Query 014226
Match_columns 428
No_of_seqs 200 out of 1634
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 07:44:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fky_A Glutamine synthetase; b 100.0 3.4E-92 1.2E-96 717.2 30.0 345 62-413 10-358 (370)
2 2d3a_A Glutamine synthetase; l 100.0 6.6E-90 2.3E-94 697.4 30.5 338 75-412 15-356 (356)
3 2ojw_A Glutamine synthetase; a 100.0 2.3E-89 8E-94 699.4 30.4 346 59-412 28-383 (384)
4 3ng0_A Glutamine synthetase; G 100.0 1.9E-89 6.6E-94 717.0 26.7 339 60-410 4-385 (473)
5 3qaj_A Glutamine synthetase; A 100.0 1.4E-90 4.8E-95 719.9 16.8 333 60-410 5-357 (444)
6 4hpp_A Probable glutamine synt 100.0 1.6E-86 5.5E-91 688.9 21.7 316 74-410 5-356 (443)
7 4acf_A Glutamine synthetase 1; 100.0 1.2E-85 4.2E-90 691.0 28.2 339 60-410 13-398 (486)
8 1f52_A Glutamine synthetase; A 100.0 1.4E-85 4.8E-90 687.6 27.4 337 61-410 2-381 (468)
9 2j9i_A Glutamate-ammonia ligas 100.0 7.4E-77 2.5E-81 613.9 10.3 315 61-410 2-343 (421)
10 3o6x_A Glutamine synthetase; t 100.0 3.2E-59 1.1E-63 499.4 12.1 281 110-410 127-499 (729)
11 1r8g_A Hypothetical protein YB 98.2 2.2E-05 7.6E-10 79.2 15.9 129 179-344 11-168 (372)
12 2gwd_A Glutamate cysteine liga 98.0 5.9E-05 2E-09 78.2 13.5 151 162-344 17-213 (449)
13 3ln6_A Glutathione biosynthesi 95.3 0.53 1.8E-05 51.6 17.8 99 244-343 54-194 (750)
14 3ln7_A Glutathione biosynthesi 82.2 3.9 0.00013 44.8 9.2 97 244-342 53-194 (757)
15 1nxi_A Conserved hypothetical 80.2 5.9 0.0002 33.8 7.8 90 167-287 22-114 (132)
16 2fao_A Probable ATP-dependent 78.6 12 0.00042 36.5 10.4 126 235-376 111-243 (309)
17 2iru_A Putative DNA ligase-lik 66.3 12 0.0004 36.5 7.0 126 235-376 105-245 (303)
18 1va6_A Glutamate--cysteine lig 64.8 15 0.00053 38.3 8.0 17 178-194 20-36 (518)
19 1zpv_A ACT domain protein; str 54.3 7.4 0.00025 29.8 2.7 65 227-293 18-82 (91)
20 3nzt_A Glutamate--cysteine lig 47.1 51 0.0018 34.4 8.3 18 177-194 30-47 (525)
21 3ose_A Serine/threonine-protei 30.2 54 0.0018 27.2 4.4 62 225-286 40-120 (120)
22 1v5s_A MAP/microtubule affinit 28.1 1.1E+02 0.0039 25.6 6.0 62 225-286 40-120 (126)
23 2nyi_A Unknown protein; protei 22.5 71 0.0024 28.3 4.0 67 225-294 104-176 (195)
24 1u8s_A Glycine cleavage system 20.7 3.5E+02 0.012 23.3 8.2 65 226-293 18-82 (192)
25 3tc3_A UV damage endonuclease; 20.7 1.2E+02 0.0043 29.3 5.5 66 225-297 60-127 (310)
No 1
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-92 Score=717.18 Aligned_cols=345 Identities=53% Similarity=0.954 Sum_probs=287.6
Q ss_pred HHHHHHHhcCCCCCCCEEEEEEEeecCCCCceeeccccCCCCC----CCCcccccCCCCCCCCCCCCceeeeeeeeeecC
Q 014226 62 NRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKPVEHPS----ELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDP 137 (428)
Q Consensus 62 ~~~~~~l~~~~~p~~~~v~~~~~d~~G~G~~lR~K~vp~~~~~----~l~~~~fdgs~~g~~~~~~~D~~l~PD~~~~~P 137 (428)
..+++|++..- ..+++|++.|+|++|. +|||.++++.+. +++.|+||||++|+.+++++|++|+||+++++|
T Consensus 10 ~~~~~~~~l~~-~~i~~v~~~~~D~~G~---lR~K~~~~~~~~~~~~~~~~~~fDGss~g~~~~~~sD~~l~Pdt~~~~P 85 (370)
T 3fky_A 10 QILQKYLELDQ-RGRIIAEYVWIDGTGN---LRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAYYPDP 85 (370)
T ss_dssp ------------CCCEEEEEEEECSSSC---EEEEEEEESSCCCSGGGSCCEEECGGGTTSSCCCC--EEEEEEEEEECT
T ss_pred HHHHHHhCccc-CCeEEEEEEEEcCCCC---eEEEEEECccccchHHhCCccccCCcccccccCCCCCeeEeeeEEEEcC
Confidence 44566655531 1455666555555554 999999998774 345689999999999889999999999999999
Q ss_pred CCCCCeEEEEEEEecCCCCCCCCCHHHHHHHHHHhhhcccccceEeeeeeEEEecCCCCCCCCCCCCCCCCCCCCccccc
Q 014226 138 FRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGA 217 (428)
Q Consensus 138 w~~~~~a~Vlcd~~~~dG~P~~~~PR~~Lkr~l~~l~~~G~~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (428)
|+++++++|+||++++||+|++.|||++|||++++++ |+++++|+|+|||||+.+. .+.+|+.++.|.++++||+..
T Consensus 86 w~~~~~a~vlcd~~~~dG~P~~~~pR~iLkr~~~~~~--g~~~~~G~E~EF~Lf~~~~-~~~~~p~~~~p~~~g~yy~~~ 162 (370)
T 3fky_A 86 FRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHK--DEEIWFGLEQEYTLFDMYD-DVYGWPKGGYPAPQGPYYCGV 162 (370)
T ss_dssp TTCTTCEEEEEEEECTTSSBCTTCCHHHHHHHHHHTG--GGCCEEEEEEEEEEECTTS-SBTTCCTTSBCSCSSSCTTCC
T ss_pred CCCCCeEEEEEEEEcCCCCCCCCCHHHHHHHHHHHhc--CCCceEEeeeEEEEEccCC-CcccCCCCCccCCCCcccccc
Confidence 9997799999999999999999999999999999877 9999999999999998763 355677667888999999887
Q ss_pred CcChhhHHHHHHHHHHHHHHcCCceeeccCCCCCCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeecccCCCC
Q 014226 218 GADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEG 297 (428)
Q Consensus 218 ~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFmpKP~~~ 297 (428)
+.+..+.++++++|+++|+++||+||++|||+|||||||++.|+++|++||++++||++||+||++||++|||||||+.+
T Consensus 163 ~~~~~~~~~i~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~K~~vk~vA~~~G~~ATFmpKP~~g 242 (370)
T 3fky_A 163 GAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKG 242 (370)
T ss_dssp STTTCSCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHTTTCEEECCSCSSSS
T ss_pred chhhHHHHHHHHHHHHHHHHcCCCeeeeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCcEEEEcccccCC
Confidence 76666679999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCCCceeeeccccccccCCCchHHHHHHHHHHHHhHHHHhhcccccccccCCCCCCCCCCCceeeccCCCcceeeeccCC
Q 014226 298 DWNGAGCHTNYSTKSMREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRET 377 (428)
Q Consensus 298 ~~~GsG~H~H~SL~~~~~~~g~~~~~~fiaGl~L~h~~al~a~~~nSYkRl~p~~~ap~~~~~~WG~~NRsa~iRvp~~~ 377 (428)
+++|||||+|+|||+.++++|.+.+++|++||+++|+++|+||+.||||||+|++|||++.+++||++||+++||||...
T Consensus 243 d~~GSG~H~H~Sl~~~~~~~g~~~~~~~i~gl~~~h~~~i~a~~~nSYkRL~~~~eap~~~~~sWG~~NRsa~iRIp~~~ 322 (370)
T 3fky_A 243 DWNGAGCHANVSTKEMRQPGGTKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGSSIRIPRSV 322 (370)
T ss_dssp SSCCCBEEEEEECHHHHSSSTHHHHHHHHHHHHHTHHHHHHSSCTTGGGC--------CCSCCCEEESCTTSSEEECHHH
T ss_pred CCCcccceeeeccccccCCCCHHHHHHHHHHHHHHhHHHHHHHccchhhhcCCCccCCCcccceEecCCCceeEEecCCC
Confidence 36999999999999865567788899999999349999999999999999999999998556899999999999999764
Q ss_pred CCCCccEEEecCCCCCCCHHHHHHHHHHHhhcCCCC
Q 014226 378 EKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 413 (428)
Q Consensus 378 ~~~~~~riE~R~~da~aNPYLalAaiLaAGl~G~~~ 413 (428)
...+++|||+|+||++|||||++|+||+|||+|++.
T Consensus 323 ~~~~~~riE~R~pda~aNPYLa~Aailaagl~Gi~~ 358 (370)
T 3fky_A 323 AKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 (370)
T ss_dssp HHHTCCCEEECCCBTTCCHHHHHHHHHHHHHCCBTT
T ss_pred CCCCCCEEEECCCCCCCCHHHHHHHHHHHHhcCccc
Confidence 322246999999999999999999999999999964
No 2
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=100.00 E-value=6.6e-90 Score=697.36 Aligned_cols=338 Identities=79% Similarity=1.406 Sum_probs=297.5
Q ss_pred CCCEEEEEEEeecCCCCceeeccccCCCCCC----CCcccccCCCCCCCCCCCCceeeeeeeeeecCCCCCCeEEEEEEE
Q 014226 75 YTDKIIAEYIWIGGTGIDMRSKSKPVEHPSE----LPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDT 150 (428)
Q Consensus 75 ~~~~v~~~~~d~~G~G~~lR~K~vp~~~~~~----l~~~~fdgs~~g~~~~~~~D~~l~PD~~~~~Pw~~~~~a~Vlcd~ 150 (428)
+.+.+.++++|+|+.|..+|||.+|++.+.+ ++.++||||++++..+.++|++|+||+++++||+++++++|+||+
T Consensus 15 ~~~~~~v~~~~vD~~g~~~r~k~~~~~~~~~~~~~~~g~~fdgss~~~~~~~~sD~~l~PDt~~~~P~~~~~~a~v~cd~ 94 (356)
T 2d3a_A 15 TTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDC 94 (356)
T ss_dssp TCSCEEEEEEEECTTSSCEEEEEEEESSCCCCGGGSCCEEEEGGGTTSSCSSSCEEEEEEEEEEECTTTCTTCEEEEEEE
T ss_pred CCCeEEEEEEEEcCCCCcccceEEECCcchhhHhhcCcceecccccccccCcCCcEEEEEEEEEECCcCCCCceEEEEEE
Confidence 3445555566666655469999999987654 345789999999888789999999999899999986799999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHhhhcccccceEeeeeeEEEecCCCCCCCCCCCCCCCCCCCCcccccCcChhhHHHHHHH
Q 014226 151 YTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADA 230 (428)
Q Consensus 151 ~~~dG~P~~~~PR~~Lkr~l~~l~~~G~~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 230 (428)
+++||+|++.|||++|||+++++++.|+++++|+|+|||||+++.+.+.+|+..+.|.++++||+..+.+..+.++++++
T Consensus 95 ~~~dG~P~~~~pR~iLkr~~~~~~~~g~~~~~G~E~EF~lf~~~~~~~~~~~~~g~p~~~g~y~~~~~~~~~~~~~~~~~ 174 (356)
T 2d3a_A 95 YTPAGEPIPTNKRYSAAKIFSSPEVAAEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDA 174 (356)
T ss_dssp ECTTSCBCTTCCHHHHHHHHHSHHHHHHCCEEEEEEEEEEEETTTCCBTTSCTTSBCSCSSSCTTCCSTTTCCCHHHHHH
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHHhcCCeeEEecceEEEEEecCCCcccccccCCCCCCCCCcCcCcccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999976444445554456778899998888776667999999
Q ss_pred HHHHHHHcCCceeeccCCCCCCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeecccCCCCCCCCceeeecccc
Q 014226 231 HYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYST 310 (428)
Q Consensus 231 l~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFmpKP~~~~~~GsG~H~H~SL 310 (428)
|+++|+++||+||++|||+|||||||++.|+++|++||++++||++||+||++||++|||||||+.++++|||||+|+||
T Consensus 175 i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~d~~GSG~H~H~Sl 254 (356)
T 2d3a_A 175 HYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYST 254 (356)
T ss_dssp HHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHHHTEEEECCSCSSCSSSCCCBEEEEEEC
T ss_pred HHHHHHHCCCCEEEeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEECCCccCCCCCCCcceEEech
Confidence 99999999999999999999999999999999999999999999999999999999999999999632699999999999
Q ss_pred ccccCCCchHHHHHHHHHHHHhHHHHhhcccccccccCCCCCCCCCCCceeeccCCCcceeeeccCCCCCCccEEEecCC
Q 014226 311 KSMREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRP 390 (428)
Q Consensus 311 ~~~~~~~g~~~~~~fiaGl~L~h~~al~a~~~nSYkRl~p~~~ap~~~~~~WG~~NRsa~iRvp~~~~~~~~~riE~R~~ 390 (428)
++.++++|.|.|..++.+++|+|+++++||+.||||||+|++|||++.+++||.+||+++||||.....++++|||+|+|
T Consensus 255 ~~~~~~~g~~~f~~~~~~l~l~h~~~l~a~~~nSYkRL~pg~eap~~~~~swG~~NRsa~iRIp~~~~~~~~~riE~R~p 334 (356)
T 2d3a_A 255 ESMRKEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASVRVGRETEQNGKGYFEDRRP 334 (356)
T ss_dssp TTTSSTTHHHHHHHHHHHHHHTHHHHHTTSCTTHHHHCSSSSSCCCTTCCCEESSCTTSSEECCHHHHHTTCCCEEECCC
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHhHccChHHHccCCccCCCcceeEEeccCCeeeEEEccCCCCCCCCEEEEcCC
Confidence 87543457888988888877999999999999999999999999987789999999999999997532224679999999
Q ss_pred CCCCCHHHHHHHHHHHhhcCCC
Q 014226 391 ASNMDPYVVTSLLAETTILWEP 412 (428)
Q Consensus 391 da~aNPYLalAaiLaAGl~G~~ 412 (428)
|++|||||++||+|+||+++.|
T Consensus 335 d~~aNPYLa~Aailaagl~~~~ 356 (356)
T 2d3a_A 335 ASNMDPYVVTSMIAETTIVWKP 356 (356)
T ss_dssp BTTCCHHHHHHHHHHHHTTCC-
T ss_pred CCCCCHHHHHHHHHHHhcCCCC
Confidence 9999999999999999998865
No 3
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A
Probab=100.00 E-value=2.3e-89 Score=699.37 Aligned_cols=346 Identities=50% Similarity=0.941 Sum_probs=302.0
Q ss_pred hHHHHHHHHHhcCCCC-CCCEEEEEEEeecC-CCCceeeccccCCCCCCC----CcccccCCCCCCCCCCCCceeeeeee
Q 014226 59 STVNRLEDLLNLDITP-YTDKIIAEYIWIGG-TGIDMRSKSKPVEHPSEL----PKWNYDGSSTGQAPGEDSEVILYPQA 132 (428)
Q Consensus 59 ~~~~~~~~~l~~~~~p-~~~~v~~~~~d~~G-~G~~lR~K~vp~~~~~~l----~~~~fdgs~~g~~~~~~~D~~l~PD~ 132 (428)
.+.+.+++||+.+ + .+.+|++.++|++| . +|+|.+|++++.+. +.++||||++++...+++|++|+||+
T Consensus 28 ~~~~~l~~~l~~~--~~~~~~v~~~~~D~~G~~---~R~K~ip~~~~~~~~~~~p~~~~dgss~~~~~~~~sD~~l~PDt 102 (384)
T 2ojw_A 28 LNKGIKQVYMSLP--QGEKVQAMYIWIDGTGEG---LRCKTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAA 102 (384)
T ss_dssp SCHHHHHHHHTSC--CCSCEEEEEEEECTTSSC---EEEEEEEESSCCSSGGGSCCEEEEGGGTTSSBTTBCEEEEEEEE
T ss_pred CCHHHHHHHHhCC--CCCcEEEEEEEECCCCCe---eeEEEEEHHHhhhhHhhCccccccCcccccccCCCCcEEEEeeE
Confidence 4568899999997 4 46777778887887 6 99999999988653 45789999998877789999999999
Q ss_pred eeecCCCCCCeEEEEEEEecCCCCCCCCCHHHHHHHHHHhhhcccccceEeeeeeEEEecCCCCCCCCCCCCCCCCCCCC
Q 014226 133 IFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGP 212 (428)
Q Consensus 133 ~~~~Pw~~~~~a~Vlcd~~~~dG~P~~~~PR~~Lkr~l~~l~~~G~~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~~ 212 (428)
++++||+++++++|+||++++||+|++.|||++|||++++++ |+++++|+|+|||||+++.. +.+|+..+.|.++++
T Consensus 103 ~~~~Pw~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~--g~~~~~G~E~EF~Lf~~~~~-~~~~~~~g~p~~~g~ 179 (384)
T 2ojw_A 103 MFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVS--NQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGP 179 (384)
T ss_dssp EEECTTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHHTG--GGCCEEEEEEEEEEEC-CCS-BTTCCTTSCCSCSSS
T ss_pred EEECCCCCCCeEEEEEEEECCCCCCCCcCHHHHHHHHHHHHh--CCEEEEEeeeEEEEEccCCC-cccccCCCccCCCCC
Confidence 899999986699999999999999999999999999999997 89999999999999987643 335555556778899
Q ss_pred cccccCcChhhHHHHHHHHHHHHHHcCCceeeccCCCCCCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeecc
Q 014226 213 YYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDP 292 (428)
Q Consensus 213 ~~~~~~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFmp 292 (428)
||+..+.+..+.++++++|+++|+++||+||++|+|+|||||||++.|+++|++||++++||++||+||++||++|||||
T Consensus 180 y~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~Gl~aTFmp 259 (384)
T 2ojw_A 180 YYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDP 259 (384)
T ss_dssp CTTCCSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHTCEEECCS
T ss_pred CCcccccchHHHHHHHHHHHHHHHHCCCCeEeeecCCCCcceEEEcCCCcHHHHHHHHHHHHHHHHHHHHHhCCEEEEec
Confidence 99887766556789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCceeeeccccccccCCCchHHHHHHHHHHHHhHHHHhhcc----cccccccCCCCCCCCCCCceeeccCCCc
Q 014226 293 KPIEGDWNGAGCHTNYSTKSMREEGGYETIKKAILNLSLRHKEHISAY----GEGNERRLTGKHETASIDSFSWGVANRG 368 (428)
Q Consensus 293 KP~~~~~~GsG~H~H~SL~~~~~~~g~~~~~~fiaGl~L~h~~al~a~----~~nSYkRl~p~~~ap~~~~~~WG~~NRs 368 (428)
||+.++++|||||+|+||++.++++|.|.|+++++|++++|++++++| +.||||||+|++|||++++++||++||+
T Consensus 260 KP~~~d~~GSG~H~H~Sl~~~~~~~g~n~f~~~~~gl~~~h~~~i~a~~p~~~~nsykRL~pg~ea~~~~~~sWG~~NRs 339 (384)
T 2ojw_A 260 KPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRS 339 (384)
T ss_dssp CSSCSSSCCCBEEEEEECHHHHSTTTHHHHHHHHHHHHTCHHHHHHHSSTTTTTTGGGTCC-----CCTTCCCEEETCTT
T ss_pred cccCCCCCCCeeeEEeehhhhcCCCchhHHHHHHHHHHHHHHHHheEeccCCCCCchhhccCCcccCCCceEEeecccCC
Confidence 999764599999999999864334588999999999989999999999 4699999999999998889999999999
Q ss_pred ceeeeccCCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcCCC
Q 014226 369 CSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 412 (428)
Q Consensus 369 a~iRvp~~~~~~~~~riE~R~~da~aNPYLalAaiLaAGl~G~~ 412 (428)
++||||.....++++|||+|+||++|||||++||+|+|||++.+
T Consensus 340 a~iRIp~~~~~~~~~riE~R~pd~~aNPYLa~Aailaagl~~~~ 383 (384)
T 2ojw_A 340 ASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNET 383 (384)
T ss_dssp SSEEECHHHHHHTCSCEEECCCBTTCCHHHHHHHHHHHHTSCCC
T ss_pred ceEEeecCCCCCCCCEEEEcCCCCCCCHHHHHHHHHHHhcCCCC
Confidence 99999975322235799999999999999999999999998865
No 4
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP}
Probab=100.00 E-value=1.9e-89 Score=717.00 Aligned_cols=339 Identities=23% Similarity=0.304 Sum_probs=299.1
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEEEEeecCCCCceeeccccCCCCCC-CCc--ccccCCCC-CCCCCCCCceeeeeee--e
Q 014226 60 TVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKPVEHPSE-LPK--WNYDGSST-GQAPGEDSEVILYPQA--I 133 (428)
Q Consensus 60 ~~~~~~~~l~~~~~p~~~~v~~~~~d~~G~G~~lR~K~vp~~~~~~-l~~--~~fdgs~~-g~~~~~~~D~~l~PD~--~ 133 (428)
+.+++.++++++ .|++|++.|+|++|+ +|+|.||+++|.+ +.. ++||||++ ||..++++|++|+||+ +
T Consensus 4 ~~~~~~~~~~~~---~i~~V~l~f~D~~G~---~r~k~ip~~~~~~~~~~~G~~fdgss~~g~~~~~~sD~~l~PD~~T~ 77 (473)
T 3ng0_A 4 TPQEVLKWIQDE---NIKIIDLKFIDTPGI---WQHCSFYYDQLDENSFTEGIPFDGSSIRGWKAINESDMCMVPDPNTA 77 (473)
T ss_dssp CHHHHHHHHHHT---TCCEEEEEEECSSSC---EEEEEEEGGGCCGGGGTTCEEEETTSSTTSCCGGGCEEEEEECGGGC
T ss_pred CHHHHHHHHHhC---CCCEEEEEEECCCCC---EEEEEEeHHHHHHHHHhCCCccccccccccccCCCCcEEEEeecCcc
Confidence 357788999986 899999999999999 9999999999977 543 78999999 8988789999999997 8
Q ss_pred eecCCCCCCeEEEEEEEecC-CCCCCCCCHHHHHHHHHHhhhcccc--cceEeeeeeEEEecCCC-------------CC
Q 014226 134 FKDPFRGGNNILVICDTYTP-AGEPIPTNKRHRAAEIFSNSKVSAE--VPWFGIEQEYTLLQQNV-------------KW 197 (428)
Q Consensus 134 ~~~Pw~~~~~a~Vlcd~~~~-dG~P~~~~PR~~Lkr~l~~l~~~G~--~~~~g~E~EF~L~~~~~-------------~~ 197 (428)
+++||.++++++|+||++++ ||+|++.|||++|||+++++++.|+ ++++|+|+|||||+... ..
T Consensus 78 ~~~Pw~~~~~a~v~cd~~~~~~g~p~~~~pR~iLkr~~~~~~~~G~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~ 157 (473)
T 3ng0_A 78 TIDPFCKEPTLSMICSIKEPRTGEWYNRDPRTIAAKAAEYLRGTGIADTVYFGPEAEFFLFDDIRFGQTENSSYYFADSV 157 (473)
T ss_dssp EECTTCSSCEEEEEEEEECTTTSSBCTTCHHHHHHHHHHHHHHHTSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECT
T ss_pred EECCcCCCCcEEEEEEEeECCCCCCCCCChHHHHHHHHHHHHHcCCCcceEEEeeeEEEEEeeccccccccccccccccc
Confidence 99999986799999999998 9999999999999999999998766 89999999999998521 00
Q ss_pred CCCCCC---------CCCCCCCCCcccccCcChhhHHHHHHHHHHHHHHcCCceeeccCCCC-CCcEEEEeCCCcHHHHh
Q 014226 198 PLGWPV---------GAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVM-PGQWEYQVGPSVGIDAG 267 (428)
Q Consensus 198 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h~E~g-pGQ~Ei~l~~~~~l~aA 267 (428)
+.+|+. ++.+.++++||+..+.+. ..+++++|+++|+++||+||++|||+| ||||||++.|+++|++|
T Consensus 158 ~~~~~~~~~~~~~~~g~~~~~~~~y~~~~~~d~--~~~~~~~i~~~l~~~Gi~ve~~h~E~~~pGQ~Ei~~~~~~~l~aA 235 (473)
T 3ng0_A 158 EGRWNTGREEEGGNLGYKPGYKQGYFPVAPTDT--AQDIRTEMLLTMAAFGVPIEKHHHEVASGGQNELGIKFDKLVNSA 235 (473)
T ss_dssp TCGGGTTCCCTTCCCCCCCCTTCCSSCCTTTCC--CHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHH
T ss_pred ccccccccccccCCCCcccCCCccccccCccch--hHHHHHHHHHHHHHCCCCeEEeecCcCCCCceEEEccCCCHHHHH
Confidence 111211 234566788988887775 478888889999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCeEeecccCCCCCCCCceeeecccccccc-----CC--Cch-HHHHHHHHHHHHhHHHHhhc
Q 014226 268 DHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMR-----EE--GGY-ETIKKAILNLSLRHKEHISA 339 (428)
Q Consensus 268 D~~~~~K~~ik~vA~~hGl~ATFmpKP~~~~~~GsG~H~H~SL~~~~-----~~--~g~-~~~~~fiaGl~L~h~~al~a 339 (428)
|++++||++||+||++||++|||||||+.++ +|||||+|+|||+.. ++ .|+ ...++||||| |+|+++++|
T Consensus 236 D~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~-~GSG~H~H~Sl~~~g~n~F~~~~~~~lS~~~~~fiaGl-L~h~~~l~a 313 (473)
T 3ng0_A 236 DNLMIYKYVIKNVAKKYGKTVTFMPKPIFND-NGSGMHVHQSLWKDGQPLFAGDKYAGFSQMGLWYIGGI-LKHAPALLA 313 (473)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEECCSCSSTTS-CCCCEEEEEEEEETTEETTBSSSGGGBCHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCEEEEcCcccCCC-CCCeeEEEEeeccCCccccCCCCccchhHHHHHHHHHH-HHHHHHHHH
Confidence 9999999999999999999999999999995 999999999998631 11 233 3458999999 999999999
Q ss_pred ccc---cccccCCCCCCCCCCCceeeccCCCcceeeeccCCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcC
Q 014226 340 YGE---GNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILW 410 (428)
Q Consensus 340 ~~~---nSYkRl~p~~~ap~~~~~~WG~~NRsa~iRvp~~~~~~~~~riE~R~~da~aNPYLalAaiLaAGl~G 410 (428)
|++ ||||||+|++|||+ +++||.+||+++||||.....++++|||+|+||++|||||++||+|+|||+|
T Consensus 314 ~~~Pt~NSYkRL~pg~~AP~--~~~Wg~~NRsa~iRip~~~~~~~~~RiE~R~pd~~aNPYLa~Aa~LaAGldG 385 (473)
T 3ng0_A 314 FTNPTTNSYKRLVPGFEAPV--NLAYSQGNRSASVRIPLSGGNPKAKRLEFRCPDATSNPYLAFAAMLCAGIDG 385 (473)
T ss_dssp HHSCSTTHHHHBBTTTBCCC--BCCEEESCTTSSEEECCCSSCGGGCCEEECSCCTTSCHHHHHHHHHHHHHHH
T ss_pred HhCCCcchhhcccCCCcCcc--ceeeeccCCcCceeeeccCCCCCcceEEeecCCCCCCHHHHHHHHHHHHHHH
Confidence 985 99999999999999 9999999999999999753333578999999999999999999999999999
No 5
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=100.00 E-value=1.4e-90 Score=719.90 Aligned_cols=333 Identities=25% Similarity=0.339 Sum_probs=296.6
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEEEEeecCCCCceeeccccCCCCCCCCc--ccccCCCC-CCCCCCCCceeeeeee--ee
Q 014226 60 TVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKPVEHPSELPK--WNYDGSST-GQAPGEDSEVILYPQA--IF 134 (428)
Q Consensus 60 ~~~~~~~~l~~~~~p~~~~v~~~~~d~~G~G~~lR~K~vp~~~~~~l~~--~~fdgs~~-g~~~~~~~D~~l~PD~--~~ 134 (428)
+.+++.++++++ .|++|++.|+|++|+ +|+|.||+++|+++.. ++||||++ |+...+++|++|+||+ ++
T Consensus 5 ~~~~~~~~~~~~---~i~~v~l~~~D~~G~---~r~k~ip~~~~~~~~~~G~~fdgssi~g~~~~~~~D~~l~PD~~T~~ 78 (444)
T 3qaj_A 5 TREDIEKLVKEE---NVKYIRLQFTDILGT---IKNVEIPVSQLGKALDNKVMFDGSSIEGFVRIEESDMYLYPDLNTFV 78 (444)
T ss_dssp CHHHHHHHHHHH---TCCEEEEEEECSSSC---EEEEEEEGGGHHHHHTTCCEEETTTSTTSSCTTCCEEECCBCGGGCE
T ss_pred CHHHHHHHHHhC---CCCEEEEEEECCCCC---EEEEEEeHHHHHHHHhCCccccCccccCccCCCCCCEEEEEecCceE
Confidence 357788899986 799999999999999 9999999999976543 78999999 9988889999999997 89
Q ss_pred ecCCCCC--CeEEEEEEEecCCCCCCCCCHHHHHHHHHHhhhccccc-ceEeeeeeEEEecCCCCCCCCCCCCCCCCCCC
Q 014226 135 KDPFRGG--NNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEV-PWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQG 211 (428)
Q Consensus 135 ~~Pw~~~--~~a~Vlcd~~~~dG~P~~~~PR~~Lkr~l~~l~~~G~~-~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~ 211 (428)
++||.++ ++++|+||++++||+|++.|||++|||++++++++|++ +++|+|+|||||+.+++ +.+ ...+.+++
T Consensus 79 ~~Pw~~~~~~~a~v~cd~~~~dG~p~~~~pR~iLkr~~~~~~~~G~~~~~~g~E~EF~l~~~~~~---g~~-~~~~~~~~ 154 (444)
T 3qaj_A 79 IFPWTAEKGKVARFICDIYNPDGTPFEGDPRNNLKRILKEMEDLGFSDFNLGPEPEFFLFKLDEK---GEP-TLELNDKG 154 (444)
T ss_dssp EEHHHHHHHCEEEEEBCCBCTTSCBCSSCHHHHHHHHHHHHHTTTCCEEEEEEEECEEEEEECSS---SCE-EEEESCCC
T ss_pred ECccccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHHHcCCCeeeEEeceEEEEEecCCC---CCC-CCcCcCCC
Confidence 9999985 59999999999999999999999999999999999999 99999999999997643 211 12456778
Q ss_pred CcccccCcChhhHHHHHHHHHHHHHHcCCceeeccCCCCCCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeec
Q 014226 212 PYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLD 291 (428)
Q Consensus 212 ~~~~~~~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFm 291 (428)
+||+..+.+. ..+++++|+++|+++||+||++|||+|||||||++.|+++|++||++++||++||+||++||++||||
T Consensus 155 ~y~~~~~~d~--~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFm 232 (444)
T 3qaj_A 155 GYFDLAPTDL--GENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYAGAVRSCDDIQTFKLVVKTIARKHGLHATFM 232 (444)
T ss_dssp CTTCCTTTSC--CTTHHHHHHHHHHTTTCCEEEEEECSSTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTEEEECC
T ss_pred CccccCCCcc--hHHHHHHHHHHHHHCCCCeEEeEcCcCCCcEEEecCCChHHHHHHHHHHHHHHHHHHHHHcCCEEEEc
Confidence 8998887764 24555566667899999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCceeeecccccccc-----C---CCchH-HHHHHHHHHHHhHHHHhhcccc---cccccCCCCCCCCCCCc
Q 014226 292 PKPIEGDWNGAGCHTNYSTKSMR-----E---EGGYE-TIKKAILNLSLRHKEHISAYGE---GNERRLTGKHETASIDS 359 (428)
Q Consensus 292 pKP~~~~~~GsG~H~H~SL~~~~-----~---~~g~~-~~~~fiaGl~L~h~~al~a~~~---nSYkRl~p~~~ap~~~~ 359 (428)
|||+.+. +|||||+|+|||+.. + ..|++ ..++||||| |+|+++++||++ ||||||+||+|||+ +
T Consensus 233 pKP~~~~-~GsG~H~H~Sl~~~g~n~f~~~~~~~~lS~~~~~fiaGl-L~h~~~l~a~~~PtvNSYkRl~pg~~AP~--~ 308 (444)
T 3qaj_A 233 PKPLFGV-NGSGMHCNLSLFKNGVNAFFDENADLQLSETAKHFIAGI-VKHATSFTAVTNPTVNSYKRLVPGYEAPC--Y 308 (444)
T ss_dssp SCSSTTS-CCCCEEEEEEEEETTEETTCCTTSSSSCCHHHHHHHHHH-HHTHHHHHHHHSCSSTHHHHSCTTSSSSC--B
T ss_pred CCcCCCC-CCCcceeeeccccCCCcccCCCCcccchHHHHHHHHHHH-HHHHHHHHHHHCCCCcccccCCCCCcCCC--c
Confidence 9999995 999999999999731 1 12343 458999999 999999999986 99999999999999 9
Q ss_pred eeeccCCCcceeeeccCCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcC
Q 014226 360 FSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILW 410 (428)
Q Consensus 360 ~~WG~~NRsa~iRvp~~~~~~~~~riE~R~~da~aNPYLalAaiLaAGl~G 410 (428)
++||.+||+++||||...+ +++|||+|+||++|||||++||+|+|||+|
T Consensus 309 ~~Wg~~NRsa~iRip~~~~--~~~RiE~R~pd~~aNPYLa~Aa~LaAGldG 357 (444)
T 3qaj_A 309 VAWSAQNRSPLIRIPASRG--ISTRVEVRSVDPAANPYLALSVLLAAGLDG 357 (444)
T ss_dssp CCEESSCSSSSEECCSCCG--GGCCEEECCCCTTSCHHHHHHHHHHHHHHH
T ss_pred ceeecCCCcceEeeccCCC--CCceEEecCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999996543 478999999999999999999999999999
No 6
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.6e-86 Score=688.91 Aligned_cols=316 Identities=17% Similarity=0.127 Sum_probs=279.4
Q ss_pred CCCCEEEEEEEeecCCCCceeeccccCCCCCCCCc--ccccCC--CC-CCCC-------CCCCceeeeeee--eeecCCC
Q 014226 74 PYTDKIIAEYIWIGGTGIDMRSKSKPVEHPSELPK--WNYDGS--ST-GQAP-------GEDSEVILYPQA--IFKDPFR 139 (428)
Q Consensus 74 p~~~~v~~~~~d~~G~G~~lR~K~vp~~~~~~l~~--~~fdgs--~~-g~~~-------~~~~D~~l~PD~--~~~~Pw~ 139 (428)
+.|++|++.|+|++|+ +|+|.||+++|+++.. ++||++ ++ ++.. .+++|++|+||+ ++++||.
T Consensus 5 ~~v~~v~l~~~D~~G~---~r~k~vp~~~~~~~~~~G~~f~~s~~~~~~~~~~~~~~~~~~~~D~~l~PD~~T~~~~Pw~ 81 (443)
T 4hpp_A 5 QPVRLVSFVTTDLAGI---TRGRSLPLATLEEQLASGCGWVPANSSLTPQDLIDESSPWGSHGDLRLLPDPNSRVRVEQG 81 (443)
T ss_dssp CCCCEEEEEEECTTSC---EEEEEEEGGGHHHHHTTCEEECGGGGGCCTTSCCCTTCSCSSSCCEEEEECGGGCEEECCC
T ss_pred CCCCEEEEEEECCCCC---EEEEEEEHHHHHHHHhCCcccCchhheeeccCccccccCCCCCCCEEEEEcccceEECCcc
Confidence 3799999999999999 9999999999876532 667765 22 3322 245999999997 8999999
Q ss_pred CC----CeEEEEEEEecCCCCCCCCCHHHHHHHHHHhhhcccccceEeeeeeEEEecCCCCCCCCCCCCCCCCCCCCccc
Q 014226 140 GG----NNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYC 215 (428)
Q Consensus 140 ~~----~~a~Vlcd~~~~dG~P~~~~PR~~Lkr~l~~l~~~G~~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (428)
++ ++++|+||++++||+|++.|||++|||++++++++|+++++|+|+|||||+. .|.++++||+
T Consensus 82 ~~~~~~~~a~v~cd~~~~dG~p~~~~pR~~L~r~~~~~~~~G~~~~~g~E~EF~l~~~------------~p~~~~~~y~ 149 (443)
T 4hpp_A 82 PDAAAPALDYLHGNLVETDGTPWPACPRSLLRAEVERYRDSGLQVIAAFEHEFSLLGL------------PGERPAAAFS 149 (443)
T ss_dssp SSTTSCCEEEEEEEEECTTSCBCTTCHHHHHHHHHHHHHHTTEEEEEEEEEEEEEECC------------CSSSCCCTTC
T ss_pred cccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHHHcCCeEEEEeeeEEEEecc------------ccCCCCccCC
Confidence 82 5999999999999999999999999999999999999999999999999952 2345678998
Q ss_pred ccCcChhhHHHHHHHHHHHHHHcCCceeeccCCCCCCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeecccCC
Q 014226 216 GAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPI 295 (428)
Q Consensus 216 ~~~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFmpKP~ 295 (428)
..+.+. .++++++|+++|+++||+||++|||+|||||||++.|+++|++||++++||++||+||++||++|||||||+
T Consensus 150 ~~~~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~ 227 (443)
T 4hpp_A 150 LQAQRA--AGQFPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPA 227 (443)
T ss_dssp HHHHHH--TTTHHHHHHHHHHHTTCCEEEEEECSSTTEEEEEECCEETHHHHHHHHHHHHHHHHHHHHHTCEEECSSSSS
T ss_pred CCcccc--hHHHHHHHHHHHHHCCCCeEEeecCCCCCceEEEecCCcHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccC
Confidence 877654 577888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeeeccccccccC------C---CchH-HHHHHHHHHHHhHHHHhhcccc---cccccCCCCCCCCCCCceee
Q 014226 296 EGDWNGAGCHTNYSTKSMRE------E---GGYE-TIKKAILNLSLRHKEHISAYGE---GNERRLTGKHETASIDSFSW 362 (428)
Q Consensus 296 ~~~~~GsG~H~H~SL~~~~~------~---~g~~-~~~~fiaGl~L~h~~al~a~~~---nSYkRl~p~~~ap~~~~~~W 362 (428)
.+ .+|||||+|+|||+.++ + .|++ ..++||+|| |+|+++++||++ ||||||+|++|||+ +++|
T Consensus 228 ~~-~~GsG~H~h~Sl~~~~G~n~f~~~~~~~~lS~~~~~fiaGl-l~h~~~l~a~~~P~~NSYkRL~pg~~AP~--~~~W 303 (443)
T 4hpp_A 228 PG-AVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGV-LAHLPALCALTAPTAASYLRLKPHHWSAA--YACL 303 (443)
T ss_dssp TT-CCCCCEEEEEEEEETTSCBSSBCTTSGGGBCHHHHHHHHHH-HHHHHHHHHHHSCSGGGHHHHSCSTTCCC--BCCE
T ss_pred CC-CCcccceeeeeeecCCCCccccCCCCccchhHHHHHHHHHH-HHHHHHHHHHhCCCCcchhccCCCCcCCC--ccee
Confidence 99 49999999999997431 1 2344 357999999 999999999986 99999999999998 9999
Q ss_pred ccCCCcceeeeccCC---CC--CCccEEEecCCCCCCCHHHHHHHHHHHhhcC
Q 014226 363 GVANRGCSIRVGRET---EK--QGKGYLEDRRPASNMDPYVVTSLLAETTILW 410 (428)
Q Consensus 363 G~~NRsa~iRvp~~~---~~--~~~~riE~R~~da~aNPYLalAaiLaAGl~G 410 (428)
|.+||+++||||... +. ++++|||+|+||++|||||++||+|+|||+|
T Consensus 304 G~~NRsa~iRip~~~~~~~~~~~~~~riE~R~pd~~aNPYLa~AaiLaAGl~G 356 (443)
T 4hpp_A 304 GLRNREAALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLG 356 (443)
T ss_dssp ESSCTTSSEEEECCCCSSSCCSSTTCEEEEEEECTTSCHHHHHHHHHHHHHHH
T ss_pred ccCCCceeEEeccccccCCCccccccEEEEcCCCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999864 21 2578999999999999999999999999999
No 7
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*
Probab=100.00 E-value=1.2e-85 Score=691.04 Aligned_cols=339 Identities=23% Similarity=0.311 Sum_probs=297.3
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEEEEeecCCCCceeeccccCCCCCC-CC--cccccCCCC-CCCCCCCCceeeeeee--e
Q 014226 60 TVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKPVEHPSE-LP--KWNYDGSST-GQAPGEDSEVILYPQA--I 133 (428)
Q Consensus 60 ~~~~~~~~l~~~~~p~~~~v~~~~~d~~G~G~~lR~K~vp~~~~~~-l~--~~~fdgs~~-g~~~~~~~D~~l~PD~--~ 133 (428)
+.+++.++++++ .|++|++.|+|++|+ +|+|.||+++|.+ +. .++||||++ ||..++++|++|+||+ +
T Consensus 13 T~edv~~~i~~~---~I~~V~l~f~D~~G~---~r~k~ip~~~~~~~~~~~G~~fdgssi~G~~~~~~sD~~l~PD~~T~ 86 (486)
T 4acf_A 13 TPDDVFKLAKDE---KVEYVDVRFCDLPGI---MQHFTIPASAFDKSVFDDGLAFDGSSIRGFQSIHESDMLLLPDPETA 86 (486)
T ss_dssp CHHHHHHHHHHT---TCCEEEEEEECSSSC---EEEEEEEGGGCSHHHHHTCEEEEGGGSTTSCCGGGCEEEEEECGGGC
T ss_pred CHHHHHHHHHHC---CCcEEEEEEECCCCc---EEEEEEEHHHHHHHHHHCCCeeecccccccccCCCCCEEEEEcccee
Confidence 567788999997 899999999999999 9999999999965 32 378999999 9988888999999998 8
Q ss_pred eecCCCCCCeEEEEEEEecC-CCCCCCCCHHHHHHHHHHhhhcc--cccceEeeeeeEEEecCCC-----C---------
Q 014226 134 FKDPFRGGNNILVICDTYTP-AGEPIPTNKRHRAAEIFSNSKVS--AEVPWFGIEQEYTLLQQNV-----K--------- 196 (428)
Q Consensus 134 ~~~Pw~~~~~a~Vlcd~~~~-dG~P~~~~PR~~Lkr~l~~l~~~--G~~~~~g~E~EF~L~~~~~-----~--------- 196 (428)
+++||.++.++.|+|+++++ +|+|++.|||++||++++++++. |+++++|+|+|||||++.. .
T Consensus 87 ~~~Pw~~~~~~~v~~~~~d~~~g~P~~~~pR~iLk~~~~~~~~~g~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~ 166 (486)
T 4acf_A 87 RIDPFRAAKTLNINFFVHDPFTLEPYSRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAI 166 (486)
T ss_dssp EECSSCSSCEEEEEEEEECTTTCCBCTTCHHHHHHHHHHHHHHHSSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECT
T ss_pred EECCcCCCccEEEEEEEeeCCCCCCCCCCchHHHHHHHHHHHHcCCcceecccceeEEEEeccccccccccCCcccCCcc
Confidence 99999998889999999985 89999999999999999999875 5588899999999997421 0
Q ss_pred ----------CCCCCCC-CCCCCCCCCcccccCcChhhHHHHHHHHHHHHHHcCCceeeccCCCCC-CcEEEEeCCCcHH
Q 014226 197 ----------WPLGWPV-GAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMP-GQWEYQVGPSVGI 264 (428)
Q Consensus 197 ----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h~E~gp-GQ~Ei~l~~~~~l 264 (428)
.+.++|. ++.+...++||+..+.+. ..+++++++++|+++||+||++|||+|| |||||++.|+++|
T Consensus 167 ~g~~~~~~~~~~~g~p~~~~~~~~~~~y~~~~~~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~gp~GQ~Ei~~~~~~~l 244 (486)
T 4acf_A 167 SGWWNTGAATEADGSPNRGYKVRHKGGYFPVAPNDQ--YVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLL 244 (486)
T ss_dssp TBGGGTTCSBCTTSCBCCCCCBCTTCCSSBCTTTSC--CHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHH
T ss_pred ccccCCCCcccCCCCCCCCcccccCCccccCCcchh--HHHHHHHHHHHHHhCCceEEeeeeeeeccceeEEeccCcchh
Confidence 0011111 223345667777777765 4788899999999999999999999998 9999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCeEeecccCCCCCCCCceeeecccccccc-----CC---Cch-HHHHHHHHHHHHhHHH
Q 014226 265 DAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMR-----EE---GGY-ETIKKAILNLSLRHKE 335 (428)
Q Consensus 265 ~aAD~~~~~K~~ik~vA~~hGl~ATFmpKP~~~~~~GsG~H~H~SL~~~~-----~~---~g~-~~~~~fiaGl~L~h~~ 335 (428)
++||++++||++||+||++||++|||||||+.+. +|||||+|+|||+.. ++ .|+ ...++||+|| |+|++
T Consensus 245 ~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~-~GsG~H~H~Sl~~~g~n~f~~~~~~~~lS~~~~~fiaGl-l~h~~ 322 (486)
T 4acf_A 245 HAADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGD-NGSGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGL-LHHAP 322 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEECCSCSSTTS-CCCCEEEEEEEEETTEESSBCTTSGGGBCHHHHHHHHHH-HHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHcCCeEEEeeccccCC-CcccceeeeeeccCCCccccccccccccchHHHHHHHHH-HHhhh
Confidence 9999999999999999999999999999999995 999999999999742 11 234 3568999999 99999
Q ss_pred Hhhcccc---cccccCCCCCCCCCCCceeeccCCCcceeeeccCCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcC
Q 014226 336 HISAYGE---GNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILW 410 (428)
Q Consensus 336 al~a~~~---nSYkRl~p~~~ap~~~~~~WG~~NRsa~iRvp~~~~~~~~~riE~R~~da~aNPYLalAaiLaAGl~G 410 (428)
+++||++ ||||||+|++|||+ +++||.+||+++||||....+++++|||+|+||++|||||++||+|+|||+|
T Consensus 323 ~l~a~~~PtvNSYkRl~pg~~AP~--~~~wg~~NRsa~iRip~~~~~~~~~riE~R~pd~~aNPYLalAailaAGldG 398 (486)
T 4acf_A 323 SLLAFTNPTVNSYKRLVPGYEAPI--NLVYSQRNRSACVRIPITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDG 398 (486)
T ss_dssp HHHHHHSCSTTHHHHSSTTSSSCS--BSCEEETCTTSSEEECCCTTCTTTCCEEECCCCSSSCHHHHHHHHHHHHHHH
T ss_pred cceeeecCCCcchhccCCCCcCCc--eeEEeccCCCcceEecccCCCCccceeeecCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999985 99999999999999 9999999999999999766555678999999999999999999999999999
No 8
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=100.00 E-value=1.4e-85 Score=687.58 Aligned_cols=337 Identities=22% Similarity=0.312 Sum_probs=298.2
Q ss_pred HHHHHHHHhcCCCCCCCEEEEEEEeecCCCCceeeccccCCCCCC-CC--cccccCCCC-CCCCCCCCceeeeeee--ee
Q 014226 61 VNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKPVEHPSE-LP--KWNYDGSST-GQAPGEDSEVILYPQA--IF 134 (428)
Q Consensus 61 ~~~~~~~l~~~~~p~~~~v~~~~~d~~G~G~~lR~K~vp~~~~~~-l~--~~~fdgs~~-g~~~~~~~D~~l~PD~--~~ 134 (428)
.+++.++++++ .|++|++.|+|+.|. +|+|.+|+++|++ +. .++||||++ ||...+++|++|+||+ ++
T Consensus 2 ~~~~~~~~~~~---~i~~v~~~~~D~~G~---~r~k~vp~~~~~~~~~~~g~~fdgss~~g~~~~~~sD~~l~PD~~T~~ 75 (468)
T 1f52_A 2 AEHVLTMLNEH---EVKFVDLRFTDTKGK---EQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAV 75 (468)
T ss_dssp HHHHHHHHHHT---TCCEEEEEEECTTSC---EEEEEEEGGGCCHHHHHHCEEEEGGGSTTSCCSSCCEEEEEECGGGCE
T ss_pred HHHHHHHHHhC---CCCEEEEEEECCCCC---EEEEEEEHHHHHHHHhhCceeeccccccccccCCCCCEEEEEecCCcE
Confidence 45688889987 799999999999999 9999999999987 33 488999998 9988789999999997 89
Q ss_pred ecCCCCCCeEEEEEEEecC-CCCCCCCCHHHHHHHHHHhhhcccc--cceEeeeeeEEEecCCC-----CC--------C
Q 014226 135 KDPFRGGNNILVICDTYTP-AGEPIPTNKRHRAAEIFSNSKVSAE--VPWFGIEQEYTLLQQNV-----KW--------P 198 (428)
Q Consensus 135 ~~Pw~~~~~a~Vlcd~~~~-dG~P~~~~PR~~Lkr~l~~l~~~G~--~~~~g~E~EF~L~~~~~-----~~--------~ 198 (428)
++||.++++++|+||++++ +|+|++.|||++||+++++++++|+ ++++|+|+|||||+.+. +. .
T Consensus 76 ~~Pw~~~~~~~v~~d~~~~~~G~p~~~~pR~ilk~~~~~l~~~G~~~~~~~G~E~EFfl~~~~~~~~~~~~~~~~~~~~~ 155 (468)
T 1f52_A 76 IDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIE 155 (468)
T ss_dssp ECSSCSSCEEEEEEEEECTTTCCCCTTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTT
T ss_pred EccccCCCceEEEEEEEeCCCCCcCCCCHHHHHHHHHHHHHHcCCCcceEEEeeeEEEEEeccccccCCccccccccccc
Confidence 9999976699999999999 7999999999999999999999999 89999999999998531 00 0
Q ss_pred CCCCC---------CCCCCCCCCcccccCcChhhHHHHHHHHHHHHHHcCCceeeccCCCCCC-cEEEEeCCCcHHHHhH
Q 014226 199 LGWPV---------GAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPG-QWEYQVGPSVGIDAGD 268 (428)
Q Consensus 199 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h~E~gpG-Q~Ei~l~~~~~l~aAD 268 (428)
.+|+. +..+..+++||+..+.+. .++++++|++.|+++||+||+.|||+||| ||||++.|++++++||
T Consensus 156 ~~~~~~~~~~~~~~g~~~~~~~~Y~~~~~~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~apggQ~Ei~~~~~~~l~aAD 233 (468)
T 1f52_A 156 GAWNSSTKYEGGNKGHRPGVKGGYFPVPPVDS--AQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKAD 233 (468)
T ss_dssp CGGGGGCCCTTCCCCCCCCTTCCSSBCTTSSC--CHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHH
T ss_pred cccCCCccccccCCCCCCCCCCCccCCCcccc--HHHHHHHHHHHHHHCCCCeEEeecCCCCceeEEEeccCCCHHHHHH
Confidence 11211 234667788999888765 68899999999999999999999999996 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCeEeecccCCCCCCCCceeeecccccccc-----CC--Cch-HHHHHHHHHHHHhHHHHhhcc
Q 014226 269 HIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMR-----EE--GGY-ETIKKAILNLSLRHKEHISAY 340 (428)
Q Consensus 269 ~~~~~K~~ik~vA~~hGl~ATFmpKP~~~~~~GsG~H~H~SL~~~~-----~~--~g~-~~~~~fiaGl~L~h~~al~a~ 340 (428)
++++||++||+||++||++|||||||+.+. +|||||+|+|||+.. ++ .++ ...++||+|| |+|+++++||
T Consensus 234 ~~~~~k~~vk~vA~~hGl~atFmpKP~~g~-~GSG~H~h~Sl~~~g~Nlf~~~~~~~ls~~~~~~iaGl-l~h~~~l~a~ 311 (468)
T 1f52_A 234 EIQIYKYVVHNVAHRFGKTATFMPKPMFGD-NGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGV-IKHAKAINAL 311 (468)
T ss_dssp HHHHHHHHHHHHHHHTTCEEECCSCSSTTS-CCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHH-HHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEeCCCCCCC-CCCCcceeeccccCCCcccCCCCcchHHHHHHHHHHHH-HHHHHHhHhH
Confidence 999999999999999999999999999995 999999999999731 11 123 3568999999 9999999999
Q ss_pred cc---cccccCCCCCCCCCCCceeeccCCCcceeeeccCCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcC
Q 014226 341 GE---GNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILW 410 (428)
Q Consensus 341 ~~---nSYkRl~p~~~ap~~~~~~WG~~NRsa~iRvp~~~~~~~~~riE~R~~da~aNPYLalAaiLaAGl~G 410 (428)
++ ||||||+|++|||+ +++||.+||+++||||.... ++++|||+|+||++|||||++|++|+|||+|
T Consensus 312 ~ap~~NSYkRL~pg~eAP~--~i~wg~~NRsa~iRiP~~~~-~~~~riE~R~pd~~aNPYLalaailaagL~G 381 (468)
T 1f52_A 312 ANPTTNSYKRLVPGYEAPV--MLAYSARNRSASIRIPVVAS-PKARRIEVRFPDPAANPYLCFAALLMAGLDG 381 (468)
T ss_dssp HSCSGGGGGTSSSCSSCCC--EEEEESSCTTEEEECCCCSC-GGGCCEEECCCCTTSCHHHHHHHHHHHHHHH
T ss_pred hcCCccchhccCCCCcCcC--cceeccCCcccceeeCCCCC-CCCCEEEeCCCCCCCCHHHHHHHHHHHHHHH
Confidence 75 99999999999999 99999999999999997422 2468999999999999999999999999999
No 9
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=100.00 E-value=7.4e-77 Score=613.87 Aligned_cols=315 Identities=17% Similarity=0.189 Sum_probs=268.6
Q ss_pred HHHHHHHHhcCCCCCCCEEEEEEEeecCCCCceeeccccCCCCCCCCc-ccccCCC-C-CCC-CCCCCceeeeeee--ee
Q 014226 61 VNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKPVEHPSELPK-WNYDGSS-T-GQA-PGEDSEVILYPQA--IF 134 (428)
Q Consensus 61 ~~~~~~~l~~~~~p~~~~v~~~~~d~~G~G~~lR~K~vp~~~~~~l~~-~~fdgs~-~-g~~-~~~~~D~~l~PD~--~~ 134 (428)
.+++.++++++ .|++|++.|+|++|. +|+|.+|+++|+++.. ++|||++ + ++. .+.++|++|+||+ ++
T Consensus 2 ~~~~~~~l~~~---~i~~v~~~~~D~~G~---~r~k~ip~~~~~~~~~g~~~~gs~~~~~~~~~~~~sD~~l~PD~~T~~ 75 (421)
T 2j9i_A 2 AEHVLTMLNEH---AAAFVRFEATDAAGA---SRSKSIPAQFFEKVIHARGYLEDGEVNAGAAGAAASDIVLMPELSTAA 75 (421)
T ss_dssp HHHHHHHHHHT---TCSEEEEEEECSSSC---EEEEEEEGGGCCTTHHHHCEEECGGGSTTTCCTTCCCEEEEECSSCCE
T ss_pred HHHHHHHHHhC---CCCEEEEEEECCCCC---EEEEEEEHHHHHHhhcCCeeecccCcccccccCCCCCEEEEEecCceE
Confidence 35688889987 799999999999998 9999999999965543 7889875 4 554 4456999999998 89
Q ss_pred ecCC-CCCCeEEEEEEEecCCCCCCCCCHHHHHHHHHHhhhcccc--cceEeeeeeEEEecCCCCCCCCCCCCCCCCCCC
Q 014226 135 KDPF-RGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAE--VPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQG 211 (428)
Q Consensus 135 ~~Pw-~~~~~a~Vlcd~~~~dG~P~~~~PR~~Lkr~l~~l~~~G~--~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~ 211 (428)
++|| .+ ++++|+|| ||+|++.|||++||+++++++++|+ ++++|+|+|||||+.+.... + ..
T Consensus 76 ~~Pw~~~-~~a~v~cd----dG~P~~~~pR~iLk~~~~~~~~~G~~d~~~~g~E~EF~l~~~~~~~~-~---------~p 140 (421)
T 2j9i_A 76 VAAAAAA-ATAAVICD----GGAAAAASPRYIARAALAQLQAAGAAAGLLSAFIADFCIFGVPEVIN-S---------KT 140 (421)
T ss_dssp ECTTSSS-SEEEEEEE----EESSCSCCHHHHHHHHHHHHHHTTSCSEECCEECCCCEEESCCEEEE-C---------SS
T ss_pred EcCcCCC-CeEEEEcC----CCCCCCCChHHHHHHHHHHHHhcCCccCceEEeeeEEEEEecCCCCC-C---------CC
Confidence 9999 66 59999999 7999999999999999999999999 99999999999998753210 0 11
Q ss_pred CcccccCcChhhHHHHHHHHHHHHHHcCCceeeccCCCCCCcEEEEeCCCc-HHHHhHHHHHHHHHHHHHHHHcCCeEee
Q 014226 212 PYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSV-GIDAGDHIWCSRYLLERITEQAGVVLSL 290 (428)
Q Consensus 212 ~~~~~~~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~-~l~aAD~~~~~K~~ik~vA~~hGl~ATF 290 (428)
.||+..+.+. ..+++++|+++|+ +||+||++|||+|||||||++.|++ ++++||++++||++||+||++||++|||
T Consensus 141 ~y~~~~~~~~--~~~~~~~i~~~l~-~Gi~ve~~h~E~apgQ~Ei~~~~~~~~l~aaD~~~~~k~~vk~vA~~~G~~atF 217 (421)
T 2j9i_A 141 ISFPASTTAA--AADQPQEAAAGGA-AGAAAGAAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIASA 217 (421)
T ss_dssp CEEEECCCTT--CTTGGGSCCTTCC-CSCCCBTTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTTTCEEEC
T ss_pred CcCCCCcccc--hhHHHHHHHHHHh-CCCCeEEeecCCCCCcEEEecCCCChHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 3555555433 2455567777899 9999999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCCceeeecccccccc--C------CC--ch-HHHHHHHHHHHHhHHHHhhcccc---cccccCCCCCCCCC
Q 014226 291 DPKPIEGDWNGAGCHTNYSTKSMR--E------EG--GY-ETIKKAILNLSLRHKEHISAYGE---GNERRLTGKHETAS 356 (428)
Q Consensus 291 mpKP~~~~~~GsG~H~H~SL~~~~--~------~~--g~-~~~~~fiaGl~L~h~~al~a~~~---nSYkRl~p~~~ap~ 356 (428)
|||| + ++|||| +|+|||+.+ + ++ |+ ...++||+|| |+|+++++||++ |||||. .|+|.
T Consensus 218 mpKP--~-~~GSG~-~h~Sl~~~~~~G~nlf~~~~~~~ls~~~~~~iaGi-l~h~~~l~a~~~p~~NSYk~~---~~ap~ 289 (421)
T 2j9i_A 218 AAAA--A-AAAAGA-GSHSIWDVGAAGTNAFAGASGARATLTGAKWLAGL-LAAAAAAAAAAAAAAAAAAAA---AAGAA 289 (421)
T ss_dssp CTTS--S-TTSCCC-BCCEEECEEETTEESSCSSSGGGCCHHHHHHHHHH-HHHHHHHHHHHTCSHHHHHHT---SSSTT
T ss_pred cCCc--C-CCCCce-EEEeccccCCCCceeecCCCCccccHHHHHHHHHH-HHHHHHHHHHhCCCccccCCC---CCCCc
Confidence 9999 6 599999 999999731 1 11 23 3458999999 999999999986 999954 56776
Q ss_pred CCce---eeccCCCcceeeeccCCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcC
Q 014226 357 IDSF---SWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILW 410 (428)
Q Consensus 357 ~~~~---~WG~~NRsa~iRvp~~~~~~~~~riE~R~~da~aNPYLalAaiLaAGl~G 410 (428)
++ +||.+||+++||||.. ..++++|||+|+||++|||||++|++|+|||+|
T Consensus 290 --~~~~~~wG~~NRsa~iRip~~-~~~~~~riE~R~pd~~aNPYLa~aailaagl~G 343 (421)
T 2j9i_A 290 --AAAATAWGAAAAACALNIAAA-AAAKGAQIENKAGAAAANPYLVLAATVAAGLDG 343 (421)
T ss_dssp --CCCEEEEESSCTTEEEEEECC-SSGGGCEEEECSCBTTSCHHHHHHHHHHHHHHH
T ss_pred --CeeeeeeecCCCccceeeccc-CCCCCCEEEEcCCCCCCChHHHHHHHHHHHhhh
Confidence 66 9999999999999976 223578999999999999999999999999999
No 10
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis}
Probab=100.00 E-value=3.2e-59 Score=499.38 Aligned_cols=281 Identities=19% Similarity=0.207 Sum_probs=209.4
Q ss_pred cccCCCC---CCCCCCCCceeeeeee---eeecCCCCCCeEEEEEEEecCCCC------CCCCCHHHHHHHHHHhhhccc
Q 014226 110 NYDGSST---GQAPGEDSEVILYPQA---IFKDPFRGGNNILVICDTYTPAGE------PIPTNKRHRAAEIFSNSKVSA 177 (428)
Q Consensus 110 ~fdgs~~---g~~~~~~~D~~l~PD~---~~~~Pw~~~~~a~Vlcd~~~~dG~------P~~~~PR~~Lkr~l~~l~~~G 177 (428)
-.||||+ |+....++|+++.||+ .++.| +|..+.|.+++.+|+ |+..|||++||++++.++..|
T Consensus 127 E~DgSS~p~gG~r~t~earg~~~~D~ts~afi~~----~TL~IP~~f~s~~Ge~ld~ktPL~rsPR~ilk~A~~~Lk~~G 202 (729)
T 3o6x_A 127 EPDASSFPNGGIRNTFEARGYTAWDGSSPAFVVD----TTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQLFD 202 (729)
T ss_dssp ---------------------CCBCSSSCCEEET----TEEECCBCCC----CCCBSHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred CCccccCCCccchhhhhccCceecCCCCCeEEeC----CeEEEEEEEEeCCCCcCCCCCchhhCHHHHHHHHHHHHHHcC
Confidence 3589998 8888899999999997 56666 499999999998886 577899999999999999999
Q ss_pred c-----cceEeeeeeEEEecCCCC--CCC----CCCCCCCCCCCC-----CcccccCcChhhHHHHHHHHHHHHHHcCCc
Q 014226 178 E-----VPWFGIEQEYTLLQQNVK--WPL----GWPVGAYPGPQG-----PYYCGAGADKSFGRDIADAHYKACLYAGIN 241 (428)
Q Consensus 178 ~-----~~~~g~E~EF~L~~~~~~--~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~l~~~Gi~ 241 (428)
. ++.+|+|+|||||++... .+. |+..-+.....+ +||...+ +. ..+++++|++.|+++||+
T Consensus 203 ~d~~~v~~~~G~E~EFFLfd~~~~~~r~dl~~tGrtl~G~~P~kgq~l~d~Yf~~~p-d~--~~~~~~di~~~L~~~GI~ 279 (729)
T 3o6x_A 203 KNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIP-PR--VTAFMKELEIECHKLGIP 279 (729)
T ss_dssp SCCCCEEEEEEEEECEEEEEHHHHHSCTTHHHHSSCSCCCC--------------CC-HH--HHHHHHHHHHHHHHHTCC
T ss_pred CCCccceEEEEeccEEEEEecchhccCcccccccccccCCCCCCCCCCCCccCCCCc-hh--HHHHHHHHHHHHHHCCCC
Confidence 7 699999999999987421 111 111011112233 6776665 32 466666677779999999
Q ss_pred eeeccCCCCCCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeecccCCCCCCCCceeeeccccccccC------
Q 014226 242 ISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMRE------ 315 (428)
Q Consensus 242 ve~~h~E~gpGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFmpKP~~~~~~GsG~H~H~SL~~~~~------ 315 (428)
|++.|+|+|||||||++.|++++++||++++||++||+||++||++|||||||+.+ .+|||||+|+|||+.++
T Consensus 280 ve~~H~EvaPGQ~EI~~~~~~al~AAD~~~l~K~vvK~VA~~hGl~ATFMPKP~~g-~nGSG~HvH~SL~~~~G~NLF~~ 358 (729)
T 3o6x_A 280 VKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNG-VNGSGKHNNWSLCTDTGINLFAP 358 (729)
T ss_dssp EEEECBCSSTTEECCEECCEEHHHHHHHHHHHHHHHHHHHHHTTEEEECSSCSSTT-SCCCBEEEEEEEEETTCCCSSCC
T ss_pred eEEeecCCCCCceEeccCCChHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCC-CCCCcceeeccccCCCCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999 59999999999997521
Q ss_pred CC---c---hH-HHHHHHHHHHHhHHHHhhcccc---cccccCCCCCCCCCCCc----------------ee--------
Q 014226 316 EG---G---YE-TIKKAILNLSLRHKEHISAYGE---GNERRLTGKHETASIDS----------------FS-------- 361 (428)
Q Consensus 316 ~~---g---~~-~~~~fiaGl~L~h~~al~a~~~---nSYkRl~p~~~ap~~~~----------------~~-------- 361 (428)
++ + ++ ..++||+|+ |+|+++|+||++ ||| || |++|||+ + +.
T Consensus 359 ~d~~~~~~~~s~~~~~fIaGV-LkHa~aL~A~~aPt~NSY-RL-~g~EAP~--~iisi~lG~~l~~vl~~i~~~~~g~~~ 433 (729)
T 3o6x_A 359 GKNPKGNMLFLTFLVNVLMMV-HKNQDLLRASIMSAGNSH-RL-GANEAPP--AILSIFLGSQLSATLDEIVRQVTNSKM 433 (729)
T ss_dssp CSSTTTCHHHHHHHHHHHHHH-HHTHHHHHHHSCCHHHHT-TS-SSSSCCC--SCCCEECCHHHHHHHHCC---------
T ss_pred CCCccchhhHHHHHHHHHHHH-HHhHHHHHHHhCCCcccc-cc-CCCcCCc--hhhhhhhhHHHHHHHHHHHhhccCCCC
Confidence 11 1 11 246899999 999999999986 999 99 9999998 5 33
Q ss_pred ---------ecc------------CCCcceeeeccCCCCCCccEEEecCCCCCCC---HHHHHHHHHHHhhcC
Q 014226 362 ---------WGV------------ANRGCSIRVGRETEKQGKGYLEDRRPASNMD---PYVVTSLLAETTILW 410 (428)
Q Consensus 362 ---------WG~------------~NRsa~iRvp~~~~~~~~~riE~R~~da~aN---PYLalAaiLaAGl~G 410 (428)
||. +|||+++|+. +.|||+|.+|+++| |||++++++|+||+|
T Consensus 434 ~~~~~~~~~~Gv~~lP~~~~d~~drNRTspfaft-------GnrfEfR~~Gss~n~a~P~l~lnaivA~~L~g 499 (729)
T 3o6x_A 434 TPEEKTTLKLGIGRIPEILLDTTDRNRTSPFAFT-------GNRFEFRAAGSSANCAAAMIAINAAMANQLNE 499 (729)
T ss_dssp ------------------------CCCSSSSCBC-------SSSEEETTSBSSSCHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccCCcccCCCCccCcCccccCCCcccc-------CCeeEEecCCcccchhhHHHHHHHHHHHHHHH
Confidence 453 9999999987 36999999999999 999999999999999
No 11
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A
Probab=98.22 E-value=2.2e-05 Score=79.21 Aligned_cols=129 Identities=12% Similarity=0.023 Sum_probs=86.6
Q ss_pred cceEeeeeeEEEecCCCCCCCCCCCCCCCCCCCCcccccCcChhhHHHHHHHHHHHHHHcCCce--eeccCCCCCCcEEE
Q 014226 179 VPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINI--SGTNGEVMPGQWEY 256 (428)
Q Consensus 179 ~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~Gi~v--e~~h~E~gpGQ~Ei 256 (428)
.+.+|+|.||++++.++. .+.. + . .++++ ..+=.+ ..+..|..-+|.|+
T Consensus 11 ~~~~GiE~E~~~Vd~~~g---------~~~~---~------~----~~~l~-------~~~~~~~~~~it~E~~~~qlEl 61 (372)
T 1r8g_A 11 PFTLGIELEMQVVNPPGY---------DLSQ---D------S----SMLID-------AVKNKITAGEVKHDITESMLEL 61 (372)
T ss_dssp TTCEEEEEEEEEEETTTT---------EECS---C------C----HHHHT-------TTSSSCSSSEEEECSSSSEEEE
T ss_pred CCceEEEEEEeeECCCCC---------CcCc---c------H----HHHHH-------hchhcccCCcccchhhccEEEe
Confidence 468999999999998632 1111 1 0 22322 222111 46889999999999
Q ss_pred EeCCC-cHHHHhHHHHHHHHHHHHHHHHcCCeE---eeccc-----------CC------------CCCCCCceeeeccc
Q 014226 257 QVGPS-VGIDAGDHIWCSRYLLERITEQAGVVL---SLDPK-----------PI------------EGDWNGAGCHTNYS 309 (428)
Q Consensus 257 ~l~~~-~~l~aAD~~~~~K~~ik~vA~~hGl~A---TFmpK-----------P~------------~~~~~GsG~H~H~S 309 (428)
+..|. +.-++.+.+...+..++++|.++|+.. .+.|+ |. .. +.-+|+|+|++
T Consensus 62 ~t~p~~~~~e~~~~L~~~~~~~~~~a~~~g~~l~~~g~~P~~~~~~~~i~~~~rY~~l~~~~g~~~~~-~~i~g~hvhv~ 140 (372)
T 1r8g_A 62 ATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQ-ATVFGQHVHVG 140 (372)
T ss_dssp ECCSBSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCGGGGCS-CCBCEEEEEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEecCCCCCCCCccCCCCCchHHHHHHHHHHHHHHh-hceeeEEEEeC
Confidence 99997 566699999999999999999988764 44443 21 11 13389999999
Q ss_pred cccccCCCchHHHHHHHHHHHHhHHHHhhcccccc
Q 014226 310 TKSMREEGGYETIKKAILNLSLRHKEHISAYGEGN 344 (428)
Q Consensus 310 L~~~~~~~g~~~~~~fiaGl~L~h~~al~a~~~nS 344 (428)
+-+. . .+-..+..+ +.++|.++|+++||
T Consensus 141 ~~~~-----~-~~~~~~~~~-~~~~p~l~aL~anS 168 (372)
T 1r8g_A 141 CASG-----D-DAIYLLHGL-SRFVPHFIALSAAS 168 (372)
T ss_dssp CSSH-----H-HHHHHHHHH-HTTHHHHHHHHCCB
T ss_pred CCCH-----H-HHHHHHHHH-HHHHHHHHHHHhCC
Confidence 9652 1 122334455 88889888887654
No 12
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A*
Probab=97.97 E-value=5.9e-05 Score=78.15 Aligned_cols=151 Identities=17% Similarity=0.104 Sum_probs=96.7
Q ss_pred HHHHHHHHHHhhhcccccceEeeeeeEEEecCCCCCCCCCCCCCCCCCCCCcccccCcChhhHHHHHHHHHHHHHHcCCc
Q 014226 162 KRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGIN 241 (428)
Q Consensus 162 PR~~Lkr~l~~l~~~G~~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~Gi~ 241 (428)
.+..|.+.++.--..+-.+.+|+|.||++++.++. .+ .+|. -..++++.+.. ..|..
T Consensus 17 ~~~~l~~~~~~~~~~~~~~~iGvE~E~~lVd~~~~---------~~---~~~~--------~~~~lL~~l~~---~~g~~ 73 (449)
T 2gwd_A 17 TREDLIAYLASGCKSKEKWRIGTEHEKFGFEVNTL---------RP---MKYD--------QIAELLNSIAE---RFEWE 73 (449)
T ss_dssp CHHHHHHHHHTTCCCGGGCCEEEEEEEEEEETTTC---------CB---CCHH--------HHHHHHHHHHH---HHTCE
T ss_pred CHHHHHHHHHhcCCCCCCCeEEEEeEEEeeecCCC---------CC---CChH--------HHHHHHHHHHH---hhccC
Confidence 34455555554323455789999999999987532 11 1110 12455555422 33421
Q ss_pred -------e-------eeccCCCCCCcEEEEeCCCc-HHHHhHHHHHHHHHHHHHHHHcCCeE---eeccc----------
Q 014226 242 -------I-------SGTNGEVMPGQWEYQVGPSV-GIDAGDHIWCSRYLLERITEQAGVVL---SLDPK---------- 293 (428)
Q Consensus 242 -------v-------e~~h~E~gpGQ~Ei~l~~~~-~l~aAD~~~~~K~~ik~vA~~hGl~A---TFmpK---------- 293 (428)
+ ..+..|-+ +|+|++..|.. .-++.+.+...+..++++|.++|+.. .+.|+
T Consensus 74 ~~~~~~~~~~l~~~~~~i~~E~~-~qiEl~t~p~~~~~e~~~~l~~~~~~~~~~a~~~g~~l~~~G~~P~~~~~~~~~~~ 152 (449)
T 2gwd_A 74 KVMEGDKIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGMGFQPKWRREDIPTMP 152 (449)
T ss_dssp EEEETTEEEEEEETTEEEEECTT-CCEEEECCCBSSHHHHHHHHHHHHHHHHHHHHHHTEEEECCSBCSSCCGGGSCCCS
T ss_pred ccccccccccccCCCceEEecCC-ceEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCceeeccCCCCCCccccCCCC
Confidence 1 11667776 99999999985 56789999999999999999999764 23333
Q ss_pred -CC----------CCCCC-------CceeeeccccccccCCCchHHHHHHHHHHHHhHHHHhhcccccc
Q 014226 294 -PI----------EGDWN-------GAGCHTNYSTKSMREEGGYETIKKAILNLSLRHKEHISAYGEGN 344 (428)
Q Consensus 294 -P~----------~~~~~-------GsG~H~H~SL~~~~~~~g~~~~~~fiaGl~L~h~~al~a~~~nS 344 (428)
|. .+ .. -+|+|+|+++.+. ..+-..+..+ +...|.++|+++||
T Consensus 153 ~~RY~~m~~~~~~~g-~~g~~mm~~~~g~qVhl~~~~~------~~~~~~~~~~-~~~~P~llALsAnS 213 (449)
T 2gwd_A 153 KGRYDIMRNYMPKVG-SLGLDMMLRTCTVQVNLDFSSE------ADMIRKFRAG-LALQPIATALFANS 213 (449)
T ss_dssp CHHHHHHHHHGGGTC-SSHHHHHHHBCEEEEEECCSSH------HHHHHHHHHH-HHHHHHHHHHHCCB
T ss_pred chHHHHHHHHHHHhc-hhHHHHhhcceeeEEEecCCCH------HHHHHHHHHH-HHHHHHHHHHHhCC
Confidence 21 12 12 4789999999652 1222334455 78889999988754
No 13
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=95.29 E-value=0.53 Score=51.59 Aligned_cols=99 Identities=14% Similarity=-0.025 Sum_probs=59.1
Q ss_pred eccCCCCCCcEEEEeCCCc-HHHHhHHHHHHHHHHHHHH-HHcCCeEeecc-c------CCCC-----------------
Q 014226 244 GTNGEVMPGQWEYQVGPSV-GIDAGDHIWCSRYLLERIT-EQAGVVLSLDP-K------PIEG----------------- 297 (428)
Q Consensus 244 ~~h~E~gpGQ~Ei~l~~~~-~l~aAD~~~~~K~~ik~vA-~~hGl~ATFmp-K------P~~~----------------- 297 (428)
.+.+|..-.|.|+...++. .-++-+.+...+.++.+.+ ....+-+.=|| . |+..
T Consensus 54 ~i~~d~~es~lE~~Tpv~~~~~~~~~~L~~l~~~~~~~~~~~e~lw~~smp~~l~~~~i~ia~~~~~~~~~Yr~~l~~ry 133 (750)
T 3ln6_A 54 YIQTDYSEPQLELITPIAKDSQEAIRFLKAISDVAGRSINHDEYLWPLSMPPKVREEDIQIAQLEDAFEYDYRKYLEKTY 133 (750)
T ss_dssp SEEESSBSSEEEEECCCBSSHHHHHHHHHHHHHHHHHHSCTTEEECCSSSCSSCCTTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CccchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeecCCCCCCCCCCCcccCCCCCcHHHHHHHHHHh
Confidence 4667788888888888874 5567777777777776664 33333222222 1 2221
Q ss_pred ---CCCCceeeecccccccc--------CCCchHHHH-----HHHHHHHHhHHHHhhccccc
Q 014226 298 ---DWNGAGCHTNYSTKSMR--------EEGGYETIK-----KAILNLSLRHKEHISAYGEG 343 (428)
Q Consensus 298 ---~~~GsG~H~H~SL~~~~--------~~~g~~~~~-----~fiaGl~L~h~~al~a~~~n 343 (428)
.+.=+|+|+|+|+-+.. +......++ ..+-++ +.+.|.|++++.+
T Consensus 134 g~~~q~i~G~Hvn~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~l~r~~-~r~~w~l~~L~ga 194 (750)
T 3ln6_A 134 GKLIQSISGIHYNLGLGQELLTSLFELSQADNAIDFQNQLYMKLSQNF-LRYRWLLTYLYGA 194 (750)
T ss_dssp CTGGGGCCCEEEEEEECHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHH-HHHHHHHHHHTCC
T ss_pred ChhhceeeeEEEEecCChHHHHHHhhccccchHHHHhhhHHHHHHHHH-HhHHHHHHHHhhC
Confidence 01225899999997631 001112222 235567 8899999999853
No 14
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=82.24 E-value=3.9 Score=44.83 Aligned_cols=97 Identities=15% Similarity=0.055 Sum_probs=54.2
Q ss_pred eccCCCCCCcEEEEeCCC-cHHHHhHHHHHHHHHHHHHH-HHcCCeEeec----cc----CCCCCC--------------
Q 014226 244 GTNGEVMPGQWEYQVGPS-VGIDAGDHIWCSRYLLERIT-EQAGVVLSLD----PK----PIEGDW-------------- 299 (428)
Q Consensus 244 ~~h~E~gpGQ~Ei~l~~~-~~l~aAD~~~~~K~~ik~vA-~~hGl~ATFm----pK----P~~~~~-------------- 299 (428)
.+.+|..-.|.|+...++ +.-++-+.+-..+.++.+.+ ....+-+.=| |. |+.. |
T Consensus 53 ~i~td~ses~lE~iTpv~~~~~~~~~~L~~l~~~~~~~~~~~e~lwp~smp~~l~~~~~ip~a~-~~~~~~~~Yr~~L~~ 131 (757)
T 3ln7_A 53 YIQTDFAESQLELITPPTKKLEDTFRWLSVIHEVVQRSLPEEEYIFPLSMPAGLPAEEQIRVAQ-LDNPEDVAYREYLVK 131 (757)
T ss_dssp SEECSSSTTEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCTTEECCCSSSCSBCCC---CCCCC-CSSHHHHHHHHHHHH
T ss_pred CCCchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCcCCCCCCCCccc-cCCCccHHHHHHHHH
Confidence 355666777777777775 35556666666666666554 2233222222 11 3332 1
Q ss_pred -------CCceeeecccccccc--------CC-CchHHHH-----HHHHHHHHhHHHHhhcccc
Q 014226 300 -------NGAGCHTNYSTKSMR--------EE-GGYETIK-----KAILNLSLRHKEHISAYGE 342 (428)
Q Consensus 300 -------~GsG~H~H~SL~~~~--------~~-~g~~~~~-----~fiaGl~L~h~~al~a~~~ 342 (428)
.=+|+|+|+|+-+.. ++ .....++ +.+-++ +++.+.|++++.
T Consensus 132 ryG~~~q~i~GiH~n~s~~~~~~~~l~~~~~~~~~~~~~~~~~Y~~l~r~~-~r~~wll~yL~g 194 (757)
T 3ln7_A 132 IYGKNKQMVSGIHYNFQLSPDLITRLFRLQNEYQSAVDFQNDLYLKMAKNF-LRYQWILLYLLA 194 (757)
T ss_dssp HHCSHHHHCCCCEEEEEECHHHHHHHHHHCTTTCSHHHHHHHHHHHHHHHH-HHHHHHHHHHTC
T ss_pred HhchhhceeeeEEEEEecChHHHHHHhhhcccchhHHHHHhHHHHHHHHhh-HhHHHHHHHHhh
Confidence 125999999997631 11 1122232 235566 889999998875
No 15
>1nxi_A Conserved hypothetical protein VC0424; structural genomics, AB sandwich, COG 3076, ATCC NO. 51394D, NESG target OP3, PSI; NMR {Vibrio cholerae} SCOP: d.58.47.1
Probab=80.16 E-value=5.9 Score=33.80 Aligned_cols=90 Identities=13% Similarity=0.036 Sum_probs=60.4
Q ss_pred HHHHHhhhcccccceEeeeeeEEEecCCCCCCCCCCCCCCCCCCCCcccccCcChhhHHHHHHHHHHHHHHcCCceeecc
Q 014226 167 AEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTN 246 (428)
Q Consensus 167 kr~l~~l~~~G~~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~Gi~ve~~h 246 (428)
+++++.|++.|..+..-.++||++.-++.. -+..+.. .+...|..|+...
T Consensus 22 ~~Vl~~L~e~Gddl~~~r~IEH~~~F~de~--------------------------~~e~~a~----~~~~~Gy~v~~~~ 71 (132)
T 1nxi_A 22 RDIIQALLEDGSDPDALYEIEHHLFAEDFD--------------------------KLEKAAV----EAFKMGFEVLEAE 71 (132)
T ss_dssp HHHHHHHHHHTCCTTSCEEEEEEEEESCHH--------------------------HHHHHHH----HHHHHTCCCBCCC
T ss_pred HHHHHHHHhCCCCcCCCeEEEEEEEeCCHH--------------------------HHHHHHH----HHHHCCCEEEecc
Confidence 677888888999999999999999854411 0233333 3567899887432
Q ss_pred C---CCCCCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCe
Q 014226 247 G---EVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVV 287 (428)
Q Consensus 247 ~---E~gpGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ 287 (428)
. |.|-..|++.+.-...+...+=.-...++.+ +|+++|-.
T Consensus 72 ~~e~e~g~~~~~~~i~~~~~l~~~~I~~~~~~L~~-lA~~~~G~ 114 (132)
T 1nxi_A 72 ETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVN-LAEKFDII 114 (132)
T ss_dssp CBCCSSCSSBEEEEEEEEECSCHHHHHHHHHHHHH-HHHHHTCE
T ss_pred cccCCCCceeEEEEEEEeccCCHHHHHHHHHHHHH-HHHHhCcE
Confidence 2 4443579999988877776554444455554 77777654
No 16
>2fao_A Probable ATP-dependent DNA ligase; polymerase, primase, NHEJ, hydrolase/transferase complex; 1.50A {Pseudomonas aeruginosa} PDB: 2faq_A* 2far_A*
Probab=78.61 E-value=12 Score=36.48 Aligned_cols=126 Identities=13% Similarity=0.203 Sum_probs=78.1
Q ss_pred HHHcC-CceeeccCCCC----CCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeecccCCCCCCCCceeeeccc
Q 014226 235 CLYAG-INISGTNGEVM----PGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYS 309 (428)
Q Consensus 235 l~~~G-i~ve~~h~E~g----pGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFmpKP~~~~~~GsG~H~H~S 309 (428)
+.++| |++..+..-.+ |.+.=|+|.|.+++.-.|-+-.++. +|++-.+.||. +| ||-. -|.|+|+.+-
T Consensus 111 ~aq~~~lE~H~w~~~~~~~~~PD~lvfDLDP~~~~~f~~v~~aA~~-~r~~L~~lGL~-~f-~KTS----GgkGlHV~vP 183 (309)
T 2fao_A 111 AVQMGSIEFHTWNASLANLERPDRFVLDLDPDPALPWKRMLEATQL-SLTLLDELGLR-AF-LKTS----GGKGMHLLVP 183 (309)
T ss_dssp HHHTTEEEEEECSSCTTCTTSCSEEEEEEEECTTSCHHHHHHHHHH-HHHHHHHHTCC-CE-EEEC----SSSSEEEEEE
T ss_pred HHHhCcEEeeCCcccCCCCCCCCEEEEECCCCcCCCHHHHHHHHHH-HHHHHHHcCCc-ee-eEcc----CCCeeEEEEE
Confidence 44566 66666655443 8999999999988776555544444 89999999996 45 7721 3599999999
Q ss_pred cccccCCCchHHHHHHHHHHHHhHHHHhh--cccccccccCCCCCCCCCCCceeeccCCCcceeeeccC
Q 014226 310 TKSMREEGGYETIKKAILNLSLRHKEHIS--AYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRE 376 (428)
Q Consensus 310 L~~~~~~~g~~~~~~fiaGl~L~h~~al~--a~~~nSYkRl~p~~~ap~~~~~~WG~~NRsa~iRvp~~ 376 (428)
|... -+....+.|--.+ -+++.... .++...-|....|. . ++.|..|+|...+--|.+
T Consensus 184 l~~~---~~~~~vr~fa~~~-A~~l~~~~Pd~~t~~~~k~~R~gk---I--fiDy~qN~~g~T~vapYS 243 (309)
T 2fao_A 184 LERR---HGWDEVKDFAQAI-SQHLARLMPERFSAVSGPRNRVGK---I--FVDYLRNSRGASTVAAYS 243 (309)
T ss_dssp CCSC---SCHHHHHHHHHHH-HHHHHHHCTTTEECSCSGGGSTTS---E--EEECGGGSTTCCEECTTC
T ss_pred cCCC---CCHHHHHHHHHHH-HHHHHHhCcceeehhhhHhhCCCC---E--EEeCccCCCCCeEEccCC
Confidence 9642 2334444444444 33343332 23334444444432 2 778887777776665544
No 17
>2iru_A Putative DNA ligase-like protein RV0938/MT0965; polymerase, primase, NHEJ, transferase; 1.65A {Mycobacterium tuberculosis} PDB: 2irx_A* 2iry_A* 2r9l_A* 3pky_A*
Probab=66.30 E-value=12 Score=36.50 Aligned_cols=126 Identities=8% Similarity=0.064 Sum_probs=75.7
Q ss_pred HHHcC-CceeeccCCC-C-----------CCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeecccCCCCCCCC
Q 014226 235 CLYAG-INISGTNGEV-M-----------PGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNG 301 (428)
Q Consensus 235 l~~~G-i~ve~~h~E~-g-----------pGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFmpKP~~~~~~G 301 (428)
+.++| |++.-+..-. + |.+.-|+|.|.+++.-.|-+-. =..+|++-.+.||.+ | ||-. -|
T Consensus 105 ~aq~g~lE~H~w~~r~~~~~~~~~~~~~~PD~lvfDLDP~~~~~f~~v~~a-A~~~r~~L~~lGL~~-f-~KTS----Gg 177 (303)
T 2iru_A 105 IAQQAALEVHVPQWRFVAEPGSGELNPGPATRLVFDLDPGEGVMMAQLAEV-ARAVRDLLADIGLVT-F-PVTS----GS 177 (303)
T ss_dssp HHHTTCCEEEECSEEEEECTTTCCEEEEEEEEEEEEEEECTTCCHHHHHHH-HHHHHHHHHTTTCCC-E-EEEC----SS
T ss_pred HHHhCcEeeeCCccccccccccccCCCCCCCEEEEECCCCCCCCHHHHHHH-HHHHHHHHHHcCCcc-c-eEcc----CC
Confidence 34565 6666554333 2 6788899999987665544433 445889999999874 5 7722 36
Q ss_pred ceeeeccccccccCCCchHHHHHHHHHHHHhHHHHhh--cccccccccCCCCCCCCCCCceeeccCCCcceeeeccC
Q 014226 302 AGCHTNYSTKSMREEGGYETIKKAILNLSLRHKEHIS--AYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRE 376 (428)
Q Consensus 302 sG~H~H~SL~~~~~~~g~~~~~~fiaGl~L~h~~al~--a~~~nSYkRl~p~~~ap~~~~~~WG~~NRsa~iRvp~~ 376 (428)
.|+|+.+-|... -+....+.|--.+ -.++..-. .++...-|....|- . ++.|..|+|...+=-|.+
T Consensus 178 kGlHV~vPl~~~---~~~~~vr~fa~~~-A~~l~~~~Pd~~t~~~~k~~R~gk---I--fvDy~qN~~g~T~vapYS 245 (303)
T 2iru_A 178 KGLHLYTPLDEP---VSSRGATVLAKRV-AQRLEQAMPALVTSTMTKSLRAGK---V--FVDWSQNSGSKTTIAPYS 245 (303)
T ss_dssp SCEEEEEEEEEE---ECHHHHHHHHHHH-HHHHHHHCTTTEESSCCGGGCTTS---E--EEECGGGSTTCCEECTTC
T ss_pred CeEEEEEEcCCC---CCHHHHHHHHHHH-HHHHHHHCcceehhhhhHHhCCCC---E--EEECccCCCCCeeEecCc
Confidence 899999999642 2233344444444 33333332 23444445555442 2 788888888776555543
No 18
>1va6_A Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} SCOP: d.128.1.4 PDB: 1v4g_A* 2d32_A* 2d33_A*
Probab=64.84 E-value=15 Score=38.33 Aligned_cols=17 Identities=18% Similarity=0.132 Sum_probs=14.9
Q ss_pred ccceEeeeeeEEEecCC
Q 014226 178 EVPWFGIEQEYTLLQQN 194 (428)
Q Consensus 178 ~~~~~g~E~EF~L~~~~ 194 (428)
..+.+|+|-|+..++++
T Consensus 20 ~~~~~GIE~E~lrVd~~ 36 (518)
T 1va6_A 20 KGIQRGLERETLRVNAD 36 (518)
T ss_dssp TTCEEEEEEEEEEECTT
T ss_pred hcCCcceEeeeeEECCC
Confidence 36889999999999886
No 19
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=54.31 E-value=7.4 Score=29.83 Aligned_cols=65 Identities=14% Similarity=0.114 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHcCCceeeccCCCCCCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeeccc
Q 014226 227 IADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPK 293 (428)
Q Consensus 227 i~~~l~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFmpK 293 (428)
++.++...+.+.|++|..++.....|.+.+.+.-.-. ..+++-.++.-+++++.++|+..++.+.
T Consensus 18 ila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~~~~l~~l~~~L~~~~~~~~~~~~~~~~ 82 (91)
T 1zpv_A 18 IVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--EKQDFTYLRNEFEAFGQTLNVKINIQSA 82 (91)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SCCCHHHHHHHHHHHHHHHTEEEEEEEG
T ss_pred HHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--CCCCHHHHHHHHHHHHHHcCCEEEEeeH
Confidence 3344444567899999988877656777766654211 1224445678889999999999888654
No 20
>3nzt_A Glutamate--cysteine ligase; structural genomics, center for structural genomics of infec diseases, csgid, alpha and beta proteins; HET: AMP; 2.00A {Francisella tularensis subsp}
Probab=47.05 E-value=51 Score=34.42 Aligned_cols=18 Identities=22% Similarity=0.089 Sum_probs=15.3
Q ss_pred cccceEeeeeeEEEecCC
Q 014226 177 AEVPWFGIEQEYTLLQQN 194 (428)
Q Consensus 177 G~~~~~g~E~EF~L~~~~ 194 (428)
-..+.+|+|-|+..++++
T Consensus 30 ~~~~~~GIE~E~lRVd~~ 47 (525)
T 3nzt_A 30 KINNLRGIERETLRVTDC 47 (525)
T ss_dssp SCCCEEEEEEEEEEEETT
T ss_pred CCCCCcceEeeeeEECCC
Confidence 357889999999999875
No 21
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=30.23 E-value=54 Score=27.19 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHcCCceeeccC-------C----CCCCcEEEEeCCCc-----HHH---HhHHHHHHHHHHHHHHHHcC
Q 014226 225 RDIADAHYKACLYAGINISGTNG-------E----VMPGQWEYQVGPSV-----GID---AGDHIWCSRYLLERITEQAG 285 (428)
Q Consensus 225 ~~i~~~l~~~l~~~Gi~ve~~h~-------E----~gpGQ~Ei~l~~~~-----~l~---aAD~~~~~K~~ik~vA~~hG 285 (428)
.+|+.+|.++|.++||+.+.-.. + .+.-|||+.+--.+ ++. ..=+.+.||.++..|..+..
T Consensus 40 ~eIm~eI~rvL~~~gi~~~~~g~y~l~C~~~~~~~~~~v~fElEVckl~~~~l~gV~~kRi~Gd~~~yk~lc~~il~~L~ 119 (120)
T 3ose_A 40 NDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELK 119 (120)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEETTEEEEEESCTTTTCCEEEEEEEEEEGGGTEEEEEEEEEESCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCCEEEEcCCEEEEEEecCCCCCccEEEEEEEEEecCCCceeEEEEecCCCHHHHHHHHHHHHHHhc
Confidence 88999999999999998886331 1 12357888764432 111 22255688999999988765
Q ss_pred C
Q 014226 286 V 286 (428)
Q Consensus 286 l 286 (428)
|
T Consensus 120 L 120 (120)
T 3ose_A 120 L 120 (120)
T ss_dssp C
T ss_pred C
Confidence 3
No 22
>1v5s_A MAP/microtubule affinity-regulating kinase 3; Ka1 domain, ELKL motif, MARK3, phosphorylation, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.129.6.1
Probab=28.09 E-value=1.1e+02 Score=25.64 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHcCCceee---c-----cCCC---CCCcEEEEeCCCcHH-----H---HhHHHHHHHHHHHHHHHHcC
Q 014226 225 RDIADAHYKACLYAGINISG---T-----NGEV---MPGQWEYQVGPSVGI-----D---AGDHIWCSRYLLERITEQAG 285 (428)
Q Consensus 225 ~~i~~~l~~~l~~~Gi~ve~---~-----h~E~---gpGQ~Ei~l~~~~~l-----~---aAD~~~~~K~~ik~vA~~hG 285 (428)
.+|+.+|++.|.+.||+.+. + |... ..=||||.+---+.+ . ..-+.+.||.+..+|..+..
T Consensus 40 ~eIm~EI~rvL~~~~i~~k~~~~y~L~C~~~~~~~~~~vkfEiEVcKvp~l~l~GI~fKRisGd~w~YK~lc~~IL~eLk 119 (126)
T 1v5s_A 40 GDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELK 119 (126)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEETTEEEEEECSSSTTTCEEEEEECCCCTTTCSCCCEEEEEESCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCcEEEECCEEEEEEECCCCCCceEEEEEEEEEecCCCceeEEEeeccCchhHHHHHHHHHHHHHh
Confidence 88999999999999998886 1 2111 123899987643211 1 22255899999999999887
Q ss_pred C
Q 014226 286 V 286 (428)
Q Consensus 286 l 286 (428)
+
T Consensus 120 L 120 (126)
T 1v5s_A 120 L 120 (126)
T ss_dssp C
T ss_pred c
Confidence 5
No 23
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=22.48 E-value=71 Score=28.26 Aligned_cols=67 Identities=18% Similarity=0.040 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHcCCceeeccCCC------CCCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeecccC
Q 014226 225 RDIADAHYKACLYAGINISGTNGEV------MPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKP 294 (428)
Q Consensus 225 ~~i~~~l~~~l~~~Gi~ve~~h~E~------gpGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFmpKP 294 (428)
-.|+.++.+.|.+.|++|..++.-. +.+.|-+.+.-.-+ ...| -.+|..+..+|.++|+...|.|--
T Consensus 104 pGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~-~~~~--~~l~~~l~~~a~~l~~di~~~~~~ 176 (195)
T 2nyi_A 104 EGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP-FPLY--QEVVTALSRVEEEFGVDIDLEEVV 176 (195)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE-GGGH--HHHHHHHHHHHHHHTCEEEEEECC
T ss_pred cCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC-CCcc--HHHHHHHHHHHHHcCeEEEEEECc
Confidence 4566666677889999998766543 44777666654422 2233 567888999999999999998753
No 24
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=20.74 E-value=3.5e+02 Score=23.29 Aligned_cols=65 Identities=14% Similarity=0.087 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHcCCceeeccCCCCCCcEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeeccc
Q 014226 226 DIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPK 293 (428)
Q Consensus 226 ~i~~~l~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFmpK 293 (428)
.++.++...|.+.|++|....--...|+|=+.+.-..+. +..-.++..+..++.+.|+...+-+.
T Consensus 18 Giva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~---~~~~~l~~~L~~~~~~~~~~~~~~~~ 82 (192)
T 1u8s_A 18 GICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP---SNITRVETTLPLLGQQHDLITMMKRT 82 (192)
T ss_dssp THHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH---HHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred cHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC---CCHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 455566667889999998866555567776554433222 35556788888999999999887644
No 25
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=20.66 E-value=1.2e+02 Score=29.33 Aligned_cols=66 Identities=11% Similarity=0.034 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHcCCceeeccCCCCCC--cEEEEeCCCcHHHHhHHHHHHHHHHHHHHHHcCCeEeecccCCCC
Q 014226 225 RDIADAHYKACLYAGINISGTNGEVMPG--QWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEG 297 (428)
Q Consensus 225 ~~i~~~l~~~l~~~Gi~ve~~h~E~gpG--Q~Ei~l~~~~~l~aAD~~~~~K~~ik~vA~~hGl~ATFmpKP~~~ 297 (428)
.++.. |.+.+++.||.+--+.++.=|- ..|+.+.+ .|.+.-.=.-|.++|+++|+..||.|=+|.-
T Consensus 60 ~~l~~-il~~n~~~~I~~yRiSS~l~P~~thp~~~~~~------~~~~~~~l~~iG~~a~~~~iRLS~HPgqF~v 127 (310)
T 3tc3_A 60 LCLKN-ILEWNLKHEILFFRISSNTIPLASHPKFHVNW------KDKLSHILGDIGDFIKENSIRISMHPGQYVV 127 (310)
T ss_dssp HHHHH-HHHHHHHTTCCEEECCTTSSTTTTSTTCCCCH------HHHTHHHHHHHHHHHHHTTCEEEECCCTTCC
T ss_pred HHHHH-HHHHHHHcCCEEEEeCcccCCCccccccccch------HHHHHHHHHHHHHHHHHcCcEEEecCCCCcc
Confidence 34433 4457889999999988877662 22222211 1222222345788899999999999999975
Done!