RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 014226
(428 letters)
>gnl|CDD|178603 PLN03036, PLN03036, glutamine synthetase; Provisional.
Length = 432
Score = 886 bits (2290), Expect = 0.0
Identities = 392/432 (90%), Positives = 415/432 (96%), Gaps = 4/432 (0%)
Query: 1 MAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDST 60
MAQILAPS Q QMR+PK S +A+PMT+K+WSSL++KQ KKGT + S KFRVLAL+SE+ST
Sbjct: 1 MAQILAPSPQCQMRVPKNSAVAAPMTSKLWSSLVLKQKKKGTAKVSGKFRVLALQSENST 60
Query: 61 VNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKS----KPVEHPSELPKWNYDGSST 116
VNR+EDLLNLD TPYTD+IIAEYIWIGG+GID+RSKS KPVEHPSELPKWNYDGSST
Sbjct: 61 VNRVEDLLNLDTTPYTDRIIAEYIWIGGSGIDLRSKSRTISKPVEHPSELPKWNYDGSST 120
Query: 117 GQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVS 176
GQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSN KV
Sbjct: 121 GQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNKKVV 180
Query: 177 AEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACL 236
EVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDI+DAHYKACL
Sbjct: 181 DEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAHYKACL 240
Query: 237 YAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIE 296
YAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRY+LERITEQAGVVL+LDPKPIE
Sbjct: 241 YAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYILERITEQAGVVLTLDPKPIE 300
Query: 297 GDWNGAGCHTNYSTKSMREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETAS 356
GDWNGAGCHTNYSTKSMREEGG+E IKKAILNLSLRHKEHISAYGEGNERRLTGKHETAS
Sbjct: 301 GDWNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETAS 360
Query: 357 IDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPTLEA 416
ID+FSWGVANRGCSIRVGR+TEK+GKGYLEDRRPASNMDPY+VTSLLAETTILWEPTLEA
Sbjct: 361 IDTFSWGVANRGCSIRVGRDTEKKGKGYLEDRRPASNMDPYIVTSLLAETTILWEPTLEA 420
Query: 417 EALAAQKLALNV 428
EALAAQKL+LNV
Sbjct: 421 EALAAQKLSLNV 432
>gnl|CDD|177922 PLN02284, PLN02284, glutamine synthetase.
Length = 354
Score = 727 bits (1879), Expect = 0.0
Identities = 286/351 (81%), Positives = 318/351 (90%), Gaps = 4/351 (1%)
Query: 64 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSK----PVEHPSELPKWNYDGSSTGQA 119
L DL+NL+++ TDKIIAEYIWIGG+G+D+RSK++ PV PS+LPKWNYDGSSTGQA
Sbjct: 4 LSDLINLNLSDSTDKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSSTGQA 63
Query: 120 PGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEV 179
PGEDSEVILYPQAIFKDPFRGGNNILV+CD YTPAGEPIPTNKR +AA+IFS+ V+AE
Sbjct: 64 PGEDSEVILYPQAIFKDPFRGGNNILVMCDAYTPAGEPIPTNKRAKAAKIFSHPDVAAEE 123
Query: 180 PWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAG 239
PW+GIEQEYTLLQ++VKWPLGWPVG YPGPQGPYYCG GADK+FGRDI DAHYKACLYAG
Sbjct: 124 PWYGIEQEYTLLQKDVKWPLGWPVGGYPGPQGPYYCGVGADKAFGRDIVDAHYKACLYAG 183
Query: 240 INISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDW 299
INISG NGEVMPGQWE+QVGP VGI AGD +W +RY+LERITE AGVV+S DPKPI GDW
Sbjct: 184 INISGINGEVMPGQWEFQVGPVVGISAGDQLWVARYILERITEIAGVVVSFDPKPIPGDW 243
Query: 300 NGAGCHTNYSTKSMREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDS 359
NGAG HTNYSTKSMRE+GGYE IKKAI L LRHKEHI+AYGEGNERRLTGKHETA I++
Sbjct: 244 NGAGAHTNYSTKSMREDGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETADINT 303
Query: 360 FSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILW 410
FSWGVANRG SIRVGR+TEK+GKGY EDRRPASNMDPYVVTS++AETTILW
Sbjct: 304 FSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW 354
>gnl|CDD|215731 pfam00120, Gln-synt_C, Glutamine synthetase, catalytic domain.
Length = 259
Score = 252 bits (647), Expect = 3e-82
Identities = 81/263 (30%), Positives = 123/263 (46%), Gaps = 20/263 (7%)
Query: 159 PTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAG 218
P + R + P+FG EQE+ L +V+ G P G YP P+GPYY G
Sbjct: 1 PRDPRSILKRALARLASLGYTPYFGPEQEFFLFD-DVRPGGGPPPGGYPDPRGPYYGGYF 59
Query: 219 ADKS--FGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYL 276
RDI KA AGI + G + EV PGQ E + + ++A D++ +Y+
Sbjct: 60 PVAPLDEARDIRRDIVKALEAAGIPVEGIHHEVAPGQHEIDLRFADALEAADNLQLFKYV 119
Query: 277 LERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMR--------EEGGYETIKKAILN 328
++R+ E+ G+ + PKPI GD NG+G HT+ S + +G + A
Sbjct: 120 VKRVAEKHGLTATFMPKPIFGD-NGSGMHTHQSLWDRKDGKNLFADGDGYAGLSETARHF 178
Query: 329 LS--LRHKEHISAY---GEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKG 383
+ L+H I+AY + +RL T + +WGV NR SIR+ R + G
Sbjct: 179 IGGILKHAPAITAYTAPTVNSYKRLVP--GTEAPVYIAWGVRNRSASIRIPRGGGPKA-G 235
Query: 384 YLEDRRPASNMDPYVVTSLLAET 406
+EDR P + +PY+ + L
Sbjct: 236 RVEDRLPDPDANPYLALAALLAA 258
>gnl|CDD|223252 COG0174, GlnA, Glutamine synthetase [Amino acid transport and
metabolism].
Length = 443
Score = 214 bits (548), Expect = 4e-65
Identities = 84/350 (24%), Positives = 133/350 (38%), Gaps = 27/350 (7%)
Query: 77 DKIIAEYIWIGGTGIDMRSKSKPVEHPSE----LPKWNY--DGSSTGQAPG-EDSEVILY 129
+ + G+ +R K+ P E P L + DGSS G +S+++L
Sbjct: 14 GVKFVDLRFTDLNGV-LRGKTIPAEKPVSVLAQLFEGGVVFDGSSIAGFEGIGESDMVLK 72
Query: 130 P--QAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVP-WFGIEQ 186
P + DP+R G V+CD Y P G P P + R + K P G E
Sbjct: 73 PDLSTLVVDPWREGPTARVLCDVYDPDGTPYPRDPRSVLKRALARLKDEGLAPAVVGPEL 132
Query: 187 EYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTN 246
E+ L + P +G Y+ A D+ D +A AGI I +
Sbjct: 133 EFFLFDR-DGRDPDGG---RPADKGGYFDVAPLDE--AEDFRRDIVEALEAAGIEIEAIH 186
Query: 247 GEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGD-WNGAGCH 305
EV PGQ+E + + A D I +Y+++ + E+ G+ + PKP GD +G H
Sbjct: 187 HEVAPGQFEINLRFDDALKAADQIVIFKYVVKEVAEKHGLTATFMPKPFFGDNGSGMHVH 246
Query: 306 TNYSTKS-----MREEGGY---ETIKKAILNLSLRHKEHISAYGEG-NERRLTGKHETAS 356
+ K E+G ET I + + N + G +
Sbjct: 247 QSLWDKDGGNLFADEDGYAGLSETALHFIGGILKHAPALTAITAPTVNSYKRLGVPYEWA 306
Query: 357 IDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAET 406
+WGV NR S+R+ +E R P + +PY+ + +
Sbjct: 307 PTYIAWGVRNRSASVRIPASGANGKARRVEFRVPDPDANPYLAFAAILAA 356
>gnl|CDD|217811 pfam03951, Gln-synt_N, Glutamine synthetase, beta-Grasp domain.
Length = 84
Score = 80.2 bits (199), Expect = 7e-19
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 77 DKIIAEYIWIGGTGI--DMRSK-SKPVEHPSELPKWNYDGSST-GQAPGEDSEVILYP-- 130
+ + G +R ++ E E +DGSS G AP +S++ L P
Sbjct: 1 GVKFVDLRFTDILGRLKHVRIPATELDEDAFEEG-IGFDGSSIEGFAPINESDMYLKPDP 59
Query: 131 QAIFKDPFRG--GNNILVICDTYTP 153
+ DPFR G VICD Y P
Sbjct: 60 STAYIDPFRPDPGKTARVICDVYDP 84
>gnl|CDD|233073 TIGR00653, GlnA, glutamine synthetase, type I. Alternate name:
glutamate--ammonia ligase. This model represents the
dodecameric form, which can be subdivided into 1-alpha
and 1-beta forms. The phylogeny of the 1-alpha and
1-beta forms appears polyphyletic. E. coli,
Synechocystis PCC6803, Aquifex aeolicus, and the
crenarcheon Sulfolobus acidocaldarius have form 1-beta,
while Bacillus subtilis, Thermotoga maritima, and
various euryarchaea has form 1-alpha. The 1-beta
dodecamer from the crenarcheon Sulfolobus acidocaldarius
differs from that in E. coli in that it is not regulated
by adenylylation [Amino acid biosynthesis, Glutamate
family].
Length = 459
Score = 72.4 bits (178), Expect = 1e-13
Identities = 79/321 (24%), Positives = 122/321 (38%), Gaps = 41/321 (12%)
Query: 111 YDGSS-TGQAPGEDSEVILYPQA--IFKDPFRGGNNILVICDTYTPA-GEPIPTNKRHRA 166
+DGSS G E+S+++L P DP+R + VICD Y P GEP + R A
Sbjct: 47 FDGSSIRGFQGIEESDMLLKPDPSTAVIDPWRAEKTLRVICDVYEPFTGEPYERDPRSIA 106
Query: 167 AEIFSNSKVS-AEVPWFGIEQEYTLLQQNVKWPLGWPV------------------GAYP 207
K + +FG E E+ L L G P
Sbjct: 107 KRAEEYLKSGIGDTAYFGPEPEFFLFDSVEFGSLANGSFYEVDSEEGRWNEESGNRGYKP 166
Query: 208 GPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAG 267
+G Y+ A D DI G ++ + EV GQ E +
Sbjct: 167 RDKGGYFPVAPTDT--AVDIRREMVLYLEQLGFDVEVHHHEVATGQHEIDFKFDTLLKTA 224
Query: 268 DHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMRE--------EGGY 319
D I +Y+++ + + G + PKP+ GD NG+G H + S E G
Sbjct: 225 DDIQTYKYVVKNVARKHGKTATFMPKPLFGD-NGSGMHCHQSLWKDGENLFAGEEYAGLS 283
Query: 320 ETIKKAILNLSLRHKEHISAYGE---GNERRLTGKHETASIDSFSWGVANRGCSIRVGRE 376
ET I + L+H + ++A+ + +RL +E ++ NR IR+
Sbjct: 284 ETALYYIGGI-LKHAKALAAFTNPTVNSYKRLVPGYEAPVY--LAYSARNRSALIRIPAS 340
Query: 377 TEKQGKGYLEDRRPASNMDPY 397
+ K +E R P + +PY
Sbjct: 341 GNPKAK-RIEFRFPDPSANPY 360
>gnl|CDD|226477 COG3968, COG3968, Uncharacterized protein related to glutamine
synthetase [General function prediction only].
Length = 724
Score = 44.5 bits (105), Expect = 9e-05
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 17/157 (10%)
Query: 165 RAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWP------LGWPVGAYPGPQGP----YY 214
R + N+ G EQEY L+ + G + P P+G +Y
Sbjct: 201 RVLRLLGNTTSQKVFSNVGAEQEYFLVDKKSYDERPDLIFTGRTLFGAPPPKGQELDDHY 260
Query: 215 CGAGADK--SFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWC 272
GA ++ +F +D+ Y GI + EV PGQ+E G A DH
Sbjct: 261 FGAIPERVSAFMKDVEKELYA----LGIPAKTRHNEVAPGQFEIAPIFESGNLATDHQQL 316
Query: 273 SRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYS 309
+L++ + G+V L KP G NG+G H N+S
Sbjct: 317 VMEVLKKTALKHGLVCLLHEKPFAG-INGSGKHNNWS 352
>gnl|CDD|234109 TIGR03105, gln_synth_III, glutamine synthetase, type III. This
family consists of the type III isozyme of glutamine
synthetase, originally described in Rhizobium meliloti,
where types I and II also occur.
Length = 435
Score = 37.0 bits (86), Expect = 0.015
Identities = 70/355 (19%), Positives = 121/355 (34%), Gaps = 51/355 (14%)
Query: 79 IIAEYIWIGGTGIDMRSKSKPVEHPSELPK-----WNYDGSSTGQAPGEDSEVILYPQA- 132
+A ++ + G ++K P E + + GQ+P D +++ P
Sbjct: 13 FLASFVDLHGV---QKAKLVPAEAIDHMATGGAGFAGFAAWGLGQSP-ADPDLMAIPDLD 68
Query: 133 -IFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAE----VPWFGIEQE 187
+ + P++ G V D + G+P P R + A G+E E
Sbjct: 69 SLTQLPWQPGVA-WVAADLH-VNGKPYPQAPRV----VLKRQLAEAAELGLTLNTGVECE 122
Query: 188 YTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNG 247
+ LL+++ L P Y G + + D+ A G + +
Sbjct: 123 FFLLRRDEDGSLS-IADRADTLAKPCYDQRGLMRRY--DVLTEISDAMNALGWDPYQNDH 179
Query: 248 EVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTN 307
E GQ+E + + D RY+++ I E+ G+ + PKP D G GCH +
Sbjct: 180 EDANGQFEMNFTYADALTTADRHAFFRYMVKEIAEKHGMRATFMPKPFA-DLTGNGCHFH 238
Query: 308 YS-----------TKSMREEGGYETIKKAILNLSLRHKEHISA--------YGEGNERRL 348
S S G + + L H + A Y N R
Sbjct: 239 LSLWDEDGRNLFADDSDPNGLGLSKLAYHFIGGILHHAPALCAVLAPTVNSYKRLNAPR- 297
Query: 349 TGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLL 403
T T + + S+G NR +R+ G E R +PY+ + +
Sbjct: 298 TTSGATWAPNFISYGGNNRTHMVRI------PDPGRFELRLADGAANPYLAQAAI 346
>gnl|CDD|234289 TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype
II/NMENI. The CRISPR-associated protein Cas1 is
virtually universal to CRISPR systems. CRISPR, an
acronym for Clustered Regularly Interspaced Short
Palindromic Repeats, is a prokaryotic immunity system
for foreign DNA, mostly from phage. CRISPR systems
belong to different subtypes, distinguished by both
nature of the repeats, the makeup of the cohort of
associated Cas proteins, and by molecular phylogeny
within the more universal Cas proteins such as this one.
This model is of type EXCEPTION and provides more
specific information than the EQUIVALOG model TIGR00287.
It describes the Cas1 variant of the NMENI subtype of
CRISPR/Cas system.
Length = 278
Score = 28.8 bits (65), Expect = 4.7
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 142 NNILVI-CD-TYTPAGEPIPTNKRHRAAEIF 170
NNI +I CD + P G+ +P HR+ +
Sbjct: 58 NNIALIFCDEKHLPVGQLLPFYGHHRSLKRL 88
>gnl|CDD|226031 COG3500, COG3500, Phage protein D [General function prediction
only].
Length = 350
Score = 28.9 bits (65), Expect = 4.8
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 351 KHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILW 410
+ A +++ W VA RE GK L +R PA+ LL +
Sbjct: 207 RVTYADREAYGWVVAYYQLVRAAAREEVVSGKDSLGERLPAAAAADSAARLLL-HSRASA 265
Query: 411 EPTLEAEALAA 421
E L+A A AA
Sbjct: 266 EGALQAAAAAA 276
>gnl|CDD|187851 cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1.
CRISPR (Clustered Regularly Interspaced Short
Palindromic Repeats) and associated Cas proteins
comprise a system for heritable host defense by
prokaryotic cells against phage and other foreign DNA;
Cas1 is the most universal CRISPR system protein thought
to be involved in spacer intergration. Cas1 is
metal-dependent deoxyribonuclease, also binds RNA; Shown
to possess a unique fold consisting of a N-terminal
beta-strand domain and a C-terminal alpha-helical
domain.
Length = 275
Score = 28.8 bits (65), Expect = 6.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 142 NNILVI-CD-TYTPAGEPIPTNKRHRAAEIF 170
NNI +I CD + P G+ +P HR+ +
Sbjct: 58 NNIALIFCDEKHLPVGQLLPFYGHHRSLKRL 88
>gnl|CDD|233049 TIGR00608, radc, DNA repair protein radc. The genes in this family
for which the functions are known have an as yet porrly
defined role in determining sensitivity to DNA damaging
agents such as UV irradiation. This family is based on
the phylogenomic analysis of JA Eisen (1999, Ph.D.
Thesis, Stanford University) [DNA metabolism, DNA
replication, recombination, and repair].
Length = 218
Score = 28.2 bits (63), Expect = 6.4
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 118 QAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTN 161
G + V ++P+ IFK+ + + L++ + P+GEP P+
Sbjct: 136 VFIGTVNHVPVHPREIFKEALKLSASALILAHNH-PSGEPSPSQ 178
>gnl|CDD|234102 TIGR03075, PQQ_enz_alc_DH, PQQ-dependent dehydrogenase,
methanol/ethanol family. This protein family has a
phylogenetic distribution very similar to that coenzyme
PQQ biosynthesis enzymes, as shown by partial
phylogenetic profiling. Genes in this family often are
found adjacent to the PQQ biosynthesis genes themselves.
An unusual, strained disulfide bond between adjacent Cys
residues contributes to PQQ-binding, as does a Trp
residue that is part of a PQQ enzyme repeat (see
pfam01011). Characterized members include the
dehydrogenase subunit of a membrane-anchored, three
subunit alcohol (ethanol) dehydrogenase of Gluconobacter
suboxydans, a homodimeric ethanol dehydrogenase in
Pseudomonas aeruginosa, and the large subunit of an
alpha2/beta2 heterotetrameric methanol dehydrogenase in
Methylobacterium extorquens.
Length = 526
Score = 28.0 bits (63), Expect = 9.8
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 73 TPYTDKIIAEYIWIGGTGIDMRSKSKPVEHPSELPKWNYDGSSTGQAPG 121
P+ DK+ W TG+D++ +P+E P G PG
Sbjct: 341 EPFVDKVN----W--ATGVDLK-TGRPIEVPEARSTGAKKGKPVEVCPG 382
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.314 0.133 0.409
Gapped
Lambda K H
0.267 0.0833 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 21,714,087
Number of extensions: 2074063
Number of successful extensions: 1004
Number of sequences better than 10.0: 1
Number of HSP's gapped: 986
Number of HSP's successfully gapped: 14
Length of query: 428
Length of database: 10,937,602
Length adjustment: 100
Effective length of query: 328
Effective length of database: 6,502,202
Effective search space: 2132722256
Effective search space used: 2132722256
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (26.7 bits)