score=162.37 Aligned_cols=119 Identities=12% Similarity=0.146 Sum_probs=94.7
Q ss_pred ccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC-------CChH
Q 014225 38 LASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-------EDLN 109 (428)
Q Consensus 38 ~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D-------~~~~ 109 (428)
.+..+||| |.+.+|+++++++++||+|||+||++||++|+.++|.|++++++|++++ +++|+|++| .+.+
T Consensus 22 ~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~--~~vi~is~d~~~~~e~~~~~ 99 (187)
T 3dwv_A 22 AASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQG--FTVLAFPSNQFGGQEPGNEE 99 (187)
T ss_dssp TCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGT--CEEEEEEBCCCSSCSSSBTT
T ss_pred CCCccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCC--eEEEEEECcccCCCCCCCHH
Confidence 36789999 9999999999999999999999999999999999999999999999987 999999998 4567
Q ss_pred HHHHHHhc-CCC--ceeccCChH--HHHHHH--------hhcCCCCCc---eEEEEcCCCCCCCcccc
Q 014225 110 AFNNYRAC-MPW--LAVPYSDLE--TKKALN--------RKFDIEGIP---CLVVLQPYDDKDDATLH 161 (428)
Q Consensus 110 ~~~~~~~~-~~~--~~~~~~d~~--~~~~l~--------~~~~v~~~P---~~~lid~~~~dG~i~~~ 161 (428)
.+++|+++ ++. ..+...+.. ....+. ..+++..+| +++|||+ +|+++..
T Consensus 100 ~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~---~G~i~~~ 164 (187)
T 3dwv_A 100 EIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDR---DGVPVER 164 (187)
T ss_dssp HHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECT---TSCEEEE
T ss_pred HHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECC---CCCEEEE
Confidence 88888883 343 222100111 001111 455777888 9999999 9999866
No 134
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.78 E-value=5.2e-19 Score=157.40 Aligned_cols=118 Identities=21% Similarity=0.316 Sum_probs=101.0
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCC-hHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDED-LNAFNNY 114 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~-~~~~~~~ 114 (428)
..|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|+++++++++.+ +++++|++|.+ .+.++++
T Consensus 35 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~d~~~~~~~~~~ 112 (186)
T 1jfu_A 35 SAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPN--FEVVAINIDTRDPEKPKTF 112 (186)
T ss_dssp CSCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTT--EEEEEEECCCSCTTHHHHH
T ss_pred cCCCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCC--cEEEEEECCCCCHHHHHHH
Confidence 468899999 9999999999999999999999999999999999999999999998765 99999999875 4678888
Q ss_pred HhcCCCceecc-CChHHHHHHHhhcCCC----CCceEEEEcCCCCCCCcccc
Q 014225 115 RACMPWLAVPY-SDLETKKALNRKFDIE----GIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 115 ~~~~~~~~~~~-~d~~~~~~l~~~~~v~----~~P~~~lid~~~~dG~i~~~ 161 (428)
++++++..+++ .|.+ ..+.+.|++. ++|+++|||+ +|+++..
T Consensus 113 ~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~P~~~lid~---~G~i~~~ 159 (186)
T 1jfu_A 113 LKEANLTRLGYFNDQK--AKVFQDLKAIGRALGMPTSVLVDP---QGCEIAT 159 (186)
T ss_dssp HHHTTCCTTCCEECTT--CHHHHHHHTTTCCSSSSEEEEECT---TSBEEEE
T ss_pred HHHcCCCCCceEECCc--chHHHHhccccccCCCCEEEEECC---CCCEEEE
Confidence 88877532332 2333 6778888875 8999999999 9999865
No 135
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.78 E-value=6.5e-19 Score=156.22 Aligned_cols=120 Identities=12% Similarity=0.082 Sum_probs=95.1
Q ss_pred cccccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC-------
Q 014225 35 SSLLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE------- 106 (428)
Q Consensus 35 ~~~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~------- 106 (428)
.+..|..+|+| |.+.+|+++++++++||+|||+||++||++|+.++|.|++++++|++++ ++|++|++|.
T Consensus 11 ~~~~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~--~~vi~is~d~~~~~~~d 88 (180)
T 3kij_A 11 LKPKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSH--FSVLAFPCNQFGESEPR 88 (180)
T ss_dssp CCCCCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTS--EEEEEEECCCSTTCCCS
T ss_pred hcCCcCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCC--eEEEEEECCccccCCCC
Confidence 34568899999 9999999999999999999999999999999999999999999999887 9999999875
Q ss_pred ChHHHHHHHhc-CCCceeccC-----ChH---HHHHHHhhcCCCCCce----EEEEcCCCCCCCcccc
Q 014225 107 DLNAFNNYRAC-MPWLAVPYS-----DLE---TKKALNRKFDIEGIPC----LVVLQPYDDKDDATLH 161 (428)
Q Consensus 107 ~~~~~~~~~~~-~~~~~~~~~-----d~~---~~~~l~~~~~v~~~P~----~~lid~~~~dG~i~~~ 161 (428)
+.+.+++|+++ +++.+..+. +.. ....+.. ...++|+ ++|||+ +|+++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--~~~~~p~~~~~~~lid~---~G~i~~~ 151 (180)
T 3kij_A 89 PSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVD--SSKKEPRWNFWKYLVNP---EGQVVKF 151 (180)
T ss_dssp CHHHHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHH--HHTCCCSSTTCEEEECT---TSCEEEE
T ss_pred CHHHHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHh--cCCCCccccceEEEECC---CCCEEEE
Confidence 77888999987 653211111 111 0011111 1346888 999999 9999866
No 136
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.78 E-value=1.2e-18 Score=188.61 Aligned_cols=205 Identities=11% Similarity=0.086 Sum_probs=135.0
Q ss_pred CCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCC
Q 014225 61 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 140 (428)
Q Consensus 61 gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 140 (428)
+++++|.||++||++|+...|.+.++++++++. +.++.|+.+.. ..+++.|++
T Consensus 563 ~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~---v~~~~vd~~~~------------------------~~l~~~~~v 615 (780)
T 3apo_A 563 DEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL---INVGSVDCGQY------------------------HSFCTQENV 615 (780)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEETTTT------------------------HHHHHHTTC
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC---eEEEEEECcch------------------------HHHHHHcCC
Confidence 568999999999999999999999999999864 66666544322 678889999
Q ss_pred CCCceEEEEcCCCCCCCcccccchhhhhhcccCccccchhhHHHHHHHHHHHHHHHHHhhhhccCCCCcccCCCCCceec
Q 014225 141 EGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGHPPDEKVP 220 (428)
Q Consensus 141 ~~~P~~~lid~~~~dG~i~~~~~~~~i~~~g~~~~p~t~~~~~~l~~~~~~~~~~~~~~~~~g~~~p~f~l~~~g~~~v~ 220 (428)
.++|+++++.. ++... .... .| .....+.. .+.. .+....+......++. .+.
T Consensus 616 ~~~Pti~~~~~---~~~~~-~~~~----~y--~g~~~~~~---~l~~-------------fi~~~~~~~v~~l~~~-~~~ 668 (780)
T 3apo_A 616 QRYPEIRFYPQ---KSSKA-YQYH----SY--NGWNRDAY---SLRS-------------WGLGFLPQASIDLTPQ-TFN 668 (780)
T ss_dssp CSSSEEEEECC---CSSSC-CSCE----EC--CCSCCSHH---HHHH-------------HHHTTSCCCSEEECHH-HHH
T ss_pred CCCCeEEEEcC---CCcCc-cchh----hc--CCCCCCHH---HHHH-------------HHhhhcccccccCCHH-HHH
Confidence 99999999986 33210 0000 00 00011111 1111 1111112211122333 331
Q ss_pred -ccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCC
Q 014225 221 -VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGD 299 (428)
Q Consensus 221 -l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~ 299 (428)
.-.-.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|+++..
T Consensus 669 ~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~----------~~~~~vd~~~~-------------------- 718 (780)
T 3apo_A 669 EKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGK----------VRAGKVDCQAY-------------------- 718 (780)
T ss_dssp HHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------CEEEEEETTTC--------------------
T ss_pred HHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC----------ceEEEEECCCC--------------------
Confidence 11124689999999999999999999999999998654 88999988755
Q ss_pred cchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhc
Q 014225 300 PTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 300 d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
..+++.|+|.++|+++++ ++|+++.+..+.. +| ..+ .++|.+.|+++++.
T Consensus 719 ---~~~~~~~~v~~~Pt~~~~-~~g~~~~~~~G~~---~g----~~~---~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 719 ---PQTCQKAGIKAYPSVKLY-QYERAKKSIWEEQ---IN----SRD---AKTIAALIYGKLET 768 (780)
T ss_dssp ---HHHHHHTTCCSSSEEEEE-EEETTTTEEEEEE---EC----CCC---HHHHHHHHHHHTTC
T ss_pred ---HHHHHhcCCCcCCEEEEE-cCCCccccccCcc---cC----CcC---HHHHHHHHHHHHHH
Confidence 578999999999999999 8887664422210 01 122 35566777766643
No 137
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.78 E-value=1.9e-18 Score=150.19 Aligned_cols=117 Identities=18% Similarity=0.286 Sum_probs=99.8
Q ss_pred cccCc-cccCCCCEEecccCCCCEEEEEEecCCChh-hhhhHHHHHHHHHHHhcC--CCcEEEEEEecCC---ChHHHHH
Q 014225 41 KDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPP-CGNFTGVLVDVYEELRNN--GSDFEVVFVSSDE---DLNAFNN 113 (428)
Q Consensus 41 ~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~-C~~~~p~l~~l~~~~~~~--~~~~~ii~vs~D~---~~~~~~~ 113 (428)
.+|+| |.+.+|+++++++++||+++|+||++||++ |+.++|.|+++++++++. ..++++++|++|. +.+.+++
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~ 81 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIAN 81 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHH
Confidence 47999 999999999999999999999999999998 999999999999999872 0139999999986 3677899
Q ss_pred HHhcCC--CceeccCChHHHHHHHhhcCCCCCc---------------eEEEEcCCCCCCCcccc
Q 014225 114 YRACMP--WLAVPYSDLETKKALNRKFDIEGIP---------------CLVVLQPYDDKDDATLH 161 (428)
Q Consensus 114 ~~~~~~--~~~~~~~d~~~~~~l~~~~~v~~~P---------------~~~lid~~~~dG~i~~~ 161 (428)
|+++++ |..+.. +.+....+.+.|++..+| +++|||+ +|+++..
T Consensus 82 ~~~~~~~~~~~l~~-~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~---~G~i~~~ 142 (164)
T 2ggt_A 82 YVKEFSPKLVGLTG-TREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGP---DGEFLDY 142 (164)
T ss_dssp HHHTTCSSCEEEEC-CHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECT---TSCEEEE
T ss_pred HHHHcCCCeEEEeC-CHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECC---CCeEEEE
Confidence 998765 433332 445557899999999999 8999999 9999865
No 138
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.78 E-value=4.3e-19 Score=154.46 Aligned_cols=118 Identities=21% Similarity=0.236 Sum_probs=101.7
Q ss_pred cccccccCc---cccCCCCEEecccCCCCEEEEEEec-CCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHH
Q 014225 37 LLASKDRDY---LLNQHGTQVKVSDLEGKVTALYFSA-NWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFN 112 (428)
Q Consensus 37 ~~g~~~pdf---l~~~~G~~v~l~~~~gk~vlv~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~ 112 (428)
.+|..+|+| |.+.+|+++++++++||+++|+||+ +||++|+.++|.|++++++|++.| +++++|+.| +.+.++
T Consensus 8 ~~G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~--~~vv~vs~d-~~~~~~ 84 (163)
T 3gkn_A 8 VLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAG--AKILGVSRD-SVKSHD 84 (163)
T ss_dssp CCCCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTT--CEEEEEESS-CHHHHH
T ss_pred ccCCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCC--CEEEEEeCC-CHHHHH
Confidence 469999999 6799999999999999999999998 999999999999999999999987 999999998 677788
Q ss_pred HHHhcCCCceeccCChHHHHHHHhhcCCCC------------CceEEEEcCCCCCCCccccc
Q 014225 113 NYRACMPWLAVPYSDLETKKALNRKFDIEG------------IPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 113 ~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~------------~P~~~lid~~~~dG~i~~~~ 162 (428)
+|.+++++....+.|.+ ..+.+.|++.. +|+++|||+ +|+|+...
T Consensus 85 ~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~---~G~i~~~~ 141 (163)
T 3gkn_A 85 NFCAKQGFAFPLVSDGD--EALCRAFDVIKEKNMYGKQVLGIERSTFLLSP---EGQVVQAW 141 (163)
T ss_dssp HHHHHHCCSSCEEECTT--CHHHHHTTCEEEEEETTEEEEEECCEEEEECT---TSCEEEEE
T ss_pred HHHHHhCCCceEEECCc--HHHHHHhCCccccccccccccCcceEEEEECC---CCeEEEEE
Confidence 99887664322223433 68899999977 999999999 99998653
No 139
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.78 E-value=5.3e-19 Score=155.29 Aligned_cols=122 Identities=16% Similarity=0.216 Sum_probs=98.8
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCCh-hhhhhHHHHHHHHHHHhcCCCcEEEEEEecC---CChHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYP-PCGNFTGVLVDVYEELRNNGSDFEVVFVSSD---EDLNAF 111 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D---~~~~~~ 111 (428)
.+|..+|+| |.+.+|+++++++++||+++|+||++||+ +|+.++|.|.++++++++.+.++++|+|++| .+.+.+
T Consensus 8 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~ 87 (174)
T 1xzo_A 8 PLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQL 87 (174)
T ss_dssp CCCEECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHH
T ss_pred ccccccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHH
Confidence 468999999 99999999999999999999999999999 9999999999999999987556999999998 467888
Q ss_pred HHHHhcCCCce---eccCC--hHHHHHHHh------------hcCCCCCceEEEEcCCCCCCCcccc
Q 014225 112 NNYRACMPWLA---VPYSD--LETKKALNR------------KFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 112 ~~~~~~~~~~~---~~~~d--~~~~~~l~~------------~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++|+++++... ....+ ......+.. .|++..+|+++|||+ +|+++..
T Consensus 88 ~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~---~G~i~~~ 151 (174)
T 1xzo_A 88 KKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGP---DGKVLKD 151 (174)
T ss_dssp HHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECT---TSEEEEE
T ss_pred HHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECC---CCeEEEE
Confidence 99999877432 11123 221122221 145788999999999 9999865
No 140
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.78 E-value=6e-19 Score=157.36 Aligned_cols=117 Identities=16% Similarity=0.199 Sum_probs=101.2
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC-------CCh
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-------EDL 108 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D-------~~~ 108 (428)
.+|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|++++++|+++ +++++|+.| .+.
T Consensus 8 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---~~~v~v~~d~~~~~~~d~~ 84 (188)
T 2cvb_A 8 PLESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK---VAFVGINANDYEKYPEDAP 84 (188)
T ss_dssp CTTCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT---EEEEEEECCCTTTCGGGSH
T ss_pred CCCCCCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC---eEEEEEEcCccccccccCH
Confidence 368899999 999999999999999999999999999999999999999999999864 999999986 466
Q ss_pred HHHHHHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 109 NAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.+++|++++++....+.|.+ ..+.+.|++.++|+++|||+ +|+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 132 (188)
T 2cvb_A 85 EKMAAFAEEHGIFFPYLLDET--QEVAKAYRALRTPEVFLFDE---RRLLRYH 132 (188)
T ss_dssp HHHHHHHHHHTCCSCEEECSS--SHHHHHTTCCEESEEEEECT---TCBEEEE
T ss_pred HHHHHHHHHhCCCceEEECCc--chHHHHcCCCCCCeEEEECC---CCcEEEE
Confidence 788999987664222222333 68899999999999999999 9999876
No 141
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.78 E-value=6.4e-19 Score=162.64 Aligned_cols=140 Identities=11% Similarity=0.116 Sum_probs=113.3
Q ss_pred hhccCCCCccc-CCCCCceecccccCCc-EEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGK-TVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
.+|.++|+|++ +.+| .+++++++|+ ++||+|| ++|||+|..+++.|.+++++|+++ +++||+||+|
T Consensus 4 ~iG~~aPdF~l~~~~G--~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~---------~v~vigIS~D 72 (233)
T 2v2g_A 4 TLGEVFPNFEADSTIG--KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR---------GVKLIALSCD 72 (233)
T ss_dssp CTTCBCCCCEEEETTC--CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT---------TEEEEEEESS
T ss_pred CCCCCCCCcEEecCCC--CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc---------CCEEEEEcCC
Confidence 36999999999 8888 6999999997 9999998 899999999999999999999877 8999999999
Q ss_pred CCHHHHHHHHh------cCC-ccccccCCcchhHHHHhcCcC------------ccceEEEECCCCcEEeccccchhhcc
Q 014225 278 RDQTSFESYFG------TMP-WLALPFGDPTIKELTKYFDVQ------------GIPCLVIIGPEGKTVTKQGRNLINLY 338 (428)
Q Consensus 278 ~~~~~~~~~~~------~~~-~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~~~~~~~~ 338 (428)
. ....++|.+ ..+ .++||+..|....+++.||+. .+|++||||++|+|+....+.+
T Consensus 73 ~-~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~---- 147 (233)
T 2v2g_A 73 N-VADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPA---- 147 (233)
T ss_dssp C-HHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECT----
T ss_pred C-HHHHHHHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCC----
Confidence 4 555566665 341 478899989889999999985 5799999999999999853321
Q ss_pred cccCCCCChHHHHHHHHHHHHHHh
Q 014225 339 QENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 339 g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
. .....++|.+.|+.+..
T Consensus 148 ---~---~gr~~~eilr~l~~Lq~ 165 (233)
T 2v2g_A 148 ---T---TGRNFSEILRVIDSLQL 165 (233)
T ss_dssp ---T---BCCCHHHHHHHHHHHHH
T ss_pred ---C---CCCCHHHHHHHHHHHHh
Confidence 1 11235667777766543
No 142
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.78 E-value=3.4e-19 Score=162.30 Aligned_cols=136 Identities=8% Similarity=0.056 Sum_probs=110.6
Q ss_pred hccCCCCccc-CCCCCceecccccCCcEEEEEEeccC-ChhHH-----hhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 014225 202 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARW-CIPCE-----KFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 274 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~w-C~~C~-----~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~i 274 (428)
+|.++|+|++ +.+|+ .+++++++||++||+||+.| ||+|. .+++.|.++ | . ++.||+|
T Consensus 24 vG~~APdFtL~d~~G~-~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~---------gv~VvgI 88 (224)
T 3keb_A 24 KGDYLPSFMLVDDQKH-DAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--P---------HLKLIVI 88 (224)
T ss_dssp TTCBCCCCEEEETTSC-EEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--T---------TSEEEEE
T ss_pred CCCCCCCeEEECCCCC-EEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--C---------CCEEEEE
Confidence 5999999999 99999 99999999999999999987 99999 888888776 4 3 6899999
Q ss_pred EcCCCHHHHHHHHhcCCccccccCCcc-hhHHHHhcCcCc---------cceEEEECCCCcEEeccccchhhcccccCCC
Q 014225 275 STDRDQTSFESYFGTMPWLALPFGDPT-IKELTKYFDVQG---------IPCLVIIGPEGKTVTKQGRNLINLYQENAYP 344 (428)
Q Consensus 275 s~d~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~v~~---------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p 344 (428)
|+| +....++|..+.+..+||++.|. +..+++.||+.. .|++||||++|+|++.+.... +
T Consensus 89 S~D-s~~~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~---------~ 158 (224)
T 3keb_A 89 TVD-SPSSLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLAN---------T 158 (224)
T ss_dssp ESS-CHHHHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSB---------T
T ss_pred ECC-CHHHHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCC---------C
Confidence 998 67788889888774479999997 699999999964 799999999999999864332 1
Q ss_pred CChHHHHHHHHHHHHHHh
Q 014225 345 FTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 345 ~~~~~~~~L~~~l~~~~~ 362 (428)
......+++.+.|+++..
T Consensus 159 ~~~pd~~evl~~L~~l~~ 176 (224)
T 3keb_A 159 RDFFDFDAIEKLLQEGEQ 176 (224)
T ss_dssp TCCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhhh
Confidence 222234555555655543
No 143
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.78 E-value=1.3e-18 Score=149.47 Aligned_cols=114 Identities=16% Similarity=0.266 Sum_probs=92.5
Q ss_pred cccCccccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCC
Q 014225 41 KDRDYLLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPW 120 (428)
Q Consensus 41 ~~pdfl~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~ 120 (428)
.+|+|....+|+++++++++||+++|+||++||++|+.++|.|+++++++++.+ +++++|++|. .+.+++|++++++
T Consensus 4 pa~~~~~~~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~--v~vv~v~~d~-~~~~~~~~~~~~~ 80 (151)
T 3raz_A 4 SADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGS--VDMVGIALDT-SDNIGNFLKQTPV 80 (151)
T ss_dssp ---CEEETTTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTT--EEEEEEESSC-HHHHHHHHHHSCC
T ss_pred CcchhhcccCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCC--eEEEEEECCC-hHHHHHHHHHcCC
Confidence 455552238999999999999999999999999999999999999999997766 9999999975 5668999987664
Q ss_pred --ceeccCChHHHHHHHhhcC--CCCCceEEEEcCCCCCCCcccc
Q 014225 121 --LAVPYSDLETKKALNRKFD--IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 121 --~~~~~~d~~~~~~l~~~~~--v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..+..... ....+.+.|+ +.++|+++|||+ +|+++..
T Consensus 81 ~~~~~~~~~~-~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 121 (151)
T 3raz_A 81 SYPIWRYTGA-NSRNFMKTYGNTVGVLPFTVVEAP---KCGYRQT 121 (151)
T ss_dssp SSCEEEECCS-CHHHHHHTTTCCSCCSSEEEEEET---TTTEEEE
T ss_pred CCceEecCcc-chHHHHHHhCCccCCCCEEEEECC---CCcEEEE
Confidence 33322222 2378999999 999999999999 9998765
No 144
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.77 E-value=1.7e-18 Score=178.13 Aligned_cols=66 Identities=21% Similarity=0.388 Sum_probs=58.2
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++++|.|||+||++|+.+.|.+.++++++++.+ +.++.|+.+.. ..+++.|+
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~--v~~~~vd~~~~------------------------~~l~~~~~ 83 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKN--ITLAQIDCTEN------------------------QDLCMEHN 83 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTT--CEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCC--eEEEEEECCCC------------------------HHHHHhcC
Confidence 57899999999999999999999999999998754 78888766544 67999999
Q ss_pred CCCCceEEEEcC
Q 014225 140 IEGIPCLVVLQP 151 (428)
Q Consensus 140 v~~~P~~~lid~ 151 (428)
|.++|+++++..
T Consensus 84 v~~~Pt~~~~~~ 95 (504)
T 2b5e_A 84 IPGFPSLKIFKN 95 (504)
T ss_dssp CCSSSEEEEEET
T ss_pred CCcCCEEEEEeC
Confidence 999999999984
No 145
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.77 E-value=1.8e-18 Score=152.19 Aligned_cols=125 Identities=16% Similarity=0.219 Sum_probs=99.1
Q ss_pred ccccccccccCc-cccCCCCEEecccCCCCEEEEEEecCCCh-hhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC---Ch
Q 014225 34 FSSLLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYP-PCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE---DL 108 (428)
Q Consensus 34 ~~~~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~---~~ 108 (428)
+...+|.++||| |+|.+|+++++++++||+|+|+||++||+ +|...++.|.++++.+++.+.++++|+|++|. +.
T Consensus 4 ~~~P~~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp 83 (170)
T 4hde_A 4 LRKPLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKP 83 (170)
T ss_dssp CCSCCCBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCH
T ss_pred cccCCCCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccH
Confidence 445678999999 99999999999999999999999999997 89999999999999999888789999999983 46
Q ss_pred HHHHHHHhcCC-----CceeccCChHHHHHHH-hhcC----------CCCCceEEEEcCCCCCCCcccc
Q 014225 109 NAFNNYRACMP-----WLAVPYSDLETKKALN-RKFD----------IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 109 ~~~~~~~~~~~-----~~~~~~~d~~~~~~l~-~~~~----------v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.+++|.++++ |..+...+......+. ..|+ +...|+++|||+ +|+++..
T Consensus 84 ~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~---~G~i~~~ 149 (170)
T 4hde_A 84 ENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQ---NGKVMKK 149 (170)
T ss_dssp HHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECT---TSCEEEE
T ss_pred HHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcC---CCeEEEE
Confidence 77889988753 4444433332212222 2232 345689999999 9998754
No 146
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.77 E-value=2.4e-19 Score=159.27 Aligned_cols=119 Identities=11% Similarity=0.089 Sum_probs=92.7
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC-------Ch
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE-------DL 108 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~-------~~ 108 (428)
.+|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|++++++|++++ +++++|++|. +.
T Consensus 24 ~~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~--v~vv~vs~d~~~~~e~~~~ 101 (181)
T 2p31_A 24 QQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHH--FNVLAFPCNQFGQQEPDSN 101 (181)
T ss_dssp ---CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCSCH
T ss_pred CcCCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCC--EEEEEEECcCCCCCCCCCH
Confidence 468999999 9999999999999999999999999999999999999999999999887 9999999884 66
Q ss_pred HHHHHHHhc-CCC--ceeccCChHH--HHHHHhhcCCCCCc-------eEEEEcCCCCCCCcccc
Q 014225 109 NAFNNYRAC-MPW--LAVPYSDLET--KKALNRKFDIEGIP-------CLVVLQPYDDKDDATLH 161 (428)
Q Consensus 109 ~~~~~~~~~-~~~--~~~~~~d~~~--~~~l~~~~~v~~~P-------~~~lid~~~~dG~i~~~ 161 (428)
+.+++|+++ ++. ..+...+.+. ...+ -.|.+..+| +++|||+ +|+++..
T Consensus 102 ~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~-~~~~~~~~P~~~~~~~~~~lid~---~G~i~~~ 162 (181)
T 2p31_A 102 KEIESFARRTYSVSFPMFSKIAVTGTGAHPA-FKYLAQTSGKEPTWNFWKYLVAP---DGKVVGA 162 (181)
T ss_dssp HHHHHHHHHHHCCCSCBBCCCCCSSTTSCHH-HHHHHHHHSCCCCSTTCEEEECT---TSCEEEE
T ss_pred HHHHHHHHhhcCCCceeEeecccCCccchhh-hhhhhhcCCCccccceeEEEEcC---CCCEEEE
Confidence 788888876 553 2221012110 0111 124466778 9999999 9999866
No 147
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.77 E-value=1.5e-18 Score=145.31 Aligned_cols=112 Identities=18% Similarity=0.313 Sum_probs=98.9
Q ss_pred cccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhc
Q 014225 39 ASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRAC 117 (428)
Q Consensus 39 g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~ 117 (428)
|..+|+| +.+.+|+.+++++++||+++|+||++||++|+.++|.|++++++++ + +.++.|+.|.+.+.+++++++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~--~~~~~v~~~~~~~~~~~~~~~ 77 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--E--VTFVGVAGLDQVPAMQEFVNK 77 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--T--SEEEEEECSSCHHHHHHHHHH
T ss_pred CCCCCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--C--eEEEEEeCCCCHHHHHHHHHH
Confidence 5678999 9999999999999999999999999999999999999999999987 3 999999999999999999998
Q ss_pred CCCceec-cCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcc
Q 014225 118 MPWLAVP-YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 159 (428)
Q Consensus 118 ~~~~~~~-~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~ 159 (428)
+++..++ +.+.. ..+.+.|++.++|+++++|+ +|+++
T Consensus 78 ~~~~~~~~~~d~~--~~~~~~~~i~~~P~~~~id~---~g~i~ 115 (136)
T 1zzo_A 78 YPVKTFTQLADTD--GSVWANFGVTQQPAYAFVDP---HGNVD 115 (136)
T ss_dssp TTCTTSEEEECTT--CHHHHHTTCCSSSEEEEECT---TCCEE
T ss_pred cCCCceEEEEcCC--cHHHHHcCCCCCceEEEECC---CCCEE
Confidence 8752222 22332 68899999999999999999 99886
No 148
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.77 E-value=5.1e-19 Score=153.40 Aligned_cols=120 Identities=16% Similarity=0.180 Sum_probs=101.5
Q ss_pred cccccccCc-cccCCCCEEecccCCCC-EEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGK-VTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNN 113 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~ 113 (428)
.+|..+|+| |.+.+|+++++++++|| +++|+|| ++||++|+.++|.|+++++++++.+ +++++|+.|. .+.+++
T Consensus 10 ~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--~~vv~is~d~-~~~~~~ 86 (160)
T 1xvw_A 10 NVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDD--SAALAISVGP-PPTHKI 86 (160)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSS--EEEEEEESCC-HHHHHH
T ss_pred CCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--cEEEEEeCCC-HHHHHH
Confidence 368999999 99999999999999998 9999998 9999999999999999999998766 9999999984 567888
Q ss_pred HHhcCCCceeccCChHHHHHHHhhcCCC----CCc--eEEEEcCCCCCCCccccc
Q 014225 114 YRACMPWLAVPYSDLETKKALNRKFDIE----GIP--CLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 114 ~~~~~~~~~~~~~d~~~~~~l~~~~~v~----~~P--~~~lid~~~~dG~i~~~~ 162 (428)
|++++++....+.|......+.+.|++. ++| +++|||+ +|+++...
T Consensus 87 ~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~---~G~i~~~~ 138 (160)
T 1xvw_A 87 WATQSGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDR---SGIIRFAE 138 (160)
T ss_dssp HHHHHTCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECT---TSBEEEEE
T ss_pred HHHhcCCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECC---CCeEEEEE
Confidence 9887765322222420126889999998 999 9999999 99998763
No 149
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.77 E-value=1.2e-18 Score=146.19 Aligned_cols=111 Identities=16% Similarity=0.298 Sum_probs=98.0
Q ss_pred ccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcC
Q 014225 40 SKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACM 118 (428)
Q Consensus 40 ~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~ 118 (428)
..+|+| +.+.+|+.+++++++||+++|+||++||++|+.++|.|++++++++ + +.+++|+.|.+.+.++++++++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~--~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--A--VTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--T--SEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--C--cEEEEEEcCCCHHHHHHHHHHc
Confidence 358999 9999999999999999999999999999999999999999999997 3 9999999999999999999987
Q ss_pred CCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcc
Q 014225 119 PWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 159 (428)
Q Consensus 119 ~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~ 159 (428)
++....+.+.+ ..+.+.|++.++|+++++|+ +|+++
T Consensus 78 ~~~~~~~~d~~--~~~~~~~~i~~~P~~~lid~---~G~i~ 113 (136)
T 1lu4_A 78 NLNFTNLNDAD--GVIWARYNVPWQPAFVFYRA---DGTST 113 (136)
T ss_dssp TCCSEEEECTT--SHHHHHTTCCSSSEEEEECT---TSCEE
T ss_pred CCCceEEECCc--hhHHHhcCCCCCCEEEEECC---CCcEE
Confidence 65322222433 68899999999999999999 99887
No 150
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.77 E-value=3.8e-19 Score=155.86 Aligned_cols=121 Identities=23% Similarity=0.324 Sum_probs=102.5
Q ss_pred hhccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChh-HHhhhHHHHHHHHHHHhhhhhcCCCC-CCEEEEEEEcC
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDAL-EDFEVVFVSTD 277 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~-C~~~~~~l~~l~~~~~~~~~~~~~~~-~~~~iv~is~d 277 (428)
+.|.++|+|++ +.+| .+++++++||++||+||++||++ |+.++|.|.+++++|+++ + .++.|++|++|
T Consensus 11 ~~G~~~p~f~l~~~~g--~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~-------~~~~v~vv~is~d 81 (172)
T 2k6v_A 11 LLNPKPVDFALEGPQG--PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPK-------AQERVQVIFVSVD 81 (172)
T ss_dssp EEEEEECCCEEECSSS--EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHH-------HHTTEEEEEEESC
T ss_pred ccCCCCCCeEEEcCCC--CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhh-------ccCCEEEEEEEEC
Confidence 45888999999 9988 89999999999999999999997 999999999999988753 1 26999999998
Q ss_pred C---CHHHHHHHHhcCCccccccCCcch---hHHHHhcCc---------------CccceEEEECCCCcEEecccc
Q 014225 278 R---DQTSFESYFGTMPWLALPFGDPTI---KELTKYFDV---------------QGIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 278 ~---~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~v---------------~~~P~~~lid~~G~i~~~~~~ 332 (428)
. +.+.+++|.++++ .++++..|.. ..+++.|++ .++|+++||| +|+|+.+..+
T Consensus 82 ~~~d~~~~~~~~~~~~~-~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g 155 (172)
T 2k6v_A 82 PERDPPEVADRYAKAFH-PSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSP 155 (172)
T ss_dssp TTTCCHHHHHHHHHHHC-TTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECH
T ss_pred CCCCCHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECC
Confidence 4 4678888988876 6778777765 577777764 5789999999 9999998543
No 151
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.77 E-value=3.1e-18 Score=155.62 Aligned_cols=76 Identities=14% Similarity=0.067 Sum_probs=69.9
Q ss_pred cccccCc-cccCC-CCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC-------ChH
Q 014225 39 ASKDRDY-LLNQH-GTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE-------DLN 109 (428)
Q Consensus 39 g~~~pdf-l~~~~-G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~-------~~~ 109 (428)
+..+|+| |.+.+ |+++++++++||+|||+|||+||++|+.++|.|++++++|++.+ ++||+|++|. +.+
T Consensus 23 ~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g--~~vv~v~~d~~~~~e~d~~~ 100 (208)
T 2f8a_A 23 MQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRG--LVVLGFPCNQFGHQENAKNE 100 (208)
T ss_dssp CCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCCSTTTTCSCHH
T ss_pred cCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCC--eEEEEEECCcccccCCCCHH
Confidence 5679999 99999 99999999999999999999999999999999999999999887 9999999872 457
Q ss_pred HHHHHHh
Q 014225 110 AFNNYRA 116 (428)
Q Consensus 110 ~~~~~~~ 116 (428)
..++|++
T Consensus 101 ~i~~f~~ 107 (208)
T 2f8a_A 101 EILNSLK 107 (208)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7888887
No 152
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.77 E-value=4.6e-18 Score=148.84 Aligned_cols=115 Identities=21% Similarity=0.322 Sum_probs=97.7
Q ss_pred cCc-cccCCCCEEecccCCCCEEEEEEecCCChh-hhhhHHHHHHHHHHHhcC--CCcEEEEEEecCC---ChHHHHHHH
Q 014225 43 RDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPP-CGNFTGVLVDVYEELRNN--GSDFEVVFVSSDE---DLNAFNNYR 115 (428)
Q Consensus 43 pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~-C~~~~p~l~~l~~~~~~~--~~~~~ii~vs~D~---~~~~~~~~~ 115 (428)
|+| |.+.+|+++++++++||+++|+||++||++ |+.++|.|++++++|++. ..++++++|++|. +.+.+++|+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~ 86 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYV 86 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHH
Confidence 899 999999999999999999999999999998 999999999999999852 1249999999984 567889999
Q ss_pred hcCC--CceeccCChHHHHHHHhhcCCCCCc---------------eEEEEcCCCCCCCcccc
Q 014225 116 ACMP--WLAVPYSDLETKKALNRKFDIEGIP---------------CLVVLQPYDDKDDATLH 161 (428)
Q Consensus 116 ~~~~--~~~~~~~d~~~~~~l~~~~~v~~~P---------------~~~lid~~~~dG~i~~~ 161 (428)
++++ |..+.. +.+....+++.|++..+| +++|||+ +|+++..
T Consensus 87 ~~~~~~~~~l~~-~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~---~G~i~~~ 145 (171)
T 2rli_A 87 QDFHPRLLGLTG-STKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNP---DGLFTDY 145 (171)
T ss_dssp HTTCTTCCEEEC-CHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECT---TSCEEEE
T ss_pred HHcCCCeEEEeC-CHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECC---CCeEEEE
Confidence 8765 433332 334446899999999888 8999999 9999875
No 153
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.77 E-value=1.1e-18 Score=155.63 Aligned_cols=118 Identities=19% Similarity=0.270 Sum_probs=100.9
Q ss_pred cccccccCc-cccCCCC----EEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHH
Q 014225 37 LLASKDRDY-LLNQHGT----QVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNA 110 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~----~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~ 110 (428)
.+|+.+|+| |.+.+|+ ++++++++||+++|+|| ++||++|+.++|.|++++++|++.+ +++++|+.|. .+.
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~vs~d~-~~~ 78 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLG--VEVYSVSTDT-HFV 78 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTT--EEEEEEESSC-HHH
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcC--CEEEEEECCC-HHH
Confidence 368899999 9999999 99999999999999999 9999999999999999999999876 9999999986 456
Q ss_pred HHHHHhcC----CCceeccCChHHHHHHHhhcCCC------CCceEEEEcCCCCCCCccccc
Q 014225 111 FNNYRACM----PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 111 ~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lid~~~~dG~i~~~~ 162 (428)
.++|.+++ ++......|.+ ..+++.|++. ++|+++|||+ +|+++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~~g~~~P~~~lid~---~G~i~~~~ 135 (187)
T 1we0_A 79 HKAWHENSPAVGSIEYIMIGDPS--QTISRQFDVLNEETGLADRGTFIIDP---DGVIQAIE 135 (187)
T ss_dssp HHHHHHSCHHHHTCCSEEEECTT--CHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEE
T ss_pred HHHHHHHhccccCCCceEEECCc--hHHHHHhCCCcCCCCceeeEEEEECC---CCeEEEEE
Confidence 78888876 43222222433 6889999998 9999999999 99998763
No 154
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.77 E-value=1.1e-18 Score=146.19 Aligned_cols=113 Identities=19% Similarity=0.337 Sum_probs=96.6
Q ss_pred cccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEe-----cCCChHHHHHH
Q 014225 41 KDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVS-----SDEDLNAFNNY 114 (428)
Q Consensus 41 ~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs-----~D~~~~~~~~~ 114 (428)
++|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|+++++++++. +.++.|. .+.+.+.++++
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~v~i~~~~~~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDD---YVVLTVVSPGHKGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTT---EEEEEEECTTSTTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCC---cEEEEEEcCCCCchhhHHHHHHH
Confidence 47999 999999999999999999999999999999999999999999995443 9999994 45677889999
Q ss_pred HhcCCCceecc-CChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 115 RACMPWLAVPY-SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 115 ~~~~~~~~~~~-~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++++++..++. .+.+ ..+.+.|++.++|+++++|+ +|+++..
T Consensus 78 ~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 120 (138)
T 4evm_A 78 YKGLDYKNLPVLVDPS--GKLLETYGVRSYPTQAFIDK---EGKLVKT 120 (138)
T ss_dssp HTTCCCTTCCEEECTT--CHHHHHTTCCSSSEEEEECT---TCCEEEE
T ss_pred HhhcCCCCeeEEECcc--hHHHHHcCcccCCeEEEECC---CCcEEEe
Confidence 99887633332 2332 68999999999999999999 9998765
No 155
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.77 E-value=7.1e-19 Score=156.99 Aligned_cols=118 Identities=23% Similarity=0.288 Sum_probs=99.1
Q ss_pred cccccccCc-cccC-CC--CEEecccCCCCEEEEEEec-CCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 37 LLASKDRDY-LLNQ-HG--TQVKVSDLEGKVTALYFSA-NWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 37 ~~g~~~pdf-l~~~-~G--~~v~l~~~~gk~vlv~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
.+|..+|+| |.+. +| +++++++++||+++|+||+ +||++|+.++|.|++++++|++.+ +++++|+.|. .+..
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~--v~vv~Is~d~-~~~~ 78 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLG--VDVYSVSTDT-HFTH 78 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTT--EEEEEEESSC-HHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCC--CEEEEEECCC-HHHH
Confidence 468999999 9998 59 8999999999999999995 999999999999999999999877 9999999985 4567
Q ss_pred HHHHhcC----CCceeccCChHHHHHHHhhcCCC------CCceEEEEcCCCCCCCccccc
Q 014225 112 NNYRACM----PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 112 ~~~~~~~----~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lid~~~~dG~i~~~~ 162 (428)
++|.+++ ++.+..+.|.+ ..+++.|++. .+|+++|||+ +|+++...
T Consensus 79 ~~~~~~~~~~~~~~fp~l~D~~--~~~~~~ygv~~~~~g~~~p~~~lID~---~G~i~~~~ 134 (186)
T 1n8j_A 79 KAWHSSSETIAKIKYAMIGDPT--GALTRNFDNMREDEGLADRATFVVDP---QGIIQAIE 134 (186)
T ss_dssp HHHHHHCTTGGGCCSEEEECTT--SHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEE
T ss_pred HHHHHHcCcccCCceeEEECCc--hHHHHHhCCccCCCCceeeEEEEECC---CCeEEEEE
Confidence 8888877 43211122433 6789999987 4799999999 99998764
No 156
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.77 E-value=4.1e-19 Score=156.05 Aligned_cols=117 Identities=14% Similarity=0.129 Sum_probs=84.3
Q ss_pred cccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC-------CChHH
Q 014225 39 ASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-------EDLNA 110 (428)
Q Consensus 39 g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D-------~~~~~ 110 (428)
+..+|+| |.+.+|+++++++++||+++|+||++||++|+ ++|.|++++++|++.+ +++++|++| .+.+.
T Consensus 9 ~~~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~--v~vv~vs~d~~~~~~~d~~~~ 85 (171)
T 3cmi_A 9 MSEFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEG--FTIIGFPCNQFGHQEPGSDEE 85 (171)
T ss_dssp -CGGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGT--EEEEEEEECSCC---------
T ss_pred hhheeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCC--eEEEEEECcccCCCCCCCHHH
Confidence 5678999 99999999999999999999999999999999 9999999999999887 999999986 45567
Q ss_pred HHHHH-hcCCC--ceeccCChH------HHHH-HHhhcCCCCCc------eEEEEcCCCCCCCcccc
Q 014225 111 FNNYR-ACMPW--LAVPYSDLE------TKKA-LNRKFDIEGIP------CLVVLQPYDDKDDATLH 161 (428)
Q Consensus 111 ~~~~~-~~~~~--~~~~~~d~~------~~~~-l~~~~~v~~~P------~~~lid~~~~dG~i~~~ 161 (428)
+++|+ ++++. ..+...+.. .... ..+.|++.++| +++|||+ +|+++..
T Consensus 86 ~~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~---~G~i~~~ 149 (171)
T 3cmi_A 86 IAQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDK---KGKVYER 149 (171)
T ss_dssp ---------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECS---SSCEEEE
T ss_pred HHHHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECC---CCCEEEE
Confidence 78888 66543 222111111 0011 12468999999 9999999 9999876
No 157
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.76 E-value=9.2e-19 Score=152.91 Aligned_cols=119 Identities=9% Similarity=0.100 Sum_probs=92.7
Q ss_pred ccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC-------ChH
Q 014225 38 LASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE-------DLN 109 (428)
Q Consensus 38 ~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~-------~~~ 109 (428)
.|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|++++++|++++ +++++|++|. +.+
T Consensus 7 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~d~~~~~~~~~~~ 84 (169)
T 2v1m_A 7 SWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKG--LRILAFPCNQFGGQEPWAEA 84 (169)
T ss_dssp CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCSCHH
T ss_pred CCcccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCC--eEEEEEECCccCCCCCCCHH
Confidence 58899999 9999999999999999999999999999999999999999999999877 9999999873 456
Q ss_pred HHHHH-HhcCC--CceeccCChHH--HHHHH-----hhcC-----CCCCceEEEEcCCCCCCCcccc
Q 014225 110 AFNNY-RACMP--WLAVPYSDLET--KKALN-----RKFD-----IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 110 ~~~~~-~~~~~--~~~~~~~d~~~--~~~l~-----~~~~-----v~~~P~~~lid~~~~dG~i~~~ 161 (428)
.+++| .++++ |..+...|.+. ...+. ..++ +..+|+++|||+ +|+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~---~G~i~~~ 148 (169)
T 2v1m_A 85 EIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDR---QGQPVKR 148 (169)
T ss_dssp HHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECT---TSCEEEE
T ss_pred HHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECC---CCCEEEE
Confidence 78888 46554 32221012110 01111 1124 556799999999 9999876
No 158
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.76 E-value=1.4e-18 Score=151.92 Aligned_cols=120 Identities=13% Similarity=0.195 Sum_probs=93.5
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC-------CCh
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-------EDL 108 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D-------~~~ 108 (428)
..|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|+++++++++++ +++++|++| .+.
T Consensus 7 ~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~vs~d~~~~~~~~~~ 84 (170)
T 2p5q_A 7 KNPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQG--LEILAFPCNQFGEEEPGTN 84 (170)
T ss_dssp ---CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCTTTTCCCSCH
T ss_pred CCCccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCC--EEEEEEECCCCCCCCCCCH
Confidence 368899999 9999999999999999999999999999999999999999999999886 999999997 366
Q ss_pred HHHHHHHh-cCCC--ceeccCChHH--HHHHH-----hhcCC--CCCc---eEEEEcCCCCCCCcccc
Q 014225 109 NAFNNYRA-CMPW--LAVPYSDLET--KKALN-----RKFDI--EGIP---CLVVLQPYDDKDDATLH 161 (428)
Q Consensus 109 ~~~~~~~~-~~~~--~~~~~~d~~~--~~~l~-----~~~~v--~~~P---~~~lid~~~~dG~i~~~ 161 (428)
+.+++|++ +++. ..+...|.+. ...+. +.+++ .++| +++|||+ +|+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~---~G~i~~~ 149 (170)
T 2p5q_A 85 DQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNK---DGQVVDR 149 (170)
T ss_dssp HHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECT---TSCEEEE
T ss_pred HHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECC---CCCEEEe
Confidence 78888888 5543 2221012210 01122 23466 7788 9999999 9999876
No 159
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.76 E-value=1.1e-18 Score=159.98 Aligned_cols=117 Identities=15% Similarity=0.238 Sum_probs=99.6
Q ss_pred cccccccCc-cccC--CC--CEEecccC-CCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChH
Q 014225 37 LLASKDRDY-LLNQ--HG--TQVKVSDL-EGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLN 109 (428)
Q Consensus 37 ~~g~~~pdf-l~~~--~G--~~v~l~~~-~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~ 109 (428)
.+|..+|+| |.+. +| ++++++++ +||++||+|| ++||++|+.++|.|++++++|++.+ ++||+|+.|. .+
T Consensus 26 ~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~--v~vv~Is~D~-~~ 102 (221)
T 2c0d_A 26 LVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKN--VELLGISVDS-VY 102 (221)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTT--EEEEEEESSC-HH
T ss_pred CCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEeCCC-HH
Confidence 468999999 9998 99 99999999 9999999999 9999999999999999999999877 9999999975 45
Q ss_pred HHHHHHhcC-------CCceec-cCChHHHHHHHhhcCC-----CCCceEEEEcCCCCCCCccccc
Q 014225 110 AFNNYRACM-------PWLAVP-YSDLETKKALNRKFDI-----EGIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 110 ~~~~~~~~~-------~~~~~~-~~d~~~~~~l~~~~~v-----~~~P~~~lid~~~~dG~i~~~~ 162 (428)
..++|.+++ ++ .+| +.|.+ ..+++.|++ ..+|+++|||+ +|+|+...
T Consensus 103 ~~~~~~~~~~~~~g~~~~-~fp~l~D~~--~~~~~~ygv~~~~g~~~P~~~lID~---~G~I~~~~ 162 (221)
T 2c0d_A 103 SHLAWKNMPIEKGGIGNV-EFTLVSDIN--KDISKNYNVLYDNSFALRGLFIIDK---NGCVRHQT 162 (221)
T ss_dssp HHHHHHHSCGGGTCCCSC-SSEEEECTT--SHHHHHTTCEETTTEECEEEEEECT---TSBEEEEE
T ss_pred HHHHHHHHhhhhcCccCC-ceEEEECCc--hHHHHHcCCcccCCCccceEEEECC---CCeEEEEE
Confidence 577888766 32 222 22433 689999999 47999999999 99998774
No 160
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.76 E-value=2.9e-18 Score=147.45 Aligned_cols=116 Identities=19% Similarity=0.284 Sum_probs=101.0
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEec--CCChHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS--DEDLNAFNN 113 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~--D~~~~~~~~ 113 (428)
.+|..+|+| +.+.+|+++++++++ |+++|+||++||++|+.++|.|+++++++ + +.+++|++ +.+.+.+++
T Consensus 6 ~~g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~--v~~v~v~~d~~~~~~~~~~ 79 (154)
T 3ia1_A 6 KPGEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---G--VPFYVISREPRDTREVVLE 79 (154)
T ss_dssp CSBEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---C--CCEEEEECCTTCCHHHHHH
T ss_pred CCCCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---C--CeEEEEeCCCcccHHHHHH
Confidence 368899999 999999999999999 99999999999999999999999999999 3 88999999 677889999
Q ss_pred HHhcCCCceeccCC-hHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 114 YRACMPWLAVPYSD-LETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 114 ~~~~~~~~~~~~~d-~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+++++++....+.+ .+....+.+.|++.++|++++||+ +|+++..
T Consensus 80 ~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 125 (154)
T 3ia1_A 80 YMKTYPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDR---EGKVVAL 125 (154)
T ss_dssp HHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECT---TSEEEEE
T ss_pred HHHHcCCCcccccccccchHHHHHHhCCCcccEEEEECC---CCCEEEE
Confidence 99998864333333 123389999999999999999999 9988765
No 161
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.76 E-value=6.8e-19 Score=157.88 Aligned_cols=118 Identities=14% Similarity=0.237 Sum_probs=101.9
Q ss_pred cccccccCc-cc-cCCCCEEecccCCCC-EEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC-------C
Q 014225 37 LLASKDRDY-LL-NQHGTQVKVSDLEGK-VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-------E 106 (428)
Q Consensus 37 ~~g~~~pdf-l~-~~~G~~v~l~~~~gk-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D-------~ 106 (428)
.+|..+|+| |. +.+|+++++++++|| +++|+||++||++|+.++|.|++++++|++++ +.+++|++| .
T Consensus 19 ~~g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~v~~d~~~~~~~d 96 (196)
T 2ywi_A 19 PLGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKG--VSFVAINSNDAEQYPED 96 (196)
T ss_dssp CTTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGT--CEEEEEECSCTTTCGGG
T ss_pred CcCCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCC--cEEEEEECCcccccccc
Confidence 468899999 99 999999999999998 59999999999999999999999999999876 999999997 5
Q ss_pred ChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 107 DLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.+.+++|++++++....+.+.+ ..+.+.|++.++|+++|||+ +|+++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 146 (196)
T 2ywi_A 97 SPENMKKVAEELGYPFPYLYDET--QEVAKAYDAACTPDFYIFDR---DLKCVYR 146 (196)
T ss_dssp SHHHHHHHHHHHTCCSCEEECSS--CHHHHHHTCCEESEEEEEET---TCBEEEE
T ss_pred CHHHHHHHHHHcCCCceEEECCc--hHHHHHhCCCCCCeEEEEcC---CCeEEEc
Confidence 67888999987664221122332 67899999999999999999 9999876
No 162
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.76 E-value=1.8e-18 Score=159.02 Aligned_cols=140 Identities=11% Similarity=0.153 Sum_probs=109.6
Q ss_pred hhccCCCCccc-CCCCCceecccccCCc--EEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPVSSLVGK--TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l~~~~gk--~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
.+|.++|+|++ +.+| .+++++++|| +||++||++|||+|..+++.|.+++++|+++ +++||+||+|
T Consensus 6 ~~G~~aP~F~l~~~~G--~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~---------~v~vi~IS~D 74 (224)
T 1prx_A 6 LLGDVAPNFEANTTVG--RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKR---------NVKLIALSID 74 (224)
T ss_dssp CTTCBCCCCEEEETTE--EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTT---------TEEEEEEESS
T ss_pred CCcCCCCCcEEecCCC--CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHC---------CCEEEEEcCC
Confidence 36999999999 8887 6999999997 4666668999999999999999999999876 8999999999
Q ss_pred CCHHHHHHHHhc---C------CccccccCCcchhHHHHhcCcC------------ccceEEEECCCCcEEeccccchhh
Q 014225 278 RDQTSFESYFGT---M------PWLALPFGDPTIKELTKYFDVQ------------GIPCLVIIGPEGKTVTKQGRNLIN 336 (428)
Q Consensus 278 ~~~~~~~~~~~~---~------~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~~~~~~ 336 (428)
. .+..++|.+. . ..++||+..|....+++.||+. .+|++||||++|+|+....+.+
T Consensus 75 ~-~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~-- 151 (224)
T 1prx_A 75 S-VEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPA-- 151 (224)
T ss_dssp C-HHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCT--
T ss_pred C-HHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCC--
Confidence 4 4445555543 0 3478899889889999999984 4799999999999999853321
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHh
Q 014225 337 LYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 337 ~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
. .....++|.+.|+.+..
T Consensus 152 -----~---~gr~~~eil~~i~~l~~ 169 (224)
T 1prx_A 152 -----T---TGRNFDEILRVVISLQL 169 (224)
T ss_dssp -----T---BCCCHHHHHHHHHHHHH
T ss_pred -----C---CCCCHHHHHHHHHHHHh
Confidence 0 11234666666766543
No 163
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.76 E-value=3.2e-18 Score=154.72 Aligned_cols=122 Identities=19% Similarity=0.241 Sum_probs=104.7
Q ss_pred HhhhhccCCCCccc----CCCCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEE
Q 014225 198 LINLLTNHDRGYLL----GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVV 272 (428)
Q Consensus 198 ~~~~~g~~~p~f~l----~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv 272 (428)
+...+|+++|+|++ |.+++ +++|++++||+|||+|| +.|||.|..+++.|++.+++|++. +++|+
T Consensus 21 M~~~VG~~APdF~l~a~~d~~~~-~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~---------g~~vi 90 (216)
T 3sbc_A 21 MVAQVQKQAPTFKKTAVVDGVFD-EVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ---------GAQVL 90 (216)
T ss_dssp -CCCTTSBCCCCCEEEEETTEEE-EECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT---------TEEEE
T ss_pred chhhcCCcCCCCCCcceECCCCc-EEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC---------CceEE
Confidence 34468999999986 55667 99999999999999999 899999999999999999999987 89999
Q ss_pred EEEcCCCHHHHHHHHhcC------CccccccCCcchhHHHHhcCcC------ccceEEEECCCCcEEecc
Q 014225 273 FVSTDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 273 ~is~d~~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~ 330 (428)
+||+| +.....+|.... ..++||++.|.+.++++.||+- ..+.+||||++|+|++..
T Consensus 91 giS~D-s~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~ 159 (216)
T 3sbc_A 91 FASTD-SEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHIT 159 (216)
T ss_dssp EEESS-CHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred EeecC-chhhHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEE
Confidence 99999 555666666543 2478999999999999999983 468999999999998864
No 164
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.76 E-value=2.2e-18 Score=153.20 Aligned_cols=120 Identities=12% Similarity=0.057 Sum_probs=95.5
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC-------CCh
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-------EDL 108 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D-------~~~ 108 (428)
.+|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|++++++|++++ +++++|++| .+.
T Consensus 22 ~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~--v~vv~vs~d~~~~~e~~~~ 99 (183)
T 2obi_A 22 RCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECG--LRILAFPCNQFGKQEPGSN 99 (183)
T ss_dssp GGCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCSCH
T ss_pred cccCcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCC--eEEEEEECCCCCCCCCCCH
Confidence 468999999 9999999999999999999999999999999999999999999999877 999999987 366
Q ss_pred HHHHHHHhcCCCceeccC--ChHH--HHHHHhhc-------C-----CCCCceEEEEcCCCCCCCcccc
Q 014225 109 NAFNNYRACMPWLAVPYS--DLET--KKALNRKF-------D-----IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~--d~~~--~~~l~~~~-------~-----v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.+++|++++++....+. |.+. ...+.+.+ + +..+|+++|||+ +|+++..
T Consensus 100 ~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~---~G~i~~~ 165 (183)
T 2obi_A 100 EEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK---NGCVVKR 165 (183)
T ss_dssp HHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECT---TSCEEEE
T ss_pred HHHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECC---CCCEEEE
Confidence 788999988764221111 2110 01122211 3 455799999999 9999876
No 165
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.76 E-value=1.2e-18 Score=152.88 Aligned_cols=116 Identities=14% Similarity=0.165 Sum_probs=98.6
Q ss_pred ccccccCc-cc-cCCCCEEecccC-CCCEEEEEEe-cCCChhhhh-hHHHHHHHHHHHhcCCCcE-EEEEEecCCChHHH
Q 014225 38 LASKDRDY-LL-NQHGTQVKVSDL-EGKVTALYFS-ANWYPPCGN-FTGVLVDVYEELRNNGSDF-EVVFVSSDEDLNAF 111 (428)
Q Consensus 38 ~g~~~pdf-l~-~~~G~~v~l~~~-~gk~vlv~F~-a~wC~~C~~-~~p~l~~l~~~~~~~~~~~-~ii~vs~D~~~~~~ 111 (428)
+|+.+|+| |. +.+|++++|+++ +||+++|+|| ++||++|+. ++|.|++++++|++.| + +|++||.|. .+..
T Consensus 5 ~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~Is~d~-~~~~ 81 (167)
T 2wfc_A 5 EGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKG--VDIIACMAVND-SFVM 81 (167)
T ss_dssp TTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTT--CCEEEEEESSC-HHHH
T ss_pred CCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCCC-HHHH
Confidence 68999999 99 999999999998 9998888886 999999999 9999999999999887 9 999999974 5678
Q ss_pred HHHHhcCCCc-eec-cCChHHHHHHHhhcCCCCC-----------ceEEEEcCCCCCCCccccc
Q 014225 112 NNYRACMPWL-AVP-YSDLETKKALNRKFDIEGI-----------PCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 112 ~~~~~~~~~~-~~~-~~d~~~~~~l~~~~~v~~~-----------P~~~lid~~~~dG~i~~~~ 162 (428)
++|.+++++. .+| ..|.+ ..+.+.||+... |+++|| + +|+|++..
T Consensus 82 ~~~~~~~~~~~~fp~l~D~~--~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~---~G~I~~~~ 139 (167)
T 2wfc_A 82 DAWGKAHGADDKVQMLADPG--GAFTKAVDMELDLSAVLGNVRSKRYSLVI-E---DGVVTKVN 139 (167)
T ss_dssp HHHHHHTTCTTTSEEEECTT--SHHHHHTTCEECCHHHHSSCEECCEEEEE-E---TTEEEEEE
T ss_pred HHHHHhcCCCcceEEEECCC--CcHHHHcCCccccccccCcccceEEEEEE-e---CCEEEEEE
Confidence 8898887653 123 23543 789999998653 999999 8 99998763
No 166
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.76 E-value=1.5e-18 Score=154.54 Aligned_cols=120 Identities=12% Similarity=0.054 Sum_probs=94.0
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC-------Ch
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE-------DL 108 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~-------~~ 108 (428)
.+|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|++++++|++++ +++++|++|. +.
T Consensus 24 ~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~--v~vv~is~d~~~~~~~~~~ 101 (185)
T 2gs3_A 24 RCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECG--LRILAFPCNQFGKQEPGSN 101 (185)
T ss_dssp GGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCTTTTCCCSCH
T ss_pred cCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCC--eEEEEEECcccCCCCCCCH
Confidence 368899999 9999999999999999999999999999999999999999999999887 9999999873 45
Q ss_pred HHHHHHHhcCCCceeccC--ChHH--HHHHHhhc-------C-----CCCCceEEEEcCCCCCCCcccc
Q 014225 109 NAFNNYRACMPWLAVPYS--DLET--KKALNRKF-------D-----IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~--d~~~--~~~l~~~~-------~-----v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.+++++++++.....+. |.+. ...+.+.+ + +..+|+++|||+ +|+++..
T Consensus 102 ~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~---~G~i~~~ 167 (185)
T 2gs3_A 102 EEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK---NGCVVKR 167 (185)
T ss_dssp HHHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECT---TSCEEEE
T ss_pred HHHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECC---CCCEEEe
Confidence 778889887764211111 1110 01122111 3 344799999999 9999876
No 167
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.76 E-value=1.1e-18 Score=148.41 Aligned_cols=116 Identities=16% Similarity=0.132 Sum_probs=99.9
Q ss_pred ccccccCc-c--ccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC-----ChH
Q 014225 38 LASKDRDY-L--LNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE-----DLN 109 (428)
Q Consensus 38 ~g~~~pdf-l--~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~-----~~~ 109 (428)
+|..+|+| + .+.+|+++++++++||+++|+||++||++|+.++|.|++++++++++ +.+++|++|. +.+
T Consensus 3 ~g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---~~~~~v~~~~~~~~~~~~ 79 (148)
T 2b5x_A 3 LRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ---LNVVAVHMPRSEDDLDPG 79 (148)
T ss_dssp TTCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEECCCSTTTSSHH
T ss_pred CCCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEEcCCCccccCHH
Confidence 58899999 7 68999999999999999999999999999999999999999999775 8999999876 678
Q ss_pred HHHHHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 110 AFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 110 ~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
.++++++++++......+.. ..+++.|++.++|+++++|+ +|+++..
T Consensus 80 ~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 126 (148)
T 2b5x_A 80 KIKETAAEHDITQPIFVDSD--HALTDAFENEYVPAYYVFDK---TGQLRHF 126 (148)
T ss_dssp HHHHHHHHTTCCSCEEECSS--CHHHHHTCCCCSSEEEEECT---TCBEEEE
T ss_pred HHHHHHHHcCCCcceEECCc--hhHHHHhCCCCCCEEEEECC---CCcEEEE
Confidence 89999998775221112332 68999999999999999999 9988764
No 168
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.75 E-value=1.8e-18 Score=155.04 Aligned_cols=116 Identities=16% Similarity=0.224 Sum_probs=99.6
Q ss_pred ccccccCc-cccC--CC--CEEecccC-CCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHH
Q 014225 38 LASKDRDY-LLNQ--HG--TQVKVSDL-EGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNA 110 (428)
Q Consensus 38 ~g~~~pdf-l~~~--~G--~~v~l~~~-~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~ 110 (428)
+|+.+|+| |.+. +| ++++++++ +||+++|+|| ++||++|+.++|.|++++++|++.+ +++++|+.|. .+.
T Consensus 2 ~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~Is~d~-~~~ 78 (192)
T 2h01_A 2 FQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERN--VELLGCSVDS-KFT 78 (192)
T ss_dssp CSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTT--EEEEEEESSC-HHH
T ss_pred CCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEEeCC-HHH
Confidence 58899999 9998 99 89999999 9999999999 9999999999999999999999876 9999999984 556
Q ss_pred HHHHHhcC-------CCceec-cCChHHHHHHHhhcCCC-----CCceEEEEcCCCCCCCccccc
Q 014225 111 FNNYRACM-------PWLAVP-YSDLETKKALNRKFDIE-----GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 111 ~~~~~~~~-------~~~~~~-~~d~~~~~~l~~~~~v~-----~~P~~~lid~~~~dG~i~~~~ 162 (428)
.++|.+.+ ++ .++ +.|.+ ..+++.|++. .+|+++|||+ +|+++...
T Consensus 79 ~~~~~~~~~~~~~~~~~-~~~~l~D~~--~~~~~~~gv~~~~g~~~P~~~liD~---~G~i~~~~ 137 (192)
T 2h01_A 79 HLAWKKTPLSQGGIGNI-KHTLISDIS--KSIARSYDVLFNESVALRAFVLIDK---QGVVQHLL 137 (192)
T ss_dssp HHHHHTSCGGGTCCCSC-SSEEEECTT--SHHHHHTTCEETTTEECCEEEEECT---TSBEEEEE
T ss_pred HHHHHHhHHhhCCccCC-CcCeEECCc--HHHHHHhCCcCcCCceeeEEEEEcC---CCEEEEEE
Confidence 78888766 32 222 22333 6899999999 8999999999 99998764
No 169
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.75 E-value=1.7e-18 Score=151.31 Aligned_cols=118 Identities=14% Similarity=0.130 Sum_probs=98.3
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
.+|..+|+| |.+.+|+++++++++||+++|+|| ++||++|+.++|.|++++++| .+ +++++|+.|. .+..++|
T Consensus 18 ~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~--v~vv~Is~d~-~~~~~~~ 92 (165)
T 1q98_A 18 QVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SN--TIVLCISADL-PFAQARF 92 (165)
T ss_dssp CTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TT--EEEEEEESSC-HHHHTTC
T ss_pred CCCCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CC--CEEEEEeCCC-HHHHHHH
Confidence 368999999 999999999999999999999999 899999999999999999999 44 9999999975 5567888
Q ss_pred HhcCCCceec-cCChHHHHHHHhhcCCCC---------CceEEEEcCCCCCCCcccccc
Q 014225 115 RACMPWLAVP-YSDLETKKALNRKFDIEG---------IPCLVVLQPYDDKDDATLHDG 163 (428)
Q Consensus 115 ~~~~~~~~~~-~~d~~~~~~l~~~~~v~~---------~P~~~lid~~~~dG~i~~~~~ 163 (428)
.+++++..++ +.|.. ...+.+.|++.. +|+++|||+ +|+|+....
T Consensus 93 ~~~~~~~~~~~l~D~~-~~~~~~~~gv~~~~~~~~g~~~p~~~liD~---~G~i~~~~~ 147 (165)
T 1q98_A 93 CGAEGIENAKTVSTFR-NHALHSQLGVDIQTGPLAGLTSRAVIVLDE---QNNVLHSQL 147 (165)
T ss_dssp TTTTTCTTEEEEECTT-CTHHHHHTTCEECSSTTTTSBCCEEEEECT---TSBEEEEEE
T ss_pred HHHcCCCceEEeeccc-cchHHHHhCceecccccCCccceeEEEEcC---CCEEEEEEe
Confidence 8877652122 33431 268899999853 599999999 999987743
No 170
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.75 E-value=1.8e-18 Score=155.80 Aligned_cols=117 Identities=13% Similarity=0.169 Sum_probs=99.7
Q ss_pred ccccccCc-cccC--CCC---EEecccC-CCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChH
Q 014225 38 LASKDRDY-LLNQ--HGT---QVKVSDL-EGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLN 109 (428)
Q Consensus 38 ~g~~~pdf-l~~~--~G~---~v~l~~~-~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~ 109 (428)
+|..+|+| |.+. +|+ +++++++ +||+++|+|| ++||++|+.++|.|++++++|++.+ +++++|+.|. .+
T Consensus 3 ~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Is~d~-~~ 79 (198)
T 1zof_A 3 VTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKG--FNVIGVSIDS-EQ 79 (198)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTT--EEEEEEESSC-HH
T ss_pred CCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEEECCC-HH
Confidence 68999999 9998 898 9999999 9999999999 9999999999999999999999876 9999999985 56
Q ss_pred HHHHHHhc-------CCCceeccCChHHHHHHHhhcCCC-----CCceEEEEcCCCCCCCccccc
Q 014225 110 AFNNYRAC-------MPWLAVPYSDLETKKALNRKFDIE-----GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 110 ~~~~~~~~-------~~~~~~~~~d~~~~~~l~~~~~v~-----~~P~~~lid~~~~dG~i~~~~ 162 (428)
..++|.++ +++....+.|.+ ..+.+.|++. ++|+++|||+ +|+++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~g~~~P~~~lid~---~G~i~~~~ 139 (198)
T 1zof_A 80 VHFAWKNTPVEKGGIGQVSFPMVADIT--KSISRDYDVLFEEAIALRGAFLIDK---NMKVRHAV 139 (198)
T ss_dssp HHHHHHTSCGGGTCCCCCSSCEEECTT--SHHHHHTTCEETTTEECEEEEEEET---TTEEEEEE
T ss_pred HHHHHHHhhhhcccccCceeEEEECCc--hHHHHHhCCcccCCcccceEEEECC---CCEEEEEE
Confidence 67888876 343211122333 6889999999 9999999999 99998763
No 171
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.75 E-value=2e-18 Score=155.21 Aligned_cols=117 Identities=15% Similarity=0.224 Sum_probs=99.6
Q ss_pred ccccccCc-cccCC-------------C--CEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEE
Q 014225 38 LASKDRDY-LLNQH-------------G--TQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVV 100 (428)
Q Consensus 38 ~g~~~pdf-l~~~~-------------G--~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii 100 (428)
+|..+|+| |.+.+ | +++++++++||+++|+|| ++||++|+.++|.|++++++|++.+ ++++
T Consensus 6 ~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv 83 (195)
T 2bmx_A 6 IGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRD--AQIL 83 (195)
T ss_dssp TTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTT--EEEE
T ss_pred CCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCC--CEEE
Confidence 68999999 98887 7 899999999999999999 9999999999999999999999876 9999
Q ss_pred EEecCCChHHHHHHHhcC----CCceeccCChHHHHHHHhhcCCC-----CCceEEEEcCCCCCCCccccc
Q 014225 101 FVSSDEDLNAFNNYRACM----PWLAVPYSDLETKKALNRKFDIE-----GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 101 ~vs~D~~~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~v~-----~~P~~~lid~~~~dG~i~~~~ 162 (428)
+|++|. .+..++|.+++ ++....+.|.+ ..+.+.|++. ++|+++|||+ +|+++...
T Consensus 84 ~Vs~d~-~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~g~~~P~~~lid~---~G~i~~~~ 148 (195)
T 2bmx_A 84 GVSIDS-EFAHFQWRAQHNDLKTLPFPMLSDIK--RELSQAAGVLNADGVADRVTFIVDP---NNEIQFVS 148 (195)
T ss_dssp EEESSC-HHHHHHHHHHCTTGGGCCSCEEECTT--SHHHHHHTCBCTTSSBCEEEEEECT---TSBEEEEE
T ss_pred EEECCC-HHHHHHHHHHhccccCCceeEEeCCc--hHHHHHhCCcccCCCccceEEEEcC---CCeEEEEE
Confidence 999986 55678888776 33211122333 6889999999 9999999999 99998763
No 172
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.75 E-value=2.1e-18 Score=157.99 Aligned_cols=139 Identities=11% Similarity=0.135 Sum_probs=107.9
Q ss_pred hhccCCCCccc-CC--CCCceecccccCCc-E-EEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 201 LLTNHDRGYLL-GH--PPDEKVPVSSLVGK-T-VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 201 ~~g~~~p~f~l-~~--~g~~~v~l~~~~gk-~-vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
.+|.++|+|++ +. +| .+++++++|| + ||++||++|||+|..+++.|.+++++|+++ +++||+||
T Consensus 4 ~iG~~aP~F~l~~~~~~G--~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~---------~v~vi~vS 72 (220)
T 1xcc_A 4 HLGATFPNFTAKASGIDG--DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKL---------NCKLIGFS 72 (220)
T ss_dssp CTTCBCCCCEECBTTCSS--CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTT---------TEEEEEEE
T ss_pred CCCCCCCCcEeecccCCC--cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHc---------CCEEEEEe
Confidence 36999999999 77 66 6999999998 4 555568999999999999999999999876 89999999
Q ss_pred cCCCHHHHHHHHh------cCCccccccCCcchhHHHHhcCcC------------ccceEEEECCCCcEEeccccchhhc
Q 014225 276 TDRDQTSFESYFG------TMPWLALPFGDPTIKELTKYFDVQ------------GIPCLVIIGPEGKTVTKQGRNLINL 337 (428)
Q Consensus 276 ~d~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~~~~~~~ 337 (428)
+|. ....++|.+ ....++||+..|.+..+++.||+. .+|++||||++|+|+....+.+
T Consensus 73 ~D~-~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~--- 148 (220)
T 1xcc_A 73 CNS-KESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPA--- 148 (220)
T ss_dssp SSC-HHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECT---
T ss_pred CCC-HHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCC---
Confidence 994 444455544 123478999989889999999983 4799999999999999853321
Q ss_pred ccccCCCCChHHHHHHHHHHHHHH
Q 014225 338 YQENAYPFTEAKLEFLEKQMEEEA 361 (428)
Q Consensus 338 ~g~~~~p~~~~~~~~L~~~l~~~~ 361 (428)
. .....++|.+.|+++.
T Consensus 149 ----~---~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 149 ----T---TGRNAHEILRVLKSLQ 165 (220)
T ss_dssp ----T---BCCCHHHHHHHHHHHH
T ss_pred ----C---CCCCHHHHHHHHHHHH
Confidence 0 1123466666666654
No 173
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.75 E-value=2e-18 Score=150.50 Aligned_cols=116 Identities=18% Similarity=0.206 Sum_probs=96.9
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEec-CCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSA-NWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
.+|..+|+| |.+.+|+++++++++||+++|+||+ +||++|+.++|.|++++++| .+ +++++|+.|. .+..++|
T Consensus 17 ~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~--v~vv~is~d~-~~~~~~~ 91 (163)
T 1psq_A 17 QVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DN--TVVLTVSMDL-PFAQKRW 91 (163)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TT--EEEEEEESSC-HHHHHHH
T ss_pred CCCCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CC--cEEEEEECCC-HHHHHHH
Confidence 468999999 9999999999999999999999995 99999999999999999999 44 9999999985 5567888
Q ss_pred HhcCCC-ceeccCC-hHHHHHHHhhcCCC----C--CceEEEEcCCCCCCCccccc
Q 014225 115 RACMPW-LAVPYSD-LETKKALNRKFDIE----G--IPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 115 ~~~~~~-~~~~~~d-~~~~~~l~~~~~v~----~--~P~~~lid~~~~dG~i~~~~ 162 (428)
.+++++ ......| .+ ..+.+.|++. + .|+++|||+ +|+++...
T Consensus 92 ~~~~~~~~~~~l~D~~~--~~~~~~~gv~~~~~g~~~p~~~liD~---~G~i~~~~ 142 (163)
T 1psq_A 92 CGAEGLDNAIMLSDYFD--HSFGRDYALLINEWHLLARAVFVLDT---DNTIRYVE 142 (163)
T ss_dssp HHHHTCTTSEEEECTTT--CHHHHHHTCBCTTTCSBCCEEEEECT---TCBEEEEE
T ss_pred HHhcCCCCcEEecCCch--hHHHHHhCCccccCCceEEEEEEEcC---CCeEEEEE
Confidence 887654 2222224 33 6889999987 3 499999999 99998764
No 174
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.75 E-value=6.1e-18 Score=152.68 Aligned_cols=122 Identities=16% Similarity=0.291 Sum_probs=98.0
Q ss_pred ccccccc--cCc-cccCCCCEEecccCCCCEEEEEEecCCChh-hhhhHHHHHHHHHHHhcC-CCcEEEEEEecCC---C
Q 014225 36 SLLASKD--RDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPP-CGNFTGVLVDVYEELRNN-GSDFEVVFVSSDE---D 107 (428)
Q Consensus 36 ~~~g~~~--pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~-C~~~~p~l~~l~~~~~~~-~~~~~ii~vs~D~---~ 107 (428)
..+|..+ |+| |.+.+|+++++++++||++||+||++||++ |+.++|.|+++++++++. +.++++++|++|. +
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~ 92 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDS 92 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCC
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCC
Confidence 3457665 999 999999999999999999999999999998 999999999999999864 2349999999995 6
Q ss_pred hHHHHHHHhcCC--CceeccCChHHHHHHHhhcCCC-CCc---------------eEEEEcCCCCCCCcccc
Q 014225 108 LNAFNNYRACMP--WLAVPYSDLETKKALNRKFDIE-GIP---------------CLVVLQPYDDKDDATLH 161 (428)
Q Consensus 108 ~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~~~v~-~~P---------------~~~lid~~~~dG~i~~~ 161 (428)
.+.+++|+++++ |..++. +.+....+++.|++. ..| +++|||+ +|+++..
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~-~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~---~G~i~~~ 160 (200)
T 2b7k_A 93 PAVLKEYLSDFHPSILGLTG-TFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDP---EGQFVDA 160 (200)
T ss_dssp HHHHHHHHTTSCTTCEEEEC-CHHHHHHHHHHTTC--------------CTTTCCCEEEECT---TSCEEEE
T ss_pred HHHHHHHHHHcCCCceEEeC-CHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECC---CCcEEEE
Confidence 788899998765 544544 444447899999986 344 8899999 9999865
No 175
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.75 E-value=1e-18 Score=156.37 Aligned_cols=119 Identities=11% Similarity=0.135 Sum_probs=95.5
Q ss_pred ccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC-------ChH
Q 014225 38 LASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE-------DLN 109 (428)
Q Consensus 38 ~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~-------~~~ 109 (428)
.+..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|++++++|++++ +++++|++|. +.+
T Consensus 24 ~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~--v~vv~vs~d~~~~~~~~~~~ 101 (190)
T 2vup_A 24 AASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQG--FTVLAFPCNQFGGQEPGNEE 101 (190)
T ss_dssp CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--CEEEEEECCCSTTCCCSCHH
T ss_pred CCCcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCC--eEEEEEEcCccCCCCCCCHH
Confidence 47889999 9999999999999999999999999999999999999999999999887 9999999984 667
Q ss_pred HHHHHH-hcCC--CceeccCChHH------HHHH-HhhcCCCCCc------eEEEEcCCCCCCCcccc
Q 014225 110 AFNNYR-ACMP--WLAVPYSDLET------KKAL-NRKFDIEGIP------CLVVLQPYDDKDDATLH 161 (428)
Q Consensus 110 ~~~~~~-~~~~--~~~~~~~d~~~------~~~l-~~~~~v~~~P------~~~lid~~~~dG~i~~~ 161 (428)
.+++|+ ++++ |..+...|.+. ...+ .+.|++.++| +++|||+ +|+++..
T Consensus 102 ~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~---~G~i~~~ 166 (190)
T 2vup_A 102 EIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDR---DGVPVER 166 (190)
T ss_dssp HHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECT---TSCEEEE
T ss_pred HHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECC---CCcEEEE
Confidence 788888 6544 32221112110 0111 2347888899 9999999 9999865
No 176
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.75 E-value=3.4e-18 Score=154.88 Aligned_cols=119 Identities=18% Similarity=0.242 Sum_probs=104.1
Q ss_pred hhccCCCCcc----c-CCCCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 014225 201 LLTNHDRGYL----L-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 274 (428)
Q Consensus 201 ~~g~~~p~f~----l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~i 274 (428)
.+|+++|+|+ + |.+|+ +++|++++||+|||+|| +.|||.|..++..|++++.+|++. +++|++|
T Consensus 27 ~vG~~APdF~~~a~l~d~~g~-~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~---------g~~vigi 96 (219)
T 3tue_A 27 KINSPAPSFEEVALMPNGSFK-KISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL---------NCEVLAC 96 (219)
T ss_dssp CTTSBCCCCEEEEECTTSCEE-EEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT---------TEEEEEE
T ss_pred ccCCcCCCCcccccccCCCCc-EEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccC---------CcEEEEe
Confidence 5899999998 6 78888 99999999999999999 789999999999999999999987 8999999
Q ss_pred EcCCCHHHHHHHHhcC------CccccccCCcchhHHHHhcCcC------ccceEEEECCCCcEEecc
Q 014225 275 STDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 275 s~d~~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~ 330 (428)
|+| +.....+|..+. ..++||++.|.+.++++.||+- ....+||||++|+|+...
T Consensus 97 S~D-s~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~ 163 (219)
T 3tue_A 97 SID-SEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQIT 163 (219)
T ss_dssp ESS-CHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred eCC-chhhHHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEE
Confidence 999 556666666542 2478999999999999999982 345899999999998874
No 177
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.75 E-value=2.3e-18 Score=157.06 Aligned_cols=117 Identities=12% Similarity=0.179 Sum_probs=100.4
Q ss_pred cccccccCc-cccC--CC--CEEecccC-CCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChH
Q 014225 37 LLASKDRDY-LLNQ--HG--TQVKVSDL-EGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLN 109 (428)
Q Consensus 37 ~~g~~~pdf-l~~~--~G--~~v~l~~~-~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~ 109 (428)
.+|..+|+| |.+. +| ++++++++ +||+++|+|| ++||++|+.++|.|++++++|++.+ +++|+|++|. .+
T Consensus 22 ~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Is~D~-~~ 98 (213)
T 2i81_A 22 YVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERN--VELLGCSVDS-KY 98 (213)
T ss_dssp CBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTT--EEEEEEESSC-HH
T ss_pred cCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEeCCC-HH
Confidence 579999999 9998 89 89999999 9999999999 9999999999999999999999876 9999999984 55
Q ss_pred HHHHHHhcC-------CCceec-cCChHHHHHHHhhcCCC-----CCceEEEEcCCCCCCCccccc
Q 014225 110 AFNNYRACM-------PWLAVP-YSDLETKKALNRKFDIE-----GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 110 ~~~~~~~~~-------~~~~~~-~~d~~~~~~l~~~~~v~-----~~P~~~lid~~~~dG~i~~~~ 162 (428)
..++|++.+ ++ .+| +.|.+ ..+++.|++. .+|+++|||+ +|+++...
T Consensus 99 ~~~~~~~~~~~~~g~~~~-~fp~l~D~~--~~~~~~ygv~~~~g~~~p~~~lID~---~G~i~~~~ 158 (213)
T 2i81_A 99 THLAWKKTPLAKGGIGNI-KHTLLSDIT--KSISKDYNVLFDDSVSLRAFVLIDM---NGIVQHLL 158 (213)
T ss_dssp HHHHHHSSCGGGTCCCSC-SSEEEECTT--SHHHHHTTCEETTTEECEEEEEECT---TSBEEEEE
T ss_pred HHHHHHHHHHhhCCccCC-CceEEECCc--hHHHHHhCCccccCCcccEEEEECC---CCEEEEEE
Confidence 678888765 32 222 22433 7899999999 8999999999 99998774
No 178
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=8.4e-20 Score=158.22 Aligned_cols=117 Identities=21% Similarity=0.299 Sum_probs=100.6
Q ss_pred ccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHH-HHHHHh-cCCCcEEEEEEecCCChHHHHHH
Q 014225 38 LASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVD-VYEELR-NNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 38 ~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~-l~~~~~-~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
+|..+|+| |.+.+|+++++++++||+++|+||++||++|+.++|.|++ ++++++ +.+ +.+++|++|.+.+.+++|
T Consensus 9 ~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~--~~vv~v~~d~~~~~~~~~ 86 (159)
T 2ls5_A 9 IGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNAD--FALIGIDRDEPLEKVLAF 86 (159)
Confidence 68899999 9999999999999999999999999999999999999998 999987 544 999999999887788889
Q ss_pred HhcCCCceeccCChHHHHHHHhhcC--CCCCceEEEEcCCCCCCCcccc
Q 014225 115 RACMPWLAVPYSDLETKKALNRKFD--IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 115 ~~~~~~~~~~~~d~~~~~~l~~~~~--v~~~P~~~lid~~~~dG~i~~~ 161 (428)
.+++++....+.|.+ ..+.+.|+ +.++|+++|||+ +|+++..
T Consensus 87 ~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~P~~~lid~---~G~i~~~ 130 (159)
T 2ls5_A 87 AKSTGVTYPLGLDPG--ADIFAKYALRDAGITRNVLIDR---EGKIVKL 130 (159)
Confidence 888775322222333 78999999 566999999999 9998865
No 179
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.75 E-value=2.2e-18 Score=155.69 Aligned_cols=118 Identities=19% Similarity=0.229 Sum_probs=99.7
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
.+|+.+||| |.+.+|++++|++++||+++|+|| ++||++|+.++|.|++++++| .+ +++++|+.| +.+..++|
T Consensus 53 ~~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~--v~vv~Is~D-~~~~~~~~ 127 (200)
T 3zrd_A 53 QIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--EN--TVVLCISSD-LPFAQSRF 127 (200)
T ss_dssp CTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TT--EEEEEEESS-CHHHHTTC
T ss_pred CCCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CC--CEEEEEECC-CHHHHHHH
Confidence 479999999 999999999999999999999999 789999999999999999999 44 999999998 45668888
Q ss_pred HhcCCC-ceeccCChHHHHHHHhhcCCC---------CCceEEEEcCCCCCCCcccccc
Q 014225 115 RACMPW-LAVPYSDLETKKALNRKFDIE---------GIPCLVVLQPYDDKDDATLHDG 163 (428)
Q Consensus 115 ~~~~~~-~~~~~~d~~~~~~l~~~~~v~---------~~P~~~lid~~~~dG~i~~~~~ 163 (428)
.+++++ ....+.|.. ...+.+.|++. .+|+++|||+ +|+|+....
T Consensus 128 ~~~~~~~~f~~l~D~~-~~~~~~~ygv~~~~~~~~g~~~p~~~lID~---~G~I~~~~~ 182 (200)
T 3zrd_A 128 CGAEGLSNVITLSTLR-GADFKQAYGVAITEGPLAGLTARAVVVLDG---QDNVIYSEL 182 (200)
T ss_dssp TTTTTCTTEEEEETTS-CTHHHHHTTCEECSSTTTTSBCCEEEEECT---TSBEEEEEE
T ss_pred HHHcCCCCceEEecCc-hHHHHHHhCceeecccCCCccccEEEEECC---CCeEEEEEe
Confidence 888765 333333441 27899999985 3699999999 999987643
No 180
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.75 E-value=2.2e-18 Score=158.21 Aligned_cols=116 Identities=14% Similarity=0.210 Sum_probs=96.4
Q ss_pred cccccccCc-cccC---CCCEEecccCCCCEEEEEEec-CCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 37 LLASKDRDY-LLNQ---HGTQVKVSDLEGKVTALYFSA-NWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 37 ~~g~~~pdf-l~~~---~G~~v~l~~~~gk~vlv~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
.+|..+|+| |.+. +|+++++++++||++||+||+ +||++|+.++|.|++++++|++.+ ++||+|++|.. +..
T Consensus 41 ~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~--v~vv~Is~D~~-~~~ 117 (222)
T 3ztl_A 41 LPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRN--CQVIACSTDSQ-YSH 117 (222)
T ss_dssp CSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCH-HHH
T ss_pred cCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEECCCH-HHH
Confidence 579999999 8844 559999999999999999996 999999999999999999999877 99999999863 345
Q ss_pred HHHHhcC---------CCceeccCChHHHHHHHhhcCCC------CCceEEEEcCCCCCCCccccc
Q 014225 112 NNYRACM---------PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 112 ~~~~~~~---------~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lid~~~~dG~i~~~~ 162 (428)
.++.+.+ +|..+ .|.+ ..+.+.|++. .+|+++|||+ +|+|+...
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~l--~D~~--~~~~~~ygv~~~~~g~~~P~~~lID~---~G~I~~~~ 176 (222)
T 3ztl_A 118 LAWDNLDRKSGGLGHMKIPLL--ADRK--QEISKAYGVFDEEDGNAFRGLFIIDP---NGILRQIT 176 (222)
T ss_dssp HHHHHSCGGGTSCCSCSSCEE--ECSS--SHHHHHTTCBCTTTSSBCEEEEEECT---TSEEEEEE
T ss_pred HHHHHHhhhhccccccceeEE--eCCc--hHHHHHcCCeecCCCCccceEEEECC---CCeEEEEE
Confidence 6666643 23222 2333 6899999998 8999999999 99998764
No 181
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.75 E-value=2.1e-18 Score=157.11 Aligned_cols=117 Identities=19% Similarity=0.231 Sum_probs=97.8
Q ss_pred cccccccCc-cccC---CCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 37 LLASKDRDY-LLNQ---HGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 37 ~~g~~~pdf-l~~~---~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
.+|..+|+| |.+. +|+++++++++||+++|+|| ++||++|+.++|.|++++++|++.+ +++|+|++|. .+..
T Consensus 20 ~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~--v~vv~Is~D~-~~~~ 96 (211)
T 2pn8_A 20 FQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSIN--TEVVACSVDS-QFTH 96 (211)
T ss_dssp CSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTT--EEEEEEESSC-HHHH
T ss_pred CCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCC-HHHH
Confidence 468999999 8764 56899999999999999999 9999999999999999999999876 9999999975 4557
Q ss_pred HHHHhcC-------CCceec-cCChHHHHHHHhhcCCC------CCceEEEEcCCCCCCCccccc
Q 014225 112 NNYRACM-------PWLAVP-YSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 112 ~~~~~~~-------~~~~~~-~~d~~~~~~l~~~~~v~------~~P~~~lid~~~~dG~i~~~~ 162 (428)
++|++++ ++ .+| +.|.+ ..+++.|++. .+|+++|||+ +|+|+...
T Consensus 97 ~~~~~~~~~~~g~~~~-~fp~l~D~~--~~~~~~ygv~~~~~g~~~p~~~lID~---~G~I~~~~ 155 (211)
T 2pn8_A 97 LAWINTPRRQGGLGPI-RIPLLSDLT--HQISKDYGVYLEDSGHTLRGLFIIDD---KGILRQIT 155 (211)
T ss_dssp HHHHTSCGGGTCCCSC-SSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEE
T ss_pred HHHHHHhhhccCccCC-ceEEEECCc--hHHHHHcCCcccCCCcccceEEEECC---CCEEEEEE
Confidence 7888766 32 222 22433 6899999994 6999999999 99998764
No 182
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.74 E-value=3.4e-18 Score=154.53 Aligned_cols=117 Identities=18% Similarity=0.273 Sum_probs=99.2
Q ss_pred cccccccCc-cccC--CC--CEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHH
Q 014225 37 LLASKDRDY-LLNQ--HG--TQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNA 110 (428)
Q Consensus 37 ~~g~~~pdf-l~~~--~G--~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~ 110 (428)
.+|..+|+| |.+. +| +++++++++||+++|+|| ++||++|+.++|.|++++++|++.+ +++++|+.|. .+.
T Consensus 7 ~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~--v~vi~Is~D~-~~~ 83 (202)
T 1uul_A 7 EDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIG--CEVLACSMDS-EYS 83 (202)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTT--EEEEEEESSC-HHH
T ss_pred cCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEEeCCC-HHH
Confidence 468999999 8887 78 899999999999999999 9999999999999999999999876 9999999985 456
Q ss_pred HHHHHhcC-------CCceec-cCChHHHHHHHhhcCCC------CCceEEEEcCCCCCCCccccc
Q 014225 111 FNNYRACM-------PWLAVP-YSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 111 ~~~~~~~~-------~~~~~~-~~d~~~~~~l~~~~~v~------~~P~~~lid~~~~dG~i~~~~ 162 (428)
.++|++++ ++ .+| +.|.+ ..+++.|++. .+|+++|||+ +|+++...
T Consensus 84 ~~~~~~~~~~~~~~~~~-~~p~l~D~~--~~~~~~ygv~~~~~g~~~P~~~lid~---~G~i~~~~ 143 (202)
T 1uul_A 84 HLAWTSIERKRGGLGQM-NIPILADKT--KCIMKSYGVLKEEDGVAYRGLFIIDP---KQNLRQIT 143 (202)
T ss_dssp HHHHHHSCGGGTCCCSC-SSCEEECTT--CHHHHHHTCEETTTTEECEEEEEECT---TSBEEEEE
T ss_pred HHHHHHHHHhhCCCCCC-ceeEEECCc--hHHHHHcCCccCCCCceeeEEEEECC---CCEEEEEE
Confidence 78888765 22 222 22332 6899999998 9999999999 99998763
No 183
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.74 E-value=4e-18 Score=153.45 Aligned_cols=116 Identities=21% Similarity=0.296 Sum_probs=98.1
Q ss_pred cccccccCc-cccC-CC--CEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 37 LLASKDRDY-LLNQ-HG--TQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 37 ~~g~~~pdf-l~~~-~G--~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
.+|..+|+| |.+. +| +++++++++||+++|+|| ++||++|+.++|.|++++++|++.+ +++++|++|.. +..
T Consensus 6 ~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Is~d~~-~~~ 82 (197)
T 1qmv_A 6 RIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLG--CEVLGVSVDSQ-FTH 82 (197)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCH-HHH
T ss_pred cCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCCH-HHH
Confidence 368999999 9887 88 999999999999999999 9999999999999999999999876 99999999864 456
Q ss_pred HHHHhcC-------CCceec-cCChHHHHHHHhhcCCC------CCceEEEEcCCCCCCCcccc
Q 014225 112 NNYRACM-------PWLAVP-YSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 112 ~~~~~~~-------~~~~~~-~~d~~~~~~l~~~~~v~------~~P~~~lid~~~~dG~i~~~ 161 (428)
.++++++ ++ .+| ..|.+ ..+++.|++. .+|+++|||+ +|+++..
T Consensus 83 ~~~~~~~~~~~~~~~~-~~p~l~D~~--~~~~~~~gv~~~~~~~~~P~~~lid~---~G~i~~~ 140 (197)
T 1qmv_A 83 LAWINTPRKEGGLGPL-NIPLLADVT--RRLSEDYGVLKTDEGIAYRGLFIIDG---KGVLRQI 140 (197)
T ss_dssp HHHHTSCGGGTCCCSC-SSCEEECTT--CHHHHHTTCEETTTTEECEEEEEECT---TSBEEEE
T ss_pred HHHHHHHHhhCCCCCC-ceEEEECCc--HHHHHHcCCccCCCCceeeEEEEECC---CCcEEEE
Confidence 7777754 32 222 22333 6899999998 8999999999 9999876
No 184
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.74 E-value=1.9e-17 Score=150.97 Aligned_cols=76 Identities=17% Similarity=0.095 Sum_probs=69.2
Q ss_pred ccccccCc-cccCC-CCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC-------Ch
Q 014225 38 LASKDRDY-LLNQH-GTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE-------DL 108 (428)
Q Consensus 38 ~g~~~pdf-l~~~~-G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~-------~~ 108 (428)
.+..+||| |.+.+ |++++|++++||+|||+|||+||++|+ ++|.|++++++|++.| ++||+|++|. +.
T Consensus 31 ~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g--~~Vlgvs~d~f~~~e~~~~ 107 (215)
T 2i3y_A 31 EKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYG--LVVLGFPCNQFGKQEPGDN 107 (215)
T ss_dssp CCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCSCH
T ss_pred ccCCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCC--eEEEEEEccccCcCCCCCH
Confidence 35679999 99999 999999999999999999999999999 9999999999999887 9999999762 45
Q ss_pred HHHHHHHh
Q 014225 109 NAFNNYRA 116 (428)
Q Consensus 109 ~~~~~~~~ 116 (428)
+..++|++
T Consensus 108 ~~i~~f~~ 115 (215)
T 2i3y_A 108 KEILPGLK 115 (215)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67888988
No 185
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.74 E-value=2.1e-18 Score=150.82 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=97.8
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
.+|..+|+| |.+.+|+++++++++||+++|+|| ++||++|+.++|.|++++++ .+ +++++|+.|. .+..++|
T Consensus 21 ~~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~--~~vv~is~d~-~~~~~~~ 94 (166)
T 3p7x_A 21 NEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EE--GIVLTISADL-PFAQKRW 94 (166)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TT--SEEEEEESSC-HHHHHHH
T ss_pred CCCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CC--CEEEEEECCC-HHHHHHH
Confidence 469999999 999999999999999999999999 88999999999999999888 44 9999999874 5668888
Q ss_pred HhcCCCceec-cCCh-HHHHHHHhhcCCCC------CceEEEEcCCCCCCCcccccc
Q 014225 115 RACMPWLAVP-YSDL-ETKKALNRKFDIEG------IPCLVVLQPYDDKDDATLHDG 163 (428)
Q Consensus 115 ~~~~~~~~~~-~~d~-~~~~~l~~~~~v~~------~P~~~lid~~~~dG~i~~~~~ 163 (428)
.+++++..++ +.|. + ..+.+.|++.. +|+++|||+ +|+|+....
T Consensus 95 ~~~~~~~~~~~l~D~~~--~~~~~~~gv~~~~~g~~~p~~~liD~---~G~i~~~~~ 146 (166)
T 3p7x_A 95 CASAGLDNVITLSDHRD--LSFGENYGVVMEELRLLARAVFVLDA---DNKVVYKEI 146 (166)
T ss_dssp HHHHTCSSCEEEECTTT--CHHHHHHTCEETTTTEECCEEEEECT---TCBEEEEEE
T ss_pred HHHcCCCceEEccCCch--hHHHHHhCCccccCCceeeEEEEECC---CCeEEEEEE
Confidence 8876651222 2344 3 68999999975 899999999 999987643
No 186
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.74 E-value=3.1e-18 Score=148.62 Aligned_cols=116 Identities=14% Similarity=0.203 Sum_probs=97.6
Q ss_pred cccccccCc-cccCCCCEEecccCCCC--EEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGK--VTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFN 112 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk--~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~ 112 (428)
.+|+.+|+| |.+.+|+++++++++|| +++|+|| ++||++|+.++|.|++++++|++++ ++++|+.| +.+..+
T Consensus 8 ~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~---~vv~is~d-~~~~~~ 83 (159)
T 2a4v_A 8 EIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA---AVFGLSAD-SVTSQK 83 (159)
T ss_dssp CTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC---EEEEEESC-CHHHHH
T ss_pred CCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC---cEEEEeCC-CHHHHH
Confidence 468999999 99999999999999987 8999997 9999999999999999999998874 89999998 456688
Q ss_pred HHHhcCCCceeccCChHHHHHHHhhcCCCCCc------eEEEEcCCCCCCCccccc
Q 014225 113 NYRACMPWLAVPYSDLETKKALNRKFDIEGIP------CLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 113 ~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P------~~~lid~~~~dG~i~~~~ 162 (428)
+|.+++++....+.|.+ ..+.+.|++..+| +++|| + +|+++...
T Consensus 84 ~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~p~~g~~~~~~li-~---~G~i~~~~ 133 (159)
T 2a4v_A 84 KFQSKQNLPYHLLSDPK--REFIGLLGAKKTPLSGSIRSHFIF-V---DGKLKFKR 133 (159)
T ss_dssp HHHHHHTCSSEEEECTT--CHHHHHHTCBSSSSSCBCCEEEEE-E---TTEEEEEE
T ss_pred HHHHHhCCCceEEECCc--cHHHHHhCCcccccCCccceEEEE-c---CCEEEEEE
Confidence 88887664222222433 6889999999888 88999 9 99998663
No 187
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.74 E-value=9.6e-17 Score=164.05 Aligned_cols=92 Identities=21% Similarity=0.412 Sum_probs=69.9
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.||+|+|+|||+||++|+++.|.|.++++.+++. .++.++.|+++.+ +
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~--------~~v~~~~id~~~~------------------------~ 416 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKD--------PNIVIAKMDATAN------------------------D 416 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTC--------SSEEEEEEETTSS------------------------C
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccC--------CCEEEEEEECCch------------------------h
Confidence 3789999999999999999999999999998753 2577777776632 3
Q ss_pred HHHhcCcCccceEEEECCCCc--EEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGK--TVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~--i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
++..|+|.++||+++++++|+ ++...|. ...+.|.+.|++.+..
T Consensus 417 ~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~---------------~~~~~l~~~l~~~~~~ 462 (481)
T 3f8u_A 417 VPSPYEVRGFPTIYFSPANKKLNPKKYEGG---------------RELSDFISYLQREATN 462 (481)
T ss_dssp CCTTCCCCSSSEEEEECTTCTTSCEECCSC---------------CSHHHHHHHHHHHCSS
T ss_pred hHhhCCCcccCEEEEEeCCCeEeeeEeCCC---------------CCHHHHHHHHHHhcCC
Confidence 567899999999999988876 3333221 1246677777776554
No 188
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.74 E-value=4.1e-18 Score=158.39 Aligned_cols=139 Identities=9% Similarity=0.083 Sum_probs=109.1
Q ss_pred hhccCCCCccc-CCCCCceecc-ccc--CCcEE-EEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 201 LLTNHDRGYLL-GHPPDEKVPV-SSL--VGKTV-GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g~~~v~l-~~~--~gk~v-ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
.+|.++|+|++ +.+| .+++ +++ +||++ |++||++||++|..+++.|.+++++|+++ +++||+||
T Consensus 6 ~iG~~aPdF~l~~~~G--~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~---------gv~VI~VS 74 (249)
T 3a2v_A 6 LIGERFPEMEVTTDHG--VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL---------GVDLIGLS 74 (249)
T ss_dssp CTTSBCCCEEEEETTE--EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT---------TEEEEEEE
T ss_pred CCCCCCCCeEEEcCCC--CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC---------CcEEEEEE
Confidence 46999999999 8777 6999 999 99964 55788999999999999999999999977 89999999
Q ss_pred cCCCHHHHHHHHh---cC--CccccccCCcchhHHHHhcCcC-------ccceEEEECCCCcEEeccccchhhcccccCC
Q 014225 276 TDRDQTSFESYFG---TM--PWLALPFGDPTIKELTKYFDVQ-------GIPCLVIIGPEGKTVTKQGRNLINLYQENAY 343 (428)
Q Consensus 276 ~d~~~~~~~~~~~---~~--~~~~~~~~~d~~~~~~~~~~v~-------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~ 343 (428)
+|. .....+|.. .. ..++||+..|....+++.||+. .+|++||||++|+|+....+.+ .
T Consensus 75 ~Ds-~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~-------~- 145 (249)
T 3a2v_A 75 VDS-VFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPM-------E- 145 (249)
T ss_dssp SSC-HHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECT-------T-
T ss_pred CCC-HHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCC-------c-
Confidence 985 333333333 21 1478899999899999999997 8999999999999999853322 1
Q ss_pred CCChHHHHHHHHHHHHHH
Q 014225 344 PFTEAKLEFLEKQMEEEA 361 (428)
Q Consensus 344 p~~~~~~~~L~~~l~~~~ 361 (428)
.....++|.+.|+++.
T Consensus 146 --~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 146 --LGRLVDEILRIVKALK 161 (249)
T ss_dssp --BCCCHHHHHHHHHHHH
T ss_pred --ccchhHHHHHHHHHHH
Confidence 1122466666666654
No 189
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.74 E-value=2.7e-18 Score=150.06 Aligned_cols=117 Identities=17% Similarity=0.192 Sum_probs=98.5
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCC-ChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANW-YPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~w-C~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
.+|..+|+| |.+.+|+++++++++||+++|+||++| |++|+.++|.|++++++| .+ +++++|+.|. .+..++|
T Consensus 19 ~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~--~~vv~is~d~-~~~~~~~ 93 (167)
T 2jsy_A 19 KVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GD--VNVYTISADL-PFAQARW 93 (167)
T ss_dssp CTTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SS--CEEEEEECSS-GGGTSCC
T ss_pred CCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CC--CEEEEEECCC-HHHHHHH
Confidence 468999999 999999999999999999999999999 999999999999999999 34 9999999984 4557888
Q ss_pred HhcCCCceec-cCChHHHHHHHhhcCCCC------CceEEEEcCCCCCCCccccc
Q 014225 115 RACMPWLAVP-YSDLETKKALNRKFDIEG------IPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 115 ~~~~~~~~~~-~~d~~~~~~l~~~~~v~~------~P~~~lid~~~~dG~i~~~~ 162 (428)
.+++++..+| +.|. ....+.+.|++.. +|+++|||+ +|+++...
T Consensus 94 ~~~~~~~~~~~~~d~-~~~~~~~~~~v~~~~~g~~~p~~~lid~---~G~i~~~~ 144 (167)
T 2jsy_A 94 CGANGIDKVETLSDH-RDMSFGEAFGVYIKELRLLARSVFVLDE---NGKVVYAE 144 (167)
T ss_dssp GGGSSCTTEEEEEGG-GTCHHHHHTTCBBTTTCSBCCEEEEECT---TSCEEEEE
T ss_pred HHhcCCCCceEeeCC-chhHHHHHhCCccccCCceeeEEEEEcC---CCcEEEEE
Confidence 8887762233 2231 2268889999986 499999999 99998774
No 190
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.74 E-value=4.8e-17 Score=147.52 Aligned_cols=76 Identities=13% Similarity=0.067 Sum_probs=68.0
Q ss_pred ccccccCc-cccCC-CCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC-------CCh
Q 014225 38 LASKDRDY-LLNQH-GTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-------EDL 108 (428)
Q Consensus 38 ~g~~~pdf-l~~~~-G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D-------~~~ 108 (428)
....+|+| |.+.+ |++++|++++||+|||+|||+||++| .++|.|++++++|++.| ++||+|++| .+.
T Consensus 13 ~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g--~~vlgvs~d~f~~~e~~~~ 89 (207)
T 2r37_A 13 ISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFG--LVILGFPCNQFGKQEPGEN 89 (207)
T ss_dssp --CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGT--EEEEEEECCCBTTCCCSCH
T ss_pred ccCccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCC--EEEEEEECcccCcCCCCCH
Confidence 35679999 99999 99999999999999999999999999 79999999999999987 999999976 245
Q ss_pred HHHHHHHh
Q 014225 109 NAFNNYRA 116 (428)
Q Consensus 109 ~~~~~~~~ 116 (428)
+..++|++
T Consensus 90 ~~i~~f~~ 97 (207)
T 2r37_A 90 SEILPTLK 97 (207)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67888988
No 191
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.73 E-value=8e-18 Score=156.25 Aligned_cols=118 Identities=18% Similarity=0.206 Sum_probs=97.3
Q ss_pred cccccccCc-ccc---CCCCEEecccCCCCEEEEEEec-CCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 37 LLASKDRDY-LLN---QHGTQVKVSDLEGKVTALYFSA-NWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 37 ~~g~~~pdf-l~~---~~G~~v~l~~~~gk~vlv~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
.+|..+||| |.+ .+|++++|++++||+++|+||+ +||++|+.++|.|++++++|++.| ++||+|+.|.. +..
T Consensus 49 ~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~g--v~vv~Is~D~~-~~~ 125 (240)
T 3qpm_A 49 KISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAIN--TEVVACSVDSQ-FTH 125 (240)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTT--EEEEEEESSCH-HHH
T ss_pred CCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEECCCH-HHH
Confidence 579999999 774 4466999999999999999999 999999999999999999999887 99999999864 456
Q ss_pred HHHHhcC-------CCceeccCChHHHHHHHhhcCCC------CCceEEEEcCCCCCCCccccc
Q 014225 112 NNYRACM-------PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 112 ~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lid~~~~dG~i~~~~ 162 (428)
++|++.+ ++.+..+.|.+ ..+.+.|++. .+|+++|||+ +|+|+...
T Consensus 126 ~~~~~~~~~~~~~~~~~fp~l~D~~--~~v~~~ygv~~~~~g~~~p~~flID~---~G~I~~~~ 184 (240)
T 3qpm_A 126 LAWIITPRKQGGLGPMKIPLLSDLT--HQISKDYGVYLEDQGHTLRGLFIIDE---KGVLRQIT 184 (240)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEE
T ss_pred HHHHHHHHhhcCCCCCceeEEeCch--HHHHHHhCCccccCCCccceEEEEcC---CCeEEEEE
Confidence 6777654 22211222443 7899999997 6899999999 99998763
No 192
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.73 E-value=8e-18 Score=146.66 Aligned_cols=117 Identities=15% Similarity=0.255 Sum_probs=99.2
Q ss_pred cccccccCc-cc--cCCC--CEEeccc-CCCCEEEEEEe-cCCChhhh-hhHHHHHHHHHHHhcCCCcEE-EEEEecCCC
Q 014225 37 LLASKDRDY-LL--NQHG--TQVKVSD-LEGKVTALYFS-ANWYPPCG-NFTGVLVDVYEELRNNGSDFE-VVFVSSDED 107 (428)
Q Consensus 37 ~~g~~~pdf-l~--~~~G--~~v~l~~-~~gk~vlv~F~-a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~-ii~vs~D~~ 107 (428)
.+|+.+|+| |. +.+| +++++++ ++||+++|+|| ++||++|+ .++|.|++++++|++.| ++ +++||.|.
T Consensus 5 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~--v~~vv~Is~d~- 81 (162)
T 1tp9_A 5 AVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG--VTEILCISVND- 81 (162)
T ss_dssp CTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCCEEEEESSC-
T ss_pred CCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEECCC-
Confidence 368999999 75 8999 9999999 89999999999 89999999 99999999999999877 99 99999984
Q ss_pred hHHHHHHHhcCCCc-eec-cCChHHHHHHHhhcCCC-----------CCceEEEEcCCCCCCCccccc
Q 014225 108 LNAFNNYRACMPWL-AVP-YSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 108 ~~~~~~~~~~~~~~-~~~-~~d~~~~~~l~~~~~v~-----------~~P~~~lid~~~~dG~i~~~~ 162 (428)
.+..++|.++++.. .+| ..|.+ ..+++.||+. .+|+++||| +|+|++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~p~~~vid----~G~i~~~~ 143 (162)
T 1tp9_A 82 PFVMKAWAKSYPENKHVKFLADGS--ATYTHALGLELDLQEKGLGTRSRRFALLVD----DLKVKAAN 143 (162)
T ss_dssp HHHHHHHHHTCTTCSSEEEEECTT--SHHHHHTTCEEEETTTTSEEEECCEEEEEE----TTEEEEEE
T ss_pred HHHHHHHHHhcCCCCCeEEEECCC--chHHHHcCcccccccCCCCccceeEEEEEE----CCEEEEEE
Confidence 56788999887752 233 33544 7899999986 389999998 79998764
No 193
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.73 E-value=9.6e-18 Score=153.74 Aligned_cols=117 Identities=18% Similarity=0.249 Sum_probs=98.5
Q ss_pred cccccccCc-cc---cCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 37 LLASKDRDY-LL---NQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 37 ~~g~~~pdf-l~---~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
.+|..+|+| |. +.+|+++++++++||+++|+|| ++||++|+.++|.|++++++|++.+ +++|+|+.|. .+..
T Consensus 28 ~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~--v~vv~Is~D~-~~~~ 104 (220)
T 1zye_A 28 AVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVN--CEVVAVSVDS-HFSH 104 (220)
T ss_dssp CTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTT--EEEEEEESSC-HHHH
T ss_pred cCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCC-HHHH
Confidence 479999999 76 4678999999999999999999 9999999999999999999999877 9999999985 4557
Q ss_pred HHHHhcC-------CCceec-cCChHHHHHHHhhcCCC------CCceEEEEcCCCCCCCccccc
Q 014225 112 NNYRACM-------PWLAVP-YSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 112 ~~~~~~~-------~~~~~~-~~d~~~~~~l~~~~~v~------~~P~~~lid~~~~dG~i~~~~ 162 (428)
++|++.+ ++ .+| +.|.+ ..+++.|++. .+|+++|||+ +|+++...
T Consensus 105 ~~~~~~~~~~~g~~~~-~fp~l~D~~--~~i~~~ygv~~~~~g~~~P~~~liD~---~G~I~~~~ 163 (220)
T 1zye_A 105 LAWINTPRKNGGLGHM-NIALLSDLT--KQISRDYGVLLEGPGLALRGLFIIDP---NGVIKHLS 163 (220)
T ss_dssp HHHHTSCGGGTCCCSC-SSEEEECTT--SHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEE
T ss_pred HHHHHHHHHhCCCcCC-ceEEEECCc--HHHHHHhCCeecCCCcccceEEEECC---CCEEEEEE
Confidence 7777755 22 222 22333 7899999998 9999999999 99998763
No 194
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.73 E-value=5.6e-18 Score=148.03 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=97.7
Q ss_pred cccccccCc-cccC--CCCEEecccC-CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHH
Q 014225 37 LLASKDRDY-LLNQ--HGTQVKVSDL-EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFN 112 (428)
Q Consensus 37 ~~g~~~pdf-l~~~--~G~~v~l~~~-~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~ 112 (428)
.+|..+|+| |.+. +|++++++++ +||+++|+||++||++|+.++|.|++++++ + +.+++|+.|.+.+.++
T Consensus 23 ~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~--v~vv~v~~~~~~~~~~ 96 (168)
T 2b1k_A 23 LIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----G--IRVVGMNYKDDRQKAI 96 (168)
T ss_dssp TTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----T--CCEEEEEESCCHHHHH
T ss_pred ccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----C--CEEEEEECCCChHHHH
Confidence 579999999 9998 9999999985 999999999999999999999999998875 4 8899999999999999
Q ss_pred HHHhcCCCceec-cCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 113 NYRACMPWLAVP-YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 113 ~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+|++++++.... ..+.. ..+++.|++.++|++++|++ +|+++..
T Consensus 97 ~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~ 141 (168)
T 2b1k_A 97 SWLKELGNPYALSLFDGD--GMLGLDLGVYGAPETFLIDG---NGIIRYR 141 (168)
T ss_dssp HHHHHHCCCCSEEEEETT--CHHHHHHTCCSSSEEEEECT---TSBEEEE
T ss_pred HHHHHcCCCCceeeECcc--hHHHHHcCccccCEEEEECC---CCeEEEE
Confidence 999877643221 11332 67899999999999999999 9998755
No 195
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.72 E-value=7.5e-18 Score=148.02 Aligned_cols=115 Identities=12% Similarity=0.143 Sum_probs=96.5
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
.+|..+|+| |.+.+|+++++++++||+++|+|| ++||++|+.++|.|++++++| .+ +++++|+.|. .+..++|
T Consensus 22 ~~g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~--v~vv~Is~d~-~~~~~~~ 96 (171)
T 2yzh_A 22 KVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EG--VDVTVVSMDL-PFAQKRF 96 (171)
T ss_dssp CTTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TT--EEEEEEESSC-HHHHHHH
T ss_pred CCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CC--ceEEEEeCCC-HHHHHHH
Confidence 368999999 999999999999999999999999 899999999999999999999 44 9999999985 5568888
Q ss_pred HhcCCC-ceeccCC-hHHHHHHHhhcCCC---------CCceEEEEcCCCCCCCccccc
Q 014225 115 RACMPW-LAVPYSD-LETKKALNRKFDIE---------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 115 ~~~~~~-~~~~~~d-~~~~~~l~~~~~v~---------~~P~~~lid~~~~dG~i~~~~ 162 (428)
.+++++ ....+.| .+ ..+ +.|++. .+|+++|||+ +|+++...
T Consensus 97 ~~~~~~~~~~~l~D~~~--~~~-~~~gv~~~~~~~~g~~~p~~~liD~---~G~i~~~~ 149 (171)
T 2yzh_A 97 CESFNIQNVTVASDFRY--RDM-EKYGVLIGEGALKGILARAVFIIDK---EGKVAYVQ 149 (171)
T ss_dssp HHHTTCCSSEEEECTTT--CGG-GGGTCBBCSSTTTTSBCCEEEEECT---TSBEEEEE
T ss_pred HHHcCCCCeEEeecCcc--CcH-HHhCCEecccccCCceeeEEEEEcC---CCeEEEEE
Confidence 888765 2222234 33 567 999985 2699999999 99998764
No 196
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.72 E-value=4e-18 Score=148.04 Aligned_cols=110 Identities=15% Similarity=0.239 Sum_probs=93.5
Q ss_pred cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC-----CChHHHHHHHhcCCC
Q 014225 46 LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-----EDLNAFNNYRACMPW 120 (428)
Q Consensus 46 l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D-----~~~~~~~~~~~~~~~ 120 (428)
|.+.+|+++++++++||+++|+||++||++|+.++|.|++++++|+..+ +.+++|++| .+.+.+.++++.+++
T Consensus 23 l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 100 (164)
T 2h30_A 23 MKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSS--ANLITVASPGFLHEKKDGEFQKWYAGLNY 100 (164)
T ss_dssp CEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTT--SEEEEEECTTSTTCCCTTHHHHHHTTSCC
T ss_pred cCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCC--cEEEEEEcCCCccccCHHHHHHHHHhCCC
Confidence 7889999999999999999999999999999999999999999998877 999999985 345678888887766
Q ss_pred ceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 121 LAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 121 ~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..++. +.+....+++.|++.++|+++|||+ +|+++..
T Consensus 101 ~~~~~-~~d~~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 137 (164)
T 2h30_A 101 PKLPV-VTDNGGTIAQNLNISVYPSWALIGK---DGDVQRI 137 (164)
T ss_dssp TTSCE-EECTTCHHHHHTTCCSSSEEEEECT---TSCEEEE
T ss_pred CcceE-EEcCchHHHHHcCCCccceEEEECC---CCcEEEE
Confidence 43332 1122268999999999999999999 9988764
No 197
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.72 E-value=6.7e-18 Score=145.26 Aligned_cols=115 Identities=15% Similarity=0.240 Sum_probs=96.6
Q ss_pred cccccccCc-cccCCC--------CEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCC
Q 014225 37 LLASKDRDY-LLNQHG--------TQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDED 107 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G--------~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~ 107 (428)
.+|..+|+| +.+.+| +.+++++++||+++|+||++||++|+.++|.|++++++ . ++.+++|++|.+
T Consensus 9 ~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~--~v~~v~v~~~~~ 83 (156)
T 1kng_A 9 LIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---K--RFQLVGINYKDA 83 (156)
T ss_dssp ---CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---T--TSEEEEEEESCC
T ss_pred HhCCCCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---C--CeEEEEEECCCC
Confidence 568999999 999999 99999999999999999999999999999999998876 2 399999999999
Q ss_pred hHHHHHHHhcCCCcee-ccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 108 LNAFNNYRACMPWLAV-PYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 108 ~~~~~~~~~~~~~~~~-~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
.+.++++++++++... ...+.. ..+++.|++.++|++++||+ +|+++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~~id~---~G~i~~~ 133 (156)
T 1kng_A 84 ADNARRFLGRYGNPFGRVGVDAN--GRASIEWGVYGVPETFVVGR---EGTIVYK 133 (156)
T ss_dssp HHHHHHHHHHHCCCCSEEEEETT--SHHHHHTTCCSSCEEEEECT---TSBEEEE
T ss_pred HHHHHHHHHHcCCCCceeeeCch--hHHHHhcCcCccCeEEEEcC---CCCEEEE
Confidence 9999999988764221 111322 68999999999999999999 9988764
No 198
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.71 E-value=1.4e-17 Score=146.90 Aligned_cols=115 Identities=15% Similarity=0.174 Sum_probs=93.4
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCC-ChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANW-YPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNY 114 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~w-C~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~ 114 (428)
.+|..+|+| |.+.+|+++++++++||+++|+||++| |++|+.++|.|++++++ .+ +++|+|+.|. .+..++|
T Consensus 19 ~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~--v~vv~Is~D~-~~~~~~~ 92 (175)
T 1xvq_A 19 AVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SG--ATVLCVSKDL-PFAQKRF 92 (175)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TT--CEEEEEESSC-HHHHTTC
T ss_pred CcCCcCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cC--CEEEEEECCC-HHHHHHH
Confidence 468999999 999999999999999999999999999 99999999999999998 33 9999999975 4456888
Q ss_pred HhcCCCceec-cCChHHHHHHHhhcCCCCC---------ceEEEEcCCCCCCCccccc
Q 014225 115 RACMPWLAVP-YSDLETKKALNRKFDIEGI---------PCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 115 ~~~~~~~~~~-~~d~~~~~~l~~~~~v~~~---------P~~~lid~~~~dG~i~~~~ 162 (428)
++++++..++ +.|.+ ..+.+.|++..+ |+++|||+ +|+++...
T Consensus 93 ~~~~~~~~~~~l~D~~--~~~~~~~gv~~~~~~~~g~~~p~~~lid~---~G~I~~~~ 145 (175)
T 1xvq_A 93 CGAEGTENVMPASAFR--DSFGEDYGVTIADGPMAGLLARAIVVIGA---DGNVAYTE 145 (175)
T ss_dssp C------CEEEEECTT--SSHHHHTTCBBCSSTTTTSBCSEEEEECT---TSBEEEEE
T ss_pred HHHcCCCCceEeeCCH--HHHHHHhCCcccccccCCcccceEEEECC---CCeEEEEE
Confidence 8877652233 22433 678999999877 99999999 99998764
No 199
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.70 E-value=8.2e-18 Score=149.71 Aligned_cols=119 Identities=13% Similarity=0.208 Sum_probs=97.4
Q ss_pred ccccccccCc-cccC--CC-CEEeccc-CCCC-EEEEEEecCCChhhhh-hHHHHHHHHHHHhcCCCcEE-EEEEecCCC
Q 014225 36 SLLASKDRDY-LLNQ--HG-TQVKVSD-LEGK-VTALYFSANWYPPCGN-FTGVLVDVYEELRNNGSDFE-VVFVSSDED 107 (428)
Q Consensus 36 ~~~g~~~pdf-l~~~--~G-~~v~l~~-~~gk-~vlv~F~a~wC~~C~~-~~p~l~~l~~~~~~~~~~~~-ii~vs~D~~ 107 (428)
-.+|+.+|+| |.+. +| ++++|++ ++|| +||++||++|||+|+. ++|.|++++++|++.| ++ |++||.|.
T Consensus 26 l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~Is~d~- 102 (184)
T 3uma_A 26 IAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG--VDDIAVVAVND- 102 (184)
T ss_dssp CCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESSC-
T ss_pred CCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC-
Confidence 3579999999 9988 99 9999999 8999 5566677999999999 7999999999999988 88 99999974
Q ss_pred hHHHHHHHhcCCCc--eeccCChHHHHHHHhhcCCC-----------CCceEEEEcCCCCCCCcccccc
Q 014225 108 LNAFNNYRACMPWL--AVPYSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHDG 163 (428)
Q Consensus 108 ~~~~~~~~~~~~~~--~~~~~d~~~~~~l~~~~~v~-----------~~P~~~lid~~~~dG~i~~~~~ 163 (428)
....++|.+++++. +....|.+ ..+++.||+. ..|+++|| . +|+|++...
T Consensus 103 ~~~~~~f~~~~~~~~~fp~l~D~~--~~va~~yGv~~~~~~~g~g~~~~r~tfiI-d---dG~I~~~~~ 165 (184)
T 3uma_A 103 LHVMGAWATHSGGMGKIHFLSDWN--AAFTKAIGMEIDLSAGTLGIRSKRYSMLV-E---DGVVKALNI 165 (184)
T ss_dssp HHHHHHHHHHHTCTTTSEEEECTT--CHHHHHTTCEEEEGGGTCEEEECCEEEEE-E---TTEEEEEEE
T ss_pred HHHHHHHHHHhCCCCceEEEEcCc--hHHHHHcCCceeccccCCcccceeEEEEE-C---CCEEEEEEE
Confidence 56678888876653 22233544 7899999985 35889999 4 899987744
No 200
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.70 E-value=2.3e-17 Score=144.38 Aligned_cols=122 Identities=24% Similarity=0.355 Sum_probs=97.4
Q ss_pred ccccccccCc-cccCCCCEEecccCCCCEEEEEEecCCChh-hhhhHHHHHHHHHHHhcCC-CcEEEEEEecCC---ChH
Q 014225 36 SLLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPP-CGNFTGVLVDVYEELRNNG-SDFEVVFVSSDE---DLN 109 (428)
Q Consensus 36 ~~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~-C~~~~p~l~~l~~~~~~~~-~~~~ii~vs~D~---~~~ 109 (428)
.+.|..+|+| |.+.+| ++++++++||+++|+||++||++ |+.++|.|+++++++++.+ .++++++|++|. +.+
T Consensus 10 ~~~G~~~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~ 88 (172)
T 2k6v_A 10 RLLNPKPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPE 88 (172)
T ss_dssp EEEEEEECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHH
T ss_pred cccCCCCCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHH
Confidence 4568899999 999999 99999999999999999999997 9999999999999998641 139999999984 457
Q ss_pred HHHHHHhcCCCceeccCCh-HHHHHHHhhcCC---------------CCCceEEEEcCCCCCCCccccc
Q 014225 110 AFNNYRACMPWLAVPYSDL-ETKKALNRKFDI---------------EGIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 110 ~~~~~~~~~~~~~~~~~d~-~~~~~l~~~~~v---------------~~~P~~~lid~~~~dG~i~~~~ 162 (428)
.+++|+++++.....+.+. .....+++.|++ .++|+++||| +|+++...
T Consensus 89 ~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid----~G~i~~~~ 153 (172)
T 2k6v_A 89 VADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK----EGRLVLLY 153 (172)
T ss_dssp HHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE----TTEEEEEE
T ss_pred HHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE----CCEEEEEE
Confidence 7888988765422222232 223577777664 5789999999 79887653
No 201
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.70 E-value=2.7e-17 Score=144.85 Aligned_cols=118 Identities=15% Similarity=0.191 Sum_probs=96.4
Q ss_pred cccccccCc-cc-cCCCCEEeccc-CCCCEEE-EEEecCCChhhh-hhHHHHHHHHHHHhcCCCcEEEEE-EecCCChHH
Q 014225 37 LLASKDRDY-LL-NQHGTQVKVSD-LEGKVTA-LYFSANWYPPCG-NFTGVLVDVYEELRNNGSDFEVVF-VSSDEDLNA 110 (428)
Q Consensus 37 ~~g~~~pdf-l~-~~~G~~v~l~~-~~gk~vl-v~F~a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~ii~-vs~D~~~~~ 110 (428)
.+|..+||| |. +.+|++++|++ ++||+++ ++||++||++|+ .++|.|++++++|++.| +++|+ ||.|. ...
T Consensus 16 ~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~g--v~vv~~iS~D~-~~~ 92 (173)
T 3mng_A 16 KVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKG--VQVVACLSVND-AFV 92 (173)
T ss_dssp CTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESSC-HHH
T ss_pred CCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC--CEEEEEEcCCC-HHH
Confidence 469999999 99 99999999999 5999554 555699999999 59999999999999988 99997 88875 566
Q ss_pred HHHHHhcCCCc--eeccCChHHHHHHHhhcCCC-------------CCceEEEEcCCCCCCCcccccc
Q 014225 111 FNNYRACMPWL--AVPYSDLETKKALNRKFDIE-------------GIPCLVVLQPYDDKDDATLHDG 163 (428)
Q Consensus 111 ~~~~~~~~~~~--~~~~~d~~~~~~l~~~~~v~-------------~~P~~~lid~~~~dG~i~~~~~ 163 (428)
.++|.++++.. +...+|.+ ..+++.||+. ..|+++||| +|+|++...
T Consensus 93 ~~~f~~~~~~~~~fp~l~D~~--~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID----dG~I~~~~v 154 (173)
T 3mng_A 93 TGEWGRAHKAEGKVRLLADPT--GAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ----DGIVKALNV 154 (173)
T ss_dssp HHHHHHHTTCTTTCEEEECTT--CHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE----TTEEEEEEE
T ss_pred HHHHHHHhCCCCceEEEECCC--hHHHHHhCCCcccccccccCCcceEEEEEEEE----CCEEEEEEE
Confidence 88888887753 22233544 7899999885 459999999 799987643
No 202
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.70 E-value=2.3e-17 Score=161.10 Aligned_cols=118 Identities=14% Similarity=0.081 Sum_probs=101.0
Q ss_pred cccccccCc-c-----ccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC-----
Q 014225 37 LLASKDRDY-L-----LNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD----- 105 (428)
Q Consensus 37 ~~g~~~pdf-l-----~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D----- 105 (428)
.+|..+|+| + .+.+|+++++++++||+|||+||++||++|+.++|.|++++++|++.+ +++|+|++|
T Consensus 52 ~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~--v~vi~Vs~d~~~~~ 129 (352)
T 2hyx_A 52 ESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSG--LAVIGVHTPEYAFE 129 (352)
T ss_dssp CCCCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT--EEEEEEECCSSGGG
T ss_pred CCCCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCC--eEEEEEECCccccc
Confidence 568899999 3 478999999999999999999999999999999999999999999876 999999975
Q ss_pred CChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 106 EDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
.+.+.+++|++++++......|.+ ..+++.|++.++|+++|||+ +|+++..
T Consensus 130 d~~~~~~~~~~~~~l~fpv~~D~~--~~l~~~ygV~~~Pt~~lID~---~G~Iv~~ 180 (352)
T 2hyx_A 130 KVPGNVAKGAANLGISYPIALDNN--YATWTNYRNRYWPAEYLIDA---TGTVRHI 180 (352)
T ss_dssp GCHHHHHHHHHHHTCCSCEEECTT--SHHHHHTTCCEESEEEEECT---TSBEEEE
T ss_pred CCHHHHHHHHHHcCCCccEEeCCc--HHHHHHcCCCccCEEEEEeC---CCeEEEE
Confidence 567889999987764322222333 68899999999999999999 9999865
No 203
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.70 E-value=2.2e-17 Score=154.39 Aligned_cols=118 Identities=18% Similarity=0.201 Sum_probs=97.0
Q ss_pred cccccccCc-cc---cCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 37 LLASKDRDY-LL---NQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 37 ~~g~~~pdf-l~---~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
.+|..+||| |. +.+|++++|++++||++||+|| ++||++|..++|.|++++++|++.| ++||+|++|.. ...
T Consensus 63 ~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~g--v~vv~IS~D~~-~~~ 139 (254)
T 3tjj_A 63 KISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSIN--TEVVACSVDSQ-FTH 139 (254)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTT--EEEEEEESSCH-HHH
T ss_pred CCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEEcCCCH-HHH
Confidence 479999999 76 4467899999999999999999 9999999999999999999999887 99999999854 456
Q ss_pred HHHHhcC-------CCceeccCChHHHHHHHhhcCCC------CCceEEEEcCCCCCCCccccc
Q 014225 112 NNYRACM-------PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 112 ~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lid~~~~dG~i~~~~ 162 (428)
.++++.+ ++.+..+.|.+ ..+++.|++. .+|++||||+ +|+|+...
T Consensus 140 ~~~~~~~~~~~g~~~~~fp~l~D~~--~~va~~ygv~~~~~g~~~p~tflID~---~G~I~~~~ 198 (254)
T 3tjj_A 140 LAWINTPRRQGGLGPIRIPLLSDLT--HQISKDYGVYLEDSGHTLRGLFIIDD---KGILRQIT 198 (254)
T ss_dssp HHHHTSCGGGTSCCSCSSCEEECTT--SHHHHHHTCEETTTTEECEEEEEECT---TSBEEEEE
T ss_pred HHHHHHHHHhcCCcccccceeeCcH--HHHHHHcCCccccCCCccceEEEECC---CCeEEEEE
Confidence 6777654 22111122443 7899999985 5899999999 99998763
No 204
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.69 E-value=5e-17 Score=157.18 Aligned_cols=132 Identities=14% Similarity=0.146 Sum_probs=107.4
Q ss_pred cCCCCccc-CCCCCceecccccCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHH
Q 014225 204 NHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 281 (428)
Q Consensus 204 ~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~ 281 (428)
.++|+|+| +.+|+ +++|++++||+|||+|| +.|||.|..+++.|.+ .. ..+++|++||.| +..
T Consensus 2 ak~p~F~l~~~~G~-~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~---------~~~~~v~gis~D-~~~ 66 (322)
T 4eo3_A 2 ARVKHFELLTDEGK-TFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR----EN---------FEKAQVVGISRD-SVE 66 (322)
T ss_dssp CBCCCCEEEETTSC-EEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SC---------CTTEEEEEEESC-CHH
T ss_pred CCCCCcEEECCCcC-EEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH----Hh---------hCCCEEEEEeCC-CHH
Confidence 36899999 99999 99999999999999999 5799999999887753 11 237999999998 677
Q ss_pred HHHHHHhcCCccccccCCcchhHHHHhcCc----CccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHH
Q 014225 282 SFESYFGTMPWLALPFGDPTIKELTKYFDV----QGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQM 357 (428)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v----~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l 357 (428)
..++|..+.+ ++||++.|.+..+++.||| ..+|++||||++|+|++.... -......+++.+.+
T Consensus 67 ~~~~f~~~~~-l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~~-----------v~~~~h~~~~l~~~ 134 (322)
T 4eo3_A 67 ALKRFKEKND-LKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRR-----------VKVEGHVQEVKEAL 134 (322)
T ss_dssp HHHHHHHHHT-CCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEEEEES-----------CCSTTHHHHHHHHH
T ss_pred HHHHHHHhhC-CceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEEEEeC-----------CCccccHHHHHHHH
Confidence 8888888776 7899999999999999999 458899999999999976422 12344566676666
Q ss_pred HHHHh
Q 014225 358 EEEAK 362 (428)
Q Consensus 358 ~~~~~ 362 (428)
+++..
T Consensus 135 ~~~~~ 139 (322)
T 4eo3_A 135 DRLIE 139 (322)
T ss_dssp HHHHH
T ss_pred hhhch
Confidence 66543
No 205
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.67 E-value=2.8e-17 Score=144.60 Aligned_cols=119 Identities=13% Similarity=0.250 Sum_probs=94.7
Q ss_pred cccccccccCc-cccC----CC-----CEEecccC-CCC-EEEEEEecCCChhhhhh-HHHHHHHHHHHhcCCCcEE-EE
Q 014225 35 SSLLASKDRDY-LLNQ----HG-----TQVKVSDL-EGK-VTALYFSANWYPPCGNF-TGVLVDVYEELRNNGSDFE-VV 100 (428)
Q Consensus 35 ~~~~g~~~pdf-l~~~----~G-----~~v~l~~~-~gk-~vlv~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~-ii 100 (428)
...+|..+|+| |.+. +| ++++++++ +|| +||++||++||++|+.+ +|.|++++++|++.| ++ |+
T Consensus 6 g~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g--~~~vv 83 (171)
T 2pwj_A 6 GTDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKG--VDSVI 83 (171)
T ss_dssp ----CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTT--CSEEE
T ss_pred cccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEE
Confidence 34567899999 9887 57 89999996 996 77889999999999999 999999999999887 88 99
Q ss_pred EEecCCChHHHHHHHhcCCC-ceec-cCChHHHHHHHhhcCCCC-----------CceEEEEcCCCCCCCccccc
Q 014225 101 FVSSDEDLNAFNNYRACMPW-LAVP-YSDLETKKALNRKFDIEG-----------IPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 101 ~vs~D~~~~~~~~~~~~~~~-~~~~-~~d~~~~~~l~~~~~v~~-----------~P~~~lid~~~~dG~i~~~~ 162 (428)
+||.|. ....++|.+++++ ..+| ..|.+ ..+++.||+.. .|++++|+ +|+|++..
T Consensus 84 ~Is~d~-~~~~~~~~~~~~~~~~fp~l~D~~--~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~----~G~I~~~~ 151 (171)
T 2pwj_A 84 CVAIND-PYTVNAWAEKIQAKDAIEFYGDFD--GSFHKSLELTTDLSAGLLGIRSERWSAYVV----DGKVKALN 151 (171)
T ss_dssp EEESSC-HHHHHHHHHHTTCTTTSEEEECTT--CHHHHHHTCEEECTTTTCCEEECCEEEEEE----TTEEEEEE
T ss_pred EEeCCC-HHHHHHHHHHhCCCCceEEEECCc--cHHHHHhCCccccccccCCcccceeEEEEE----CCEEEEEE
Confidence 999975 5578889988875 2333 23543 78899998852 56888888 79998764
No 206
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.67 E-value=7.1e-17 Score=148.92 Aligned_cols=116 Identities=15% Similarity=0.270 Sum_probs=96.1
Q ss_pred cccccccCc-cccCCCCEEecccCCCC-EEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGK-VTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNN 113 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~ 113 (428)
.+|+.+|+| +.+.+| ++++++++|| +++|+|| ++||++|..++|.|++++++|++++ +++|+||+|.. +..++
T Consensus 4 ~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~--v~vigIS~D~~-~~~~~ 79 (233)
T 2v2g_A 4 TLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRG--VKLIALSCDNV-ADHKE 79 (233)
T ss_dssp CTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTT--EEEEEEESSCH-HHHHH
T ss_pred CCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcC--CEEEEEcCCCH-HHHHH
Confidence 368999999 999999 8999999998 9999998 9999999999999999999999987 99999999864 44566
Q ss_pred HHh------cC--CCceec-cCChHHHHHHHhhcCCC------------CCceEEEEcCCCCCCCccccc
Q 014225 114 YRA------CM--PWLAVP-YSDLETKKALNRKFDIE------------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 114 ~~~------~~--~~~~~~-~~d~~~~~~l~~~~~v~------------~~P~~~lid~~~~dG~i~~~~ 162 (428)
|.+ +. ++ .+| +.|.+ ..+++.|++. .+|+++|||+ +|+|+...
T Consensus 80 ~~~~i~~~~~~~~~~-~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~---~G~I~~~~ 143 (233)
T 2v2g_A 80 WSEDVKCLSGVKGDM-PYPIIADET--RELAVKLGMVDPDERTSTGMPLTCRAVFIIGP---DKKLKLSI 143 (233)
T ss_dssp HHHHHHHHHTCCSSC-SSCEEECTT--CHHHHHTTCEEEEEECTTCCEEECEEEEEECT---TSBEEEEE
T ss_pred HHHHHHHhhCcccCC-ceEEEECCh--HHHHHHhCCcCcccccCCCcccccceEEEECC---CCEEEEEE
Confidence 665 34 32 222 22433 6899999984 5899999999 99998664
No 207
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.67 E-value=1.1e-16 Score=146.94 Aligned_cols=116 Identities=15% Similarity=0.234 Sum_probs=93.8
Q ss_pred cccccccCc-cccCCCCEEecccCCCC--EEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGK--VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNN 113 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~ 113 (428)
.+|+.+|+| +.+.+| ++++++++|| +||++||++||++|..++|.|++++++|++.| +++|+||+|.. +..++
T Consensus 6 ~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~--v~vi~IS~D~~-~~~~~ 81 (224)
T 1prx_A 6 LLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRN--VKLIALSIDSV-EDHLA 81 (224)
T ss_dssp CTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTT--EEEEEEESSCH-HHHHH
T ss_pred CCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCC--CEEEEEcCCCH-HHHHH
Confidence 368999999 999999 9999999998 67777899999999999999999999999887 99999999864 33455
Q ss_pred HHhc----------CCCceec-cCChHHHHHHHhhcCCC------------CCceEEEEcCCCCCCCccccc
Q 014225 114 YRAC----------MPWLAVP-YSDLETKKALNRKFDIE------------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 114 ~~~~----------~~~~~~~-~~d~~~~~~l~~~~~v~------------~~P~~~lid~~~~dG~i~~~~ 162 (428)
+.+. .++ .+| +.|.+ ..+++.|++. .+|+++|||+ +|+|+...
T Consensus 82 ~~~~i~~~~~~~~~~~~-~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~---~G~I~~~~ 147 (224)
T 1prx_A 82 WSKDINAYNSEEPTEKL-PFPIIDDRN--RELAILLGMLDPAEKDEKGMPVTARVVFVFGP---DKKLKLSI 147 (224)
T ss_dssp HHHHHHHHTTSCCCSCC-SSCEEECTT--CHHHHHTTSSCSCTTCSSSCCTTCCEEEEECT---TSBEEEEE
T ss_pred HHHHHHHhhCcccccCc-CcceeecCc--hHHHHHhCCCCcccccCCCccccceEEEEECC---CCEEEEEE
Confidence 5543 332 222 22433 6789999973 4799999999 99998664
No 208
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.65 E-value=1.3e-16 Score=145.99 Aligned_cols=116 Identities=14% Similarity=0.264 Sum_probs=93.0
Q ss_pred cccccccCc-cccC--CCCEEecccCCCC--EEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 37 LLASKDRDY-LLNQ--HGTQVKVSDLEGK--VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 37 ~~g~~~pdf-l~~~--~G~~v~l~~~~gk--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
.+|+.+|+| +.+. +| ++++++++|| +||++||++||++|..++|.|++++++|++++ +++|+||+|... ..
T Consensus 4 ~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~--v~vi~vS~D~~~-~~ 79 (220)
T 1xcc_A 4 HLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLN--CKLIGFSCNSKE-SH 79 (220)
T ss_dssp CTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCHH-HH
T ss_pred CCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcC--CEEEEEeCCCHH-HH
Confidence 468999999 9999 99 8999999998 66667799999999999999999999999887 999999998643 34
Q ss_pred HHHHh-------cCCCceec-cCChHHHHHHHhhcCCC------------CCceEEEEcCCCCCCCccccc
Q 014225 112 NNYRA-------CMPWLAVP-YSDLETKKALNRKFDIE------------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 112 ~~~~~-------~~~~~~~~-~~d~~~~~~l~~~~~v~------------~~P~~~lid~~~~dG~i~~~~ 162 (428)
+++.+ +.++ .+| +.|.+ ..+++.|++. .+|+++|||+ +|+|+...
T Consensus 80 ~~~~~~i~~~~~~~~~-~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~flID~---~G~I~~~~ 144 (220)
T 1xcc_A 80 DKWIEDIKYYGKLNKW-EIPIVCDES--RELANKLKIMDEQEKDITGLPLTCRCLFFISP---EKKIKATV 144 (220)
T ss_dssp HHHHHHHHHHHTCSCC-CCCEEECTT--SHHHHHHTCEEEEEECTTSCEEECEEEEEECT---TSBEEEEE
T ss_pred HHHHHHHHHHhcCCCC-cceeEECch--hHHHHHhCCCCcccccCCCCCcccceEEEECC---CCEEEEEE
Confidence 44444 3332 222 22433 6889999983 4799999999 99998764
No 209
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.65 E-value=2.4e-16 Score=143.46 Aligned_cols=116 Identities=7% Similarity=0.126 Sum_probs=95.4
Q ss_pred cccccccCc-cccCCCCEEecccCCCCEEEEEEecCC-Chhhh-----hhHHHHHHHHHHHhcCCCcEEEEEEecCCChH
Q 014225 37 LLASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANW-YPPCG-----NFTGVLVDVYEELRNNGSDFEVVFVSSDEDLN 109 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~w-C~~C~-----~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~ 109 (428)
.+|+.+||| |.+.+|++++|++++||+++|+||++| ||+|. .+++.|+++ | .| ++|++||.|. ..
T Consensus 23 ~vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~g--v~VvgIS~Ds-~~ 94 (224)
T 3keb_A 23 RKGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PH--LKLIVITVDS-PS 94 (224)
T ss_dssp CTTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TT--SEEEEEESSC-HH
T ss_pred CCCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CC--CEEEEEECCC-HH
Confidence 469999999 999999999999999999999999998 99999 889988887 4 44 8999999984 56
Q ss_pred HHHHHHhcCCCceec-cCChHHHHHHHhhcCCCC---------CceEEEEcCCCCCCCcccccch
Q 014225 110 AFNNYRACMPWLAVP-YSDLETKKALNRKFDIEG---------IPCLVVLQPYDDKDDATLHDGV 164 (428)
Q Consensus 110 ~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~---------~P~~~lid~~~~dG~i~~~~~~ 164 (428)
..++|.+++++..++ .+|.. ...+++.||+.. +|++||||+ +|+|++....
T Consensus 95 ~~~~f~~~~gl~~fplLsD~~-~~~vak~yGv~~~~~~~~G~~~p~tfvID~---dG~I~~~~~~ 155 (224)
T 3keb_A 95 SLARARHEHGLPNIALLSTLR-GRDFHKRYGVLITEYPLSGYTSPAIILADA---ANVVHYSERL 155 (224)
T ss_dssp HHHHHHHHHCCTTCEEEESTT-CTTHHHHTTCBCCSTTSTTCBCCEEEEECT---TCBEEEEEEC
T ss_pred HHHHHHHHcCCCCceEEEcCC-chHHHHHhCCccccccccCCccCEEEEEcC---CCEEEEEEec
Confidence 688888877652222 33431 168999999864 799999999 9999977543
No 210
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.63 E-value=9.7e-17 Score=124.06 Aligned_cols=80 Identities=34% Similarity=0.686 Sum_probs=73.0
Q ss_pred cccCCCCChHHHHHHHHHHHHHHhcCCCCcccccc-ccceeeeeccCCCCCcccccccCCCCceeEeccCCCCCCccccc
Q 014225 339 QENAYPFTEAKLEFLEKQMEEEAKNLPRSEFHIGH-RHELNLVSEGTGGGPFICCDCDEQGSGWAYQCLECGYEVHPKCV 417 (428)
Q Consensus 339 g~~~~p~~~~~~~~L~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~c~~C~~~g~~~~~~~~~~~~~~~~~~~ 417 (428)
|+++||||++.+.+|.+.+.+.-+..|..+.+..| +|.|.|.. ..+++|+.|++.+.+|.|+|..|+|+||+.||
T Consensus 1 ~~~a~pfte~~~~~~~~~lhe~Ca~lP~~i~Hp~Hp~H~L~L~~----~~~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca 76 (89)
T 1v5n_A 1 GSSGSSGTEERLKEIEAKYDEIAKDWPKKVKHVLHEEHELELTR----VQVYTCDKCEEEGTIWSYHCDECDFDLHAKCA 76 (89)
T ss_dssp CCCCCCCCSSCCSHHHHHHHHHTSSSCSEECCSTTTTSCEEEEC----CSSCCCTTTSCCCCSCEEECTTTCCCCCHHHH
T ss_pred CCcccccCHHHHHHHHHHHhHHHHcCCceecCCCCCCCccEEee----CCCeEeCCCCCcCCCcEEEcCCCCCeEcHHhc
Confidence 67899999999999999999999999999999999 59999954 34799999999999999999999999999999
Q ss_pred cccCC
Q 014225 418 RAVDR 422 (428)
Q Consensus 418 ~~~~~ 422 (428)
.....
T Consensus 77 ~~p~~ 81 (89)
T 1v5n_A 77 LNEDT 81 (89)
T ss_dssp HCSSC
T ss_pred CCCCc
Confidence 87554
No 211
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.63 E-value=5.9e-15 Score=137.15 Aligned_cols=70 Identities=21% Similarity=0.385 Sum_probs=61.1
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++++|+|||+||++|+.+.|.+.++++++++.+.++.++.|+++.+.. ..+++.|+
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~----------------------~~l~~~~~ 86 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN----------------------SAVCRDFN 86 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTT----------------------HHHHHHTT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhh----------------------HHHHHHcC
Confidence 35899999999999999999999999999998743349999988765433 78999999
Q ss_pred CCCCceEEEEcC
Q 014225 140 IEGIPCLVVLQP 151 (428)
Q Consensus 140 v~~~P~~~lid~ 151 (428)
|.++|+++++++
T Consensus 87 v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 87 IPGFPTVRFFXA 98 (244)
T ss_dssp CCSSSEEEEECT
T ss_pred CCccCEEEEEeC
Confidence 999999999996
No 212
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.63 E-value=3.8e-16 Score=145.14 Aligned_cols=116 Identities=15% Similarity=0.309 Sum_probs=93.2
Q ss_pred cccccccCc-cccCCCCEEec-ccC--CCCE-EEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 37 LLASKDRDY-LLNQHGTQVKV-SDL--EGKV-TALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G~~v~l-~~~--~gk~-vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
.+|+.+||| +.+.+| ++++ +++ +||. ||++||++||++|..++|.|++++++|+++| +++|+||+|... ..
T Consensus 6 ~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~g--v~VI~VS~Ds~~-~~ 81 (249)
T 3a2v_A 6 LIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLG--VDLIGLSVDSVF-SH 81 (249)
T ss_dssp CTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTT--EEEEEEESSCHH-HH
T ss_pred CCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCC--cEEEEEECCCHH-HH
Confidence 579999999 999999 7999 999 9995 5668899999999999999999999999987 999999998643 23
Q ss_pred HHHHhc------CCCceec-cCChHHHHHHHhhcCCC-------CCceEEEEcCCCCCCCccccc
Q 014225 112 NNYRAC------MPWLAVP-YSDLETKKALNRKFDIE-------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 112 ~~~~~~------~~~~~~~-~~d~~~~~~l~~~~~v~-------~~P~~~lid~~~~dG~i~~~~ 162 (428)
.++.+. .++ .+| ++|.+ ..+++.|++. .+|+++|||+ +|+++...
T Consensus 82 ~~w~~~~~~~~~~~i-~fPil~D~~--~~ia~~ygv~~~~~g~~~~p~~fIID~---dG~I~~~~ 140 (249)
T 3a2v_A 82 IKWKEWIERHIGVRI-PFPIIADPQ--GTVARRLGLLHAESATHTVRGVFIVDA---RGVIRTML 140 (249)
T ss_dssp HHHHHHHHHHTCCCC-CSCEEECTT--SHHHHHHTCCCTTCSSSCCEEEEEECT---TSBEEEEE
T ss_pred HHHHHHHHHhcCCCC-ceeEEECCc--hHHHHHhCCccccCCCcccceEEEECC---CCeEEEEE
Confidence 333331 222 122 22433 7899999987 8999999999 99998663
No 213
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.62 E-value=1.1e-15 Score=126.95 Aligned_cols=113 Identities=12% Similarity=0.161 Sum_probs=85.7
Q ss_pred CCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHH
Q 014225 205 HDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSF 283 (428)
Q Consensus 205 ~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~ 283 (428)
..++++. +.+|. .......+||+++|+||++||++|+.+.|.|.+++++++. ++.++.|++|.+.
T Consensus 5 ~~~~l~~~~~~~~-~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~----------~v~~~~v~~~~d~--- 70 (126)
T 2l57_A 5 GIKQINFQSINVV-ENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG----------KFNIYYARLEEEK--- 70 (126)
T ss_dssp CSSCTTTTCCSEE-SSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS----------SCEEEEEETTSSH---
T ss_pred ccCCCCccccchh-HHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC----------CeEEEEEeCCCCc---
Confidence 3455666 66665 4445667789999999999999999999999999988863 5899999944222
Q ss_pred HHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhc
Q 014225 284 ESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 284 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
..++++.|+|.++|+++++|++|+++.+..+ ..+ .++|.+.|++.+..
T Consensus 71 ------------------~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G-----------~~~---~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 71 ------------------NIDLAYKYDANIVPTTVFLDKEGNKFYVHQG-----------LMR---KNNIETILNSLGVK 118 (126)
T ss_dssp ------------------HHHHHHHTTCCSSSEEEEECTTCCEEEEEES-----------CCC---HHHHHHHHHHHCCC
T ss_pred ------------------hHHHHHHcCCcceeEEEEECCCCCEEEEecC-----------CCC---HHHHHHHHHHHhcc
Confidence 3678999999999999999999999876432 122 25566777666543
No 214
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.62 E-value=1.8e-15 Score=121.82 Aligned_cols=74 Identities=23% Similarity=0.462 Sum_probs=64.2
Q ss_pred ccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcch
Q 014225 223 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 302 (428)
Q Consensus 223 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 302 (428)
+..+|+|+|+|||+||++|+.+.|.+.++++.+. ++.++.|++|..
T Consensus 17 ~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-----------~~~~~~vd~d~~----------------------- 62 (105)
T 3zzx_A 17 EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-----------DVVFLKVDVDEC----------------------- 62 (105)
T ss_dssp HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TEEEEEEETTTC-----------------------
T ss_pred hcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-----------CeEEEEEecccC-----------------------
Confidence 3457899999999999999999999999988764 578888888755
Q ss_pred hHHHHhcCcCccceEEEECCCCcEEeccc
Q 014225 303 KELTKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 303 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
.++++.|+|.++||++++ ++|+++.+..
T Consensus 63 ~~l~~~~~V~~~PT~~~~-~~G~~v~~~~ 90 (105)
T 3zzx_A 63 EDIAQDNQIACMPTFLFM-KNGQKLDSLS 90 (105)
T ss_dssp HHHHHHTTCCBSSEEEEE-ETTEEEEEEE
T ss_pred HHHHHHcCCCeecEEEEE-ECCEEEEEEe
Confidence 679999999999999998 8999998743
No 215
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.62 E-value=1.7e-15 Score=128.27 Aligned_cols=84 Identities=23% Similarity=0.386 Sum_probs=75.7
Q ss_pred CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCC
Q 014225 212 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 291 (428)
Q Consensus 212 ~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~ 291 (428)
+.+|. ...++.++|++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.+
T Consensus 38 ~~~~~-~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~------------ 94 (141)
T 3hxs_A 38 DYENH-SKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK----------IYIYKVNVDKE------------ 94 (141)
T ss_dssp CCSSC-CCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT----------CEEEEEETTTC------------
T ss_pred ccccc-hhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc----------eEEEEEECCCC------------
Confidence 77788 88999999999999999999999999999999999988754 88999998865
Q ss_pred ccccccCCcchhHHHHhcCcCccceEEEECCCCcEEec
Q 014225 292 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 292 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 329 (428)
.++++.|+|.++|+++++|++|+++..
T Consensus 95 -----------~~~~~~~~v~~~Pt~~~~~~~g~~~~~ 121 (141)
T 3hxs_A 95 -----------PELARDFGIQSIPTIWFVPMKGEPQVN 121 (141)
T ss_dssp -----------HHHHHHTTCCSSSEEEEECSSSCCEEE
T ss_pred -----------HHHHHHcCCCCcCEEEEEeCCCCEEEE
Confidence 678999999999999999999998743
No 216
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.59 E-value=7.1e-15 Score=122.51 Aligned_cols=93 Identities=14% Similarity=0.363 Sum_probs=76.1
Q ss_pred ccCCCCcccCCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHH
Q 014225 203 TNHDRGYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTS 282 (428)
Q Consensus 203 g~~~p~f~l~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~ 282 (428)
..+.|++. ..++. .+.....+||+++|+||++||++|+++.|.|.+++++++++ +.++.|++|.+
T Consensus 21 ~~~~~~~~-~~~~~-~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~----------v~~~~vd~d~~--- 85 (128)
T 3ul3_B 21 FKKVPRLQ-QNGSN-IINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR----------IYLLKVDLDKN--- 85 (128)
T ss_dssp -----CCC-CCCCS-SSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG----------EEEEEEEGGGC---
T ss_pred hccCCccc-cCCcc-HHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC----------eEEEEEECCCC---
Confidence 34456665 55555 67777788999999999999999999999999999998754 89999998865
Q ss_pred HHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccc
Q 014225 283 FESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 283 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
..+++.|+|.++|+++++ ++|+++.+..
T Consensus 86 --------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~~~ 113 (128)
T 3ul3_B 86 --------------------ESLARKFSVKSLPTIILL-KNKTMLARKD 113 (128)
T ss_dssp --------------------HHHHHHTTCCSSSEEEEE-ETTEEEEEES
T ss_pred --------------------HHHHHHcCCCCcCEEEEE-ECCEEEEEec
Confidence 678999999999999999 8999888753
No 217
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.59 E-value=2.2e-15 Score=136.22 Aligned_cols=120 Identities=14% Similarity=0.247 Sum_probs=94.9
Q ss_pred ccccccccccCc-cc---cCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCCh
Q 014225 34 FSSLLASKDRDY-LL---NQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDL 108 (428)
Q Consensus 34 ~~~~~g~~~pdf-l~---~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~ 108 (428)
+...+|++|||| +. +.+|++++|++++||.|+|+|| +.||+.|..+++.+++.+++|++.| +++++||.|...
T Consensus 21 M~~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g--~~vigiS~Ds~~ 98 (216)
T 3sbc_A 21 MVAQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQG--AQVLFASTDSEY 98 (216)
T ss_dssp -CCCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTT--EEEEEEESSCHH
T ss_pred chhhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCC--ceEEEeecCchh
Confidence 334689999999 75 6677899999999999999999 9999999999999999999999998 999999998653
Q ss_pred HHHHHHHhcC----C--Cceec-cCChHHHHHHHhhcCCC------CCceEEEEcCCCCCCCcccc
Q 014225 109 NAFNNYRACM----P--WLAVP-YSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 109 ~~~~~~~~~~----~--~~~~~-~~d~~~~~~l~~~~~v~------~~P~~~lid~~~~dG~i~~~ 161 (428)
. -+++.+.. + -+.+| .+|.+ ..++++||+- ..+++||||+ +|+|...
T Consensus 99 s-h~aw~~~~~~~~~~~~l~fpllsD~~--~~vak~YGv~~~~~g~~~R~tFiID~---~G~Ir~~ 158 (216)
T 3sbc_A 99 S-LLAWTNIPRKEGGLGPINIPLLADTN--HSLSRDYGVLIEEEGVALRGLFIIDP---KGVIRHI 158 (216)
T ss_dssp H-HHHHHTSCGGGTCCCSCSSCEEECTT--SHHHHHHTCEETTTTEECEEEEEECT---TSBEEEE
T ss_pred h-HHHHHHHHHHhCCccCcccceEeCCC--CHHHHHcCCeeccCCceeeEEEEECC---CCeEEEE
Confidence 2 33444322 1 12233 22443 7999999983 4689999999 9988765
No 218
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.58 E-value=8.8e-16 Score=129.22 Aligned_cols=96 Identities=18% Similarity=0.326 Sum_probs=76.8
Q ss_pred hhccCCCCcc-c-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEE
Q 014225 201 LLTNHDRGYL-L-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVS 275 (428)
Q Consensus 201 ~~g~~~p~f~-l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~~~~~~~~iv~is 275 (428)
..+.++|+|. + +.++. ...+++.+||+++|+||++||++|+.+.|.+ .++.+.++ ++.++.|+
T Consensus 5 ~~~~~~~~f~~~~~~~~~-~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-----------~~~~~~vd 72 (134)
T 2fwh_A 5 AQTQTHLNFTQIKTVDEL-NQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-----------DTVLLQAN 72 (134)
T ss_dssp -----CCCCEECCSHHHH-HHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-----------TSEEEEEE
T ss_pred cccccCCCcEEecCHHHH-HHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-----------CcEEEEEe
Confidence 3477888998 5 66666 6778888899999999999999999999988 78877764 47899998
Q ss_pred cCCCHHHHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEE
Q 014225 276 TDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 327 (428)
Q Consensus 276 ~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~ 327 (428)
++... +....+++.|+|.++|+++++|++|+++
T Consensus 73 ~~~~~-------------------~~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 73 VTAND-------------------AQDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp CTTCC-------------------HHHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred CCCCc-------------------chHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 87531 2347889999999999999999999997
No 219
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.58 E-value=1.9e-15 Score=132.42 Aligned_cols=119 Identities=13% Similarity=0.144 Sum_probs=98.5
Q ss_pred hccCCCCccc-CCCC---------Cceeccccc-CCcEEE-EEEeccCChhHHh-hhHHHHHHHHHHHhhhhhcCCCCCC
Q 014225 202 LTNHDRGYLL-GHPP---------DEKVPVSSL-VGKTVG-LYFSARWCIPCEK-FMPKLLSIYQKIKQNLVEKGDALED 268 (428)
Q Consensus 202 ~g~~~p~f~l-~~~g---------~~~v~l~~~-~gk~vl-l~F~a~wC~~C~~-~~~~l~~l~~~~~~~~~~~~~~~~~ 268 (428)
+|++.|+.++ ...+ -+.++++++ +||+++ ++||+.|||+|.. ++|.|++.+++|+++ +
T Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~---------g 82 (176)
T 4f82_A 12 VGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAA---------G 82 (176)
T ss_dssp TTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT---------T
T ss_pred cCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhC---------C
Confidence 5889999776 2211 138999997 998654 5666999999999 999999999999987 8
Q ss_pred E-EEEEEEcCCCHHHHHHHHhcCCcc-ccccCCcchhHHHHhcCcC-----------ccceEEEECCCCcEEeccc
Q 014225 269 F-EVVFVSTDRDQTSFESYFGTMPWL-ALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 269 ~-~iv~is~d~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~ 331 (428)
+ +|++||+| +....++|.++.+.. +||++.|.+.++++.||+. ..|++||| ++|+|++...
T Consensus 83 ~d~VigIS~D-~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~~ 156 (176)
T 4f82_A 83 IDEIWCVSVN-DAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLAV 156 (176)
T ss_dssp CCEEEEEESS-CHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEEE
T ss_pred CCEEEEEeCC-CHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEEE
Confidence 9 99999999 677888888887733 4999999999999999983 24889999 9999998853
No 220
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.58 E-value=2.1e-15 Score=139.28 Aligned_cols=139 Identities=21% Similarity=0.281 Sum_probs=96.5
Q ss_pred CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCC
Q 014225 212 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 291 (428)
Q Consensus 212 ~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~ 291 (428)
..++. .+.....+|++++|+||++||++|+.+.|.|.++++++++. +.++.++.|+++.+
T Consensus 19 ~l~~~-~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~-------~~~~~~~~vd~~~~------------ 78 (241)
T 3idv_A 19 VLNDA-NFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDK-------DPPIPVAKIDATSA------------ 78 (241)
T ss_dssp EECTT-THHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS-------SSCCCEEEEETTTC------------
T ss_pred Eeccc-CHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhc-------CCceEEEEEeccCC------------
Confidence 34444 44443456899999999999999999999999999999865 34588888888755
Q ss_pred ccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcCCCC----
Q 014225 292 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNLPRS---- 367 (428)
Q Consensus 292 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~~~~---- 367 (428)
..+++.|+|.++||++++ ++|+++...|. .+ .++|.+.+++.+......
T Consensus 79 -----------~~l~~~~~v~~~Pt~~~~-~~g~~~~~~g~------------~~---~~~l~~~i~~~~~~~~~~~~~~ 131 (241)
T 3idv_A 79 -----------SVLASRFDVSGYPTIKIL-KKGQAVDYEGS------------RT---QEEIVAKVREVSQPDWTPPPEV 131 (241)
T ss_dssp -----------HHHHHHTTCCSSSEEEEE-ETTEEEECCSC------------SC---HHHHHHHHHHHHSTTCCCCCCS
T ss_pred -----------HHHHHhcCCCcCCEEEEE-cCCCcccccCc------------cc---HHHHHHHHhhccCccccccccc
Confidence 679999999999999999 56776643321 22 255667777666532111
Q ss_pred ccccc--------cccceeeeeccCCCCCcccccccCCCCce
Q 014225 368 EFHIG--------HRHELNLVSEGTGGGPFICCDCDEQGSGW 401 (428)
Q Consensus 368 ~~~~~--------~~~~~~~~~~~~~~~~~~c~~C~~~g~~~ 401 (428)
..... ..+...+ ..+.++||++|+.+.+.|
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~----v~f~a~wC~~C~~~~p~~ 169 (241)
T 3idv_A 132 TLVLTKENFDEVVNDADIIL----VEFYAPWCGHCKKLAPEY 169 (241)
T ss_dssp SEECCTTTHHHHHHHCSEEE----EEEECTTCTGGGGTHHHH
T ss_pred ceeccHHHHHHhhccCCeEE----EEEECCCCHHHHHhHHHH
Confidence 10000 1233344 456799999999875543
No 221
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.56 E-value=1.6e-14 Score=123.44 Aligned_cols=115 Identities=17% Similarity=0.280 Sum_probs=89.8
Q ss_pred ccCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHH
Q 014225 203 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 281 (428)
Q Consensus 203 g~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~ 281 (428)
+.+.++..+ +.++. .+......+++++|+||++||++|+.+.|.|+++++++..+ +.++.|++|.+
T Consensus 32 ~~~~~~~~v~~l~~~-~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~----------~~~~~vd~~~~-- 98 (148)
T 3p2a_A 32 GHSLFDGEVINATAE-TLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK----------VRFVKVNTEAE-- 98 (148)
T ss_dssp CCBTTCCCCEECCTT-THHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT----------CEEEEEETTTC--
T ss_pred CCccccCCceecCHH-HHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc----------eEEEEEECcCC--
Confidence 445566666 77777 65544467899999999999999999999999999988644 88999988865
Q ss_pred HHHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHH
Q 014225 282 SFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEA 361 (428)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~ 361 (428)
..+++.|+|.++|+++++ ++|+++.+..+. .+ .++|.+.|++++
T Consensus 99 ---------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G~-----------~~---~~~l~~~l~~~l 142 (148)
T 3p2a_A 99 ---------------------PALSTRFRIRSIPTIMLY-RNGKMIDMLNGA-----------VP---KAPFDNWLDEQL 142 (148)
T ss_dssp ---------------------HHHHHHTTCCSSSEEEEE-ETTEEEEEESSC-----------CC---HHHHHHHHHHHH
T ss_pred ---------------------HHHHHHCCCCccCEEEEE-ECCeEEEEEeCC-----------CC---HHHHHHHHHHHh
Confidence 678999999999999999 799988764331 22 366777788877
Q ss_pred hcCCC
Q 014225 362 KNLPR 366 (428)
Q Consensus 362 ~~~~~ 366 (428)
...+.
T Consensus 143 ~~~~~ 147 (148)
T 3p2a_A 143 SRDPN 147 (148)
T ss_dssp HSCC-
T ss_pred cccCC
Confidence 76543
No 222
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.56 E-value=3.3e-14 Score=145.78 Aligned_cols=84 Identities=20% Similarity=0.350 Sum_probs=67.0
Q ss_pred cccCCCCEEecccC-CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceec
Q 014225 46 LLNQHGTQVKVSDL-EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVP 124 (428)
Q Consensus 46 l~~~~G~~v~l~~~-~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~ 124 (428)
+...+++++..... .+++++|+|||+||++|+.++|.+.++++++++.+..+.++.|++|.+..
T Consensus 14 V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~--------------- 78 (519)
T 3t58_A 14 LTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETN--------------- 78 (519)
T ss_dssp SEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGG---------------
T ss_pred cEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcccc---------------
Confidence 34444444433333 35899999999999999999999999999998843348999988765433
Q ss_pred cCChHHHHHHHhhcCCCCCceEEEEcC
Q 014225 125 YSDLETKKALNRKFDIEGIPCLVVLQP 151 (428)
Q Consensus 125 ~~d~~~~~~l~~~~~v~~~P~~~lid~ 151 (428)
..+++.|+|.++|+++++++
T Consensus 79 -------~~l~~~~~V~~~PTl~~f~~ 98 (519)
T 3t58_A 79 -------SAVCREFNIAGFPTVRFFQA 98 (519)
T ss_dssp -------HHHHHHTTCCSBSEEEEECT
T ss_pred -------HHHHHHcCCcccCEEEEEcC
Confidence 78999999999999999995
No 223
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.56 E-value=1.3e-14 Score=123.42 Aligned_cols=69 Identities=13% Similarity=0.204 Sum_probs=62.5
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++|||+|||+||+||+.+.|.|.++++++.++ +.|+.|++|.. .+
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~----------v~f~kVDVDe~-----------------------~e 86 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF----------CVIYLVDITEV-----------------------PD 86 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT----------EEEEEEETTTC-----------------------CT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC----------cEEEEEECCCC-----------------------HH
Confidence 3589999999999999999999999999999754 78999999866 67
Q ss_pred HHHhcCcCccceEEEECCCCcEE
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTV 327 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~ 327 (428)
++..|+|.++||++++ ++|+.+
T Consensus 87 ~a~~y~V~siPT~~fF-k~G~~v 108 (160)
T 2av4_A 87 FNTMYELYDPVSVMFF-YRNKHM 108 (160)
T ss_dssp TTTTTTCCSSEEEEEE-ETTEEE
T ss_pred HHHHcCCCCCCEEEEE-ECCEEE
Confidence 8999999999999999 888887
No 224
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.55 E-value=6.3e-15 Score=127.13 Aligned_cols=113 Identities=20% Similarity=0.316 Sum_probs=83.0
Q ss_pred CCCceecccccCCcEEEEEEe-ccCChhHHhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhc
Q 014225 214 PPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGT 289 (428)
Q Consensus 214 ~g~~~v~l~~~~gk~vll~F~-a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~ 289 (428)
.++ .+.++..+||+++|+|| ++||++|+.+.|.| .++.+.+.. ++.++.|+++....
T Consensus 36 ~~~-~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~----------~~~~v~vd~~~~~~-------- 96 (154)
T 2ju5_A 36 YAE-ALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV----------HLHMVEVDFPQKNH-------- 96 (154)
T ss_dssp HHH-HHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH----------HCEEEEEECCSSCC--------
T ss_pred HHH-HHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC----------cEEEEEecCccccC--------
Confidence 344 66777788999999999 99999999999999 677655543 47888888875420
Q ss_pred CCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 290 MPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 290 ~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
+.++. .+....+++.|+|.++|+++|||++|+++.+. +. . +...+++.+.|+++++
T Consensus 97 ---~~~~~-~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~-------~-----~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 97 ---QPEEQ-RQKNQELKAQYKVTGFPELVFIDAEGKQLARM-GF-------E-----PGGGAAYVSKVKSALK 152 (154)
T ss_dssp ---CCHHH-HHHHHHHHHHTTCCSSSEEEEECTTCCEEEEE-CC-------C-----TTCHHHHHHHHHHHHT
T ss_pred ---CChhh-HhhHHHHHHHcCCCCCCEEEEEcCCCCEEEEe-cC-------C-----CCCHHHHHHHHHHHHh
Confidence 11221 24457899999999999999999999999874 21 1 1123566777777665
No 225
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.54 E-value=3.6e-14 Score=118.82 Aligned_cols=79 Identities=27% Similarity=0.426 Sum_probs=67.8
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHHH--HHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcc
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKLL--SIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 301 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l~--~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~ 301 (428)
..||+++|+||++||++|+.+.|.|. ++.+.++.. +.++.|+++.. +.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~----------~~~~~vd~~~~--------------------~~ 76 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH----------FEVVKIDVGNF--------------------DR 76 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH----------CEEEEEECTTT--------------------TS
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC----------EEEEEEeCCcc--------------------cc
Confidence 35889999999999999999999999 999988755 88999998421 12
Q ss_pred hhHHHHhcCc---CccceEEEECCCCcEEecccc
Q 014225 302 IKELTKYFDV---QGIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 302 ~~~~~~~~~v---~~~P~~~lid~~G~i~~~~~~ 332 (428)
..++++.|+| .++|+++++|++|+++.+..+
T Consensus 77 ~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g 110 (133)
T 3fk8_A 77 NLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKG 110 (133)
T ss_dssp SHHHHHHTTCGGGGCSSEEEEECTTSCEEEECCS
T ss_pred hHHHHHHhCCccCCccceEEEECCCCCEEEEecC
Confidence 3789999999 999999999999999988655
No 226
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.53 E-value=8.3e-15 Score=128.11 Aligned_cols=118 Identities=14% Similarity=0.254 Sum_probs=99.9
Q ss_pred hhccCCCCccc-CCCC-Cceecccc-cCCcEEEEEEe-ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEE-EEEEE
Q 014225 201 LLTNHDRGYLL-GHPP-DEKVPVSS-LVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFE-VVFVS 275 (428)
Q Consensus 201 ~~g~~~p~f~l-~~~g-~~~v~l~~-~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~-iv~is 275 (428)
.+|+++|+|++ +..+ + .+++++ ++||++||+|| ..|||.|..+++.+++.+.+|++. +++ |++||
T Consensus 15 ~vGd~aPdf~l~~~g~~~-~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~---------gv~~VigIS 84 (171)
T 2xhf_A 15 KVGDIIPDVLVYEDVPSK-SFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEE---------GYHTIACIA 84 (171)
T ss_dssp CTTCBCCCCEEECSSTTC-EEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHT---------TCCEEEEEE
T ss_pred cCcCCCCCeEEecCCCCc-EEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC---------CCCEEEEEe
Confidence 46999999999 5442 7 999999 59999999999 579999999999999999999987 885 99999
Q ss_pred cCCCHHHHHHHHhcCCc-cccccCCcchhHHHHhcCcC-----------ccceEEEECCCCcEEecc
Q 014225 276 TDRDQTSFESYFGTMPW-LALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 276 ~d~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~ 330 (428)
+| +....++|..+.+. .+||++.|.+.++++.||+. ....+|||| +|+|++..
T Consensus 85 ~D-~~~~~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~ 149 (171)
T 2xhf_A 85 VN-DPFVMAAWGKTVDPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVS 149 (171)
T ss_dssp SS-CHHHHHHHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred CC-CHHHHHHHHHhcCCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEE
Confidence 99 66677777776552 27999999999999999983 246789998 99999875
No 227
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.53 E-value=1.6e-14 Score=122.13 Aligned_cols=84 Identities=21% Similarity=0.389 Sum_probs=75.7
Q ss_pred cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceecc
Q 014225 46 LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPY 125 (428)
Q Consensus 46 l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~ 125 (428)
+.+.+|..+.++.++||+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|..
T Consensus 36 l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~------------------ 94 (141)
T 3hxs_A 36 IADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK---IYIYKVNVDKE------------------ 94 (141)
T ss_dssp TCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEETTTC------------------
T ss_pred hhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc---eEEEEEECCCC------------------
Confidence 678899999999999999999999999999999999999999999764 88888877654
Q ss_pred CChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcc
Q 014225 126 SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 159 (428)
Q Consensus 126 ~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~ 159 (428)
..+++.|++.++|+++++++ +|+++
T Consensus 95 ------~~~~~~~~v~~~Pt~~~~~~---~g~~~ 119 (141)
T 3hxs_A 95 ------PELARDFGIQSIPTIWFVPM---KGEPQ 119 (141)
T ss_dssp ------HHHHHHTTCCSSSEEEEECS---SSCCE
T ss_pred ------HHHHHHcCCCCcCEEEEEeC---CCCEE
Confidence 67889999999999999998 88775
No 228
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.52 E-value=4.1e-14 Score=136.69 Aligned_cols=110 Identities=18% Similarity=0.200 Sum_probs=89.4
Q ss_pred ccccCc-cccCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhc
Q 014225 40 SKDRDY-LLNQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRAC 117 (428)
Q Consensus 40 ~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~ 117 (428)
+++|+| |.+.+|++++|++++||+|+|+|| +.|||.|..+++.+++ .... +++|++||.|. ....++|.++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~--~~~v~gis~D~-~~~~~~f~~~ 74 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFE--KAQVVGISRDS-VEALKRFKEK 74 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCT--TEEEEEEESCC-HHHHHHHHHH
T ss_pred CCCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhC--CCEEEEEeCCC-HHHHHHHHHh
Confidence 468999 999999999999999999999999 6899999999988754 1223 49999999974 5567888887
Q ss_pred CCCceeccCChHHHHHHHhhcCC----CCCceEEEEcCCCCCCCcccc
Q 014225 118 MPWLAVPYSDLETKKALNRKFDI----EGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 118 ~~~~~~~~~d~~~~~~l~~~~~v----~~~P~~~lid~~~~dG~i~~~ 161 (428)
++..+...+|.+ ..+++.||+ ..+|++||||+ +|+|+..
T Consensus 75 ~~l~fp~l~D~~--~~v~~~ygv~~~~~~~r~tfiId~---~G~i~~~ 117 (322)
T 4eo3_A 75 NDLKVTLLSDPE--GILHEFFNVLENGKTVRSTFLIDR---WGFVRKE 117 (322)
T ss_dssp HTCCSEEEECTT--CHHHHHTTCEETTEECCEEEEECT---TSBEEEE
T ss_pred hCCceEEEEcCc--hHHHHhcCCCCCCcCccEEEEECC---CCEEEEE
Confidence 765333344554 799999998 45899999999 9999754
No 229
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.52 E-value=6.8e-14 Score=117.80 Aligned_cols=93 Identities=26% Similarity=0.431 Sum_probs=75.1
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.+ .+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~----------v~~~~vd~~~~-----------------------~~ 83 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ----------IVIYKVDTEKE-----------------------QE 83 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT----------CEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC----------EEEEEEeCCCC-----------------------HH
Confidence 4689999999999999999999999999988643 88999998865 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcCC
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNLP 365 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~~ 365 (428)
+++.|+|.++|+++++|++|+++...|. .+ .++|.+.|++.+...+
T Consensus 84 l~~~~~v~~~Pt~~~~~~~G~~~~~~G~------------~~---~~~l~~~l~~~~~~~~ 129 (136)
T 2l5l_A 84 LAGAFGIRSIPSILFIPMEGKPEMAQGA------------MP---KASFKKAIDEFLLKKE 129 (136)
T ss_dssp HHHHTTCCSSCEEEEECSSSCCEEEESC------------CC---HHHHHHHHHHHHTSCT
T ss_pred HHHHcCCCCCCEEEEECCCCcEEEEeCC------------CC---HHHHHHHHHHHhhccC
Confidence 8999999999999999999998743221 22 3567777777766443
No 230
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.51 E-value=5e-14 Score=113.91 Aligned_cols=72 Identities=24% Similarity=0.442 Sum_probs=63.4
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchh
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 303 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 303 (428)
.++|+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.. .
T Consensus 22 ~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-----------~~~~~~vd~~~~-----------------------~ 67 (109)
T 3f3q_A 22 AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-----------QADFYKLDVDEL-----------------------G 67 (109)
T ss_dssp TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------H
T ss_pred hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-----------CCEEEEEECCCC-----------------------H
Confidence 357999999999999999999999999998874 478899988855 6
Q ss_pred HHHHhcCcCccceEEEECCCCcEEecc
Q 014225 304 ELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 304 ~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
.+++.|+|.++|++++++ +|+++.+.
T Consensus 68 ~l~~~~~v~~~Pt~~~~~-~G~~~~~~ 93 (109)
T 3f3q_A 68 DVAQKNEVSAMPTLLLFK-NGKEVAKV 93 (109)
T ss_dssp HHHHHTTCCSSSEEEEEE-TTEEEEEE
T ss_pred HHHHHcCCCccCEEEEEE-CCEEEEEE
Confidence 789999999999999996 99988874
No 231
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.51 E-value=2.4e-14 Score=126.68 Aligned_cols=117 Identities=14% Similarity=0.202 Sum_probs=98.5
Q ss_pred hccCCCCccc-C--C---------CC----Cceecccc-cCCcEEEEEEe-ccCChhHH-hhhHHHHHHHHHH-Hhhhhh
Q 014225 202 LTNHDRGYLL-G--H---------PP----DEKVPVSS-LVGKTVGLYFS-ARWCIPCE-KFMPKLLSIYQKI-KQNLVE 261 (428)
Q Consensus 202 ~g~~~p~f~l-~--~---------~g----~~~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~~~l~~l~~~~-~~~~~~ 261 (428)
+|+++|+|++ + . +| + .+++++ ++||++||+|| +.|||.|. .+++.+++.+.+| ++.
T Consensus 3 vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~-~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~--- 78 (182)
T 1xiy_A 3 ENDLIPNVKVMIDVRNMNNISDTDGSPNDFT-SIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKEN--- 78 (182)
T ss_dssp TTCBCCCCEEEEEHHHHTC--------CCEE-EEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTS---
T ss_pred CCCCCCCeEEEcccccccccccccCCCccce-eEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhC---
Confidence 5899999999 7 3 67 6 899999 69999999888 58999999 8999999999999 876
Q ss_pred cCCCCCCEE-EEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHHHhcCcC-----------ccceEEEECCCCcEEec
Q 014225 262 KGDALEDFE-VVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 262 ~~~~~~~~~-iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~ 329 (428)
++. |++||+| +....++|..+.+.-+||++.|.+.++++.||+. ..+.+|||| +|+|++.
T Consensus 79 ------g~~~V~gvS~D-~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~ 150 (182)
T 1xiy_A 79 ------NFDDIYCITNN-DIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKM 150 (182)
T ss_dssp ------CCSEEEEEESS-CHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEE
T ss_pred ------CCcEEEEEeCC-CHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEE
Confidence 784 9999999 6667777877766326999999999999999973 256789998 9999988
Q ss_pred c
Q 014225 330 Q 330 (428)
Q Consensus 330 ~ 330 (428)
.
T Consensus 151 ~ 151 (182)
T 1xiy_A 151 F 151 (182)
T ss_dssp E
T ss_pred E
Confidence 5
No 232
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.51 E-value=4.1e-14 Score=119.43 Aligned_cols=95 Identities=23% Similarity=0.430 Sum_probs=78.1
Q ss_pred ccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcch
Q 014225 223 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 302 (428)
Q Consensus 223 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 302 (428)
..+|++++|+||++||++|+.+.|.|.++++++. ++.++.|++|.+
T Consensus 43 ~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-----------~v~~~~v~~~~~----------------------- 88 (139)
T 3d22_A 43 SRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-----------SLMFLVIDVDEL----------------------- 88 (139)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS-----------------------
T ss_pred hhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CCEEEEEeCccc-----------------------
Confidence 3468999999999999999999999999988873 478999998855
Q ss_pred hHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcCCCC
Q 014225 303 KELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNLPRS 367 (428)
Q Consensus 303 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~~~~ 367 (428)
.++++.|+|.++|+++++ ++|+++.+.. |. + .++|.+.|+++++..+++
T Consensus 89 ~~~~~~~~v~~~Pt~~~~-~~G~~~~~~~-------G~-----~---~~~l~~~l~~~~~~~~~~ 137 (139)
T 3d22_A 89 SDFSASWEIKATPTFFFL-RDGQQVDKLV-------GA-----N---KPELHKKITAILDSLPPS 137 (139)
T ss_dssp HHHHHHTTCCEESEEEEE-ETTEEEEEEE-------SC-----C---HHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHcCCCcccEEEEE-cCCeEEEEEe-------CC-----C---HHHHHHHHHHHhccCCCC
Confidence 678999999999999988 9999987642 21 2 267788888888876654
No 233
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.50 E-value=3.1e-14 Score=128.89 Aligned_cols=117 Identities=18% Similarity=0.258 Sum_probs=93.1
Q ss_pred cccccccCc-c----ccCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHH
Q 014225 37 LLASKDRDY-L----LNQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNA 110 (428)
Q Consensus 37 ~~g~~~pdf-l----~~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~ 110 (428)
.+|++|||| + .+.+|++|+|++++||.|||+|| +.||+.|..++..+++++++|++.| ++|++||.|....
T Consensus 27 ~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g--~~vigiS~Ds~~s- 103 (219)
T 3tue_A 27 KINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELN--CEVLACSIDSEYA- 103 (219)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTT--EEEEEEESSCHHH-
T ss_pred ccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCC--cEEEEeeCCchhh-
Confidence 479999999 4 46788899999999999999999 9999999999999999999999998 9999999997542
Q ss_pred HHHHHhcC----CC--ceec-cCChHHHHHHHhhcCCC----C--CceEEEEcCCCCCCCcccc
Q 014225 111 FNNYRACM----PW--LAVP-YSDLETKKALNRKFDIE----G--IPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 111 ~~~~~~~~----~~--~~~~-~~d~~~~~~l~~~~~v~----~--~P~~~lid~~~~dG~i~~~ 161 (428)
-++|..+. +. +.+| .+|.+ ..++++||+- + .-.+||||+ +|+|...
T Consensus 104 h~~w~~~~~~~~~~~~l~fpllsD~~--~~va~~yGv~~~~~g~~~R~tFiIDp---~g~Ir~~ 162 (219)
T 3tue_A 104 HLQWTLQDRKKGGLGTMAIPILADKT--KNIARSYGVLEESQGVAYRGLFIIDP---HGMLRQI 162 (219)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECT---TSBEEEE
T ss_pred HHHHhhhhHHhcCccccccccccCcc--cHHHHHcCCcccCCCeeEEEEEEECC---CCeEEEE
Confidence 34444321 11 2222 23444 8999999983 2 357999999 9988754
No 234
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.49 E-value=4.2e-14 Score=115.77 Aligned_cols=73 Identities=23% Similarity=0.389 Sum_probs=63.8
Q ss_pred ccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcch
Q 014225 223 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 302 (428)
Q Consensus 223 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 302 (428)
+.++|+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|..
T Consensus 28 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----------~v~~~~vd~d~~----------------------- 73 (116)
T 3qfa_C 28 AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS-----------NVIFLEVDVDDC----------------------- 73 (116)
T ss_dssp HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT-----------TSEEEEEETTTT-----------------------
T ss_pred hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CCEEEEEECCCC-----------------------
Confidence 3468999999999999999999999999888764 478899988855
Q ss_pred hHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 303 KELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 303 ~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
.++++.|+|.++|+++++ ++|+++.+.
T Consensus 74 ~~l~~~~~v~~~Pt~~~~-~~G~~~~~~ 100 (116)
T 3qfa_C 74 QDVASECEVKSMPTFQFF-KKGQKVGEF 100 (116)
T ss_dssp HHHHHHTTCCSSSEEEEE-SSSSEEEEE
T ss_pred HHHHHHcCCccccEEEEE-eCCeEEEEE
Confidence 678999999999999999 899988764
No 235
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.49 E-value=5.6e-14 Score=116.47 Aligned_cols=92 Identities=20% Similarity=0.254 Sum_probs=74.2
Q ss_pred ccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCC
Q 014225 42 DRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPW 120 (428)
Q Consensus 42 ~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~ 120 (428)
++++ ..+.+|........+||+++|+||++||++|+.+.|.|.++++++++ + +.++.|+.|.+..
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~--v~~~~v~~~~d~~----------- 71 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG-K--FNIYYARLEEEKN----------- 71 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS-S--CEEEEEETTSSHH-----------
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC-C--eEEEEEeCCCCch-----------
Confidence 4445 55566655556667899999999999999999999999999999873 3 8899888542222
Q ss_pred ceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 121 LAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 121 ~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..+++.|++.++|+++++++ +|+++..
T Consensus 72 -----------~~~~~~~~v~~~Pt~~~~~~---~G~~~~~ 98 (126)
T 2l57_A 72 -----------IDLAYKYDANIVPTTVFLDK---EGNKFYV 98 (126)
T ss_dssp -----------HHHHHHTTCCSSSEEEEECT---TCCEEEE
T ss_pred -----------HHHHHHcCCcceeEEEEECC---CCCEEEE
Confidence 68899999999999999999 9988654
No 236
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.49 E-value=2.2e-13 Score=110.50 Aligned_cols=72 Identities=25% Similarity=0.478 Sum_probs=64.8
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.+ .+
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~----------~v~~~~vd~~~~-----------------------~~ 62 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD----------KLKIVKIDVDEN-----------------------QE 62 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT----------TCEEEEEETTTC-----------------------CS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC----------CcEEEEEECCCC-----------------------HH
Confidence 689999999999999999999999999998864 489999998865 56
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++|+++++ ++|+++.+.
T Consensus 63 l~~~~~v~~~Pt~~~~-~~G~~~~~~ 87 (112)
T 2voc_A 63 TAGKYGVMSIPTLLVL-KDGEVVETS 87 (112)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEEE
T ss_pred HHHHcCCCcccEEEEE-eCCEEEEEE
Confidence 8999999999999999 999998764
No 237
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.48 E-value=3.9e-14 Score=124.18 Aligned_cols=104 Identities=17% Similarity=0.198 Sum_probs=67.4
Q ss_pred eecccccCCcEEEEEEeccCChhHHhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHH--HHHHhcCCc
Q 014225 218 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSF--ESYFGTMPW 292 (428)
Q Consensus 218 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~--~~~~~~~~~ 292 (428)
.+..+..+||+|+|+|||+||++|+.+.+.+ .++.+.+++. +.++.|++|...+-. ..+......
T Consensus 39 ~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~----------~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 39 GMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINND----------YVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp HHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHH----------CEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred HHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCC----------EEEEEEecCcccccchhhhhhhcchh
Confidence 4455556799999999999999999974444 5555555544 889999998653100 000000001
Q ss_pred cccccCCcchhHH-HHhcCcCccceEEEECCCCcEEeccc
Q 014225 293 LALPFGDPTIKEL-TKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 293 ~~~~~~~d~~~~~-~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
..+....+....+ .+.|+|.++||++|||++|+++.+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~ 148 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSY 148 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCB
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeecc
Confidence 1111111222233 58899999999999999999988754
No 238
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.48 E-value=3e-14 Score=124.49 Aligned_cols=78 Identities=14% Similarity=0.183 Sum_probs=64.7
Q ss_pred cccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCC
Q 014225 220 PVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGD 299 (428)
Q Consensus 220 ~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~ 299 (428)
.+++++|++++|+|||+|||+|+.+.|.|.++++.+. ++.++.|++|.+
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-----------~v~~~~v~~d~~-------------------- 96 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-----------NIELAIISKGRA-------------------- 96 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-----------TEEEEEECHHHH--------------------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-----------CcEEEEEECCCC--------------------
Confidence 4567789999999999999999999999999987753 488888887743
Q ss_pred cchhHHHHhcC---cCccceEEEECCCCcEEeccc
Q 014225 300 PTIKELTKYFD---VQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 300 d~~~~~~~~~~---v~~~P~~~lid~~G~i~~~~~ 331 (428)
.++++.|+ +.++||++++|.+|+++.+.+
T Consensus 97 ---~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~g 128 (167)
T 1z6n_A 97 ---EDDLRQRLALERIAIPLVLVLDEEFNLLGRFV 128 (167)
T ss_dssp ---HHHTTTTTTCSSCCSSEEEEECTTCCEEEEEE
T ss_pred ---HHHHHHHHHcCCCCcCeEEEECCCCCEEEEEc
Confidence 44555665 999999999999999987654
No 239
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.48 E-value=1.3e-14 Score=122.03 Aligned_cols=96 Identities=14% Similarity=0.277 Sum_probs=76.3
Q ss_pred cccccccCc--cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHH---HHHHHHHhcCCCcEEEEEEecCCChHHH
Q 014225 37 LLASKDRDY--LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDEDLNAF 111 (428)
Q Consensus 37 ~~g~~~pdf--l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~ii~vs~D~~~~~~ 111 (428)
..+..+|+| +.+.++....+++.+||+++|+||++||++|+.+.|.+ .+++++++ + +.++.|+++...
T Consensus 5 ~~~~~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~--~~~~~vd~~~~~--- 77 (134)
T 2fwh_A 5 AQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--D--TVLLQANVTAND--- 77 (134)
T ss_dssp -----CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--T--SEEEEEECTTCC---
T ss_pred cccccCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--C--cEEEEEeCCCCc---
Confidence 346778888 55666667778888899999999999999999999999 88888875 2 888888776531
Q ss_pred HHHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcc
Q 014225 112 NNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 159 (428)
Q Consensus 112 ~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~ 159 (428)
+....+++.|++.++|+++++|+ +|+++
T Consensus 78 -----------------~~~~~l~~~~~v~~~Pt~~~~d~---~G~~v 105 (134)
T 2fwh_A 78 -----------------AQDVALLKHLNVLGLPTILFFDG---QGQEH 105 (134)
T ss_dssp -----------------HHHHHHHHHTTCCSSSEEEEECT---TSCBC
T ss_pred -----------------chHHHHHHHcCCCCCCEEEEECC---CCCEe
Confidence 12278999999999999999999 99886
No 240
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.48 E-value=1.4e-13 Score=111.36 Aligned_cols=75 Identities=21% Similarity=0.335 Sum_probs=62.5
Q ss_pred cccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcc
Q 014225 222 SSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 301 (428)
Q Consensus 222 ~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~ 301 (428)
.+..|++++|+||++||++|+.+.|.|.+++++++ ++.++.|+++..
T Consensus 20 ~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-----------~v~~~~vd~~~~---------------------- 66 (111)
T 2pu9_C 20 KAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-----------DVIFLKLDCNQE---------------------- 66 (111)
T ss_dssp TTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSST----------------------
T ss_pred HhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-----------CeEEEEEecCcc----------------------
Confidence 33468999999999999999999999999988774 478888888732
Q ss_pred hhHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 302 IKELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 302 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
..++++.|+|.++||++ ++++|+++.+.
T Consensus 67 ~~~~~~~~~v~~~Pt~~-~~~~G~~~~~~ 94 (111)
T 2pu9_C 67 NKTLAKELGIRVVPTFK-ILKENSVVGEV 94 (111)
T ss_dssp THHHHHHHCCSBSSEEE-EESSSSEEEEE
T ss_pred hHHHHHHcCCCeeeEEE-EEeCCcEEEEE
Confidence 26889999999999955 55999998764
No 241
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.48 E-value=1.8e-13 Score=109.80 Aligned_cols=72 Identities=22% Similarity=0.508 Sum_probs=63.7
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++++++++ ++.++.|+++.+ .+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 65 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQG----------KLTVAKLNIDQN-----------------------PG 65 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TEEEEEEETTTC-----------------------TT
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC----------CcEEEEEECCCC-----------------------HH
Confidence 478999999999999999999999999988864 388999988855 56
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|++.++|+++++ ++|+++.+.
T Consensus 66 ~~~~~~v~~~Pt~~~~-~~G~~~~~~ 90 (108)
T 2trx_A 66 TAPKYGIRGIPTLLLF-KNGEVAATK 90 (108)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHHcCCcccCEEEEE-eCCEEEEEE
Confidence 8899999999999999 899998764
No 242
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.48 E-value=1.4e-13 Score=111.37 Aligned_cols=73 Identities=21% Similarity=0.541 Sum_probs=62.2
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.+++++++.. ++.++.|+++.+ .+
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~---------~~~~~~vd~~~~-----------------------~~ 67 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS---------NVSFLSIDADEN-----------------------SE 67 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT---------TSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC---------CEEEEEEecccC-----------------------HH
Confidence 4789999999999999999999999999887533 689999998865 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++|+++++ ++|+++.+.
T Consensus 68 ~~~~~~v~~~Pt~~~~-~~G~~~~~~ 92 (112)
T 3d6i_A 68 ISELFEISAVPYFIII-HKGTILKEL 92 (112)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHHcCCCcccEEEEE-ECCEEEEEe
Confidence 8999999999999999 799998864
No 243
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=1.2e-13 Score=114.87 Aligned_cols=101 Identities=17% Similarity=0.271 Sum_probs=76.4
Q ss_pred eecccccCCcEEEEEEeccCChhHHhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccc
Q 014225 218 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLA 294 (428)
Q Consensus 218 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~ 294 (428)
.+.++..+||+++|+||++||++|+.+.|.+ ..+.+.+... +.++.|+++.+
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~----------~~~~~vd~~~~--------------- 73 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH----------FVNLKMDMEKG--------------- 73 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH----------SEEEEECSSST---------------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC----------eEEEEEecCCc---------------
Confidence 4555556789999999999999999999998 6666666544 66777776642
Q ss_pred cccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhc
Q 014225 295 LPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 295 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
....+++.|+|.++|+++++|++|+++.+..+ . .+ .++|.+.|++.+..
T Consensus 74 ------~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G-------~----~~---~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 74 ------EGVELRKKYGVHAYPTLLFINSSGEVVYRLVG-------A----ED---APELLKKVKLGVES 122 (130)
T ss_dssp ------THHHHHHHTTCCSSCEEEEECTTSCEEEEEES-------C----CC---HHHHHHHHHHHHSC
T ss_pred ------chHHHHHHcCCCCCCEEEEECCCCcEEEEecC-------C----CC---HHHHHHHHHHHHHh
Confidence 13789999999999999999999999876432 1 12 25667777776653
No 244
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.47 E-value=8.6e-14 Score=111.99 Aligned_cols=72 Identities=17% Similarity=0.351 Sum_probs=60.2
Q ss_pred cCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhh
Q 014225 58 DLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRK 137 (428)
Q Consensus 58 ~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 137 (428)
+.++|+|+|+|||+||+||+.+.|.+.++++.+++ +.++.|++|.. ..+++.
T Consensus 17 ~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~----~~~~~vd~d~~------------------------~~l~~~ 68 (105)
T 3zzx_A 17 EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD----VVFLKVDVDEC------------------------EDIAQD 68 (105)
T ss_dssp HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----EEEEEEETTTC------------------------HHHHHH
T ss_pred hcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC----eEEEEEecccC------------------------HHHHHH
Confidence 34579999999999999999999999999988753 66777666543 678999
Q ss_pred cCCCCCceEEEEcCCCCCCCcccc
Q 014225 138 FDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 138 ~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
|+|.++||++++. +|+.+.+
T Consensus 69 ~~V~~~PT~~~~~----~G~~v~~ 88 (105)
T 3zzx_A 69 NQIACMPTFLFMK----NGQKLDS 88 (105)
T ss_dssp TTCCBSSEEEEEE----TTEEEEE
T ss_pred cCCCeecEEEEEE----CCEEEEE
Confidence 9999999988885 8987754
No 245
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.47 E-value=1.3e-13 Score=114.83 Aligned_cols=90 Identities=18% Similarity=0.358 Sum_probs=72.9
Q ss_pred ccccCccccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCC
Q 014225 40 SKDRDYLLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMP 119 (428)
Q Consensus 40 ~~~pdfl~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~ 119 (428)
..+|++ ...+++.++....+||+++|+||++||++|+.+.|.+.+++++++++ +.++.|++|..
T Consensus 22 ~~~~~~-~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---v~~~~vd~d~~------------ 85 (128)
T 3ul3_B 22 KKVPRL-QQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR---IYLLKVDLDKN------------ 85 (128)
T ss_dssp ----CC-CCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---EEEEEEEGGGC------------
T ss_pred ccCCcc-ccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEECCCC------------
Confidence 344553 34567677778889999999999999999999999999999999864 88888877654
Q ss_pred CceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 120 WLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 120 ~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..+++.|++.++|+++++ + +|+++.+
T Consensus 86 ------------~~l~~~~~v~~~Pt~~~~-~---~G~~~~~ 111 (128)
T 3ul3_B 86 ------------ESLARKFSVKSLPTIILL-K---NKTMLAR 111 (128)
T ss_dssp ------------HHHHHHTTCCSSSEEEEE-E---TTEEEEE
T ss_pred ------------HHHHHHcCCCCcCEEEEE-E---CCEEEEE
Confidence 678899999999999999 4 7877654
No 246
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.47 E-value=1.3e-13 Score=110.67 Aligned_cols=73 Identities=23% Similarity=0.402 Sum_probs=65.1
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchh
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 303 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 303 (428)
..+++++|+||++||++|+.+.|.|.++.++++++ +.++.|++|.+ .
T Consensus 19 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~-----------------------~ 65 (109)
T 3tco_A 19 RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK----------AVFGRLNVDEN-----------------------Q 65 (109)
T ss_dssp HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT----------SEEEEEETTTC-----------------------H
T ss_pred hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC----------ceEEEEccccC-----------------------H
Confidence 35899999999999999999999999999988754 78899988865 6
Q ss_pred HHHHhcCcCccceEEEECCCCcEEecc
Q 014225 304 ELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 304 ~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
.+++.|++.++|+++++ ++|+++.+.
T Consensus 66 ~~~~~~~i~~~Pt~~~~-~~g~~~~~~ 91 (109)
T 3tco_A 66 KIADKYSVLNIPTTLIF-VNGQLVDSL 91 (109)
T ss_dssp HHHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHHhcCcccCCEEEEE-cCCcEEEee
Confidence 78999999999999999 999998874
No 247
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.47 E-value=1.1e-13 Score=115.71 Aligned_cols=71 Identities=17% Similarity=0.234 Sum_probs=64.7
Q ss_pred cEEEEEEeccCC--hhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 227 KTVGLYFSARWC--IPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 227 k~vll~F~a~wC--~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
++|||+|||+|| ++|+.+.|.|.++.++|.++ +.++.|++|.+ .+
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~----------v~~~KVdvDe~-----------------------~~ 80 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR----------LVAAEVAAEAE-----------------------RG 80 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT----------EEEEEECGGGH-----------------------HH
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC----------cEEEEEECCCC-----------------------HH
Confidence 499999999999 99999999999999999755 88999988854 78
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
++..|+|+++||++++ ++|+++.+..
T Consensus 81 la~~ygV~siPTlilF-kdG~~v~~~v 106 (137)
T 2qsi_A 81 LMARFGVAVCPSLAVV-QPERTLGVIA 106 (137)
T ss_dssp HHHHHTCCSSSEEEEE-ECCEEEEEEE
T ss_pred HHHHcCCccCCEEEEE-ECCEEEEEEe
Confidence 9999999999999999 9999999843
No 248
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.47 E-value=1.4e-13 Score=118.02 Aligned_cols=69 Identities=22% Similarity=0.297 Sum_probs=61.3
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++|+|+|||+||++|+.+.|.|.+++++++++ +.++.|++|.. .+
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~----------~~~~~vd~d~~-----------------------~~ 68 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM----------AAIYLVDVDQT-----------------------AV 68 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT----------EEEEEEETTTC-----------------------CH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc----------eEEEEEECCcC-----------------------HH
Confidence 4799999999999999999999999999888643 88999998755 67
Q ss_pred HHHhcCcCccceEEEECCCCcEE
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTV 327 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~ 327 (428)
+++.|+|.++||++++ ++|+++
T Consensus 69 l~~~~~v~~~Pt~~~~-~~G~~v 90 (149)
T 3gix_A 69 YTQYFDISYIPSTVFF-FNGQHM 90 (149)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEE
T ss_pred HHHHcCCCccCeEEEE-ECCeEE
Confidence 8999999999999955 899988
No 249
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.47 E-value=7.3e-14 Score=122.33 Aligned_cols=118 Identities=17% Similarity=0.199 Sum_probs=93.0
Q ss_pred cccccccCc-cccCCC----------CEEecccC-CCC-EEEEEEecCCChhhhh-hHHHHHHHHHHHhcCCCcE-EEEE
Q 014225 37 LLASKDRDY-LLNQHG----------TQVKVSDL-EGK-VTALYFSANWYPPCGN-FTGVLVDVYEELRNNGSDF-EVVF 101 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G----------~~v~l~~~-~gk-~vlv~F~a~wC~~C~~-~~p~l~~l~~~~~~~~~~~-~ii~ 101 (428)
++|+.+|+. +....+ ++++|+++ +|| +||++||+.|||+|.. ++|.+++.+++|++.| + +|++
T Consensus 11 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g--~d~Vig 88 (176)
T 4f82_A 11 QVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG--IDEIWC 88 (176)
T ss_dssp CTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCEEEE
T ss_pred hcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC--CCEEEE
Confidence 478999997 543322 57999997 998 5566888999999999 9999999999999988 8 9999
Q ss_pred EecCCChHHHHHHHhcCCCc--eeccCChHHHHHHHhhcCCC-----------CCceEEEEcCCCCCCCcccccc
Q 014225 102 VSSDEDLNAFNNYRACMPWL--AVPYSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHDG 163 (428)
Q Consensus 102 vs~D~~~~~~~~~~~~~~~~--~~~~~d~~~~~~l~~~~~v~-----------~~P~~~lid~~~~dG~i~~~~~ 163 (428)
||.|. ....++|.++.+.. ....+|.+ ..++++||+. ..++++|| + +|+|++...
T Consensus 89 IS~D~-~~~~~~f~~~~~l~~~f~lLsD~~--~~va~ayGv~~~~~~~G~g~~s~R~tfII-~---dG~I~~~~~ 156 (176)
T 4f82_A 89 VSVND-AFVMGAWGRDLHTAGKVRMMADGS--AAFTHALGLTQDLSARGMGIRSLRYAMVI-D---GGVVKTLAV 156 (176)
T ss_dssp EESSC-HHHHHHHHHHTTCTTTSEEEECTT--CHHHHHHTCEEECGGGTCCEEECCEEEEE-E---TTEEEEEEE
T ss_pred EeCCC-HHHHHHHHHHhCCCCCceEEEcCc--hHHHHHhCCCccccccCCCcccccEEEEE-c---CCEEEEEEE
Confidence 99985 56688888877653 22334544 7899999873 25889999 8 999987643
No 250
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.46 E-value=2.7e-13 Score=109.68 Aligned_cols=72 Identities=26% Similarity=0.467 Sum_probs=63.4
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.+ .+
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 68 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD----------KIEIVKLNIDEN-----------------------PG 68 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC----------CeEEEEEEcCCC-----------------------HH
Confidence 478999999999999999999999999988864 388999998865 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++|+++++ ++|+++.+.
T Consensus 69 ~~~~~~v~~~Pt~~~~-~~G~~~~~~ 93 (112)
T 1t00_A 69 TAAKYGVMSIPTLNVY-QGGEVAKTI 93 (112)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHhCCCCcccEEEEE-eCCEEEEEE
Confidence 8999999999999888 899998764
No 251
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.46 E-value=3.6e-14 Score=119.04 Aligned_cols=92 Identities=8% Similarity=0.034 Sum_probs=73.1
Q ss_pred CCcEEEEEEeccC--ChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcch
Q 014225 225 VGKTVGLYFSARW--CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 302 (428)
Q Consensus 225 ~gk~vll~F~a~w--C~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 302 (428)
.+++|||+|||+| |++|+.+.|.|.++.++|.++ .+.|+.|++|.+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~---------~v~~~KVdvDe~----------------------- 80 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDY---------TWQVAIADLEQS----------------------- 80 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTS---------CCEEEECCHHHH-----------------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCC---------eEEEEEEECCCC-----------------------
Confidence 4567899999999 999999999999999998643 278888888744
Q ss_pred hHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhc
Q 014225 303 KELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 303 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
.+++..|||+++||++++ ++|+++.+.. |.. .. ++|.+.|++.+..
T Consensus 81 ~~lA~~ygV~sIPTlilF-k~G~~v~~~~-------G~~----~k---~~l~~~i~~~l~~ 126 (140)
T 2qgv_A 81 EAIGDRFGAFRFPATLVF-TGGNYRGVLN-------GIH----PW---AELINLMRGLVEP 126 (140)
T ss_dssp HHHHHHHTCCSSSEEEEE-ETTEEEEEEE-------SCC----CH---HHHHHHHHHHHC-
T ss_pred HHHHHHcCCccCCEEEEE-ECCEEEEEEe-------cCC----CH---HHHHHHHHHHhcC
Confidence 789999999999999999 9999998843 322 22 4566667766643
No 252
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.46 E-value=2.3e-13 Score=113.47 Aligned_cols=72 Identities=21% Similarity=0.457 Sum_probs=63.8
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.+ .+
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----------~v~~~~vd~~~~-----------------------~~ 85 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQG----------KLTVAKLNIDQN-----------------------PG 85 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT----------TEEEEEEETTTC-----------------------CT
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC----------CeEEEEEECCCC-----------------------HH
Confidence 579999999999999999999999999988864 389999998865 46
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++|+++++ ++|+++.+.
T Consensus 86 l~~~~~v~~~Pt~~~~-~~G~~~~~~ 110 (128)
T 2o8v_B 86 TAPKYGIRGIPTLLLF-KNGEVAATK 110 (128)
T ss_dssp TSGGGTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHHcCCCccCEEEEE-eCCEEEEEE
Confidence 7889999999999999 999998764
No 253
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.46 E-value=1.4e-13 Score=110.35 Aligned_cols=71 Identities=15% Similarity=0.285 Sum_probs=55.3
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.+.++++++. ++.++.|++|.+ .+
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-----------~~~~~~vd~~~~-----------------------~~ 62 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-----------YVEKIEILLQDM-----------------------QE 62 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-----------TEEEEEEEECCC-------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-----------CceEEEEECCCC-----------------------HH
Confidence 57999999999999999999999999998773 589999998865 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++||++++ ++|+++.+.
T Consensus 63 l~~~~~v~~~Pt~~~~-~~G~~~~~~ 87 (105)
T 4euy_A 63 IAGRYAVFTGPTVLLF-YNGKEILRE 87 (105)
T ss_dssp -------CCCCEEEEE-ETTEEEEEE
T ss_pred HHHhcCCCCCCEEEEE-eCCeEEEEE
Confidence 8899999999999999 699998764
No 254
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.46 E-value=1e-14 Score=127.24 Aligned_cols=111 Identities=17% Similarity=0.313 Sum_probs=76.7
Q ss_pred eecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCcccccc
Q 014225 218 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 297 (428)
Q Consensus 218 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~ 297 (428)
.+.....+||+|+|+||++||++|+.+.|.|.++.+.+... +.++.|++|.+.
T Consensus 38 ~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~----------~~~~~v~~d~~~----------------- 90 (164)
T 1sen_A 38 GKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELS----------HNFVMVNLEDEE----------------- 90 (164)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH----------TTSEEEEEEGGG-----------------
T ss_pred HHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC----------CeEEEEEecCCc-----------------
Confidence 55566677999999999999999999999999987665543 567888877442
Q ss_pred CCcchhHHHHhcCc--CccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 298 GDPTIKELTKYFDV--QGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 298 ~~d~~~~~~~~~~v--~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
..+...|++ .++||++++|++|+++.+..+. .+...|.+.....++|.+.|++++...
T Consensus 91 -----~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~----~~~~~~~~~~~~~~~l~~~l~~~l~~~ 150 (164)
T 1sen_A 91 -----EPKDEDFSPDGGYIPRILFLDPSGKVHPEIINE----NGNPSYKYFYVSAEQVVQGMKEAQERL 150 (164)
T ss_dssp -----SCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCT----TSCTTSTTCCCSHHHHHHHHHHHHHHH
T ss_pred -----hHHHHHhcccCCcCCeEEEECCCCCEEEEEeCC----CCccchhcccCCHHHHHHHHHHHHHhc
Confidence 114556777 6799999999999998764331 111122222233466667776666543
No 255
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.46 E-value=2.8e-13 Score=108.12 Aligned_cols=72 Identities=21% Similarity=0.389 Sum_probs=64.5
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.+.+++++++++ +.++.|++|.+ .+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~-----------------------~~ 64 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK----------ADILKLDVDEN-----------------------PS 64 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT----------CEEEEEETTTC-----------------------HH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC----------cEEEEEECCcC-----------------------HH
Confidence 7899999999999999999999999999998754 88999998865 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|++.++|+++++ ++|+++.+.
T Consensus 65 ~~~~~~v~~~Pt~~~~-~~G~~~~~~ 89 (106)
T 3die_A 65 TAAKYEVMSIPTLIVF-KDGQPVDKV 89 (106)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEEE
T ss_pred HHHhCCCcccCEEEEE-eCCeEEEEE
Confidence 8999999999999999 599988764
No 256
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.45 E-value=3.3e-13 Score=108.08 Aligned_cols=72 Identities=24% Similarity=0.467 Sum_probs=63.3
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.+ .+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~----------~~~~~v~~~~~-----------------------~~ 64 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK----------LKCVKLNTDES-----------------------PN 64 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT----------CEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc----------eEEEEEECCCC-----------------------HH
Confidence 4789999999999999999999999999888643 88999998865 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|++.++|+++++ ++|+++.+.
T Consensus 65 ~~~~~~v~~~Pt~~~~-~~G~~~~~~ 89 (107)
T 1dby_A 65 VASEYGIRSIPTIMVF-KGGKKCETI 89 (107)
T ss_dssp HHHHHTCCSSCEEEEE-SSSSEEEEE
T ss_pred HHHHCCCCcCCEEEEE-eCCEEEEEE
Confidence 8899999999999888 899998764
No 257
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.45 E-value=2.8e-13 Score=112.24 Aligned_cols=71 Identities=27% Similarity=0.509 Sum_probs=62.8
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
++++++|+||++||++|+.+.|.|.++++++. ++.++.|++|.+ .+
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-----------~v~~~~vd~d~~-----------------------~~ 82 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-----------NVLFLKVDTDEL-----------------------KS 82 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-----------SEEEEEEETTTS-----------------------HH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CcEEEEEECccC-----------------------HH
Confidence 58999999999999999999999999988764 488999988754 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++|+++++ ++|+++.+.
T Consensus 83 l~~~~~v~~~Pt~~~~-~~G~~~~~~ 107 (124)
T 1xfl_A 83 VASDWAIQAMPTFMFL-KEGKILDKV 107 (124)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHHcCCCccCEEEEE-ECCEEEEEE
Confidence 8999999999998888 899998764
No 258
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=5.4e-13 Score=111.25 Aligned_cols=95 Identities=15% Similarity=0.268 Sum_probs=73.5
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.+++++++... ..++.++.|+++.+ ..
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~------~~~~~~~~vd~~~~-----------------------~~ 74 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQT------KGKVKLAAVDATVN-----------------------QV 74 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHT------TTSEEEEEEETTTC-----------------------CH
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhc------CCcEEEEEEECCCC-----------------------HH
Confidence 47899999999999999999999999999997310 12588888888754 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
+++.|+|.++|+++++++ |+++.+..+ ..+ .++|.+.|++++..
T Consensus 75 l~~~~~v~~~Pt~~~~~~-g~~~~~~~G-----------~~~---~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 75 LASRYGIRGFPTIKIFQK-GESPVDYDG-----------GRT---RSDIVSRALDLFSD 118 (133)
T ss_dssp HHHHHTCCSSSEEEEEET-TEEEEEECS-----------CCS---HHHHHHHHHHHHHH
T ss_pred HHHhCCCCeeCeEEEEeC-CCceEEecC-----------CCC---HHHHHHHHHHHhhc
Confidence 899999999999999976 877665322 112 35667777776654
No 259
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.45 E-value=6.1e-14 Score=120.28 Aligned_cols=104 Identities=12% Similarity=0.168 Sum_probs=77.3
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHHHHHHH--HHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcc
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQ--KIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 301 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~--~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~ 301 (428)
..||+|+|+|||+||++|+.+.|.+.+..+ .+.. ..++.|.+|.+.
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~-----------~~fv~V~vD~e~--------------------- 89 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ-----------NKFIMLNLMHET--------------------- 89 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH-----------HTCEEEEESSCC---------------------
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh-----------cCeEEEEecCCc---------------------
Confidence 458999999999999999999999886422 2222 235667776331
Q ss_pred hhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 302 IKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 302 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
.++...|++.++||++++|++|+++.+..| .++...|+......+++.+.++++++..
T Consensus 90 -~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G----~~~~~~~~~~~~~~~~ll~~~~~al~~~ 147 (151)
T 3ph9_A 90 -TDKNLSPDGQYVPRIMFVDPSLTVRADIAG----RYSNRLYTYEPRDLPLLIENMKKALRLI 147 (151)
T ss_dssp -SCGGGCTTCCCSSEEEEECTTSCBCTTCCC----SCTTSTTCCCGGGHHHHHHHHHHHHSCC
T ss_pred -hhhHhhcCCCCCCEEEEECCCCCEEEEEeC----CcCCcccccchhhHHHHHHHHHHHHHHH
Confidence 234567899999999999999999987544 3344556777888889999998887643
No 260
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.45 E-value=1.7e-13 Score=109.40 Aligned_cols=72 Identities=26% Similarity=0.472 Sum_probs=63.8
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++.++++++ +.++.|++|.+ .+
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~----------v~~~~v~~~~~-----------------------~~ 62 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK----------VTVAKLNVDEN-----------------------PE 62 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT----------CEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC----------cEEEEEECcCC-----------------------HH
Confidence 4689999999999999999999999999887643 88999998865 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|++.++|+++++ ++|+++.+.
T Consensus 63 ~~~~~~v~~~Pt~~~~-~~G~~~~~~ 87 (105)
T 1nsw_A 63 TTSQFGIMSIPTLILF-KGGRPVKQL 87 (105)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHHcCCccccEEEEE-eCCeEEEEE
Confidence 8999999999999999 999988764
No 261
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.45 E-value=3.8e-13 Score=111.90 Aligned_cols=94 Identities=21% Similarity=0.308 Sum_probs=73.0
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++++++++. +.++.|++|.+ ..
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~----------~~~~~vd~~~~-----------------------~~ 80 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV----------VKVGAVNADKH-----------------------QS 80 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT----------SEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc----------eEEEEEeCCCC-----------------------HH
Confidence 4689999999999999999999999999988643 78888888755 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcCC
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNLP 365 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~~ 365 (428)
+++.|+|.++|++++++++|+++.+..+ ..+ .++|.+.|.+.+...+
T Consensus 81 l~~~~~v~~~Pt~~~~~~~~~~~~~~~G-----------~~~---~~~l~~~l~~~l~~~~ 127 (130)
T 2dml_A 81 LGGQYGVQGFPTIKIFGANKNKPEDYQG-----------GRT---GEAIVDAALSALRSGP 127 (130)
T ss_dssp HHHHHTCCSSSEEEEESSCTTSCEECCS-----------CCS---HHHHHHHHHHHHHHSS
T ss_pred HHHHcCCCccCEEEEEeCCCCeEEEeec-----------CCC---HHHHHHHHHHHHhcCC
Confidence 8999999999999999988873333211 112 3556777777665443
No 262
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.45 E-value=3.1e-13 Score=110.96 Aligned_cols=72 Identities=25% Similarity=0.493 Sum_probs=63.6
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++++++.. ++.++.|++|.+ .+
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~----------~v~~~~vd~d~~-----------------------~~ 76 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG----------KVVMAKVDIDDH-----------------------TD 76 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------SSEEEEEETTTT-----------------------HH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CeEEEEEeCCCC-----------------------HH
Confidence 478999999999999999999999999988754 488999998855 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++|+++++ ++|+++.+.
T Consensus 77 l~~~~~v~~~Pt~~~~-~~G~~~~~~ 101 (119)
T 1w4v_A 77 LAIEYEVSAVPTVLAM-KNGDVVDKF 101 (119)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHHcCCCcccEEEEE-eCCcEEEEE
Confidence 8999999999999999 899998764
No 263
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.45 E-value=4.4e-13 Score=107.62 Aligned_cols=71 Identities=14% Similarity=0.232 Sum_probs=62.7
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++++++. ++.++.|++|.+ .+
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-----------~~~~~~vd~~~~-----------------------~~ 65 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-----------QAVFLEVDVHQC-----------------------QG 65 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS-----------------------HH
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-----------CcEEEEEECccC-----------------------HH
Confidence 57899999999999999999999999998873 478999998865 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++||++++ ++|+++.+.
T Consensus 66 ~~~~~~v~~~Pt~~~~-~~G~~~~~~ 90 (107)
T 1gh2_A 66 TAATNNISATPTFQFF-RNKVRIDQY 90 (107)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHhcCCCcccEEEEE-ECCeEEEEE
Confidence 8899999999999999 899988764
No 264
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.45 E-value=2.6e-14 Score=123.28 Aligned_cols=104 Identities=14% Similarity=0.296 Sum_probs=78.4
Q ss_pred cccccccCccccCCCCEEecccCCCCEEEEEEe-cCCChhhhhhHHHH---HHHHHHHhcCCCcEEEEEEecCCChHHHH
Q 014225 37 LLASKDRDYLLNQHGTQVKVSDLEGKVTALYFS-ANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDEDLNAFN 112 (428)
Q Consensus 37 ~~g~~~pdfl~~~~G~~v~l~~~~gk~vlv~F~-a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~ii~vs~D~~~~~~~ 112 (428)
.++...++| +..|+.+.++..+||+++|+|| ++||++|+.++|.| .++.+.+... +.++.|+.+....
T Consensus 25 ~~~~~~~~~--~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~---~~~v~vd~~~~~~--- 96 (154)
T 2ju5_A 25 PIAAANLQW--ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVH---LHMVEVDFPQKNH--- 96 (154)
T ss_dssp SSCCCCCCE--ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHH---CEEEEEECCSSCC---
T ss_pred hcccCCCCC--CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCc---EEEEEecCccccC---
Confidence 344445555 4456678888889999999999 99999999999999 7776655443 8888887766531
Q ss_pred HHHhcCCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 113 NYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 113 ~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+++...+....+++.|++.++|+++|+|+ +|+++.+
T Consensus 97 ----------~~~~~~~~~~~l~~~~~v~~~Pt~~~~d~---~G~~~~~ 132 (154)
T 2ju5_A 97 ----------QPEEQRQKNQELKAQYKVTGFPELVFIDA---EGKQLAR 132 (154)
T ss_dssp ----------CCHHHHHHHHHHHHHTTCCSSSEEEEECT---TCCEEEE
T ss_pred ----------CChhhHhhHHHHHHHcCCCCCCEEEEEcC---CCCEEEE
Confidence 11112233478999999999999999999 9998865
No 265
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.45 E-value=4.5e-13 Score=107.99 Aligned_cols=90 Identities=21% Similarity=0.419 Sum_probs=72.6
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.+.++.++++++ +.++.|++|.+ ..
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~----------v~~~~vd~~~~-----------------------~~ 67 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES----------FGFYYVDVEEE-----------------------KT 67 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT----------SEEEEEETTTC-----------------------HH
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc----------eEEEEEECCcC-----------------------hh
Confidence 4689999999999999999999999999988643 88999998865 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
+++.|+|.++|+++++ ++|+++.+..+ ..+ .++|.+.|++++.
T Consensus 68 l~~~~~v~~~Pt~~~~-~~g~~~~~~~g-----------~~~---~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 68 LFQRFSLKGVPQILYF-KDGEYKGKMAG-----------DVE---DDEVEQMIADVLE 110 (111)
T ss_dssp HHHHTTCCSSCEEEEE-ETTEEEEEEES-----------SCC---HHHHHHHHHHHHH
T ss_pred HHHhcCCCcCCEEEEE-ECCEEEEEEec-----------cCC---HHHHHHHHHHHhc
Confidence 8999999999999999 89988866432 122 2556666666554
No 266
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.45 E-value=4.4e-13 Score=113.02 Aligned_cols=105 Identities=26% Similarity=0.354 Sum_probs=77.6
Q ss_pred CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCC
Q 014225 212 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 291 (428)
Q Consensus 212 ~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~ 291 (428)
..++. .+...-..+++++|+||++||++|+.+.|.|.++++++++. +.++.++.|+++.+
T Consensus 21 ~l~~~-~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-------~~~v~~~~vd~~~~------------ 80 (140)
T 2dj1_A 21 VLNDG-NFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDN-------DPPIAVAKIDATSA------------ 80 (140)
T ss_dssp ECCTT-THHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSS-------SSCCEEEEECTTTC------------
T ss_pred EcChH-hHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhcc-------CCceEEEEEeCccc------------
Confidence 33444 44332235799999999999999999999999999999865 33477777776644
Q ss_pred ccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhc
Q 014225 292 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 292 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
..+++.|+|.++|+++++ ++|++....|. .+ .++|.+.|++++..
T Consensus 81 -----------~~~~~~~~v~~~Pt~~~~-~~G~~~~~~g~------------~~---~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 81 -----------SMLASKFDVSGYPTIKIL-KKGQAVDYDGS------------RT---QEEIVAKVREVSQP 125 (140)
T ss_dssp -----------HHHHHHTTCCSSSEEEEE-ETTEEEECCSC------------CC---HHHHHHHHHHHHSS
T ss_pred -----------HHHHHHCCCCccCeEEEE-ECCcEEEcCCC------------CC---HHHHHHHHHHhcCC
Confidence 678999999999999999 88984433221 22 35677777777764
No 267
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.44 E-value=5.8e-13 Score=107.94 Aligned_cols=90 Identities=20% Similarity=0.399 Sum_probs=73.2
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++.+.++++ +.++.|++|.+ ..
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~----------v~~~~v~~~~~-----------------------~~ 70 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR----------LKVVKLEIDPN-----------------------PT 70 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT----------CEEEEEESTTC-----------------------HH
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc----------EEEEEEEcCCC-----------------------HH
Confidence 5789999999999999999999999999888643 89999998865 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
+++.|+|.++|+++++ ++|+++.+..+ . .+ .++|.+.|+++++
T Consensus 71 ~~~~~~v~~~Pt~~~~-~~G~~~~~~~g-------~----~~---~~~l~~~l~~~l~ 113 (115)
T 1thx_A 71 TVKKYKVEGVPALRLV-KGEQILDSTEG-------V----IS---KDKLLSFLDTHLN 113 (115)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEEES-------C----CC---HHHHHHHHHHHHC
T ss_pred HHHHcCCCceeEEEEE-cCCEEEEEecC-------C----CC---HHHHHHHHHHHhc
Confidence 8999999999999999 99999876422 1 12 2556666766654
No 268
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.44 E-value=3.3e-13 Score=114.71 Aligned_cols=71 Identities=18% Similarity=0.269 Sum_probs=62.5
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++|+|+|||+||++|+.+.|.|.++++++++ ++.++.|++|.+ .+
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----------~v~~~~vd~d~~-----------------------~~ 68 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN----------FAVIYLVDITEV-----------------------PD 68 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT----------TEEEEEEETTTC-----------------------CT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC----------CeEEEEEccccC-----------------------HH
Confidence 479999999999999999999999999998864 389999998855 45
Q ss_pred HHHhcCcCccceEEEECCCCcEEec
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~ 329 (428)
+++.|+|.++||++++ ++|+++..
T Consensus 69 ~~~~~~i~~~Pt~~~~-~~G~~v~~ 92 (142)
T 1qgv_A 69 FNKMYELYDPCTVMFF-FRNKHIMI 92 (142)
T ss_dssp TTTSSCSCSSCEEEEE-ETTEEEEE
T ss_pred HHHHcCCCCCCEEEEE-ECCcEEEE
Confidence 7889999999999999 68888764
No 269
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.44 E-value=1.4e-13 Score=115.59 Aligned_cols=94 Identities=17% Similarity=0.282 Sum_probs=70.2
Q ss_pred ecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccC
Q 014225 219 VPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFG 298 (428)
Q Consensus 219 v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~ 298 (428)
-.+++.+||+++|+||++||++|+.+.|.|.++.+++ ++.++.|++|..
T Consensus 33 ~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~------------~v~~~~vd~~~~------------------- 81 (133)
T 3cxg_A 33 QVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY------------YVTLVDIDVDIH------------------- 81 (133)
T ss_dssp HHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE------------ECEEEEEETTTC-------------------
T ss_pred HHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc------------CEEEEEEeccch-------------------
Confidence 3456667899999999999999999999998876554 267777777654
Q ss_pred CcchhHHHHhcCcCccceEEEE-CCCCc--EEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 299 DPTIKELTKYFDVQGIPCLVII-GPEGK--TVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 299 ~d~~~~~~~~~~v~~~P~~~li-d~~G~--i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
.++++.|+|.++||++++ |++|+ ++.+.. |. + .++|.+.|++++.
T Consensus 82 ----~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~-------G~-----~---~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 82 ----PKLNDQHNIKALPTFEFYFNLNNEWVLVHTVE-------GA-----N---QNDIEKAFQKYCL 129 (133)
T ss_dssp ----HHHHHHTTCCSSSEEEEEEEETTEEEEEEEEE-------SC-----C---HHHHHHHHHHHSE
T ss_pred ----HHHHHhcCCCCCCEEEEEEecCCCeEEEEEEc-------CC-----C---HHHHHHHHHHHHH
Confidence 678999999999999999 45666 776632 21 2 2567777776654
No 270
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.43 E-value=3.4e-13 Score=107.52 Aligned_cols=73 Identities=25% Similarity=0.432 Sum_probs=63.8
Q ss_pred ccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcch
Q 014225 223 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 302 (428)
Q Consensus 223 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 302 (428)
+.++++++|+||++||++|+.+.|.+.++.++++ ++.++.|++|..
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-----------~~~~~~vd~~~~----------------------- 62 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-----------NVIFLEVDVDDC----------------------- 62 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-----------TSEEEEEETTTC-----------------------
T ss_pred hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-----------CeEEEEEEhhhh-----------------------
Confidence 3468999999999999999999999999988774 478898988755
Q ss_pred hHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 303 KELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 303 ~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
..+++.|++.++|+++++ ++|+++.+.
T Consensus 63 ~~~~~~~~v~~~Pt~~~~-~~g~~~~~~ 89 (105)
T 3m9j_A 63 QDVASESEVKSMPTFQFF-KKGQKVGEF 89 (105)
T ss_dssp HHHHHHTTCCBSSEEEEE-ETTEEEEEE
T ss_pred HHHHHHcCCCcCcEEEEE-ECCeEEEEE
Confidence 678999999999999999 889888764
No 271
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.43 E-value=4.7e-13 Score=108.13 Aligned_cols=71 Identities=17% Similarity=0.377 Sum_probs=62.4
Q ss_pred CcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHH
Q 014225 226 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 305 (428)
Q Consensus 226 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 305 (428)
+++++|+||++||++|+.+.|.|.++.+++.+ ++.++.|++|.+ .++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~vd~~~~-----------------------~~~ 70 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG----------KVIFLKVDVDAV-----------------------AAV 70 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TSEEEEEETTTT-----------------------HHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC----------CeEEEEEECCch-----------------------HHH
Confidence 78899999999999999999999999988763 488999988754 678
Q ss_pred HHhcCcCccceEEEECCCCcEEecc
Q 014225 306 TKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 306 ~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
++.|+|.++|+++++ ++|+++.+.
T Consensus 71 ~~~~~v~~~Pt~~~~-~~G~~~~~~ 94 (112)
T 1ep7_A 71 AEAAGITAMPTFHVY-KDGVKADDL 94 (112)
T ss_dssp HHHHTCCBSSEEEEE-ETTEEEEEE
T ss_pred HHHcCCCcccEEEEE-ECCeEEEEE
Confidence 999999999998877 899998763
No 272
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.43 E-value=6.1e-13 Score=114.76 Aligned_cols=90 Identities=16% Similarity=0.340 Sum_probs=73.2
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|+++++++.++ +.++.|++|.+ ..
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~----------v~~~~vd~~~~-----------------------~~ 109 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ----------VRLAKIDTQAH-----------------------PA 109 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------CEEEEEETTTS-----------------------TH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC----------EEEEEEeCCcc-----------------------HH
Confidence 5789999999999999999999999999998654 88999998855 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
+++.|+|.++|+++++ ++|+++.+..+ . .+ .++|.+.|++++.
T Consensus 110 l~~~~~i~~~Pt~~~~-~~G~~~~~~~G-------~----~~---~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 110 VAGRHRIQGIPAFILF-HKGRELARAAG-------A----RP---ASELVGFVRGKLG 152 (155)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEEES-------C----CC---HHHHHHHHHHHHC
T ss_pred HHHHcCCCcCCEEEEE-eCCeEEEEecC-------C----CC---HHHHHHHHHHHhc
Confidence 8999999999999999 89999876432 1 12 2556666666654
No 273
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=7.3e-13 Score=109.65 Aligned_cols=69 Identities=17% Similarity=0.331 Sum_probs=60.6
Q ss_pred cEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHH
Q 014225 227 KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELT 306 (428)
Q Consensus 227 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 306 (428)
+.++|+||++||++|+.+.|.|.++++++++. ++.++.|+++.+ ..++
T Consensus 23 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~---------~v~~~~vd~~~~-----------------------~~~~ 70 (126)
T 1x5e_A 23 GDWMIEFYAPWCPACQNLQPEWESFAEWGEDL---------EVNIAKVDVTEQ-----------------------PGLS 70 (126)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGG---------TCEEEEEETTTC-----------------------HHHH
T ss_pred CCEEEEEECCCCHHHHHHhHHHHHHHHHhccC---------CeEEEEEECcCC-----------------------HHHH
Confidence 34899999999999999999999999998754 589999988855 5689
Q ss_pred HhcCcCccceEEEECCCCcEEe
Q 014225 307 KYFDVQGIPCLVIIGPEGKTVT 328 (428)
Q Consensus 307 ~~~~v~~~P~~~lid~~G~i~~ 328 (428)
+.|+|.++||++++ ++|++..
T Consensus 71 ~~~~v~~~Pt~~~~-~~G~~~~ 91 (126)
T 1x5e_A 71 GRFIINALPTIYHC-KDGEFRR 91 (126)
T ss_dssp HHTTCCSSSEEEEE-ETTEEEE
T ss_pred HHcCCcccCEEEEE-eCCeEEE
Confidence 99999999999999 8999643
No 274
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.43 E-value=1.6e-12 Score=107.92 Aligned_cols=86 Identities=12% Similarity=0.111 Sum_probs=67.0
Q ss_pred CCCCCceeccccc-CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcC
Q 014225 212 GHPPDEKVPVSSL-VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 290 (428)
Q Consensus 212 ~~~g~~~v~l~~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~ 290 (428)
.+++. .+.-.-. .+++++|+||++||++|+.+.|.|.++++.+... ....++.++.|+++.+
T Consensus 19 ~l~~~-~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~-----~~~~~v~~~~vd~~~~----------- 81 (127)
T 3h79_A 19 ELTDE-TFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQK-----RNHLTFVAARIDGEKY----------- 81 (127)
T ss_dssp ECCTT-THHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS-----TTTTTEEEEEEETTTC-----------
T ss_pred ECChh-hHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhc-----ccCCCeEEEEEEcccc-----------
Confidence 44555 4432222 4799999999999999999999999999988632 0124688888888855
Q ss_pred CccccccCCcchhHHHHhcCcCccceEEEECCCCcE
Q 014225 291 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 326 (428)
Q Consensus 291 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 326 (428)
.++++.|+|.++||++++++++++
T Consensus 82 ------------~~l~~~~~v~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 82 ------------PDVIERMRVSGFPTMRYYTRIDKQ 105 (127)
T ss_dssp ------------HHHHHHTTCCSSSEEEEECSSCSS
T ss_pred ------------HhHHHhcCCccCCEEEEEeCCCCC
Confidence 679999999999999999766653
No 275
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.43 E-value=6.1e-13 Score=110.42 Aligned_cols=88 Identities=19% Similarity=0.345 Sum_probs=72.0
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++++++. ++.++.|++|.+ .+
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-----------~v~~~~vd~d~~-----------------------~~ 81 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-----------TVKFAKVDADNN-----------------------SE 81 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------HH
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-----------CCEEEEEECCCC-----------------------HH
Confidence 57899999999999999999999999988873 478999998865 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
+++.|+|.++||++++ ++|+++.+.. | .+. ++|.+.|+++++
T Consensus 82 l~~~~~v~~~Pt~~i~-~~G~~~~~~~-------G-----~~~---~~l~~~l~~~l~ 123 (125)
T 1r26_A 82 IVSKCRVLQLPTFIIA-RSGKMLGHVI-------G-----ANP---GMLRQKLRDIIK 123 (125)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEEE-------S-----SCH---HHHHHHHHHHHH
T ss_pred HHHHcCCCcccEEEEE-eCCeEEEEEe-------C-----CCH---HHHHHHHHHHhc
Confidence 8999999999998888 8999887632 2 122 567777777665
No 276
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.43 E-value=3.8e-13 Score=112.38 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=64.0
Q ss_pred CCCCCceeccccc-CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcC
Q 014225 212 GHPPDEKVPVSSL-VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 290 (428)
Q Consensus 212 ~~~g~~~v~l~~~-~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~ 290 (428)
..++. .+..... .+++++|+||++||++|+.+.|.|.+++++++.. .++.++.|+++.+
T Consensus 11 ~l~~~-~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--------~~~~~~~vd~~~~----------- 70 (133)
T 2dj3_A 11 VVVGK-TFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ--------KDLVIAKMDATAN----------- 70 (133)
T ss_dssp ECCTT-TCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS--------SSEEEEEECTTTS-----------
T ss_pred EEcCC-CHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC--------CCEEEEEecCCcC-----------
Confidence 45555 4443333 4899999999999999999999999999998742 2577777776643
Q ss_pred CccccccCCcchhHHHHhcCcCccceEEEECCCCcE
Q 014225 291 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 326 (428)
Q Consensus 291 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 326 (428)
..+++.|+|.++||+++++++|++
T Consensus 71 ------------~~~~~~~~v~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 71 ------------DITNDQYKVEGFPTIYFAPSGDKK 94 (133)
T ss_dssp ------------CCCCSSCCCSSSSEEEEECTTCTT
T ss_pred ------------HHHHhhcCCCcCCEEEEEeCCCcc
Confidence 345678999999999999877653
No 277
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.43 E-value=5.5e-13 Score=114.65 Aligned_cols=90 Identities=11% Similarity=0.283 Sum_probs=73.5
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
++++++|+||++||++|+.+.|.|.++++++. ++.++.|++|.+ ..
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-----------~v~~~~vd~~~~-----------------------~~ 76 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-----------QVSFVKLEAEGV-----------------------PE 76 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS-----------------------HH
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-----------CeEEEEEECCCC-----------------------HH
Confidence 48899999999999999999999999988863 588999998865 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
+++.|+|.++|++++++ +|+++.+..+ ... ++|.+.|++++...
T Consensus 77 l~~~~~v~~~Pt~~~~~-~G~~~~~~~G------------~~~---~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 77 VSEKYEISSVPTFLFFK-NSQKIDRLDG------------AHA---PELTKKVQRHASSG 120 (153)
T ss_dssp HHHHTTCCSSSEEEEEE-TTEEEEEEES------------SCH---HHHHHHHHHHSCTT
T ss_pred HHHHcCCCCCCEEEEEE-CCEEEEEEeC------------CCH---HHHHHHHHHHhccc
Confidence 89999999999999997 9999876432 122 45777777776543
No 278
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.42 E-value=2.2e-12 Score=126.26 Aligned_cols=162 Identities=16% Similarity=0.171 Sum_probs=105.0
Q ss_pred CCCEEEEEEecCCChhhhhhHHH-------HHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHH
Q 014225 60 EGKVTALYFSANWYPPCGNFTGV-------LVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKK 132 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~-------l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~ 132 (428)
++++++|+|||+||+ |+.++|. +.++++.+++.+ +.++.|++|.. .
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~--v~~~~Vd~~~~------------------------~ 79 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKD--IGFVMVDAKKE------------------------A 79 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSS--EEEEEEETTTT------------------------H
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcC--cEEEEEeCCCC------------------------H
Confidence 478999999999999 9999999 899999988764 88888766543 6
Q ss_pred HHHhhcCCCCCceEEEEcCCCCCCCcccccchhhhhhcccCccccchhhHHHHHHHHHHHHHHHHHhhhhccCCCCcccC
Q 014225 133 ALNRKFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLG 212 (428)
Q Consensus 133 ~l~~~~~v~~~P~~~lid~~~~dG~i~~~~~~~~i~~~g~~~~p~t~~~~~~l~~~~~~~~~~~~~~~~~g~~~p~f~l~ 212 (428)
.+++.|+|.++||++++. +|++.... |. .+.. .+... +.+.++ |... .
T Consensus 80 ~l~~~~~v~~~Pt~~~~~----~g~~~~~~--------G~----~~~~---~l~~~---------i~~~~~---~~~~-~ 127 (350)
T 1sji_A 80 KLAKKLGFDEEGSLYVLK----GDRTIEFD--------GE----FAAD---VLVEF---------LLDLIE---DPVE-I 127 (350)
T ss_dssp HHHHHHTCCSTTEEEEEE----TTEEEEEC--------SC----CCHH---HHHHH---------HHTTSS---CSEE-E
T ss_pred HHHHhcCCCccceEEEEE----CCcEEEec--------CC----CCHH---HHHHH---------HHHhcC---Ccce-e
Confidence 789999999999999996 68633111 11 1111 11111 111111 1111 1
Q ss_pred CCCCceecccc---cCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhc
Q 014225 213 HPPDEKVPVSS---LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGT 289 (428)
Q Consensus 213 ~~g~~~v~l~~---~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~ 289 (428)
.+.. -.+.+ ...++++|.|+++||. ...+.+.+++..+++. +.+..++ +
T Consensus 128 l~~~--~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~~~~~A~~~~~~----------~~f~~~~---~---------- 179 (350)
T 1sji_A 128 INSK--LEVQAFERIEDQIKLIGFFKSEES---EYYKAFEEAAEHFQPY----------IKFFATF---D---------- 179 (350)
T ss_dssp CCSH--HHHHHHHHCCSSCEEEEECSCTTS---HHHHHHHHHHHHTTTT----------SEEEEEC---C----------
T ss_pred ccch--HHHHHHhccCCCcEEEEEECCCCc---HHHHHHHHHHHhhccC----------cEEEEEC---C----------
Confidence 1100 00111 1235678889998864 4457788888888654 5554442 2
Q ss_pred CCccccccCCcchhHHHHhcCcCccceEEEECC
Q 014225 290 MPWLALPFGDPTIKELTKYFDVQGIPCLVIIGP 322 (428)
Q Consensus 290 ~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~ 322 (428)
.++++.|++. .|+++++.+
T Consensus 180 -------------~~~~~~~~v~-~p~i~~~~~ 198 (350)
T 1sji_A 180 -------------KGVAKKLSLK-MNEVDFYEP 198 (350)
T ss_dssp -------------HHHHHHHTCC-TTCEEEECT
T ss_pred -------------HHHHHHcCCC-CCcEEEEeC
Confidence 5688899999 999999966
No 279
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.41 E-value=9.6e-13 Score=111.31 Aligned_cols=72 Identities=18% Similarity=0.240 Sum_probs=64.0
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.+ ..
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~----------v~~~~vd~~~~-----------------------~~ 69 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS----------AVFGRINIATN-----------------------PW 69 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------SEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc----------eEEEEEECCcC-----------------------Hh
Confidence 3789999999999999999999999999998754 88999998865 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++||++++ ++|+++.+.
T Consensus 70 l~~~~~v~~~Pt~~~~-~~G~~~~~~ 94 (140)
T 3hz4_A 70 TAEKYGVQGTPTFKFF-CHGRPVWEQ 94 (140)
T ss_dssp HHHHHTCCEESEEEEE-ETTEEEEEE
T ss_pred HHHHCCCCcCCEEEEE-eCCcEEEEE
Confidence 8999999999999999 899988764
No 280
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.7e-12 Score=124.20 Aligned_cols=67 Identities=28% Similarity=0.520 Sum_probs=59.8
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++++|+|||+||++|+.+.|.+.++++++++. +.++.|++|.+.. ..+++.|+
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~---~~~~~v~~d~~~~----------------------~~l~~~~~ 88 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV---VQVAAVNCDLNKN----------------------KALCAKYD 88 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTSTTT----------------------HHHHHHTT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC---cEEEEEEccCccC----------------------HHHHHhCC
Confidence 4789999999999999999999999999999764 8889888875433 78999999
Q ss_pred CCCCceEEEEcC
Q 014225 140 IEGIPCLVVLQP 151 (428)
Q Consensus 140 v~~~P~~~lid~ 151 (428)
|.++|++++++.
T Consensus 89 I~~~Pt~~~~~~ 100 (298)
T 3ed3_A 89 VNGFPTLMVFRP 100 (298)
T ss_dssp CCBSSEEEEEEC
T ss_pred CCccceEEEEEC
Confidence 999999999994
No 281
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.41 E-value=8.8e-13 Score=108.38 Aligned_cols=88 Identities=24% Similarity=0.419 Sum_probs=71.1
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++.++++ ++.++.|++|.+ .+
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~vd~~~~-----------------------~~ 78 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP-----------NAVFLKVDVDEL-----------------------KP 78 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------HH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CcEEEEEECCCC-----------------------HH
Confidence 57899999999999999999999999988764 478899988865 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
+++.|+|.++|+++++ ++|+++.+..+. . .++|.+.|+++++
T Consensus 79 ~~~~~~v~~~Pt~~~~-~~G~~~~~~~G~-----------~----~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 79 IAEQFSVEAMPTFLFM-KEGDVKDRVVGA-----------I----KEELTAKVGLHAA 120 (122)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEEESS-----------C----HHHHHHHHHHHHS
T ss_pred HHHHcCCCcccEEEEE-eCCEEEEEEeCc-----------C----HHHHHHHHHHHhc
Confidence 8999999999998888 899998764221 1 3566777776654
No 282
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.41 E-value=4.1e-13 Score=110.38 Aligned_cols=97 Identities=14% Similarity=0.199 Sum_probs=72.9
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|+++.+ .+
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~----------~~~~~vd~~~~-----------------------~~ 66 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGK----------VRAGKVDCQAY-----------------------PQ 66 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------CEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC----------eEEEEEeCcCC-----------------------HH
Confidence 4689999999999999999999999999988643 88999988865 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcCC
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNLP 365 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~~ 365 (428)
+++.|+|.++|++++++++|++....|.. .| +.+ .++|.+.|+++++..+
T Consensus 67 ~~~~~~v~~~Pt~~~~~~~~~~~~~~g~~----~~----~~~---~~~l~~~l~~~l~~~~ 116 (122)
T 3aps_A 67 TCQKAGIKAYPSVKLYQYERAKKSIWEEQ----IN----SRD---AKTIAALIYGKLETLQ 116 (122)
T ss_dssp HHHHTTCCSSSEEEEEEEEGGGTEEEEEE----EC----CSC---HHHHHHHHHHHHHCC-
T ss_pred HHHHcCCCccceEEEEeCCCccceeeccc----cC----cCC---HHHHHHHHHHHHHhhh
Confidence 88999999999999998777632221110 01 122 3567777777776543
No 283
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.41 E-value=3.5e-13 Score=122.24 Aligned_cols=113 Identities=15% Similarity=0.153 Sum_probs=86.3
Q ss_pred cCCCCccc-CCCCCceecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHH
Q 014225 204 NHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTS 282 (428)
Q Consensus 204 ~~~p~f~l-~~~g~~~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~ 282 (428)
...++..+ +.++. .+......|++++|+||++||++|+.+.|.|.++++++++. +.++.|+++.+
T Consensus 92 ~~~~~~~v~~l~~~-~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~----------v~~~~vd~~~~--- 157 (210)
T 3apq_A 92 IYDDDPEIITLERR-EFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL----------LRIGAVNCGDD--- 157 (210)
T ss_dssp TTTTCTTSEECCHH-HHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT----------BEEEEEETTTC---
T ss_pred ccCCCCceEEecHH-HHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc----------eEEEEEECCcc---
Confidence 33344555 55665 55544467899999999999999999999999999988643 88999998865
Q ss_pred HHHHHhcCCccccccCCcchhHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 283 FESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 283 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
..+++.|+|.++||++++ ++|+++.+..+ ..+ .++|.+.|++++.
T Consensus 158 --------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G-----------~~~---~~~l~~~i~~~l~ 202 (210)
T 3apq_A 158 --------------------RMLCRMKGVNSYPSLFIF-RSGMAAVKYNG-----------DRS---KESLVAFAMQHVR 202 (210)
T ss_dssp --------------------HHHHHHTTCCSSSEEEEE-CTTSCCEECCS-----------CCC---HHHHHHHHHHHHH
T ss_pred --------------------HHHHHHcCCCcCCeEEEE-ECCCceeEecC-----------CCC---HHHHHHHHHHhCc
Confidence 578999999999999999 99988766432 112 3567788887776
Q ss_pred cCC
Q 014225 363 NLP 365 (428)
Q Consensus 363 ~~~ 365 (428)
...
T Consensus 203 ~~~ 205 (210)
T 3apq_A 203 STV 205 (210)
T ss_dssp CCS
T ss_pred ccc
Confidence 543
No 284
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.41 E-value=1.4e-12 Score=104.24 Aligned_cols=72 Identities=29% Similarity=0.529 Sum_probs=64.2
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++.+++++ ++.++.|+++.+ ..
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 65 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG----------KVTVAKVNIDDN-----------------------PE 65 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT----------SEEEEEEETTTC-----------------------CH
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC----------cEEEEEEECCCC-----------------------HH
Confidence 578999999999999999999999999998864 489999998855 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|++.++|+++++ ++|+++.+.
T Consensus 66 ~~~~~~v~~~Pt~~~~-~~G~~~~~~ 90 (107)
T 2i4a_A 66 TPNAYQVRSIPTLMLV-RDGKVIDKK 90 (107)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHhcCCCccCEEEEE-eCCEEEEEe
Confidence 8999999999999999 999998764
No 285
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.41 E-value=1e-12 Score=104.78 Aligned_cols=73 Identities=27% Similarity=0.561 Sum_probs=63.7
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchh
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 303 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 303 (428)
.++++++|+||++||++|+.+.|.+.++.++++. ++.++.|++|.+ .
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~ 64 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD----------NVVVLKVDVDEC-----------------------E 64 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TEEEEEEETTTC-----------------------H
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC----------CeEEEEEeccch-----------------------H
Confidence 4689999999999999999999999999988753 589999998855 6
Q ss_pred HHHHhcCcCccceEEEECCCCcEEecc
Q 014225 304 ELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 304 ~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
.+++.|++.++|+++++ ++|+++.+.
T Consensus 65 ~~~~~~~v~~~Pt~~~~-~~G~~~~~~ 90 (106)
T 1xwb_A 65 DIAMEYNISSMPTFVFL-KNGVKVEEF 90 (106)
T ss_dssp HHHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHHHcCCCcccEEEEE-cCCcEEEEE
Confidence 78999999999998877 899988764
No 286
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.41 E-value=2.2e-13 Score=118.91 Aligned_cols=77 Identities=17% Similarity=0.172 Sum_probs=62.4
Q ss_pred EecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHH
Q 014225 54 VKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKA 133 (428)
Q Consensus 54 v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 133 (428)
..+++++||+++|+|||+|||||+.++|.|.+++++++ ++.++.|++|.. ..
T Consensus 47 ~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~----~v~~~~v~~d~~------------------------~~ 98 (167)
T 1z6n_A 47 ERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP----NIELAIISKGRA------------------------ED 98 (167)
T ss_dssp HHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT----TEEEEEECHHHH------------------------HH
T ss_pred HHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CcEEEEEECCCC------------------------HH
Confidence 34567789999999999999999999999999998864 288888866533 44
Q ss_pred HHhhcC---CCCCceEEEEcCCCCCCCcccc
Q 014225 134 LNRKFD---IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 134 l~~~~~---v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+++.|. +.++|+++++++ +|+++.+
T Consensus 99 ~~~~~~~~~v~~iPt~i~~~~---~G~~~~~ 126 (167)
T 1z6n_A 99 DLRQRLALERIAIPLVLVLDE---EFNLLGR 126 (167)
T ss_dssp HTTTTTTCSSCCSSEEEEECT---TCCEEEE
T ss_pred HHHHHHHcCCCCcCeEEEECC---CCCEEEE
Confidence 555564 899999999998 8887654
No 287
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.40 E-value=7e-13 Score=108.77 Aligned_cols=72 Identities=28% Similarity=0.445 Sum_probs=62.9
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++++++ . ++.++.|++|.+ .+
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~----------~v~~~~vd~~~~-----------------------~~ 67 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN-K----------DVTFIKVDVDKN-----------------------GN 67 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T----------TSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C----------CeEEEEEECCCC-----------------------HH
Confidence 4789999999999999999999999999887 2 588999998865 67
Q ss_pred HHHhcCcCccceEEEECC---CCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGP---EGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~---~G~i~~~~ 330 (428)
+++.|+|.++|++++++. +|+++.+.
T Consensus 68 ~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~ 96 (118)
T 2f51_A 68 AADAYGVSSIPALFFVKKEGNEIKTLDQF 96 (118)
T ss_dssp HHHHTTCCSSSEEEEEEEETTEEEEEEEE
T ss_pred HHHhcCCCCCCEEEEEeCCCCcceEEEee
Confidence 899999999999999965 38888774
No 288
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.40 E-value=6.2e-13 Score=109.69 Aligned_cols=74 Identities=23% Similarity=0.422 Sum_probs=62.3
Q ss_pred ccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcch
Q 014225 223 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 302 (428)
Q Consensus 223 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 302 (428)
+..|++++|+||++||++|+.+.|.+.+++++++ ++.++.|+++.+ .
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-----------~~~~~~vd~~~~----------------------~ 80 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-----------DVIFLKLDCNQE----------------------N 80 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSST----------------------T
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-----------CCEEEEEecCcc----------------------h
Confidence 3468999999999999999999999999988764 478888888732 2
Q ss_pred hHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 303 KELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 303 ~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
.++++.|+|.++||++++ ++|+++.+.
T Consensus 81 ~~~~~~~~v~~~Pt~~~~-~~G~~~~~~ 107 (124)
T 1faa_A 81 KTLAKELGIRVVPTFKIL-KENSVVGEV 107 (124)
T ss_dssp HHHHHHHCCSSSSEEEEE-ETTEEEEEE
T ss_pred HHHHHHcCCCeeeEEEEE-eCCcEEEEE
Confidence 678999999999996665 899998764
No 289
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.40 E-value=1.4e-12 Score=103.90 Aligned_cols=72 Identities=19% Similarity=0.425 Sum_probs=63.1
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.+.+++++++++ +.++.|+++.+ ..
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~-----------------------~~ 63 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK----------IAVYKLNTDEA-----------------------PG 63 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT----------CEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc----------eEEEEEcCcch-----------------------HH
Confidence 4689999999999999999999999999888643 88999988855 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|++.++|+++++ ++|+++.+.
T Consensus 64 ~~~~~~v~~~Pt~~~~-~~g~~~~~~ 88 (105)
T 1fb6_A 64 IATQYNIRSIPTVLFF-KNGERKESI 88 (105)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHhCCCCcccEEEEE-eCCeEEEEE
Confidence 8999999999999888 799998764
No 290
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.40 E-value=3.5e-13 Score=114.56 Aligned_cols=69 Identities=13% Similarity=0.346 Sum_probs=60.2
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++|||+|||+||+||+.+.|.|.++++++++. +.++-|++|+. ..++..|+
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~---v~f~kVDVDe~------------------------~e~a~~y~ 92 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF---CVIYLVDITEV------------------------PDFNTMYE 92 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTTC------------------------CTTTTTTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC---cEEEEEECCCC------------------------HHHHHHcC
Confidence 4689999999999999999999999999999765 78888877765 56788899
Q ss_pred CCCCceEEEEcCCCCCCCcc
Q 014225 140 IEGIPCLVVLQPYDDKDDAT 159 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~ 159 (428)
|.++||++++. +|+.+
T Consensus 93 V~siPT~~fFk----~G~~v 108 (160)
T 2av4_A 93 LYDPVSVMFFY----RNKHM 108 (160)
T ss_dssp CCSSEEEEEEE----TTEEE
T ss_pred CCCCCEEEEEE----CCEEE
Confidence 99999999988 57665
No 291
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.40 E-value=5.3e-13 Score=109.01 Aligned_cols=73 Identities=25% Similarity=0.481 Sum_probs=62.4
Q ss_pred cccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcc
Q 014225 222 SSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 301 (428)
Q Consensus 222 ~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~ 301 (428)
++.+|++++|+||++||++|+.+.|.+.++++++ . +.++.|++|..
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~----------~~~~~vd~~~~---------------------- 74 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--D----------AIFVKVDVDKL---------------------- 74 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--S----------SEEEEEETTTS----------------------
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--C----------cEEEEEECCcc----------------------
Confidence 3446899999999999999999999999988766 3 68888888754
Q ss_pred hhHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 302 IKELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 302 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
.++++.|+|.++|+++++ ++|+++.+.
T Consensus 75 -~~~~~~~~v~~~Pt~~~~-~~G~~~~~~ 101 (117)
T 2xc2_A 75 -EETARKYNISAMPTFIAI-KNGEKVGDV 101 (117)
T ss_dssp -HHHHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred -HHHHHHcCCCccceEEEE-eCCcEEEEE
Confidence 678999999999998888 899988764
No 292
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.39 E-value=5.8e-13 Score=109.68 Aligned_cols=73 Identities=21% Similarity=0.421 Sum_probs=64.6
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++.+++++. ++.++.|++|.+ .+
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~~~~vd~d~~-----------------------~~ 79 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD---------KVGFYKVDVDEQ-----------------------SQ 79 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH---------HSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC---------cEEEEEEECcCC-----------------------HH
Confidence 5789999999999999999999999999988765 588999998865 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++|+++++ ++|+++.+.
T Consensus 80 ~~~~~~v~~~Pt~~~~-~~G~~~~~~ 104 (121)
T 2j23_A 80 IAQEVGIRAMPTFVFF-KNGQKIDTV 104 (121)
T ss_dssp HHHHHTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHHcCCCcccEEEEE-ECCeEEeeE
Confidence 8899999999999999 799988763
No 293
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.39 E-value=2.4e-12 Score=101.97 Aligned_cols=71 Identities=17% Similarity=0.443 Sum_probs=62.6
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
++++++|+||++||++|+.+.|.+.++.+.++ ++.++.|++|.+ .+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-----------~~~~~~v~~~~~-----------------------~~ 60 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYP-----------QVGFGKLNSDEN-----------------------PD 60 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------HH
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcC-----------CceEEEEECCCC-----------------------HH
Confidence 57899999999999999999999999888764 378999998855 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|++.++|+++++ ++|+++.+.
T Consensus 61 ~~~~~~v~~~Pt~~~~-~~g~~~~~~ 85 (104)
T 2e0q_A 61 IAARYGVMSLPTVIFF-KDGEPVDEI 85 (104)
T ss_dssp HHHHTTCCSSCEEEEE-ETTEEEEEE
T ss_pred HHHhCCccccCEEEEE-ECCeEhhhc
Confidence 8999999999999999 899988764
No 294
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.39 E-value=1.4e-12 Score=104.42 Aligned_cols=72 Identities=24% Similarity=0.454 Sum_probs=63.7
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++.+++.+ ++.++.|++|.+ ..
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 63 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG----------KLLVAKLDVDEN-----------------------PK 63 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT----------TBEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC----------ceEEEEEECCCC-----------------------Hh
Confidence 478999999999999999999999999988864 388999998865 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|++.++|+++++ ++|+++.+.
T Consensus 64 ~~~~~~v~~~Pt~~~~-~~g~~~~~~ 88 (109)
T 2yzu_A 64 TAMRYRVMSIPTVILF-KDGQPVEVL 88 (109)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHhCCCCcCCEEEEE-eCCcEeeeE
Confidence 8999999999999999 999988763
No 295
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.39 E-value=1.8e-12 Score=104.68 Aligned_cols=72 Identities=25% Similarity=0.540 Sum_probs=63.0
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchh
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 303 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 303 (428)
..|++++|+||++||++|+.+.|.|.++.+++. ++.++.|++|.. .
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~v~~~~v~~~~~-----------------------~ 69 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-----------NVTFLKVDVDEL-----------------------K 69 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-----------SEEEEEEETTTC-----------------------H
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-----------CcEEEEEEcccc-----------------------H
Confidence 358899999999999999999999999888764 588999998755 6
Q ss_pred HHHHhcCcCccceEEEECCCCcEEecc
Q 014225 304 ELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 304 ~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
.+++.|++.++|+++++ ++|+++.+.
T Consensus 70 ~~~~~~~v~~~Pt~~~~-~~G~~~~~~ 95 (113)
T 1ti3_A 70 AVAEEWNVEAMPTFIFL-KDGKLVDKT 95 (113)
T ss_dssp HHHHHHHCSSTTEEEEE-ETTEEEEEE
T ss_pred HHHHhCCCCcccEEEEE-eCCEEEEEE
Confidence 78899999999999999 899998764
No 296
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.39 E-value=1.3e-12 Score=103.78 Aligned_cols=72 Identities=29% Similarity=0.610 Sum_probs=62.6
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchh
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 303 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 303 (428)
..+++++|+||++||++|+.+.|.|.++.+++. ++.++.|++|.. .
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~-----------------------~ 62 (104)
T 2vim_A 17 NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-----------EVEFAKVDVDQN-----------------------E 62 (104)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------H
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-----------CCEEEEEeccCC-----------------------H
Confidence 467899999999999999999999999888764 478999998855 5
Q ss_pred HHHHhcCcCccceEEEECCCCcEEecc
Q 014225 304 ELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 304 ~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
++++.|++.++|+++++ ++|+++.+.
T Consensus 63 ~~~~~~~v~~~Pt~~~~-~~g~~~~~~ 88 (104)
T 2vim_A 63 EAAAKYSVTAMPTFVFI-KDGKEVDRF 88 (104)
T ss_dssp HHHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHHHcCCccccEEEEE-eCCcEEEEE
Confidence 78899999999998888 699988764
No 297
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.08 E-value=3.5e-14 Score=118.30 Aligned_cols=102 Identities=21% Similarity=0.329 Sum_probs=77.1
Q ss_pred eecccccCCcEEEEEEeccCChhHHhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccc
Q 014225 218 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLA 294 (428)
Q Consensus 218 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~ 294 (428)
.+.+....||+++|+||++||++|+.+.|.+ .++.+.+..+ +.++.|+++.+.
T Consensus 11 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~----------~~~~~vd~~~~~-------------- 66 (130)
T 2lst_A 11 ALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEAR----------FVVASVSVDTPE-------------- 66 (130)
Confidence 6777778899999999999999999999999 8888776543 677777775331
Q ss_pred cccCCcchhHHHHhcCcCccceEEEECC-CCcE--EeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 295 LPFGDPTIKELTKYFDVQGIPCLVIIGP-EGKT--VTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 295 ~~~~~d~~~~~~~~~~v~~~P~~~lid~-~G~i--~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
...+++.|+|.++|+++++|+ +|++ +.+..+. .+ .++|.+.|++++.+.
T Consensus 67 -------~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~-----------~~---~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 67 -------GQELARRYRVPGTPTFVFLVPKAGAWEEVGRLFGS-----------RP---RAEFLKELRQVCVKG 118 (130)
Confidence 367889999999999999996 5888 6653221 11 245666676666544
No 298
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.38 E-value=9.8e-13 Score=109.97 Aligned_cols=78 Identities=26% Similarity=0.398 Sum_probs=66.1
Q ss_pred CCCCEEEEEEecCCChhhhhhHHHHH--HHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHh
Q 014225 59 LEGKVTALYFSANWYPPCGNFTGVLV--DVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 136 (428)
Q Consensus 59 ~~gk~vlv~F~a~wC~~C~~~~p~l~--~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 136 (428)
.+||+++|+||++||++|+.+.|.|. ++.+.++++ +.++.|+++.. +.. ..+++
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~---~~~~~vd~~~~-------------------~~~--~~l~~ 82 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH---FEVVKIDVGNF-------------------DRN--LELSQ 82 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH---CEEEEEECTTT-------------------TSS--HHHHH
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC---EEEEEEeCCcc-------------------cch--HHHHH
Confidence 46899999999999999999999999 999998764 88888887431 111 68899
Q ss_pred hcCC---CCCceEEEEcCCCCCCCcccccc
Q 014225 137 KFDI---EGIPCLVVLQPYDDKDDATLHDG 163 (428)
Q Consensus 137 ~~~v---~~~P~~~lid~~~~dG~i~~~~~ 163 (428)
.|++ .++|+++++|+ +|+++....
T Consensus 83 ~~~v~~~~~~Pt~~~~d~---~G~~~~~~~ 109 (133)
T 3fk8_A 83 AYGDPIQDGIPAVVVVNS---DGKVRYTTK 109 (133)
T ss_dssp HTTCGGGGCSSEEEEECT---TSCEEEECC
T ss_pred HhCCccCCccceEEEECC---CCCEEEEec
Confidence 9999 99999999999 999886643
No 299
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.38 E-value=1.7e-12 Score=105.81 Aligned_cols=71 Identities=25% Similarity=0.512 Sum_probs=62.2
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
+|++++|+||++||++|+.+.|.|.++++++. ++.++.|++|.+ .+
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~-----------~v~~~~vd~~~~-----------------------~~ 74 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP-----------DVRFVKCDVDES-----------------------PD 74 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CCEEEEEECCCC-----------------------HH
Confidence 47899999999999999999999999988764 378899988855 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++|+++++ ++|+++.+.
T Consensus 75 l~~~~~v~~~Pt~~~~-~~G~~~~~~ 99 (114)
T 2oe3_A 75 IAKECEVTAMPTFVLG-KDGQLIGKI 99 (114)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEEE
T ss_pred HHHHCCCCcccEEEEE-eCCeEEEEE
Confidence 8999999999999887 999998764
No 300
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.37 E-value=7.9e-13 Score=112.81 Aligned_cols=92 Identities=18% Similarity=0.326 Sum_probs=75.2
Q ss_pred cccccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhc
Q 014225 39 ASKDRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRAC 117 (428)
Q Consensus 39 g~~~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~ 117 (428)
+..+++. +.+.+++.+.....++|+++|+||++||++|+.+.|.|++++++++++ +.++.|+.|..
T Consensus 32 ~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---~~~~~vd~~~~---------- 98 (148)
T 3p2a_A 32 GHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK---VRFVKVNTEAE---------- 98 (148)
T ss_dssp CCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC----------
T ss_pred CCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc---eEEEEEECcCC----------
Confidence 4555666 777777766655567899999999999999999999999999998764 88888877644
Q ss_pred CCCceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 118 MPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 118 ~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..+++.|++.++|++++++ +|+++.+
T Consensus 99 --------------~~l~~~~~v~~~Pt~~~~~----~G~~~~~ 124 (148)
T 3p2a_A 99 --------------PALSTRFRIRSIPTIMLYR----NGKMIDM 124 (148)
T ss_dssp --------------HHHHHHTTCCSSSEEEEEE----TTEEEEE
T ss_pred --------------HHHHHHCCCCccCEEEEEE----CCeEEEE
Confidence 6788999999999999995 7877643
No 301
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.37 E-value=1.5e-12 Score=105.46 Aligned_cols=71 Identities=21% Similarity=0.403 Sum_probs=62.0
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.|++++|+||++||++|+.+.|.|.++.++++ ++.++.|+++.. ..
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-----------~v~~~~vd~~~~-----------------------~~ 70 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-----------KMVFIKVDVDEV-----------------------SE 70 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTT-----------------------HH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-----------CCEEEEEECCCC-----------------------HH
Confidence 57899999999999999999999999988764 478999988855 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++|+++++ ++|+++.+.
T Consensus 71 ~~~~~~v~~~Pt~~~~-~~G~~~~~~ 95 (112)
T 1syr_A 71 VTEKENITSMPTFKVY-KNGSSVDTL 95 (112)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHHcCCCcccEEEEE-ECCcEEEEE
Confidence 8899999999998877 799988763
No 302
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.36 E-value=2.6e-12 Score=104.60 Aligned_cols=88 Identities=22% Similarity=0.408 Sum_probs=70.9
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.|++++|+||++||++|+.+.|.|.++.++++ ++.++.|++|.. ..
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~-----------------------~~ 72 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-----------GAIFLKVDVDEL-----------------------KD 72 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS-----------------------HH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-----------CcEEEEEEcccC-----------------------HH
Confidence 47889999999999999999999999988874 478899988754 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
+++.|++.++|+++++ ++|+++.+.. |. + .++|.+.|+++++
T Consensus 73 ~~~~~~v~~~Pt~~~~-~~g~~~~~~~-------g~-----~---~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 73 VAEAYNVEAMPTFLFI-KDGEKVDSVV-------GG-----R---KDDIHTKIVALMG 114 (118)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEEEE-------SC-----C---HHHHHHHHHHHHC
T ss_pred HHHHcCCCcCcEEEEE-eCCeEEEEec-------CC-----C---HHHHHHHHHHHhc
Confidence 8999999999999988 8999887642 21 2 2566667766654
No 303
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.36 E-value=2.3e-12 Score=103.69 Aligned_cols=74 Identities=22% Similarity=0.455 Sum_probs=63.2
Q ss_pred CcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHH
Q 014225 226 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 305 (428)
Q Consensus 226 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 305 (428)
+++++|+||++||++|+.+.|.|.++.+++... ..++.++.|+++.+ .++
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-------~~~~~~~~vd~~~~-----------------------~~l 70 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPG-------LAGVKIAEVDCTAE-----------------------RNI 70 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC--------CCEEEEEEETTTC-----------------------HHH
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhcc-------CCceEEEEEecccc-----------------------HhH
Confidence 789999999999999999999999998876532 24688888888755 678
Q ss_pred HHhcCcCccceEEEECCCCcEEecc
Q 014225 306 TKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 306 ~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
++.|+|.++|+++++ ++|+++.+.
T Consensus 71 ~~~~~v~~~Pt~~~~-~~g~~~~~~ 94 (111)
T 3uvt_A 71 CSKYSVRGYPTLLLF-RGGKKVSEH 94 (111)
T ss_dssp HHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHhcCCCcccEEEEE-eCCcEEEec
Confidence 999999999999999 889887764
No 304
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.36 E-value=5.4e-12 Score=106.49 Aligned_cols=89 Identities=24% Similarity=0.376 Sum_probs=71.0
Q ss_pred CcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHH
Q 014225 226 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 305 (428)
Q Consensus 226 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 305 (428)
++.++|+||++||++|+.+.|.|.++++++++ ++.++.|+++.+ ..+
T Consensus 50 ~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~----------~v~~~~vd~~~~-----------------------~~l 96 (140)
T 1v98_A 50 APLTLVDFFAPWCGPCRLVSPILEELARDHAG----------RLKVVKVNVDEH-----------------------PGL 96 (140)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TEEEEEEETTTC-----------------------HHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHccC----------ceEEEEEECCCC-----------------------HHH
Confidence 33399999999999999999999999988864 389999998865 578
Q ss_pred HHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 306 TKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 306 ~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
++.|+|.++|+++++ ++|+++.+..+ . .+ .++|.+.|++++.
T Consensus 97 ~~~~~v~~~Pt~~~~-~~G~~~~~~~G-------~----~~---~~~l~~~i~~~l~ 138 (140)
T 1v98_A 97 AARYGVRSVPTLVLF-RRGAPVATWVG-------A----SP---RRVLEERLRPYLE 138 (140)
T ss_dssp HHHTTCCSSSEEEEE-ETTEEEEEEES-------C----CC---HHHHHHHHHHHHT
T ss_pred HHHCCCCccCEEEEE-eCCcEEEEEeC-------C----CC---HHHHHHHHHHHHc
Confidence 999999999999999 89998876432 1 12 3556677776664
No 305
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.35 E-value=1.4e-12 Score=123.74 Aligned_cols=74 Identities=19% Similarity=0.347 Sum_probs=65.7
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchh
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 303 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 303 (428)
-+||+|+|+||++||++|+.+.|.|.++.++++++ +.++.|++|.+ .
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~----------~~~~~vd~~~~-----------------------~ 70 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ----------FILAKLDCDAE-----------------------Q 70 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS----------SEEEEEETTTC-----------------------H
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC----------eEEEEEeCccC-----------------------H
Confidence 35899999999999999999999999999998743 88999998865 6
Q ss_pred HHHHhcCcCccceEEEECCCCcEEeccc
Q 014225 304 ELTKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 304 ~~~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
.+++.|+|.++||++++ ++|+++.+..
T Consensus 71 ~~~~~~~v~~~Pt~~~~-~~G~~~~~~~ 97 (287)
T 3qou_A 71 MIAAQFGLRAIPTVYLF-QNGQPVDGFQ 97 (287)
T ss_dssp HHHHTTTCCSSSEEEEE-ETTEEEEEEE
T ss_pred HHHHHcCCCCCCeEEEE-ECCEEEEEee
Confidence 78999999999999999 8999887643
No 306
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.35 E-value=1.2e-12 Score=109.30 Aligned_cols=81 Identities=14% Similarity=0.306 Sum_probs=63.0
Q ss_pred cccCCCCEEecccC-CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceec
Q 014225 46 LLNQHGTQVKVSDL-EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVP 124 (428)
Q Consensus 46 l~~~~G~~v~l~~~-~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~ 124 (428)
+...+++.+..... ++++++|+||++||++|+.+.|.|.++++++++.+ ++.++.|+.+..
T Consensus 9 v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~-~~~~~~vd~~~~----------------- 70 (133)
T 2dj3_A 9 VKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQK-DLVIAKMDATAN----------------- 70 (133)
T ss_dssp SEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSS-SEEEEEECTTTS-----------------
T ss_pred eEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCC-CEEEEEecCCcC-----------------
Confidence 45556665554443 48999999999999999999999999999998642 377777655433
Q ss_pred cCChHHHHHHHhhcCCCCCceEEEEcC
Q 014225 125 YSDLETKKALNRKFDIEGIPCLVVLQP 151 (428)
Q Consensus 125 ~~d~~~~~~l~~~~~v~~~P~~~lid~ 151 (428)
..+++.|++.++|+++++++
T Consensus 71 -------~~~~~~~~v~~~Pt~~~~~~ 90 (133)
T 2dj3_A 71 -------DITNDQYKVEGFPTIYFAPS 90 (133)
T ss_dssp -------CCCCSSCCCSSSSEEEEECT
T ss_pred -------HHHHhhcCCCcCCEEEEEeC
Confidence 23456799999999999996
No 307
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.35 E-value=1.6e-12 Score=110.49 Aligned_cols=71 Identities=18% Similarity=0.396 Sum_probs=61.2
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++|+|+|||+||++|+.+.|.|.+++++++++ +.++.|++|.. ..+++.|+
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~------------------------~~~~~~~~ 74 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF---AVIYLVDITEV------------------------PDFNKMYE 74 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTTC------------------------CTTTTSSC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---eEEEEEccccC------------------------HHHHHHcC
Confidence 4799999999999999999999999999999664 88988887754 34677899
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|++++++ +|+++..
T Consensus 75 i~~~Pt~~~~~----~G~~v~~ 92 (142)
T 1qgv_A 75 LYDPCTVMFFF----RNKHIMI 92 (142)
T ss_dssp SCSSCEEEEEE----TTEEEEE
T ss_pred CCCCCEEEEEE----CCcEEEE
Confidence 99999999996 7877754
No 308
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.34 E-value=1.6e-12 Score=106.56 Aligned_cols=72 Identities=31% Similarity=0.555 Sum_probs=63.3
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++.++++. ++.++.|+++.+ ..
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 75 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT----------DLTVAKLDVDTN-----------------------PE 75 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CeEEEEEECCCC-----------------------HH
Confidence 478999999999999999999999999988764 488999998865 57
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|+|.++|+++++ ++|+++.+.
T Consensus 76 ~~~~~~i~~~Pt~~~~-~~g~~~~~~ 100 (121)
T 2i1u_A 76 TARNFQVVSIPTLILF-KDGQPVKRI 100 (121)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred HHHhcCCCcCCEEEEE-ECCEEEEEe
Confidence 8999999999999988 699988764
No 309
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.34 E-value=2.8e-12 Score=109.80 Aligned_cols=70 Identities=23% Similarity=0.328 Sum_probs=60.2
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++|+|+|+|||+||++|+.+.|.|.++++++++. +.++.|++|.. ..+++.|+
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~---~~~~~vd~d~~------------------------~~l~~~~~ 74 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM---AAIYLVDVDQT------------------------AVYTQYFD 74 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT---EEEEEEETTTC------------------------CHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc---eEEEEEECCcC------------------------HHHHHHcC
Confidence 5799999999999999999999999999998764 88888877644 56888999
Q ss_pred CCCCceEEEEcCCCCCCCccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATL 160 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~ 160 (428)
+.++|+++++. +|+++.
T Consensus 75 v~~~Pt~~~~~----~G~~v~ 91 (149)
T 3gix_A 75 ISYIPSTVFFF----NGQHMK 91 (149)
T ss_dssp CCSSSEEEEEE----TTEEEE
T ss_pred CCccCeEEEEE----CCeEEE
Confidence 99999999554 788773
No 310
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.34 E-value=2.9e-12 Score=117.24 Aligned_cols=92 Identities=18% Similarity=0.401 Sum_probs=74.4
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+|+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.+ ..
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~----------v~~~~vd~d~~-----------------------~~ 75 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK----------LTVAKLNIDQN-----------------------PG 75 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT----------CEEEEEETTTC-----------------------TT
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC----------cEEEEEECCCC-----------------------HH
Confidence 5799999999999999999999999999998754 88999998865 56
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
+++.|+|.++||++++ ++|+++.+..+ . .+ .++|.+.|++++...
T Consensus 76 l~~~~~v~~~Pt~~~~-~~G~~~~~~~G-------~----~~---~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 76 TAPKYGIRGIPTLLLF-KNGEVAATKVG-------A----LS---KGQLKEFLDANLAGS 120 (222)
T ss_dssp TGGGGTCCSBSEEEEE-ETTEEEEEEES-------C----CC---HHHHHHHHHHHSCCS
T ss_pred HHHHcCCCcCCEEEEE-ECCeEEEEecc-------c----cC---hHHHHHHHHhhcccc
Confidence 7889999999999999 68998876432 1 12 356677777776543
No 311
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.33 E-value=2.2e-12 Score=105.75 Aligned_cols=83 Identities=17% Similarity=0.252 Sum_probs=62.4
Q ss_pred CCCCCceeccc-ccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcC
Q 014225 212 GHPPDEKVPVS-SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 290 (428)
Q Consensus 212 ~~~g~~~v~l~-~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~ 290 (428)
+.++. .+... ..++++++|+||++||++|+.+.|.|.++++++++. ....++.++.|+++.+.
T Consensus 11 ~l~~~-~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-----~~~~~v~~~~vd~~~~~---------- 74 (121)
T 2djj_A 11 VVVAK-NYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKS-----EFKDRVVIAKVDATAND---------- 74 (121)
T ss_dssp ECCTT-TTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTS-----SCTTSSEEEEEETTTSC----------
T ss_pred Eeccc-CHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhc-----ccCCceEEEEEECcccc----------
Confidence 55555 55443 246799999999999999999999999999999751 00125788888877431
Q ss_pred CccccccCCcchhHHHHhcCcCccceEEEECCCCcE
Q 014225 291 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 326 (428)
Q Consensus 291 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 326 (428)
+++ +|.++||+++++++|++
T Consensus 75 --------------~~~--~v~~~Pt~~~~~~~~~~ 94 (121)
T 2djj_A 75 --------------VPD--EIQGFPTIKLYPAGAKG 94 (121)
T ss_dssp --------------CSS--CCSSSSEEEEECSSCTT
T ss_pred --------------ccc--ccCcCCeEEEEeCcCCC
Confidence 222 89999999999888773
No 312
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.33 E-value=1.4e-12 Score=106.54 Aligned_cols=72 Identities=17% Similarity=0.294 Sum_probs=60.8
Q ss_pred cCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhh
Q 014225 58 DLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRK 137 (428)
Q Consensus 58 ~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 137 (428)
+.++|+++|+||++||++|+.+.|.|.++++++++ +.++.|++|.. ..+++.
T Consensus 28 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----v~~~~vd~d~~------------------------~~l~~~ 79 (116)
T 3qfa_C 28 AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN----VIFLEVDVDDC------------------------QDVASE 79 (116)
T ss_dssp HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT----SEEEEEETTTT------------------------HHHHHH
T ss_pred hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCC------------------------HHHHHH
Confidence 34689999999999999999999999999988754 77888776543 678899
Q ss_pred cCCCCCceEEEEcCCCCCCCcccc
Q 014225 138 FDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 138 ~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
|++.++|+++++ + +|+++.+
T Consensus 80 ~~v~~~Pt~~~~-~---~G~~~~~ 99 (116)
T 3qfa_C 80 CEVKSMPTFQFF-K---KGQKVGE 99 (116)
T ss_dssp TTCCSSSEEEEE-S---SSSEEEE
T ss_pred cCCccccEEEEE-e---CCeEEEE
Confidence 999999999999 4 7877654
No 313
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.33 E-value=2.6e-12 Score=105.43 Aligned_cols=69 Identities=12% Similarity=0.053 Sum_probs=58.9
Q ss_pred CcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHH
Q 014225 226 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 305 (428)
Q Consensus 226 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 305 (428)
+++|+|+||++||++|+.+.|.|++++++|. ++.++.|++|..
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-----------~v~f~kvd~d~~-------------------------- 65 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-----------ETKFVKAIVNSC-------------------------- 65 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-----------TSEEEEEEGGGT--------------------------
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-----------CCEEEEEEhHHh--------------------------
Confidence 4599999999999999999999999998874 468888887621
Q ss_pred HHhcCcCccceEEEECCCCcEEecccc
Q 014225 306 TKYFDVQGIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 306 ~~~~~v~~~P~~~lid~~G~i~~~~~~ 332 (428)
+..|+|.++||++++ ++|+.+.+..+
T Consensus 66 ~~~~~v~~~PT~~~f-k~G~~v~~~~G 91 (118)
T 3evi_A 66 IQHYHDNCLPTIFVY-KNGQIEAKFIG 91 (118)
T ss_dssp STTCCGGGCSEEEEE-ETTEEEEEEES
T ss_pred HHHCCCCCCCEEEEE-ECCEEEEEEeC
Confidence 367999999999999 99999988543
No 314
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.33 E-value=3.1e-12 Score=103.40 Aligned_cols=71 Identities=20% Similarity=0.307 Sum_probs=61.7
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.|.++.+.+. ++.++.|+++.. .+
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-----------~v~~~~vd~~~~-----------------------~~ 63 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-----------QVAISSVDSEAR-----------------------PE 63 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-----------TSCEEEEEGGGC-----------------------HH
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-----------CcEEEEEcCcCC-----------------------HH
Confidence 46899999999999999999999998887653 478888888754 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|++.++|+++++ ++|+++.+.
T Consensus 64 l~~~~~v~~~Pt~~~~-~~G~~v~~~ 88 (110)
T 2l6c_A 64 LMKELGFERVPTLVFI-RDGKVAKVF 88 (110)
T ss_dssp HHHHTTCCSSCEEEEE-ESSSEEEEE
T ss_pred HHHHcCCcccCEEEEE-ECCEEEEEE
Confidence 8999999999999999 999998874
No 315
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.32 E-value=4.7e-12 Score=106.44 Aligned_cols=70 Identities=20% Similarity=0.441 Sum_probs=61.9
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+|+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.. ..+++.|+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~------------------------~~l~~~~~ 89 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ---IVIYKVDTEKE------------------------QELAGAFG 89 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---EEEEEEeCCCC------------------------HHHHHHcC
Confidence 5789999999999999999999999999998754 88888877644 57888999
Q ss_pred CCCCceEEEEcCCCCCCCcc
Q 014225 140 IEGIPCLVVLQPYDDKDDAT 159 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~ 159 (428)
+.++|+++++++ +|+++
T Consensus 90 v~~~Pt~~~~~~---~G~~~ 106 (136)
T 2l5l_A 90 IRSIPSILFIPM---EGKPE 106 (136)
T ss_dssp CCSSCEEEEECS---SSCCE
T ss_pred CCCCCEEEEECC---CCcEE
Confidence 999999999998 99875
No 316
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.32 E-value=3.2e-12 Score=107.62 Aligned_cols=85 Identities=21% Similarity=0.366 Sum_probs=66.8
Q ss_pred cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceecc
Q 014225 46 LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPY 125 (428)
Q Consensus 46 l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~ 125 (428)
+...+++.+......+|+++|+||++||++|+.+.|.|.++++++++.+.++.++.|+.+..
T Consensus 19 v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~------------------ 80 (140)
T 2dj1_A 19 VWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA------------------ 80 (140)
T ss_dssp EEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC------------------
T ss_pred CEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc------------------
Confidence 34445555544334689999999999999999999999999999988754567776655432
Q ss_pred CChHHHHHHHhhcCCCCCceEEEEcCCCCCCCc
Q 014225 126 SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDA 158 (428)
Q Consensus 126 ~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i 158 (428)
..+++.|++.++|+++++. +|++
T Consensus 81 ------~~~~~~~~v~~~Pt~~~~~----~G~~ 103 (140)
T 2dj1_A 81 ------SMLASKFDVSGYPTIKILK----KGQA 103 (140)
T ss_dssp ------HHHHHHTTCCSSSEEEEEE----TTEE
T ss_pred ------HHHHHHCCCCccCeEEEEE----CCcE
Confidence 6788999999999999994 7863
No 317
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.32 E-value=1.8e-11 Score=120.48 Aligned_cols=163 Identities=12% Similarity=0.097 Sum_probs=102.8
Q ss_pred CCCEEEEEEecCCChhhhhhH------HHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHH
Q 014225 60 EGKVTALYFSANWYPPCGNFT------GVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKA 133 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~------p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 133 (428)
.+++++|+|||+||++|.... |.+.++++.+++.+ +.++.|+++.. ..
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~--v~~~~Vd~~~~------------------------~~ 82 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKG--VGFGLVDSEKD------------------------AA 82 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEETTTT------------------------HH
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCC--ceEEEEeCccc------------------------HH
Confidence 468999999999999974432 68889999987654 77777766543 78
Q ss_pred HHhhcCCCCCceEEEEcCCCCCCCcccccchhhhhhcccCccccchhhHHHHHHHHHHHHHHHHHhhhhccCCCCcccCC
Q 014225 134 LNRKFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGH 213 (428)
Q Consensus 134 l~~~~~v~~~P~~~lid~~~~dG~i~~~~~~~~i~~~g~~~~p~t~~~~~~l~~~~~~~~~~~~~~~~~g~~~p~f~l~~ 213 (428)
+++.|+|.++||++++. +|+.+...+ +.+.. .+...... .++.+ .. ..
T Consensus 83 l~~~~~V~~~PTl~~f~----~G~~~~y~G------------~~~~~---~i~~~i~~---------~~~~~---v~-~i 130 (367)
T 3us3_A 83 VAKKLGLTEEDSIYVFK----EDEVIEYDG------------EFSAD---TLVEFLLD---------VLEDP---VE-LI 130 (367)
T ss_dssp HHHHHTCCSTTEEEEEE----TTEEEECCS------------CCSHH---HHHHHHHH---------HHSCS---EE-EC
T ss_pred HHHHcCCCcCceEEEEE----CCcEEEeCC------------CCCHH---HHHHHHHH---------hcCCC---cE-Ec
Confidence 99999999999999998 676532211 11111 12111111 11111 11 00
Q ss_pred CCCceeccccc---CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcC
Q 014225 214 PPDEKVPVSSL---VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 290 (428)
Q Consensus 214 ~g~~~v~l~~~---~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~ 290 (428)
+.. -.+..+ ..++++|.|+++||. ...+.+.+++..+++. +.+..++ +
T Consensus 131 ~~~--~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~----------~~F~~~~-~------------- 181 (367)
T 3us3_A 131 EGE--RELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPY----------IPFFATF-D------------- 181 (367)
T ss_dssp CSH--HHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTT----------SCEEEEC-C-------------
T ss_pred CCH--HHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCC----------cEEEEEC-C-------------
Confidence 000 011111 236788899998865 4566788888888754 4444432 2
Q ss_pred CccccccCCcchhHHHHhcCcCccceEEEECC
Q 014225 291 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGP 322 (428)
Q Consensus 291 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~ 322 (428)
..+++.|+++. |+++++-+
T Consensus 182 ------------~~~~~~~~v~~-p~i~lf~~ 200 (367)
T 3us3_A 182 ------------SKVAKKLTLKL-NEIDFYEA 200 (367)
T ss_dssp ------------HHHHHHHTCCT-TCEEEECT
T ss_pred ------------HHHHHHcCCCC-CeEEEEcC
Confidence 56788899985 99999955
No 318
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.32 E-value=2.7e-12 Score=103.97 Aligned_cols=71 Identities=24% Similarity=0.413 Sum_probs=62.0
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++|+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.+ ..+++.|+
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~---v~~~~vd~~~~------------------------~~l~~~~~ 68 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDK---LKIVKIDVDEN------------------------QETAGKYG 68 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTT---CEEEEEETTTC------------------------CSHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---cEEEEEECCCC------------------------HHHHHHcC
Confidence 6899999999999999999999999999999763 88888887654 45778899
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++.+
T Consensus 69 v~~~Pt~~~~-~---~G~~~~~ 86 (112)
T 2voc_A 69 VMSIPTLLVL-K---DGEVVET 86 (112)
T ss_dssp CCSBSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-e---CCEEEEE
Confidence 9999999999 6 8987644
No 319
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.31 E-value=6.3e-12 Score=104.21 Aligned_cols=82 Identities=7% Similarity=0.115 Sum_probs=64.0
Q ss_pred cccCCCCEEecccC-CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcC--CCcEEEEEEecCCChHHHHHHHhcCCCce
Q 014225 46 LLNQHGTQVKVSDL-EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNN--GSDFEVVFVSSDEDLNAFNNYRACMPWLA 122 (428)
Q Consensus 46 l~~~~G~~v~l~~~-~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~--~~~~~ii~vs~D~~~~~~~~~~~~~~~~~ 122 (428)
+...+++++..... .+++++|+|||+||++|+.+.|.+.++++++... ..++.++.|+.|..
T Consensus 17 v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~--------------- 81 (127)
T 3h79_A 17 VVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY--------------- 81 (127)
T ss_dssp CEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC---------------
T ss_pred eEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc---------------
Confidence 44455554443333 4799999999999999999999999999988632 23477777766543
Q ss_pred eccCChHHHHHHHhhcCCCCCceEEEEcC
Q 014225 123 VPYSDLETKKALNRKFDIEGIPCLVVLQP 151 (428)
Q Consensus 123 ~~~~d~~~~~~l~~~~~v~~~P~~~lid~ 151 (428)
..+++.|+|.++|+++++++
T Consensus 82 ---------~~l~~~~~v~~~Pt~~~~~~ 101 (127)
T 3h79_A 82 ---------PDVIERMRVSGFPTMRYYTR 101 (127)
T ss_dssp ---------HHHHHHTTCCSSSEEEEECS
T ss_pred ---------HhHHHhcCCccCCEEEEEeC
Confidence 67899999999999999996
No 320
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.31 E-value=3.8e-12 Score=102.70 Aligned_cols=70 Identities=17% Similarity=0.380 Sum_probs=59.8
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
+||+++|+||++||++|+.+.|.|+++++++++ +.++.|++|.. ..+++.|+
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~----~~~~~vd~~~~------------------------~~l~~~~~ 74 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ----ADFYKLDVDEL------------------------GDVAQKNE 74 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC----CEEEEEECCCC------------------------HHHHHHcC
Confidence 589999999999999999999999999999853 67777766543 67889999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|++++++ +|+++.+
T Consensus 75 v~~~Pt~~~~~----~G~~~~~ 92 (109)
T 3f3q_A 75 VSAMPTLLLFK----NGKEVAK 92 (109)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CCccCEEEEEE----CCEEEEE
Confidence 99999999997 6876644
No 321
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.31 E-value=2.1e-11 Score=120.75 Aligned_cols=73 Identities=12% Similarity=0.269 Sum_probs=60.1
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCC---CcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHh
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNG---SDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 136 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~---~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 136 (428)
.+++++|.|||+||++|+.+.|.+.++++++++.. .++.++.|++|.. ..+++
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~------------------------~~l~~ 76 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH------------------------SDIAQ 76 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC------------------------HHHHH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc------------------------HHHHH
Confidence 47899999999999999999999999999996431 1377777765533 68899
Q ss_pred hcCCCCCceEEEEcCCCCCCCccc
Q 014225 137 KFDIEGIPCLVVLQPYDDKDDATL 160 (428)
Q Consensus 137 ~~~v~~~P~~~lid~~~~dG~i~~ 160 (428)
.|+|.++|+++++. +|+++.
T Consensus 77 ~~~v~~~Pt~~~f~----~G~~~~ 96 (382)
T 2r2j_A 77 RYRISKYPTLKLFR----NGMMMK 96 (382)
T ss_dssp HTTCCEESEEEEEE----TTEEEE
T ss_pred hcCCCcCCEEEEEe----CCcEee
Confidence 99999999999887 687653
No 322
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.31 E-value=7.6e-13 Score=109.51 Aligned_cols=72 Identities=22% Similarity=0.509 Sum_probs=58.9
Q ss_pred CCcEEEEEEeccCCh--------------hHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcC
Q 014225 225 VGKTVGLYFSARWCI--------------PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 290 (428)
Q Consensus 225 ~gk~vll~F~a~wC~--------------~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~ 290 (428)
.||+++|+||++||+ +|+.+.|.+.+++++++++ +.++.|++|.+
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~----------~~~~~vd~d~~----------- 78 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK----------LTVAKLNIDQN----------- 78 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-----------------CEEEEEETTSC-----------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC----------eEEEEEECCCC-----------
Confidence 479999999999999 9999999999999888654 78999998865
Q ss_pred CccccccCCcchhHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 291 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 291 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
.++++.|+|.++|+++++ ++|+++.+.
T Consensus 79 ------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~~ 105 (123)
T 1oaz_A 79 ------------PGTAPKYGIRGIPTLLLF-KNGEVAATK 105 (123)
T ss_dssp ------------TTTGGGGTCCBSSEEEEE-ESSSEEEEE
T ss_pred ------------HHHHHHcCCCccCEEEEE-ECCEEEEEE
Confidence 568899999999999999 999998764
No 323
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.30 E-value=2.2e-12 Score=103.36 Aligned_cols=82 Identities=15% Similarity=0.256 Sum_probs=65.9
Q ss_pred CCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCCh
Q 014225 49 QHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDL 128 (428)
Q Consensus 49 ~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~ 128 (428)
.+++.+.....++++++|+||++||++|+.+.|.+.++++++++. +.++.|+.|..
T Consensus 9 l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~--------------------- 64 (109)
T 3tco_A 9 LTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK---AVFGRLNVDEN--------------------- 64 (109)
T ss_dssp CCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTC---------------------
T ss_pred ecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC---ceEEEEccccC---------------------
Confidence 344444333335899999999999999999999999999999764 77888776544
Q ss_pred HHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 129 ETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 129 ~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..+++.|++.++|+++++ + +|+++.+
T Consensus 65 ---~~~~~~~~i~~~Pt~~~~-~---~g~~~~~ 90 (109)
T 3tco_A 65 ---QKIADKYSVLNIPTTLIF-V---NGQLVDS 90 (109)
T ss_dssp ---HHHHHHTTCCSSSEEEEE-E---TTEEEEE
T ss_pred ---HHHHHhcCcccCCEEEEE-c---CCcEEEe
Confidence 678889999999999999 6 8977654
No 324
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.30 E-value=1.4e-11 Score=114.15 Aligned_cols=96 Identities=15% Similarity=0.313 Sum_probs=73.9
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+|||+||++|+++.|.+.++++++++. ..++.++.|+++.+. ...
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-------~~~v~~~~vd~~~~~---------------------~~~ 80 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAW-------RPALYLAALDCAEET---------------------NSA 80 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGG-------TTTEEEEEEETTSTT---------------------THH
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhc-------cCcEEEEEEeCCchh---------------------hHH
Confidence 3589999999999999999999999999999863 236999999986432 378
Q ss_pred HHHhcCcCccceEEEECCC-----CcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 305 LTKYFDVQGIPCLVIIGPE-----GKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~-----G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
+++.|+|.++||++++++. |..+... | ...+.|.+.|.+.+...
T Consensus 81 l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~--------g--------~~~~~l~~~i~~~l~~~ 129 (244)
T 3q6o_A 81 VCRDFNIPGFPTVRFFXAFTXNGSGAVFPVA--------G--------ADVQTLRERLIDALESH 129 (244)
T ss_dssp HHHHTTCCSSSEEEEECTTCCSSSCEECCCT--------T--------CCHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCccCEEEEEeCCCcCCCCeeEecC--------C--------CCHHHHHHHHHHHHHhc
Confidence 9999999999999999763 3333211 1 12467777787777654
No 325
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.30 E-value=2.4e-12 Score=102.65 Aligned_cols=71 Identities=23% Similarity=0.377 Sum_probs=61.3
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.||+++|+||++||++|+.+.|.+++++++++++ +.++.|++|.+ ..+++.|+
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~~------------------------~~~~~~~~ 68 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK---VTVAKLNVDEN------------------------PETTSQFG 68 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT---CEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---cEEEEEECcCC------------------------HHHHHHcC
Confidence 5789999999999999999999999999998764 88888877654 56888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++..
T Consensus 69 v~~~Pt~~~~-~---~G~~~~~ 86 (105)
T 1nsw_A 69 IMSIPTLILF-K---GGRPVKQ 86 (105)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CccccEEEEE-e---CCeEEEE
Confidence 9999999999 6 8977643
No 326
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.30 E-value=2.9e-12 Score=107.04 Aligned_cols=69 Identities=19% Similarity=0.372 Sum_probs=61.5
Q ss_pred CEEEEEEecCCC--hhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 62 KVTALYFSANWY--PPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 62 k~vlv~F~a~wC--~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++|||+|||+|| +||+...|.|.++.++|.++ +.++-|++|.. ..++..|+
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~---v~~~KVdvDe~------------------------~~la~~yg 86 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR---LVAAEVAAEAE------------------------RGLMARFG 86 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT---EEEEEECGGGH------------------------HHHHHHHT
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC---cEEEEEECCCC------------------------HHHHHHcC
Confidence 499999999999 99999999999999999765 88888766543 88999999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
|.++||++++. ||+++.+
T Consensus 87 V~siPTlilFk----dG~~v~~ 104 (137)
T 2qsi_A 87 VAVCPSLAVVQ----PERTLGV 104 (137)
T ss_dssp CCSSSEEEEEE----CCEEEEE
T ss_pred CccCCEEEEEE----CCEEEEE
Confidence 99999999998 8988866
No 327
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.30 E-value=3.7e-12 Score=101.50 Aligned_cols=71 Identities=21% Similarity=0.382 Sum_probs=61.9
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++++++|+||++||++|+.+.|.+.+++++++++ +.++.|+.|.+ ..+++.|+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~------------------------~~~~~~~~ 70 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK---ADILKLDVDEN------------------------PSTAAKYE 70 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEECCcC------------------------HHHHHhCC
Confidence 7899999999999999999999999999999765 88888877654 67888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|++++++ +|+++.+
T Consensus 71 v~~~Pt~~~~~----~G~~~~~ 88 (106)
T 3die_A 71 VMSIPTLIVFK----DGQPVDK 88 (106)
T ss_dssp CCSBSEEEEEE----TTEEEEE
T ss_pred CcccCEEEEEe----CCeEEEE
Confidence 99999999996 7877643
No 328
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.30 E-value=3.4e-12 Score=102.06 Aligned_cols=70 Identities=11% Similarity=0.198 Sum_probs=52.8
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++|+++|+|||+||++|+.+.|.+.++++++. ++.++.|++|.. ..+++.|+
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~~~~------------------------~~l~~~~~ 68 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN----YVEKIEILLQDM------------------------QEIAGRYA 68 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT----TEEEEEEEECCC--------------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC----CceEEEEECCCC------------------------HHHHHhcC
Confidence 57999999999999999999999999999883 288888877655 56778899
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|++++++ +|+++.+
T Consensus 69 v~~~Pt~~~~~----~G~~~~~ 86 (105)
T 4euy_A 69 VFTGPTVLLFY----NGKEILR 86 (105)
T ss_dssp -CCCCEEEEEE----TTEEEEE
T ss_pred CCCCCEEEEEe----CCeEEEE
Confidence 99999999996 7877643
No 329
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.30 E-value=1.1e-11 Score=102.82 Aligned_cols=68 Identities=18% Similarity=0.390 Sum_probs=59.4
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+|+++|+||++||++|+.+.|.+.++++++++. +.++.|++|.. ..+++.|+
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~------------------------~~l~~~~~ 86 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV---VKVGAVNADKH------------------------QSLGGQYG 86 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT---SEEEEEETTTC------------------------HHHHHHHT
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc---eEEEEEeCCCC------------------------HHHHHHcC
Confidence 4789999999999999999999999999998764 77887776543 67889999
Q ss_pred CCCCceEEEEcCCCCCCC
Q 014225 140 IEGIPCLVVLQPYDDKDD 157 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~ 157 (428)
+.++|+++++++ +|.
T Consensus 87 v~~~Pt~~~~~~---~~~ 101 (130)
T 2dml_A 87 VQGFPTIKIFGA---NKN 101 (130)
T ss_dssp CCSSSEEEEESS---CTT
T ss_pred CCccCEEEEEeC---CCC
Confidence 999999999997 665
No 330
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.30 E-value=9.4e-13 Score=115.31 Aligned_cols=102 Identities=11% Similarity=0.073 Sum_probs=64.9
Q ss_pred EecccCCCCEEEEEEecCCChhhhhhHHHH---HHHHHHHhcCCCcEEEEEEecCCChHHHHHH--HhcCCCceeccCCh
Q 014225 54 VKVSDLEGKVTALYFSANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDEDLNAFNNY--RACMPWLAVPYSDL 128 (428)
Q Consensus 54 v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~--~~~~~~~~~~~~d~ 128 (428)
+.+...+||+|+|+|||+||++|+.+.+.+ .++.+.++++ +.++.|++|...+....+ ........+.....
T Consensus 40 ~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~---~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINND---YVLITLYVDNKTPLTEPVKIMENGTERTLRTVGD 116 (172)
T ss_dssp HHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHH---CEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHH
T ss_pred HHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCC---EEEEEEecCcccccchhhhhhhcchhhhhhhhhh
Confidence 344456799999999999999999974333 4555555542 899999988764211100 00111111111011
Q ss_pred HHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 129 ETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 129 ~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
.......+.|++.++|+++|||+ +|+++.+
T Consensus 117 ~~~~~~~~~~~v~~~Pt~~lid~---~G~~~~~ 146 (172)
T 3f9u_A 117 KWSYLQRVKFGANAQPFYVLIDN---EGNPLNK 146 (172)
T ss_dssp HHHHHHHHHHSCCCSSEEEEECT---TSCBSSC
T ss_pred hhhHHHHHHcCCCCcceEEEECC---CCCEEee
Confidence 12122368999999999999999 9988865
No 331
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.30 E-value=3.7e-12 Score=97.35 Aligned_cols=64 Identities=16% Similarity=0.335 Sum_probs=55.9
Q ss_pred cEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHH
Q 014225 227 KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELT 306 (428)
Q Consensus 227 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 306 (428)
.++++.||++|||+|+++.|.|.++++++++ ++.++.|++|.+ .+++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~vd~~~~-----------------------~~~~ 49 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD----------AVEVEYINVMEN-----------------------PQKA 49 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS----------SEEEEEEESSSS-----------------------CCTT
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC----------ceEEEEEECCCC-----------------------HHHH
Confidence 5789999999999999999999999888753 489999998854 4578
Q ss_pred HhcCcCccceEEEECCCCcE
Q 014225 307 KYFDVQGIPCLVIIGPEGKT 326 (428)
Q Consensus 307 ~~~~v~~~P~~~lid~~G~i 326 (428)
+.|++.++|++++ +|++
T Consensus 50 ~~~~v~~~Pt~~~---~G~~ 66 (85)
T 1fo5_A 50 MEYGIMAVPTIVI---NGDV 66 (85)
T ss_dssp TSTTTCCSSEEEE---TTEE
T ss_pred HHCCCcccCEEEE---CCEE
Confidence 8899999999988 8887
No 332
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=3e-12 Score=107.70 Aligned_cols=77 Identities=19% Similarity=0.334 Sum_probs=64.5
Q ss_pred ccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcch
Q 014225 223 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 302 (428)
Q Consensus 223 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 302 (428)
.-++++++|+||++||++|+.+.|.|.++++++++. ++.++.|+++..
T Consensus 23 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~---------~v~~~~vd~~~~----------------------- 70 (137)
T 2dj0_A 23 RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT---------GLNFGKVDVGRY----------------------- 70 (137)
T ss_dssp HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS---------SCEEEECCTTTC-----------------------
T ss_pred cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---------CeEEEEEeCccC-----------------------
Confidence 345679999999999999999999999999998643 578888877754
Q ss_pred hHHHHhcCcC------ccceEEEECCCCcEEecccc
Q 014225 303 KELTKYFDVQ------GIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 303 ~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~ 332 (428)
.++++.|+|. ++||++++ ++|+++.+..+
T Consensus 71 ~~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~~~~G 105 (137)
T 2dj0_A 71 TDVSTRYKVSTSPLTKQLPTLILF-QGGKEAMRRPQ 105 (137)
T ss_dssp HHHHHHTTCCCCSSSSCSSEEEEE-SSSSEEEEESC
T ss_pred HHHHHHccCcccCCcCCCCEEEEE-ECCEEEEEecC
Confidence 5688889998 99999999 89998876443
No 333
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.29 E-value=1.3e-11 Score=107.93 Aligned_cols=88 Identities=15% Similarity=0.149 Sum_probs=61.4
Q ss_pred eecccccCCcEEEEEEeccCChhHHhhhHH-H--HHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccc
Q 014225 218 KVPVSSLVGKTVGLYFSARWCIPCEKFMPK-L--LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLA 294 (428)
Q Consensus 218 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~-l--~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~ 294 (428)
.+......||+|+|+|||+||++|+.+.+. + .++.+.+.+. +.++.|..|...+-...|.
T Consensus 31 a~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~----------fv~ikVD~de~~~l~~~y~------- 93 (173)
T 3ira_A 31 AFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA----------FVSIKVDREERPDIDNIYM------- 93 (173)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH----------CEEEEEETTTCHHHHHHHH-------
T ss_pred HHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc----------CceeeeCCcccCcHHHHHH-------
Confidence 344444568999999999999999999883 2 4566666554 6677777765433222221
Q ss_pred cccCCcchhHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 295 LPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 295 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
..+...+|+.++|++++++++|+++...
T Consensus 94 --------~~~q~~~gv~g~Pt~v~l~~dG~~v~~~ 121 (173)
T 3ira_A 94 --------TVCQIILGRGGWPLNIIMTPGKKPFFAG 121 (173)
T ss_dssp --------HHHHHHHSCCCSSEEEEECTTSCEEEEE
T ss_pred --------HHHHHHcCCCCCcceeeECCCCCceeee
Confidence 1122235999999999999999999863
No 334
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.28 E-value=5.5e-12 Score=101.89 Aligned_cols=72 Identities=22% Similarity=0.550 Sum_probs=59.2
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
+||+++|+||++||++|+.+.|.+.+++++++..+ +.++.|++|.. ..+++.|+
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~--~~~~~vd~~~~------------------------~~~~~~~~ 73 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSN--VSFLSIDADEN------------------------SEISELFE 73 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTT--SEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCC--EEEEEEecccC------------------------HHHHHHcC
Confidence 47999999999999999999999999999975544 88888877653 57888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++. +|+++.+
T Consensus 74 v~~~Pt~~~~~----~G~~~~~ 91 (112)
T 3d6i_A 74 ISAVPYFIIIH----KGTILKE 91 (112)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CCcccEEEEEE----CCEEEEE
Confidence 99999999884 8977653
No 335
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.28 E-value=5.3e-13 Score=116.27 Aligned_cols=86 Identities=14% Similarity=0.231 Sum_probs=64.5
Q ss_pred cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceecc
Q 014225 46 LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPY 125 (428)
Q Consensus 46 l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~ 125 (428)
..+.+ +.+.....+||+|+|+|||+||++|+.+.|.|.++.+.++.. +.++.|++|.+.+
T Consensus 32 w~~~~-~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~---~~~~~v~~d~~~~---------------- 91 (164)
T 1sen_A 32 WRTLE-DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELS---HNFVMVNLEDEEE---------------- 91 (164)
T ss_dssp BCCHH-HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH---TTSEEEEEEGGGS----------------
T ss_pred ccCHH-HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC---CeEEEEEecCCch----------------
Confidence 43444 456666678999999999999999999999999987766543 5577777765432
Q ss_pred CChHHHHHHHhhcCC--CCCceEEEEcCCCCCCCcccc
Q 014225 126 SDLETKKALNRKFDI--EGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 126 ~d~~~~~~l~~~~~v--~~~P~~~lid~~~~dG~i~~~ 161 (428)
.+...|++ .++|+++++|+ +|+++.+
T Consensus 92 -------~~~~~~~~~~~~~Pt~~~~d~---~G~~~~~ 119 (164)
T 1sen_A 92 -------PKDEDFSPDGGYIPRILFLDP---SGKVHPE 119 (164)
T ss_dssp -------CSCGGGCTTCSCSSEEEEECT---TSCBCTT
T ss_pred -------HHHHHhcccCCcCCeEEEECC---CCCEEEE
Confidence 13345666 66999999999 9988765
No 336
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.28 E-value=1.3e-11 Score=100.85 Aligned_cols=77 Identities=16% Similarity=0.377 Sum_probs=60.6
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.|++++|+||++|||+|+.+.|.|.+++++++ ..++.++++...+ .+....
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~------------~~v~~~~~~~~~~-----------------~~~~~~ 78 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK------------AHIYFINSEEPSQ-----------------LNDLQA 78 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC------------CCCEEEETTCGGG-----------------HHHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC------------CeEEEEECCCcCc-----------------HHHHHH
Confidence 46889999999999999999999999988764 3467777764321 011357
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
+++.|+|.++||++++ ++|+++.+..
T Consensus 79 ~~~~~~i~~~Pt~~~~-~~G~~~~~~~ 104 (118)
T 1zma_A 79 FRSRYGIPTVPGFVHI-TDGQINVRCD 104 (118)
T ss_dssp HHHHHTCCSSCEEEEE-ETTEEEEECC
T ss_pred HHHHcCCCCCCeEEEE-ECCEEEEEec
Confidence 8899999999999999 6898887643
No 337
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=6.8e-12 Score=103.74 Aligned_cols=66 Identities=20% Similarity=0.281 Sum_probs=57.4
Q ss_pred EEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCC
Q 014225 63 VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEG 142 (428)
Q Consensus 63 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~ 142 (428)
.++|+||++||++|+.+.|.|.++++++++.+ +.++.|++|.. ..+++.|++.+
T Consensus 24 ~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~--v~~~~vd~~~~------------------------~~~~~~~~v~~ 77 (126)
T 1x5e_A 24 DWMIEFYAPWCPACQNLQPEWESFAEWGEDLE--VNIAKVDVTEQ------------------------PGLSGRFIINA 77 (126)
T ss_dssp EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGT--CEEEEEETTTC------------------------HHHHHHTTCCS
T ss_pred CEEEEEECCCCHHHHHHhHHHHHHHHHhccCC--eEEEEEECcCC------------------------HHHHHHcCCcc
Confidence 49999999999999999999999999998644 88888876644 56888999999
Q ss_pred CceEEEEcCCCCCCCc
Q 014225 143 IPCLVVLQPYDDKDDA 158 (428)
Q Consensus 143 ~P~~~lid~~~~dG~i 158 (428)
+|+++++ + +|++
T Consensus 78 ~Pt~~~~-~---~G~~ 89 (126)
T 1x5e_A 78 LPTIYHC-K---DGEF 89 (126)
T ss_dssp SSEEEEE-E---TTEE
T ss_pred cCEEEEE-e---CCeE
Confidence 9999999 5 8875
No 338
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.28 E-value=3.9e-12 Score=97.26 Aligned_cols=63 Identities=14% Similarity=0.224 Sum_probs=54.8
Q ss_pred EEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHHH
Q 014225 228 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTK 307 (428)
Q Consensus 228 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 307 (428)
++++.||++||++|+.+.|.|.++.+++++ ++.++.|++|.+ .++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~vd~~~~-----------------------~~~~~ 49 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD----------KIDVEKIDIMVD-----------------------REKAI 49 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS----------SCCEEEECTTTC-----------------------GGGGG
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC----------CeEEEEEECCCC-----------------------HHHHH
Confidence 468999999999999999999999988864 478898888755 56788
Q ss_pred hcCcCccceEEEECCCCcE
Q 014225 308 YFDVQGIPCLVIIGPEGKT 326 (428)
Q Consensus 308 ~~~v~~~P~~~lid~~G~i 326 (428)
.|++.++|++++ +|++
T Consensus 50 ~~~v~~~Pt~~~---~G~~ 65 (85)
T 1nho_A 50 EYGLMAVPAIAI---NGVV 65 (85)
T ss_dssp GTCSSCSSEEEE---TTTE
T ss_pred hCCceeeCEEEE---CCEE
Confidence 999999999988 8887
No 339
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.27 E-value=9e-12 Score=100.55 Aligned_cols=71 Identities=24% Similarity=0.410 Sum_probs=60.8
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.||+++|+||++||++|+.+.|.+.+++++++++ +.++.|+.|.+ ..+++.|+
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~------------------------~~~~~~~~ 74 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK---IEIVKLNIDEN------------------------PGTAAKYG 74 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC---eEEEEEEcCCC------------------------HHHHHhCC
Confidence 4789999999999999999999999999998654 88888877654 57888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++.+
T Consensus 75 v~~~Pt~~~~-~---~G~~~~~ 92 (112)
T 1t00_A 75 VMSIPTLNVY-Q---GGEVAKT 92 (112)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-e---CCEEEEE
Confidence 9999998888 4 8877643
No 340
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.27 E-value=8.6e-12 Score=99.88 Aligned_cols=71 Identities=21% Similarity=0.467 Sum_probs=61.0
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+|+++|+||++||++|+.+.|.+++++++++++ +.++.|+.|.+ ..+++.|+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~------------------------~~~~~~~~ 71 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQN------------------------PGTAPKYG 71 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTC------------------------TTHHHHTT
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC---cEEEEEECCCC------------------------HHHHHHcC
Confidence 5789999999999999999999999999998764 88888877654 45778899
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++.+
T Consensus 72 v~~~Pt~~~~-~---~G~~~~~ 89 (108)
T 2trx_A 72 IRGIPTLLLF-K---NGEVAAT 89 (108)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CcccCEEEEE-e---CCEEEEE
Confidence 9999999999 5 8987643
No 341
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.27 E-value=2.6e-12 Score=106.80 Aligned_cols=81 Identities=16% Similarity=0.368 Sum_probs=64.1
Q ss_pred EEecccCCCCEEEEEEecCCChhhhhhHHHH---HHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChH
Q 014225 53 QVKVSDLEGKVTALYFSANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLE 129 (428)
Q Consensus 53 ~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~ 129 (428)
.+.++..+||+++|+||++||++|+.+.|.+ ..+.+.++.. +.++.|+.|.+..
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~-------------------- 75 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH---FVNLKMDMEKGEG-------------------- 75 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH---SEEEEECSSSTTH--------------------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC---eEEEEEecCCcch--------------------
Confidence 3455556799999999999999999999999 6666666543 6666665554222
Q ss_pred HHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 130 TKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 130 ~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..+++.|++.++|+++++++ +|+++.+
T Consensus 76 --~~~~~~~~v~~~Pt~~~~d~---~G~~~~~ 102 (130)
T 2kuc_A 76 --VELRKKYGVHAYPTLLFINS---SGEVVYR 102 (130)
T ss_dssp --HHHHHHTTCCSSCEEEEECT---TSCEEEE
T ss_pred --HHHHHHcCCCCCCEEEEECC---CCcEEEE
Confidence 78899999999999999998 9988754
No 342
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=5.2e-12 Score=106.22 Aligned_cols=75 Identities=16% Similarity=0.341 Sum_probs=61.5
Q ss_pred ccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHh
Q 014225 57 SDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 136 (428)
Q Consensus 57 ~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 136 (428)
..-++++++|+|||+||++|+.+.|.|.++++++++.+ +.++.|++|.. ..+++
T Consensus 22 ~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~--v~~~~vd~~~~------------------------~~~~~ 75 (137)
T 2dj0_A 22 ERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTG--LNFGKVDVGRY------------------------TDVST 75 (137)
T ss_dssp HHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSS--CEEEECCTTTC------------------------HHHHH
T ss_pred hcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCccC------------------------HHHHH
Confidence 34456799999999999999999999999999997643 77777766543 56778
Q ss_pred hcCCC------CCceEEEEcCCCCCCCcccc
Q 014225 137 KFDIE------GIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 137 ~~~v~------~~P~~~lid~~~~dG~i~~~ 161 (428)
.|++. ++|+++++. +|+++.+
T Consensus 76 ~~~v~~~~~~~~~Pt~~~~~----~G~~~~~ 102 (137)
T 2dj0_A 76 RYKVSTSPLTKQLPTLILFQ----GGKEAMR 102 (137)
T ss_dssp HTTCCCCSSSSCSSEEEEES----SSSEEEE
T ss_pred HccCcccCCcCCCCEEEEEE----CCEEEEE
Confidence 88888 999999995 7987754
No 343
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.27 E-value=8.8e-12 Score=104.79 Aligned_cols=68 Identities=12% Similarity=0.079 Sum_probs=57.0
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
+|++|+|+||++||++|+.+.|.|.++++++. ++.++.|+++..
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-----------~v~~~~vd~~~~------------------------- 72 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-----------ETKFVKAIVNSC------------------------- 72 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-----------SEEEEEECCSSS-------------------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-----------CcEEEEEEhhcC-------------------------
Confidence 36899999999999999999999999988763 477888877643
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
.+.|+|.++||++++ ++|+++.+.
T Consensus 73 -~~~~~i~~~Pt~~~~-~~G~~v~~~ 96 (135)
T 2dbc_A 73 -IEHYHDNCLPTIFVY-KNGQIEGKF 96 (135)
T ss_dssp -CSSCCSSCCSEEEEE-SSSSCSEEE
T ss_pred -cccCCCCCCCEEEEE-ECCEEEEEE
Confidence 157999999999999 599887764
No 344
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.27 E-value=8.6e-12 Score=100.65 Aligned_cols=72 Identities=14% Similarity=0.257 Sum_probs=58.8
Q ss_pred CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhc
Q 014225 59 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 138 (428)
Q Consensus 59 ~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 138 (428)
.+||+++|+||++||++|+.+.|.|.++++++++ +.++.|+.|.. . ..+++.|
T Consensus 22 ~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~----v~~~~vd~~~~---------------------~--~~~~~~~ 74 (111)
T 2pu9_C 22 AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD----VIFLKLDCNQE---------------------N--KTLAKEL 74 (111)
T ss_dssp CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSST---------------------T--HHHHHHH
T ss_pred cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC----eEEEEEecCcc---------------------h--HHHHHHc
Confidence 4689999999999999999999999999999853 77887776521 1 6788999
Q ss_pred CCCCCceEEEEcCCCCCCCcccc
Q 014225 139 DIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 139 ~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++.++|+++ +.+ +|+++.+
T Consensus 75 ~v~~~Pt~~-~~~---~G~~~~~ 93 (111)
T 2pu9_C 75 GIRVVPTFK-ILK---ENSVVGE 93 (111)
T ss_dssp CCSBSSEEE-EES---SSSEEEE
T ss_pred CCCeeeEEE-EEe---CCcEEEE
Confidence 999999955 556 8987643
No 345
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.27 E-value=7.1e-12 Score=105.91 Aligned_cols=71 Identities=11% Similarity=0.174 Sum_probs=61.1
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.. ..+++.|+
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~------------------------~~l~~~~~ 75 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS---AVFGRINIATN------------------------PWTAEKYG 75 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEETTTC------------------------HHHHHHHT
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc---eEEEEEECCcC------------------------HhHHHHCC
Confidence 4799999999999999999999999999999874 88888876544 67888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++. +|+++.+
T Consensus 76 v~~~Pt~~~~~----~G~~~~~ 93 (140)
T 3hz4_A 76 VQGTPTFKFFC----HGRPVWE 93 (140)
T ss_dssp CCEESEEEEEE----TTEEEEE
T ss_pred CCcCCEEEEEe----CCcEEEE
Confidence 99999999884 7877643
No 346
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.26 E-value=1.2e-11 Score=102.36 Aligned_cols=71 Identities=20% Similarity=0.390 Sum_probs=60.6
Q ss_pred CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhc
Q 014225 59 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 138 (428)
Q Consensus 59 ~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 138 (428)
.+||+++|+||++||++|+.+.|.|++++++++ + +.++.|++|.. ..+++.|
T Consensus 36 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~--v~~~~vd~d~~------------------------~~l~~~~ 87 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--N--VLFLKVDTDEL------------------------KSVASDW 87 (124)
T ss_dssp HTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--S--EEEEEEETTTS------------------------HHHHHHT
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--C--cEEEEEECccC------------------------HHHHHHc
Confidence 368999999999999999999999999999985 3 88888877543 6788999
Q ss_pred CCCCCceEEEEcCCCCCCCcccc
Q 014225 139 DIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 139 ~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++.++|+++++ + +|+++.+
T Consensus 88 ~v~~~Pt~~~~-~---~G~~~~~ 106 (124)
T 1xfl_A 88 AIQAMPTFMFL-K---EGKILDK 106 (124)
T ss_dssp TCCSSSEEEEE-E---TTEEEEE
T ss_pred CCCccCEEEEE-E---CCEEEEE
Confidence 99999998888 5 8987654
No 347
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.26 E-value=3.7e-12 Score=107.04 Aligned_cols=77 Identities=19% Similarity=0.227 Sum_probs=60.2
Q ss_pred EEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHHH
Q 014225 228 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTK 307 (428)
Q Consensus 228 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 307 (428)
+++|+||++||++|+.+.|.|.+++++++ +.++.|+++..... ...+...++++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~------------v~~~~vd~~~~~~~--------------~~~d~~~~l~~ 86 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD------------VPIVMFIWGSLIGE--------------RELSAARLEMN 86 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC------------SCEEEEEECTTCCH--------------HHHHHHHHHHH
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC------------CEEEEEECCCchhh--------------hhhhhhHHHHH
Confidence 89999999999999999999999887653 57888888543211 00122478899
Q ss_pred hcCcCccceEEEECCCCcEEeccc
Q 014225 308 YFDVQGIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 308 ~~~v~~~P~~~lid~~G~i~~~~~ 331 (428)
.|+|.++||+++++ +|+++.+..
T Consensus 87 ~~~v~~~Pt~~~~~-~G~~v~~~~ 109 (135)
T 3emx_A 87 KAGVEGTPTLVFYK-EGRIVDKLV 109 (135)
T ss_dssp HHTCCSSSEEEEEE-TTEEEEEEE
T ss_pred HcCCceeCeEEEEc-CCEEEEEEe
Confidence 99999999988885 999988743
No 348
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.26 E-value=1.3e-11 Score=98.70 Aligned_cols=71 Identities=20% Similarity=0.403 Sum_probs=60.7
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+|+++|+||++||++|+.+.|.+++++++++++ +.++.|+.|.+ ..+++.|+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~------------------------~~~~~~~~ 70 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK---LKCVKLNTDES------------------------PNVASEYG 70 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC------------------------HHHHHHHT
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc---eEEEEEECCCC------------------------HHHHHHCC
Confidence 4789999999999999999999999999998764 88888877654 57888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++.+
T Consensus 71 v~~~Pt~~~~-~---~G~~~~~ 88 (107)
T 1dby_A 71 IRSIPTIMVF-K---GGKKCET 88 (107)
T ss_dssp CCSSCEEEEE-S---SSSEEEE
T ss_pred CCcCCEEEEE-e---CCEEEEE
Confidence 9999998888 5 8887643
No 349
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.26 E-value=7.8e-12 Score=103.23 Aligned_cols=80 Identities=21% Similarity=0.431 Sum_probs=62.1
Q ss_pred cCCcEEEEEEecc-------CChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccc
Q 014225 224 LVGKTVGLYFSAR-------WCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALP 296 (428)
Q Consensus 224 ~~gk~vll~F~a~-------wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~ 296 (428)
..|++++|+||++ ||++|+.+.|.|.++++++++ ++.++.|+++... .|.
T Consensus 22 ~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~----------~~~~~~vd~~~~~-~~~------------ 78 (123)
T 1wou_A 22 HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE----------GCVFIYCQVGEKP-YWK------------ 78 (123)
T ss_dssp TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT----------TEEEEEEECCCHH-HHH------------
T ss_pred hCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC----------CcEEEEEECCCch-hhh------------
Confidence 3589999999999 999999999999998887653 4889999886321 110
Q ss_pred cCCcchhHHHHhcCcCccceEEEECCCCcEEec
Q 014225 297 FGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 297 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 329 (428)
|....+++.|+|.++||+++++..+++...
T Consensus 79 ---d~~~~~~~~~~i~~~Pt~~~~~~~~~~~g~ 108 (123)
T 1wou_A 79 ---DPNNDFRKNLKVTAVPTLLKYGTPQKLVES 108 (123)
T ss_dssp ---CTTCHHHHHHCCCSSSEEEETTSSCEEEGG
T ss_pred ---chhHHHHHHCCCCeeCEEEEEcCCceEecc
Confidence 123678889999999999999775555443
No 350
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.26 E-value=1.1e-11 Score=101.63 Aligned_cols=71 Identities=15% Similarity=0.352 Sum_probs=61.1
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.||+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.+ ..+++.|+
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~---v~~~~vd~d~~------------------------~~l~~~~~ 82 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK---VVMAKVDIDDH------------------------TDLAIEYE 82 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS---SEEEEEETTTT------------------------HHHHHHTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEeCCCC------------------------HHHHHHcC
Confidence 4789999999999999999999999999998653 88888877643 57889999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++..
T Consensus 83 v~~~Pt~~~~-~---~G~~~~~ 100 (119)
T 1w4v_A 83 VSAVPTVLAM-K---NGDVVDK 100 (119)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-e---CCcEEEE
Confidence 9999999999 6 8987643
No 351
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.26 E-value=7e-12 Score=113.55 Aligned_cols=89 Identities=15% Similarity=0.246 Sum_probs=70.5
Q ss_pred ccCc-cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCC
Q 014225 42 DRDY-LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPW 120 (428)
Q Consensus 42 ~pdf-l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~ 120 (428)
.+++ +.+.+++.+.....+|++++|+||++||++|+.+.|.+.++++++++. +.++.|++|..
T Consensus 94 ~~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~---v~~~~vd~~~~------------- 157 (210)
T 3apq_A 94 DDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL---LRIGAVNCGDD------------- 157 (210)
T ss_dssp TTCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT---BEEEEEETTTC-------------
T ss_pred CCCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc---eEEEEEECCcc-------------
Confidence 3444 555555555444457899999999999999999999999999998654 88888876544
Q ss_pred ceeccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 121 LAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 121 ~~~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..+++.|++.++|+++++ + +|+++..
T Consensus 158 -----------~~l~~~~~v~~~Pt~~~~-~---~G~~~~~ 183 (210)
T 3apq_A 158 -----------RMLCRMKGVNSYPSLFIF-R---SGMAAVK 183 (210)
T ss_dssp -----------HHHHHHTTCCSSSEEEEE-C---TTSCCEE
T ss_pred -----------HHHHHHcCCCcCCeEEEE-E---CCCceeE
Confidence 578889999999999999 5 8877543
No 352
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.26 E-value=2e-12 Score=105.30 Aligned_cols=72 Identities=22% Similarity=0.462 Sum_probs=60.4
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+||++||++|+.+.|.+.+++++++.. +.++.++.|+++.+ ..
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-------~~~v~~~~vd~~~~-----------------------~~ 72 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAE-------GSEIRLAKVDATEE-----------------------SD 72 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTT-------CCCCBCEEEETTTC-----------------------CS
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhcc-------CCcEEEEEEcCCCC-----------------------HH
Confidence 5789999999999999999999999999988754 33577777777643 46
Q ss_pred HHHhcCcCccceEEEECCCCcEE
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTV 327 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~ 327 (428)
+++.|+|.++|+++++ ++|+++
T Consensus 73 ~~~~~~v~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 73 LAQQYGVRGYPTIKFF-RNGDTA 94 (120)
T ss_dssp SHHHHTCCSSSEEEEE-ESSCSS
T ss_pred HHHHCCCCcccEEEEE-eCCCcC
Confidence 7889999999999999 788754
No 353
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.25 E-value=7.4e-12 Score=104.20 Aligned_cols=83 Identities=17% Similarity=0.339 Sum_probs=65.8
Q ss_pred cCCCCEEeccc-CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccC
Q 014225 48 NQHGTQVKVSD-LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYS 126 (428)
Q Consensus 48 ~~~G~~v~l~~-~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~ 126 (428)
..+++.+.... -.+|+++|+||++||++|+.+.|.+++++++++++ +.++.|++|.+
T Consensus 26 ~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~~~~------------------- 83 (128)
T 2o8v_B 26 HLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK---LTVAKLNIDQN------------------- 83 (128)
T ss_dssp EECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT---EEEEEEETTTC-------------------
T ss_pred ecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEECCCC-------------------
Confidence 33444444222 25799999999999999999999999999998764 88888887654
Q ss_pred ChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 127 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 127 d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..+++.|++.++|+++++ + +|+++..
T Consensus 84 -----~~l~~~~~v~~~Pt~~~~-~---~G~~~~~ 109 (128)
T 2o8v_B 84 -----PGTAPKYGIRGIPTLLLF-K---NGEVAAT 109 (128)
T ss_dssp -----CTTSGGGTCCSSSEEEEE-E---TTEEEEE
T ss_pred -----HHHHHHcCCCccCEEEEE-e---CCEEEEE
Confidence 356778999999999999 6 8987643
No 354
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.25 E-value=1.3e-11 Score=98.85 Aligned_cols=69 Identities=9% Similarity=0.137 Sum_probs=59.1
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++|+++|+||++||++|+.+.|.+.+++++++ ++.++.|++|.. ..+++.|+
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~------------------------~~~~~~~~ 71 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP----QAVFLEVDVHQC------------------------QGTAATNN 71 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTS------------------------HHHHHHTT
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC----CcEEEEEECccC------------------------HHHHHhcC
Confidence 57999999999999999999999999999983 278888877644 56888999
Q ss_pred CCCCceEEEEcCCCCCCCccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATL 160 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~ 160 (428)
+.++|+++++. +|+++.
T Consensus 72 v~~~Pt~~~~~----~G~~~~ 88 (107)
T 1gh2_A 72 ISATPTFQFFR----NKVRID 88 (107)
T ss_dssp CCSSSEEEEEE----TTEEEE
T ss_pred CCcccEEEEEE----CCeEEE
Confidence 99999999994 787664
No 355
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.25 E-value=1.4e-11 Score=99.08 Aligned_cols=70 Identities=24% Similarity=0.467 Sum_probs=60.8
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++++|.||++||++|+.+.|.+.+++++++++ +.++.|++|.. ..+++.|+
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~---v~~~~vd~~~~------------------------~~l~~~~~ 73 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES---FGFYYVDVEEE------------------------KTLFQRFS 73 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc---eEEEEEECCcC------------------------hhHHHhcC
Confidence 5789999999999999999999999999998764 88888877644 67889999
Q ss_pred CCCCceEEEEcCCCCCCCccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATL 160 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~ 160 (428)
+.++|+++++. +|+++.
T Consensus 74 v~~~Pt~~~~~----~g~~~~ 90 (111)
T 3gnj_A 74 LKGVPQILYFK----DGEYKG 90 (111)
T ss_dssp CCSSCEEEEEE----TTEEEE
T ss_pred CCcCCEEEEEE----CCEEEE
Confidence 99999999995 787654
No 356
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=1.3e-11 Score=102.77 Aligned_cols=68 Identities=19% Similarity=0.402 Sum_probs=57.1
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcC-CCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhc
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNN-GSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 138 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 138 (428)
.+++++|+||++||++|+.+.|.+.++++++++. ..++.++.|+.|.. ..+++.|
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~------------------------~~l~~~~ 79 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVN------------------------QVLASRY 79 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTC------------------------CHHHHHH
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCC------------------------HHHHHhC
Confidence 4789999999999999999999999999999731 01288888776543 5788899
Q ss_pred CCCCCceEEEEcC
Q 014225 139 DIEGIPCLVVLQP 151 (428)
Q Consensus 139 ~v~~~P~~~lid~ 151 (428)
++.++|+++++++
T Consensus 80 ~v~~~Pt~~~~~~ 92 (133)
T 1x5d_A 80 GIRGFPTIKIFQK 92 (133)
T ss_dssp TCCSSSEEEEEET
T ss_pred CCCeeCeEEEEeC
Confidence 9999999999994
No 357
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.24 E-value=5.7e-12 Score=105.65 Aligned_cols=76 Identities=16% Similarity=0.305 Sum_probs=58.2
Q ss_pred CCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChH
Q 014225 50 HGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLE 129 (428)
Q Consensus 50 ~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~ 129 (428)
++-...++..+||+++|+||++||++|+.+.|.|+++++++ + +.++.|++|..
T Consensus 29 ~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~--v~~~~vd~~~~---------------------- 81 (133)
T 3cxg_A 29 GSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---Y--VTLVDIDVDIH---------------------- 81 (133)
T ss_dssp THHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---E--CEEEEEETTTC----------------------
T ss_pred hHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---C--EEEEEEeccch----------------------
Confidence 33334456667899999999999999999999998887665 2 56666655432
Q ss_pred HHHHHHhhcCCCCCceEEEE-cCCCCCCC
Q 014225 130 TKKALNRKFDIEGIPCLVVL-QPYDDKDD 157 (428)
Q Consensus 130 ~~~~l~~~~~v~~~P~~~li-d~~~~dG~ 157 (428)
..+++.|++.++|+++++ ++ +|+
T Consensus 82 --~~l~~~~~v~~~Pt~~~~~~~---~g~ 105 (133)
T 3cxg_A 82 --PKLNDQHNIKALPTFEFYFNL---NNE 105 (133)
T ss_dssp --HHHHHHTTCCSSSEEEEEEEE---TTE
T ss_pred --HHHHHhcCCCCCCEEEEEEec---CCC
Confidence 678899999999999999 45 564
No 358
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.24 E-value=2.1e-11 Score=97.24 Aligned_cols=71 Identities=18% Similarity=0.368 Sum_probs=61.6
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++++|.||++||++|+.+.|.+.+++++++++ +.++.|++|.. ..+++.|+
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~------------------------~~~~~~~~ 71 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGK---VTVAKVNIDDN------------------------PETPNAYQ 71 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTS---EEEEEEETTTC------------------------CHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCc---EEEEEEECCCC------------------------HHHHHhcC
Confidence 5789999999999999999999999999999763 88888877654 46788899
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++..
T Consensus 72 v~~~Pt~~~~-~---~G~~~~~ 89 (107)
T 2i4a_A 72 VRSIPTLMLV-R---DGKVIDK 89 (107)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCccCEEEEE-e---CCEEEEE
Confidence 9999999999 6 8987643
No 359
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.24 E-value=1.4e-11 Score=106.19 Aligned_cols=71 Identities=17% Similarity=0.360 Sum_probs=61.7
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++++|+||++||++|+.+.|.|++++++++++ +.++.|+.|.. ..+++.|+
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~---v~~~~vd~~~~------------------------~~l~~~~~ 115 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ---VRLAKIDTQAH------------------------PAVAGRHR 115 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTS------------------------THHHHHTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC---EEEEEEeCCcc------------------------HHHHHHcC
Confidence 5789999999999999999999999999999764 88888877644 56888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++.+
T Consensus 116 i~~~Pt~~~~-~---~G~~~~~ 133 (155)
T 2ppt_A 116 IQGIPAFILF-H---KGRELAR 133 (155)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcCCEEEEE-e---CCeEEEE
Confidence 9999999999 4 8977643
No 360
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.23 E-value=1.9e-11 Score=98.89 Aligned_cols=71 Identities=20% Similarity=0.421 Sum_probs=62.0
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++++|.||++||++|+.+.|.|.+++++++++ +.++.|++|.+ ..+++.|+
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~~------------------------~~~~~~~~ 76 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR---LKVVKLEIDPN------------------------PTTVKKYK 76 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEESTTC------------------------HHHHHHTT
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc---EEEEEEEcCCC------------------------HHHHHHcC
Confidence 5789999999999999999999999999998764 88888877654 57888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++..
T Consensus 77 v~~~Pt~~~~-~---~G~~~~~ 94 (115)
T 1thx_A 77 VEGVPALRLV-K---GEQILDS 94 (115)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCceeEEEEE-c---CCEEEEE
Confidence 9999999999 6 8987653
No 361
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.23 E-value=1.2e-11 Score=117.42 Aligned_cols=72 Identities=15% Similarity=0.300 Sum_probs=62.7
Q ss_pred CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhc
Q 014225 59 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 138 (428)
Q Consensus 59 ~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 138 (428)
.+||+|+|+||++||++|+.+.|.+.+++++++++ +.++.|++|.. ..+++.|
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~---~~~~~vd~~~~------------------------~~~~~~~ 76 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ---FILAKLDCDAE------------------------QMIAAQF 76 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS---SEEEEEETTTC------------------------HHHHHTT
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC---eEEEEEeCccC------------------------HHHHHHc
Confidence 35899999999999999999999999999999864 88888877654 6788999
Q ss_pred CCCCCceEEEEcCCCCCCCcccc
Q 014225 139 DIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 139 ~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+|.++||++++. +|+++.+
T Consensus 77 ~v~~~Pt~~~~~----~G~~~~~ 95 (287)
T 3qou_A 77 GLRAIPTVYLFQ----NGQPVDG 95 (287)
T ss_dssp TCCSSSEEEEEE----TTEEEEE
T ss_pred CCCCCCeEEEEE----CCEEEEE
Confidence 999999999995 7977653
No 362
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.23 E-value=1.5e-11 Score=97.92 Aligned_cols=72 Identities=18% Similarity=0.347 Sum_probs=60.5
Q ss_pred cCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhh
Q 014225 58 DLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRK 137 (428)
Q Consensus 58 ~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 137 (428)
+.++|+++|+||++||++|+.+.|.+.++++++++ +.++.|+.|.. ..+++.
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~vd~~~~------------------------~~~~~~ 68 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN----VIFLEVDVDDC------------------------QDVASE 68 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT----SEEEEEETTTC------------------------HHHHHH
T ss_pred hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC----eEEEEEEhhhh------------------------HHHHHH
Confidence 34689999999999999999999999999998854 77887766544 678889
Q ss_pred cCCCCCceEEEEcCCCCCCCcccc
Q 014225 138 FDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 138 ~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
|++.++|+++++. +|+++.+
T Consensus 69 ~~v~~~Pt~~~~~----~g~~~~~ 88 (105)
T 3m9j_A 69 SEVKSMPTFQFFK----KGQKVGE 88 (105)
T ss_dssp TTCCBSSEEEEEE----TTEEEEE
T ss_pred cCCCcCcEEEEEE----CCeEEEE
Confidence 9999999999995 7876643
No 363
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.23 E-value=2e-11 Score=100.21 Aligned_cols=68 Identities=18% Similarity=0.231 Sum_probs=59.3
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+|+++|+||++||++|+.+.|.+.+++++++++ +.++.|++|.. ..+++.|+
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~------------------------~~~~~~~~ 72 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGK---VRAGKVDCQAY------------------------PQTCQKAG 72 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEeCcCC------------------------HHHHHHcC
Confidence 4789999999999999999999999999999763 88888877644 56888999
Q ss_pred CCCCceEEEEcCCCCCCC
Q 014225 140 IEGIPCLVVLQPYDDKDD 157 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~ 157 (428)
+.++|+++++++ +|.
T Consensus 73 v~~~Pt~~~~~~---~~~ 87 (122)
T 3aps_A 73 IKAYPSVKLYQY---ERA 87 (122)
T ss_dssp CCSSSEEEEEEE---EGG
T ss_pred CCccceEEEEeC---CCc
Confidence 999999999986 554
No 364
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.22 E-value=2.3e-11 Score=99.02 Aligned_cols=70 Identities=16% Similarity=0.334 Sum_probs=59.3
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
+||+++|+||++||++|+.+.|.|+++++++++ +.++.|++|.. ..+++.|+
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~----v~~~~vd~~~~------------------------~~l~~~~~ 80 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD----VRFVKCDVDES------------------------PDIAKECE 80 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT----SEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCC------------------------HHHHHHCC
Confidence 579999999999999999999999999998754 77888776544 57888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++.+
T Consensus 81 v~~~Pt~~~~-~---~G~~~~~ 98 (114)
T 2oe3_A 81 VTAMPTFVLG-K---DGQLIGK 98 (114)
T ss_dssp CCSBSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-e---CCeEEEE
Confidence 9999998887 5 8977643
No 365
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.22 E-value=2e-11 Score=98.38 Aligned_cols=70 Identities=17% Similarity=0.273 Sum_probs=59.8
Q ss_pred CCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCC
Q 014225 61 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 140 (428)
Q Consensus 61 gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 140 (428)
+|+++|+||++||++|+.+.|.|.++++++++. +.++.|+.|.. ..+++.|++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~vd~~~~------------------------~~~~~~~~v 76 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGK---VIFLKVDVDAV------------------------AAVAEAAGI 76 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTT------------------------HHHHHHHTC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCC---eEEEEEECCch------------------------HHHHHHcCC
Confidence 789999999999999999999999999998753 88888877543 678899999
Q ss_pred CCCceEEEEcCCCCCCCcccc
Q 014225 141 EGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 141 ~~~P~~~lid~~~~dG~i~~~ 161 (428)
.++|+++++ + +|+++.+
T Consensus 77 ~~~Pt~~~~-~---~G~~~~~ 93 (112)
T 1ep7_A 77 TAMPTFHVY-K---DGVKADD 93 (112)
T ss_dssp CBSSEEEEE-E---TTEEEEE
T ss_pred CcccEEEEE-E---CCeEEEE
Confidence 999998777 5 8977643
No 366
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.21 E-value=4.2e-11 Score=95.27 Aligned_cols=72 Identities=26% Similarity=0.481 Sum_probs=60.8
Q ss_pred CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhc
Q 014225 59 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 138 (428)
Q Consensus 59 ~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 138 (428)
.++++++|.||++||++|+.+.|.++++++++++. +.++.|+.|.. ..+++.|
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~------------------------~~~~~~~ 70 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFADN---VVVLKVDVDEC------------------------EDIAMEY 70 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTC------------------------HHHHHHT
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCC---eEEEEEeccch------------------------HHHHHHc
Confidence 46899999999999999999999999999998643 88888877643 6788899
Q ss_pred CCCCCceEEEEcCCCCCCCcccc
Q 014225 139 DIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 139 ~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++.++|+++++. +|+++.+
T Consensus 71 ~v~~~Pt~~~~~----~G~~~~~ 89 (106)
T 1xwb_A 71 NISSMPTFVFLK----NGVKVEE 89 (106)
T ss_dssp TCCSSSEEEEEE----TTEEEEE
T ss_pred CCCcccEEEEEc----CCcEEEE
Confidence 999999987774 7876643
No 367
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.21 E-value=1.5e-11 Score=107.37 Aligned_cols=116 Identities=9% Similarity=0.242 Sum_probs=89.1
Q ss_pred cccccccCc-cccCCC--CEEeccc-CCCCEEEEEEe-cCCChhhhhhHHHHHHHHHHHhcCCCcEE-EEEEecCCChHH
Q 014225 37 LLASKDRDY-LLNQHG--TQVKVSD-LEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFE-VVFVSSDEDLNA 110 (428)
Q Consensus 37 ~~g~~~pdf-l~~~~G--~~v~l~~-~~gk~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~-ii~vs~D~~~~~ 110 (428)
.+|+.+||| |.+ +| ++++|++ ++||.++|+|| +.|||.|..+++.+++.+++|++.| ++ |++||.|....
T Consensus 15 ~vGd~aPdf~l~~-~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~g--v~~VigIS~D~~~~- 90 (171)
T 2xhf_A 15 KVGDIIPDVLVYE-DVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEG--YHTIACIAVNDPFV- 90 (171)
T ss_dssp CTTCBCCCCEEEC-SSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTT--CCEEEEEESSCHHH-
T ss_pred cCcCCCCCeEEec-CCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC--CCEEEEEeCCCHHH-
Confidence 479999999 874 44 8999999 49998888888 7899999999999999999999988 85 99999986543
Q ss_pred HHHHHhcCCC--ceeccCChHHHHHHHhhcCCC-----------CCceEEEEcCCCCCCCccccc
Q 014225 111 FNNYRACMPW--LAVPYSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 111 ~~~~~~~~~~--~~~~~~d~~~~~~l~~~~~v~-----------~~P~~~lid~~~~dG~i~~~~ 162 (428)
.++|.++.+. .....+|.+ .+++++||+. ..-.++||+ +|+|+...
T Consensus 91 ~~~w~~~~~~~~~f~lLSD~~--~~~a~ayGv~~~~~~~g~g~~~~R~tfvId----dG~V~~~~ 149 (171)
T 2xhf_A 91 MAAWGKTVDPEHKIRMLADMH--GEFTRALGTELDSSKMLGNNRSRRYAMLID----DNKIRSVS 149 (171)
T ss_dssp HHHHHHHHCTTCCSEEEECTT--SHHHHHHTCBCCCHHHHSSCCBCCEEEEEE----TTEEEEEE
T ss_pred HHHHHHhcCCCCCeEEEEeCC--chHHHHhCCceeccccCCCcceEEEEEEEe----CCEEEEEE
Confidence 5555554443 122233544 7899999873 235678886 89887663
No 368
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.85 E-value=1.1e-12 Score=109.02 Aligned_cols=81 Identities=23% Similarity=0.442 Sum_probs=66.0
Q ss_pred CCEEecccCCCCEEEEEEecCCChhhhhhHHHH---HHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCC
Q 014225 51 GTQVKVSDLEGKVTALYFSANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSD 127 (428)
Q Consensus 51 G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d 127 (428)
.+.+.+...+||+++|+||++||++|+.+.|.+ .++.+.++++ +.++.|++|.+..
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~------------------ 67 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEAR---FVVASVSVDTPEG------------------ 67 (130)
Confidence 567888888999999999999999999999999 8888877653 7777776643321
Q ss_pred hHHHHHHHhhcCCCCCceEEEEcCCCCCCCc
Q 014225 128 LETKKALNRKFDIEGIPCLVVLQPYDDKDDA 158 (428)
Q Consensus 128 ~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i 158 (428)
..+++.|++.++|+++++|+ .+|++
T Consensus 68 ----~~~~~~~~v~~~Pt~~~~d~--~~G~~ 92 (130)
T 2lst_A 68 ----QELARRYRVPGTPTFVFLVP--KAGAW 92 (130)
Confidence 67889999999999999985 15776
No 369
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.21 E-value=2.1e-11 Score=96.86 Aligned_cols=71 Identities=18% Similarity=0.397 Sum_probs=60.2
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++++|.||++||++|+.+.|.+.+++++++++ +.++.|+.|.. ..+++.|+
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~------------------------~~~~~~~~ 69 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK---IAVYKLNTDEA------------------------PGIATQYN 69 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc---eEEEEEcCcch------------------------HHHHHhCC
Confidence 4789999999999999999999999999998764 78888776644 57888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++. +|+++..
T Consensus 70 v~~~Pt~~~~~----~g~~~~~ 87 (105)
T 1fb6_A 70 IRSIPTVLFFK----NGERKES 87 (105)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CCcccEEEEEe----CCeEEEE
Confidence 99999988884 7877643
No 370
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.21 E-value=1.8e-11 Score=100.20 Aligned_cols=78 Identities=18% Similarity=0.396 Sum_probs=62.8
Q ss_pred cccCCCCEEecc-cC--CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCce
Q 014225 46 LLNQHGTQVKVS-DL--EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLA 122 (428)
Q Consensus 46 l~~~~G~~v~l~-~~--~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~ 122 (428)
+.+.+|....+. .+ .||+++|+||++||++|+.+.|.|.++++++ .+ +.++.|++|..
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~--v~~~~vd~~~~--------------- 65 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KD--VTFIKVDVDKN--------------- 65 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TT--SEEEEEETTTC---------------
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CC--eEEEEEECCCC---------------
Confidence 344555555554 22 4899999999999999999999999999998 23 88888877654
Q ss_pred eccCChHHHHHHHhhcCCCCCceEEEEcC
Q 014225 123 VPYSDLETKKALNRKFDIEGIPCLVVLQP 151 (428)
Q Consensus 123 ~~~~d~~~~~~l~~~~~v~~~P~~~lid~ 151 (428)
..+++.|++.++|++++++.
T Consensus 66 ---------~~~~~~~~i~~~Pt~~~~~~ 85 (118)
T 2f51_A 66 ---------GNAADAYGVSSIPALFFVKK 85 (118)
T ss_dssp ---------HHHHHHTTCCSSSEEEEEEE
T ss_pred ---------HHHHHhcCCCCCCEEEEEeC
Confidence 56888999999999999974
No 371
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.21 E-value=8.6e-12 Score=105.85 Aligned_cols=89 Identities=11% Similarity=0.141 Sum_probs=61.0
Q ss_pred cEEEEEEeccC--ChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEE--EEEEEcCCCHHHHHHHHhcCCccccccCCcch
Q 014225 227 KTVGLYFSARW--CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFE--VVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 302 (428)
Q Consensus 227 k~vll~F~a~w--C~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~--iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 302 (428)
+.++|+||++| |++|+.+.|.|.+++++| ++ +. ++.|++|.+
T Consensus 35 ~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~----------v~~~~~~Vd~d~~----------------------- 80 (142)
T 2es7_A 35 GDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQ----------FDWQVAVADLEQS----------------------- 80 (142)
T ss_dssp CSEEEEECCCSCC----CCHHHHHHHHHHTC-TT----------SCCEEEEECHHHH-----------------------
T ss_pred CCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cc----------cceeEEEEECCCC-----------------------
Confidence 45788899877 999999999999999988 44 66 888877633
Q ss_pred hHHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 303 KELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 303 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
.++++.|+|.++||++++ ++|+++.+..| . .+ .++|.+.|++++...
T Consensus 81 ~~la~~~~V~~iPT~~~f-k~G~~v~~~~G-------~----~~---~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 81 EAIGDRFNVRRFPATLVF-TDGKLRGALSG-------I----HP---WAELLTLMRSIVDTP 127 (142)
T ss_dssp HHHHHTTTCCSSSEEEEE-SCC----CEES-------C----CC---HHHHHHHHHHHHC--
T ss_pred HHHHHhcCCCcCCeEEEE-eCCEEEEEEeC-------C----CC---HHHHHHHHHHHhccc
Confidence 678999999999999999 99999877432 1 12 256677777776543
No 372
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.21 E-value=2.5e-11 Score=97.48 Aligned_cols=73 Identities=14% Similarity=0.315 Sum_probs=60.2
Q ss_pred CCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCC
Q 014225 61 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 140 (428)
Q Consensus 61 gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 140 (428)
+++++|+||++||++|+.+.|.+.++++++.....++.++.|+.|.. ..+++.|++
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~------------------------~~l~~~~~v 76 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE------------------------RNICSKYSV 76 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC------------------------HHHHHHTTC
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc------------------------HhHHHhcCC
Confidence 78999999999999999999999999998865533478887766544 578899999
Q ss_pred CCCceEEEEcCCCCCCCcccc
Q 014225 141 EGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 141 ~~~P~~~lid~~~~dG~i~~~ 161 (428)
.++|+++++. +|+++.+
T Consensus 77 ~~~Pt~~~~~----~g~~~~~ 93 (111)
T 3uvt_A 77 RGYPTLLLFR----GGKKVSE 93 (111)
T ss_dssp CSSSEEEEEE----TTEEEEE
T ss_pred CcccEEEEEe----CCcEEEe
Confidence 9999999885 7866543
No 373
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.20 E-value=2.3e-11 Score=99.36 Aligned_cols=75 Identities=20% Similarity=0.467 Sum_probs=58.6
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.|++++|+||++||++|+.+.|.|.+++++++. .+.++++|... +.+....+++.|+
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-----~v~~~~~~~~~------------------~~~~~~~~~~~~~ 84 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-----HIYFINSEEPS------------------QLNDLQAFRSRYG 84 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-----CCEEEETTCGG------------------GHHHHHHHHHHHT
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-----eEEEEECCCcC------------------cHHHHHHHHHHcC
Confidence 478999999999999999999999999998753 35566665432 1122267889999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|++++++ +|+++.+
T Consensus 85 i~~~Pt~~~~~----~G~~~~~ 102 (118)
T 1zma_A 85 IPTVPGFVHIT----DGQINVR 102 (118)
T ss_dssp CCSSCEEEEEE----TTEEEEE
T ss_pred CCCCCeEEEEE----CCEEEEE
Confidence 99999999996 7876643
No 374
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.20 E-value=1.6e-11 Score=108.49 Aligned_cols=116 Identities=9% Similarity=0.169 Sum_probs=89.0
Q ss_pred ccccccCc-ccc--C---------CC----CEEeccc-CCCCEEEEEEe-cCCChhhh-hhHHHHHHHHHHH-hcCCCcE
Q 014225 38 LASKDRDY-LLN--Q---------HG----TQVKVSD-LEGKVTALYFS-ANWYPPCG-NFTGVLVDVYEEL-RNNGSDF 97 (428)
Q Consensus 38 ~g~~~pdf-l~~--~---------~G----~~v~l~~-~~gk~vlv~F~-a~wC~~C~-~~~p~l~~l~~~~-~~~~~~~ 97 (428)
+|+.+||| |.+ . +| +++++++ ++||.++|+|| +.|||.|. .+++.+++.+++| ++.| +
T Consensus 3 vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g--~ 80 (182)
T 1xiy_A 3 ENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENN--F 80 (182)
T ss_dssp TTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSC--C
T ss_pred CCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCC--C
Confidence 58999999 877 4 67 7999998 69998877776 89999999 9999999999999 8887 8
Q ss_pred -EEEEEecCCChHHHHHHHhcCCCc-eeccCChHHHHHHHhhcCCC-----------CCceEEEEcCCCCCCCccccc
Q 014225 98 -EVVFVSSDEDLNAFNNYRACMPWL-AVPYSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHD 162 (428)
Q Consensus 98 -~ii~vs~D~~~~~~~~~~~~~~~~-~~~~~d~~~~~~l~~~~~v~-----------~~P~~~lid~~~~dG~i~~~~ 162 (428)
.|++||.|... ..++|.++++.. +...+|.+ ..++++||+. ....++||+ +|+|++..
T Consensus 81 ~~V~gvS~D~~~-~~~~~~~~~~~~~f~lLsD~~--~~~a~~yGv~~~~~~~G~g~~~~R~tfvId----dG~V~~~~ 151 (182)
T 1xiy_A 81 DDIYCITNNDIY-VLKSWFKSMDIKKIKYISDGN--SSFTDSMNMLVDKSNFFMGMRPWRFVAIVE----NNILVKMF 151 (182)
T ss_dssp SEEEEEESSCHH-HHHHHHHHTTCCSSEEEECTT--SHHHHHTTCEEECGGGTCCEEECCEEEEEE----TTEEEEEE
T ss_pred cEEEEEeCCCHH-HHHHHHHHcCCCCceEEEeCc--hHHHHHhCCceeccccCCCCceEEEEEEEc----CCEEEEEE
Confidence 49999998653 356666665532 22234544 7899999873 246788886 89988764
No 375
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.20 E-value=1.9e-11 Score=102.80 Aligned_cols=73 Identities=18% Similarity=0.385 Sum_probs=61.9
Q ss_pred ccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHh
Q 014225 57 SDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 136 (428)
Q Consensus 57 ~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 136 (428)
+..+||+++|+||++||++|+.+.|.|++++++++ + +.++.|++|.. ..+++
T Consensus 42 ~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~--v~~~~v~~~~~------------------------~~~~~ 93 (139)
T 3d22_A 42 ASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--S--LMFLVIDVDEL------------------------SDFSA 93 (139)
T ss_dssp HHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--T--SEEEEEETTTS------------------------HHHHH
T ss_pred HhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--C--CEEEEEeCccc------------------------HHHHH
Confidence 33568999999999999999999999999999984 2 78888877643 67889
Q ss_pred hcCCCCCceEEEEcCCCCCCCcccc
Q 014225 137 KFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 137 ~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
.|++.++|+++++ + +|+++.+
T Consensus 94 ~~~v~~~Pt~~~~-~---~G~~~~~ 114 (139)
T 3d22_A 94 SWEIKATPTFFFL-R---DGQQVDK 114 (139)
T ss_dssp HTTCCEESEEEEE-E---TTEEEEE
T ss_pred HcCCCcccEEEEE-c---CCeEEEE
Confidence 9999999999988 6 8987644
No 376
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.20 E-value=1.7e-11 Score=99.96 Aligned_cols=72 Identities=19% Similarity=0.408 Sum_probs=59.7
Q ss_pred ccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHh
Q 014225 57 SDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 136 (428)
Q Consensus 57 ~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 136 (428)
++.+||+++|+||++||++|+.+.|.++++++++ + +.++.|+.|.. ..+++
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~--~~~~~vd~~~~------------------------~~~~~ 79 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---D--AIFVKVDVDKL------------------------EETAR 79 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---S--SEEEEEETTTS------------------------HHHHH
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---C--cEEEEEECCcc------------------------HHHHH
Confidence 3447899999999999999999999999998887 3 77888776543 67888
Q ss_pred hcCCCCCceEEEEcCCCCCCCcccc
Q 014225 137 KFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 137 ~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
.|++.++|+++++ + +|+++.+
T Consensus 80 ~~~v~~~Pt~~~~-~---~G~~~~~ 100 (117)
T 2xc2_A 80 KYNISAMPTFIAI-K---NGEKVGD 100 (117)
T ss_dssp HTTCCSSSEEEEE-E---TTEEEEE
T ss_pred HcCCCccceEEEE-e---CCcEEEE
Confidence 9999999998887 4 7877643
No 377
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.20 E-value=7e-12 Score=105.13 Aligned_cols=72 Identities=11% Similarity=0.209 Sum_probs=60.6
Q ss_pred CCCEEEEEEecCC--ChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhh
Q 014225 60 EGKVTALYFSANW--YPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRK 137 (428)
Q Consensus 60 ~gk~vlv~F~a~w--C~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 137 (428)
.+++|||+|||+| |+||+...|.|.+++++|.++. +.++.|++|. ...++..
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~--v~~~KVdvDe------------------------~~~lA~~ 86 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYT--WQVAIADLEQ------------------------SEAIGDR 86 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSC--CEEEECCHHH------------------------HHHHHHH
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCe--EEEEEEECCC------------------------CHHHHHH
Confidence 4568999999999 9999999999999999986542 6677764442 2899999
Q ss_pred cCCCCCceEEEEcCCCCCCCcccc
Q 014225 138 FDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 138 ~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
|+|.++||++++. ||+++.+
T Consensus 87 ygV~sIPTlilFk----~G~~v~~ 106 (140)
T 2qgv_A 87 FGAFRFPATLVFT----GGNYRGV 106 (140)
T ss_dssp HTCCSSSEEEEEE----TTEEEEE
T ss_pred cCCccCCEEEEEE----CCEEEEE
Confidence 9999999999998 8988765
No 378
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.20 E-value=2.9e-11 Score=100.23 Aligned_cols=69 Identities=17% Similarity=0.353 Sum_probs=59.3
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++++++|+||++||++|+.+.|.|.+++++++ + +.++.|++|.. ..+++.|+
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~--v~~~~vd~d~~------------------------~~l~~~~~ 87 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--T--VKFAKVDADNN------------------------SEIVSKCR 87 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--T--SEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--C--CEEEEEECCCC------------------------HHHHHHcC
Confidence 67999999999999999999999999999983 2 88888877644 67888999
Q ss_pred CCCCceEEEEcCCCCCCCccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATL 160 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~ 160 (428)
+.++|+++++ + +|+++.
T Consensus 88 v~~~Pt~~i~-~---~G~~~~ 104 (125)
T 1r26_A 88 VLQLPTFIIA-R---SGKMLG 104 (125)
T ss_dssp CCSSSEEEEE-E---TTEEEE
T ss_pred CCcccEEEEE-e---CCeEEE
Confidence 9999998888 5 887764
No 379
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.20 E-value=4.5e-11 Score=95.46 Aligned_cols=70 Identities=17% Similarity=0.408 Sum_probs=60.8
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+|+++|.||++||++|+.+.|.+.+++++++++ +.++.|+.|.+ ..+++.|+
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~------------------------~~~~~~~~ 69 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK---LLVAKLDVDEN------------------------PKTAMRYR 69 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT---BEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc---eEEEEEECCCC------------------------HhHHHhCC
Confidence 4789999999999999999999999999998753 88888877654 56888999
Q ss_pred CCCCceEEEEcCCCCCCCccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATL 160 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~ 160 (428)
+.++|+++++ + +|+++.
T Consensus 70 v~~~Pt~~~~-~---~g~~~~ 86 (109)
T 2yzu_A 70 VMSIPTVILF-K---DGQPVE 86 (109)
T ss_dssp CCSSSEEEEE-E---TTEEEE
T ss_pred CCcCCEEEEE-e---CCcEee
Confidence 9999999999 5 897764
No 380
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.83 E-value=1.6e-12 Score=103.37 Aligned_cols=72 Identities=25% Similarity=0.520 Sum_probs=61.6
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|.||++||++|+.+.|.+.++.+++.++ +.++.|++|.+ ..
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~-----------------------~~ 64 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK----------VKVVKVNVDEN-----------------------PN 64 (106)
Confidence 4689999999999999999999999999888643 67777777643 56
Q ss_pred HHHhcCcCccceEEEECCCCcEEecc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
+++.|++.++|+++++ ++|+++.+.
T Consensus 65 ~~~~~~v~~~Pt~~~~-~~g~~~~~~ 89 (106)
T 2yj7_A 65 TAAQYGIRSIPTLLLF-KNGQVVDRL 89 (106)
Confidence 8889999999999999 899988764
No 381
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.19 E-value=6.9e-11 Score=121.15 Aligned_cols=97 Identities=15% Similarity=0.328 Sum_probs=76.2
Q ss_pred CcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHH
Q 014225 226 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 305 (428)
Q Consensus 226 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 305 (428)
+++++|+|||+||++|+++.|.|.++++++++. ..++.++.|+++.+. ..++
T Consensus 30 ~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~-------~~~v~~~~VD~d~d~---------------------~~~l 81 (519)
T 3t58_A 30 SSAWAVEFFASWCGHAIAFAPTWKELANDVKDW-------RPALNLAVLDCAEET---------------------NSAV 81 (519)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGG-------TTTEEEEEEETTSGG---------------------GHHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCc-------CCcEEEEEEECCccc---------------------cHHH
Confidence 589999999999999999999999999999863 236899999987432 3789
Q ss_pred HHhcCcCccceEEEECC---CCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 306 TKYFDVQGIPCLVIIGP---EGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 306 ~~~~~v~~~P~~~lid~---~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
++.|+|.++||++++++ +|+.+.... | ....++|.+.|.+.+...
T Consensus 82 ~~~~~V~~~PTl~~f~~g~~~G~~~~~~~-------g-------~~~~~~L~~~l~~~l~~~ 129 (519)
T 3t58_A 82 CREFNIAGFPTVRFFQAFTKNGSGATLPG-------A-------GANVQTLRMRLIDALESH 129 (519)
T ss_dssp HHHTTCCSBSEEEEECTTCCSCCCEEECC-------S-------SCCHHHHHHHHHHHHTTC
T ss_pred HHHcCCcccCEEEEEcCcccCCCceeEec-------C-------CCCHHHHHHHHHHHHhhc
Confidence 99999999999999987 665444321 1 112467778888877643
No 382
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.19 E-value=6.7e-12 Score=101.99 Aligned_cols=96 Identities=13% Similarity=0.109 Sum_probs=65.4
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
+...+||+|||+||++|+.+.+.+...++..... ..+.++.|.++.+. ...
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~--------~~~~l~~vdv~~~~---------------------~~~ 67 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEG--------RAAPVQRLQMRDPL---------------------PPG 67 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHH--------HHSCEEEEETTSCC---------------------CTT
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhc--------ccceEEEEECCCCC---------------------chh
Confidence 4468999999999999999987655443321110 13678888888652 146
Q ss_pred HHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
++..|+|.++||+++++ +|+.+.+. .|.. .. +.+.+.|++++...
T Consensus 68 la~~~~V~g~PT~i~f~-~G~ev~Ri-------~G~~----~~---~~f~~~L~~~l~~~ 112 (116)
T 3dml_A 68 LELARPVTFTPTFVLMA-GDVESGRL-------EGYP----GE---DFFWPMLARLIGQA 112 (116)
T ss_dssp CBCSSCCCSSSEEEEEE-TTEEEEEE-------ECCC----CH---HHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCEEEEEE-CCEEEeee-------cCCC----CH---HHHHHHHHHHHhhc
Confidence 77889999999999997 99999873 3322 22 45566666666543
No 383
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.19 E-value=2.1e-12 Score=107.14 Aligned_cols=91 Identities=23% Similarity=0.405 Sum_probs=70.8
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchh
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 303 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 303 (428)
..+++++|+||++||++|+.+.|.|.++.++++ ++.++.|++|.+ .
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~v~~~~v~~~~~-----------------------~ 79 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-----------GAVFLKVDVDEL-----------------------K 79 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-----------TBCCEECCTTTS-----------------------G
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-----------CCEEEEEeccch-----------------------H
Confidence 358899999999999999999999999988874 467888877644 5
Q ss_pred HHHHhcCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 304 ELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 304 ~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
.+++.|+|.++|+++++ ++|+++.+..+ . + .++|.+.|+++++..
T Consensus 80 ~~~~~~~v~~~Pt~~~~-~~g~~~~~~~g-------~-----~---~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 80 EVAEKYNVEAMPTFLFI-KDGAEADKVVG-------A-----R---KDDLQNTIVKHVGAT 124 (130)
T ss_dssp GGHHHHTCCSSCCCCBC-TTTTCCBCCCT-------T-----C---TTTHHHHHHHHTSSS
T ss_pred HHHHHcCCCccceEEEE-eCCeEEEEEeC-------C-----C---HHHHHHHHHHHHhcc
Confidence 78899999999998887 89998776432 1 1 145667777666543
No 384
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.19 E-value=2.9e-11 Score=98.93 Aligned_cols=83 Identities=11% Similarity=0.150 Sum_probs=62.3
Q ss_pred cccCCCCEEeccc-CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCC--CcEEEEEEecCCChHHHHHHHhcCCCce
Q 014225 46 LLNQHGTQVKVSD-LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNG--SDFEVVFVSSDEDLNAFNNYRACMPWLA 122 (428)
Q Consensus 46 l~~~~G~~v~l~~-~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~--~~~~ii~vs~D~~~~~~~~~~~~~~~~~ 122 (428)
+.+.+++.+.... .++++++|+||++||++|+.+.|.|.++++++++.+ .++.++.|+.+...
T Consensus 9 v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-------------- 74 (121)
T 2djj_A 9 VTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-------------- 74 (121)
T ss_dssp SEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC--------------
T ss_pred eEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc--------------
Confidence 4455666555442 468999999999999999999999999999998621 13777777665431
Q ss_pred eccCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCc
Q 014225 123 VPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDA 158 (428)
Q Consensus 123 ~~~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i 158 (428)
+++ ++.++|+++++++ +|++
T Consensus 75 -----------~~~--~v~~~Pt~~~~~~---~~~~ 94 (121)
T 2djj_A 75 -----------VPD--EIQGFPTIKLYPA---GAKG 94 (121)
T ss_dssp -----------CSS--CCSSSSEEEEECS---SCTT
T ss_pred -----------ccc--ccCcCCeEEEEeC---cCCC
Confidence 122 8999999999997 6663
No 385
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.19 E-value=3.7e-11 Score=98.53 Aligned_cols=70 Identities=24% Similarity=0.494 Sum_probs=59.4
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++|+++|+||++||++|+.+.|.|+++++++++ +.++.|++|.. ..+++.|+
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~------------------------~~~~~~~~ 84 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN----AVFLKVDVDEL------------------------KPIAEQFS 84 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----cEEEEEECCCC------------------------HHHHHHcC
Confidence 589999999999999999999999999998753 77888777653 67888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++.+
T Consensus 85 v~~~Pt~~~~-~---~G~~~~~ 102 (122)
T 2vlu_A 85 VEAMPTFLFM-K---EGDVKDR 102 (122)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-e---CCEEEEE
Confidence 9999998877 5 8977643
No 386
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.19 E-value=3.4e-11 Score=103.33 Aligned_cols=70 Identities=17% Similarity=0.436 Sum_probs=60.1
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++|+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.. ..+++.|+
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~~~~------------------------~~l~~~~~ 82 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP----QVSFVKLEAEGV------------------------PEVSEKYE 82 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTS------------------------HHHHHHTT
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC----CeEEEEEECCCC------------------------HHHHHHcC
Confidence 48999999999999999999999999999973 278888877643 57888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|++++++ +|+++.+
T Consensus 83 v~~~Pt~~~~~----~G~~~~~ 100 (153)
T 2wz9_A 83 ISSVPTFLFFK----NSQKIDR 100 (153)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CCCCCEEEEEE----CCEEEEE
Confidence 99999999999 6877643
No 387
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.18 E-value=4.2e-11 Score=94.94 Aligned_cols=71 Identities=20% Similarity=0.438 Sum_probs=59.9
Q ss_pred CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhc
Q 014225 59 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 138 (428)
Q Consensus 59 ~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 138 (428)
.+||+++|.||++||++|+.+.|.+++++++++ + +.++.|+.|.. ..+++.|
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~--~~~~~v~~~~~------------------------~~~~~~~ 68 (104)
T 2vim_A 17 NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--E--VEFAKVDVDQN------------------------EEAAAKY 68 (104)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--T--SEEEEEETTTC------------------------HHHHHHT
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--C--CEEEEEeccCC------------------------HHHHHHc
Confidence 468999999999999999999999999999875 3 78888877643 5788899
Q ss_pred CCCCCceEEEEcCCCCCCCcccc
Q 014225 139 DIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 139 ~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++.++|++++++ +|+++.+
T Consensus 69 ~v~~~Pt~~~~~----~g~~~~~ 87 (104)
T 2vim_A 69 SVTAMPTFVFIK----DGKEVDR 87 (104)
T ss_dssp TCCSSSEEEEEE----TTEEEEE
T ss_pred CCccccEEEEEe----CCcEEEE
Confidence 999999988886 7877643
No 388
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.18 E-value=1.5e-10 Score=113.41 Aligned_cols=94 Identities=15% Similarity=0.209 Sum_probs=67.6
Q ss_pred cEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHH
Q 014225 227 KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELT 306 (428)
Q Consensus 227 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 306 (428)
++++|.|+++||++|.++.|.|.+++++|+++ +.++.|+++... ...++
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~----------i~f~~vd~~~~~---------------------~~~~~ 184 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK----------ILFIFIDSDHTD---------------------NQRIL 184 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT----------CEEEEECTTSGG---------------------GHHHH
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc----------eEEEEecCChHH---------------------HHHHH
Confidence 57889999999999999999999999999865 677777766321 37789
Q ss_pred HhcCcCc--cceEEEECCCCcE-EeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 307 KYFDVQG--IPCLVIIGPEGKT-VTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 307 ~~~~v~~--~P~~~lid~~G~i-~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
+.|||.+ +|++++++.++.. .+.. ...+++ .+.|.+.++..+.+.
T Consensus 185 ~~fgi~~~~~P~~~~~~~~~~~~ky~~----------~~~~~~---~~~l~~fi~~~l~g~ 232 (361)
T 3uem_A 185 EFFGLKKEECPAVRLITLEEEMTKYKP----------ESEELT---AERITEFCHRFLEGK 232 (361)
T ss_dssp HHTTCCTTTCSEEEEEECC--CCEECC----------SSCCCC---HHHHHHHHHHHHTTC
T ss_pred HHcCCCccCCccEEEEEcCCcccccCC----------CccccC---HHHHHHHHHHHhcCC
Confidence 9999988 9999999764432 2220 001233 356677777777643
No 389
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.18 E-value=4e-11 Score=98.70 Aligned_cols=72 Identities=17% Similarity=0.337 Sum_probs=58.8
Q ss_pred CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhc
Q 014225 59 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 138 (428)
Q Consensus 59 ~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 138 (428)
.+||+++|+||++||++|+.+.|.++++++++++ +.++.|+.+.. . ..+++.|
T Consensus 35 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~---------------------~--~~~~~~~ 87 (124)
T 1faa_A 35 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD----VIFLKLDCNQE---------------------N--KTLAKEL 87 (124)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSST---------------------T--HHHHHHH
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC----CEEEEEecCcc---------------------h--HHHHHHc
Confidence 4689999999999999999999999999998863 77777766521 0 6788999
Q ss_pred CCCCCceEEEEcCCCCCCCcccc
Q 014225 139 DIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 139 ~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++.++|+++++ + +|+++.+
T Consensus 88 ~v~~~Pt~~~~-~---~G~~~~~ 106 (124)
T 1faa_A 88 GIRVVPTFKIL-K---ENSVVGE 106 (124)
T ss_dssp CCSSSSEEEEE-E---TTEEEEE
T ss_pred CCCeeeEEEEE-e---CCcEEEE
Confidence 99999996665 5 8977644
No 390
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.18 E-value=2.2e-11 Score=111.22 Aligned_cols=69 Identities=20% Similarity=0.382 Sum_probs=56.2
Q ss_pred cCCcEEEEEEecc-CChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcch
Q 014225 224 LVGKTVGLYFSAR-WCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 302 (428)
Q Consensus 224 ~~gk~vll~F~a~-wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 302 (428)
..+++++++||++ ||++|+.+.|.|.++.+. . +++.++.|+++... .
T Consensus 20 ~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~----------~~v~~~~vd~~~~~---------------------~ 67 (226)
T 1a8l_A 20 MVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T----------DKLSYEIVDFDTPE---------------------G 67 (226)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C----------TTEEEEEEETTSHH---------------------H
T ss_pred cCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C----------CceEEEEEeCCCcc---------------------c
Confidence 4567789999999 999999999999998753 2 25889999888411 2
Q ss_pred hHHHHhcCcCccceEEEECCCCc
Q 014225 303 KELTKYFDVQGIPCLVIIGPEGK 325 (428)
Q Consensus 303 ~~~~~~~~v~~~P~~~lid~~G~ 325 (428)
.++++.|+|.++||++++ ++|+
T Consensus 68 ~~~~~~~~v~~~Pt~~~~-~~g~ 89 (226)
T 1a8l_A 68 KELAKRYRIDRAPATTIT-QDGK 89 (226)
T ss_dssp HHHHHHTTCCSSSEEEEE-ETTB
T ss_pred HHHHHHcCCCcCceEEEE-cCCc
Confidence 678999999999999999 6664
No 391
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.18 E-value=3e-11 Score=97.51 Aligned_cols=70 Identities=20% Similarity=0.312 Sum_probs=58.9
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++++++|+||++||++|+.+.|.|.+++++++ ++.++.|+.|.. ..+++.|+
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~------------------------~~l~~~~~ 69 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP----QVAISSVDSEAR------------------------PELMKELG 69 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT----TSCEEEEEGGGC------------------------HHHHHHTT
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC----CcEEEEEcCcCC------------------------HHHHHHcC
Confidence 56899999999999999999999999988864 267777766543 67888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++.+
T Consensus 70 v~~~Pt~~~~-~---~G~~v~~ 87 (110)
T 2l6c_A 70 FERVPTLVFI-R---DGKVAKV 87 (110)
T ss_dssp CCSSCEEEEE-E---SSSEEEE
T ss_pred CcccCEEEEE-E---CCEEEEE
Confidence 9999999999 5 8987654
No 392
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.17 E-value=2.1e-11 Score=96.42 Aligned_cols=69 Identities=14% Similarity=0.405 Sum_probs=59.4
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++++++|.||++||++|+.+.|.+.++++++++ +.++.|+.|.+ ..+++.|+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~v~~~~~------------------------~~~~~~~~ 66 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ----VGFGKLNSDEN------------------------PDIAARYG 66 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC----ceEEEEECCCC------------------------HHHHHhCC
Confidence 578999999999999999999999999998754 77888777644 57888999
Q ss_pred CCCCceEEEEcCCCCCCCccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATL 160 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~ 160 (428)
+.++|+++++ + +|+++.
T Consensus 67 v~~~Pt~~~~-~---~g~~~~ 83 (104)
T 2e0q_A 67 VMSLPTVIFF-K---DGEPVD 83 (104)
T ss_dssp CCSSCEEEEE-E---TTEEEE
T ss_pred ccccCEEEEE-E---CCeEhh
Confidence 9999999999 5 897764
No 393
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.17 E-value=6.3e-11 Score=96.81 Aligned_cols=71 Identities=23% Similarity=0.436 Sum_probs=60.6
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++++|.||++||++|+.+.|.+.++++++++. +.++.|++|.. ..+++.|+
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~------------------------~~~~~~~~ 81 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATD---LTVAKLDVDTN------------------------PETARNFQ 81 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEECCCC------------------------HHHHHhcC
Confidence 4789999999999999999999999999998753 88888877644 57888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++. +|+++.+
T Consensus 82 i~~~Pt~~~~~----~g~~~~~ 99 (121)
T 2i1u_A 82 VVSIPTLILFK----DGQPVKR 99 (121)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CCcCCEEEEEE----CCEEEEE
Confidence 99999998885 7877643
No 394
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.17 E-value=2e-11 Score=100.30 Aligned_cols=72 Identities=19% Similarity=0.361 Sum_probs=61.6
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++|+++|+||++||++|+.+.|.|+++++++++.+ +.++.|++|.. ..+++.|+
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~--v~~~~vd~d~~------------------------~~~~~~~~ 85 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDK--VGFYKVDVDEQ------------------------SQIAQEVG 85 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHH--SEEEEEETTTC------------------------HHHHHHHT
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCc--EEEEEEECcCC------------------------HHHHHHcC
Confidence 57899999999999999999999999999987754 78888877653 57888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|++++++ +|+++.+
T Consensus 86 v~~~Pt~~~~~----~G~~~~~ 103 (121)
T 2j23_A 86 IRAMPTFVFFK----NGQKIDT 103 (121)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CCcccEEEEEE----CCeEEee
Confidence 99999999885 7877644
No 395
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.16 E-value=8.3e-11 Score=99.12 Aligned_cols=84 Identities=19% Similarity=0.391 Sum_probs=59.4
Q ss_pred cccCCCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceecc
Q 014225 46 LLNQHGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPY 125 (428)
Q Consensus 46 l~~~~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~ 125 (428)
+...+++.+.....+++.++|+||++||++|+.+.|.|.+++++++++ +.++.|++|..
T Consensus 35 v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~------------------ 93 (140)
T 1v98_A 35 VVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR---LKVVKVNVDEH------------------ 93 (140)
T ss_dssp --------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTC------------------
T ss_pred cccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc---eEEEEEECCCC------------------
Confidence 445566555544334444999999999999999999999999998753 88888877654
Q ss_pred CChHHHHHHHhhcCCCCCceEEEEcCCCCCCCccc
Q 014225 126 SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATL 160 (428)
Q Consensus 126 ~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~ 160 (428)
..+++.|++.++|+++++. +|+++.
T Consensus 94 ------~~l~~~~~v~~~Pt~~~~~----~G~~~~ 118 (140)
T 1v98_A 94 ------PGLAARYGVRSVPTLVLFR----RGAPVA 118 (140)
T ss_dssp ------HHHHHHTTCCSSSEEEEEE----TTEEEE
T ss_pred ------HHHHHHCCCCccCEEEEEe----CCcEEE
Confidence 5788899999999999994 897764
No 396
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.16 E-value=7e-11 Score=95.48 Aligned_cols=70 Identities=17% Similarity=0.332 Sum_probs=58.9
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
+||+++|+||++||++|+.+.|.+.+++++++ + +.++.|++|.. ..+++.|+
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~--v~~~~vd~~~~------------------------~~~~~~~~ 76 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--K--MVFIKVDVDEV------------------------SEVTEKEN 76 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--T--SEEEEEETTTT------------------------HHHHHHTT
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--C--CEEEEEECCCC------------------------HHHHHHcC
Confidence 58999999999999999999999999999875 2 77888876543 57888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++. +|+++.+
T Consensus 77 v~~~Pt~~~~~----~G~~~~~ 94 (112)
T 1syr_A 77 ITSMPTFKVYK----NGSSVDT 94 (112)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CCcccEEEEEE----CCcEEEE
Confidence 99999987775 7877543
No 397
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.16 E-value=7.4e-11 Score=94.64 Aligned_cols=74 Identities=12% Similarity=0.150 Sum_probs=62.5
Q ss_pred CcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHH
Q 014225 226 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 305 (428)
Q Consensus 226 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 305 (428)
+++++|+|+|+|||+|+...|.++++.+. . ++.++.|.+|... +...++
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~--~----------~v~~~~vdVde~r-------------------~~Sn~I 72 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE--R----------DMDGYYLIVQQER-------------------DLSDYI 72 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH--H----------TCCEEEEEGGGGH-------------------HHHHHH
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc--C----------CceEEEEEeecCc-------------------hhhHHH
Confidence 68999999999999999999999998874 2 4789999988552 112568
Q ss_pred HHhcCcC-ccceEEEECCCCcEEeccc
Q 014225 306 TKYFDVQ-GIPCLVIIGPEGKTVTKQG 331 (428)
Q Consensus 306 ~~~~~v~-~~P~~~lid~~G~i~~~~~ 331 (428)
+..|||+ ..|+++++ ++|+++.+..
T Consensus 73 A~~~~V~h~sPq~il~-k~G~~v~~~S 98 (112)
T 3iv4_A 73 AKKTNVKHESPQAFYF-VNGEMVWNRD 98 (112)
T ss_dssp HHHHTCCCCSSEEEEE-ETTEEEEEEE
T ss_pred HHHhCCccCCCeEEEE-ECCEEEEEee
Confidence 9999999 59999999 9999998753
No 398
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.16 E-value=7e-11 Score=95.22 Aligned_cols=71 Identities=21% Similarity=0.484 Sum_probs=60.5
Q ss_pred CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhc
Q 014225 59 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 138 (428)
Q Consensus 59 ~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 138 (428)
.+|++++|+||++||++|+.+.|.|++++++++ + +.++.|+.|.. ..+++.|
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~--v~~~~v~~~~~------------------------~~~~~~~ 75 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--N--VTFLKVDVDEL------------------------KAVAEEW 75 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--S--EEEEEEETTTC------------------------HHHHHHH
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--C--cEEEEEEcccc------------------------HHHHHhC
Confidence 358999999999999999999999999999875 2 88888877644 5788899
Q ss_pred CCCCCceEEEEcCCCCCCCcccc
Q 014225 139 DIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 139 ~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++.++|+++++. +|+++.+
T Consensus 76 ~v~~~Pt~~~~~----~G~~~~~ 94 (113)
T 1ti3_A 76 NVEAMPTFIFLK----DGKLVDK 94 (113)
T ss_dssp HCSSTTEEEEEE----TTEEEEE
T ss_pred CCCcccEEEEEe----CCEEEEE
Confidence 999999999984 7977654
No 399
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.15 E-value=3.4e-11 Score=111.39 Aligned_cols=72 Identities=10% Similarity=0.125 Sum_probs=60.2
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
+|++|||.||++||++|+.+.|.|.+++++|. ++.|+.|+++. ..
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-----------~v~f~kVd~d~------------------------~~ 176 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP-----------MVKFCKIKASN------------------------TG 176 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-----------TSEEEEEEHHH------------------------HC
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-----------CCEEEEEeCCc------------------------HH
Confidence 47999999999999999999999999998875 46788887652 23
Q ss_pred HHHhcCcCccceEEEECCCCcEEecccc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~ 332 (428)
++..|+|.++||++++ ++|+++.+..+
T Consensus 177 l~~~~~I~~~PTll~~-~~G~~v~~~vG 203 (245)
T 1a0r_P 177 AGDRFSSDVLPTLLVY-KGGELLSNFIS 203 (245)
T ss_dssp CTTSSCTTTCSEEEEE-ETTEEEEEETT
T ss_pred HHHHCCCCCCCEEEEE-ECCEEEEEEeC
Confidence 5678999999999999 69999877543
No 400
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.15 E-value=7.4e-11 Score=112.76 Aligned_cols=69 Identities=28% Similarity=0.485 Sum_probs=60.0
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|+|||+||++|+.+.|.|.++++++.+. +.++.|++|.+. ...
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~----------~~~~~v~~d~~~---------------------~~~ 82 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV----------VQVAAVNCDLNK---------------------NKA 82 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT----------SEEEEEETTSTT---------------------THH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC----------cEEEEEEccCcc---------------------CHH
Confidence 4689999999999999999999999999998654 789999998542 378
Q ss_pred HHHhcCcCccceEEEECCCCc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGK 325 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~ 325 (428)
+++.|+|.++||+++++. |+
T Consensus 83 l~~~~~I~~~Pt~~~~~~-g~ 102 (298)
T 3ed3_A 83 LCAKYDVNGFPTLMVFRP-PK 102 (298)
T ss_dssp HHHHTTCCBSSEEEEEEC-CC
T ss_pred HHHhCCCCccceEEEEEC-Cc
Confidence 999999999999999954 54
No 401
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.15 E-value=9.1e-12 Score=101.39 Aligned_cols=72 Identities=19% Similarity=0.431 Sum_probs=58.7
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++|+++|.||++||++|+.+.|.+.++++++++.+.++.++.|+.+.. ..+++.|+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~------------------------~~~~~~~~ 78 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE------------------------SDLAQQYG 78 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC------------------------CSSHHHHT
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC------------------------HHHHHHCC
Confidence 579999999999999999999999999999987654466666655432 35677899
Q ss_pred CCCCceEEEEcCCCCCCCcc
Q 014225 140 IEGIPCLVVLQPYDDKDDAT 159 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~ 159 (428)
+.++|+++++. +|+.+
T Consensus 79 v~~~Pt~~~~~----~g~~~ 94 (120)
T 1mek_A 79 VRGYPTIKFFR----NGDTA 94 (120)
T ss_dssp CCSSSEEEEEE----SSCSS
T ss_pred CCcccEEEEEe----CCCcC
Confidence 99999999995 67654
No 402
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.15 E-value=4e-11 Score=109.59 Aligned_cols=71 Identities=21% Similarity=0.477 Sum_probs=61.1
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++|+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.. ..+++.|+
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~------------------------~~l~~~~~ 81 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQN------------------------PGTAPKYG 81 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC------------------------TTTGGGGT
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---cEEEEEECCCC------------------------HHHHHHcC
Confidence 5799999999999999999999999999999865 88888877654 45678899
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|++++++ +|+++.+
T Consensus 82 v~~~Pt~~~~~----~G~~~~~ 99 (222)
T 3dxb_A 82 IRGIPTLLLFK----NGEVAAT 99 (222)
T ss_dssp CCSBSEEEEEE----TTEEEEE
T ss_pred CCcCCEEEEEE----CCeEEEE
Confidence 99999999996 7877643
No 403
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.13 E-value=8.9e-11 Score=95.40 Aligned_cols=70 Identities=21% Similarity=0.475 Sum_probs=59.4
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.||+++|+||++||++|+.+.|.|++++++++ + +.++.|+.|.. ..+++.|+
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~--~~~~~v~~~~~------------------------~~~~~~~~ 78 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--G--AIFLKVDVDEL------------------------KDVAEAYN 78 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--T--SEEEEEETTTS------------------------HHHHHHTT
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--C--cEEEEEEcccC------------------------HHHHHHcC
Confidence 48999999999999999999999999999986 3 77888776543 67888999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|+++++ + +|+++.+
T Consensus 79 v~~~Pt~~~~-~---~g~~~~~ 96 (118)
T 2vm1_A 79 VEAMPTFLFI-K---DGEKVDS 96 (118)
T ss_dssp CCSBSEEEEE-E---TTEEEEE
T ss_pred CCcCcEEEEE-e---CCeEEEE
Confidence 9999999888 4 8877643
No 404
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.12 E-value=4.1e-11 Score=102.60 Aligned_cols=74 Identities=11% Similarity=0.090 Sum_probs=54.2
Q ss_pred cCCCCEEEEEEecCCChhhhhhHHHHHHHH--HHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHH
Q 014225 58 DLEGKVTALYFSANWYPPCGNFTGVLVDVY--EELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALN 135 (428)
Q Consensus 58 ~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~--~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~ 135 (428)
...||+|+|+|||+||++|+.+.|.+.+.. .++.+. .++.|++|.+. ..+.
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~----~fv~V~vD~e~-----------------------~~~~ 93 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQN----KFIMLNLMHET-----------------------TDKN 93 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHH----TCEEEEESSCC-----------------------SCGG
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhc----CeEEEEecCCc-----------------------hhhH
Confidence 346899999999999999999999988642 222221 25556665321 1124
Q ss_pred hhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 136 RKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 136 ~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..|++.++|+++|+++ +|+++.+
T Consensus 94 ~~~~v~~~PT~~f~~~---~G~~v~~ 116 (151)
T 3ph9_A 94 LSPDGQYVPRIMFVDP---SLTVRAD 116 (151)
T ss_dssp GCTTCCCSSEEEEECT---TSCBCTT
T ss_pred hhcCCCCCCEEEEECC---CCCEEEE
Confidence 5688999999999999 9988865
No 405
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.11 E-value=9.6e-11 Score=107.25 Aligned_cols=68 Identities=18% Similarity=0.294 Sum_probs=54.2
Q ss_pred CcEEEEEE----eccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcc
Q 014225 226 GKTVGLYF----SARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 301 (428)
Q Consensus 226 gk~vll~F----~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~ 301 (428)
+.++++.| |++||++|+.++|.+.++++++.+. +.+.++.|+++.+
T Consensus 21 ~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~--------~~v~~~~vd~~~~---------------------- 70 (229)
T 2ywm_A 21 EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQ--------DKIKLDIYSPFTH---------------------- 70 (229)
T ss_dssp SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCT--------TTEEEEEECTTTC----------------------
T ss_pred CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCC--------CceEEEEecCccc----------------------
Confidence 44555555 5899999999999999998888432 2588888887755
Q ss_pred hhHHHHhcCcCccceEEEECCCCc
Q 014225 302 IKELTKYFDVQGIPCLVIIGPEGK 325 (428)
Q Consensus 302 ~~~~~~~~~v~~~P~~~lid~~G~ 325 (428)
.++++.|+|+++||+++++ +|+
T Consensus 71 -~~l~~~~~v~~~Ptl~~~~-~~~ 92 (229)
T 2ywm_A 71 -KEETEKYGVDRVPTIVIEG-DKD 92 (229)
T ss_dssp -HHHHHHTTCCBSSEEEEES-SSC
T ss_pred -HHHHHHcCCCcCcEEEEEC-CCc
Confidence 7899999999999999995 443
No 406
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.11 E-value=3.7e-11 Score=99.23 Aligned_cols=71 Identities=21% Similarity=0.467 Sum_probs=55.9
Q ss_pred CCCEEEEEEecCCCh--------------hhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceecc
Q 014225 60 EGKVTALYFSANWYP--------------PCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPY 125 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~--------------~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~ 125 (428)
+||+++|+||++||+ +|+.+.|.+.+++++++++ +.++.|++|..
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~---~~~~~vd~d~~------------------ 78 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK---LTVAKLNIDQN------------------ 78 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----------CEEEEEETTSC------------------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC---eEEEEEECCCC------------------
Confidence 589999999999999 9999999999999998764 88888877654
Q ss_pred CChHHHHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 126 SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 126 ~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..+++.|++.++|+++++ + +|+++.+
T Consensus 79 ------~~l~~~~~v~~~Pt~~~~-~---~G~~~~~ 104 (123)
T 1oaz_A 79 ------PGTAPKYGIRGIPTLLLF-K---NGEVAAT 104 (123)
T ss_dssp ------TTTGGGGTCCBSSEEEEE-E---SSSEEEE
T ss_pred ------HHHHHHcCCCccCEEEEE-E---CCEEEEE
Confidence 457788999999999999 6 8987643
No 407
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.11 E-value=1.4e-10 Score=101.30 Aligned_cols=86 Identities=15% Similarity=0.123 Sum_probs=60.6
Q ss_pred EecccCCCCEEEEEEecCCChhhhhhHHH---HHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHH
Q 014225 54 VKVSDLEGKVTALYFSANWYPPCGNFTGV---LVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLET 130 (428)
Q Consensus 54 v~l~~~~gk~vlv~F~a~wC~~C~~~~p~---l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~ 130 (428)
+.....+||+|+|+|||+||++|+.+.|. ..++.+.+.++ +.++.|+.|...+....|+
T Consensus 32 ~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~---fv~ikVD~de~~~l~~~y~--------------- 93 (173)
T 3ira_A 32 FEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA---FVSIKVDREERPDIDNIYM--------------- 93 (173)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH---CEEEEEETTTCHHHHHHHH---------------
T ss_pred HHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc---CceeeeCCcccCcHHHHHH---------------
Confidence 44445579999999999999999998883 24566666553 7777776665544222222
Q ss_pred HHHHHhhcCCCCCceEEEEcCCCCCCCcccc
Q 014225 131 KKALNRKFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 131 ~~~l~~~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
..+...+++.++|+++|+++ +|+++..
T Consensus 94 -~~~q~~~gv~g~Pt~v~l~~---dG~~v~~ 120 (173)
T 3ira_A 94 -TVCQIILGRGGWPLNIIMTP---GKKPFFA 120 (173)
T ss_dssp -HHHHHHHSCCCSSEEEEECT---TSCEEEE
T ss_pred -HHHHHHcCCCCCcceeeECC---CCCceee
Confidence 11222359999999999999 9998764
No 408
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.10 E-value=8.8e-11 Score=96.84 Aligned_cols=73 Identities=16% Similarity=0.428 Sum_probs=58.3
Q ss_pred CCCCEEEEEEecC-------CChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHH
Q 014225 59 LEGKVTALYFSAN-------WYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETK 131 (428)
Q Consensus 59 ~~gk~vlv~F~a~-------wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~ 131 (428)
.+||+++|+|||+ ||++|+.+.|.|.++++++++. +.++.|+++.... + . +..
T Consensus 22 ~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~---~~~~~vd~~~~~~-~----~----------d~~-- 81 (123)
T 1wou_A 22 HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG---CVFIYCQVGEKPY-W----K----------DPN-- 81 (123)
T ss_dssp TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTT---EEEEEEECCCHHH-H----H----------CTT--
T ss_pred hCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCC---cEEEEEECCCchh-h----h----------chh--
Confidence 3589999999999 9999999999999999888653 8888888764321 0 0 111
Q ss_pred HHHHhhcCCCCCceEEEEcC
Q 014225 132 KALNRKFDIEGIPCLVVLQP 151 (428)
Q Consensus 132 ~~l~~~~~v~~~P~~~lid~ 151 (428)
..+++.|++.++|+++++++
T Consensus 82 ~~~~~~~~i~~~Pt~~~~~~ 101 (123)
T 1wou_A 82 NDFRKNLKVTAVPTLLKYGT 101 (123)
T ss_dssp CHHHHHHCCCSSSEEEETTS
T ss_pred HHHHHHCCCCeeCEEEEEcC
Confidence 56788899999999999996
No 409
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.10 E-value=3.3e-10 Score=99.16 Aligned_cols=71 Identities=21% Similarity=0.299 Sum_probs=59.0
Q ss_pred CCcEEEEEEec-------cCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCcccccc
Q 014225 225 VGKTVGLYFSA-------RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 297 (428)
Q Consensus 225 ~gk~vll~F~a-------~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~ 297 (428)
++.+|||+||| +||++|+.+.|.|++++++|... . ...++.++.|++|.+
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~---~--~~~~v~f~kvD~d~~------------------ 92 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQ---A--PQSLNLFFTVDVNEV------------------ 92 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHH---C--TTCCEEEEEEETTTC------------------
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhc---c--CCCCEEEEEEECccC------------------
Confidence 35689999999 49999999999999999999732 0 013588888888866
Q ss_pred CCcchhHHHHhcCcCccceEEEECCCC
Q 014225 298 GDPTIKELTKYFDVQGIPCLVIIGPEG 324 (428)
Q Consensus 298 ~~d~~~~~~~~~~v~~~P~~~lid~~G 324 (428)
.+++..|||+++||++++ ++|
T Consensus 93 -----~~la~~~~I~siPtl~~F-~~g 113 (178)
T 3ga4_A 93 -----PQLVKDLKLQNVPHLVVY-PPA 113 (178)
T ss_dssp -----HHHHHHTTCCSSCEEEEE-CCC
T ss_pred -----HHHHHHcCCCCCCEEEEE-cCC
Confidence 789999999999999999 555
No 410
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.10 E-value=1.4e-10 Score=97.43 Aligned_cols=67 Identities=9% Similarity=0.107 Sum_probs=55.4
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
+||+|+|+|||+||++|+.+.|.|.++++++. ++.++.|++|... +.|+
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~----~v~~~~vd~~~~~---------------------------~~~~ 77 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP----ETKFVKAIVNSCI---------------------------EHYH 77 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS----SEEEEEECCSSSC---------------------------SSCC
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CcEEEEEEhhcCc---------------------------ccCC
Confidence 46899999999999999999999999999873 2777777665430 4699
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|++++++ +|+++.+
T Consensus 78 i~~~Pt~~~~~----~G~~v~~ 95 (135)
T 2dbc_A 78 DNCLPTIFVYK----NGQIEGK 95 (135)
T ss_dssp SSCCSEEEEES----SSSCSEE
T ss_pred CCCCCEEEEEE----CCEEEEE
Confidence 99999999997 7887754
No 411
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.09 E-value=5.1e-11 Score=108.48 Aligned_cols=72 Identities=10% Similarity=0.126 Sum_probs=60.9
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
+|++|||.||++||++|+.+.|.|.+++++|. ++.++.|+++ + ..
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-----------~v~f~~vd~~-~-----------------------~~ 163 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-----------MVKFCKIRAS-N-----------------------TG 163 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-----------TSEEEEEEHH-H-----------------------HT
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-----------CeEEEEEECC-c-----------------------HH
Confidence 46899999999999999999999999988874 4788888876 2 45
Q ss_pred HHHhcCcCccceEEEECCCCcEEecccc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTKQGR 332 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~~~~ 332 (428)
++..|+|.++||++++ ++|+++.+..+
T Consensus 164 l~~~~~i~~~PTl~~~-~~G~~v~~~~G 190 (217)
T 2trc_P 164 AGDRFSSDVLPTLLVY-KGGELISNFIS 190 (217)
T ss_dssp CSTTSCGGGCSEEEEE-ETTEEEEEETT
T ss_pred HHHHCCCCCCCEEEEE-ECCEEEEEEeC
Confidence 6778999999999999 69998876443
No 412
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.09 E-value=2.8e-10 Score=85.18 Aligned_cols=62 Identities=11% Similarity=0.209 Sum_probs=52.1
Q ss_pred EEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHHHh
Q 014225 229 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY 308 (428)
Q Consensus 229 vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 308 (428)
..|.||++||++|+.+.|.+.++.+++.. ++.++.|+ + .++++.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~----------~~~~~~v~---~-----------------------~~~~~~ 45 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI----------DAEFEKIK---E-----------------------MDQILE 45 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC----------CEEEEEEC---S-----------------------HHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC----------ceEEEEec---C-----------------------HHHHHH
Confidence 35899999999999999999999888753 36776665 2 568889
Q ss_pred cCcCccceEEEECCCCcEEec
Q 014225 309 FDVQGIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 309 ~~v~~~P~~~lid~~G~i~~~ 329 (428)
|+|.++|++++ +|+++.+
T Consensus 46 ~~v~~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 46 AGLTALPGLAV---DGELKIM 63 (77)
T ss_dssp HTCSSSSCEEE---TTEEEEC
T ss_pred CCCCcCCEEEE---CCEEEEc
Confidence 99999999988 8998876
No 413
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.08 E-value=5.1e-10 Score=110.74 Aligned_cols=96 Identities=14% Similarity=0.267 Sum_probs=72.4
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|.|||+||++|+++.|.|.++++.+++.. + ...++.++.|+++.+ ..
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~---~-~~~~v~~~~Vd~~~~-----------------------~~ 73 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEF---P-NENQVVFARVDCDQH-----------------------SD 73 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC-------CCEEEEEEETTTC-----------------------HH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhc---C-CCCceEEEEEECCcc-----------------------HH
Confidence 47899999999999999999999999999986320 0 012488888888755 67
Q ss_pred HHHhcCcCccceEEEECCCCcEEec-cccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKTVTK-QGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i~~~-~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
+++.|+|.++||++++ ++|+++.+ +.+ +.+ .+.|.+.|.+.+.
T Consensus 74 l~~~~~v~~~Pt~~~f-~~G~~~~~~~~G-----------~~~---~~~l~~~i~~~~~ 117 (382)
T 2r2j_A 74 IAQRYRISKYPTLKLF-RNGMMMKREYRG-----------QRS---VKALADYIRQQKS 117 (382)
T ss_dssp HHHHTTCCEESEEEEE-ETTEEEEEECCS-----------CCS---HHHHHHHHHHHHS
T ss_pred HHHhcCCCcCCEEEEE-eCCcEeeeeecC-----------cch---HHHHHHHHHHhcc
Confidence 9999999999999998 78887753 211 112 3566777777664
No 414
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.08 E-value=3.8e-11 Score=100.76 Aligned_cols=77 Identities=18% Similarity=0.235 Sum_probs=59.5
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
++ +++|+|||+||++|+.+.|.|.+++++++ +.++.|+++..... ...+....+++.|+
T Consensus 31 ~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----v~~~~vd~~~~~~~---------------~~~d~~~~l~~~~~ 89 (135)
T 3emx_A 31 QG-DAILAVYSKTCPHCHRDWPQLIQASKEVD-----VPIVMFIWGSLIGE---------------RELSAARLEMNKAG 89 (135)
T ss_dssp TS-SEEEEEEETTCHHHHHHHHHHHHHHTTCC-----SCEEEEEECTTCCH---------------HHHHHHHHHHHHHT
T ss_pred CC-cEEEEEECCcCHhhhHhChhHHHHHHHCC-----CEEEEEECCCchhh---------------hhhhhhHHHHHHcC
Confidence 44 99999999999999999999999988874 56788777544321 01223378899999
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++|++++++ +|+++.+
T Consensus 90 v~~~Pt~~~~~----~G~~v~~ 107 (135)
T 3emx_A 90 VEGTPTLVFYK----EGRIVDK 107 (135)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CceeCeEEEEc----CCEEEEE
Confidence 99999888887 7877654
No 415
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.08 E-value=2.1e-11 Score=98.00 Aligned_cols=73 Identities=16% Similarity=0.330 Sum_probs=53.8
Q ss_pred eecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCcccccc
Q 014225 218 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 297 (428)
Q Consensus 218 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~ 297 (428)
.+.+++..||+++|+|||+|||+|+.+.|.|.++++++ ..|-+..|..
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~--------------~~v~~~~~~~------------------ 51 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV--------------PYVECSPNGP------------------ 51 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGS--------------CEEESCTTCT------------------
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhC--------------CEEEEecccc------------------
Confidence 46677778889999999999999999999998876433 2233332211
Q ss_pred CCcchhHHHHhcCcCccceEEEECCCCcE
Q 014225 298 GDPTIKELTKYFDVQGIPCLVIIGPEGKT 326 (428)
Q Consensus 298 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i 326 (428)
.+...++++.|+|.++||+++ +|++
T Consensus 52 -~~~~~~l~~~~~V~~~PT~~i---~G~~ 76 (106)
T 3kp8_A 52 -GTPQAQECTEAGITSYPTWII---NGRT 76 (106)
T ss_dssp -TSCCCHHHHHTTCCSSSEEEE---TTEE
T ss_pred -cchhHHHHHHcCCeEeCEEEE---CCEE
Confidence 012368999999999999776 7875
No 416
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.06 E-value=1.6e-10 Score=115.84 Aligned_cols=76 Identities=17% Similarity=0.238 Sum_probs=60.5
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+|+|||+|||+||++|+.+.|.+.+++++++... +++..+.+.++.|++|.+ .+
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~--g~~~~~~v~f~~VD~d~~-----------------------~~ 95 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEH--GKDALQIATAAAVNCASE-----------------------VD 95 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSS--CSSGGGGCEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhc--ccccCceEEEEEEECCCC-----------------------HH
Confidence 34899999999999999999999999999886320 000001488999998865 67
Q ss_pred HHHhcCcCccceEEEECCCCc
Q 014225 305 LTKYFDVQGIPCLVIIGPEGK 325 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~ 325 (428)
+++.|+|.++||+++++++|.
T Consensus 96 la~~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 96 LCRKYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp HHHHTTCCSSCEEEEEEESSC
T ss_pred HHHHcCCCccCeEEEEECCCc
Confidence 999999999999999976653
No 417
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.05 E-value=1.4e-10 Score=95.11 Aligned_cols=66 Identities=9% Similarity=0.076 Sum_probs=55.3
Q ss_pred CCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCC
Q 014225 61 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 140 (428)
Q Consensus 61 gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 140 (428)
+++|+|+|||+||++|+.+.|.|.++++++.+ +.++-|++|.. .+.|++
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~----v~f~kvd~d~~---------------------------~~~~~v 71 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE----TKFVKAIVNSC---------------------------IQHYHD 71 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT----SEEEEEEGGGT---------------------------STTCCG
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC----CEEEEEEhHHh---------------------------HHHCCC
Confidence 45999999999999999999999999999853 67777766531 356899
Q ss_pred CCCceEEEEcCCCCCCCcccc
Q 014225 141 EGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 141 ~~~P~~~lid~~~~dG~i~~~ 161 (428)
.++||++++. +|+.+.+
T Consensus 72 ~~~PT~~~fk----~G~~v~~ 88 (118)
T 3evi_A 72 NCLPTIFVYK----NGQIEAK 88 (118)
T ss_dssp GGCSEEEEEE----TTEEEEE
T ss_pred CCCCEEEEEE----CCEEEEE
Confidence 9999999998 7988765
No 418
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.04 E-value=4e-10 Score=90.38 Aligned_cols=78 Identities=9% Similarity=0.104 Sum_probs=63.2
Q ss_pred CCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCC
Q 014225 61 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 140 (428)
Q Consensus 61 gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 140 (428)
+++++|+|+|+||+||++..|.++++++. ++ +.++.|.+|...+ ....+++.|+|
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~---v~~~~vdVde~r~--------------------~Sn~IA~~~~V 78 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE--RD---MDGYYLIVQQERD--------------------LSDYIAKKTNV 78 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH--HT---CCEEEEEGGGGHH--------------------HHHHHHHHHTC
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc--CC---ceEEEEEeecCch--------------------hhHHHHHHhCC
Confidence 78999999999999999999999999884 22 7788887765532 22679999999
Q ss_pred CC-CceEEEEcCCCCCCCcccccchhhh
Q 014225 141 EG-IPCLVVLQPYDDKDDATLHDGVELI 167 (428)
Q Consensus 141 ~~-~P~~~lid~~~~dG~i~~~~~~~~i 167 (428)
.+ .|+++++. ||+++....-..|
T Consensus 79 ~h~sPq~il~k----~G~~v~~~SH~~I 102 (112)
T 3iv4_A 79 KHESPQAFYFV----NGEMVWNRDHGDI 102 (112)
T ss_dssp CCCSSEEEEEE----TTEEEEEEEGGGC
T ss_pred ccCCCeEEEEE----CCEEEEEeecccc
Confidence 95 99999998 8988877544433
No 419
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.02 E-value=1.1e-09 Score=95.81 Aligned_cols=68 Identities=24% Similarity=0.352 Sum_probs=56.3
Q ss_pred CCCEEEEEEec-------CCChhhhhhHHHHHHHHHHHhcCC--CcEEEEEEecCCChHHHHHHHhcCCCceeccCChHH
Q 014225 60 EGKVTALYFSA-------NWYPPCGNFTGVLVDVYEELRNNG--SDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLET 130 (428)
Q Consensus 60 ~gk~vlv~F~a-------~wC~~C~~~~p~l~~l~~~~~~~~--~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~ 130 (428)
++.+|+|+||| .||+||+.+.|.+.++++++.... .++.+.-|++|..
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~----------------------- 92 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEV----------------------- 92 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTC-----------------------
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccC-----------------------
Confidence 35689999999 499999999999999999997210 1377777666544
Q ss_pred HHHHHhhcCCCCCceEEEEcC
Q 014225 131 KKALNRKFDIEGIPCLVVLQP 151 (428)
Q Consensus 131 ~~~l~~~~~v~~~P~~~lid~ 151 (428)
..+++.|+|+++|+++++.+
T Consensus 93 -~~la~~~~I~siPtl~~F~~ 112 (178)
T 3ga4_A 93 -PQLVKDLKLQNVPHLVVYPP 112 (178)
T ss_dssp -HHHHHHTTCCSSCEEEEECC
T ss_pred -HHHHHHcCCCCCCEEEEEcC
Confidence 78999999999999999996
No 420
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.58 E-value=3e-11 Score=95.84 Aligned_cols=70 Identities=23% Similarity=0.432 Sum_probs=58.3
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+|+++|.||++||++|+.+.|.+++++++++++ +.++.|+.|.. ..+++.|+
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~------------------------~~~~~~~~ 70 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK---VKVVKVNVDEN------------------------PNTAAQYG 70 (106)
Confidence 4789999999999999999999999999998753 67776655432 56788899
Q ss_pred CCCCceEEEEcCCCCCCCccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATL 160 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~ 160 (428)
+.++|+++++ + +|+++.
T Consensus 71 v~~~Pt~~~~-~---~g~~~~ 87 (106)
T 2yj7_A 71 IRSIPTLLLF-K---NGQVVD 87 (106)
Confidence 9999999999 5 787654
No 421
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.01 E-value=1.1e-09 Score=112.41 Aligned_cols=69 Identities=17% Similarity=0.415 Sum_probs=61.0
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 304 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 304 (428)
.+++++|.|||+||++|+++.|.|.++++.+++. ++.++.|+++.+ ..
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~---------~v~~~~vd~~~~-----------------------~~ 77 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK---------NITLAQIDCTEN-----------------------QD 77 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---------TCEEEEEETTTC-----------------------HH
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC---------CeEEEEEECCCC-----------------------HH
Confidence 4789999999999999999999999999998754 589999988865 67
Q ss_pred HHHhcCcCccceEEEECCCCcE
Q 014225 305 LTKYFDVQGIPCLVIIGPEGKT 326 (428)
Q Consensus 305 ~~~~~~v~~~P~~~lid~~G~i 326 (428)
+++.|+|.++||++++ ++|+.
T Consensus 78 l~~~~~v~~~Pt~~~~-~~g~~ 98 (504)
T 2b5e_A 78 LCMEHNIPGFPSLKIF-KNSDV 98 (504)
T ss_dssp HHHHTTCCSSSEEEEE-ETTCT
T ss_pred HHHhcCCCcCCEEEEE-eCCcc
Confidence 9999999999999999 56663
No 422
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.01 E-value=5.9e-10 Score=108.91 Aligned_cols=71 Identities=15% Similarity=0.214 Sum_probs=60.4
Q ss_pred CCcEEEEEEeccCChhHHhhhHH-------HHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCcccccc
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPK-------LLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 297 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~-------l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~ 297 (428)
.+++++|+|||+||+ |+.++|. ++++++.+++. ++.++.|+++.+
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~---------~v~~~~Vd~~~~------------------ 78 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK---------DIGFVMVDAKKE------------------ 78 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS---------SEEEEEEETTTT------------------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc---------CcEEEEEeCCCC------------------
Confidence 468999999999999 9989998 78888877654 689999988865
Q ss_pred CCcchhHHHHhcCcCccceEEEECCCCcEEec
Q 014225 298 GDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 298 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 329 (428)
..+++.|+|.++||++++ ++|++...
T Consensus 79 -----~~l~~~~~v~~~Pt~~~~-~~g~~~~~ 104 (350)
T 1sji_A 79 -----AKLAKKLGFDEEGSLYVL-KGDRTIEF 104 (350)
T ss_dssp -----HHHHHHHTCCSTTEEEEE-ETTEEEEE
T ss_pred -----HHHHHhcCCCccceEEEE-ECCcEEEe
Confidence 679999999999999999 88885543
No 423
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.00 E-value=7.9e-12 Score=100.57 Aligned_cols=69 Identities=12% Similarity=0.279 Sum_probs=50.9
Q ss_pred EEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHH
Q 014225 53 QVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKK 132 (428)
Q Consensus 53 ~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~ 132 (428)
.+.+++..||+++|+|||+||++|+.+.|.|.+++++++ . |.++.+.. .+.. .
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------~--v~~~~~~~----------------~~~~--~ 56 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------Y--VECSPNGP----------------GTPQ--A 56 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------E--EESCTTCT----------------TSCC--C
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------E--EEEecccc----------------cchh--H
Confidence 456677778999999999999999999999998886542 2 33332100 0011 6
Q ss_pred HHHhhcCCCCCceEEE
Q 014225 133 ALNRKFDIEGIPCLVV 148 (428)
Q Consensus 133 ~l~~~~~v~~~P~~~l 148 (428)
.+++.|+|.++|++++
T Consensus 57 ~l~~~~~V~~~PT~~i 72 (106)
T 3kp8_A 57 QECTEAGITSYPTWII 72 (106)
T ss_dssp HHHHHTTCCSSSEEEE
T ss_pred HHHHHcCCeEeCEEEE
Confidence 7899999999999776
No 424
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.00 E-value=8.4e-10 Score=112.40 Aligned_cols=71 Identities=18% Similarity=0.337 Sum_probs=62.3
Q ss_pred CcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHH
Q 014225 226 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 305 (428)
Q Consensus 226 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 305 (428)
+++++|+|||+||++|+++.|.|.++++.+++. +.++.|+++.+ ..+
T Consensus 21 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~----------v~~~~vd~~~~-----------------------~~l 67 (481)
T 3f8u_A 21 AGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI----------VPLAKVDCTAN-----------------------TNT 67 (481)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT----------CCEEEEETTTC-----------------------HHH
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc----------eEEEEEECCCC-----------------------HHH
Confidence 489999999999999999999999999998754 77888888865 689
Q ss_pred HHhcCcCccceEEEECCCCcEEecc
Q 014225 306 TKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 306 ~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
++.|+|.++||++++ ++|+.+..+
T Consensus 68 ~~~~~v~~~Ptl~~~-~~g~~~~~~ 91 (481)
T 3f8u_A 68 CNKYGVSGYPTLKIF-RDGEEAGAY 91 (481)
T ss_dssp HHHTTCCEESEEEEE-ETTEEEEEC
T ss_pred HHhcCCCCCCEEEEE-eCCceeeee
Confidence 999999999999999 888766553
No 425
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.99 E-value=3.8e-10 Score=85.95 Aligned_cols=60 Identities=23% Similarity=0.436 Sum_probs=51.8
Q ss_pred CEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCC
Q 014225 62 KVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIE 141 (428)
Q Consensus 62 k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~ 141 (428)
.++++.||++||++|+...|.|++++++++++ +.++.|++|.+ ..+++.|++.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~vd~~~~------------------------~~~~~~~~v~ 55 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDA---VEVEYINVMEN------------------------PQKAMEYGIM 55 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSS---EEEEEEESSSS------------------------CCTTTSTTTC
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCc---eEEEEEECCCC------------------------HHHHHHCCCc
Confidence 57899999999999999999999999998743 88998887654 3456789999
Q ss_pred CCceEEE
Q 014225 142 GIPCLVV 148 (428)
Q Consensus 142 ~~P~~~l 148 (428)
++|++++
T Consensus 56 ~~Pt~~~ 62 (85)
T 1fo5_A 56 AVPTIVI 62 (85)
T ss_dssp CSSEEEE
T ss_pred ccCEEEE
Confidence 9999988
No 426
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.98 E-value=3.3e-10 Score=86.29 Aligned_cols=59 Identities=15% Similarity=0.287 Sum_probs=50.7
Q ss_pred EEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCC
Q 014225 63 VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEG 142 (428)
Q Consensus 63 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~ 142 (428)
++++.||++||++|+...|.+++++++++++ +.++.|++|.+ ..+++.|++.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~vd~~~~------------------------~~~~~~~~v~~ 55 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDK---IDVEKIDIMVD------------------------REKAIEYGLMA 55 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSS---CCEEEECTTTC------------------------GGGGGGTCSSC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCC---eEEEEEECCCC------------------------HHHHHhCCcee
Confidence 4689999999999999999999999998753 78888877644 45678899999
Q ss_pred CceEEE
Q 014225 143 IPCLVV 148 (428)
Q Consensus 143 ~P~~~l 148 (428)
+|++++
T Consensus 56 ~Pt~~~ 61 (85)
T 1nho_A 56 VPAIAI 61 (85)
T ss_dssp SSEEEE
T ss_pred eCEEEE
Confidence 999988
No 427
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.97 E-value=9.6e-10 Score=110.24 Aligned_cols=68 Identities=18% Similarity=0.223 Sum_probs=58.0
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCC-----cEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHH
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGS-----DFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKAL 134 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~-----~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l 134 (428)
.+|+|+|+|||+||++|+.+.|.+.++++++++... ++.++.|++|.. ..+
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~------------------------~~l 96 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE------------------------VDL 96 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC------------------------HHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC------------------------HHH
Confidence 348999999999999999999999999999975421 378888776644 678
Q ss_pred HhhcCCCCCceEEEEcC
Q 014225 135 NRKFDIEGIPCLVVLQP 151 (428)
Q Consensus 135 ~~~~~v~~~P~~~lid~ 151 (428)
++.|+|.++|+++++++
T Consensus 97 a~~y~V~~~PTlilf~~ 113 (470)
T 3qcp_A 97 CRKYDINFVPRLFFFYP 113 (470)
T ss_dssp HHHTTCCSSCEEEEEEE
T ss_pred HHHcCCCccCeEEEEEC
Confidence 99999999999999986
No 428
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.96 E-value=9.1e-11 Score=97.13 Aligned_cols=71 Identities=24% Similarity=0.476 Sum_probs=58.7
Q ss_pred CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhc
Q 014225 59 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 138 (428)
Q Consensus 59 ~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 138 (428)
.++|+++|+||++||++|+.+.|.|.+++++++ + +.++.|++|.. ..+++.|
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~--v~~~~v~~~~~------------------------~~~~~~~ 85 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--G--AVFLKVDVDEL------------------------KEVAEKY 85 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--T--BCCEECCTTTS------------------------GGGHHHH
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--C--CEEEEEeccch------------------------HHHHHHc
Confidence 468999999999999999999999999999985 2 77777766543 4577889
Q ss_pred CCCCCceEEEEcCCCCCCCcccc
Q 014225 139 DIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 139 ~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
++.++|+++++ + +|+++.+
T Consensus 86 ~v~~~Pt~~~~-~---~g~~~~~ 104 (130)
T 1wmj_A 86 NVEAMPTFLFI-K---DGAEADK 104 (130)
T ss_dssp TCCSSCCCCBC-T---TTTCCBC
T ss_pred CCCccceEEEE-e---CCeEEEE
Confidence 99999998887 5 8877644
No 429
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.95 E-value=4.3e-10 Score=95.30 Aligned_cols=69 Identities=13% Similarity=0.292 Sum_probs=49.5
Q ss_pred CCEEEEEEecCC--ChhhhhhHHHHHHHHHHHhcCCCcEE--EEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHh
Q 014225 61 GKVTALYFSANW--YPPCGNFTGVLVDVYEELRNNGSDFE--VVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 136 (428)
Q Consensus 61 gk~vlv~F~a~w--C~~C~~~~p~l~~l~~~~~~~~~~~~--ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 136 (428)
++.++|+||++| |++|+.+.|.|.+++++| ++ +. ++.|++|. ...+++
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~---v~~~~~~Vd~d~------------------------~~~la~ 85 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQ---FDWQVAVADLEQ------------------------SEAIGD 85 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TT---SCCEEEEECHHH------------------------HHHHHH
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cc---cceeEEEEECCC------------------------CHHHHH
Confidence 345788999887 999999999999999998 43 66 77775532 278999
Q ss_pred hcCCCCCceEEEEcCCCCCCCcccc
Q 014225 137 KFDIEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 137 ~~~v~~~P~~~lid~~~~dG~i~~~ 161 (428)
.|+|.++||++++ + +|+++.+
T Consensus 86 ~~~V~~iPT~~~f-k---~G~~v~~ 106 (142)
T 2es7_A 86 RFNVRRFPATLVF-T---DGKLRGA 106 (142)
T ss_dssp TTTCCSSSEEEEE-S---CC----C
T ss_pred hcCCCcCCeEEEE-e---CCEEEEE
Confidence 9999999999999 5 8987654
No 430
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.94 E-value=6.5e-10 Score=102.71 Aligned_cols=69 Identities=10% Similarity=0.183 Sum_probs=56.8
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
+|++|||+|||+||++|+.+.|.|.+++++|.+ +.++.|+++. ..+++.|+
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~----v~f~kVd~d~-------------------------~~l~~~~~ 182 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPM----VKFCKIKASN-------------------------TGAGDRFS 182 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT----SEEEEEEHHH-------------------------HCCTTSSC
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC----CEEEEEeCCc-------------------------HHHHHHCC
Confidence 489999999999999999999999999999853 6777775532 23556799
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++||++++. +|+++..
T Consensus 183 I~~~PTll~~~----~G~~v~~ 200 (245)
T 1a0r_P 183 SDVLPTLLVYK----GGELLSN 200 (245)
T ss_dssp TTTCSEEEEEE----TTEEEEE
T ss_pred CCCCCEEEEEE----CCEEEEE
Confidence 99999998886 7987654
No 431
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.93 E-value=5e-09 Score=89.66 Aligned_cols=94 Identities=12% Similarity=0.213 Sum_probs=65.9
Q ss_pred CCcEEEEEEeccCChhHHhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcc
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 301 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~ 301 (428)
.||+|+|+|+++||++|+.+.... .++.+.+++ ++.++.+.++...
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~----------~fv~v~~d~~~~~--------------------- 89 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE----------HFIFWQVYHDSEE--------------------- 89 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH----------TEEEEEEESSSHH---------------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc----------CeEEEEEecCCHh---------------------
Confidence 489999999999999999986654 345555544 3667777665321
Q ss_pred hhHHHHhcCcCccceEEEECCC-CcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 302 IKELTKYFDVQGIPCLVIIGPE-GKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 302 ~~~~~~~~~v~~~P~~~lid~~-G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
...+.+.|++.++|++++||++ |+.+...++ .+ .+++.+.|++.+...
T Consensus 90 ~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g------------~~---~~~fl~~L~~~l~~~ 138 (153)
T 2dlx_A 90 GQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ------------LD---VSSFLDQVTGFLGEH 138 (153)
T ss_dssp HHHHHHHHTCCSSSEEEEECTTTCCCCEEESS------------CC---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC------------CC---HHHHHHHHHHHHHhc
Confidence 3568889999999999999998 766544221 11 256666666666543
No 432
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.92 E-value=4.5e-09 Score=103.34 Aligned_cols=73 Identities=10% Similarity=0.063 Sum_probs=58.7
Q ss_pred CCcEEEEEEeccCChhHHhhh------HHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccC
Q 014225 225 VGKTVGLYFSARWCIPCEKFM------PKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFG 298 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~------~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~ 298 (428)
.+++++|.|||+||++|.... |.++++++.++.. ++.++.|+++.+
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~---------~v~~~~Vd~~~~------------------- 80 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK---------GVGFGLVDSEKD------------------- 80 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT---------TEEEEEEETTTT-------------------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC---------CceEEEEeCccc-------------------
Confidence 368999999999999973322 5788888887644 688998888865
Q ss_pred CcchhHHHHhcCcCccceEEEECCCCcEEecc
Q 014225 299 DPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 299 ~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 330 (428)
..+++.|+|+++||++++ ++|+++...
T Consensus 81 ----~~l~~~~~V~~~PTl~~f-~~G~~~~y~ 107 (367)
T 3us3_A 81 ----AAVAKKLGLTEEDSIYVF-KEDEVIEYD 107 (367)
T ss_dssp ----HHHHHHHTCCSTTEEEEE-ETTEEEECC
T ss_pred ----HHHHHHcCCCcCceEEEE-ECCcEEEeC
Confidence 689999999999999999 688876443
No 433
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.92 E-value=1e-09 Score=101.68 Aligned_cols=65 Identities=12% Similarity=0.200 Sum_probs=52.2
Q ss_pred CcEEEEEEeccC--ChhHHhhhHHHHHHHHHHHhhhhhcCCCCCC--EEEEEEEcCCCHHHHHHHHhcCCccccccCCcc
Q 014225 226 GKTVGLYFSARW--CIPCEKFMPKLLSIYQKIKQNLVEKGDALED--FEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 301 (428)
Q Consensus 226 gk~vll~F~a~w--C~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~--~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~ 301 (428)
+++|+|.||++| |++|+.+.+.+.++++.+... ... +.++.++.|.+
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~-------~~~~~v~~~~vd~d~~---------------------- 75 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTR-------NGGKLLKLNVYYRESD---------------------- 75 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEE-------TTEESEEEEEEETTTT----------------------
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCC-------CCCceeEEEEecCCcC----------------------
Confidence 367899999999 999999999999998874210 011 77777777754
Q ss_pred hhHHHHhcCcCccceEEEE
Q 014225 302 IKELTKYFDVQGIPCLVII 320 (428)
Q Consensus 302 ~~~~~~~~~v~~~P~~~li 320 (428)
.++++.|||.++||+.++
T Consensus 76 -~~~~~~~gv~~~Pt~~i~ 93 (243)
T 2hls_A 76 -SDKFSEFKVERVPTVAFL 93 (243)
T ss_dssp -HHHHHHTTCCSSSEEEET
T ss_pred -HHHHHhcCCCcCCEEEEE
Confidence 678999999999999988
No 434
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.92 E-value=2.4e-10 Score=92.75 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=53.4
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
+...+||+|||+||++|+.+.+.+...++.... +..+.++.|+++.+.. ..++..|+
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~-~~~~~l~~vdv~~~~~----------------------~~la~~~~ 73 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDE-GRAAPVQRLQMRDPLP----------------------PGLELARP 73 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH-HHHSCEEEEETTSCCC----------------------TTCBCSSC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh-cccceEEEEECCCCCc----------------------hhHHHHCC
Confidence 456899999999999999998766554433211 0125677777776532 35567789
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
|.++||+++++ +|+.+.+
T Consensus 74 V~g~PT~i~f~----~G~ev~R 91 (116)
T 3dml_A 74 VTFTPTFVLMA----GDVESGR 91 (116)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CCCCCEEEEEE----CCEEEee
Confidence 99999999999 7977764
No 435
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.89 E-value=3.3e-09 Score=79.21 Aligned_cols=55 Identities=13% Similarity=0.110 Sum_probs=46.7
Q ss_pred EEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCCC
Q 014225 64 TALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGI 143 (428)
Q Consensus 64 vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~ 143 (428)
..|+||++||++|+.+.|.+++++++++.. +.++.|+ . ..+++.|++.++
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~---~~~~~v~-----~----------------------~~~~~~~~v~~~ 51 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGID---AEFEKIK-----E----------------------MDQILEAGLTAL 51 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCC---EEEEEEC-----S----------------------HHHHHHHTCSSS
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCc---eEEEEec-----C----------------------HHHHHHCCCCcC
Confidence 468999999999999999999999998653 7777663 1 678889999999
Q ss_pred ceEEE
Q 014225 144 PCLVV 148 (428)
Q Consensus 144 P~~~l 148 (428)
|++++
T Consensus 52 Pt~~~ 56 (77)
T 1ilo_A 52 PGLAV 56 (77)
T ss_dssp SCEEE
T ss_pred CEEEE
Confidence 99988
No 436
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.89 E-value=7.6e-10 Score=100.67 Aligned_cols=69 Identities=12% Similarity=0.177 Sum_probs=57.6
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
+|++|+|+||++||++|+.+.|.|.+++++|. ++.++.|+++ . ..+++.|+
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~----~v~f~~vd~~---~----------------------~~l~~~~~ 169 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP----MVKFCKIRAS---N----------------------TGAGDRFS 169 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT----TSEEEEEEHH---H----------------------HTCSTTSC
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC----CeEEEEEECC---c----------------------HHHHHHCC
Confidence 46899999999999999999999999999984 2778877654 1 45667899
Q ss_pred CCCCceEEEEcCCCCCCCcccc
Q 014225 140 IEGIPCLVVLQPYDDKDDATLH 161 (428)
Q Consensus 140 v~~~P~~~lid~~~~dG~i~~~ 161 (428)
+.++||++++. +|+++..
T Consensus 170 i~~~PTl~~~~----~G~~v~~ 187 (217)
T 2trc_P 170 SDVLPTLLVYK----GGELISN 187 (217)
T ss_dssp GGGCSEEEEEE----TTEEEEE
T ss_pred CCCCCEEEEEE----CCEEEEE
Confidence 99999999996 7887644
No 437
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.80 E-value=1.2e-08 Score=81.53 Aligned_cols=65 Identities=22% Similarity=0.435 Sum_probs=54.2
Q ss_pred EEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHHH
Q 014225 228 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTK 307 (428)
Q Consensus 228 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 307 (428)
.+++.||++||++|....+.|.++.+++ ++.+..|++|.+ .++..
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~------------~i~~~~vDId~d-----------------------~~l~~ 74 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS------------WFELEVINIDGN-----------------------EHLTR 74 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS------------CCCCEEEETTTC-----------------------HHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc------------CCeEEEEECCCC-----------------------HHHHH
Confidence 5688999999999999999999988765 367788888866 56788
Q ss_pred hcCcCccceEEEECCCCcEEec
Q 014225 308 YFDVQGIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 308 ~~~v~~~P~~~lid~~G~i~~~ 329 (428)
.|++. +|+++++ .+|+++..
T Consensus 75 ~ygv~-VP~l~~~-~dG~~v~~ 94 (107)
T 2fgx_A 75 LYNDR-VPVLFAV-NEDKELCH 94 (107)
T ss_dssp HSTTS-CSEEEET-TTTEEEEC
T ss_pred HhCCC-CceEEEE-ECCEEEEe
Confidence 89997 9999888 78988743
No 438
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.80 E-value=1.1e-08 Score=85.35 Aligned_cols=92 Identities=10% Similarity=0.088 Sum_probs=69.6
Q ss_pred CcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHH
Q 014225 226 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 305 (428)
Q Consensus 226 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 305 (428)
+++|+++||++ |++|+.+.|.|.+++++|+++ +.++.|++|.. ..+
T Consensus 23 ~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk----------~~f~~vd~d~~-----------------------~~~ 68 (133)
T 2djk_A 23 GIPLAYIFAET-AEERKELSDKLKPIAEAQRGV----------INFGTIDAKAF-----------------------GAH 68 (133)
T ss_dssp TSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT----------SEEEEECTTTT-----------------------GGG
T ss_pred CCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe----------EEEEEEchHHh-----------------------HHH
Confidence 46799999999 899999999999999999765 78888888754 568
Q ss_pred HHhcCcCc--cceEEEECC-CCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhcC
Q 014225 306 TKYFDVQG--IPCLVIIGP-EGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 364 (428)
Q Consensus 306 ~~~~~v~~--~P~~~lid~-~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~~ 364 (428)
+..|||++ +|++++++. +|+. ++.. ..| .++. +.|.+.+++.+.+.
T Consensus 69 a~~~gi~~~~iPtl~i~~~~~g~~-~~~~-----~~g----~~~~---~~l~~fi~~~l~Gk 117 (133)
T 2djk_A 69 AGNLNLKTDKFPAFAIQEVAKNQK-FPFD-----QEK----EITF---EAIKAFVDDFVAGK 117 (133)
T ss_dssp TTTTTCCSSSSSEEEEECTTTCCB-CCCC-----SSS----CCCH---HHHHHHHHHHHHTC
T ss_pred HHHcCCCcccCCEEEEEecCcCcc-cCCC-----Ccc----ccCH---HHHHHHHHHHHcCC
Confidence 89999999 999999964 4665 3311 001 1233 56677777777654
No 439
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.76 E-value=6.4e-08 Score=87.79 Aligned_cols=94 Identities=16% Similarity=0.215 Sum_probs=60.4
Q ss_pred eecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC----CH-------------
Q 014225 218 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR----DQ------------- 280 (428)
Q Consensus 218 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~----~~------------- 280 (428)
.+.+....++++++.||++|||+|+++.|.|.++.+ . ++.|+.+.... +.
T Consensus 78 ~~~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~----~---------~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d 144 (216)
T 1eej_A 78 MIVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNA----L---------GITVRYLAFPRQGLDSDAEKEMKAIWCAKD 144 (216)
T ss_dssp SEEECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHH----T---------TEEEEEEECCTTCSSSHHHHHHHHHHTSSS
T ss_pred CeeecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHh----C---------CcEEEEEECCccCCCchHHHHHHHHHhccC
Confidence 344555568999999999999999999999888754 2 46777665531 11
Q ss_pred --HHHHHHHhcCCcc--ccccCCcchhHHHHhcCcCccceEEEECCCCcE
Q 014225 281 --TSFESYFGTMPWL--ALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 326 (428)
Q Consensus 281 --~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 326 (428)
..+..++...+.- ......+....+++.|||.++|++++ .+|+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~--~dG~~ 192 (216)
T 1eej_A 145 KNKAFDDVMAGKSVAPASCDVDIADHYALGVQLGVSGTPAVVL--SNGTL 192 (216)
T ss_dssp HHHHHHHHHTTCCCCCCCCSCCHHHHHHHHHHHTCCSSSEEEC--TTSCE
T ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHcCCCccCEEEE--cCCeE
Confidence 1233333322210 11223345677899999999999854 35654
No 440
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.74 E-value=7.3e-08 Score=84.06 Aligned_cols=39 Identities=13% Similarity=0.161 Sum_probs=34.0
Q ss_pred eecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHH
Q 014225 218 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIK 256 (428)
Q Consensus 218 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~ 256 (428)
...+....++++|+.||.+|||+|..+.|.|.++.+++.
T Consensus 14 ~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 52 (175)
T 3gyk_A 14 APVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP 52 (175)
T ss_dssp SCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCC
Confidence 456677778999999999999999999999999888754
No 441
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.73 E-value=2.1e-08 Score=77.18 Aligned_cols=58 Identities=19% Similarity=0.316 Sum_probs=45.9
Q ss_pred EEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHHHhc
Q 014225 230 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 309 (428)
Q Consensus 230 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 309 (428)
++.||++||++|+...|.|.++..++ +..|++|.+ .+++..|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~---------------~~~vdid~~-----------------------~~l~~~~ 44 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA---------------FFSVFIDDD-----------------------AALESAY 44 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC---------------EEEEECTTC-----------------------HHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh---------------eEEEECCCC-----------------------HHHHHHh
Confidence 67899999999999999887653211 456778765 5688889
Q ss_pred CcCccceEEEECCCCcEEe
Q 014225 310 DVQGIPCLVIIGPEGKTVT 328 (428)
Q Consensus 310 ~v~~~P~~~lid~~G~i~~ 328 (428)
|++ +|++++ .+|+.+.
T Consensus 45 g~~-vPtl~~--~~G~~v~ 60 (87)
T 1ttz_A 45 GLR-VPVLRD--PMGRELD 60 (87)
T ss_dssp TTT-CSEEEC--TTCCEEE
T ss_pred CCC-cCeEEE--ECCEEEe
Confidence 998 999987 7798875
No 442
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.71 E-value=4.4e-08 Score=83.78 Aligned_cols=72 Identities=14% Similarity=0.206 Sum_probs=52.9
Q ss_pred CCCEEEEEEecCCChhhhhhHHHH---HHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHh
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 136 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 136 (428)
+||+|+|+|+++||.+|+.+.... .++.+.++++ +.++-+++|.... ..+.+
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~---fv~v~~d~~~~~~----------------------~~l~~ 95 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREH---FIFWQVYHDSEEG----------------------QRYIQ 95 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHT---EEEEEEESSSHHH----------------------HHHHH
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcC---eEEEEEecCCHhH----------------------HHHHH
Confidence 489999999999999999985433 3344444443 6666655533211 67889
Q ss_pred hcCCCCCceEEEEcCCCCC-CCcc
Q 014225 137 KFDIEGIPCLVVLQPYDDK-DDAT 159 (428)
Q Consensus 137 ~~~v~~~P~~~lid~~~~d-G~i~ 159 (428)
.|++.++|+++|||+ + |+.+
T Consensus 96 ~y~v~~~P~~~fld~---~~G~~l 116 (153)
T 2dlx_A 96 FYKLGDFPYVSILDP---RTGQKL 116 (153)
T ss_dssp HHTCCSSSEEEEECT---TTCCCC
T ss_pred HcCCCCCCEEEEEeC---CCCcEe
Confidence 999999999999999 8 7554
No 443
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.69 E-value=1.1e-08 Score=77.44 Aligned_cols=65 Identities=18% Similarity=0.253 Sum_probs=48.3
Q ss_pred EEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHHHhc
Q 014225 230 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 309 (428)
Q Consensus 230 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 309 (428)
++.||++|||+|+...+.|.++.+++ ++.+..+.+|.+. ...++.+.|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~------------~~~~~~~~v~~~~--------------------~~~~~~~~~ 51 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS------------KYTVEIVHLGTDK--------------------ARIAEAEKA 51 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT------------TEEEEEEETTTCS--------------------STHHHHHHH
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc------------CCeEEEEEecCCh--------------------hhHHHHHHc
Confidence 67789999999999999998876543 3455556665321 025677889
Q ss_pred CcCccceEEEECCCCcEEec
Q 014225 310 DVQGIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 310 ~v~~~P~~~lid~~G~i~~~ 329 (428)
|+.++|++++ +|+++..
T Consensus 52 gv~~vPt~~i---~g~~~~~ 68 (80)
T 2k8s_A 52 GVKSVPALVI---DGAAFHI 68 (80)
T ss_dssp TCCEEEEEEE---TTEEEEE
T ss_pred CCCcCCEEEE---CCEEEEe
Confidence 9999999876 7887654
No 444
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.67 E-value=1.6e-07 Score=86.77 Aligned_cols=70 Identities=11% Similarity=0.148 Sum_probs=56.0
Q ss_pred CCcEEEEEEe--ccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcch
Q 014225 225 VGKTVGLYFS--ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 302 (428)
Q Consensus 225 ~gk~vll~F~--a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 302 (428)
.+++|+|.|| ||||+ +.|.|.++++.|+.. .+++.|+.|++|... ....
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~-------~~~v~~akVD~d~~g------------------~~~n 82 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKA-------TKDLLIATVGVKDYG------------------ELEN 82 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHH-------CSSEEEEEEEECSST------------------TCTT
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhcc-------CCCeEEEEEECCccc------------------cccc
Confidence 4589999999 99998 999999999999752 136889999987500 0002
Q ss_pred hHHHHhcCcC--ccceEEEECCCCc
Q 014225 303 KELTKYFDVQ--GIPCLVIIGPEGK 325 (428)
Q Consensus 303 ~~~~~~~~v~--~~P~~~lid~~G~ 325 (428)
.++++.|+|. ++||++++ + |+
T Consensus 83 ~~la~~~~V~~~~~PTl~~F-~-G~ 105 (248)
T 2c0g_A 83 KALGDRYKVDDKNFPSIFLF-K-GN 105 (248)
T ss_dssp HHHHHHTTCCTTSCCEEEEE-S-SS
T ss_pred HHHHHHhCCCcCCCCeEEEE-e-CC
Confidence 6899999999 99999999 5 76
No 445
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.59 E-value=1.5e-07 Score=83.76 Aligned_cols=44 Identities=25% Similarity=0.224 Sum_probs=37.8
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
..++++|+.||++|||+|..+.|.+.++.+++.+ ++.++.+.++
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~~~~ 66 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ----------DVVLKQVPIA 66 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT----------TEEEEEEECC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC----------CeEEEEEecc
Confidence 3579999999999999999999999999887754 3788888876
No 446
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.56 E-value=2.6e-07 Score=81.99 Aligned_cols=43 Identities=26% Similarity=0.381 Sum_probs=36.2
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
.++++|+.||.+|||+|..+.|.|.++.+++.. ++.+..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS----------DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT----------TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC----------ceEEEEeccc
Confidence 578999999999999999999999998888753 4777777763
No 447
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.56 E-value=1.8e-07 Score=71.10 Aligned_cols=66 Identities=15% Similarity=0.301 Sum_probs=49.7
Q ss_pred EEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHHHhc
Q 014225 230 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 309 (428)
Q Consensus 230 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 309 (428)
++.|+++|||+|+...+.|.++..+++ ++.+..++++.+.. ...++.+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~-----------~i~~~~vdi~~~~~-------------------~~~~l~~~~ 52 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD-----------DFQYQYVDIRAEGI-------------------TKEDLQQKA 52 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS-----------SCEEEEECHHHHTC-------------------CSHHHHHHT
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC-----------CceEEEEecccChH-------------------HHHHHHHHh
Confidence 677999999999999999999887653 57788777753210 014688888
Q ss_pred C--cCccceEEEECCCCcEEe
Q 014225 310 D--VQGIPCLVIIGPEGKTVT 328 (428)
Q Consensus 310 ~--v~~~P~~~lid~~G~i~~ 328 (428)
| +.++|+++ + +|+.+.
T Consensus 53 ~~~~~~vP~i~-~--~g~~i~ 70 (85)
T 1ego_A 53 GKPVETVPQIF-V--DQQHIG 70 (85)
T ss_dssp CCCSCCSCEEE-E--TTEEEE
T ss_pred CCCCceeCeEE-E--CCEEEE
Confidence 8 99999985 4 577764
No 448
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.54 E-value=3e-07 Score=81.45 Aligned_cols=43 Identities=21% Similarity=0.254 Sum_probs=36.0
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
.++++|+.||.+|||+|..+.|.|.++.+++.+ ++.+..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA----------DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT----------TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC----------CeEEEEEehh
Confidence 578999999999999999999999988887754 3777766663
No 449
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.52 E-value=1.9e-07 Score=75.51 Aligned_cols=68 Identities=21% Similarity=0.363 Sum_probs=46.2
Q ss_pred CcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHH
Q 014225 226 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 305 (428)
Q Consensus 226 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 305 (428)
++++++ ||++|||+|+.+.|.|.++.. .+.++.|..+.+..+. ...+
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~--------------~~~~v~v~~~~~~~~~------------------~~~l 65 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGA--------------SYKVVELDELSDGSQL------------------QSAL 65 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTC--------------CCEEEEGGGSTTHHHH------------------HHHH
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCC--------------CeEEEEccCCCChHHH------------------HHHH
Confidence 345555 999999999999998887532 2444444433321111 2468
Q ss_pred HHhcCcCccceEEEECCCCcEEec
Q 014225 306 TKYFDVQGIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 306 ~~~~~v~~~P~~~lid~~G~i~~~ 329 (428)
.+.|++.++|++ ++ +|+++..
T Consensus 66 ~~~~~v~~~Pt~-~~--~g~~v~~ 86 (116)
T 2e7p_A 66 AHWTGRGTVPNV-FI--GGKQIGG 86 (116)
T ss_dssp HHHHSCCSSCEE-EE--TTEEEEC
T ss_pred HHHhCCCCcCEE-EE--CCEEECC
Confidence 889999999999 44 6888765
No 450
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.51 E-value=4.5e-07 Score=83.41 Aligned_cols=70 Identities=16% Similarity=0.215 Sum_probs=55.5
Q ss_pred CCcEEEEEEec--cCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcch
Q 014225 225 VGKTVGLYFSA--RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 302 (428)
Q Consensus 225 ~gk~vll~F~a--~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~ 302 (428)
.+++|+|.||| |||+ +.|.|.++++.+++. +++.|+.|++|... .+..
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~--------~~v~~akVDvd~~g------------------~~~~ 70 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASS--------DDLLVAEVGISDYG------------------DKLN 70 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTC--------TTEEEEEECCCCSS------------------SCCS
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCC--------CCeEEEEEeCCccc------------------chhh
Confidence 35799999999 9998 999999999998642 36888888876300 0013
Q ss_pred hHHHHhcCcC--ccceEEEECCCCc
Q 014225 303 KELTKYFDVQ--GIPCLVIIGPEGK 325 (428)
Q Consensus 303 ~~~~~~~~v~--~~P~~~lid~~G~ 325 (428)
.++++.|+|. ++||++++ ++|+
T Consensus 71 ~~l~~~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 71 MELSEKYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp HHHHHHTTCCGGGCSEEEEE-ETTC
T ss_pred HHHHHHcCCCCCCCCEEEEE-eCCC
Confidence 7899999999 99999999 7776
No 451
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.50 E-value=1.1e-07 Score=79.28 Aligned_cols=63 Identities=13% Similarity=0.177 Sum_probs=53.7
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
.+++|+|+|||+ |++|+...|.|.+++++|+++ +.++.|++|.. ..+++.||
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk---~~f~~vd~d~~------------------------~~~a~~~g 73 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV---INFGTIDAKAF------------------------GAHAGNLN 73 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT---SEEEEECTTTT------------------------GGGTTTTT
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe---EEEEEEchHHh------------------------HHHHHHcC
Confidence 357899999999 899999999999999999775 77777766533 55778899
Q ss_pred CCC--CceEEEEc
Q 014225 140 IEG--IPCLVVLQ 150 (428)
Q Consensus 140 v~~--~P~~~lid 150 (428)
+.+ +|++++++
T Consensus 74 i~~~~iPtl~i~~ 86 (133)
T 2djk_A 74 LKTDKFPAFAIQE 86 (133)
T ss_dssp CCSSSSSEEEEEC
T ss_pred CCcccCCEEEEEe
Confidence 999 99999998
No 452
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.49 E-value=1.7e-06 Score=78.83 Aligned_cols=194 Identities=10% Similarity=0.104 Sum_probs=114.1
Q ss_pred CCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCC
Q 014225 61 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 140 (428)
Q Consensus 61 gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 140 (428)
.++++|-|+++|| ....+.+.++++.+. . +.+... . + ..+++.|++
T Consensus 27 ~~v~vVgff~~~~---~~~~~~f~~~A~~l~-~---~~F~~t-~----------------------~----~~v~~~~~v 72 (227)
T 4f9z_D 27 TEVAVIGFFQDLE---IPAVPILHSMVQKFP-G---VSFGIS-T----------------------D----SEVLTHYNI 72 (227)
T ss_dssp SSEEEEEECSCSC---STHHHHHHHHTTTCT-T---SEEEEE-C----------------------C----HHHHHHTTC
T ss_pred CCeEEEEEecCCC---chhHHHHHHHHHhCC-C---ceEEEE-C----------------------C----HHHHHHcCC
Confidence 5799999999996 677888888888873 2 444432 1 1 577888999
Q ss_pred CCCceEEEEcCCCCCCC-cccccchhhhhhcccCccccchhhHHHHHHHHHHHHHHHHHhhhhccCCCCcccCCCCCcee
Q 014225 141 EGIPCLVVLQPYDDKDD-ATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGHPPDEKV 219 (428)
Q Consensus 141 ~~~P~~~lid~~~~dG~-i~~~~~~~~i~~~g~~~~p~t~~~~~~l~~~~~~~~~~~~~~~~~g~~~p~f~l~~~g~~~v 219 (428)
.. |+++++.+ ... ....++.. .+ +.+.. .+...... ...|-+. ..+.. .
T Consensus 73 ~~-p~i~lfk~---~~~~~~~~~~~~----~g----~~~~~---~l~~fi~~------------~~~plv~-e~t~~-n- 122 (227)
T 4f9z_D 73 TG-NTICLFRL---VDNEQLNLEDED----IE----SIDAT---KLSRFIEI------------NSLHMVT-EYNPV-T- 122 (227)
T ss_dssp CS-SEEEEEET---TTTEEEEECHHH----HH----TCCHH---HHHHHHHH------------HCCCSEE-ECCHH-H-
T ss_pred CC-CeEEEEEe---cCcccccccccc----cC----CCCHH---HHHHHHHH------------hCCCcee-ecCcc-c-
Confidence 87 99998886 221 11110000 00 11111 22221111 1122222 11111 1
Q ss_pred cccc-c-CC-cEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccc
Q 014225 220 PVSS-L-VG-KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALP 296 (428)
Q Consensus 220 ~l~~-~-~g-k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~ 296 (428)
... + .+ +.+++.|..+||+.|....+.+.+++++|+++ +.++.|..+...
T Consensus 123 -~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~----------i~F~~vd~~~~~---------------- 175 (227)
T 4f9z_D 123 -VIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK----------ILFILVDSGMKE---------------- 175 (227)
T ss_dssp -HHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT----------CEEEEEETTSGG----------------
T ss_pred -HHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC----------EEEEEeCCccHh----------------
Confidence 011 1 23 34556677889999999999999999999865 778888776321
Q ss_pred cCCcchhHHHHhcCcC--ccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHhc
Q 014225 297 FGDPTIKELTKYFDVQ--GIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKN 363 (428)
Q Consensus 297 ~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~~ 363 (428)
...+.+.||+. .+|++.+++..+...+..-. + .++. +.|.+.++..+.+
T Consensus 176 -----~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~------~----~~t~---~~i~~Fv~~~~~G 226 (227)
T 4f9z_D 176 -----NGKVISFFKLKESQLPALAIYQTLDDEWDTLPT------A----EVSV---EHVQNFCDGFLSG 226 (227)
T ss_dssp -----GHHHHHHTTCCGGGCSEEEEEESSSCCEEEETT------C----CCCH---HHHHHHHHHHHTT
T ss_pred -----HHHHHHHcCCCcccCCEEEEEECCCCccccCCc------C----CCCH---HHHHHHHHHHhCC
Confidence 24567889998 89999999865543222100 0 2343 5567777766654
No 453
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.46 E-value=1.7e-07 Score=74.87 Aligned_cols=63 Identities=16% Similarity=0.297 Sum_probs=50.4
Q ss_pred EEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCC
Q 014225 63 VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEG 142 (428)
Q Consensus 63 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~ 142 (428)
.+++.||++||++|+...|.|.++.+++ + +.+..|++|.+ ..+++.|++.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~--i~~~~vDId~d------------------------~~l~~~ygv~- 79 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS---W--FELEVINIDGN------------------------EHLTRLYNDR- 79 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS---C--CCCEEEETTTC------------------------HHHHHHSTTS-
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc---C--CeEEEEECCCC------------------------HHHHHHhCCC-
Confidence 6789999999999999999999998875 3 55666666654 4567779987
Q ss_pred CceEEEEcCCCCCCCcc
Q 014225 143 IPCLVVLQPYDDKDDAT 159 (428)
Q Consensus 143 ~P~~~lid~~~~dG~i~ 159 (428)
+|+++++. +|+.+
T Consensus 80 VP~l~~~~----dG~~v 92 (107)
T 2fgx_A 80 VPVLFAVN----EDKEL 92 (107)
T ss_dssp CSEEEETT----TTEEE
T ss_pred CceEEEEE----CCEEE
Confidence 99988776 67655
No 454
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.46 E-value=3.3e-07 Score=72.40 Aligned_cols=63 Identities=16% Similarity=0.204 Sum_probs=47.4
Q ss_pred CcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHH
Q 014225 226 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 305 (428)
Q Consensus 226 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 305 (428)
.+++++.|+++|||+|+...+.|.++.+ ++.+..|++|... ..++
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~--------------~i~~~~vdi~~~~---------------------~~el 59 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD--------------RFILQEVDITLPE---------------------NSTW 59 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS--------------SSEEEEEETTSST---------------------THHH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh--------------CCeEEEEECCCcc---------------------hHHH
Confidence 4568888999999999999998876432 3678888887221 2678
Q ss_pred HHhcCcCccceEEEECCCCcEE
Q 014225 306 TKYFDVQGIPCLVIIGPEGKTV 327 (428)
Q Consensus 306 ~~~~~v~~~P~~~lid~~G~i~ 327 (428)
.+.|| .++|+++ + +|+.+
T Consensus 60 ~~~~g-~~vP~l~-~--~g~~~ 77 (100)
T 1wjk_A 60 YERYK-FDIPVFH-L--NGQFL 77 (100)
T ss_dssp HHHSS-SSCSEEE-E--SSSEE
T ss_pred HHHHC-CCCCEEE-E--CCEEE
Confidence 88999 9999764 4 57664
No 455
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.45 E-value=5.2e-07 Score=81.71 Aligned_cols=86 Identities=17% Similarity=0.236 Sum_probs=55.6
Q ss_pred cccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC----Ch---------------HHHHHHHh
Q 014225 56 VSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE----DL---------------NAFNNYRA 116 (428)
Q Consensus 56 l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~----~~---------------~~~~~~~~ 116 (428)
+....||++++.||++|||+|+++.|.|+++.+. + +.++.+.... .. ..+.+++.
T Consensus 81 ~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~--v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~ 154 (216)
T 1eej_A 81 YKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----G--ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMA 154 (216)
T ss_dssp ECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----T--EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHT
T ss_pred ecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----C--cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHh
Confidence 3344688999999999999999999999887642 3 7777665421 11 12222222
Q ss_pred cCCCc--eeccCChHHHHHHHhhcCCCCCceEEE
Q 014225 117 CMPWL--AVPYSDLETKKALNRKFDIEGIPCLVV 148 (428)
Q Consensus 117 ~~~~~--~~~~~d~~~~~~l~~~~~v~~~P~~~l 148 (428)
..+.. ... ...+....+++.||+.++|++++
T Consensus 155 ~~~~~~~~~~-~~v~~~~~l~~~~gV~gtPt~v~ 187 (216)
T 1eej_A 155 GKSVAPASCD-VDIADHYALGVQLGVSGTPAVVL 187 (216)
T ss_dssp TCCCCCCCCS-CCHHHHHHHHHHHTCCSSSEEEC
T ss_pred CCCCChhHHH-HHHHHHHHHHHHcCCCccCEEEE
Confidence 22211 111 13344478999999999999854
No 456
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.43 E-value=2.5e-07 Score=74.74 Aligned_cols=63 Identities=19% Similarity=0.273 Sum_probs=42.3
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
+++.|++ ||++||++|+...|.|+++..+ +.++ .+|.+.. .......+.+.|+
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~~-------~~~v--~v~~~~~-----------------~~~~~~~l~~~~~ 70 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGAS-------YKVV--ELDELSD-----------------GSQLQSALAHWTG 70 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTCC-------CEEE--EGGGSTT-----------------HHHHHHHHHHHHS
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCCC-------eEEE--EccCCCC-----------------hHHHHHHHHHHhC
Confidence 3556666 9999999999999988876322 4444 4443321 0111257888999
Q ss_pred CCCCceEEEEc
Q 014225 140 IEGIPCLVVLQ 150 (428)
Q Consensus 140 v~~~P~~~lid 150 (428)
+.++|++ +++
T Consensus 71 v~~~Pt~-~~~ 80 (116)
T 2e7p_A 71 RGTVPNV-FIG 80 (116)
T ss_dssp CCSSCEE-EET
T ss_pred CCCcCEE-EEC
Confidence 9999998 443
No 457
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.41 E-value=7.1e-07 Score=77.70 Aligned_cols=50 Identities=18% Similarity=0.232 Sum_probs=40.0
Q ss_pred CCCEEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEe
Q 014225 50 HGTQVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVS 103 (428)
Q Consensus 50 ~G~~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs 103 (428)
++..+.+....+|++++.||.+|||+|+.+.|.|.++.+++++ +.++.+.
T Consensus 11 ~~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----v~~~~~~ 60 (175)
T 3gyk_A 11 DPNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN----VRLVYRE 60 (175)
T ss_dssp CTTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----EEEEEEE
T ss_pred CCCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC----EEEEEEe
Confidence 3445667777899999999999999999999999999988643 5555544
No 458
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.40 E-value=2e-07 Score=71.68 Aligned_cols=57 Identities=18% Similarity=0.255 Sum_probs=42.5
Q ss_pred EEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCCCc
Q 014225 65 ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIP 144 (428)
Q Consensus 65 lv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P 144 (428)
++.||++||++|+...|.|.++..++ +..|++|.+ ..+++.|+++ +|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~--------~~~vdid~~------------------------~~l~~~~g~~-vP 49 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA--------FFSVFIDDD------------------------AALESAYGLR-VP 49 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC--------EEEEECTTC------------------------HHHHHHHTTT-CS
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh--------eEEEECCCC------------------------HHHHHHhCCC-cC
Confidence 78899999999999999887653321 344555544 5677789998 99
Q ss_pred eEEEEcCCCCCCCcc
Q 014225 145 CLVVLQPYDDKDDAT 159 (428)
Q Consensus 145 ~~~lid~~~~dG~i~ 159 (428)
++++ . +|+.+
T Consensus 50 tl~~--~---~G~~v 59 (87)
T 1ttz_A 50 VLRD--P---MGREL 59 (87)
T ss_dssp EEEC--T---TCCEE
T ss_pred eEEE--E---CCEEE
Confidence 9887 4 78765
No 459
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.38 E-value=8.9e-07 Score=91.01 Aligned_cols=69 Identities=13% Similarity=0.157 Sum_probs=58.7
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchh
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 303 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 303 (428)
..++..++.||++|||+|+.+.|.|+++...+. ++.+..|+++.. .
T Consensus 115 ~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-----------~v~~~~vd~~~~-----------------------~ 160 (521)
T 1hyu_A 115 IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-----------RIKHTAIDGGTF-----------------------Q 160 (521)
T ss_dssp CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-----------TEEEEEEETTTC-----------------------H
T ss_pred cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-----------ceEEEEEechhh-----------------------H
Confidence 446788999999999999999999999887754 478888888755 6
Q ss_pred HHHHhcCcCccceEEEECCCCcEEec
Q 014225 304 ELTKYFDVQGIPCLVIIGPEGKTVTK 329 (428)
Q Consensus 304 ~~~~~~~v~~~P~~~lid~~G~i~~~ 329 (428)
+++..|+|.++|++++ +|+.+..
T Consensus 161 ~~~~~~~i~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 161 NEITERNVMGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp HHHHHTTCCSSSEEEE---TTEEEEE
T ss_pred HHHHHhCCCccCEEEE---CCEEEec
Confidence 7999999999999977 8888765
No 460
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.35 E-value=2.1e-06 Score=79.08 Aligned_cols=97 Identities=8% Similarity=0.067 Sum_probs=60.7
Q ss_pred eecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC---CCHH-HHH---------
Q 014225 218 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD---RDQT-SFE--------- 284 (428)
Q Consensus 218 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d---~~~~-~~~--------- 284 (428)
.+.+....++++|+.|+.+|||+|+++.+.+.++.+. . ++.|+.+.+. .... ...
T Consensus 89 ~i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g---------~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~ 156 (241)
T 1v58_A 89 WLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS---G---------KVQLRTLLVGVIKPESPATAAAILASKDPA 156 (241)
T ss_dssp CEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT---T---------SEEEEEEECCCSSTTHHHHHHHHHHSSSHH
T ss_pred CceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC---C---------cEEEEEEECCcCCCcHHHHHHHHHHccCHH
Confidence 3445555678999999999999999999998876553 1 4777766652 1111 111
Q ss_pred HHH---h-cCC--ccc--------cccCCcchhHHHHhcCcCccceEEEECCCCcE
Q 014225 285 SYF---G-TMP--WLA--------LPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 326 (428)
Q Consensus 285 ~~~---~-~~~--~~~--------~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 326 (428)
+++ . .+. .+. .....+....+++.+||+++|++++.|.+|++
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 157 KTWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp HHHHHHHHTTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred HHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 111 1 000 000 00011234567889999999999999888975
No 461
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.35 E-value=2.1e-07 Score=70.16 Aligned_cols=58 Identities=19% Similarity=0.271 Sum_probs=42.7
Q ss_pred EEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCCCc
Q 014225 65 ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIP 144 (428)
Q Consensus 65 lv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P 144 (428)
++.||++||++|+...|.|+++.+++ + +.+..+.+|.+.+ + ..+.+.||+.++|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~---~--~~~~~~~v~~~~~-----------------~----~~~~~~~gv~~vP 57 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS---K--YTVEIVHLGTDKA-----------------R----IAEAEKAGVKSVP 57 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT---T--EEEEEEETTTCSS-----------------T----HHHHHHHTCCEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc---C--CeEEEEEecCChh-----------------h----HHHHHHcCCCcCC
Confidence 67799999999999999998876553 3 4555555554311 1 4566889999999
Q ss_pred eEEE
Q 014225 145 CLVV 148 (428)
Q Consensus 145 ~~~l 148 (428)
++++
T Consensus 58 t~~i 61 (80)
T 2k8s_A 58 ALVI 61 (80)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9776
No 462
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.34 E-value=2.6e-06 Score=75.24 Aligned_cols=42 Identities=21% Similarity=0.281 Sum_probs=35.3
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEc
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 276 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~ 276 (428)
.++++|+.||.++||+|..+.+.+.++.+++.. ++.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK----------DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT----------TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC----------ceEEEEeCc
Confidence 578899999999999999999999988877653 477777765
No 463
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.31 E-value=1.4e-06 Score=77.21 Aligned_cols=44 Identities=20% Similarity=0.243 Sum_probs=38.6
Q ss_pred CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC
Q 014225 59 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 105 (428)
Q Consensus 59 ~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D 105 (428)
-.++++++.||++|||+|+.+.|.+.++.+++.++ +.+..+.++
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~~~~ 66 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQD---VVLKQVPIA 66 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTT---EEEEEEECC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCC---eEEEEEecc
Confidence 35899999999999999999999999999988763 888888775
No 464
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.31 E-value=1.1e-06 Score=81.09 Aligned_cols=68 Identities=10% Similarity=0.187 Sum_probs=53.0
Q ss_pred CCCEEEEEEe--cCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhh
Q 014225 60 EGKVTALYFS--ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRK 137 (428)
Q Consensus 60 ~gk~vlv~F~--a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 137 (428)
.+++|+|+|| |+||+ +.|.+.++++.+++...++.++.|++|...+ .. ...+++.
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~-----------------~~--n~~la~~ 88 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGE-----------------LE--NKALGDR 88 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTT-----------------CT--THHHHHH
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccc-----------------cc--cHHHHHH
Confidence 4679999999 99998 8999999999997611248888887765100 00 1789999
Q ss_pred cCCC--CCceEEEEc
Q 014225 138 FDIE--GIPCLVVLQ 150 (428)
Q Consensus 138 ~~v~--~~P~~~lid 150 (428)
|+|. ++||++++.
T Consensus 89 ~~V~~~~~PTl~~F~ 103 (248)
T 2c0g_A 89 YKVDDKNFPSIFLFK 103 (248)
T ss_dssp TTCCTTSCCEEEEES
T ss_pred hCCCcCCCCeEEEEe
Confidence 9999 999999986
No 465
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.29 E-value=1.8e-07 Score=88.18 Aligned_cols=72 Identities=15% Similarity=0.367 Sum_probs=50.6
Q ss_pred eecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCcccccc
Q 014225 218 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 297 (428)
Q Consensus 218 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~ 297 (428)
.+.+.+..++..+++|||+|||+|+++.|.++++.+++ . .|.+|...
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l--------------~--~Vd~d~~d----------------- 235 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV--------------P--YVECSPNG----------------- 235 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS--------------C--EEESCSSC-----------------
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc--------------C--EEEEeecC-----------------
Confidence 55555555555679999999999999999999876432 2 34444210
Q ss_pred CC-cchhHHHHhcCcCccceEEEECCCCcE
Q 014225 298 GD-PTIKELTKYFDVQGIPCLVIIGPEGKT 326 (428)
Q Consensus 298 ~~-d~~~~~~~~~~v~~~P~~~lid~~G~i 326 (428)
. +...+++++|+|+++||+++ +|+.
T Consensus 236 -~~~~~~~la~~~gI~~vPT~~i---~G~~ 261 (291)
T 3kp9_A 236 -PGTPQAQECTEAGITSYPTWII---NGRT 261 (291)
T ss_dssp -SSSCCCHHHHTTTCCSTTEEEE---TTEE
T ss_pred -chhhHHHHHHHcCCcccCeEEE---CCEE
Confidence 0 11378999999999999655 7764
No 466
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.27 E-value=3.1e-06 Score=76.32 Aligned_cols=85 Identities=21% Similarity=0.196 Sum_probs=53.7
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCC----CH---------------HHHHH
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR----DQ---------------TSFES 285 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~----~~---------------~~~~~ 285 (428)
.++++++.||.+|||+|+++.|.|.++.+ . ++.|+.+...- +. ..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~---------~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~ 151 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----L---------GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNE 151 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----T---------TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----C---------CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHH
Confidence 57899999999999999999999887543 2 36666554421 10 11222
Q ss_pred HHhcCCccc---cccCCcchhHHHHhcCcCccceEEEECCCCc
Q 014225 286 YFGTMPWLA---LPFGDPTIKELTKYFDVQGIPCLVIIGPEGK 325 (428)
Q Consensus 286 ~~~~~~~~~---~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~ 325 (428)
++.... +. .....+.+..+++.+||+++||+++ .||+
T Consensus 152 ~~~~~~-~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~ 191 (211)
T 1t3b_A 152 AEKGNL-PKEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGE 191 (211)
T ss_dssp HHTTCC-CSSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSC
T ss_pred HHcCCC-CChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCE
Confidence 222111 10 0111234567889999999999987 5676
No 467
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.21 E-value=1.4e-06 Score=66.02 Aligned_cols=61 Identities=16% Similarity=0.280 Sum_probs=45.9
Q ss_pred EEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC--CCC
Q 014225 65 ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD--IEG 142 (428)
Q Consensus 65 lv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~--v~~ 142 (428)
++.|+++|||+|+...+.|+++..+++ + +.+..++++.+.. .. ..+.+.++ +.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--~--i~~~~vdi~~~~~-----------------~~---~~l~~~~~~~~~~ 58 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--D--FQYQYVDIRAEGI-----------------TK---EDLQQKAGKPVET 58 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--S--CEEEEECHHHHTC-----------------CS---HHHHHHTCCCSCC
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--C--ceEEEEecccChH-----------------HH---HHHHHHhCCCCce
Confidence 678999999999999999999888764 3 7777776654321 11 46788888 899
Q ss_pred CceEEEEc
Q 014225 143 IPCLVVLQ 150 (428)
Q Consensus 143 ~P~~~lid 150 (428)
+|++ +++
T Consensus 59 vP~i-~~~ 65 (85)
T 1ego_A 59 VPQI-FVD 65 (85)
T ss_dssp SCEE-EET
T ss_pred eCeE-EEC
Confidence 9997 344
No 468
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.19 E-value=2.2e-06 Score=76.45 Aligned_cols=45 Identities=18% Similarity=0.292 Sum_probs=37.5
Q ss_pred cCCcEEEEEEeccCChhHHhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEEcCC
Q 014225 224 LVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDR 278 (428)
Q Consensus 224 ~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~~~~~~~~iv~is~d~ 278 (428)
..++++||.||+.|||+|..+.|.| .++.+++.+ ++.+..+.++.
T Consensus 111 ~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~----------~v~~~~~~v~~ 158 (197)
T 1un2_A 111 VAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE----------GVKMTKYHVNF 158 (197)
T ss_dssp CTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT----------TCCEEEEECSS
T ss_pred CCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC----------CCEEEEeccCc
Confidence 3468999999999999999999998 887777754 47888888864
No 469
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.17 E-value=1.1e-05 Score=70.09 Aligned_cols=52 Identities=12% Similarity=0.158 Sum_probs=42.0
Q ss_pred eecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 218 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 218 ~v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
.+.+....++++|+.|+..+||+|..+.+.+.++.++|.+. .++.++...+.
T Consensus 19 ~~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~ 70 (175)
T 1z6m_A 19 GLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKS--------GKVERIIKLFD 70 (175)
T ss_dssp SEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHT--------TSEEEEEEECC
T ss_pred CcccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhC--------CcEEEEEEeCC
Confidence 45666677899999999999999999999999998888432 25888887664
No 470
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.17 E-value=7.3e-06 Score=72.70 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=36.3
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 277 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d 277 (428)
.++++|+.||..|||+|..+.|.+.++.+++.+ ++.+..+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~----------~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD----------DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT----------TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC----------CeEEEEecCC
Confidence 478999999999999999999999988877654 3777777775
No 471
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.16 E-value=4.6e-06 Score=76.60 Aligned_cols=67 Identities=18% Similarity=0.314 Sum_probs=54.9
Q ss_pred CCCEEEEEEec--CCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC---ChHHHHHHHhcCCCceeccCChHHHHHH
Q 014225 60 EGKVTALYFSA--NWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE---DLNAFNNYRACMPWLAVPYSDLETKKAL 134 (428)
Q Consensus 60 ~gk~vlv~F~a--~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~---~~~~~~~~~~~~~~~~~~~~d~~~~~~l 134 (428)
.+++|+|.||| +||+ +.|.+.++++.+++. .++.++.|++|. +.. ..+
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~-~~v~~akVDvd~~g~~~~----------------------~~l 73 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASS-DDLLVAEVGISDYGDKLN----------------------MEL 73 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTC-TTEEEEEECCCCSSSCCS----------------------HHH
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCC-CCeEEEEEeCCcccchhh----------------------HHH
Confidence 35799999999 9998 899999999999753 248888877653 211 789
Q ss_pred HhhcCCC--CCceEEEEcCCCCCCC
Q 014225 135 NRKFDIE--GIPCLVVLQPYDDKDD 157 (428)
Q Consensus 135 ~~~~~v~--~~P~~~lid~~~~dG~ 157 (428)
++.|+|. ++||++++. +|.
T Consensus 74 ~~~~~V~~~~~PTl~~f~----~G~ 94 (240)
T 2qc7_A 74 SEKYKLDKESYPVFYLFR----DGD 94 (240)
T ss_dssp HHHTTCCGGGCSEEEEEE----TTC
T ss_pred HHHcCCCCCCCCEEEEEe----CCC
Confidence 9999999 999999997 575
No 472
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.10 E-value=1.8e-06 Score=68.06 Aligned_cols=56 Identities=18% Similarity=0.194 Sum_probs=42.2
Q ss_pred CCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCC
Q 014225 61 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 140 (428)
Q Consensus 61 gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 140 (428)
.+++++.|+++||++|+...|.|.++.+ + +.+..|++|.... ..+.+.|+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~-----~--i~~~~vdi~~~~~----------------------~el~~~~g- 64 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD-----R--FILQEVDITLPEN----------------------STWYERYK- 64 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS-----S--SEEEEEETTSSTT----------------------HHHHHHSS-
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh-----C--CeEEEEECCCcch----------------------HHHHHHHC-
Confidence 4578899999999999998888875432 2 6677777762211 67788999
Q ss_pred CCCceE
Q 014225 141 EGIPCL 146 (428)
Q Consensus 141 ~~~P~~ 146 (428)
.++|++
T Consensus 65 ~~vP~l 70 (100)
T 1wjk_A 65 FDIPVF 70 (100)
T ss_dssp SSCSEE
T ss_pred CCCCEE
Confidence 999975
No 473
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.10 E-value=8.1e-06 Score=73.52 Aligned_cols=83 Identities=16% Similarity=0.135 Sum_probs=51.2
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCC---Ch----------------HHHHHHHhcCCC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE---DL----------------NAFNNYRACMPW 120 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~---~~----------------~~~~~~~~~~~~ 120 (428)
.+|++++.||.+|||+|+++.|.|+++.+ .+ +.+..+.... .. ..+.+++...+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~~--v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~ 158 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----LG--ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLP 158 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----TT--EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----CC--cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCC
Confidence 46899999999999999999999988543 24 6666554321 11 111111111110
Q ss_pred c-eeccCChHHHHHHHhhcCCCCCceEEE
Q 014225 121 L-AVPYSDLETKKALNRKFDIEGIPCLVV 148 (428)
Q Consensus 121 ~-~~~~~d~~~~~~l~~~~~v~~~P~~~l 148 (428)
. .-.-...+....+++.+|++++|++++
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gTPt~vi 187 (211)
T 1t3b_A 159 KEVKTPNIVKKHYELGIQFGVRGTPSIVT 187 (211)
T ss_dssp SSCCCSSHHHHHHHHHHHHTCCSSCEEEC
T ss_pred ChHHHHHHHHHHHHHHHHcCCCcCCEEEE
Confidence 0 000112234478899999999999887
No 474
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.09 E-value=1.6e-05 Score=70.23 Aligned_cols=43 Identities=21% Similarity=0.243 Sum_probs=37.0
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 105 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D 105 (428)
.++++++.||..|||+|+.+.|.|.++.+++.++ +.+..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPAD---VHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTT---EEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCC---eEEEEEehh
Confidence 5899999999999999999999999999988763 777766653
No 475
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.05 E-value=8.6e-06 Score=72.05 Aligned_cols=42 Identities=19% Similarity=0.298 Sum_probs=36.6
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEec
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 104 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~ 104 (428)
.++++++.||.+|||+|..+.|.|.++.++++.+ +.+..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSD---AYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTT---EEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCc---eEEEEecc
Confidence 5789999999999999999999999999988653 77777765
No 476
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.01 E-value=9.3e-06 Score=83.36 Aligned_cols=74 Identities=12% Similarity=0.116 Sum_probs=58.0
Q ss_pred ccCCCCEEeccc--------CCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcC
Q 014225 47 LNQHGTQVKVSD--------LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACM 118 (428)
Q Consensus 47 ~~~~G~~v~l~~--------~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~ 118 (428)
....|.+..+++ ..+++.++.||++||++|+...|.++++..++. ++.+..|+.|..
T Consensus 95 ~~~~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~----~v~~~~vd~~~~----------- 159 (521)
T 1hyu_A 95 LWTGGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP----RIKHTAIDGGTF----------- 159 (521)
T ss_dssp HHHTTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT----TEEEEEEETTTC-----------
T ss_pred HhhcCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC----ceEEEEEechhh-----------
Confidence 344666554442 346789999999999999999999999988864 277777765533
Q ss_pred CCceeccCChHHHHHHHhhcCCCCCceEEE
Q 014225 119 PWLAVPYSDLETKKALNRKFDIEGIPCLVV 148 (428)
Q Consensus 119 ~~~~~~~~d~~~~~~l~~~~~v~~~P~~~l 148 (428)
..+++.|++.++|++++
T Consensus 160 -------------~~~~~~~~i~svPt~~i 176 (521)
T 1hyu_A 160 -------------QNEITERNVMGVPAVFV 176 (521)
T ss_dssp -------------HHHHHHTTCCSSSEEEE
T ss_pred -------------HHHHHHhCCCccCEEEE
Confidence 78899999999999877
No 477
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.97 E-value=4.3e-05 Score=70.20 Aligned_cols=97 Identities=9% Similarity=0.085 Sum_probs=59.5
Q ss_pred EecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC---CC-------------hHHHHHHHh-
Q 014225 54 VKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD---ED-------------LNAFNNYRA- 116 (428)
Q Consensus 54 v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D---~~-------------~~~~~~~~~- 116 (428)
+.+..-.+|++++.|+.+|||+|+++.|.+.++.+. + ++.+..+.+. .. ...+.++..
T Consensus 90 i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~----g-~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~ 164 (241)
T 1v58_A 90 LLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS----G-KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEA 164 (241)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT----T-SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHH
T ss_pred ceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC----C-cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHH
Confidence 334444678999999999999999999999887664 2 3777666542 11 111111111
Q ss_pred cCC---Ccee---c---cCChHHHHHHHhhcCCCCCceEEEEcCCCCCCCc
Q 014225 117 CMP---WLAV---P---YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDA 158 (428)
Q Consensus 117 ~~~---~~~~---~---~~d~~~~~~l~~~~~v~~~P~~~lid~~~~dG~i 158 (428)
.+. .... + ....+....+.+.+|+.++|++++.+. +|++
T Consensus 165 ~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~---~G~~ 212 (241)
T 1v58_A 165 SGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSK---ENTL 212 (241)
T ss_dssp TTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEET---TTEE
T ss_pred HhccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECC---CCCE
Confidence 111 0000 0 001123367788999999999999987 7853
No 478
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.90 E-value=3.6e-05 Score=57.55 Aligned_cols=59 Identities=12% Similarity=0.271 Sum_probs=40.9
Q ss_pred EEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHHHhc
Q 014225 230 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 309 (428)
Q Consensus 230 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 309 (428)
++.|+++|||+|++..+.|.+ . ++.+..++++.+.+. .+..+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~---------~i~~~~vdi~~~~~~--------------------~~~~~~~ 46 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------R---------GFDFEMINVDRVPEA--------------------AEALRAQ 46 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------T---------TCCCEEEETTTCHHH--------------------HHHHHHT
T ss_pred EEEEcCCCChhHHHHHHHHHH-------C---------CCCeEEEECCCCHHH--------------------HHHHHHh
Confidence 567999999999998888764 2 356677888765321 1222358
Q ss_pred CcCccceEEEECCCCcEE
Q 014225 310 DVQGIPCLVIIGPEGKTV 327 (428)
Q Consensus 310 ~v~~~P~~~lid~~G~i~ 327 (428)
++.++|+++ + +|+.+
T Consensus 47 g~~~vP~~~-~--~g~~~ 61 (81)
T 1h75_A 47 GFRQLPVVI-A--GDLSW 61 (81)
T ss_dssp TCCSSCEEE-E--TTEEE
T ss_pred CCCccCEEE-E--CCEEE
Confidence 999999984 4 56543
No 479
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.87 E-value=3.7e-06 Score=79.20 Aligned_cols=60 Identities=12% Similarity=0.349 Sum_probs=42.1
Q ss_pred CEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCC
Q 014225 62 KVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIE 141 (428)
Q Consensus 62 k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~ 141 (428)
+..+++|||+||+||++..|.++++++++ . .|.+|.+. ..+...+++++|+++
T Consensus 198 ~~~vV~F~A~WC~~Ck~l~p~le~lA~~l-------~--~Vd~d~~d------------------~~~~~~~la~~~gI~ 250 (291)
T 3kp9_A 198 QIGGTMYGAYWCPHCQDQKELFGAAFDQV-------P--YVECSPNG------------------PGTPQAQECTEAGIT 250 (291)
T ss_dssp HTTCEEEECTTCHHHHHHHHHHGGGGGGS-------C--EEESCSSC------------------SSSCCCHHHHTTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHc-------C--EEEEeecC------------------chhhHHHHHHHcCCc
Confidence 34479999999999999999999887553 1 23344210 001016889999999
Q ss_pred CCceEEE
Q 014225 142 GIPCLVV 148 (428)
Q Consensus 142 ~~P~~~l 148 (428)
++||+++
T Consensus 251 ~vPT~~i 257 (291)
T 3kp9_A 251 SYPTWII 257 (291)
T ss_dssp STTEEEE
T ss_pred ccCeEEE
Confidence 9999554
No 480
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.82 E-value=6.8e-05 Score=54.89 Aligned_cols=59 Identities=12% Similarity=0.218 Sum_probs=40.7
Q ss_pred EEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHHHhc
Q 014225 230 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 309 (428)
Q Consensus 230 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 309 (428)
++.|+++|||+|++..+.|.++ ++.+..+.++.+.+. .+..+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~----------------~i~~~~~di~~~~~~--------------------~~~~~~~ 46 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA----------------GLAYNTVDISLDDEA--------------------RDYVMAL 46 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----------------TCCCEEEETTTCHHH--------------------HHHHHHT
T ss_pred EEEEeCCCChHHHHHHHHHHHc----------------CCCcEEEECCCCHHH--------------------HHHHHHc
Confidence 5678999999999988887642 355666777755320 1122468
Q ss_pred CcCccceEEEECCCCcEE
Q 014225 310 DVQGIPCLVIIGPEGKTV 327 (428)
Q Consensus 310 ~v~~~P~~~lid~~G~i~ 327 (428)
++.++|++++ +|+.+
T Consensus 47 ~~~~vP~l~~---~g~~~ 61 (75)
T 1r7h_A 47 GYVQAPVVEV---DGEHW 61 (75)
T ss_dssp TCBCCCEEEE---TTEEE
T ss_pred CCCccCEEEE---CCeEE
Confidence 9999999873 56653
No 481
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.76 E-value=2.7e-05 Score=61.40 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=42.6
Q ss_pred EEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCH--HHHHHHHhcCCccccccCCcchhHHHH
Q 014225 230 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ--TSFESYFGTMPWLALPFGDPTIKELTK 307 (428)
Q Consensus 230 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~ 307 (428)
++.|+++|||+|++..+.|.++...+ ++ +..+.++.+. .+. ...+.+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~-----------~~--~~~vdi~~~~~~~~~------------------~~~l~~ 62 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKE-----------GL--LEFVDITATSDTNEI------------------QDYLQQ 62 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCT-----------TS--EEEEEGGGSTTHHHH------------------HHHHHH
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCC-----------Cc--cEEEEccCCCCHHHH------------------HHHHHH
Confidence 56699999999999998887543221 12 4445655431 111 145777
Q ss_pred hcCcCccceEEEECCCCcEEe
Q 014225 308 YFDVQGIPCLVIIGPEGKTVT 328 (428)
Q Consensus 308 ~~~v~~~P~~~lid~~G~i~~ 328 (428)
.+|+.++|++++ +|+.+.
T Consensus 63 ~~g~~~vP~i~~---~g~~i~ 80 (105)
T 1kte_A 63 LTGARTVPRVFI---GKECIG 80 (105)
T ss_dssp HHSCCCSCEEEE---TTEEEE
T ss_pred HhCCCCcCeEEE---CCEEEe
Confidence 889999999853 677765
No 482
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.75 E-value=7.9e-05 Score=65.54 Aligned_cols=42 Identities=17% Similarity=0.279 Sum_probs=36.0
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEec
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 104 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~ 104 (428)
.++++++.||..|||+|..+.|.+.++.+++.++ +.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~---v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKD---VRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT---EEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCc---eEEEEeCc
Confidence 6789999999999999999999999998887543 77776665
No 483
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.74 E-value=0.00013 Score=64.54 Aligned_cols=43 Identities=21% Similarity=0.347 Sum_probs=37.3
Q ss_pred CCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 105 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D 105 (428)
.++++++.||..|||+|+.+.|.+.++.+++.++ +.+..+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~---v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDD---MYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTT---EEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCC---eEEEEecCC
Confidence 4799999999999999999999999999888763 777777764
No 484
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.71 E-value=2.5e-05 Score=62.92 Aligned_cols=65 Identities=11% Similarity=0.112 Sum_probs=43.5
Q ss_pred EEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEE---EEEEEcCCCHHHHHHHHhcCCccccccCCcchhHH
Q 014225 229 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFE---VVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 305 (428)
Q Consensus 229 vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~---iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 305 (428)
.++.|+++|||+|++..+.|.++ ++. +..|.+|.+.+.. ....++
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~----------------~~~~~~~~~vdi~~~~~~~----------------~~~~~l 67 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKF----------------SFKRGAYEIVDIKEFKPEN----------------ELRDYF 67 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTS----------------CBCTTSEEEEEGGGSSSHH----------------HHHHHH
T ss_pred CEEEEEeCCChhHHHHHHHHHHc----------------CCCcCceEEEEccCCCChH----------------HHHHHH
Confidence 46779999999999988877642 233 5566666432000 001467
Q ss_pred HHhcCcCccceEEEECCCCcEEe
Q 014225 306 TKYFDVQGIPCLVIIGPEGKTVT 328 (428)
Q Consensus 306 ~~~~~v~~~P~~~lid~~G~i~~ 328 (428)
.+.+|+.++|++++ +|+.+.
T Consensus 68 ~~~~g~~~vP~v~i---~g~~ig 87 (114)
T 2hze_A 68 EQITGGKTVPRIFF---GKTSIG 87 (114)
T ss_dssp HHHHSCCSSCEEEE---TTEEEE
T ss_pred HHHhCCCCcCEEEE---CCEEEe
Confidence 78899999998754 687764
No 485
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.69 E-value=0.00022 Score=54.99 Aligned_cols=78 Identities=15% Similarity=0.265 Sum_probs=50.6
Q ss_pred EEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHHHh-
Q 014225 230 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY- 308 (428)
Q Consensus 230 ll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~- 308 (428)
|+.|+.+|||+|.+....|.+ + ++.+..++++.+.+..+ .+.+.
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~-------~---------gi~y~~idi~~d~~~~~-------------------~~~~~~ 50 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA-------N---------RIAYDEVDIEHNRAAAE-------------------FVGSVN 50 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH-------T---------TCCCEEEETTTCHHHHH-------------------HHHHHS
T ss_pred EEEEcCCCCHhHHHHHHHHHh-------c---------CCceEEEEcCCCHHHHH-------------------HHHHHc
Confidence 566789999999987776653 2 56677788887654322 22222
Q ss_pred cCcCccceEEEECCCCcEEeccccchhhcccccCCCCChHHHHHHHHHHHHHHh
Q 014225 309 FDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 362 (428)
Q Consensus 309 ~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~p~~~~~~~~L~~~l~~~~~ 362 (428)
.|..++|++++ .||.++.- ++ .++|.++|.+++.
T Consensus 51 ~G~~tVP~I~i--~Dg~~l~~---------------~~---~~el~~~L~el~g 84 (92)
T 2lqo_A 51 GGNRTVPTVKF--ADGSTLTN---------------PS---ADEVKAKLVKIAG 84 (92)
T ss_dssp SSSSCSCEEEE--TTSCEEES---------------CC---HHHHHHHHHHHHC
T ss_pred CCCCEeCEEEE--eCCEEEeC---------------CC---HHHHHHHHHHhcC
Confidence 37889998754 67777643 12 2566777776554
No 486
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.68 E-value=0.0004 Score=59.98 Aligned_cols=51 Identities=12% Similarity=0.201 Sum_probs=41.8
Q ss_pred EEecccCCCCEEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEec
Q 014225 53 QVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 104 (428)
Q Consensus 53 ~v~l~~~~gk~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~ 104 (428)
.+.+....++++++.|+..|||+|..+.|.+.++.++|.+.+ ++.++...+
T Consensus 19 ~~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLF 69 (175)
T ss_dssp SEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred CcccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeC
Confidence 356666678999999999999999999999999999984433 478887665
No 487
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.65 E-value=0.00019 Score=60.64 Aligned_cols=92 Identities=21% Similarity=0.287 Sum_probs=56.0
Q ss_pred ecccccCCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcC-----CCH-------------
Q 014225 219 VPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-----RDQ------------- 280 (428)
Q Consensus 219 v~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d-----~~~------------- 280 (428)
+.+..-.++++|+.|+.++||+|+++.+.|.++ . ++.|+.+.+- .+.
T Consensus 7 i~~~~~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~-----------~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~ 71 (147)
T 3gv1_A 7 IKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKM----T-----------DVTVYSFMMPIAGLHPDAARKAQILWCQPDR 71 (147)
T ss_dssp EEEEETTCCEEEEEEECTTCHHHHHHHHHHTTC----C-----------SEEEEEEECCCTTTCTTHHHHHHHHHTSSSH
T ss_pred eeeecCCCCEEEEEEECCCChhHHHHHHHHhhc----C-----------ceEEEEEEccccccChhHHHHHHHHHcCCCH
Confidence 334444578999999999999999999987653 1 3666655431 111
Q ss_pred -HHHHHHHhc--CCc--cccccCCcchhHHHHhcCcCccceEEEECCCCcEE
Q 014225 281 -TSFESYFGT--MPW--LALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 327 (428)
Q Consensus 281 -~~~~~~~~~--~~~--~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~ 327 (428)
..|...+.. .+- -......+.+..+++.+||+++||+++ .+|+++
T Consensus 72 ~~a~~~~~~~g~~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~i 121 (147)
T 3gv1_A 72 AKAWTDWMRKGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRTQ 121 (147)
T ss_dssp HHHHHHHHHHCCCCTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCEE
T ss_pred HHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEEe
Confidence 112222211 000 000111235678899999999999987 577753
No 488
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.64 E-value=0.00012 Score=63.64 Aligned_cols=34 Identities=21% Similarity=0.422 Sum_probs=29.6
Q ss_pred CCcEEEEEEeccCChhHHhhhHHHHHHHHHHHhh
Q 014225 225 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQN 258 (428)
Q Consensus 225 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~ 258 (428)
.++++|+.|+.-.||+|.++.+.+.++.+++.+.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~ 53 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG 53 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc
Confidence 4688999999999999999999999988887654
No 489
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.63 E-value=0.00012 Score=54.63 Aligned_cols=53 Identities=13% Similarity=0.271 Sum_probs=37.0
Q ss_pred EEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCCCc
Q 014225 65 ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIP 144 (428)
Q Consensus 65 lv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P 144 (428)
++.|+++||++|+...+.|.+ .+ +.+..+++|.+.+ . ....+.+++.++|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~~--i~~~~vdi~~~~~--------------------~-~~~~~~~g~~~vP 52 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------RG--FDFEMINVDRVPE--------------------A-AEALRAQGFRQLP 52 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TT--CCCEEEETTTCHH--------------------H-HHHHHHTTCCSSC
T ss_pred EEEEcCCCChhHHHHHHHHHH-------CC--CCeEEEECCCCHH--------------------H-HHHHHHhCCCccC
Confidence 577999999999998887765 23 5566677765533 0 1222358899999
Q ss_pred eEE
Q 014225 145 CLV 147 (428)
Q Consensus 145 ~~~ 147 (428)
+++
T Consensus 53 ~~~ 55 (81)
T 1h75_A 53 VVI 55 (81)
T ss_dssp EEE
T ss_pred EEE
Confidence 873
No 490
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.60 E-value=8.4e-05 Score=58.52 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=38.6
Q ss_pred EEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCCCc
Q 014225 65 ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIP 144 (428)
Q Consensus 65 lv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P 144 (428)
++.|+++|||+|++..+.|.++...++ + +..+++|.+.. .......+.+.+++.++|
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~----~--~~~vdi~~~~~-----------------~~~~~~~l~~~~g~~~vP 70 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG----L--LEFVDITATSD-----------------TNEIQDYLQQLTGARTVP 70 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT----S--EEEEEGGGSTT-----------------HHHHHHHHHHHHSCCCSC
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC----c--cEEEEccCCCC-----------------HHHHHHHHHHHhCCCCcC
Confidence 566999999999998888775422211 1 44455554421 011125677889999999
Q ss_pred eEE
Q 014225 145 CLV 147 (428)
Q Consensus 145 ~~~ 147 (428)
+++
T Consensus 71 ~i~ 73 (105)
T 1kte_A 71 RVF 73 (105)
T ss_dssp EEE
T ss_pred eEE
Confidence 963
No 491
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=97.59 E-value=0.00018 Score=63.20 Aligned_cols=102 Identities=16% Similarity=0.241 Sum_probs=75.5
Q ss_pred eeccccc--CCcEEEEEEe-ccCChhHHh-hhHHHHHHHHHH-HhhhhhcCCCCCCE-EEEEEEcCCCHHHHHHHHhcC-
Q 014225 218 KVPVSSL--VGKTVGLYFS-ARWCIPCEK-FMPKLLSIYQKI-KQNLVEKGDALEDF-EVVFVSTDRDQTSFESYFGTM- 290 (428)
Q Consensus 218 ~v~l~~~--~gk~vll~F~-a~wC~~C~~-~~~~l~~l~~~~-~~~~~~~~~~~~~~-~iv~is~d~~~~~~~~~~~~~- 290 (428)
++++++. +||.|||++. +...|.|.. .+|.+.+.++++ +.+ ++ +|+.|++| +.-..++|.+.+
T Consensus 59 ~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~k---------Gvd~I~ciSVN-D~FVm~AW~k~~~ 128 (199)
T 4h86_A 59 TVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEK---------EVDQVIVVTVD-NPFANQAWAKSLG 128 (199)
T ss_dssp EEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHS---------CCCEEEEEESS-CHHHHHHHHHHTT
T ss_pred eeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhc---------CCcEEEEEEcC-CHHHHHHHHHHhc
Confidence 6777774 6888888777 578999987 799998888775 655 44 78999998 444555554443
Q ss_pred --CccccccCCcchhHHHHhcCcC---------ccceEEEECCCCcEEecc
Q 014225 291 --PWLALPFGDPTIKELTKYFDVQ---------GIPCLVIIGPEGKTVTKQ 330 (428)
Q Consensus 291 --~~~~~~~~~d~~~~~~~~~~v~---------~~P~~~lid~~G~i~~~~ 330 (428)
....++++.|.+.++.+.+|+. +....+||| ||+|.+..
T Consensus 129 ~~~~~~i~~laD~~~eftkalGl~~~~~~gg~RS~Rya~IVd-DGvV~~~~ 178 (199)
T 4h86_A 129 VKDTTHIKFASDPGCAFTKSIGFELAVGDGVYWSGRWAMVVE-NGIVTYAA 178 (199)
T ss_dssp CCCCSSEEEEECGGGHHHHHTTCEEEEETTEEEECSEEEEEE-TTEEEEEE
T ss_pred ccccccccccCCcchHHHHhcCceeecCCCcceeeEEEEEEE-CCEEEEEE
Confidence 3356888889999999999872 334578886 99988764
No 492
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.56 E-value=0.00027 Score=61.97 Aligned_cols=30 Identities=23% Similarity=0.122 Sum_probs=28.2
Q ss_pred CcEEEEEEeccCChhHHhhhHHHHHHHHHH
Q 014225 226 GKTVGLYFSARWCIPCEKFMPKLLSIYQKI 255 (428)
Q Consensus 226 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~ 255 (428)
++++||.|+..|||+|.++.|.+.++.+++
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 688999999999999999999999998887
No 493
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.49 E-value=8.4e-05 Score=59.76 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=39.8
Q ss_pred EEEEEEecCCChhhhhhHHHHHHHHHHHhcCCCcEE---EEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcC
Q 014225 63 VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFE---VVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 139 (428)
Q Consensus 63 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~---ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 139 (428)
..++.|+++|||+|++..+.|.+ .+ +. +..+++|.+.+ .......+.+.++
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~-------~~--~~~~~~~~vdi~~~~~-----------------~~~~~~~l~~~~g 72 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNK-------FS--FKRGAYEIVDIKEFKP-----------------ENELRDYFEQITG 72 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTT-------SC--BCTTSEEEEEGGGSSS-----------------HHHHHHHHHHHHS
T ss_pred CCEEEEEeCCChhHHHHHHHHHH-------cC--CCcCceEEEEccCCCC-----------------hHHHHHHHHHHhC
Confidence 34677999999999998887654 23 33 55566655421 1122257888899
Q ss_pred CCCCceEE
Q 014225 140 IEGIPCLV 147 (428)
Q Consensus 140 v~~~P~~~ 147 (428)
+.++|+++
T Consensus 73 ~~~vP~v~ 80 (114)
T 2hze_A 73 GKTVPRIF 80 (114)
T ss_dssp CCSSCEEE
T ss_pred CCCcCEEE
Confidence 99999764
No 494
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.45 E-value=0.00016 Score=59.64 Aligned_cols=54 Identities=17% Similarity=0.129 Sum_probs=36.8
Q ss_pred EecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCCCceEE
Q 014225 68 FSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLV 147 (428)
Q Consensus 68 F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~ 147 (428)
|+++||++|+...+.|.++ + +.+..+.+|.+.+ .......+.+.+++.++|+++
T Consensus 32 f~~~~Cp~C~~~~~~L~~~-------~--i~~~~vdid~~~~-----------------~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 32 FSKTSCSYCTMAKKLFHDM-------N--VNYKVVELDLLEY-----------------GNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp EECSSCSHHHHHHHHHHHH-------T--CCCEEEETTTSTT-----------------HHHHHHHHHHHHSSCCSSEEE
T ss_pred EEcCCChHHHHHHHHHHHc-------C--CCcEEEECcCCcC-----------------cHHHHHHHHHHhCCCCcCEEE
Confidence 9999999999988888764 2 3344455554411 011225688889999999874
No 495
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.45 E-value=0.00027 Score=58.23 Aligned_cols=61 Identities=18% Similarity=0.288 Sum_probs=41.9
Q ss_pred EEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCCH--HHHHHHHhcCCccccccCCcchhHHHHh
Q 014225 231 LYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ--TSFESYFGTMPWLALPFGDPTIKELTKY 308 (428)
Q Consensus 231 l~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 308 (428)
+.|+++|||+|+...+.|.++ ++.+..+.+|.+. .++ ..++.+.
T Consensus 30 vvf~~~~Cp~C~~~~~~L~~~----------------~i~~~~vdid~~~~~~~~------------------~~~l~~~ 75 (130)
T 2cq9_A 30 VIFSKTSCSYCTMAKKLFHDM----------------NVNYKVVELDLLEYGNQF------------------QDALYKM 75 (130)
T ss_dssp EEEECSSCSHHHHHHHHHHHH----------------TCCCEEEETTTSTTHHHH------------------HHHHHHH
T ss_pred EEEEcCCChHHHHHHHHHHHc----------------CCCcEEEECcCCcCcHHH------------------HHHHHHH
Confidence 349999999999998888764 1334556666431 111 1357788
Q ss_pred cCcCccceEEEECCCCcEEe
Q 014225 309 FDVQGIPCLVIIGPEGKTVT 328 (428)
Q Consensus 309 ~~v~~~P~~~lid~~G~i~~ 328 (428)
+++.++|++++ +|+.+.
T Consensus 76 ~g~~~vP~l~i---~G~~ig 92 (130)
T 2cq9_A 76 TGERTVPRIFV---NGTFIG 92 (130)
T ss_dssp HSSCCSSEEEE---TTEEEE
T ss_pred hCCCCcCEEEE---CCEEEc
Confidence 99999999853 677664
No 496
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.45 E-value=0.0003 Score=59.28 Aligned_cols=61 Identities=18% Similarity=0.253 Sum_probs=41.2
Q ss_pred EEEeccCChhHHhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEEcCCC--HHHHHHHHhcCCccccccCCcchhHHHHh
Q 014225 231 LYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD--QTSFESYFGTMPWLALPFGDPTIKELTKY 308 (428)
Q Consensus 231 l~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~~~~~~~~~iv~is~d~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 308 (428)
+.|+++|||+|+...+.|.++. +.+..+.+|.+ ..++ ..++.+.
T Consensus 52 vvf~~~~Cp~C~~~k~~L~~~~----------------i~~~~vdId~~~~~~~~------------------~~~L~~~ 97 (146)
T 2ht9_A 52 VIFSKTSCSYCTMAKKLFHDMN----------------VNYKVVELDLLEYGNQF------------------QDALYKM 97 (146)
T ss_dssp EEEECTTCHHHHHHHHHHHHHT----------------CCCEEEEGGGCTTHHHH------------------HHHHHHH
T ss_pred EEEECCCChhHHHHHHHHHHcC----------------CCeEEEECccCcCCHHH------------------HHHHHHH
Confidence 3499999999999988887542 23444555533 1111 1357788
Q ss_pred cCcCccceEEEECCCCcEEe
Q 014225 309 FDVQGIPCLVIIGPEGKTVT 328 (428)
Q Consensus 309 ~~v~~~P~~~lid~~G~i~~ 328 (428)
+|+.++|++++ +|+.+.
T Consensus 98 ~g~~tvP~ifi---~G~~ig 114 (146)
T 2ht9_A 98 TGERTVPRIFV---NGTFIG 114 (146)
T ss_dssp HSCCCSCEEEE---TTEEEE
T ss_pred hCCCCcCeEEE---CCEEEe
Confidence 99999999853 677764
No 497
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.42 E-value=4.2e-05 Score=68.05 Aligned_cols=45 Identities=22% Similarity=0.293 Sum_probs=38.0
Q ss_pred CCCEEEEEEecCCChhhhhhHHHH---HHHHHHHhcCCCcEEEEEEecCCC
Q 014225 60 EGKVTALYFSANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDED 107 (428)
Q Consensus 60 ~gk~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~ii~vs~D~~ 107 (428)
.++++||.||+.|||||+.+.|.| .++.++++++ +.+..+.++..
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~---v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEG---VKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTT---CCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCC---CEEEEeccCcC
Confidence 478999999999999999999998 8888888653 77777777653
No 498
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.42 E-value=0.001 Score=52.24 Aligned_cols=23 Identities=17% Similarity=0.340 Sum_probs=19.1
Q ss_pred EEEEEeccCChhHHhhhHHHHHH
Q 014225 229 VGLYFSARWCIPCEKFMPKLLSI 251 (428)
Q Consensus 229 vll~F~a~wC~~C~~~~~~l~~l 251 (428)
.++.|+++|||+|++..+.|.++
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCchHHHHHHHHHHc
Confidence 45668999999999999888753
No 499
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.42 E-value=0.0052 Score=53.42 Aligned_cols=113 Identities=12% Similarity=0.155 Sum_probs=67.6
Q ss_pred HhhhhccCCCCcccCCCCCceeccc----ccCCcEEEEEEeccCChhHHhhhHHH---HHHHHHHHhhhhhcCCCCCCEE
Q 014225 198 LINLLTNHDRGYLLGHPPDEKVPVS----SLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFE 270 (428)
Q Consensus 198 ~~~~~g~~~p~f~l~~~g~~~v~l~----~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~~~~~~~~~ 270 (428)
.....|...|.|--..-.+ .+..+ .-.+|+++|+++++||+.|..+...+ .++.+-++. ++.
T Consensus 24 f~~~yg~~~p~F~~gs~~~-Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~----------nfV 92 (178)
T 2ec4_A 24 FSSRYGDCHPVFFIGSLEA-AFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ----------NFI 92 (178)
T ss_dssp HHHHHCSCCCCCCCSCHHH-HHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH----------TEE
T ss_pred HHHHhCCCCCCeeeCCHHH-HHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc----------CEE
Confidence 4445577888886322222 34444 45689999999999999999877543 334444554 466
Q ss_pred EEEEEcCCCHHHHHHHHhcCCccccccCCcchhHHH---HhcCcCccceEEEECCCC---cEEec
Q 014225 271 VVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELT---KYFDVQGIPCLVIIGPEG---KTVTK 329 (428)
Q Consensus 271 iv~is~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~v~~~P~~~lid~~G---~i~~~ 329 (428)
+.+.+++.+ +....++.... -.+ ...++ +.|++.++|++++|++.| +++.+
T Consensus 93 ~w~~dv~~~-e~~~~~~~~~~---~~~----g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~ 149 (178)
T 2ec4_A 93 TWAWDLTKD-SNRARFLTMCN---RHF----GSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNV 149 (178)
T ss_dssp EEEEECCSH-HHHHHHHHHHH---HHT----CHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEE
T ss_pred EEEEeCCCc-hhhhhhhhhhh---hhh----HHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEE
Confidence 777777643 22222211100 000 02333 448999999999998774 55655
No 500
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.41 E-value=0.00019 Score=60.58 Aligned_cols=54 Identities=17% Similarity=0.129 Sum_probs=36.7
Q ss_pred EecCCChhhhhhHHHHHHHHHHHhcCCCcEEEEEEecCCChHHHHHHHhcCCCceeccCChHHHHHHHhhcCCCCCceEE
Q 014225 68 FSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLV 147 (428)
Q Consensus 68 F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~ii~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~ 147 (428)
|+++|||+|+...+.|.++ + +.+..+++|.+.+ .......+.+.+++.++|+++
T Consensus 54 f~~~~Cp~C~~~k~~L~~~-------~--i~~~~vdId~~~~-----------------~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 54 FSKTSCSYCTMAKKLFHDM-------N--VNYKVVELDLLEY-----------------GNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp EECTTCHHHHHHHHHHHHH-------T--CCCEEEEGGGCTT-----------------HHHHHHHHHHHHSCCCSCEEE
T ss_pred EECCCChhHHHHHHHHHHc-------C--CCeEEEECccCcC-----------------CHHHHHHHHHHhCCCCcCeEE
Confidence 9999999999988887764 2 2334455554411 111225688889999999874
Done!