BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014232
(428 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 226/439 (51%), Gaps = 40/439 (9%)
Query: 1 MLQLGTILYSKGFSITVVHTDFNSPN--PSNHPK-------FSFQSIPEGL----ADDDI 47
+ +L +L+ +GF IT V+T++N S PK F+F+SIP+GL D D+
Sbjct: 25 LFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDV 84
Query: 48 YSGNIIAIIMHLNANCGAPFHKCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRS 107
S ++ + + N P+ + L ++ + C++ D M F AA + +L +
Sbjct: 85 -SQDVPTLCQSVRKNFLKPYCELLTRL-NHSTNVPPVTCLVSDCCMSFTIQAAEEFELPN 142
Query: 108 IILRTNSAATQISRIALLQLKEDGSIPLQDPSNLA--------DPVPRLQPLRFKDL-PF 158
++ ++SA + ++ + E G IP +D S L D +P L+ R KD+ F
Sbjct: 143 VLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDF 202
Query: 159 SQFGLPENFLQ--LIPKIYNVRTSKAVIWNTMNCIEXXXXXXXXXXCNIP-IFPVGPLHK 215
+ P + + I V ++ NT N +E IP I+P+GPL
Sbjct: 203 IRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSS--TIPSIYPIGPLPS 260
Query: 216 FAPSSP---------GSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGL 266
+P +L KEDT C+ WL ++ P SV+YV+ GS M ++L E AWGL
Sbjct: 261 LLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGL 320
Query: 267 YNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSH 326
N K+ FLW++RP S I F + + G + W PQ VL+H ++GGF +H
Sbjct: 321 ANCKKSFLWIIRPDLVIGGSVI--FSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTH 378
Query: 327 CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMV 386
CGWNST ESIC GVPM+C P F DQ R++ + W IG++++ ++++ E+ K + +++
Sbjct: 379 CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIA 438
Query: 387 EKEGQEMRQRAKNLKEDVE 405
+G++M+Q+A LK+ E
Sbjct: 439 GDKGKKMKQKAMELKKKAE 457
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 187/377 (49%), Gaps = 18/377 (4%)
Query: 38 IPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQMPADEIVCIIYDELMYFAE 97
I +G+ + +++G I F + +V + + + C++ D ++FA
Sbjct: 69 ISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAET--GRPVSCLVADAFIWFAA 126
Query: 98 SAANQLKLRSIILRTNSAATQISRIALLQLKED-GSIPLQDPSN-LADPVPRLQPLRFKD 155
A ++ + + T + + + + +++E G +Q + L + +P + +RF+D
Sbjct: 127 DMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSKVRFRD 186
Query: 156 LPFS-QFG-LPENFLQLIPKIYNVR-TSKAVIWNTMNCIEXXXXXXXXXXCNIPIFPVGP 212
L FG L F +++ ++ V + AV N+ ++ +GP
Sbjct: 187 LQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKT-YLNIGP 245
Query: 213 LHKFAPSSPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQP 272
+ +P ++ T C+ WL + P SV+Y+S G++ + E+ ++ L S+ P
Sbjct: 246 FNLI---TPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVP 302
Query: 273 FLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNST 332
F+W LR + LPEGF E G VV WAPQ +VL+H AVG F +HCGWNS
Sbjct: 303 FIWSLRDKARVH------LPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSL 356
Query: 333 LESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDL-EKGEVEKAVKQLMVEKEGQ 391
ES+ GVP+ICRP FGDQR++ R V V IG+++E + K + Q++ +++G+
Sbjct: 357 WESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGK 416
Query: 392 EMRQRAKNLKEDVELCI 408
++R+ + L+E + +
Sbjct: 417 KLRENLRALRETADRAV 433
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 123/212 (58%), Gaps = 17/212 (8%)
Query: 206 PIFPVGPLHKFAPSSPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWG 265
P++PVGPL E++ C+ WL+NQ SVLYVS GS ++ ++L E+A G
Sbjct: 235 PVYPVGPLVNIGKQEAKQ--TEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALG 292
Query: 266 LYNSKQPFLWVLRPSSTSASSG----------IELLPEGFEEAVGENGCVVK-WAPQKDV 314
L +S+Q FLWV+R S A+S + LP GF E + G V+ WAPQ V
Sbjct: 293 LADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQV 352
Query: 315 LSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQL----EN 370
L+H + GGF +HCGWNSTLES+ G+P+I P + +Q+++A +S R L+ +
Sbjct: 353 LAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDG 412
Query: 371 DLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKE 402
+ + EV + VK LM +EG+ +R + K LKE
Sbjct: 413 LVRREEVARVVKGLMEGEEGKGVRNKMKELKE 444
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 177/382 (46%), Gaps = 29/382 (7%)
Query: 31 PKFSFQSIPEGLADDDIYSGN----IIAIIMHLNANCGAPFHKCLVQMMKQQMPADEIVC 86
P + ++ +GL + SGN I I + N + + + K I C
Sbjct: 67 PNIKYYNVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKN------ITC 120
Query: 87 IIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKED-GSIPLQDPSNLADPV 145
++ D +F A ++ + + L T + ++ + ++E GS + D ++ D +
Sbjct: 121 LVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSI-DVL 179
Query: 146 PRLQPLRFKDLP---FSQFGLPENFLQLIPKI-YNVRTSKAVIWNTMNCIEXXXXXXXXX 201
P L+ DLP +P F ++ K+ + + AV N+ I
Sbjct: 180 PGFPELKASDLPEGVIKDIDVP--FATMLHKMGLELPRANAVAINSFATIHPLIENELNS 237
Query: 202 XCNIPIFPVGPLHKFAPSSPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKE 261
+ + VGP F ++P + ++ C+ WL+ +SV+Y+S GS+V+ EL
Sbjct: 238 KFKL-LLNVGP---FNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTA 293
Query: 262 MAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVG 321
+A L PF+W R E LP+GF E G +V WAPQ ++L H +VG
Sbjct: 294 LAESLEECGFPFIWSFRGDPK------EKLPKGFLERTKTKGKIVAWAPQVEILKHSSVG 347
Query: 322 GFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEND-LEKGEVEKA 380
F +H GWNS LE I GVPMI RP FGDQ ++ V IG+ ++N L K ++KA
Sbjct: 348 VFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKA 407
Query: 381 VKQLMVEKEGQEMRQRAKNLKE 402
++ M ++G MRQ+ LKE
Sbjct: 408 LELTMSSEKGGIMRQKIVKLKE 429
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 127/240 (52%), Gaps = 25/240 (10%)
Query: 178 RTSKAVIWNTMNCIEXXXXXXXXXXCNI--PIFPVGPLHKF-APSSPGSLLKEDTSCISW 234
R +K +I NT + +E PI+ VGPL +P + + W
Sbjct: 210 RDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKW 269
Query: 235 LNNQAPNSVLYVSLGSI-VSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPE 293
L+ Q SV+++ GS+ VS +++E+A GL +S FLW S S+ ++ PE
Sbjct: 270 LDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW-------SNSAEKKVFPE 322
Query: 294 GFEE--AVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQ 351
GF E + G + WAPQ +VL+H A+GGF SHCGWNS LES+ GVP++ P + +Q
Sbjct: 323 GFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQ 382
Query: 352 RVSARYVSHVWRIGLQLENDLEKG-------EVEKAVKQLM-----VEKEGQEMRQRAKN 399
+++A + W +GL L D KG E+EK +K LM V K+ QEM++ ++N
Sbjct: 383 QLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRN 442
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 127/240 (52%), Gaps = 25/240 (10%)
Query: 178 RTSKAVIWNTMNCIEXXXXXXXXXXCNI--PIFPVGPLHKF-APSSPGSLLKEDTSCISW 234
R +K +I NT + +E PI+ VGPL +P + + W
Sbjct: 210 RDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKW 269
Query: 235 LNNQAPNSVLYVSLGSI-VSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPE 293
L+ Q SV+++ GS+ VS +++E+A GL +S FLW S S+ ++ PE
Sbjct: 270 LDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW-------SNSAEKKVFPE 322
Query: 294 GFEE--AVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQ 351
GF E + G + WAPQ +VL+H A+GGF SHCGWNS LES+ GVP++ P + +Q
Sbjct: 323 GFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQ 382
Query: 352 RVSARYVSHVWRIGLQLENDLEKG-------EVEKAVKQLM-----VEKEGQEMRQRAKN 399
+++A + W +GL L D KG E+EK +K LM V K+ QEM++ ++N
Sbjct: 383 QLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRN 442
>pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
pdb|2O6L|B Chain B, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
Length = 170
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 234 WLNNQAPNSVLYVSLGSIVSMDKKELKE-MAWGLYNSKQPFLWVLRPSSTSASSGIELLP 292
++ + N V+ SLGS VS +E +A L Q LW +
Sbjct: 14 FVQSSGENGVVVFSLGSXVSNXTEERANVIASALAQIPQKVLWRFDGNKP---------- 63
Query: 293 EGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQ 351
+ +G N + KW PQ D+L H F +H G N E+I G+P + P F DQ
Sbjct: 64 ----DTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQ 118
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 302 NGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYV 358
N V +W PQ D+L+ + F +H G ST+E++ VPM+ P +Q ++A +
Sbjct: 306 NVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERI 360
>pdb|3OTG|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp Bound Form
pdb|3OTH|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
pdb|3OTH|B Chain B, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
Length = 412
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 13/165 (7%)
Query: 225 LKEDTSCISWLNNQ-APNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTS 283
E +WL+++ ++Y++LG+ + L+ GL L
Sbjct: 225 FAEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVL--------- 275
Query: 284 ASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMI 343
+SG L G E V N + W PQ +L H+ + H G +TL ++ GVP +
Sbjct: 276 VASGPSLDVSGLGE-VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQL 332
Query: 344 CRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEK 388
P GD +A+ V+ L +++ V A K+L+ E+
Sbjct: 333 SFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEE 377
>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
Length = 402
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 307 KWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGL 366
+W P VL+H +H + LE+ GVP++ P F + +A V +GL
Sbjct: 287 QWIPFHSVLAH--ARACLTHGTTGAVLEAFAAGVPLVLVPHFATE--AAPSAERVIELGL 342
Query: 367 Q---LENDLEKGEVEKAVKQLMVE 387
+ LE + +AV++L +
Sbjct: 343 GSVLRPDQLEPASIREAVERLAAD 366
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,401,388
Number of Sequences: 62578
Number of extensions: 518260
Number of successful extensions: 1058
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1036
Number of HSP's gapped (non-prelim): 14
length of query: 428
length of database: 14,973,337
effective HSP length: 102
effective length of query: 326
effective length of database: 8,590,381
effective search space: 2800464206
effective search space used: 2800464206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)