Query 014232
Match_columns 428
No_of_seqs 189 out of 1728
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 03:07:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014232.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014232hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02410 UDP-glucoronosyl/UDP- 100.0 2.7E-73 5.8E-78 540.8 45.8 425 1-428 24-451 (451)
2 PLN02555 limonoid glucosyltran 100.0 7.6E-70 1.6E-74 518.7 42.9 418 1-427 24-469 (480)
3 PLN02173 UDP-glucosyl transfer 100.0 1.3E-68 2.8E-73 506.2 41.5 403 1-426 22-447 (449)
4 PLN02562 UDP-glycosyltransfera 100.0 2.3E-68 5E-73 508.6 41.7 409 1-426 23-448 (448)
5 PLN02992 coniferyl-alcohol glu 100.0 3.4E-68 7.3E-73 506.0 41.5 413 1-428 22-470 (481)
6 PLN02207 UDP-glycosyltransfera 100.0 4.1E-67 8.9E-72 497.7 43.5 419 1-427 20-465 (468)
7 PLN02152 indole-3-acetate beta 100.0 3.9E-67 8.4E-72 496.9 41.6 407 1-425 20-454 (455)
8 PLN02670 transferase, transfer 100.0 2.9E-67 6.3E-72 499.2 40.5 412 1-427 23-465 (472)
9 PLN02210 UDP-glucosyl transfer 100.0 4.4E-67 9.5E-72 500.3 41.5 406 1-426 25-454 (456)
10 PLN03015 UDP-glucosyl transfer 100.0 9.5E-67 2.1E-71 493.1 41.1 413 1-425 20-466 (470)
11 PLN02863 UDP-glucoronosyl/UDP- 100.0 1E-66 2.2E-71 499.1 41.4 417 1-427 26-471 (477)
12 PLN02448 UDP-glycosyltransfera 100.0 9.1E-67 2E-71 501.6 41.1 410 1-427 27-457 (459)
13 PLN00164 glucosyltransferase; 100.0 5.1E-66 1.1E-70 496.0 43.1 415 1-427 20-473 (480)
14 PLN02534 UDP-glycosyltransfera 100.0 2E-66 4.3E-71 495.8 39.9 417 1-427 25-486 (491)
15 PLN03004 UDP-glycosyltransfera 100.0 1.8E-66 4E-71 491.8 38.7 406 1-416 20-450 (451)
16 PLN02764 glycosyltransferase f 100.0 7.5E-66 1.6E-70 485.6 40.0 397 1-428 22-446 (453)
17 PLN02554 UDP-glycosyltransfera 100.0 9.6E-66 2.1E-70 496.2 41.3 415 1-427 19-478 (481)
18 PLN02208 glycosyltransferase f 100.0 1.4E-65 3.1E-70 486.6 39.8 398 1-427 21-439 (442)
19 PLN03007 UDP-glucosyltransfera 100.0 3.2E-65 6.9E-70 493.3 42.0 417 1-428 22-481 (482)
20 PLN00414 glycosyltransferase f 100.0 8.1E-65 1.8E-69 482.0 39.4 398 1-427 21-440 (446)
21 PLN02167 UDP-glycosyltransfera 100.0 4.8E-64 1E-68 483.7 41.9 422 1-427 20-472 (475)
22 PHA03392 egt ecdysteroid UDP-g 100.0 3.1E-54 6.8E-59 417.2 23.4 373 1-406 38-448 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 7.1E-56 1.5E-60 436.8 -9.4 371 1-406 16-425 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 1E-44 2.2E-49 357.7 13.2 377 1-406 22-438 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 5.2E-42 1.1E-46 327.8 26.6 365 1-425 12-390 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 4.4E-39 9.5E-44 309.1 25.1 346 1-405 17-386 (401)
27 COG1819 Glycosyl transferases, 100.0 1.2E-37 2.5E-42 294.0 16.3 373 1-425 18-399 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.9 5.3E-20 1.2E-24 171.2 23.3 287 2-384 19-317 (318)
29 PRK12446 undecaprenyldiphospho 99.9 2.1E-19 4.5E-24 167.9 27.2 304 2-399 19-335 (352)
30 TIGR00661 MJ1255 conserved hyp 99.8 2.9E-18 6.3E-23 159.1 22.1 121 241-387 188-314 (321)
31 PRK00726 murG undecaprenyldiph 99.7 1.5E-15 3.2E-20 143.7 24.7 115 302-426 236-356 (357)
32 COG0707 MurG UDP-N-acetylgluco 99.7 3E-15 6.4E-20 138.3 24.9 147 240-400 182-338 (357)
33 cd03785 GT1_MurG MurG is an N- 99.7 2.6E-14 5.5E-19 135.0 24.9 138 240-387 180-324 (350)
34 TIGR01133 murG undecaprenyldip 99.5 6.7E-12 1.5E-16 118.4 26.9 75 310-387 243-321 (348)
35 PF04101 Glyco_tran_28_C: Glyc 99.5 1.6E-15 3.5E-20 126.9 -1.6 135 243-387 1-144 (167)
36 COG4671 Predicted glycosyl tra 99.4 1.2E-10 2.6E-15 103.1 23.2 133 240-386 218-364 (400)
37 TIGR03590 PseG pseudaminic aci 99.4 2.7E-11 5.9E-16 109.7 18.1 103 242-357 171-278 (279)
38 TIGR00215 lpxB lipid-A-disacch 99.4 3.1E-11 6.8E-16 114.6 18.7 171 239-423 189-384 (385)
39 TIGR03492 conserved hypothetic 99.4 5.3E-10 1.2E-14 106.3 27.0 343 2-423 14-394 (396)
40 PLN02605 monogalactosyldiacylg 99.3 1.2E-09 2.6E-14 104.1 23.5 112 301-426 265-380 (382)
41 cd03814 GT1_like_2 This family 99.3 1.9E-08 4.1E-13 95.0 31.1 157 242-425 197-363 (364)
42 PRK13608 diacylglycerol glucos 99.3 7.9E-10 1.7E-14 105.6 20.8 163 240-426 201-370 (391)
43 PRK00025 lpxB lipid-A-disaccha 99.1 9.8E-09 2.1E-13 98.1 22.1 106 312-426 256-376 (380)
44 PRK13609 diacylglycerol glucos 99.1 2.1E-08 4.6E-13 95.7 23.4 132 240-387 201-338 (380)
45 PLN02871 UDP-sulfoquinovose:DA 99.1 2.3E-07 5E-12 91.0 29.3 140 242-400 263-414 (465)
46 cd03818 GT1_ExpC_like This fam 99.1 4.7E-07 1E-11 87.0 30.7 91 301-399 281-379 (396)
47 TIGR03449 mycothiol_MshA UDP-N 99.0 5.3E-07 1.1E-11 86.9 29.3 92 301-400 283-382 (405)
48 cd03823 GT1_ExpE7_like This fa 99.0 8.6E-07 1.9E-11 83.4 30.1 130 241-388 190-330 (359)
49 cd03794 GT1_wbuB_like This fam 99.0 1.8E-07 4E-12 88.9 25.0 142 241-400 219-379 (394)
50 cd03800 GT1_Sucrose_synthase T 99.0 1.9E-06 4.1E-11 82.7 31.2 90 301-398 283-380 (398)
51 cd03817 GT1_UGDG_like This fam 99.0 1.7E-06 3.6E-11 81.8 30.0 95 300-403 258-360 (374)
52 PRK10307 putative glycosyl tra 99.0 2E-06 4.3E-11 83.1 30.8 162 241-427 228-407 (412)
53 cd03816 GT1_ALG1_like This fam 98.9 1.4E-06 3.1E-11 84.0 26.7 91 301-401 294-399 (415)
54 PRK05749 3-deoxy-D-manno-octul 98.9 7.2E-07 1.6E-11 86.5 23.5 102 313-426 315-422 (425)
55 cd04962 GT1_like_5 This family 98.9 1.5E-06 3.2E-11 82.7 25.0 112 301-427 253-370 (371)
56 cd03801 GT1_YqgM_like This fam 98.9 6.2E-06 1.3E-10 77.5 29.1 81 300-388 255-342 (374)
57 TIGR02468 sucrsPsyn_pln sucros 98.8 4.9E-06 1.1E-10 86.2 28.6 94 301-400 548-651 (1050)
58 cd03820 GT1_amsD_like This fam 98.8 3.6E-06 7.9E-11 78.5 25.5 93 301-401 235-334 (348)
59 TIGR02472 sucr_P_syn_N sucrose 98.8 1.2E-05 2.6E-10 78.2 29.1 111 300-425 316-438 (439)
60 cd03798 GT1_wlbH_like This fam 98.8 1.4E-05 3E-10 75.4 28.9 113 300-428 258-377 (377)
61 cd03808 GT1_cap1E_like This fa 98.8 2E-05 4.3E-10 73.9 29.8 145 241-399 187-342 (359)
62 cd03795 GT1_like_4 This family 98.8 7.2E-06 1.6E-10 77.3 26.5 143 242-401 191-347 (357)
63 cd03819 GT1_WavL_like This fam 98.8 1.5E-05 3.3E-10 75.1 27.6 151 241-403 184-348 (355)
64 cd03796 GT1_PIG-A_like This fa 98.7 1.5E-05 3.3E-10 76.5 27.3 77 301-387 250-333 (398)
65 cd03805 GT1_ALG2_like This fam 98.7 1E-05 2.2E-10 77.6 25.6 91 300-399 279-377 (392)
66 cd03825 GT1_wcfI_like This fam 98.7 6.9E-05 1.5E-09 70.9 29.0 114 300-428 243-365 (365)
67 cd03822 GT1_ecORF704_like This 98.7 2.1E-05 4.6E-10 74.2 25.3 108 300-424 246-364 (366)
68 cd05844 GT1_like_7 Glycosyltra 98.6 2.8E-05 6.1E-10 73.7 25.6 91 300-398 244-348 (367)
69 cd03786 GT1_UDP-GlcNAc_2-Epime 98.6 2E-06 4.3E-11 81.6 16.1 130 240-387 197-337 (363)
70 cd04955 GT1_like_6 This family 98.6 7.2E-05 1.6E-09 70.7 26.6 155 244-425 195-362 (363)
71 PF03033 Glyco_transf_28: Glyc 98.5 3.1E-09 6.7E-14 85.9 -3.8 110 1-115 15-132 (139)
72 cd03821 GT1_Bme6_like This fam 98.5 0.00019 4E-09 67.7 27.9 91 300-400 261-359 (375)
73 cd03799 GT1_amsK_like This is 98.5 4.5E-05 9.7E-10 71.8 23.4 91 300-398 235-339 (355)
74 PLN02275 transferase, transfer 98.4 0.00024 5.3E-09 67.5 25.6 75 301-385 286-371 (371)
75 cd03806 GT1_ALG11_like This fa 98.4 0.0003 6.5E-09 68.0 26.2 80 300-388 304-393 (419)
76 PRK14089 ipid-A-disaccharide s 98.4 1.9E-05 4.2E-10 73.2 16.8 157 242-422 168-345 (347)
77 KOG3349 Predicted glycosyltran 98.4 2.6E-06 5.6E-11 66.2 9.0 116 242-367 4-131 (170)
78 cd03811 GT1_WabH_like This fam 98.3 0.00027 5.9E-09 65.8 23.6 80 300-387 245-332 (353)
79 PLN00142 sucrose synthase 98.3 0.0012 2.7E-08 67.4 27.7 69 323-397 670-747 (815)
80 cd03807 GT1_WbnK_like This fam 98.2 0.0023 5E-08 60.0 27.8 108 301-424 251-363 (365)
81 cd03809 GT1_mtfB_like This fam 98.2 0.00026 5.7E-09 66.7 21.1 80 299-388 251-337 (365)
82 cd03802 GT1_AviGT4_like This f 98.2 0.00041 8.8E-09 64.8 22.0 128 244-387 173-308 (335)
83 PLN02949 transferase, transfer 98.1 0.00067 1.5E-08 66.1 21.9 111 300-426 334-455 (463)
84 PF04007 DUF354: Protein of un 98.1 0.0011 2.4E-08 61.1 21.7 126 240-385 178-308 (335)
85 PF02684 LpxB: Lipid-A-disacch 98.1 0.00052 1.1E-08 64.2 18.4 201 189-417 141-367 (373)
86 PF02350 Epimerase_2: UDP-N-ac 98.1 6.3E-05 1.4E-09 70.3 12.4 139 239-399 178-327 (346)
87 PRK15484 lipopolysaccharide 1, 98.0 0.00036 7.8E-09 66.6 17.0 115 299-427 255-377 (380)
88 cd03804 GT1_wbaZ_like This fam 98.0 0.00024 5.1E-09 67.0 15.5 135 244-398 197-339 (351)
89 TIGR02470 sucr_synth sucrose s 98.0 0.028 6.1E-07 57.7 31.4 79 301-385 619-707 (784)
90 cd03812 GT1_CapH_like This fam 98.0 0.0038 8.2E-08 58.8 23.4 80 300-388 248-332 (358)
91 PF13844 Glyco_transf_41: Glyc 98.0 0.00013 2.8E-09 69.7 13.0 136 239-387 282-430 (468)
92 TIGR00236 wecB UDP-N-acetylglu 98.0 8.2E-05 1.8E-09 70.6 11.6 157 242-424 198-364 (365)
93 PRK15427 colanic acid biosynth 97.9 0.00031 6.7E-09 67.6 15.4 114 300-428 278-406 (406)
94 cd04946 GT1_AmsK_like This fam 97.9 0.00064 1.4E-08 65.5 16.3 160 241-422 229-406 (407)
95 PRK15179 Vi polysaccharide bio 97.9 0.022 4.8E-07 58.1 27.6 93 300-399 573-672 (694)
96 COG1519 KdtA 3-deoxy-D-manno-o 97.7 0.013 2.9E-07 54.6 21.3 99 302-405 301-405 (419)
97 cd04950 GT1_like_1 Glycosyltra 97.7 0.043 9.3E-07 52.2 25.8 124 243-387 206-340 (373)
98 COG5017 Uncharacterized conser 97.7 0.00054 1.2E-08 52.6 9.7 107 244-369 2-122 (161)
99 PLN02846 digalactosyldiacylgly 97.7 0.015 3.2E-07 56.3 21.9 72 305-387 288-363 (462)
100 COG0763 LpxB Lipid A disacchar 97.7 0.002 4.4E-08 59.2 14.7 212 189-426 144-380 (381)
101 PF00534 Glycos_transf_1: Glyc 97.6 0.00071 1.5E-08 56.5 11.1 91 300-398 72-170 (172)
102 PRK01021 lpxB lipid-A-disaccha 97.6 0.0093 2E-07 58.8 19.5 194 189-404 369-589 (608)
103 TIGR03568 NeuC_NnaA UDP-N-acet 97.6 0.0023 5.1E-08 60.5 14.7 129 241-386 201-338 (365)
104 COG3980 spsG Spore coat polysa 97.5 0.0015 3.2E-08 57.1 10.8 140 243-399 160-302 (318)
105 PRK10125 putative glycosyl tra 97.5 0.11 2.4E-06 49.9 25.9 114 244-381 243-365 (405)
106 TIGR02149 glgA_Coryne glycogen 97.5 0.0038 8.1E-08 59.7 14.9 164 242-427 201-386 (388)
107 cd04951 GT1_WbdM_like This fam 97.4 0.0053 1.1E-07 57.8 14.7 108 301-424 245-357 (360)
108 TIGR03087 stp1 sugar transfera 97.4 0.0096 2.1E-07 57.2 16.5 108 301-425 280-394 (397)
109 PF13692 Glyco_trans_1_4: Glyc 97.4 0.00064 1.4E-08 54.2 7.1 127 243-387 3-135 (135)
110 PRK09922 UDP-D-galactose:(gluc 97.3 0.0045 9.8E-08 58.6 13.5 149 242-403 180-343 (359)
111 TIGR02918 accessory Sec system 97.3 0.0057 1.2E-07 60.3 14.3 113 301-427 376-499 (500)
112 KOG4626 O-linked N-acetylgluco 97.3 0.0042 9E-08 60.1 11.8 137 239-387 756-904 (966)
113 TIGR03088 stp2 sugar transfera 97.2 0.014 3E-07 55.5 15.6 111 301-426 255-371 (374)
114 PRK09814 beta-1,6-galactofuran 97.2 0.0019 4.1E-08 60.4 9.2 110 300-423 206-331 (333)
115 cd04949 GT1_gtfA_like This fam 97.0 0.0061 1.3E-07 57.9 10.9 99 301-404 261-363 (372)
116 cd03813 GT1_like_3 This family 96.8 0.07 1.5E-06 52.6 16.7 92 300-398 353-454 (475)
117 cd03792 GT1_Trehalose_phosphor 96.8 0.062 1.3E-06 51.1 15.8 111 301-428 252-372 (372)
118 COG3914 Spy Predicted O-linked 96.8 0.02 4.4E-07 55.2 11.8 133 239-382 427-573 (620)
119 PLN02501 digalactosyldiacylgly 96.5 0.47 1E-05 47.9 19.5 76 302-388 602-682 (794)
120 PF06722 DUF1205: Protein of u 96.4 0.0061 1.3E-07 45.1 4.7 62 231-295 30-96 (97)
121 PHA01633 putative glycosyl tra 96.3 0.027 5.8E-07 52.2 9.4 102 300-404 200-324 (335)
122 PRK15490 Vi polysaccharide bio 96.2 0.26 5.6E-06 48.6 15.5 112 300-426 454-574 (578)
123 TIGR02095 glgA glycogen/starch 96.1 0.12 2.6E-06 51.0 13.2 114 299-428 344-473 (473)
124 PRK14098 glycogen synthase; Pr 95.7 0.23 5E-06 49.0 13.3 114 298-426 359-484 (489)
125 PF13579 Glyco_trans_4_4: Glyc 95.7 0.019 4.1E-07 46.8 4.8 94 2-112 8-104 (160)
126 cd03791 GT1_Glycogen_synthase_ 95.1 0.27 5.9E-06 48.4 11.9 84 300-387 350-442 (476)
127 PF12000 Glyco_trans_4_3: Gkyc 95.0 0.39 8.4E-06 39.7 10.2 96 10-113 1-97 (171)
128 PRK00654 glgA glycogen synthas 94.9 0.41 8.9E-06 47.1 12.5 131 242-386 282-427 (466)
129 PHA01630 putative group 1 glyc 94.9 1.3 2.8E-05 41.3 15.0 113 307-427 196-330 (331)
130 PF13477 Glyco_trans_4_2: Glyc 94.7 0.47 1E-05 37.7 10.3 90 2-112 14-107 (139)
131 PF13524 Glyco_trans_1_2: Glyc 94.6 0.39 8.3E-06 35.1 8.8 82 326-422 9-91 (92)
132 PRK10017 colanic acid biosynth 93.4 1.8 3.9E-05 41.8 12.9 163 232-403 225-410 (426)
133 COG0381 WecB UDP-N-acetylgluco 93.0 1 2.2E-05 42.0 10.0 138 241-400 204-351 (383)
134 TIGR02400 trehalose_OtsA alpha 92.0 1.7 3.6E-05 42.6 10.8 103 307-426 342-455 (456)
135 PF13439 Glyco_transf_4: Glyco 92.0 1.9 4.2E-05 35.3 10.0 23 2-24 19-41 (177)
136 cd03788 GT1_TPS Trehalose-6-Ph 91.7 3.1 6.7E-05 40.8 12.4 103 306-425 346-459 (460)
137 PLN02939 transferase, transfer 91.4 5.6 0.00012 42.1 14.1 83 301-386 837-930 (977)
138 PLN02316 synthase/transferase 91.2 3 6.6E-05 44.6 12.2 117 301-425 900-1031(1036)
139 cd01635 Glycosyltransferase_GT 90.8 1.3 2.7E-05 38.1 8.0 49 301-351 161-217 (229)
140 PF01975 SurE: Survival protei 89.6 1.1 2.4E-05 38.1 6.2 25 2-26 17-41 (196)
141 TIGR03713 acc_sec_asp1 accesso 87.6 2.1 4.4E-05 42.6 7.5 92 301-405 409-507 (519)
142 COG4370 Uncharacterized protei 87.5 1.5 3.3E-05 39.2 5.8 91 301-399 294-388 (412)
143 PF06258 Mito_fiss_Elm1: Mitoc 87.3 4.5 9.6E-05 37.3 9.1 59 309-370 220-282 (311)
144 PRK00654 glgA glycogen synthas 84.2 4.6 9.9E-05 39.7 8.2 20 2-21 24-43 (466)
145 TIGR02919 accessory Sec system 84.0 16 0.00035 35.5 11.6 133 240-401 282-423 (438)
146 cd03793 GT1_Glycogen_synthase_ 83.8 3.8 8.3E-05 40.8 7.2 75 310-387 467-552 (590)
147 PRK14099 glycogen synthase; Pr 83.7 28 0.0006 34.5 13.4 84 301-387 350-447 (485)
148 cd03791 GT1_Glycogen_synthase_ 81.7 9.2 0.0002 37.6 9.3 19 3-21 24-42 (476)
149 COG0438 RfaG Glycosyltransfera 80.6 44 0.00095 30.2 16.1 79 301-387 257-342 (381)
150 cd01635 Glycosyltransferase_GT 80.0 7.4 0.00016 33.2 7.2 32 83-114 51-85 (229)
151 TIGR02095 glgA glycogen/starch 79.2 10 0.00022 37.3 8.7 19 3-21 25-43 (473)
152 PLN03063 alpha,alpha-trehalose 78.4 11 0.00023 39.9 8.7 101 313-426 371-476 (797)
153 PF02142 MGS: MGS-like domain 77.1 1 2.2E-05 33.3 0.6 84 1-108 2-94 (95)
154 smart00851 MGS MGS-like domain 76.8 6.2 0.00013 28.6 4.8 79 1-108 2-89 (90)
155 PRK14501 putative bifunctional 76.0 35 0.00075 35.8 11.7 109 305-426 346-461 (726)
156 TIGR00715 precor6x_red precorr 75.6 9.1 0.0002 34.1 6.4 22 3-24 14-35 (256)
157 COG0496 SurE Predicted acid ph 75.5 18 0.00039 31.9 7.9 25 2-27 17-41 (252)
158 TIGR00087 surE 5'/3'-nucleotid 75.4 35 0.00077 30.2 9.9 24 2-26 17-40 (244)
159 PF05159 Capsule_synth: Capsul 74.3 20 0.00043 32.2 8.4 41 303-346 185-225 (269)
160 COG1817 Uncharacterized protei 73.1 76 0.0016 29.1 16.4 96 3-115 18-115 (346)
161 cd03789 GT1_LPS_heptosyltransf 72.7 12 0.00026 33.8 6.7 94 242-345 122-223 (279)
162 PRK13933 stationary phase surv 71.5 51 0.0011 29.3 9.9 24 2-26 17-40 (253)
163 PRK13932 stationary phase surv 70.2 47 0.001 29.6 9.4 24 2-26 22-45 (257)
164 PRK09620 hypothetical protein; 70.1 21 0.00045 31.3 7.2 19 3-21 34-52 (229)
165 COG3980 spsG Spore coat polysa 69.4 9.9 0.00022 34.0 4.9 78 1-113 21-102 (318)
166 PRK13931 stationary phase surv 67.4 65 0.0014 28.8 9.8 25 2-26 17-44 (261)
167 TIGR02193 heptsyl_trn_I lipopo 67.3 21 0.00045 33.0 7.1 130 241-385 179-319 (319)
168 PRK13935 stationary phase surv 66.8 70 0.0015 28.5 9.7 24 2-26 17-40 (253)
169 PF04127 DFP: DNA / pantothena 65.4 12 0.00025 31.6 4.5 21 2-22 33-53 (185)
170 COG0801 FolK 7,8-dihydro-6-hyd 61.9 18 0.00038 29.5 4.7 29 243-271 3-31 (160)
171 KOG2941 Beta-1,4-mannosyltrans 61.7 1.4E+02 0.003 27.9 12.3 143 240-400 253-423 (444)
172 cd07025 Peptidase_S66 LD-Carbo 61.2 16 0.00034 33.2 4.9 76 254-350 46-123 (282)
173 COG1703 ArgK Putative periplas 60.4 50 0.0011 30.1 7.6 24 3-26 70-93 (323)
174 PRK08057 cobalt-precorrin-6x r 60.4 35 0.00075 30.3 6.8 31 83-113 65-101 (248)
175 PRK00346 surE 5'(3')-nucleotid 60.1 1.1E+02 0.0025 27.1 9.9 24 2-26 17-40 (250)
176 cd07038 TPP_PYR_PDC_IPDC_like 58.7 1E+02 0.0022 25.2 9.4 28 320-347 60-93 (162)
177 PF09314 DUF1972: Domain of un 58.3 21 0.00046 30.0 4.8 37 3-39 25-62 (185)
178 PF10649 DUF2478: Protein of u 58.2 75 0.0016 26.0 7.7 99 2-114 17-133 (159)
179 cd03412 CbiK_N Anaerobic cobal 56.1 22 0.00047 27.8 4.3 37 242-278 2-40 (127)
180 cd04951 GT1_WbdM_like This fam 54.9 84 0.0018 29.0 9.0 20 2-21 19-38 (360)
181 PRK02797 4-alpha-L-fucosyltran 53.7 1.8E+02 0.004 26.7 10.5 80 301-385 206-292 (322)
182 cd03792 GT1_Trehalose_phosphor 53.0 20 0.00044 33.8 4.5 20 2-21 19-38 (372)
183 PLN02470 acetolactate synthase 52.6 23 0.0005 36.0 5.0 92 247-346 2-109 (585)
184 PF06180 CbiK: Cobalt chelatas 52.4 20 0.00044 32.1 4.0 39 242-280 2-43 (262)
185 cd00532 MGS-like MGS-like doma 52.3 26 0.00056 26.6 4.1 81 1-110 14-105 (112)
186 PLN02316 synthase/transferase 52.0 1.1E+02 0.0025 33.2 10.0 21 2-22 611-631 (1036)
187 cd07062 Peptidase_S66_mccF_lik 51.3 28 0.00061 32.1 4.9 75 254-349 50-126 (308)
188 TIGR00725 conserved hypothetic 51.2 61 0.0013 26.5 6.4 98 230-347 22-123 (159)
189 PF04464 Glyphos_transf: CDP-G 50.4 30 0.00064 32.7 5.1 109 301-421 252-367 (369)
190 PRK09922 UDP-D-galactose:(gluc 50.1 43 0.00094 31.4 6.2 21 2-22 21-43 (359)
191 cd02037 MRP-like MRP (Multiple 49.8 39 0.00084 27.7 5.2 21 2-22 18-38 (169)
192 PF01075 Glyco_transf_9: Glyco 49.7 39 0.00084 29.7 5.5 102 240-351 104-212 (247)
193 TIGR02201 heptsyl_trn_III lipo 49.7 72 0.0016 29.8 7.6 97 241-345 181-285 (344)
194 COG2861 Uncharacterized protei 49.4 99 0.0022 27.1 7.4 41 65-112 138-181 (250)
195 TIGR00345 arsA arsenite-activa 49.2 72 0.0016 29.0 7.2 22 3-24 4-25 (284)
196 PRK13982 bifunctional SbtC-lik 48.8 30 0.00065 33.9 4.8 22 2-23 286-307 (475)
197 cd01840 SGNH_hydrolase_yrhL_li 48.7 36 0.00079 27.3 4.7 38 240-278 50-87 (150)
198 PRK05632 phosphate acetyltrans 48.6 1.6E+02 0.0034 30.8 10.3 86 2-114 21-116 (684)
199 TIGR02398 gluc_glyc_Psyn gluco 48.1 2.9E+02 0.0063 27.4 15.1 106 304-426 365-481 (487)
200 PF10933 DUF2827: Protein of u 48.1 1.2E+02 0.0027 28.3 8.3 103 302-425 254-363 (364)
201 PF00731 AIRC: AIR carboxylase 47.6 1.5E+02 0.0033 24.0 10.6 136 243-406 2-148 (150)
202 KOG1250 Threonine/serine dehyd 47.1 27 0.00058 32.9 3.9 113 244-388 197-317 (457)
203 PRK06718 precorrin-2 dehydroge 47.0 1.8E+02 0.004 24.8 10.3 141 240-406 10-164 (202)
204 COG0052 RpsB Ribosomal protein 46.7 51 0.0011 29.0 5.3 31 83-113 156-188 (252)
205 PRK06270 homoserine dehydrogen 46.4 1.8E+02 0.0038 27.3 9.5 59 310-369 80-150 (341)
206 PF08323 Glyco_transf_5: Starc 46.2 17 0.00037 32.2 2.6 19 3-21 24-42 (245)
207 PRK04940 hypothetical protein; 46.2 58 0.0012 27.3 5.5 31 83-113 60-91 (180)
208 PRK10964 ADP-heptose:LPS hepto 46.1 86 0.0019 28.9 7.4 133 242-386 179-321 (322)
209 COG4394 Uncharacterized protei 46.1 1.9E+02 0.0041 26.3 8.7 113 304-427 241-367 (370)
210 cd07035 TPP_PYR_POX_like Pyrim 45.5 1.6E+02 0.0034 23.6 9.1 27 321-347 61-93 (155)
211 PF06925 MGDG_synth: Monogalac 45.5 67 0.0014 26.4 5.9 40 69-112 79-124 (169)
212 PF02951 GSH-S_N: Prokaryotic 45.3 22 0.00049 27.4 2.7 20 2-21 21-40 (119)
213 PRK04885 ppnK inorganic polyph 44.2 38 0.00083 30.4 4.5 53 317-387 35-93 (265)
214 PF13450 NAD_binding_8: NAD(P) 44.1 29 0.00062 23.6 2.9 20 2-21 9-28 (68)
215 PF05728 UPF0227: Uncharacteri 43.8 51 0.0011 27.8 4.9 30 85-114 61-91 (187)
216 COG4088 Predicted nucleotide k 43.5 2.1E+02 0.0046 24.7 8.3 35 83-117 73-113 (261)
217 TIGR02195 heptsyl_trn_II lipop 43.1 1E+02 0.0022 28.6 7.4 96 240-345 173-276 (334)
218 cd01423 MGS_CPS_I_III Methylgl 42.6 30 0.00066 26.4 3.2 82 1-108 15-105 (116)
219 PRK10422 lipopolysaccharide co 42.3 1.2E+02 0.0027 28.3 7.9 97 241-345 183-287 (352)
220 COG2910 Putative NADH-flavin r 42.3 25 0.00054 29.4 2.7 19 3-21 15-33 (211)
221 COG1255 Uncharacterized protei 42.0 45 0.00098 25.4 3.8 21 1-21 25-45 (129)
222 PRK02649 ppnK inorganic polyph 41.8 42 0.00091 30.8 4.4 55 314-387 65-124 (305)
223 cd07039 TPP_PYR_POX Pyrimidine 41.8 87 0.0019 25.7 6.0 27 320-346 64-96 (164)
224 COG1484 DnaC DNA replication p 41.4 82 0.0018 28.1 6.1 20 2-21 123-142 (254)
225 cd01421 IMPCH Inosine monophos 41.3 29 0.00063 29.1 3.0 83 1-92 13-100 (187)
226 KOG0853 Glycosyltransferase [C 41.0 50 0.0011 32.4 4.9 57 331-397 381-440 (495)
227 TIGR03087 stp1 sugar transfera 40.7 19 0.00042 34.4 2.3 42 64-109 89-130 (397)
228 PRK03359 putative electron tra 40.7 48 0.001 29.6 4.5 31 83-113 112-148 (256)
229 PF06506 PrpR_N: Propionate ca 40.7 25 0.00055 29.2 2.7 32 316-350 33-64 (176)
230 PRK10916 ADP-heptose:LPS hepto 40.5 1E+02 0.0023 28.8 7.1 96 240-345 179-286 (348)
231 COG2099 CobK Precorrin-6x redu 40.5 1.3E+02 0.0027 26.8 6.8 82 2-113 15-102 (257)
232 PF07015 VirC1: VirC1 protein; 40.1 24 0.00052 30.8 2.5 25 2-26 20-44 (231)
233 PRK12342 hypothetical protein; 39.9 61 0.0013 28.9 5.0 31 83-113 109-145 (254)
234 TIGR02015 BchY chlorophyllide 39.9 1.1E+02 0.0024 29.7 7.2 26 83-111 355-380 (422)
235 PRK01231 ppnK inorganic polyph 39.2 1.9E+02 0.0041 26.5 8.2 54 316-387 61-118 (295)
236 PF02433 FixO: Cytochrome C ox 38.8 53 0.0011 28.4 4.2 90 336-428 128-221 (226)
237 PRK13934 stationary phase surv 38.7 84 0.0018 28.2 5.7 24 2-26 17-40 (266)
238 PRK06732 phosphopantothenate-- 38.5 65 0.0014 28.2 5.0 20 2-21 30-49 (229)
239 PF06506 PrpR_N: Propionate ca 38.2 44 0.00096 27.8 3.8 41 66-114 113-153 (176)
240 TIGR01012 Sa_S2_E_A ribosomal 38.1 44 0.00096 28.4 3.7 31 83-113 108-140 (196)
241 PF10087 DUF2325: Uncharacteri 37.9 97 0.0021 22.7 5.2 35 83-117 48-88 (97)
242 COG0859 RfaF ADP-heptose:LPS h 37.8 1.2E+02 0.0025 28.3 6.9 95 241-345 175-276 (334)
243 PRK14077 pnk inorganic polypho 37.8 55 0.0012 29.8 4.5 58 312-387 59-120 (287)
244 COG1618 Predicted nucleotide k 37.3 48 0.001 27.2 3.6 38 2-40 23-60 (179)
245 PF00070 Pyr_redox: Pyridine n 37.1 53 0.0011 22.9 3.5 21 2-22 12-32 (80)
246 cd01141 TroA_d Periplasmic bin 36.9 52 0.0011 27.4 4.1 30 83-112 69-100 (186)
247 PRK10916 ADP-heptose:LPS hepto 36.9 2.3E+02 0.0049 26.5 8.8 29 83-113 261-289 (348)
248 PRK12446 undecaprenyldiphospho 36.9 1.2E+02 0.0026 28.6 6.8 95 242-344 3-119 (352)
249 PRK02155 ppnK NAD(+)/NADH kina 36.3 66 0.0014 29.4 4.8 57 313-387 59-119 (291)
250 PRK04020 rps2P 30S ribosomal p 35.7 51 0.0011 28.2 3.7 31 83-113 114-146 (204)
251 PRK09219 xanthine phosphoribos 35.7 86 0.0019 26.5 5.1 31 83-113 50-82 (189)
252 TIGR03088 stp2 sugar transfera 35.6 1.2E+02 0.0025 28.6 6.7 84 2-108 21-107 (374)
253 PLN02929 NADH kinase 35.5 54 0.0012 30.0 4.0 66 316-387 63-137 (301)
254 COG1066 Sms Predicted ATP-depe 35.1 11 0.00023 35.8 -0.4 23 1-24 110-132 (456)
255 PLN02935 Bifunctional NADH kin 35.1 65 0.0014 31.7 4.7 53 316-387 261-318 (508)
256 PRK14092 2-amino-4-hydroxy-6-h 35.1 99 0.0021 25.4 5.2 30 240-269 6-35 (163)
257 COG1448 TyrB Aspartate/tyrosin 35.0 3.8E+02 0.0081 25.5 9.3 22 391-412 312-333 (396)
258 PF05225 HTH_psq: helix-turn-h 34.5 51 0.0011 20.3 2.6 26 373-400 1-26 (45)
259 PF07429 Glyco_transf_56: 4-al 34.5 1E+02 0.0022 28.8 5.6 81 301-386 245-332 (360)
260 PF02016 Peptidase_S66: LD-car 34.1 33 0.00072 31.2 2.5 76 254-350 46-123 (284)
261 cd03416 CbiX_SirB_N Sirohydroc 34.1 1.4E+02 0.0029 21.9 5.5 35 242-276 1-37 (101)
262 PF09001 DUF1890: Domain of un 33.8 30 0.00065 27.2 1.8 20 2-21 17-36 (139)
263 TIGR00236 wecB UDP-N-acetylglu 33.8 64 0.0014 30.4 4.6 29 83-111 86-117 (365)
264 PF03853 YjeF_N: YjeF-related 33.8 46 0.001 27.5 3.1 19 2-20 42-60 (169)
265 PF07894 DUF1669: Protein of u 33.8 86 0.0019 28.3 4.9 49 63-114 131-184 (284)
266 cd00550 ArsA_ATPase Oxyanion-t 33.6 1.3E+02 0.0028 26.8 6.2 23 2-24 18-40 (254)
267 COG0503 Apt Adenine/guanine ph 33.3 1.2E+02 0.0025 25.5 5.5 29 83-111 53-83 (179)
268 TIGR02195 heptsyl_trn_II lipop 33.3 3.2E+02 0.007 25.2 9.2 29 83-113 251-279 (334)
269 TIGR01498 folK 2-amino-4-hydro 33.2 48 0.001 25.9 3.0 27 244-270 1-27 (127)
270 TIGR02898 spore_YhcN_YlaJ spor 33.2 2.4E+02 0.0051 23.1 7.0 33 391-427 123-155 (158)
271 PF01372 Melittin: Melittin; 32.7 6.5 0.00014 20.4 -1.3 17 328-344 1-17 (26)
272 PF01210 NAD_Gly3P_dh_N: NAD-d 32.5 40 0.00086 27.4 2.5 21 2-22 12-32 (157)
273 TIGR02853 spore_dpaA dipicolin 32.4 84 0.0018 28.6 4.9 20 2-21 14-33 (287)
274 PRK01911 ppnK inorganic polyph 32.0 77 0.0017 28.9 4.5 58 312-387 59-120 (292)
275 PRK05265 pyridoxine 5'-phospha 31.9 3.5E+02 0.0075 23.8 8.1 46 65-115 113-158 (239)
276 PRK06276 acetolactate synthase 31.8 1.9E+02 0.004 29.5 7.7 27 320-346 64-96 (586)
277 cd07037 TPP_PYR_MenD Pyrimidin 31.8 33 0.00072 28.1 1.9 27 320-346 61-93 (162)
278 PHA02754 hypothetical protein; 31.5 89 0.0019 20.3 3.3 23 381-406 7-29 (67)
279 cd08770 DAP_dppA_3 Peptidase M 31.5 2E+02 0.0043 25.8 6.8 23 258-280 38-60 (263)
280 COG1422 Predicted membrane pro 31.2 1.1E+02 0.0023 26.0 4.7 71 330-410 23-94 (201)
281 PRK01077 cobyrinic acid a,c-di 31.1 1.2E+02 0.0026 29.7 6.0 32 83-114 81-124 (451)
282 COG0299 PurN Folate-dependent 30.6 1.3E+02 0.0029 25.4 5.2 31 83-113 29-59 (200)
283 TIGR00379 cobB cobyrinic acid 30.5 2.4E+02 0.0052 27.6 7.9 33 83-115 77-121 (449)
284 COG4081 Uncharacterized protei 30.4 44 0.00095 25.9 2.2 20 2-21 22-41 (148)
285 PF07355 GRDB: Glycine/sarcosi 30.3 78 0.0017 29.5 4.2 30 83-112 80-119 (349)
286 PTZ00254 40S ribosomal protein 30.3 68 0.0015 28.4 3.7 31 83-113 118-150 (249)
287 TIGR01470 cysG_Nterm siroheme 30.3 3.5E+02 0.0076 23.1 9.7 143 241-406 10-164 (205)
288 PRK08155 acetolactate synthase 30.1 1.6E+02 0.0035 29.8 6.9 90 248-346 4-109 (564)
289 PRK03378 ppnK inorganic polyph 30.0 83 0.0018 28.7 4.4 57 312-387 58-119 (292)
290 PF08660 Alg14: Oligosaccharid 29.9 1.2E+02 0.0026 25.1 5.0 31 83-113 92-130 (170)
291 PRK00048 dihydrodipicolinate r 29.7 4E+02 0.0087 23.7 8.8 56 310-369 53-114 (257)
292 PRK10422 lipopolysaccharide co 29.7 4E+02 0.0086 24.9 9.2 29 83-113 262-290 (352)
293 PF10093 DUF2331: Uncharacteri 29.6 1.8E+02 0.0038 27.6 6.4 97 255-358 193-299 (374)
294 TIGR00355 purH phosphoribosyla 29.4 58 0.0013 32.0 3.4 83 1-92 13-100 (511)
295 PF05693 Glycogen_syn: Glycoge 29.4 91 0.002 31.5 4.7 94 309-404 461-566 (633)
296 COG0003 ArsA Predicted ATPase 29.3 2.5E+02 0.0055 26.0 7.4 22 3-24 21-42 (322)
297 TIGR02149 glgA_Coryne glycogen 29.1 2.3E+02 0.005 26.6 7.6 34 2-39 23-56 (388)
298 TIGR00313 cobQ cobyric acid sy 29.0 5.8E+02 0.013 25.3 10.7 31 83-113 122-163 (475)
299 PLN02891 IMP cyclohydrolase 28.9 51 0.0011 32.5 2.9 83 2-92 36-123 (547)
300 PRK00923 sirohydrochlorin coba 28.7 2.2E+02 0.0048 21.9 6.1 36 241-276 2-39 (126)
301 PRK11253 ldcA L,D-carboxypepti 28.6 1.3E+02 0.0028 27.7 5.5 28 252-280 47-76 (305)
302 PRK07525 sulfoacetaldehyde ace 28.5 4.4E+02 0.0096 26.9 9.8 28 319-346 68-101 (588)
303 PRK08305 spoVFB dipicolinate s 28.5 59 0.0013 27.6 2.9 21 2-22 23-43 (196)
304 PRK04946 hypothetical protein; 28.2 40 0.00088 28.2 1.9 57 259-333 112-169 (181)
305 TIGR02201 heptsyl_trn_III lipo 28.0 4E+02 0.0086 24.7 8.8 29 83-113 260-288 (344)
306 PRK08322 acetolactate synthase 27.9 2.1E+02 0.0046 28.8 7.3 28 319-346 63-96 (547)
307 cd06559 Endonuclease_V Endonuc 27.9 74 0.0016 27.4 3.5 31 83-113 93-130 (208)
308 COG2987 HutU Urocanate hydrata 27.7 41 0.0009 32.2 2.0 40 304-343 466-507 (561)
309 PRK12311 rpsB 30S ribosomal pr 27.6 84 0.0018 29.1 3.9 31 83-113 152-184 (326)
310 PRK03094 hypothetical protein; 27.1 64 0.0014 22.8 2.4 20 2-21 11-30 (80)
311 TIGR02193 heptsyl_trn_I lipopo 26.7 68 0.0015 29.5 3.4 29 83-113 254-282 (319)
312 cd01425 RPS2 Ribosomal protein 26.6 95 0.002 26.3 3.9 32 83-114 127-160 (193)
313 PF02776 TPP_enzyme_N: Thiamin 26.3 77 0.0017 26.1 3.3 31 316-348 63-99 (172)
314 TIGR00347 bioD dethiobiotin sy 26.3 1.6E+02 0.0034 23.9 5.2 33 83-115 99-140 (166)
315 cd03409 Chelatase_Class_II Cla 26.2 2.2E+02 0.0047 20.6 5.5 36 243-278 2-40 (101)
316 PRK00881 purH bifunctional pho 26.2 74 0.0016 31.4 3.5 84 1-92 17-105 (513)
317 PRK04539 ppnK inorganic polyph 25.9 1.3E+02 0.0029 27.5 5.0 57 313-387 64-124 (296)
318 PLN02293 adenine phosphoribosy 25.9 1.8E+02 0.004 24.5 5.4 29 83-111 62-92 (187)
319 COG0240 GpsA Glycerol-3-phosph 25.9 1.6E+02 0.0036 27.3 5.4 19 3-21 15-33 (329)
320 PF10820 DUF2543: Protein of u 25.9 2.2E+02 0.0048 19.4 4.6 41 378-427 37-77 (81)
321 PF01497 Peripla_BP_2: Peripla 25.7 1.1E+02 0.0024 26.4 4.4 32 83-114 60-93 (238)
322 PF00289 CPSase_L_chain: Carba 25.7 85 0.0018 23.8 3.1 66 258-335 13-88 (110)
323 PRK03708 ppnK inorganic polyph 25.5 95 0.0021 28.1 3.9 53 317-387 57-112 (277)
324 PF06204 CBM_X: Putative carbo 25.4 23 0.00051 24.0 -0.0 24 307-330 23-46 (66)
325 PLN03050 pyridoxine (pyridoxam 25.3 69 0.0015 28.4 2.9 18 2-19 77-94 (246)
326 COG0300 DltE Short-chain dehyd 25.1 68 0.0015 28.8 2.8 20 2-21 20-39 (265)
327 COG1619 LdcA Uncharacterized p 25.0 1.9E+02 0.0041 26.7 5.7 62 255-337 59-120 (313)
328 COG1435 Tdk Thymidine kinase [ 24.9 1.2E+02 0.0026 25.7 4.1 30 84-113 83-119 (201)
329 PRK03372 ppnK inorganic polyph 24.9 1.3E+02 0.0027 27.8 4.6 56 314-387 69-128 (306)
330 PF01012 ETF: Electron transfe 24.5 1.4E+02 0.0031 24.2 4.6 92 2-113 21-123 (164)
331 TIGR01743 purR_Bsub pur operon 24.4 1.7E+02 0.0036 26.4 5.1 31 83-113 128-160 (268)
332 PRK09213 pur operon repressor; 24.4 1.7E+02 0.0036 26.4 5.1 31 83-113 130-162 (271)
333 cd01147 HemV-2 Metal binding p 24.3 1.2E+02 0.0025 26.8 4.4 31 83-113 74-107 (262)
334 COG0859 RfaF ADP-heptose:LPS h 24.3 4.4E+02 0.0095 24.5 8.3 30 83-114 251-280 (334)
335 cd01980 Chlide_reductase_Y Chl 24.2 1.2E+02 0.0027 29.2 4.7 27 83-112 350-376 (416)
336 COG2894 MinD Septum formation 24.1 1.7E+02 0.0036 25.6 4.7 19 3-21 22-40 (272)
337 COG3660 Predicted nucleoside-d 24.0 3E+02 0.0064 24.8 6.3 60 307-369 234-298 (329)
338 cd01981 Pchlide_reductase_B Pc 24.0 1.1E+02 0.0024 29.7 4.3 27 83-112 370-396 (430)
339 TIGR00421 ubiX_pad polyprenyl 23.9 92 0.002 26.1 3.3 23 2-24 16-38 (181)
340 CHL00076 chlB photochlorophyll 23.9 1.1E+02 0.0024 30.6 4.3 26 83-111 374-399 (513)
341 PRK08558 adenine phosphoribosy 23.6 1.6E+02 0.0035 25.9 4.9 29 83-111 111-141 (238)
342 PRK05299 rpsB 30S ribosomal pr 23.6 1E+02 0.0022 27.5 3.7 31 83-113 157-189 (258)
343 KOG0780 Signal recognition par 23.5 1.5E+02 0.0032 28.3 4.6 23 3-25 120-142 (483)
344 PF04244 DPRP: Deoxyribodipyri 23.4 63 0.0014 28.2 2.3 21 1-21 51-71 (224)
345 TIGR01278 DPOR_BchB light-inde 23.3 1.1E+02 0.0025 30.4 4.4 27 83-112 364-390 (511)
346 PRK14075 pnk inorganic polypho 23.3 1.3E+02 0.0028 26.9 4.3 52 317-387 41-94 (256)
347 PRK12315 1-deoxy-D-xylulose-5- 23.3 7E+02 0.015 25.5 10.0 52 325-385 524-580 (581)
348 cd01143 YvrC Periplasmic bindi 23.2 1.4E+02 0.003 24.9 4.4 31 83-113 60-91 (195)
349 PF13460 NAD_binding_10: NADH( 23.0 83 0.0018 25.9 2.9 35 3-39 13-47 (183)
350 TIGR03845 sulfopyru_alph sulfo 23.0 1.6E+02 0.0035 23.9 4.5 25 322-346 62-91 (157)
351 COG2159 Predicted metal-depend 22.9 5.3E+02 0.012 23.5 8.3 68 254-335 141-210 (293)
352 COG2845 Uncharacterized protei 22.6 1.4E+02 0.0031 27.4 4.3 46 231-276 168-232 (354)
353 TIGR01744 XPRTase xanthine pho 22.5 2E+02 0.0043 24.4 5.1 31 83-113 50-82 (191)
354 PF03698 UPF0180: Uncharacteri 22.4 87 0.0019 22.2 2.4 19 3-21 12-30 (80)
355 PRK13016 dihydroxy-acid dehydr 22.4 1.6E+02 0.0035 29.6 5.0 47 64-114 100-150 (577)
356 PRK13017 dihydroxy-acid dehydr 22.1 1.7E+02 0.0037 29.6 5.2 48 63-114 104-155 (596)
357 PRK06456 acetolactate synthase 22.1 3.6E+02 0.0079 27.3 7.8 27 320-346 69-101 (572)
358 PF02558 ApbA: Ketopantoate re 22.1 89 0.0019 24.9 2.8 20 3-22 12-31 (151)
359 TIGR02114 coaB_strep phosphopa 21.9 86 0.0019 27.4 2.8 18 2-19 29-46 (227)
360 COG1090 Predicted nucleoside-d 21.8 88 0.0019 28.2 2.8 19 3-21 13-31 (297)
361 PRK07114 keto-hydroxyglutarate 21.8 5.4E+02 0.012 22.4 9.8 48 191-253 144-192 (222)
362 KOG0332 ATP-dependent RNA heli 21.7 77 0.0017 29.8 2.5 19 3-21 345-363 (477)
363 PRK02910 light-independent pro 21.7 1.3E+02 0.0029 30.1 4.5 26 83-111 362-387 (519)
364 PF07319 DnaI_N: Primosomal pr 21.7 81 0.0018 23.1 2.3 10 378-387 22-31 (94)
365 TIGR01011 rpsB_bact ribosomal 21.7 1.2E+02 0.0027 26.4 3.7 31 83-113 155-187 (225)
366 COG0541 Ffh Signal recognition 21.4 1.5E+02 0.0032 28.7 4.3 24 3-26 119-142 (451)
367 PRK14098 glycogen synthase; Pr 21.4 78 0.0017 31.4 2.8 19 3-21 30-48 (489)
368 PF00920 ILVD_EDD: Dehydratase 21.4 1.3E+02 0.0028 29.9 4.1 47 65-115 65-115 (521)
369 CHL00067 rps2 ribosomal protei 21.3 1.2E+02 0.0027 26.5 3.7 31 83-113 161-193 (230)
370 TIGR00781 ccoO cytochrome c ox 21.3 2.3E+02 0.005 24.7 5.1 86 342-428 134-220 (232)
371 PRK06131 dihydroxy-acid dehydr 21.3 1.9E+02 0.0041 29.2 5.2 47 64-114 96-146 (571)
372 PRK07092 benzoylformate decarb 21.3 2.3E+02 0.0051 28.4 6.2 27 320-346 74-106 (530)
373 cd03466 Nitrogenase_NifN_2 Nit 21.2 1.4E+02 0.003 29.1 4.4 26 83-111 372-397 (429)
374 PRK04148 hypothetical protein; 21.1 98 0.0021 24.5 2.7 17 3-19 30-46 (134)
375 cd01976 Nitrogenase_MoFe_alpha 21.1 1E+02 0.0022 29.9 3.4 26 83-111 369-394 (421)
376 PRK00911 dihydroxy-acid dehydr 21.1 1.9E+02 0.0042 29.0 5.2 46 65-114 95-144 (552)
377 PRK12448 dihydroxy-acid dehydr 21.0 1.9E+02 0.0042 29.3 5.2 46 65-114 97-146 (615)
378 TIGR00110 ilvD dihydroxy-acid 20.9 1.9E+02 0.0042 28.8 5.2 46 65-114 75-124 (535)
379 PRK07710 acetolactate synthase 20.9 2.4E+02 0.0052 28.6 6.2 28 319-346 78-111 (571)
380 PRK10239 2-amino-4-hydroxy-6-h 20.9 2E+02 0.0042 23.6 4.5 27 243-269 3-29 (159)
381 TIGR01761 thiaz-red thiazoliny 20.8 3.9E+02 0.0084 25.1 7.1 78 307-387 52-136 (343)
382 COG0297 GlgA Glycogen synthase 20.8 4E+02 0.0088 26.4 7.4 115 297-423 345-473 (487)
383 COG0299 PurN Folate-dependent 20.8 2.1E+02 0.0045 24.3 4.6 106 255-384 63-172 (200)
384 COG3349 Uncharacterized conser 20.8 79 0.0017 31.1 2.5 21 2-22 13-33 (485)
385 COG0381 WecB UDP-N-acetylgluco 20.7 2.4E+02 0.0053 26.8 5.6 31 83-113 92-125 (383)
386 cd01965 Nitrogenase_MoFe_beta_ 20.6 1.4E+02 0.003 29.0 4.3 26 83-111 371-396 (428)
387 PRK11914 diacylglycerol kinase 20.6 5.5E+02 0.012 23.4 8.1 28 318-347 65-96 (306)
388 COG0287 TyrA Prephenate dehydr 20.5 4.2E+02 0.009 24.0 7.0 22 3-24 17-38 (279)
389 PRK11199 tyrA bifunctional cho 20.5 3E+02 0.0065 26.2 6.4 18 3-20 113-130 (374)
390 PRK14099 glycogen synthase; Pr 20.4 84 0.0018 31.1 2.7 19 3-21 28-46 (485)
391 TIGR01918 various_sel_PB selen 20.4 1.4E+02 0.0031 28.6 4.0 29 83-111 76-114 (431)
392 COG0569 TrkA K+ transport syst 20.3 89 0.0019 27.2 2.6 20 2-21 13-32 (225)
393 PF09884 DUF2111: Uncharacteri 20.2 35 0.00075 24.1 0.0 20 331-350 50-69 (84)
394 COG2085 Predicted dinucleotide 20.2 1.1E+02 0.0023 26.4 2.9 19 3-21 15-33 (211)
395 TIGR01917 gly_red_sel_B glycin 20.2 1.4E+02 0.0031 28.6 4.0 29 83-111 76-114 (431)
396 TIGR02329 propionate_PrpR prop 20.1 1.7E+02 0.0038 29.3 4.9 39 67-113 134-172 (526)
No 1
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.7e-73 Score=540.75 Aligned_cols=425 Identities=50% Similarity=0.857 Sum_probs=337.5
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCC-CCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHccC
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPS-NHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQM 79 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~-~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 79 (428)
|++||+.|++||+.|||++|+.+..... ..++|+|..+|+++|++.........++..+...+...++++++++..+.
T Consensus 24 ~l~LAk~La~~G~~VT~v~T~~n~~~~~~~~~~i~~~~ip~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~- 102 (451)
T PLN02410 24 MMQLAKTLHLKGFSITIAQTKFNYFSPSDDFTDFQFVTIPESLPESDFKNLGPIEFLHKLNKECQVSFKDCLGQLVLQQ- 102 (451)
T ss_pred HHHHHHHHHcCCCEEEEEeCcccccccccCCCCeEEEeCCCCCCcccccccCHHHHHHHHHHHhHHHHHHHHHHHHhcc-
Confidence 6899999999999999999998763221 22479999999998875322223345555566677778888888875422
Q ss_pred CCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCC-CCCCCC-CCCCCCCCCCCCCCCCCCC
Q 014232 80 PADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGS-IPLQDP-SNLADPVPRLQPLRFKDLP 157 (428)
Q Consensus 80 ~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~-~~~~~~~~~~~~~~~~~~~ 157 (428)
.. +++|||+|.++.|+.++|+++|||++.|++++++.++.+.+++....... .|.... ......+|+++.++..+++
T Consensus 103 ~~-p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp 181 (451)
T PLN02410 103 GN-EIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQNELVPEFHPLRCKDFP 181 (451)
T ss_pred CC-CcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCccccccCccccCCCCCCCChHHCc
Confidence 12 67999999999999999999999999999999998877766543332211 222110 1111247787777777777
Q ss_pred CCcCCCChHHHHHHHhhhccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCCCCCCCCCccccchhhhhccc
Q 014232 158 FSQFGLPENFLQLIPKIYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFAPSSPGSLLKEDTSCISWLNN 237 (428)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~ 237 (428)
.............+.......+++++++|||++||+.++++++..+++++++|||++...+. ..+....+.+|.+|||+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~-~~~~~~~~~~~~~wLd~ 260 (451)
T PLN02410 182 VSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASA-PTSLLEENKSCIEWLNK 260 (451)
T ss_pred chhcCCcHHHHHHHHHHhhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCC-CccccccchHHHHHHHh
Confidence 53222222233333332235678999999999999999999988777789999999864321 11112233468999999
Q ss_pred CCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHhhhcc
Q 014232 238 QAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSH 317 (428)
Q Consensus 238 ~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~iL~~ 317 (428)
+++++||||||||+..++.+++.+++.+|+.++++|||+++.+...+.++...+|++|.+++++|+++++|+||.+||+|
T Consensus 261 ~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h 340 (451)
T PLN02410 261 QKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSH 340 (451)
T ss_pred CCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCC
Confidence 99999999999999999999999999999999999999998532111122234899999999999999999999999999
Q ss_pred CCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCchhHHHHHHH
Q 014232 318 IAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKEGQEMRQRA 397 (428)
Q Consensus 318 ~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a 397 (428)
+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+.+.++.++|+++|+++|+++++++||+||
T Consensus 341 ~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v~~av~~lm~~~~~~~~r~~a 420 (451)
T PLN02410 341 PAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERAVKRLMVEEEGEEMRKRA 420 (451)
T ss_pred CccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999877799999987899999999999999887778999999
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHhhcC
Q 014232 398 KNLKEDVELCIKESGSSSSSLNKFLEFFNLF 428 (428)
Q Consensus 398 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 428 (428)
+++++.+++|+.++||+..++++|++.+..|
T Consensus 421 ~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~~ 451 (451)
T PLN02410 421 ISLKEQLRASVISGGSSHNSLEEFVHFMRTL 451 (451)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998765
No 2
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=7.6e-70 Score=518.74 Aligned_cols=418 Identities=29% Similarity=0.549 Sum_probs=332.0
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCC-------------CCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSN-------------HPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPF 67 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~-------------~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 67 (428)
|++||+.|++||..|||++|+.+...+.. ...++|..+|+++|++.+...+...++..+...+.+.+
T Consensus 24 ml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~~~~~~~~~~~~~~~~~~~~~~~l 103 (480)
T PLN02555 24 LLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAEDDPRRQDLDLYLPQLELVGKREI 103 (480)
T ss_pred HHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCCCcccccCHHHHHHHHHHhhhHHH
Confidence 68999999999999999999976643210 11367777888888765433345555666655677788
Q ss_pred HHHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCC--CCCCCCC
Q 014232 68 HKCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDP--SNLADPV 145 (428)
Q Consensus 68 ~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~ 145 (428)
+++++++.... + +++|||+|.++.|+.++|+++|||.++|++++++.++.+.+++ .+..+.... ......+
T Consensus 104 ~~~l~~~~~~~--~-pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~----~~~~~~~~~~~~~~~~~i 176 (480)
T PLN02555 104 PNLVKRYAEQG--R-PVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYY----HGLVPFPTETEPEIDVQL 176 (480)
T ss_pred HHHHHHHhccC--C-CceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHh----hcCCCcccccCCCceeec
Confidence 88887764322 2 4599999999999999999999999999999999888777653 222221110 1112357
Q ss_pred CCCCCCCCCCCCCCcCC--CChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCCCC--C
Q 014232 146 PRLQPLRFKDLPFSQFG--LPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFAPS--S 220 (428)
Q Consensus 146 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~~~--~ 220 (428)
|+++.++.++++..... ..+...+.+.+ .+...+++++++|||++||+.+++.+++.. +++.|||+...... .
T Consensus 177 Pglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~--~v~~iGPl~~~~~~~~~ 254 (480)
T PLN02555 177 PCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLC--PIKPVGPLFKMAKTPNS 254 (480)
T ss_pred CCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCC--CEEEeCcccCccccccc
Confidence 88888888888864321 22333444444 556678899999999999999999987743 49999999754211 0
Q ss_pred --CCCCccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHh
Q 014232 221 --PGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEA 298 (428)
Q Consensus 221 --~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~ 298 (428)
+...+..+.+|.+|||++++++||||||||+..++.+++.+++.+|+..+++|||+++..........+.+|+++.++
T Consensus 255 ~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~ 334 (480)
T PLN02555 255 DVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEK 334 (480)
T ss_pred cccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhh
Confidence 011123345699999999889999999999999999999999999999999999999843111000013488999889
Q ss_pred hCCCceEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC-----C-cc
Q 014232 299 VGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE-----N-DL 372 (428)
Q Consensus 299 ~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~-----~-~~ 372 (428)
.++|+++++|+||.+||.|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+. . .+
T Consensus 335 ~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v 414 (480)
T PLN02555 335 AGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLI 414 (480)
T ss_pred cCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999998789999993 2 58
Q ss_pred CHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 373 EKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 373 ~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
+.++|.++|+++|++++++++|+||++|++..++|++++|||..++++|++.+.+
T Consensus 415 ~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~ 469 (480)
T PLN02555 415 TREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVR 469 (480)
T ss_pred cHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 9999999999999887788999999999999999999999999999999999863
No 3
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.3e-68 Score=506.16 Aligned_cols=403 Identities=27% Similarity=0.497 Sum_probs=323.0
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCC--CCCCceEEEcCCCCCCCC-CCcCCHHHHHHHHHHhhchhHHHHHHHHHHc
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPS--NHPKFSFQSIPEGLADDD-IYSGNIIAIIMHLNANCGAPFHKCLVQMMKQ 77 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~--~~~gi~f~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 77 (428)
|++||+.|+++|+.|||++|+.+..... ..++|+|+.+|+++|++. +...++..++..+...+.+.++++++++...
T Consensus 22 ~l~lAk~La~~G~~vT~v~t~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 101 (449)
T PLN02173 22 IRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSPISIATISDGYDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQST 101 (449)
T ss_pred HHHHHHHHHcCCCEEEEEECCchhhhcccCCCCCEEEEEcCCCCCCcccccccCHHHHHHHHHHhhhHHHHHHHHHhhcc
Confidence 6899999999999999999997764432 224699999999998743 4344566666767667888888888876543
Q ss_pred cCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014232 78 QMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQPLRFKDLP 157 (428)
Q Consensus 78 ~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 157 (428)
. + +.+|||+|.+++|+.++|+++|||++.|++++++.+..+.+ ... .. ......+++++.++.++++
T Consensus 102 ~--~-Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~-~~~-~~--------~~~~~~~pg~p~l~~~dlp 168 (449)
T PLN02173 102 D--N-PITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYL-SYI-NN--------GSLTLPIKDLPLLELQDLP 168 (449)
T ss_pred C--C-CceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHh-HHh-cc--------CCccCCCCCCCCCChhhCC
Confidence 2 1 34999999999999999999999999999998877655432 111 11 0112336777777888888
Q ss_pred CCcCC--CChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCCC------CCCC---CCc
Q 014232 158 FSQFG--LPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFAP------SSPG---SLL 225 (428)
Q Consensus 158 ~~~~~--~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~~------~~~~---~~~ 225 (428)
..... ......+.+.+ .+...+++.+++||+++||+.++++++.. .+++.|||++.... .... +.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~--~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~ 246 (449)
T PLN02173 169 TFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV--CPVLTIGPTVPSMYLDQQIKSDNDYDLNLF 246 (449)
T ss_pred hhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc--CCeeEEcccCchhhcccccccccccccccc
Confidence 64322 22223343434 55677889999999999999999998763 36999999974210 0000 111
Q ss_pred --cccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhh-CCC
Q 014232 226 --KEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAV-GEN 302 (428)
Q Consensus 226 --~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~-~~~ 302 (428)
..+.+|.+|||.+++++||||||||+..++.+++.+++.+| .+.+|||+++... .+.+|+++.+++ ++|
T Consensus 247 ~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~------~~~lp~~~~~~~~~~~ 318 (449)
T PLN02173 247 DLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASE------ESKLPPGFLETVDKDK 318 (449)
T ss_pred ccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccc------hhcccchHHHhhcCCc
Confidence 22345999999999999999999999999999999999999 6788999998531 123888998888 578
Q ss_pred ceEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC-----ccCHHHH
Q 014232 303 GCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN-----DLEKGEV 377 (428)
Q Consensus 303 ~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~-----~~~~~~l 377 (428)
+++++|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+.. .++.++|
T Consensus 319 ~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v 398 (449)
T PLN02173 319 SLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEI 398 (449)
T ss_pred eEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987899988852 3699999
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 378 EKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 378 ~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
.++|+++|.+++++++|+||+++++..++|++++||+..++++|++.+.
T Consensus 399 ~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 399 EFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 9999999998778899999999999999999999999999999999874
No 4
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=2.3e-68 Score=508.62 Aligned_cols=409 Identities=29% Similarity=0.488 Sum_probs=321.4
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSN----HPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMK 76 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~----~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 76 (428)
|++||+.|+++|++|||++++.+.+.+.. .++|+|+.+|++++++. ..+...++..+...+.+.+.++++++..
T Consensus 23 mL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~~~~i~~v~lp~g~~~~~--~~~~~~l~~a~~~~~~~~l~~ll~~l~~ 100 (448)
T PLN02562 23 MLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSISDGQDDDP--PRDFFSIENSMENTMPPQLERLLHKLDE 100 (448)
T ss_pred HHHHHHHHHhCCCEEEEEeCcchhhhhhhccCCCCCEEEEECCCCCCCCc--cccHHHHHHHHHHhchHHHHHHHHHhcC
Confidence 68999999999999999999987643321 23799999998776432 1233344444444677778888877643
Q ss_pred ccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCC-CC--CCCCCCCCCCCCCC
Q 014232 77 QQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQD-PS--NLADPVPRLQPLRF 153 (428)
Q Consensus 77 ~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~--~~~~~~~~~~~~~~ 153 (428)
.. +++|||+|.++.|+.++|+++|||+++|++++++.++.+.+++.....+..+... .. .....+|+++.++.
T Consensus 101 ~~----pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~l~~ 176 (448)
T PLN02562 101 DG----EVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPLLST 176 (448)
T ss_pred CC----CcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccccccccccccccccCCCCCCCCh
Confidence 22 5699999999999999999999999999999988877766655433322221111 00 11124678777788
Q ss_pred CCCCCCcCCC--ChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhh----CCCCcceeccCCCCCCCC--CCCC
Q 014232 154 KDLPFSQFGL--PENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQ----CNIPIFPVGPLHKFAPSS--PGSL 224 (428)
Q Consensus 154 ~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~----~~~~v~~vGpl~~~~~~~--~~~~ 224 (428)
++++...... .....+.+.+ .+...+++.+++|||.+||+..++..+.. ..++++.|||++...... ....
T Consensus 177 ~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~~~~~~~ 256 (448)
T PLN02562 177 EDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATTITKPSF 256 (448)
T ss_pred hhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccccCCCcc
Confidence 8888643222 2233444555 66677889999999999999888876542 235699999998754210 1112
Q ss_pred ccccchhhhhcccCCCCcEEEEEecccc-cCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCc
Q 014232 225 LKEDTSCISWLNNQAPNSVLYVSLGSIV-SMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENG 303 (428)
Q Consensus 225 ~~~~~~~~~~l~~~~~~~vv~vsfGS~~-~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 303 (428)
++.+.+|.+|||++++++||||||||+. .++.+++++++.+|+.++++|||+++.+.. +.+|+++.++.++|+
T Consensus 257 ~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~------~~l~~~~~~~~~~~~ 330 (448)
T PLN02562 257 WEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVWR------EGLPPGYVERVSKQG 330 (448)
T ss_pred ccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCch------hhCCHHHHHHhccCE
Confidence 3455568899999988999999999987 589999999999999999999999975321 238889999999999
Q ss_pred eEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHH
Q 014232 304 CVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQ 383 (428)
Q Consensus 304 ~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~ 383 (428)
++++|+||.+||+|+++|+||||||||||+||+++|||||++|+++||+.||+++++.+|+|+.+. +++.++|.++|++
T Consensus 331 ~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-~~~~~~l~~~v~~ 409 (448)
T PLN02562 331 KVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS-GFGQKEVEEGLRK 409 (448)
T ss_pred EEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC-CCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987679999986 4899999999999
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 384 LMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 384 vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
+|+| ++||+||+++++.++++ +++|||+.++++|++.+.
T Consensus 410 ~l~~---~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 410 VMED---SGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HhCC---HHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 9998 89999999999998876 567999999999999863
No 5
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=3.4e-68 Score=505.98 Aligned_cols=413 Identities=31% Similarity=0.520 Sum_probs=318.0
Q ss_pred CHHHHHHHH-hCCCeEEEEeCCCCCCCC----CCCCCceEEEcCC----CCCCCCCCcCCHHHHHHHHHHhhchhHHHHH
Q 014232 1 MLQLGTILY-SKGFSITVVHTDFNSPNP----SNHPKFSFQSIPE----GLADDDIYSGNIIAIIMHLNANCGAPFHKCL 71 (428)
Q Consensus 1 ~l~La~~L~-~rGh~Vt~~~~~~~~~~~----~~~~gi~f~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 71 (428)
|++||+.|+ ++|+.|||++|+.+...+ ...++|.++.+|. ++|+.. .+....+......+.+.+++++
T Consensus 22 ~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp~p~~~glp~~~---~~~~~~~~~~~~~~~~~~~~~l 98 (481)
T PLN02992 22 VIELGKRLSANHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPSPDISGLVDPS---AHVVTKIGVIMREAVPTLRSKI 98 (481)
T ss_pred HHHHHHHHHhCCCcEEEEEeCCCchhhhhhccccCCCceEEECCCccccCCCCCC---ccHHHHHHHHHHHhHHHHHHHH
Confidence 689999998 799999999999876432 1123699999984 443211 1222223333344555666666
Q ss_pred HHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCCCC
Q 014232 72 VQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQPL 151 (428)
Q Consensus 72 ~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 151 (428)
+++ . . +++|||+|.+++|+.++|+++|||++.|++++++.++.+.+++........+... ......+|+++.+
T Consensus 99 ~~~--~---~-~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iPg~~~l 171 (481)
T PLN02992 99 AEM--H---Q-KPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTV-QRKPLAMPGCEPV 171 (481)
T ss_pred Hhc--C---C-CCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhcccccccccc-CCCCcccCCCCcc
Confidence 554 1 2 6899999999999999999999999999999998877666554321111001000 0112347788777
Q ss_pred CCCCCCCCcCCCChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhh--C----CCCcceeccCCCCCCCCCCCC
Q 014232 152 RFKDLPFSQFGLPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQ--C----NIPIFPVGPLHKFAPSSPGSL 224 (428)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~--~----~~~v~~vGpl~~~~~~~~~~~ 224 (428)
+..+++.............+.+ .....+++.+++||+++||+.+++++++. + .++++.|||+...... .
T Consensus 172 ~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~~---~- 247 (481)
T PLN02992 172 RFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQS---S- 247 (481)
T ss_pred CHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcCC---C-
Confidence 8888874322233333444444 55667889999999999999999998752 1 2579999999763221 1
Q ss_pred ccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCC----------C---Cc-cccC
Q 014232 225 LKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTS----------A---SS-GIEL 290 (428)
Q Consensus 225 ~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~----------~---~~-~~~~ 290 (428)
..+.+|.+|||++++++||||||||+..++.+++++++.+|+.++++|||+++..... . .+ ..+.
T Consensus 248 -~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (481)
T PLN02992 248 -KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEY 326 (481)
T ss_pred -cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhh
Confidence 2344599999999889999999999999999999999999999999999999742100 0 00 0124
Q ss_pred CchhHHHhhCCCceEE-eecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC
Q 014232 291 LPEGFEEAVGENGCVV-KWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE 369 (428)
Q Consensus 291 ~p~~~~~~~~~~~~v~-~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~ 369 (428)
+|+||.+|+.++++++ +|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.++
T Consensus 327 lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~ 406 (481)
T PLN02992 327 LPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSD 406 (481)
T ss_pred CCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEec
Confidence 8999999998877765 999999999999999999999999999999999999999999999999999964589999996
Q ss_pred C---ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHh--cCCChHHHHHHHHHHhhcC
Q 014232 370 N---DLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIK--ESGSSSSSLNKFLEFFNLF 428 (428)
Q Consensus 370 ~---~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~--~~g~~~~~~~~~~~~~~~~ 428 (428)
. .++.++|.++|+++|.++++++||++|+++++..++|+. +||||..++++|++.+.++
T Consensus 407 ~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~ 470 (481)
T PLN02992 407 DPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRF 470 (481)
T ss_pred CCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHH
Confidence 4 489999999999999987788999999999999999994 5999999999999998763
No 6
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=4.1e-67 Score=497.69 Aligned_cols=419 Identities=23% Similarity=0.377 Sum_probs=317.7
Q ss_pred CHHHHHHHHhCC--CeEEEEeCCCCCC-C----C----CCCCCceEEEcCCCCC-CCCCCcCCHHHHHHHHHHhhchhHH
Q 014232 1 MLQLGTILYSKG--FSITVVHTDFNSP-N----P----SNHPKFSFQSIPEGLA-DDDIYSGNIIAIIMHLNANCGAPFH 68 (428)
Q Consensus 1 ~l~La~~L~~rG--h~Vt~~~~~~~~~-~----~----~~~~gi~f~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~ 68 (428)
|++||+.|++|| ..|||++++.+.. . . ...++|+|+.+|+..+ +......+....+..+...+.+.+.
T Consensus 20 ~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (468)
T PLN02207 20 FLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEEKPTLGGTQSVEAYVYDVIEKNIPLVR 99 (468)
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCCCCccccccCHHHHHHHHHHhcchhHH
Confidence 689999999998 9999999997651 1 1 1123699999996432 1101123444444444455655555
Q ss_pred HHHHHHHHcc--CCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhc-CCCCCCCCCCCCCCC
Q 014232 69 KCLVQMMKQQ--MPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKED-GSIPLQDPSNLADPV 145 (428)
Q Consensus 69 ~~l~~l~~~~--~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~ 145 (428)
+.++++.++. +.+ +++|||+|.+++|+.++|+++|||.+.|++++++.++.+.+.+..... ...+... ......+
T Consensus 100 ~~~~~~l~~~~~~~~-pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v 177 (468)
T PLN02207 100 NIVMDILSSLALDGV-KVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRN-SEEMLSI 177 (468)
T ss_pred HHHHHHHHHhccCCC-CeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhccccccccCcCC-CCCeEEC
Confidence 5555543321 012 359999999999999999999999999999999888877665432111 0011101 0111347
Q ss_pred CCC-CCCCCCCCCCCcCCCChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHh-hCCCCcceeccCCCCCCCCCC
Q 014232 146 PRL-QPLRFKDLPFSQFGLPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQ-QCNIPIFPVGPLHKFAPSSPG 222 (428)
Q Consensus 146 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~-~~~~~v~~vGpl~~~~~~~~~ 222 (428)
|++ +.++..+++....... . ...+.+ .....+++++++||+++||+++++.++. ...++++.|||++........
T Consensus 178 Pgl~~~l~~~dlp~~~~~~~-~-~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~ 255 (468)
T PLN02207 178 PGFVNPVPANVLPSALFVED-G-YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHP 255 (468)
T ss_pred CCCCCCCChHHCcchhcCCc-c-HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCC
Confidence 887 5788888886432211 1 222333 5557789999999999999999988865 233569999999864321000
Q ss_pred C-CccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCC
Q 014232 223 S-LLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGE 301 (428)
Q Consensus 223 ~-~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~ 301 (428)
. ....+.+|.+|||++++++||||||||+..++.+++++++.+|+.++++|||+++...... .+.+|++|.++.++
T Consensus 256 ~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~~~---~~~lp~~f~er~~~ 332 (468)
T PLN02207 256 EQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVTN---DDLLPEGFLDRVSG 332 (468)
T ss_pred ccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCccc---cccCCHHHHhhcCC
Confidence 0 0112346999999998899999999999999999999999999999999999998532111 13489999999999
Q ss_pred CceEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC--------CccC
Q 014232 302 NGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE--------NDLE 373 (428)
Q Consensus 302 ~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~--------~~~~ 373 (428)
|+++++|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+. ..++
T Consensus 333 ~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~ 412 (468)
T PLN02207 333 RGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVN 412 (468)
T ss_pred CeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCccc
Confidence 99999999999999999999999999999999999999999999999999999998877789999762 1369
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 374 KGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 374 ~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
.++|.++|+++|++ ++++||+||+++++.+++|+.++|||+.++++|++.+..
T Consensus 413 ~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~ 465 (468)
T PLN02207 413 ANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIG 465 (468)
T ss_pred HHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 99999999999973 348999999999999999999999999999999999864
No 7
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=3.9e-67 Score=496.91 Aligned_cols=407 Identities=26% Similarity=0.448 Sum_probs=320.5
Q ss_pred CHHHHHHHHh-CCCeEEEEeCCCCC-CC-C---CCCCCceEEEcCCCCCCCCCC-cCCHHHHHHHHHHhhchhHHHHHHH
Q 014232 1 MLQLGTILYS-KGFSITVVHTDFNS-PN-P---SNHPKFSFQSIPEGLADDDIY-SGNIIAIIMHLNANCGAPFHKCLVQ 73 (428)
Q Consensus 1 ~l~La~~L~~-rGh~Vt~~~~~~~~-~~-~---~~~~gi~f~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~ 73 (428)
|++||+.|++ +|+.|||++|+.+. .. . ...++++|+.+++++|++... ..+....+..+...+.+.+.+++++
T Consensus 20 ~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~~~~~~i~~~~i~dglp~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 99 (455)
T PLN02152 20 SLRFARRLIKTTGTRVTFATCLSVIHRSMIPNHNNVENLSFLTFSDGFDDGVISNTDDVQNRLVNFERNGDKALSDFIEA 99 (455)
T ss_pred HHHHHHHHhhCCCcEEEEEeccchhhhhhhccCCCCCCEEEEEcCCCCCCccccccccHHHHHHHHHHhccHHHHHHHHH
Confidence 6899999996 79999999998642 21 1 112369999999988876432 3455566666777888889998888
Q ss_pred HHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCCCCCC
Q 014232 74 MMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQPLRF 153 (428)
Q Consensus 74 l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 153 (428)
+.... + +++|||+|.+++|+.++|+++|||.+.|++++++.++.+++++... . ....+|+++.++.
T Consensus 100 l~~~~--~-pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~--------~---~~~~iPglp~l~~ 165 (455)
T PLN02152 100 NLNGD--S-PVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGN--------N---SVFEFPNLPSLEI 165 (455)
T ss_pred hhccC--C-CceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccC--------C---CeeecCCCCCCch
Confidence 75332 2 5699999999999999999999999999999999888776643110 0 1124778877888
Q ss_pred CCCCCCcCC--CChHHHHHHHh-hhccC--CccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCCC--CCC-CC--
Q 014232 154 KDLPFSQFG--LPENFLQLIPK-IYNVR--TSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFAP--SSP-GS-- 223 (428)
Q Consensus 154 ~~~~~~~~~--~~~~~~~~~~~-~~~~~--~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~~--~~~-~~-- 223 (428)
++++..... ..+...+.+.+ .+... .++.+++|||++||+..+++++. .+++.|||+..... ... ..
T Consensus 166 ~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~---~~v~~VGPL~~~~~~~~~~~~~~~ 242 (455)
T PLN02152 166 RDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN---IEMVAVGPLLPAEIFTGSESGKDL 242 (455)
T ss_pred HHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc---CCEEEEcccCccccccccccCccc
Confidence 888864321 12223344434 33332 34699999999999999998865 36999999975321 100 01
Q ss_pred C-ccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCC-----CCc-cccCCchhHH
Q 014232 224 L-LKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTS-----ASS-GIELLPEGFE 296 (428)
Q Consensus 224 ~-~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~-----~~~-~~~~~p~~~~ 296 (428)
. .+.+.+|.+|||++++++||||||||+..++.+++++++.+|+.++++|||+++..... ..+ ..-.+|+++.
T Consensus 243 ~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~ 322 (455)
T PLN02152 243 SVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFR 322 (455)
T ss_pred cccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHH
Confidence 1 12344699999999889999999999999999999999999999999999999853210 000 0112578999
Q ss_pred HhhCCCceEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC--C--cc
Q 014232 297 EAVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE--N--DL 372 (428)
Q Consensus 297 ~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~--~--~~ 372 (428)
++.++|+++++|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+. . .+
T Consensus 323 e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 402 (455)
T PLN02152 323 HELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLV 402 (455)
T ss_pred HhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999988667777764 2 46
Q ss_pred CHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 014232 373 EKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFF 425 (428)
Q Consensus 373 ~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 425 (428)
+.++|+++|+++|++ ++.+||+||+++++..++++.++|+|+.++++|++.+
T Consensus 403 ~~e~l~~av~~vm~~-~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 403 ERGEIRRCLEAVMEE-KSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred cHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 999999999999975 3467999999999999999999999999999999976
No 8
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.9e-67 Score=499.24 Aligned_cols=412 Identities=26% Similarity=0.423 Sum_probs=310.8
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCC-----CCCCceEEEcC----CCCCCCCCCcCCHH----HHHHHHHHhhchhH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPS-----NHPKFSFQSIP----EGLADDDIYSGNII----AIIMHLNANCGAPF 67 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~-----~~~gi~f~~l~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~l 67 (428)
|++||+.|++||+.|||++|+.+..... ..++|+++.+| +++|++.+...+.. ..+......+.+.+
T Consensus 23 ~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (472)
T PLN02670 23 FLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPSSAESSTDVPYTKQQLLKKAFDLLEPPL 102 (472)
T ss_pred HHHHHHHHHhCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCCCcccccccchhhHHHHHHHHHHhHHHH
Confidence 6899999999999999999998764432 11369999998 67887654433332 12223333444444
Q ss_pred HHHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCC
Q 014232 68 HKCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPR 147 (428)
Q Consensus 68 ~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 147 (428)
++++++ . +++|||+|.++.|+.++|+++|||++.|++++++.++.+.+.......+..+... ..+ ..+++
T Consensus 103 ~~~l~~----~----~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~p~ 172 (472)
T PLN02670 103 TTFLET----S----KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTA-EDF-TVVPP 172 (472)
T ss_pred HHHHHh----C----CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCcc-ccc-cCCCC
Confidence 444433 3 6899999999999999999999999999999998877765432222222222111 111 11333
Q ss_pred C-C-----CCCCCCCCCCcCC--CChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCC-
Q 014232 148 L-Q-----PLRFKDLPFSQFG--LPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFA- 217 (428)
Q Consensus 148 ~-~-----~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~- 217 (428)
. + .++..+++..... ........+.+ .....+++++++|||++||+.++++++..++++++.|||+....
T Consensus 173 ~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~ 252 (472)
T PLN02670 173 WVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIE 252 (472)
T ss_pred cCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 2 1 1344565543211 11112222223 44566789999999999999999999886667899999997531
Q ss_pred CCCCCCCc--cccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhH
Q 014232 218 PSSPGSLL--KEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGF 295 (428)
Q Consensus 218 ~~~~~~~~--~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~ 295 (428)
........ ..+.+|.+|||++++++||||||||+..++.+++.+++.+|+.++++|||+++..........+.+|++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f 332 (472)
T PLN02670 253 DDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGF 332 (472)
T ss_pred ccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHH
Confidence 11000100 1124599999999889999999999999999999999999999999999999853111101123589999
Q ss_pred HHhhCCCceEE-eecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC----
Q 014232 296 EEAVGENGCVV-KWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN---- 370 (428)
Q Consensus 296 ~~~~~~~~~v~-~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~---- 370 (428)
.+++.++++++ +|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++ +|+|+.++.
T Consensus 333 ~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~Gv~l~~~~~~ 411 (472)
T PLN02670 333 EERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKLGLEVPRDERD 411 (472)
T ss_pred HHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCeeEEeeccccC
Confidence 99998888875 999999999999999999999999999999999999999999999999999976 799999963
Q ss_pred -ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 371 -DLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 371 -~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
.++.++|+++|+++|.+++|++||+||+++++.++ +.++...++++|++++.+
T Consensus 412 ~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~----~~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 412 GSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFG----DMDRNNRYVDELVHYLRE 465 (472)
T ss_pred CcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----CcchhHHHHHHHHHHHHH
Confidence 48999999999999988777899999999999998 789999999999999875
No 9
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=4.4e-67 Score=500.27 Aligned_cols=406 Identities=28% Similarity=0.476 Sum_probs=313.9
Q ss_pred CHHHHHH--HHhCCCeEEEEeCCCCCCCCCC----CCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHH
Q 014232 1 MLQLGTI--LYSKGFSITVVHTDFNSPNPSN----HPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQM 74 (428)
Q Consensus 1 ~l~La~~--L~~rGh~Vt~~~~~~~~~~~~~----~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 74 (428)
||+||++ |++||+.|||++|+.+...+.. ...+++..+|+++|++.. .+...++..+...+.+.+.+++
T Consensus 25 ~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~--~~~~~~~~~~~~~~~~~l~~~l--- 99 (456)
T PLN02210 25 MLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFFSDGLPKDDP--RAPETLLKSLNKVGAKNLSKII--- 99 (456)
T ss_pred HHHHHHHHHhhcCCcEEEEEeccchhhhhccccCCCCceEEEECCCCCCCCcc--cCHHHHHHHHHHhhhHHHHHHH---
Confidence 6899999 5699999999999987654332 236888888888887653 2344444444444444444443
Q ss_pred HHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q 014232 75 MKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQPLRFK 154 (428)
Q Consensus 75 ~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 154 (428)
+.. ++||||+|.++.|+..+|+++|||.+.|++.+++.++.+.+++.. ....+..........+|+++.++.+
T Consensus 100 -~~~----~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~--~~~~~~~~~~~~~~~~Pgl~~~~~~ 172 (456)
T PLN02210 100 -EEK----RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMK--TNSFPDLEDLNQTVELPALPLLEVR 172 (456)
T ss_pred -hcC----CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhc--cCCCCcccccCCeeeCCCCCCCChh
Confidence 333 799999999999999999999999999999999888776654321 1111111100011246777777777
Q ss_pred CCCCCcCCCChHHH-HHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCC---CCC----C---C
Q 014232 155 DLPFSQFGLPENFL-QLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFA---PSS----P---G 222 (428)
Q Consensus 155 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~---~~~----~---~ 222 (428)
+++........... ..+.+ .+...+++.+++||+++||+.+++++++ . +++++|||++... ... . .
T Consensus 173 dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~ 250 (456)
T PLN02210 173 DLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMAD-L-KPVIPIGPLVSPFLLGDDEEETLDGKNL 250 (456)
T ss_pred hCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhh-c-CCEEEEcccCchhhcCcccccccccccc
Confidence 87754322222222 22223 3445677899999999999999999877 3 5799999997521 100 0 0
Q ss_pred CCccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhh-CC
Q 014232 223 SLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAV-GE 301 (428)
Q Consensus 223 ~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~-~~ 301 (428)
..+..+.+|.+|||++++++||||||||+...+.+++++++.+|+.++++|||+++.... ...+..+.++. ++
T Consensus 251 ~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~------~~~~~~~~~~~~~~ 324 (456)
T PLN02210 251 DMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEK------AQNVQVLQEMVKEG 324 (456)
T ss_pred cccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcc------ccchhhHHhhccCC
Confidence 113345569999999988999999999999999999999999999999999999985321 11345566666 48
Q ss_pred CceEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC-----ccCHHH
Q 014232 302 NGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN-----DLEKGE 376 (428)
Q Consensus 302 ~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~-----~~~~~~ 376 (428)
++++++|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+.. .++.++
T Consensus 325 ~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~ 404 (456)
T PLN02210 325 QGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEE 404 (456)
T ss_pred CeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHH
Confidence 888999999999999999999999999999999999999999999999999999999876799999852 589999
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 377 VEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 377 l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
|+++|+++|.++++++||+||++|++..++|+++||||+.++++|++.+.
T Consensus 405 l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 405 VERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 99999999988778899999999999999999999999999999999875
No 10
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=9.5e-67 Score=493.06 Aligned_cols=413 Identities=26% Similarity=0.422 Sum_probs=317.2
Q ss_pred CHHHHHHHHhC-CCeEEEEeCCCCCCCC------CC---CCCceEEEcCCCCCCCC-CCcCCHHHHHHHHHHhhchhHHH
Q 014232 1 MLQLGTILYSK-GFSITVVHTDFNSPNP------SN---HPKFSFQSIPEGLADDD-IYSGNIIAIIMHLNANCGAPFHK 69 (428)
Q Consensus 1 ~l~La~~L~~r-Gh~Vt~~~~~~~~~~~------~~---~~gi~f~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ 69 (428)
|++||+.|+++ |..|||++++.+.... .. ..+|+++.+|....++. ....+....+......+.+.+++
T Consensus 20 ~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 99 (470)
T PLN03015 20 ILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIPSVDVDNLVEPDATIFTKMVVKMRAMKPAVRD 99 (470)
T ss_pred HHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEECCCCccccCCCCCccHHHHHHHHHHhchHHHHH
Confidence 68999999987 9999999888554321 11 12599999985432221 11113333344444567777777
Q ss_pred HHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCc-eEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCC
Q 014232 70 CLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLR-SIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRL 148 (428)
Q Consensus 70 ~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP-~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 148 (428)
+++++. . +++|||+|.+++|+.++|+++||| .++|++++++.++.+++++............ ......+|++
T Consensus 100 ~l~~l~-----~-~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~~~~~-~~~~~~vPg~ 172 (470)
T PLN03015 100 AVKSMK-----R-KPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGEYVD-IKEPLKIPGC 172 (470)
T ss_pred HHHhcC-----C-CCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhcccccccCC-CCCeeeCCCC
Confidence 777653 2 679999999999999999999999 5888888887776666654322110000001 0111347888
Q ss_pred CCCCCCCCCCCcCCCChH-HHHHHHhhhccCCccEEEEcCchhhhHHHHHHHHhhC------CCCcceeccCCCCCCCCC
Q 014232 149 QPLRFKDLPFSQFGLPEN-FLQLIPKIYNVRTSKAVIWNTMNCIEQSSLSQLQQQC------NIPIFPVGPLHKFAPSSP 221 (428)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~------~~~v~~vGpl~~~~~~~~ 221 (428)
+.++..+++....+.... +...+...+...+++++++|||++||+..++.+++.+ .++++.|||+......
T Consensus 173 p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~~-- 250 (470)
T PLN03015 173 KPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNVH-- 250 (470)
T ss_pred CCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCccc--
Confidence 888888888543222222 2333322555788999999999999999999988752 2569999999853211
Q ss_pred CCCccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCC-------CCCccccCCchh
Q 014232 222 GSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSST-------SASSGIELLPEG 294 (428)
Q Consensus 222 ~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~-------~~~~~~~~~p~~ 294 (428)
...+.+|.+|||+++++|||||||||+..++.+++++++.+|+.++++|||+++.... +..+..+.+|+|
T Consensus 251 ---~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~ 327 (470)
T PLN03015 251 ---VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEG 327 (470)
T ss_pred ---ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChH
Confidence 1123359999999999999999999999999999999999999999999999974211 000111258999
Q ss_pred HHHhhCCCceEE-eecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC----
Q 014232 295 FEEAVGENGCVV-KWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE---- 369 (428)
Q Consensus 295 ~~~~~~~~~~v~-~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~---- 369 (428)
+.+++.++++++ +|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+.
T Consensus 328 f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 328 FLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred HHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 999999998765 999999999999999999999999999999999999999999999999999977789999995
Q ss_pred -CccCHHHHHHHHHHHhcC--chhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 014232 370 -NDLEKGEVEKAVKQLMVE--KEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFF 425 (428)
Q Consensus 370 -~~~~~~~l~~ai~~vl~~--~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 425 (428)
+.++.+++.++|+++|++ ++++++|+||+++++..++|+++||||+.++++|++.+
T Consensus 408 ~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~ 466 (470)
T PLN03015 408 EKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRC 466 (470)
T ss_pred CCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhc
Confidence 258999999999999963 56889999999999999999999999999999999876
No 11
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1e-66 Score=499.11 Aligned_cols=417 Identities=25% Similarity=0.377 Sum_probs=314.7
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCC----CCCCceEEEcC----CCCCCCCCCcCCHH-HHHHHHH---HhhchhHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPS----NHPKFSFQSIP----EGLADDDIYSGNII-AIIMHLN---ANCGAPFH 68 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~----~~~gi~f~~l~----~~~~~~~~~~~~~~-~~~~~~~---~~~~~~l~ 68 (428)
|++||+.|+++|+.|||++|+.+...+. ..++++++.+| +++|++.+...+.. +.+..+. ..+.+.+.
T Consensus 26 ~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~~~~i~~~~lp~P~~~~lPdG~~~~~~~~~~~~~~~~~a~~~~~~~~~ 105 (477)
T PLN02863 26 LLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLPFPSHPSIPSGVENVKDLPPSGFPLMIHALGELYAPLL 105 (477)
T ss_pred HHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcccCCCeeEEeCCCCCcCCCCCCCcChhhcchhhHHHHHHHHHHhHHHHH
Confidence 6899999999999999999998875432 12368887765 35666655433322 2222222 23333444
Q ss_pred HHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCC-CCCCCC
Q 014232 69 KCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNL-ADPVPR 147 (428)
Q Consensus 69 ~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~ 147 (428)
+.++++ . . +++|||+|.+++|+.++|+++|||++.|++++++.++.+.+++...+....+....... ...+|+
T Consensus 106 ~~l~~~---~--~-~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg 179 (477)
T PLN02863 106 SWFRSH---P--S-PPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQNEILSFSKIPN 179 (477)
T ss_pred HHHHhC---C--C-CCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccccccccccccccccCCCCC
Confidence 444432 1 2 67999999999999999999999999999999999888877542111100011000111 124677
Q ss_pred CCCCCCCCCCCCcCC--CChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhCC-CCcceeccCCCCCCCC---
Q 014232 148 LQPLRFKDLPFSQFG--LPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCN-IPIFPVGPLHKFAPSS--- 220 (428)
Q Consensus 148 ~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~-~~v~~vGpl~~~~~~~--- 220 (428)
++.++.++++..... ......+.+.+ ......++++++|||++||+.+++++++.++ ++++.|||+.......
T Consensus 180 ~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~~~ 259 (477)
T PLN02863 180 CPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGL 259 (477)
T ss_pred CCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCcccccccccc
Confidence 777888888854221 12223333433 4445677889999999999999999988765 5799999997533110
Q ss_pred ---CCCCccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHH
Q 014232 221 ---PGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEE 297 (428)
Q Consensus 221 ---~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~ 297 (428)
+.+....+++|.+|||.+++++||||||||+..++.+++++++.+|+.++++|||+++...... .....+|+++.+
T Consensus 260 ~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~-~~~~~lp~~~~~ 338 (477)
T PLN02863 260 MERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEE-SDYSNIPSGFED 338 (477)
T ss_pred cccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccc-cchhhCCHHHHH
Confidence 0111112346999999998899999999999999999999999999999999999998532111 012348999988
Q ss_pred hhCCCceE-EeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC----cc
Q 014232 298 AVGENGCV-VKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN----DL 372 (428)
Q Consensus 298 ~~~~~~~v-~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~----~~ 372 (428)
++.+.+++ .+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||++++++||+|+++.. ..
T Consensus 339 r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~ 418 (477)
T PLN02863 339 RVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVP 418 (477)
T ss_pred HhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCc
Confidence 88765554 59999999999999999999999999999999999999999999999999998776899999942 46
Q ss_pred CHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 373 EKGEVEKAVKQLMV-EKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 373 ~~~~l~~ai~~vl~-~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
+.+++.++|+++|. + ++||+||+++++..++|+.++||+..++++|++.+.+
T Consensus 419 ~~~~v~~~v~~~m~~~---~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~ 471 (477)
T PLN02863 419 DSDELARVFMESVSEN---QVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVE 471 (477)
T ss_pred CHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHH
Confidence 89999999999994 4 8999999999999999999999999999999999875
No 12
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9.1e-67 Score=501.64 Aligned_cols=410 Identities=30% Similarity=0.512 Sum_probs=321.3
Q ss_pred CHHHHHHHHhC--CCeEEEEeCCCCCCCCCC---CCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHH
Q 014232 1 MLQLGTILYSK--GFSITVVHTDFNSPNPSN---HPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMM 75 (428)
Q Consensus 1 ~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~---~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 75 (428)
|++||++|++| ||.|||++++.+...+.. .++++|+.+|+++|++.....+...++..+...+.+.++++++++.
T Consensus 27 ~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~~~gi~fv~lp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 106 (459)
T PLN02448 27 MMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDNIRFATIPNVIPSELVRAADFPGFLEAVMTKMEAPFEQLLDRLE 106 (459)
T ss_pred HHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCCCCCEEEEECCCCCCCccccccCHHHHHHHHHHHhHHHHHHHHHhcC
Confidence 68999999999 999999999987654433 2489999999877765443345555555555556666777776653
Q ss_pred HccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCC---CCCCCCCCCCCCCC
Q 014232 76 KQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDP---SNLADPVPRLQPLR 152 (428)
Q Consensus 76 ~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~ 152 (428)
. ++||||+|.++.|+..+|+++|||++.|+++++..++.+.+++.....+..+.... ......+|+++.++
T Consensus 107 --~----~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~ 180 (459)
T PLN02448 107 --P----PVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSESGEERVDYIPGLSSTR 180 (459)
T ss_pred --C----CcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCccccccCCccccCCCCCCCC
Confidence 2 68999999999999999999999999999999987777666543322222222110 11111367776777
Q ss_pred CCCCCCCcCCCChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCCCC--CCCC-Cc-cc
Q 014232 153 FKDLPFSQFGLPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFAPS--SPGS-LL-KE 227 (428)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~~~--~~~~-~~-~~ 227 (428)
..+++...........+.+.. +....+++.+++||+++||+.+++++++.++.+++.|||+...... .... .. +.
T Consensus 181 ~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~~~~~~~~~~~ 260 (459)
T PLN02448 181 LSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNSSSSNNEDN 260 (459)
T ss_pred hHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCCCccccccccc
Confidence 777775432222232333444 5556678899999999999999999988777789999999753211 0000 01 12
Q ss_pred cchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEe
Q 014232 228 DTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVK 307 (428)
Q Consensus 228 ~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~ 307 (428)
+.++.+||+.++++++|||||||+...+.+++++++.+|+.++++|||+++.. ..++.++.++|+++++
T Consensus 261 ~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-----------~~~~~~~~~~~~~v~~ 329 (459)
T PLN02448 261 EPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE-----------ASRLKEICGDMGLVVP 329 (459)
T ss_pred hhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc-----------hhhHhHhccCCEEEec
Confidence 23589999998889999999999988889999999999999999999987642 1234445557889999
Q ss_pred ecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC------CccCHHHHHHHH
Q 014232 308 WAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE------NDLEKGEVEKAV 381 (428)
Q Consensus 308 ~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~------~~~~~~~l~~ai 381 (428)
|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+. ..+++++|+++|
T Consensus 330 w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av 409 (459)
T PLN02448 330 WCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELV 409 (459)
T ss_pred cCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987679998884 147999999999
Q ss_pred HHHhcC--chhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 382 KQLMVE--KEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 382 ~~vl~~--~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
+++|++ +++++||+||+++++..++++.++|||..++++|++.+.+
T Consensus 410 ~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 410 KRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 999986 3578999999999999999999999999999999999864
No 13
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=5.1e-66 Score=496.02 Aligned_cols=415 Identities=27% Similarity=0.436 Sum_probs=319.7
Q ss_pred CHHHHHHHHhCC----CeEEEEeCCCCCC----CC--------CCCCCceEEEcCCCC-CCCCCCcCCHHHHHHHHHHhh
Q 014232 1 MLQLGTILYSKG----FSITVVHTDFNSP----NP--------SNHPKFSFQSIPEGL-ADDDIYSGNIIAIIMHLNANC 63 (428)
Q Consensus 1 ~l~La~~L~~rG----h~Vt~~~~~~~~~----~~--------~~~~gi~f~~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 63 (428)
|++||+.|+.|| +.|||++++.+.. .+ ....+|+|+.+|++. |++.+ +...++..+...+
T Consensus 20 ~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~~e---~~~~~~~~~~~~~ 96 (480)
T PLN00164 20 MLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVEPPTDAA---GVEEFISRYIQLH 96 (480)
T ss_pred HHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCCCCCccc---cHHHHHHHHHHhh
Confidence 689999999997 7999999886532 11 111259999999764 32222 2334444455566
Q ss_pred chhHHHHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCC
Q 014232 64 GAPFHKCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLAD 143 (428)
Q Consensus 64 ~~~l~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 143 (428)
.+.++++++.+ . + +++|||+|.++.|+.++|+++|||++.|++++++.++.+.+++......-.+... .....
T Consensus 97 ~~~l~~~L~~l---~--~-pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 169 (480)
T PLN00164 97 APHVRAAIAGL---S--C-PVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFEE-MEGAV 169 (480)
T ss_pred hHHHHHHHHhc---C--C-CceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhcccccCcccc-cCcce
Confidence 66677666655 1 2 5799999999999999999999999999999999888877654321110001111 00112
Q ss_pred CCCCCCCCCCCCCCCCcCCCChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhC------CCCcceeccCCCC
Q 014232 144 PVPRLQPLRFKDLPFSQFGLPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQC------NIPIFPVGPLHKF 216 (428)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~------~~~v~~vGpl~~~ 216 (428)
.+|+++.++..+++.......+...+.+.. .+...+++++++|||++||+..+++++... .++++.|||++..
T Consensus 170 ~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~ 249 (480)
T PLN00164 170 DVPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVISL 249 (480)
T ss_pred ecCCCCCCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCccc
Confidence 378888788888886432222222333333 555677899999999999999999997742 1469999999853
Q ss_pred CCCCCCCCccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCC------CccccC
Q 014232 217 APSSPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSA------SSGIEL 290 (428)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~------~~~~~~ 290 (428)
... ....+.+.+|.+|||+++++|||||||||+..++.+++++++.+|+.++++|||+++.....+ .+..+.
T Consensus 250 ~~~--~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~ 327 (480)
T PLN00164 250 AFT--PPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDEL 327 (480)
T ss_pred ccc--CCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhh
Confidence 211 011234456999999999999999999999889999999999999999999999998532100 011123
Q ss_pred CchhHHHhhCCCceEE-eecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC
Q 014232 291 LPEGFEEAVGENGCVV-KWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE 369 (428)
Q Consensus 291 ~p~~~~~~~~~~~~v~-~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~ 369 (428)
+|+++.+++.++++++ +|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+.
T Consensus 328 lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~ 407 (480)
T PLN00164 328 LPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMK 407 (480)
T ss_pred CChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEec
Confidence 8899999998888877 999999999999999999999999999999999999999999999999998876689999984
Q ss_pred C------ccCHHHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 370 N------DLEKGEVEKAVKQLMVEK--EGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 370 ~------~~~~~~l~~ai~~vl~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
. .++.++|.++|+++|.++ +++++|+||+++++.++++++++||+..++++|++.+.+
T Consensus 408 ~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~ 473 (480)
T PLN00164 408 VDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRH 473 (480)
T ss_pred cccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 1 379999999999999864 378999999999999999999999999999999998863
No 14
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=2e-66 Score=495.84 Aligned_cols=417 Identities=28% Similarity=0.476 Sum_probs=310.3
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCC------C--CCceEEEcC-----CCCCCCCCCcCCHH--HHHHHHH---Hh
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSN------H--PKFSFQSIP-----EGLADDDIYSGNII--AIIMHLN---AN 62 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~------~--~gi~f~~l~-----~~~~~~~~~~~~~~--~~~~~~~---~~ 62 (428)
|++||+.|++||+.|||++|+.+...... . ..|+|+.+| +++|++.+...+.. .+...+. ..
T Consensus 25 ~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~~~~~~~~~~~~~~~~~~~~ 104 (491)
T PLN02534 25 MIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAVDK 104 (491)
T ss_pred HHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCccccccCCcHHHHHHHHHHHHH
Confidence 68999999999999999999987643221 1 138999998 68887654433221 2222222 23
Q ss_pred hchhHHHHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCC
Q 014232 63 CGAPFHKCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLA 142 (428)
Q Consensus 63 ~~~~l~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 142 (428)
+.+.+.+++.+. . . +++|||+|.++.|+.++|+++|||+++|++++++..+.+..+....+ ..+... ....
T Consensus 105 l~~~l~~lL~~~---~--~-pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~--~~~~~~-~~~~ 175 (491)
T PLN02534 105 LQQPLERFLEQA---K--P-PPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNA--HLSVSS-DSEP 175 (491)
T ss_pred hHHHHHHHHHhc---C--C-CCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcc--cccCCC-CCce
Confidence 344444444432 1 2 68999999999999999999999999999999887776544321111 111111 1112
Q ss_pred CCCCCCCC---CCCCCCCCCcCCCChHHHHHHHhhh-ccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCCC
Q 014232 143 DPVPRLQP---LRFKDLPFSQFGLPENFLQLIPKIY-NVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFAP 218 (428)
Q Consensus 143 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~~ 218 (428)
..+|+++. ++..+++...... .....+...+. ...+++.+++|||++||+.++++++..++++++.|||+.....
T Consensus 176 ~~iPg~p~~~~l~~~dlp~~~~~~-~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~ 254 (491)
T PLN02534 176 FVVPGMPQSIEITRAQLPGAFVSL-PDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNK 254 (491)
T ss_pred eecCCCCccccccHHHCChhhcCc-ccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECccccccc
Confidence 34677653 6666776432111 11222222222 2345779999999999999999998877778999999975321
Q ss_pred CC-----CCCCcc-ccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCc
Q 014232 219 SS-----PGSLLK-EDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLP 292 (428)
Q Consensus 219 ~~-----~~~~~~-~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p 292 (428)
.. ...... .+.+|.+|||++++++||||||||+....++++.+++.+|+.++++|||+++............+|
T Consensus 255 ~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p 334 (491)
T PLN02534 255 RNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVK 334 (491)
T ss_pred ccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCc
Confidence 10 000011 234599999999989999999999999999999999999999999999999843111000001368
Q ss_pred hhHHHhhCCCce-EEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC--
Q 014232 293 EGFEEAVGENGC-VVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE-- 369 (428)
Q Consensus 293 ~~~~~~~~~~~~-v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~-- 369 (428)
++|.+++.++++ +.+|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.||+|+++.
T Consensus 335 ~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~ 414 (491)
T PLN02534 335 ENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVE 414 (491)
T ss_pred hhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccc
Confidence 999888765555 45999999999999999999999999999999999999999999999999999998899999873
Q ss_pred -----------C-ccCHHHHHHHHHHHhc--CchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 370 -----------N-DLEKGEVEKAVKQLMV--EKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 370 -----------~-~~~~~~l~~ai~~vl~--~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
. .++.++|.++|+++|. +++++++|+||++|++..++|+.++|||+.++++|++.+.+
T Consensus 415 ~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~ 486 (491)
T PLN02534 415 VPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLK 486 (491)
T ss_pred ccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 1 2789999999999997 45688999999999999999999999999999999999863
No 15
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1.8e-66 Score=491.78 Aligned_cols=406 Identities=27% Similarity=0.492 Sum_probs=308.5
Q ss_pred CHHHHHHHHhCC--CeEEE--EeCCCCCCC--------CCCCCCceEEEcCCCCCCCCC--CcCCHHHHHHHHHHhhchh
Q 014232 1 MLQLGTILYSKG--FSITV--VHTDFNSPN--------PSNHPKFSFQSIPEGLADDDI--YSGNIIAIIMHLNANCGAP 66 (428)
Q Consensus 1 ~l~La~~L~~rG--h~Vt~--~~~~~~~~~--------~~~~~gi~f~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 66 (428)
|++||++|++|| +.||+ ++++.+... ....++|+|+.+|++.+.+.. ...+....+......+.+.
T Consensus 20 ~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (451)
T PLN03004 20 MVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVTPYSSSSTSRHHHESLLLEILCFSNPS 99 (451)
T ss_pred HHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCCCCCCccccccCHHHHHHHHHHhhhHH
Confidence 689999999998 45554 555543221 112247999999977642221 1122333444445567777
Q ss_pred HHHHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCC-CCCCC
Q 014232 67 FHKCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSN-LADPV 145 (428)
Q Consensus 67 l~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~ 145 (428)
+.+.+.++... + +++|||+|.++.|+..+|+++|||+++|++++++.++.+.+++..... .+...... ....+
T Consensus 100 ~~~~l~~l~~~---~-pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~--~~~~~~~~~~~v~i 173 (451)
T PLN03004 100 VHRTLFSLSRN---F-NVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDET--TPGKNLKDIPTVHI 173 (451)
T ss_pred HHHHHHhcCCC---C-CceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhcccc--ccccccccCCeecC
Confidence 77888776322 2 569999999999999999999999999999999988888775532111 11100011 11347
Q ss_pred CCCCCCCCCCCCCCcCCCChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhCC-CCcceeccCCCCCCCCCCC
Q 014232 146 PRLQPLRFKDLPFSQFGLPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCN-IPIFPVGPLHKFAPSSPGS 223 (428)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~-~~v~~vGpl~~~~~~~~~~ 223 (428)
|+++.++.++++...........+.+.+ .....+++.+++|||++||+.+++++++.+. ++++.|||+....... ..
T Consensus 174 Pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~-~~ 252 (451)
T PLN03004 174 PGVPPMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIE-DR 252 (451)
T ss_pred CCCCCCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCcccc-cc
Confidence 8888888888886543333333344444 5556778899999999999999999987543 5799999997532210 01
Q ss_pred CccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCC--cccc-CCchhHHHhhC
Q 014232 224 LLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSAS--SGIE-LLPEGFEEAVG 300 (428)
Q Consensus 224 ~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~--~~~~-~~p~~~~~~~~ 300 (428)
....+.+|.+|||+++++|||||||||+..++.+++++++.+|+.++++|||+++....... .... .+|++|.+++.
T Consensus 253 ~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~ 332 (451)
T PLN03004 253 NDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTE 332 (451)
T ss_pred ccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhcc
Confidence 11223459999999989999999999999899999999999999999999999985311000 0112 28999999998
Q ss_pred CCce-EEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC----ccCHH
Q 014232 301 ENGC-VVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN----DLEKG 375 (428)
Q Consensus 301 ~~~~-v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~----~~~~~ 375 (428)
++++ +.+|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++++|+|+.++. .++.+
T Consensus 333 ~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e 412 (451)
T PLN03004 333 DKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSST 412 (451)
T ss_pred CCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHH
Confidence 7665 559999999999999999999999999999999999999999999999999999866899999963 47999
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHH
Q 014232 376 EVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSS 416 (428)
Q Consensus 376 ~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 416 (428)
+|.++|+++|++ ++||+||+++++..+.|+++||||++
T Consensus 413 ~l~~av~~vm~~---~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 413 EVEKRVQEIIGE---CPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred HHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999998 89999999999999999999999864
No 16
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=7.5e-66 Score=485.57 Aligned_cols=397 Identities=23% Similarity=0.364 Sum_probs=303.7
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCC---CC-C--ceEEEcC--CCCCCCCCCcCCHH-HHHHHHH---HhhchhHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSN---HP-K--FSFQSIP--EGLADDDIYSGNII-AIIMHLN---ANCGAPFH 68 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~---~~-g--i~f~~l~--~~~~~~~~~~~~~~-~~~~~~~---~~~~~~l~ 68 (428)
|++||+.|++||+.|||++|+.+...... .+ + +.++++| +++|++.+...+.. .....+. ..+.+.++
T Consensus 22 ~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~~~glp~g~e~~~~~~~~~~~~~~~a~~~~~~~~~ 101 (453)
T PLN02764 22 FLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPHVDGLPVGTETVSEIPVTSADLLMSAMDLTRDQVE 101 (453)
T ss_pred HHHHHHHHHhCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCCcCCCCCcccccccCChhHHHHHHHHHHHhHHHHH
Confidence 68999999999999999999987643321 11 2 7777787 77877654332222 2112222 23334444
Q ss_pred HHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCC
Q 014232 69 KCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRL 148 (428)
Q Consensus 69 ~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 148 (428)
+++++ . ++||||+|. ..|+.++|+++|||++.|++++++.++.+.. + ....+ ...+++
T Consensus 102 ~~l~~----~----~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~----~~~~~--------~~~pgl 159 (453)
T PLN02764 102 VVVRA----V----EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-P----GGELG--------VPPPGY 159 (453)
T ss_pred HHHHh----C----CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-c----cccCC--------CCCCCC
Confidence 44443 2 679999995 8999999999999999999999987776642 1 11110 112444
Q ss_pred C----CCCCCCCCCCcC----CCChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCCCC
Q 014232 149 Q----PLRFKDLPFSQF----GLPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFAPS 219 (428)
Q Consensus 149 ~----~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~~~ 219 (428)
+ .++.++++.... ...+.....+.+ .....+++.+++|||++||+.+++++++..+++++.|||+......
T Consensus 160 p~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~ 239 (453)
T PLN02764 160 PSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDK 239 (453)
T ss_pred CCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccc
Confidence 3 244444443210 111123333333 3556778899999999999999999987555679999999764311
Q ss_pred CCCCCccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhh
Q 014232 220 SPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAV 299 (428)
Q Consensus 220 ~~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~ 299 (428)
.. ..+.+|.+|||+++++|||||||||+..++.+++.+++.+|+..+.+|+|+++...... +..+.+|++|.+++
T Consensus 240 --~~--~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~-~~~~~lp~~f~~r~ 314 (453)
T PLN02764 240 --TR--ELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSS-TIQEALPEGFEERV 314 (453)
T ss_pred --cc--cchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCc-chhhhCCcchHhhh
Confidence 01 12345999999999999999999999999999999999999999999999998532111 11235999999999
Q ss_pred CCCceEE-eecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC----ccCH
Q 014232 300 GENGCVV-KWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN----DLEK 374 (428)
Q Consensus 300 ~~~~~v~-~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~----~~~~ 374 (428)
.++++++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+.. .++.
T Consensus 315 ~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~ 394 (453)
T PLN02764 315 KGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSK 394 (453)
T ss_pred ccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCH
Confidence 8888877 9999999999999999999999999999999999999999999999999999766899999742 4899
Q ss_pred HHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhcC
Q 014232 375 GEVEKAVKQLMVEK--EGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNLF 428 (428)
Q Consensus 375 ~~l~~ai~~vl~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 428 (428)
++|+++|+++|+++ +++++|++|+++++.++ ++||+..++++|++.+.++
T Consensus 395 e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~----~~GSS~~~l~~lv~~~~~~ 446 (453)
T PLN02764 395 ESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA----SPGLLTGYVDNFIESLQDL 446 (453)
T ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHh
Confidence 99999999999873 47889999999999997 7899999999999998763
No 17
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9.6e-66 Score=496.22 Aligned_cols=415 Identities=25% Similarity=0.444 Sum_probs=314.3
Q ss_pred CHHHHHHHHhCC--CeEEEEeCCCCCCC-------CC---C--CCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchh
Q 014232 1 MLQLGTILYSKG--FSITVVHTDFNSPN-------PS---N--HPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAP 66 (428)
Q Consensus 1 ~l~La~~L~~rG--h~Vt~~~~~~~~~~-------~~---~--~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (428)
|++||+.|+.|| ..|||++|+.+... .. . .++|+|+.+|++.++... . . .+..+...+...
T Consensus 19 ~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~---~-~-~~~~~~~~~~~~ 93 (481)
T PLN02554 19 TVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTTE---D-P-TFQSYIDNQKPK 93 (481)
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCccc---c-h-HHHHHHHHHHHH
Confidence 689999999998 88999999977532 11 1 236999999976642211 1 1 222233455556
Q ss_pred HHHHHHHHHHcc---CCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCC--CCCC
Q 014232 67 FHKCLVQMMKQQ---MPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQD--PSNL 141 (428)
Q Consensus 67 l~~~l~~l~~~~---~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~ 141 (428)
+++.++++.... ..+ +++|||+|.++.|+.++|+++|||++.|++++++.++.+.+.+......-.+... ....
T Consensus 94 ~~~~l~~l~~~~~~~~~~-pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (481)
T PLN02554 94 VRDAVAKLVDDSSTPSSP-RLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEV 172 (481)
T ss_pred HHHHHHHHHhhhccCCCC-CeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccccCccccCCCCc
Confidence 666666664320 011 3589999999999999999999999999999999988887765432211111111 0111
Q ss_pred CCCCCCCC-CCCCCCCCCCcCCCChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhh--CCCCcceeccCCC-C
Q 014232 142 ADPVPRLQ-PLRFKDLPFSQFGLPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQ--CNIPIFPVGPLHK-F 216 (428)
Q Consensus 142 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~--~~~~v~~vGpl~~-~ 216 (428)
...+|+++ +++..+++..... ....+.+.+ .....+++++++||+.+||+.++..+... ..++++.|||+.. .
T Consensus 173 ~v~iPgl~~pl~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~ 250 (481)
T PLN02554 173 ELDVPSLTRPYPVKCLPSVLLS--KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLE 250 (481)
T ss_pred eeECCCCCCCCCHHHCCCcccC--HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCcccc
Confidence 12377773 6777787754322 223334444 55677889999999999999988888753 2257999999943 2
Q ss_pred CCCCCCCCccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCC------CC--Cccc
Q 014232 217 APSSPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSST------SA--SSGI 288 (428)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~------~~--~~~~ 288 (428)
.+. .....+.+.+|.+|||++++++||||||||+..++.+++++++.+|+.++++|||+++.... .+ .+..
T Consensus 251 ~~~-~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~ 329 (481)
T PLN02554 251 NSG-DDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLE 329 (481)
T ss_pred ccc-cccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchh
Confidence 221 00001223459999999988899999999998899999999999999999999999975310 00 0001
Q ss_pred cCCchhHHHhhCCCceEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEc
Q 014232 289 ELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQL 368 (428)
Q Consensus 289 ~~~p~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l 368 (428)
+.+|++|.++..+|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+
T Consensus 330 ~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l 409 (481)
T PLN02554 330 EILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEI 409 (481)
T ss_pred hhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEe
Confidence 22699999999999999999999999999999999999999999999999999999999999999996544558999998
Q ss_pred C------------CccCHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 369 E------------NDLEKGEVEKAVKQLMV-EKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 369 ~------------~~~~~~~l~~ai~~vl~-~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
+ ..+++++|.++|+++|+ + ++||+||+++++.+++|+.++|++..++++|++.+.+
T Consensus 410 ~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~---~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~ 478 (481)
T PLN02554 410 RKYWRGDLLAGEMETVTAEEIERGIRCLMEQD---SDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTK 478 (481)
T ss_pred eccccccccccccCeEcHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHh
Confidence 5 25899999999999997 6 7999999999999999999999999999999999864
No 18
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.4e-65 Score=486.64 Aligned_cols=398 Identities=22% Similarity=0.347 Sum_probs=299.0
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCC----CCceEEEc--C--CCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNH----PKFSFQSI--P--EGLADDDIYSGNIIAIIMHLNANCGAPFHKCLV 72 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~----~gi~f~~l--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 72 (428)
|++||+.|++|||+|||++++.+...+.+. .++.+..+ | +++|++.+...+....+..+.......+.+.++
T Consensus 21 ~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~~~~i~~~~l~~p~~dgLp~g~~~~~~l~~~l~~~~~~~~~~~~~~l~ 100 (442)
T PLN02208 21 FLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIPPVNGLPAGAETTSDIPISMDNLLSEALDLTRDQVE 100 (442)
T ss_pred HHHHHHHHHhCCCEEEEEeccchhhhhhcccCCCCceEEEEeCCCCccCCCCCcccccchhHHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999998776543321 24666655 3 567766543333332222222222223444455
Q ss_pred HHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCCC--
Q 014232 73 QMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQP-- 150 (428)
Q Consensus 73 ~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-- 150 (428)
++++.. ++||||+| ++.|+..+|+++|||++.|++++++.++ +.+.+. .... ..+++++.
T Consensus 101 ~~L~~~----~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~----~~~~--------~~~pglp~~~ 162 (442)
T PLN02208 101 AAVRAL----RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG----GKLG--------VPPPGYPSSK 162 (442)
T ss_pred HHHhhC----CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc----cccC--------CCCCCCCCcc
Confidence 554443 78999999 5799999999999999999999987654 333210 0000 11344443
Q ss_pred --CCCCCCCCCcCCCChHHHHHHH-h-hhccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCCCCCCCCCcc
Q 014232 151 --LRFKDLPFSQFGLPENFLQLIP-K-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFAPSSPGSLLK 226 (428)
Q Consensus 151 --~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~ 226 (428)
++..+++.. .......+.+. . .+...+++.+++|||.+||+.+++++++.++++++.|||++..... ...+
T Consensus 163 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~--~~~~- 237 (442)
T PLN02208 163 VLFRENDAHAL--ATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDT--SKPL- 237 (442)
T ss_pred cccCHHHcCcc--cccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCC--CCCC-
Confidence 344455532 11112222222 2 2456678999999999999999999988776789999999865321 1112
Q ss_pred ccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEE
Q 014232 227 EDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVV 306 (428)
Q Consensus 227 ~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~ 306 (428)
+.+|.+|||++++++||||||||+..++.+++.+++.+++..+.+++|+++.+.... +..+.+|++|.+++.++++++
T Consensus 238 -~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~-~~~~~lp~~f~~r~~~~g~~v 315 (442)
T PLN02208 238 -EEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSS-TVQEGLPEGFEERVKGRGVVW 315 (442)
T ss_pred -HHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccc-chhhhCCHHHHHHHhcCCcEe
Confidence 345999999998899999999999999999999999999888999999998542111 112348999999987666655
Q ss_pred -eecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC-c---cCHHHHHHHH
Q 014232 307 -KWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN-D---LEKGEVEKAV 381 (428)
Q Consensus 307 -~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~-~---~~~~~l~~ai 381 (428)
+|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+++ . ++.++|.++|
T Consensus 316 ~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai 395 (442)
T PLN02208 316 GGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAI 395 (442)
T ss_pred eccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998776899999974 3 8999999999
Q ss_pred HHHhcCc--hhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 382 KQLMVEK--EGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 382 ~~vl~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
+++|+++ +++++|+||+++++.+. ++|||..++++|++.+.+
T Consensus 396 ~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~ 439 (442)
T PLN02208 396 KSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQE 439 (442)
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHH
Confidence 9999874 37899999999999985 689999999999999875
No 19
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=3.2e-65 Score=493.31 Aligned_cols=417 Identities=26% Similarity=0.440 Sum_probs=309.6
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCC--------CC----CceEEEcC---CCCCCCCCCcC--------CHHHHHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSN--------HP----KFSFQSIP---EGLADDDIYSG--------NIIAIIM 57 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~--------~~----gi~f~~l~---~~~~~~~~~~~--------~~~~~~~ 57 (428)
|++||++|++|||+|||++++.+...+.+ .+ .+.+.++| +++|++.+... ....++.
T Consensus 22 ~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e~~~~~~~~~~~~~~~~~~ 101 (482)
T PLN03007 22 TLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFL 101 (482)
T ss_pred HHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCcccccccccccccchHHHHH
Confidence 68999999999999999999987643221 11 34455666 46776543321 1223333
Q ss_pred HHHHhhchhHHHHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCC
Q 014232 58 HLNANCGAPFHKCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQD 137 (428)
Q Consensus 58 ~~~~~~~~~l~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 137 (428)
.+. .....+.+.++++.+.. ++||||+|.++.|+..+|+++|||+++|++++++.++.+..+....+....+...
T Consensus 102 ~~~-~~~~~l~~~l~~~l~~~----~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~ 176 (482)
T PLN03007 102 KFL-FSTKYFKDQLEKLLETT----RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSS 176 (482)
T ss_pred HHH-HHHHHHHHHHHHHHhcC----CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccccccCCCC
Confidence 333 33344556666666554 7899999999999999999999999999999988777665433211111111100
Q ss_pred CCCCCCCCCCCCC---CCCCCCCCCcCCCChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccC
Q 014232 138 PSNLADPVPRLQP---LRFKDLPFSQFGLPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPL 213 (428)
Q Consensus 138 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl 213 (428)
. ...+++++. ++..+++.. .......+.+.. .+...+++.+++||+++||++.++++++..+.++++|||+
T Consensus 177 -~--~~~~pg~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl 251 (482)
T PLN03007 177 -E--PFVIPDLPGDIVITEEQINDA--DEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPL 251 (482)
T ss_pred -c--eeeCCCCCCccccCHHhcCCC--CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEccc
Confidence 0 112455542 233333321 222223444444 4556788999999999999998999887666679999998
Q ss_pred CCCCCCC------CCCCccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcc
Q 014232 214 HKFAPSS------PGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSG 287 (428)
Q Consensus 214 ~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~ 287 (428)
....... +.+....+.+|.+|||.+++++||||||||+...+.+++.+++.+|+.++++|||+++...... +.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~-~~ 330 (482)
T PLN03007 252 SLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQG-EK 330 (482)
T ss_pred cccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCccc-ch
Confidence 6532210 0011112345999999998899999999999988899999999999999999999998642110 11
Q ss_pred ccCCchhHHHhhCCCc-eEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEE
Q 014232 288 IELLPEGFEEAVGENG-CVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGL 366 (428)
Q Consensus 288 ~~~~p~~~~~~~~~~~-~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~ 366 (428)
.+.+|+++.+++.+++ ++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+++|+
T Consensus 331 ~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~ 410 (482)
T PLN03007 331 EEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGV 410 (482)
T ss_pred hhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhccee
Confidence 1348999988876544 556999999999999999999999999999999999999999999999999999876556665
Q ss_pred Ec--------CC-ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhcC
Q 014232 367 QL--------EN-DLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNLF 428 (428)
Q Consensus 367 ~l--------~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 428 (428)
.+ +. .++.++|.++|+++|.++++++||+||+++++.+++|+.++|||..++++|++.+.++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 411 SVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred EeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 54 22 5899999999999999877789999999999999999999999999999999998864
No 20
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=8.1e-65 Score=482.04 Aligned_cols=398 Identities=23% Similarity=0.323 Sum_probs=297.1
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCceEEEcC----CCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSN----HPKFSFQSIP----EGLADDDIYSGNIIAIIMHLNANCGAPFHKCLV 72 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~----~~gi~f~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 72 (428)
|++||+.|++||+.|||++++.+...+.. .+++.|+.++ +++|++.+...+...............+.+.++
T Consensus 21 mL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~g~e~~~~l~~~~~~~~~~a~~~l~~~l~ 100 (446)
T PLN00414 21 YLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPFGAETASDLPNSTKKPIFDAMDLLRDQIE 100 (446)
T ss_pred HHHHHHHHHhCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCCcccccccchhhHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999977654421 1258885554 677776543333322111111222223445555
Q ss_pred HHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCCC--
Q 014232 73 QMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQP-- 150 (428)
Q Consensus 73 ~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-- 150 (428)
++++.. ++||||+|. +.|+.++|+++|||++.|++++++.++.+.+ +. .... . .+++++.
T Consensus 101 ~~L~~~----~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~-~~-~~~~-~----------~~pg~p~~~ 162 (446)
T PLN00414 101 AKVRAL----KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLA-PR-AELG-F----------PPPDYPLSK 162 (446)
T ss_pred HHHhcC----CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhC-cH-hhcC-C----------CCCCCCCCc
Confidence 555443 689999995 8999999999999999999999988776654 11 1000 0 1123321
Q ss_pred --CCCCCCC--CCcCCCChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCCCCCCCCCc
Q 014232 151 --LRFKDLP--FSQFGLPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFAPSSPGSLL 225 (428)
Q Consensus 151 --~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~~~~~~~~~ 225 (428)
++..+.. ... .. ....+.+ .+...+++.+++|||.+||+.++++++..++++++.|||+...... ....
T Consensus 163 ~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~--~~~~ 236 (446)
T PLN00414 163 VALRGHDANVCSLF-AN---SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQN--KSGK 236 (446)
T ss_pred CcCchhhcccchhh-cc---cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCccc--ccCc
Confidence 1111111 111 00 1123333 4556778999999999999999999988666689999999753321 0111
Q ss_pred cccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceE
Q 014232 226 KEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCV 305 (428)
Q Consensus 226 ~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v 305 (428)
..+..|.+|||.++++|||||||||....+.+++.+++.+|+.++++|+|+++.....+ +..+.+|++|.+++.+++++
T Consensus 237 ~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~-~~~~~lp~~f~~r~~~~g~v 315 (446)
T PLN00414 237 PLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSS-TVQEALPEGFEERVKGRGIV 315 (446)
T ss_pred ccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcc-cchhhCChhHHHHhcCCCeE
Confidence 12345999999999999999999999999999999999999999999999998632111 11235899999999999998
Q ss_pred E-eecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC----ccCHHHHHHH
Q 014232 306 V-KWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN----DLEKGEVEKA 380 (428)
Q Consensus 306 ~-~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~----~~~~~~l~~a 380 (428)
+ +|+||.+||+|+++++||||||||||+||+++|||||++|+++||+.||+++++++|+|+.+.+ .++.++|+++
T Consensus 316 v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~ 395 (446)
T PLN00414 316 WEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDT 395 (446)
T ss_pred EeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHH
Confidence 7 9999999999999999999999999999999999999999999999999999766899999953 4899999999
Q ss_pred HHHHhcCc--hhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 381 VKQLMVEK--EGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 381 i~~vl~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
|+++|.++ ++++||++|+++++.+. +.|++...+++|++.+.+
T Consensus 396 v~~~m~~~~e~g~~~r~~a~~~~~~~~----~~gg~ss~l~~~v~~~~~ 440 (446)
T PLN00414 396 VKSVMDKDSEIGNLVKRNHKKLKETLV----SPGLLSGYADKFVEALEN 440 (446)
T ss_pred HHHHhcCChhhHHHHHHHHHHHHHHHH----cCCCcHHHHHHHHHHHHH
Confidence 99999763 37889999999999975 344433558999998864
No 21
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=4.8e-64 Score=483.66 Aligned_cols=422 Identities=23% Similarity=0.365 Sum_probs=312.1
Q ss_pred CHHHHHHHHhCC---CeEEEEeCCCCCC-----CC----CCCCCceEEEcCCCC-CCCCCC-cCCHHHHHHHHHHhhchh
Q 014232 1 MLQLGTILYSKG---FSITVVHTDFNSP-----NP----SNHPKFSFQSIPEGL-ADDDIY-SGNIIAIIMHLNANCGAP 66 (428)
Q Consensus 1 ~l~La~~L~~rG---h~Vt~~~~~~~~~-----~~----~~~~gi~f~~l~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 66 (428)
|++||+.|+.|| +.||+++++.+.. .. ...++|+|+.+|++. +++.+. .......+..+...+.+.
T Consensus 20 ~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 99 (475)
T PLN02167 20 TIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQDPPPMELFVKASEAYILEFVKKMVPL 99 (475)
T ss_pred HHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCCCCccccccccchHHHHHHHHHHHHHH
Confidence 689999999999 3577777553321 01 112369999999654 222111 112223344455566667
Q ss_pred HHHHHHHHHHcc---CCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCC-CCC
Q 014232 67 FHKCLVQMMKQQ---MPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPS-NLA 142 (428)
Q Consensus 67 l~~~l~~l~~~~---~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~ 142 (428)
+++.++++.... ++. +++|||+|.+++|+.++|+++|||+++|++++++.++.+.+++.............. ...
T Consensus 100 l~~~l~~l~~~~~~~~~~-pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (475)
T PLN02167 100 VRDALSTLVSSRDESDSV-RVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKTASEFDLSSGEEE 178 (475)
T ss_pred HHHHHHHHHhhccccCCC-CeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhccccccccccCCCCCe
Confidence 777777765321 011 359999999999999999999999999999999888877765432111000000000 011
Q ss_pred CCCCCC-CCCCCCCCCCCcCCCChHHHHHHHh-hhccCCccEEEEcCchhhhHHHHHHHHhhCC--CCcceeccCCCCCC
Q 014232 143 DPVPRL-QPLRFKDLPFSQFGLPENFLQLIPK-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCN--IPIFPVGPLHKFAP 218 (428)
Q Consensus 143 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~--~~v~~vGpl~~~~~ 218 (428)
..+|++ +.++..+++....... ..+.+.+ .+...+++.+++|||++||+.++++++.... +++++|||++....
T Consensus 179 ~~iPgl~~~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~ 256 (475)
T PLN02167 179 LPIPGFVNSVPTKVLPPGLFMKE--SYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKD 256 (475)
T ss_pred eECCCCCCCCChhhCchhhhCcc--hHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEecccccccc
Confidence 236777 3577777774322211 1222333 5556778999999999999999999876411 46999999986432
Q ss_pred CCCCCC-ccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHH
Q 014232 219 SSPGSL-LKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEE 297 (428)
Q Consensus 219 ~~~~~~-~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~ 297 (428)
...... ...+.+|.+|||.+++++||||||||+..++.+++.+++.+|+.++++|||+++.......+....+|++|.+
T Consensus 257 ~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~e 336 (475)
T PLN02167 257 RTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMD 336 (475)
T ss_pred ccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHH
Confidence 100011 1122469999999988999999999998899999999999999999999999985321100112348999999
Q ss_pred hhCCCceEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC-------
Q 014232 298 AVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN------- 370 (428)
Q Consensus 298 ~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~------- 370 (428)
++.+++++++|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++.+.+|+|+.+..
T Consensus 337 r~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~ 416 (475)
T PLN02167 337 RVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYG 416 (475)
T ss_pred HhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999875555899998842
Q ss_pred -ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 371 -DLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 371 -~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
.+++++|.++|+++|.++ ++||+||+++++.+++++.++||+..++++|++.+.+
T Consensus 417 ~~~~~~~l~~av~~~m~~~--~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~ 472 (475)
T PLN02167 417 EIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLG 472 (475)
T ss_pred CcccHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 479999999999999763 4899999999999999999999999999999998864
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=3.1e-54 Score=417.24 Aligned_cols=373 Identities=17% Similarity=0.161 Sum_probs=263.6
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCC-CCCCCCCCceEEEcCCCCCC---CCCCc------C---CH----HHHHHHHHHhh
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNS-PNPSNHPKFSFQSIPEGLAD---DDIYS------G---NI----IAIIMHLNANC 63 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~-~~~~~~~gi~f~~l~~~~~~---~~~~~------~---~~----~~~~~~~~~~~ 63 (428)
|-.|+++|++|||+||++++.... .......+++.+.++...+. ..... . +. ......+...|
T Consensus 38 ~~~l~~~La~rGH~VTvi~p~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (507)
T PHA03392 38 FKVYVEALAERGHNVTVIKPTLRVYYASHLCGNITEIDASLSVEYFKKLVKSSAVFRKRGVVADSSTVTADNYMGLVRMI 117 (507)
T ss_pred HHHHHHHHHHcCCeEEEEecccccccccCCCCCEEEEEcCCChHHHHHHHhhhhHHHhhhhhhhHHHHHHHHHHHHHHHH
Confidence 357999999999999999776321 11112347777766511100 00000 0 00 01112233456
Q ss_pred chhHH-HHHHHHHH--ccCCCCCceEEEEcCchhhHHHHHHHc-CCceEEEecccHHHHHHHHhHh-hhhhcCCCCC---
Q 014232 64 GAPFH-KCLVQMMK--QQMPADEIVCIIYDELMYFAESAANQL-KLRSIILRTNSAATQISRIALL-QLKEDGSIPL--- 135 (428)
Q Consensus 64 ~~~l~-~~l~~l~~--~~~~~~~~D~vI~D~~~~~~~~~A~~l-giP~v~~~~~~~~~~~~~~~~~-~~~~~~~~p~--- 135 (428)
+..+. ..+.++++ +. +||+||+|.+..|+..+|+.+ ++|.|.++++....... ...+ .|.++.|+|.
T Consensus 118 ~~~l~~~~~~~~L~~~~~----kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~-~~~gg~p~~~syvP~~~~ 192 (507)
T PHA03392 118 SDQFDLPNVKNLIANKNN----KFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENF-ETMGAVSRHPVYYPNLWR 192 (507)
T ss_pred HHHHCCHHHHHHHhcCCC----ceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHH-HhhccCCCCCeeeCCccc
Confidence 66664 34445444 33 799999999889999999999 99988887765543322 2234 6677777775
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCC-CC-cCCCChHHHHHHHh-----hhccCCccEEEEcCchhhhHHHHHHHHhhCCCC
Q 014232 136 --QDPSNLADPVPRLQPLRFKDLP-FS-QFGLPENFLQLIPK-----IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIP 206 (428)
Q Consensus 136 --~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~-----~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~ 206 (428)
++.+++++|+.|+......... .. .....+...+.++. .+..++.+++|+|+.+.+|.+ +.++++
T Consensus 193 ~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~------rp~~p~ 266 (507)
T PHA03392 193 SKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNN------RPVPPS 266 (507)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccCC------CCCCCC
Confidence 2335666666664211000000 00 00111122333221 244567899999999999855 346778
Q ss_pred cceeccCCCCCCCCCCCCccccchhhhhcccCCCCcEEEEEeccccc---CCHHHHHHHHHHHHhCCCCeEEEEcCCCCC
Q 014232 207 IFPVGPLHKFAPSSPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVS---MDKKELKEMAWGLYNSKQPFLWVLRPSSTS 283 (428)
Q Consensus 207 v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~---~~~~~~~~~~~al~~~~~~~iw~~~~~~~~ 283 (428)
+++|||++.+... ..+++ +++.+|++.+ ++++|||||||+.. ++.+.++.+++|+++.+.+|||++++....
T Consensus 267 v~~vGgi~~~~~~--~~~l~--~~l~~fl~~~-~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~ 341 (507)
T PHA03392 267 VQYLGGLHLHKKP--PQPLD--DYLEEFLNNS-TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEA 341 (507)
T ss_pred eeeecccccCCCC--CCCCC--HHHHHHHhcC-CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCc
Confidence 9999999875321 12233 4489999985 46899999999864 678899999999999999999998753210
Q ss_pred CCccccCCchhHHHhhCCCceEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhhe
Q 014232 284 ASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWR 363 (428)
Q Consensus 284 ~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g 363 (428)
..+| +|+++.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+|+++ +|
T Consensus 342 -----~~~p--------~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~-~G 407 (507)
T PHA03392 342 -----INLP--------ANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE-LG 407 (507)
T ss_pred -----ccCC--------CceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHH-cC
Confidence 0134 555999999999999999999999999999999999999999999999999999999987 69
Q ss_pred eEEEcCC-ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 014232 364 IGLQLEN-DLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVEL 406 (428)
Q Consensus 364 ~g~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~ 406 (428)
+|+.+++ ++++++|.++|+++++| ++||+||+++++.+++
T Consensus 408 ~G~~l~~~~~t~~~l~~ai~~vl~~---~~y~~~a~~ls~~~~~ 448 (507)
T PHA03392 408 IGRALDTVTVSAAQLVLAIVDVIEN---PKYRKNLKELRHLIRH 448 (507)
T ss_pred cEEEeccCCcCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHh
Confidence 9999986 89999999999999999 9999999999999995
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=7.1e-56 Score=436.75 Aligned_cols=371 Identities=24% Similarity=0.338 Sum_probs=228.0
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCC-CCCCCceEEEcCCCCCCCCCCc--CCH--------------HHHH-------
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNP-SNHPKFSFQSIPEGLADDDIYS--GNI--------------IAII------- 56 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~-~~~~gi~f~~l~~~~~~~~~~~--~~~--------------~~~~------- 56 (428)
|..|+++|++|||+||++++....... ....++++..++...+...... ... ...+
T Consensus 16 ~~~l~~~L~~rGH~VTvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (500)
T PF00201_consen 16 MRPLAEELAERGHNVTVLTPSPSSSLNPSKPSNIRFETYPDPYPEEEFEEIFPEFISKFFSESSFANSFWEMFKMLNAFF 95 (500)
T ss_dssp HHHHHHHHHHH-TTSEEEHHHHHHT------S-CCEEEE-----TT------TTHHHHHHHHHCCHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHhcCCceEEEEeecccccccccccceeeEEEcCCcchHHHhhhhHHHHHHHhhhcccchhHHHHHHHHHHHH
Confidence 467999999999999999876422111 1224677777775443322110 110 0111
Q ss_pred HHHHHhhchhHH--HHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCC
Q 014232 57 MHLNANCGAPFH--KCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIP 134 (428)
Q Consensus 57 ~~~~~~~~~~l~--~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 134 (428)
......|+..+. ++++.+. .. ++|++|+|.+.+|+..+|+.+++|.+.+.+..+.........+.+.+++|+|
T Consensus 96 ~~~~~~C~~~l~d~~l~~~l~-~~----~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~~~~~~~~g~p~~psyvP 170 (500)
T PF00201_consen 96 DFFSKSCEDLLSDPELMEQLK-SE----KFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMYDLSSFSGGVPSPPSYVP 170 (500)
T ss_dssp HS----E--EEEETTSTTHHH-HH----HHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCSCCTCCTSCCCTSTTSTT
T ss_pred HHHHHHHHHHhhHHHHHHHHH-hh----ccccceEeeccchhHHHHHHhcCCeEEEecccccchhhhhccCCCCChHHhc
Confidence 111122322222 2223333 22 7999999999999999999999999876544321111111113344556665
Q ss_pred CC-----CCCCCCCCCCCCCCC-CCCCCCCC-cCCCChHHHHHHH---h-hhccCCccEEEEcCchhhhHHHHHHHHhhC
Q 014232 135 LQ-----DPSNLADPVPRLQPL-RFKDLPFS-QFGLPENFLQLIP---K-IYNVRTSKAVIWNTMNCIEQSSLSQLQQQC 203 (428)
Q Consensus 135 ~~-----~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~---~-~~~~~~~~~~l~ns~~~le~~~l~~~~~~~ 203 (428)
.. +.+++..|+.|+... ....+... .........+.+. . .+...+.+.+++|+.+.++.| ++.
T Consensus 171 ~~~s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld~p-----rp~- 244 (500)
T PF00201_consen 171 SMFSDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSPQDKLYKKYFGFPFSFRELLSNASLVLINSHPSLDFP-----RPL- 244 (500)
T ss_dssp CBCCCSGTTSSSST--TTSHHHHHHHHHHHHGGGS-TTS-EEESS-GGGCHHHHHHHHHCCSSTEEE---------HHH-
T ss_pred cccccCCCccchhhhhhhhhhhhhhccccccchhhHHHHHhhhcccccccHHHHHHHHHHhhhccccCcCC-----cch-
Confidence 42 224555555554210 00000000 0000000001111 1 223345677888998888744 454
Q ss_pred CCCcceeccCCCCCCCCCCCCccccchhhhhcccCCCCcEEEEEeccccc-CCHHHHHHHHHHHHhCCCCeEEEEcCCCC
Q 014232 204 NIPIFPVGPLHKFAPSSPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVS-MDKKELKEMAWGLYNSKQPFLWVLRPSST 282 (428)
Q Consensus 204 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~ 282 (428)
++++++||+++...++ +++.+ +..|++..+++++|||||||+.. ++.+..++++++|++++++|||++++.
T Consensus 245 ~p~v~~vGgl~~~~~~----~l~~~--~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~-- 316 (500)
T PF00201_consen 245 LPNVVEVGGLHIKPAK----PLPEE--LWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGE-- 316 (500)
T ss_dssp HCTSTTGCGC-S--------TCHHH--HHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCS--
T ss_pred hhcccccCcccccccc----ccccc--cchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCccccccccc--
Confidence 3579999999886543 34444 88999975578999999999986 566668899999999999999999763
Q ss_pred CCCccccCCchhHHHhhCCCceEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhh
Q 014232 283 SASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVW 362 (428)
Q Consensus 283 ~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~ 362 (428)
.+.+ .++|+++.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+++++ .
T Consensus 317 --------~~~~----l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~-~ 383 (500)
T PF00201_consen 317 --------PPEN----LPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEE-K 383 (500)
T ss_dssp --------HGCH----HHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHH-T
T ss_pred --------cccc----ccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEE-E
Confidence 1222 23566999999999999999999999999999999999999999999999999999999988 5
Q ss_pred eeEEEcCC-ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 014232 363 RIGLQLEN-DLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVEL 406 (428)
Q Consensus 363 g~g~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~ 406 (428)
|+|+.++. ++|+++|.++|+++|+| ++|++||+++++.+++
T Consensus 384 G~g~~l~~~~~~~~~l~~ai~~vl~~---~~y~~~a~~ls~~~~~ 425 (500)
T PF00201_consen 384 GVGVVLDKNDLTEEELRAAIREVLEN---PSYKENAKRLSSLFRD 425 (500)
T ss_dssp TSEEEEGGGC-SHHHHHHHHHHHHHS---HHHHHHHHHHHHTTT-
T ss_pred eeEEEEEecCCcHHHHHHHHHHHHhh---hHHHHHHHHHHHHHhc
Confidence 99999996 89999999999999999 9999999999999985
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=1e-44 Score=357.68 Aligned_cols=377 Identities=30% Similarity=0.432 Sum_probs=244.6
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCC-C--CCce--------EEEcCCCCCCCCCCcC-CHHHHHHHHHHhhchhHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSN-H--PKFS--------FQSIPEGLADDDIYSG-NIIAIIMHLNANCGAPFH 68 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~-~--~gi~--------f~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ 68 (428)
|+.||++|+++||+||++++..+...... . ..+. +...+++++....... ........+...|...+.
T Consensus 22 ~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (496)
T KOG1192|consen 22 MLQLAKRLAERGHNVTVVTPSFNALKLSKSSKSKSIKKINPPPFEFLTIPDGLPEGWEDDDLDISESLLELNKTCEDLLR 101 (496)
T ss_pred HHHHHHHHHHcCCceEEEEeechhcccCCcccceeeeeeecChHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47899999999999999998866544321 1 1111 1111123333322110 111224455666777777
Q ss_pred HHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcC-CceEEEecccHHHHHHHHhHhhhhhcCCCCCCCC------CCC
Q 014232 69 KCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLK-LRSIILRTNSAATQISRIALLQLKEDGSIPLQDP------SNL 141 (428)
Q Consensus 69 ~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lg-iP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~~ 141 (428)
+.+..+.... .. ++|++|+|.+..|...+|.... |+..++++.++..... ..+.+..++|.... +.+
T Consensus 102 ~~~~~~~~~~-~~-~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----g~~~~~~~~p~~~~~~~~~~~~~ 175 (496)
T KOG1192|consen 102 DPLEKLLLLK-SE-KFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLAL----GLPSPLSYVPSPFSLSSGDDMSF 175 (496)
T ss_pred chHHHHHHhh-cC-CccEEEechhhHHHHHhcccceEEEeecccCchHHHHhc----CCcCcccccCcccCccccccCcH
Confidence 6555544332 12 4999999998777887787765 8888888886654332 22233334443221 111
Q ss_pred CCCCCCCCCCCCCCCCCCcCC-----C-ChHHHHHHHh--------hhccCCccEEEEcCchhhhHHHHHHHHhhCCCCc
Q 014232 142 ADPVPRLQPLRFKDLPFSQFG-----L-PENFLQLIPK--------IYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPI 207 (428)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~--------~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v 207 (428)
..+..++ ....++..... . .......... .....+++..++|+...++.. .....+++
T Consensus 176 ~~~~~n~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~-----~~~~~~~v 247 (496)
T KOG1192|consen 176 PERVPNL---IKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFE-----PRPLLPKV 247 (496)
T ss_pred HHHHHHH---HHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCC-----CCCCCCCc
Confidence 1111111 00111100000 0 0001111111 123445556677776555431 11134669
Q ss_pred ceeccCCCCCCCCCCCCccccchhhhhcccCCCC--cEEEEEecccc---cCCHHHHHHHHHHHHhC-CCCeEEEEcCCC
Q 014232 208 FPVGPLHKFAPSSPGSLLKEDTSCISWLNNQAPN--SVLYVSLGSIV---SMDKKELKEMAWGLYNS-KQPFLWVLRPSS 281 (428)
Q Consensus 208 ~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~vv~vsfGS~~---~~~~~~~~~~~~al~~~-~~~~iw~~~~~~ 281 (428)
++|||++..... .... .+.+|++..++. ++|||||||++ .++.++..+++.+++.+ +++|||+++...
T Consensus 248 ~~IG~l~~~~~~----~~~~--~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~ 321 (496)
T KOG1192|consen 248 IPIGPLHVKDSK----QKSP--LPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDD 321 (496)
T ss_pred eEECcEEecCcc----cccc--ccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCc
Confidence 999999997432 1111 257788876655 99999999998 69999999999999999 888999998642
Q ss_pred CCCCccccCCchhHHHhhCCCceEEeecChHhh-hccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhh
Q 014232 282 TSASSGIELLPEGFEEAVGENGCVVKWAPQKDV-LSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSH 360 (428)
Q Consensus 282 ~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~i-L~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~ 360 (428)
.. .+++++.++.++|+...+|+||.++ |.|+++|+||||||||||+|++++|||||++|+++||+.||+++++
T Consensus 322 ~~------~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~ 395 (496)
T KOG1192|consen 322 SI------YFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVR 395 (496)
T ss_pred ch------hhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHh
Confidence 11 0233332222346677899999999 5999999999999999999999999999999999999999999999
Q ss_pred hheeEEEcCCccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 014232 361 VWRIGLQLENDLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVEL 406 (428)
Q Consensus 361 ~~g~g~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~ 406 (428)
++++++.....++.+.+..++++++++ ++|+++|+++++.+++
T Consensus 396 ~g~~~v~~~~~~~~~~~~~~~~~il~~---~~y~~~~~~l~~~~~~ 438 (496)
T KOG1192|consen 396 HGGGGVLDKRDLVSEELLEAIKEILEN---EEYKEAAKRLSEILRD 438 (496)
T ss_pred CCCEEEEehhhcCcHHHHHHHHHHHcC---hHHHHHHHHHHHHHHc
Confidence 755555555567777799999999999 9999999999999873
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=5.2e-42 Score=327.84 Aligned_cols=365 Identities=18% Similarity=0.233 Sum_probs=245.0
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCC-CC-Cc--CCHHHHHHHHHHhhchhHHHHHHHHHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADD-DI-YS--GNIIAIIMHLNANCGAPFHKCLVQMMK 76 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~-~~-~~--~~~~~~~~~~~~~~~~~l~~~l~~l~~ 76 (428)
|++||++|++|||+|+|++++.+...+... |++|+++++..+.. .. .. .+.......+...+...+.+++ ++.+
T Consensus 12 ~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ 89 (392)
T TIGR01426 12 TLGVVEELVARGHRVTYATTEEFAERVEAA-GAEFVLYGSALPPPDNPPENTEEEPIDIIEKLLDEAEDVLPQLE-EAYK 89 (392)
T ss_pred cHHHHHHHHhCCCeEEEEeCHHHHHHHHHc-CCEEEecCCcCccccccccccCcchHHHHHHHHHHHHHHHHHHH-HHhc
Confidence 689999999999999999999877776664 99999998654321 10 00 2233333334343444443333 3333
Q ss_pred ccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014232 77 QQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQPLRFKDL 156 (428)
Q Consensus 77 ~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 156 (428)
.. +||+||+|.+++++..+|+++|||+|.+++.+... ..++.+. .|... ..+. ......+.+
T Consensus 90 ~~----~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~----~~~~~~~----~~~~~--~~~~----~~~~~~~~~ 151 (392)
T TIGR01426 90 GD----RPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN----EEFEEMV----SPAGE--GSAE----EGAIAERGL 151 (392)
T ss_pred CC----CCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc----ccccccc----cccch--hhhh----hhccccchh
Confidence 33 79999999988899999999999999886542110 0011000 01110 0000 000000000
Q ss_pred CCCcCCCChHHHHHHHh--hh-----c--cCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCCCCCCCCCccc
Q 014232 157 PFSQFGLPENFLQLIPK--IY-----N--VRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFAPSSPGSLLKE 227 (428)
Q Consensus 157 ~~~~~~~~~~~~~~~~~--~~-----~--~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~ 227 (428)
. ...+...++..+ .. . ....+..+..+.+.|+ +.++.+|.+++++||+......
T Consensus 152 ~----~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~-----~~~~~~~~~~~~~Gp~~~~~~~-------- 214 (392)
T TIGR01426 152 A----EYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQ-----PAGETFDDSFTFVGPCIGDRKE-------- 214 (392)
T ss_pred H----HHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhC-----CCccccCCCeEEECCCCCCccc--------
Confidence 0 000001111111 00 0 1122223444444443 3345677889999998764321
Q ss_pred cchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEe
Q 014232 228 DTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVK 307 (428)
Q Consensus 228 ~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~ 307 (428)
...|....+++++|||||||+....+..++.+++++.+.+.+++|..+.+.. .+.+ ...++|+.+.+
T Consensus 215 ---~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~---------~~~~-~~~~~~v~~~~ 281 (392)
T TIGR01426 215 ---DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVD---------PADL-GELPPNVEVRQ 281 (392)
T ss_pred ---cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCC---------hhHh-ccCCCCeEEeC
Confidence 1235555566889999999987766678889999999999999998765421 0111 12345668999
Q ss_pred ecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC-ccCHHHHHHHHHHHhc
Q 014232 308 WAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN-DLEKGEVEKAVKQLMV 386 (428)
Q Consensus 308 ~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~-~~~~~~l~~ai~~vl~ 386 (428)
|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||+++++ +|+|+.+.. .+++++|.++|++++.
T Consensus 282 ~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~-~g~g~~l~~~~~~~~~l~~ai~~~l~ 358 (392)
T TIGR01426 282 WVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAE-LGLGRHLPPEEVTAEKLREAVLAVLS 358 (392)
T ss_pred CCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHH-CCCEEEeccccCCHHHHHHHHHHHhc
Confidence 9999999999998 99999999999999999999999999999999999987 699999985 7999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 014232 387 EKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFF 425 (428)
Q Consensus 387 ~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 425 (428)
| ++|+++++++++.++ ..++...+++.+.+.+
T Consensus 359 ~---~~~~~~~~~l~~~~~----~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 359 D---PRYAERLRKMRAEIR----EAGGARRAADEIEGFL 390 (392)
T ss_pred C---HHHHHHHHHHHHHHH----HcCCHHHHHHHHHHhh
Confidence 9 899999999999998 4566677777666554
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=4.4e-39 Score=309.13 Aligned_cols=346 Identities=16% Similarity=0.144 Sum_probs=221.2
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCC-----------cCCHHHHHHHHHHhhchhHHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADDDIY-----------SGNIIAIIMHLNANCGAPFHK 69 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~ 69 (428)
|++||++|++|||+|+|++++.....+.. .|++|+++++..+..... ..........+...+...+.+
T Consensus 17 ~l~la~~L~~rGh~V~~~t~~~~~~~v~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (401)
T cd03784 17 LVALAWALRAAGHEVRVATPPEFADLVEA-AGLEFVPVGGDPDELLASPERNAGLLLLGPGLLLGALRLLRREAEAMLDD 95 (401)
T ss_pred HHHHHHHHHHCCCeEEEeeCHhHHHHHHH-cCCceeeCCCCHHHHHhhhhhcccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999966655554 499999998643221100 001112223333344444444
Q ss_pred HHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCC
Q 014232 70 CLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQ 149 (428)
Q Consensus 70 ~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 149 (428)
+++.+. .. ++|+||+|.+.+++..+|+++|||++.+++++...... ..|.. +..
T Consensus 96 ~~~~~~-~~----~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-----------~~~~~----------~~~ 149 (401)
T cd03784 96 LVAAAR-DW----GPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSA-----------FPPPL----------GRA 149 (401)
T ss_pred HHHHhc-cc----CCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCcccc-----------CCCcc----------chH
Confidence 444432 22 79999999988999999999999999999875321110 00000 000
Q ss_pred CCCCCCCCCCcCCCChHHHHHHHh------hhcc----CCccEEEEcCchhhhHHHHHHHHhhCCCCcceec-cCCCCCC
Q 014232 150 PLRFKDLPFSQFGLPENFLQLIPK------IYNV----RTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVG-PLHKFAP 218 (428)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~----~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vG-pl~~~~~ 218 (428)
......... ...........+.. .... ...+..+....+.+. ..++.++....++| ++...+.
T Consensus 150 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~ 223 (401)
T cd03784 150 NLRLYALLE-AELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVL-----PPPPDWPRFDLVTGYGFRDVPY 223 (401)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccC-----CCCCCccccCcEeCCCCCCCCC
Confidence 000000000 00000000000000 0000 001111111111111 12234555577775 3332221
Q ss_pred CCCCCCccccchhhhhcccCCCCcEEEEEeccccc-CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHH
Q 014232 219 SSPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVS-MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEE 297 (428)
Q Consensus 219 ~~~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~ 297 (428)
. ...+.++..|++. .+++|||||||+.. .....+..++++++..+.++||+.+...... .
T Consensus 224 ~-----~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~------------~ 284 (401)
T cd03784 224 N-----GPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGA------------E 284 (401)
T ss_pred C-----CCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccc------------c
Confidence 1 1223446788875 46799999999987 4456678899999999999999987643110 1
Q ss_pred hhCCCceEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC-ccCHHH
Q 014232 298 AVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN-DLEKGE 376 (428)
Q Consensus 298 ~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~-~~~~~~ 376 (428)
..++|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|...||+.||+++++ +|+|+.++. .++.++
T Consensus 285 ~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~-~G~g~~l~~~~~~~~~ 361 (401)
T cd03784 285 DLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAE-LGAGPALDPRELTAER 361 (401)
T ss_pred CCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHH-CCCCCCCCcccCCHHH
Confidence 22456699999999999999999 99999999999999999999999999999999999987 699999975 789999
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 014232 377 VEKAVKQLMVEKEGQEMRQRAKNLKEDVE 405 (428)
Q Consensus 377 l~~ai~~vl~~~~~~~~~~~a~~l~~~~~ 405 (428)
|.++|++++++ + ++++++++++.++
T Consensus 362 l~~al~~~l~~---~-~~~~~~~~~~~~~ 386 (401)
T cd03784 362 LAAALRRLLDP---P-SRRRAAALLRRIR 386 (401)
T ss_pred HHHHHHHHhCH---H-HHHHHHHHHHHHH
Confidence 99999999987 4 5666777777775
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=294.00 Aligned_cols=373 Identities=17% Similarity=0.183 Sum_probs=225.6
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCC-CC-CcCCHHHHHHHHHHhhchhHHHHHHHHHHcc
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADD-DI-YSGNIIAIIMHLNANCGAPFHKCLVQMMKQQ 78 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 78 (428)
+++||++|.++||+|+|++++.+....++. |+.|..++....+. .. ...+..+.+............+.++-+.+.
T Consensus 18 ~~aL~~eL~~~gheV~~~~~~~~~~~ve~a-g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~- 95 (406)
T COG1819 18 CLALGKELRRRGHEVVFASTGKFKEFVEAA-GLAFVAYPIRDSELATEDGKFAGVKSFRRLLQQFKKLIRELLELLREL- 95 (406)
T ss_pred hHHHHHHHHhcCCeEEEEeCHHHHHHHHHh-CcceeeccccCChhhhhhhhhhccchhHHHhhhhhhhhHHHHHHHHhc-
Confidence 478999999999999999999888877765 78888887531111 11 000111111101122222222333333332
Q ss_pred CCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014232 79 MPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQPLRFKDLPF 158 (428)
Q Consensus 79 ~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 158 (428)
.+|.++.|.....+ .+++..++|++.......+....... ..++.........+...++.......
T Consensus 96 ----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-- 161 (406)
T COG1819 96 ----EPDLVVDDARLSLG-LAARLLGIPVVGINVAPYTPLPAAGL-------PLPPVGIAGKLPIPLYPLPPRLVRPL-- 161 (406)
T ss_pred ----chhhhhcchhhhhh-hhhhhcccchhhhhhhhccCCccccc-------CcccccccccccccccccChhhcccc--
Confidence 68999988765545 88888999998876653321111100 00000000000000010110000000
Q ss_pred CcCCCChHHHHHHHh---hhccCCccEEEEcCchhhhHHHHHH--HH-hhCCCCcceeccCCCCCCCCCCCCccccchhh
Q 014232 159 SQFGLPENFLQLIPK---IYNVRTSKAVIWNTMNCIEQSSLSQ--LQ-QQCNIPIFPVGPLHKFAPSSPGSLLKEDTSCI 232 (428)
Q Consensus 159 ~~~~~~~~~~~~~~~---~~~~~~~~~~l~ns~~~le~~~l~~--~~-~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~ 232 (428)
.............+ .......-.-+...-+.++..+.+. .. ..+|....++||+...... +..
T Consensus 162 -~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----------~~~ 230 (406)
T COG1819 162 -IFARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGPYIGPLLGEAAN----------ELP 230 (406)
T ss_pred -ccchhhhhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCCCCCCCcCccccccccccc----------cCc
Confidence 00000000000000 0000000000011111111111110 00 1123336677777664432 122
Q ss_pred hhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChH
Q 014232 233 SWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQK 312 (428)
Q Consensus 233 ~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~ 312 (428)
.|.. .++++|||||||+... .++++.+++++..++.+||...++.. . ....+|.|+ .+.+|+||.
T Consensus 231 ~~~~--~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~~-~---~~~~~p~n~--------~v~~~~p~~ 295 (406)
T COG1819 231 YWIP--ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGAR-D---TLVNVPDNV--------IVADYVPQL 295 (406)
T ss_pred chhc--CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccccc-c---ccccCCCce--------EEecCCCHH
Confidence 2333 3577999999999977 88899999999999999999886621 1 123466665 899999999
Q ss_pred hhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC-ccCHHHHHHHHHHHhcCchhH
Q 014232 313 DVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN-DLEKGEVEKAVKQLMVEKEGQ 391 (428)
Q Consensus 313 ~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~-~~~~~~l~~ai~~vl~~~~~~ 391 (428)
.+|+++++ ||||||+|||+|||++|||+|++|...||+.||.|+++ +|+|+.+.. .++++.|+++|+++|++ +
T Consensus 296 ~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~-~G~G~~l~~~~l~~~~l~~av~~vL~~---~ 369 (406)
T COG1819 296 ELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE-LGAGIALPFEELTEERLRAAVNEVLAD---D 369 (406)
T ss_pred HHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH-cCCceecCcccCCHHHHHHHHHHHhcC---H
Confidence 99999999 99999999999999999999999999999999999977 799999996 89999999999999999 9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 014232 392 EMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFF 425 (428)
Q Consensus 392 ~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 425 (428)
.|+++++++++.++. .++....++.+.+..
T Consensus 370 ~~~~~~~~~~~~~~~----~~g~~~~a~~le~~~ 399 (406)
T COG1819 370 SYRRAAERLAEEFKE----EDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHHHHHHHHHhhh----cccHHHHHHHHHHHH
Confidence 999999999999994 444444444444433
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.86 E-value=5.3e-20 Score=171.20 Aligned_cols=287 Identities=15% Similarity=0.150 Sum_probs=173.8
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHH---hhchhHHHHHHHHHHcc
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNA---NCGAPFHKCLVQMMKQQ 78 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~l~~l~~~~ 78 (428)
+.||++| |||+|+|++.......... .+....+++-.........+..+....... .....+.+..+.+ +..
T Consensus 19 ~~la~~L--rg~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~ 93 (318)
T PF13528_consen 19 LALARAL--RGHEVTFITSGPAPEFLKP--RFPVREIPGLGPIQENGRLDRWKTVRNNIRWLARLARRIRREIRWL-REF 93 (318)
T ss_pred HHHHHHH--ccCceEEEEcCCcHHHhcc--ccCEEEccCceEeccCCccchHHHHHHHHHhhHHHHHHHHHHHHHH-Hhc
Confidence 6899999 6999999998754433332 245666653322222222233222222221 2223333333333 332
Q ss_pred CCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014232 79 MPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQPLRFKDLPF 158 (428)
Q Consensus 79 ~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 158 (428)
+||+||+|. .+.+..+|+..|||++.+........ +....+.
T Consensus 94 ----~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~~~----------~~~~~~~----------------------- 135 (318)
T PF13528_consen 94 ----RPDLVISDF-YPLAALAARRAGIPVIVISNQYWFLH----------PNFWLPW----------------------- 135 (318)
T ss_pred ----CCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHccc----------ccCCcch-----------------------
Confidence 899999995 55577889999999999887732110 0000000
Q ss_pred CcCCCChHHHHHHHh--hhc-cCCccEEEEcCchhhhHHHHHHHHhhCCCCcceeccCCCCCCCCCCCCccccchhhhhc
Q 014232 159 SQFGLPENFLQLIPK--IYN-VRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVGPLHKFAPSSPGSLLKEDTSCISWL 235 (428)
Q Consensus 159 ~~~~~~~~~~~~~~~--~~~-~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l 235 (428)
.......+.+ ... ...++..+.-++. ... . ....+.++||+...... ...
T Consensus 136 -----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~-------~-~~~~~~~~~p~~~~~~~------~~~------- 188 (318)
T PF13528_consen 136 -----DQDFGRLIERYIDRYHFPPADRRLALSFY-PPL-------P-PFFRVPFVGPIIRPEIR------ELP------- 188 (318)
T ss_pred -----hhhHHHHHHHhhhhccCCcccceecCCcc-ccc-------c-ccccccccCchhccccc------ccC-------
Confidence 0001111111 111 2333333333332 110 0 01236678887664322 111
Q ss_pred ccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCC-CCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeec--ChH
Q 014232 236 NNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSK-QPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWA--PQK 312 (428)
Q Consensus 236 ~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~--pq~ 312 (428)
..+++.|+|+||..... .++++++..+ .++++. +.... +...+|+.+.++. ...
T Consensus 189 --~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~--------------~~~~~ni~~~~~~~~~~~ 245 (318)
T PF13528_consen 189 --PEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA--------------DPRPGNIHVRPFSTPDFA 245 (318)
T ss_pred --CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc--------------cccCCCEEEeecChHHHH
Confidence 01345799999988643 6677777776 566554 43310 0113556888865 455
Q ss_pred hhhccCCcCceeeccccchhHHhhhcCCceecccc--ccchhhhHHHHhhhheeEEEcCC-ccCHHHHHHHHHHH
Q 014232 313 DVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPG--FGDQRVSARYVSHVWRIGLQLEN-DLEKGEVEKAVKQL 384 (428)
Q Consensus 313 ~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~--~~DQ~~na~~v~~~~g~g~~l~~-~~~~~~l~~ai~~v 384 (428)
++|..+++ +|||||+||++|+++.|+|++++|. +.+|..||+++++ +|+|+.++. +++++.|.++|+++
T Consensus 246 ~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 246 ELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred HHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEcccccCCHHHHHHHHhcC
Confidence 79999999 9999999999999999999999999 7899999999977 799999985 89999999999764
No 29
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.86 E-value=2.1e-19 Score=167.88 Aligned_cols=304 Identities=13% Similarity=0.098 Sum_probs=180.8
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHccCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPN-PSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQMP 80 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~-~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 80 (428)
++||++|.++||+|.|+++...... .....|+.|+.++.. .... ......+..........+ ..+. +.+..
T Consensus 19 la~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~---~l~~-~~~~~~~~~~~~~~~~~~-~~~~-i~~~~-- 90 (352)
T PRK12446 19 LAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSG---KLRR-YFDLKNIKDPFLVMKGVM-DAYV-RIRKL-- 90 (352)
T ss_pred HHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEecc---CcCC-CchHHHHHHHHHHHHHHH-HHHH-HHHhc--
Confidence 6899999999999999997744322 112237888888732 1111 111112222212211111 1212 22322
Q ss_pred CCCceEEEEcCchh--hHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014232 81 ADEIVCIIYDELMY--FAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQPLRFKDLPF 158 (428)
Q Consensus 81 ~~~~D~vI~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 158 (428)
+||+||....+. .+..+|..+++|+++.-............
T Consensus 91 --kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~~nr~~----------------------------------- 133 (352)
T PRK12446 91 --KPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGLANKIA----------------------------------- 133 (352)
T ss_pred --CCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccHHHHHH-----------------------------------
Confidence 899999877553 35788889999998866542111111000
Q ss_pred CcCCCChHHHHHHHhhhccCCccEEEEcCchhhhHHHHHHHHhhCC-CCcceeccCCCCCCCCCCCCccccchhhhhccc
Q 014232 159 SQFGLPENFLQLIPKIYNVRTSKAVIWNTMNCIEQSSLSQLQQQCN-IPIFPVGPLHKFAPSSPGSLLKEDTSCISWLNN 237 (428)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~ 237 (428)
.+-++.+++ ++++- ...++ .+++++|+-....-. . .... ...+.+.-
T Consensus 134 ------------------~~~a~~v~~-~f~~~--------~~~~~~~k~~~tG~Pvr~~~~---~-~~~~-~~~~~~~l 181 (352)
T PRK12446 134 ------------------LRFASKIFV-TFEEA--------AKHLPKEKVIYTGSPVREEVL---K-GNRE-KGLAFLGF 181 (352)
T ss_pred ------------------HHhhCEEEE-Eccch--------hhhCCCCCeEEECCcCCcccc---c-ccch-HHHHhcCC
Confidence 011222222 22110 12233 347888865443211 0 0011 11122222
Q ss_pred CCCCcEEEEEecccccCCH-HHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeec-C-hHhh
Q 014232 238 QAPNSVLYVSLGSIVSMDK-KELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWA-P-QKDV 314 (428)
Q Consensus 238 ~~~~~vv~vsfGS~~~~~~-~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~-p-q~~i 314 (428)
.+++++|+|.-||...... +.+..++..+.. +.+++|..+.+.. +...++. .+..+.+|+ + -.++
T Consensus 182 ~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~~----------~~~~~~~-~~~~~~~f~~~~m~~~ 249 (352)
T PRK12446 182 SRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGNL----------DDSLQNK-EGYRQFEYVHGELPDI 249 (352)
T ss_pred CCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCchH----------HHHHhhc-CCcEEecchhhhHHHH
Confidence 2456799999999986333 334444444432 4788888775421 1111111 233556777 4 4479
Q ss_pred hccCCcCceeeccccchhHHhhhcCCceeccccc-----cchhhhHHHHhhhheeEEEcCC-ccCHHHHHHHHHHHhcCc
Q 014232 315 LSHIAVGGFWSHCGWNSTLESICEGVPMICRPGF-----GDQRVSARYVSHVWRIGLQLEN-DLEKGEVEKAVKQLMVEK 388 (428)
Q Consensus 315 L~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~-----~DQ~~na~~v~~~~g~g~~l~~-~~~~~~l~~ai~~vl~~~ 388 (428)
|.++++ +|||||.+|+.|++++|+|+|++|+. +||..||+.+++ .|+|..+.. .++++.|.+++.+++.|.
T Consensus 250 ~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~-~g~~~~l~~~~~~~~~l~~~l~~ll~~~ 326 (352)
T PRK12446 250 LAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER-QGYASVLYEEDVTVNSLIKHVEELSHNN 326 (352)
T ss_pred HHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH-CCCEEEcchhcCCHHHHHHHHHHHHcCH
Confidence 999999 99999999999999999999999985 589999999987 699999875 899999999999999872
Q ss_pred hhHHHHHHHHH
Q 014232 389 EGQEMRQRAKN 399 (428)
Q Consensus 389 ~~~~~~~~a~~ 399 (428)
+.|++++++
T Consensus 327 --~~~~~~~~~ 335 (352)
T PRK12446 327 --EKYKTALKK 335 (352)
T ss_pred --HHHHHHHHH
Confidence 245554443
No 30
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.82 E-value=2.9e-18 Score=159.13 Aligned_cols=121 Identities=18% Similarity=0.245 Sum_probs=88.7
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHhCCC-CeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecC--hHhhhcc
Q 014232 241 NSVLYVSLGSIVSMDKKELKEMAWGLYNSKQ-PFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAP--QKDVLSH 317 (428)
Q Consensus 241 ~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~-~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~p--q~~iL~~ 317 (428)
++.|+|.+||... +.+++++++.+. .++ +..... ..+ ..++|+.+.+|.| ..++|+.
T Consensus 188 ~~~iLv~~g~~~~------~~l~~~l~~~~~~~~i--~~~~~~--------~~~----~~~~~v~~~~~~~~~~~~~l~~ 247 (321)
T TIGR00661 188 EDYILVYIGFEYR------YKILELLGKIANVKFV--CYSYEV--------AKN----SYNENVEIRRITTDNFKELIKN 247 (321)
T ss_pred CCcEEEECCcCCH------HHHHHHHHhCCCeEEE--EeCCCC--------Ccc----ccCCCEEEEECChHHHHHHHHh
Confidence 4568888888542 455777777653 333 222110 111 1235668889997 4567888
Q ss_pred CCcCceeeccccchhHHhhhcCCceecccccc--chhhhHHHHhhhheeEEEcCC-ccCHHHHHHHHHHHhcC
Q 014232 318 IAVGGFWSHCGWNSTLESICEGVPMICRPGFG--DQRVSARYVSHVWRIGLQLEN-DLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 318 ~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~g~g~~l~~-~~~~~~l~~ai~~vl~~ 387 (428)
+++ +|||||++|++|++++|+|++++|..+ ||..||+.+++ .|+|+.++. ++ ++.+++.+++++
T Consensus 248 ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~~~~l~~~~~---~~~~~~~~~~~~ 314 (321)
T TIGR00661 248 AEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGCGIALEYKEL---RLLEAILDIRNM 314 (321)
T ss_pred CCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCCEEEcChhhH---HHHHHHHhcccc
Confidence 888 999999999999999999999999965 89999999987 699999885 44 666677677777
No 31
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.73 E-value=1.5e-15 Score=143.70 Aligned_cols=115 Identities=16% Similarity=0.183 Sum_probs=92.4
Q ss_pred CceEEeec-ChHhhhccCCcCceeeccccchhHHhhhcCCceecccc----ccchhhhHHHHhhhheeEEEcCC-ccCHH
Q 014232 302 NGCVVKWA-PQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPG----FGDQRVSARYVSHVWRIGLQLEN-DLEKG 375 (428)
Q Consensus 302 ~~~v~~~~-pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~~v~~~~g~g~~l~~-~~~~~ 375 (428)
++.+.+|+ +..++|+.+++ +|+|+|.++++||+++|+|+|++|. .+||..|+..+.+ .|.|+.+.. .++++
T Consensus 236 ~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~~~~~ 312 (357)
T PRK00726 236 NAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-AGAALLIPQSDLTPE 312 (357)
T ss_pred cEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEcccCCHH
Confidence 35677998 45689999999 9999999999999999999999997 4689999999987 599999875 67899
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 376 EVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 376 ~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
.|.+++.++++| +++++...+-+.... +.++..+.++.+++.+.
T Consensus 313 ~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 313 KLAEKLLELLSD---PERLEAMAEAARALG----KPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHHcC---HHHHHHHHHHHHhcC----CcCHHHHHHHHHHHHhh
Confidence 999999999999 555544444333332 56667777777776654
No 32
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.72 E-value=3e-15 Score=138.32 Aligned_cols=147 Identities=20% Similarity=0.222 Sum_probs=107.3
Q ss_pred CCcEEEEEecccccCC-HHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhC-CC-ceEEeecChH-hhh
Q 014232 240 PNSVLYVSLGSIVSMD-KKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVG-EN-GCVVKWAPQK-DVL 315 (428)
Q Consensus 240 ~~~vv~vsfGS~~~~~-~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~-~~-~~v~~~~pq~-~iL 315 (428)
++++|+|.-||..... .+.+..++..+.+ +..+++..+.+. .+....... .+ ..+.+|..+. ++|
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~----------~~~~~~~~~~~~~~~v~~f~~dm~~~~ 250 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND----------LEELKSAYNELGVVRVLPFIDDMAALL 250 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch----------HHHHHHHHhhcCcEEEeeHHhhHHHHH
Confidence 4679999999997632 2233334444443 456666665431 122222221 22 5667888766 699
Q ss_pred ccCCcCceeeccccchhHHhhhcCCceeccccc----cchhhhHHHHhhhheeEEEcCC-ccCHHHHHHHHHHHhcCch-
Q 014232 316 SHIAVGGFWSHCGWNSTLESICEGVPMICRPGF----GDQRVSARYVSHVWRIGLQLEN-DLEKGEVEKAVKQLMVEKE- 389 (428)
Q Consensus 316 ~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~~g~g~~l~~-~~~~~~l~~ai~~vl~~~~- 389 (428)
+.+++ +||++|.+|+.|.++.|+|+|.+|.- .||..||+.+++ .|.|..++. .+|.+++.+.|.+++.+++
T Consensus 251 ~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~-~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~ 327 (357)
T COG0707 251 AAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK-AGAALVIRQSELTPEKLAELILRLLSNPEK 327 (357)
T ss_pred HhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHh-CCCEEEeccccCCHHHHHHHHHHHhcCHHH
Confidence 99999 99999999999999999999999973 489999999988 599999986 8999999999999998833
Q ss_pred hHHHHHHHHHH
Q 014232 390 GQEMRQRAKNL 400 (428)
Q Consensus 390 ~~~~~~~a~~l 400 (428)
..+|+++++.+
T Consensus 328 l~~m~~~a~~~ 338 (357)
T COG0707 328 LKAMAENAKKL 338 (357)
T ss_pred HHHHHHHHHhc
Confidence 45555555554
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.67 E-value=2.6e-14 Score=134.96 Aligned_cols=138 Identities=18% Similarity=0.177 Sum_probs=94.8
Q ss_pred CCcEEEEEecccccCC-HHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeec-ChHhhhcc
Q 014232 240 PNSVLYVSLGSIVSMD-KKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWA-PQKDVLSH 317 (428)
Q Consensus 240 ~~~vv~vsfGS~~~~~-~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~-pq~~iL~~ 317 (428)
++.+|++..|+..... .+.+..++..+.+.+..+++.++.+. . +.+.+.+.+. .+|+.+.+|. ...++|..
T Consensus 180 ~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~--~----~~l~~~~~~~-~~~v~~~g~~~~~~~~l~~ 252 (350)
T cd03785 180 GKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD--L----EEVKKAYEEL-GVNYEVFPFIDDMAAAYAA 252 (350)
T ss_pred CCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--H----HHHHHHHhcc-CCCeEEeehhhhHHHHHHh
Confidence 3445666666654321 12222333444333344556655431 1 1122222111 3678888998 55679999
Q ss_pred CCcCceeeccccchhHHhhhcCCceecccc----ccchhhhHHHHhhhheeEEEcCC-ccCHHHHHHHHHHHhcC
Q 014232 318 IAVGGFWSHCGWNSTLESICEGVPMICRPG----FGDQRVSARYVSHVWRIGLQLEN-DLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 318 ~~~~~~itHgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~~v~~~~g~g~~l~~-~~~~~~l~~ai~~vl~~ 387 (428)
+++ +|+|+|.++++||+.+|+|+|++|. ..+|..|+..+.+ .|.|+.++. ..+.+++.+++.+++++
T Consensus 253 ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~~~~~~l~~~i~~ll~~ 324 (350)
T cd03785 253 ADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVK-AGAAVLIPQEELTPERLAAALLELLSD 324 (350)
T ss_pred cCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCCCCHHHHHHHHHHHhcC
Confidence 999 9999999999999999999999986 4678999999987 599999875 47999999999999988
No 34
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.54 E-value=6.7e-12 Score=118.35 Aligned_cols=75 Identities=21% Similarity=0.311 Sum_probs=65.4
Q ss_pred ChHhhhccCCcCceeeccccchhHHhhhcCCceeccccc---cchhhhHHHHhhhheeEEEcCC-ccCHHHHHHHHHHHh
Q 014232 310 PQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGF---GDQRVSARYVSHVWRIGLQLEN-DLEKGEVEKAVKQLM 385 (428)
Q Consensus 310 pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~~v~~~~g~g~~l~~-~~~~~~l~~ai~~vl 385 (428)
+-.++|+.+++ +|+++|.++++||+++|+|+|++|.. ++|..|+..+++ .+.|..++. ..+.++|.+++.+++
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~-~~~G~~~~~~~~~~~~l~~~i~~ll 319 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED-LGAGLVIRQKELLPEKLLEALLKLL 319 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH-CCCEEEEecccCCHHHHHHHHHHHH
Confidence 45679999999 99999988999999999999999863 478889888876 599988864 568999999999999
Q ss_pred cC
Q 014232 386 VE 387 (428)
Q Consensus 386 ~~ 387 (428)
+|
T Consensus 320 ~~ 321 (348)
T TIGR01133 320 LD 321 (348)
T ss_pred cC
Confidence 88
No 35
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.49 E-value=1.6e-15 Score=126.87 Aligned_cols=135 Identities=19% Similarity=0.225 Sum_probs=94.5
Q ss_pred EEEEEecccccCCH-HHHHHHHHHHHhC--CCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecC-hHhhhccC
Q 014232 243 VLYVSLGSIVSMDK-KELKEMAWGLYNS--KQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAP-QKDVLSHI 318 (428)
Q Consensus 243 vv~vsfGS~~~~~~-~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~p-q~~iL~~~ 318 (428)
+|+|+.||.....- +.+..+...+... ..++++..|...... ....+ ++...|+.+.+|.+ ..+++..+
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~------~~~~~-~~~~~~v~~~~~~~~m~~~m~~a 73 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEE------LKIKV-ENFNPNVKVFGFVDNMAELMAAA 73 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHH------HCCCH-CCTTCCCEEECSSSSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHH------HHHHH-hccCCcEEEEechhhHHHHHHHc
Confidence 48999998764211 1122233333322 467888877642110 11111 11125678899999 77899999
Q ss_pred CcCceeeccccchhHHhhhcCCceecccccc----chhhhHHHHhhhheeEEEcCC-ccCHHHHHHHHHHHhcC
Q 014232 319 AVGGFWSHCGWNSTLESICEGVPMICRPGFG----DQRVSARYVSHVWRIGLQLEN-DLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 319 ~~~~~itHgG~~s~~eal~~GvP~v~~P~~~----DQ~~na~~v~~~~g~g~~l~~-~~~~~~l~~ai~~vl~~ 387 (428)
++ +|||||.||++|++++|+|+|++|... +|..||..+++ .|+|+.+.. ..+.+.|.++|.+++.+
T Consensus 74 Dl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~-~g~~~~~~~~~~~~~~L~~~i~~l~~~ 144 (167)
T PF04101_consen 74 DL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK-KGAAIMLDESELNPEELAEAIEELLSD 144 (167)
T ss_dssp SE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH-CCCCCCSECCC-SCCCHHHHHHCHCCC
T ss_pred CE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH-cCCccccCcccCCHHHHHHHHHHHHcC
Confidence 99 999999999999999999999999998 99999999988 599999875 67799999999999988
No 36
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.42 E-value=1.2e-10 Score=103.06 Aligned_cols=133 Identities=17% Similarity=0.197 Sum_probs=100.0
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHh-CCCC--eEEEEcCCCCCCCccccCCchhHHH----hhC--CCceEEeecC
Q 014232 240 PNSVLYVSLGSIVSMDKKELKEMAWGLYN-SKQP--FLWVLRPSSTSASSGIELLPEGFEE----AVG--ENGCVVKWAP 310 (428)
Q Consensus 240 ~~~vv~vsfGS~~~~~~~~~~~~~~al~~-~~~~--~iw~~~~~~~~~~~~~~~~p~~~~~----~~~--~~~~v~~~~p 310 (428)
++--|+||-|--.. ..+++...++|-.. .+.+ .+.++|+. .|....+ ..+ +++.+..|-.
T Consensus 218 E~~~Ilvs~GGG~d-G~eLi~~~l~A~~~l~~l~~~~~ivtGP~----------MP~~~r~~l~~~A~~~p~i~I~~f~~ 286 (400)
T COG4671 218 EGFDILVSVGGGAD-GAELIETALAAAQLLAGLNHKWLIVTGPF----------MPEAQRQKLLASAPKRPHISIFEFRN 286 (400)
T ss_pred ccceEEEecCCChh-hHHHHHHHHHHhhhCCCCCcceEEEeCCC----------CCHHHHHHHHHhcccCCCeEEEEhhh
Confidence 34468888776543 56666666666544 3433 45555544 5654433 223 5677888877
Q ss_pred hH-hhhccCCcCceeeccccchhHHhhhcCCceecccccc---chhhhHHHHhhhheeEEEcC-CccCHHHHHHHHHHHh
Q 014232 311 QK-DVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFG---DQRVSARYVSHVWRIGLQLE-NDLEKGEVEKAVKQLM 385 (428)
Q Consensus 311 q~-~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~---DQ~~na~~v~~~~g~g~~l~-~~~~~~~l~~ai~~vl 385 (428)
+. .++.-++. +|+-||+|||.|-|.+|+|.+++|... +|-.-|.|+++ +|+--.+. ..+++..|+++++..+
T Consensus 287 ~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~-LGL~dvL~pe~lt~~~La~al~~~l 363 (400)
T COG4671 287 DFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEE-LGLVDVLLPENLTPQNLADALKAAL 363 (400)
T ss_pred hHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHh-cCcceeeCcccCChHHHHHHHHhcc
Confidence 65 68888888 999999999999999999999999854 89999999976 89876665 4899999999999888
Q ss_pred c
Q 014232 386 V 386 (428)
Q Consensus 386 ~ 386 (428)
.
T Consensus 364 ~ 364 (400)
T COG4671 364 A 364 (400)
T ss_pred c
Confidence 7
No 37
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.39 E-value=2.7e-11 Score=109.67 Aligned_cols=103 Identities=14% Similarity=0.108 Sum_probs=77.1
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhC--CCCeEEEEcCCCCCCCccccCCchhHHHh--hCCCceEEeecChH-hhhc
Q 014232 242 SVLYVSLGSIVSMDKKELKEMAWGLYNS--KQPFLWVLRPSSTSASSGIELLPEGFEEA--VGENGCVVKWAPQK-DVLS 316 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~v~~~~pq~-~iL~ 316 (428)
+.|+|+||..-.. .....+++++.+. +.++.+++|.+.. ..+.+.+. ...|+.+..++++. ++|.
T Consensus 171 ~~iLi~~GG~d~~--~~~~~~l~~l~~~~~~~~i~vv~G~~~~--------~~~~l~~~~~~~~~i~~~~~~~~m~~lm~ 240 (279)
T TIGR03590 171 RRVLVSFGGADPD--NLTLKLLSALAESQINISITLVTGSSNP--------NLDELKKFAKEYPNIILFIDVENMAELMN 240 (279)
T ss_pred CeEEEEeCCcCCc--CHHHHHHHHHhccccCceEEEEECCCCc--------CHHHHHHHHHhCCCEEEEeCHHHHHHHHH
Confidence 4699999965432 2445567777664 3567777775421 22333222 23577888999986 7999
Q ss_pred cCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHH
Q 014232 317 HIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARY 357 (428)
Q Consensus 317 ~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 357 (428)
.+++ +||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 241 ~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 241 EADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 9999 999999 9999999999999999999999999875
No 38
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.38 E-value=3.1e-11 Score=114.61 Aligned_cols=171 Identities=13% Similarity=0.008 Sum_probs=110.0
Q ss_pred CCCcEEEEEecccccCCHHHHHHHHHHHHhC-----CCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeec-ChH
Q 014232 239 APNSVLYVSLGSIVSMDKKELKEMAWGLYNS-----KQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWA-PQK 312 (428)
Q Consensus 239 ~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~-----~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~-pq~ 312 (428)
+++++|.+--||....-......++++++.. +.++++...... .. +.+ +.+.+....+..+..+. ...
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~----~~~-~~~~~~~~~~~~v~~~~~~~~ 262 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RR----LQF-EQIKAEYGPDLQLHLIDGDAR 262 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hH----HHH-HHHHHHhCCCCcEEEECchHH
Confidence 3456788878887652233445555554432 234555433221 00 000 11111222222232221 344
Q ss_pred hhhccCCcCceeeccccchhHHhhhcCCceecc----cccc---------chhhhHHHHhhhheeEEEcC-CccCHHHHH
Q 014232 313 DVLSHIAVGGFWSHCGWNSTLESICEGVPMICR----PGFG---------DQRVSARYVSHVWRIGLQLE-NDLEKGEVE 378 (428)
Q Consensus 313 ~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~----P~~~---------DQ~~na~~v~~~~g~g~~l~-~~~~~~~l~ 378 (428)
++|..+++ +|+-+|..|+ |++.+|+|+|++ |+.. +|..|+..+.. .++...+. ...|++.|.
T Consensus 263 ~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~-~~~~pel~q~~~~~~~l~ 338 (385)
T TIGR00215 263 KAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILAN-RLLVPELLQEECTPHPLA 338 (385)
T ss_pred HHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcC-CccchhhcCCCCCHHHHH
Confidence 69999999 9999999888 999999999999 7742 27789998977 48887776 489999999
Q ss_pred HHHHHHhcCc----h-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 014232 379 KAVKQLMVEK----E-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLE 423 (428)
Q Consensus 379 ~ai~~vl~~~----~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 423 (428)
+.+.+++.|. + .+.+++..+++++.+. ++|.+.++++.+++
T Consensus 339 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~a~~i~~ 384 (385)
T TIGR00215 339 IALLLLLENGLKAYKEMHRERQFFEELRQRIY----CNADSERAAQAVLE 384 (385)
T ss_pred HHHHHHhcCCcccHHHHHHHHHHHHHHHHHhc----CCCHHHHHHHHHhh
Confidence 9999999984 3 4455566666665553 77888888877765
No 39
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.38 E-value=5.3e-10 Score=106.30 Aligned_cols=343 Identities=15% Similarity=0.115 Sum_probs=182.0
Q ss_pred HHHHHHHHh--CCCeEE---EEeCCCCCCC-CCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHH-hhchhHH--HHHH
Q 014232 2 LQLGTILYS--KGFSIT---VVHTDFNSPN-PSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNA-NCGAPFH--KCLV 72 (428)
Q Consensus 2 l~La~~L~~--rGh~Vt---~~~~~~~~~~-~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~--~~l~ 72 (428)
+++|++|.+ .|++|. ++++....+. .....| .+..+| .+.-........+..... .....+. .+++
T Consensus 14 ~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~~ip~~g-~~~~~~----sgg~~~~~~~~~~~~~~~gl~~~~~~~~~~~~ 88 (396)
T TIGR03492 14 ARIAKALLQLSPDLNLEALPLVGEGRAYQNLGIPIIG-PTKELP----SGGFSYQSLRGLLRDLRAGLVGLTLGQWRALR 88 (396)
T ss_pred HHHHHHHHhhCCCCCeEEeCcccCCHHHhhCCCceeC-CCCCCC----CCCccCCCHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 579999998 699999 9887743321 111113 333333 333333344444433333 2222222 2334
Q ss_pred HHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccHHHHHHHHhHhhhhhcCCCCCCCCCCCCCCCCCCCCCC
Q 014232 73 QMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSAATQISRIALLQLKEDGSIPLQDPSNLADPVPRLQPLR 152 (428)
Q Consensus 73 ~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 152 (428)
++. . ++|+||.=.-+. ...+|...|+|++++.+.-. .+. +. ..++. +. .+++.+.++....
T Consensus 89 ~~~-----~-~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~es----n~~--~~-~~~~~-~~---~~~~~~~~G~~~~- 149 (396)
T TIGR03492 89 KWA-----K-KGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKS----DYY--WE-SGPRR-SP---SDEYHRLEGSLYL- 149 (396)
T ss_pred HHh-----h-cCCEEEEECcHH-HHHHHHHcCCCceEEEeecc----cee--ec-CCCCC-cc---chhhhccCCCccC-
Confidence 442 2 789998554334 77888999999999776621 110 00 00111 11 1122222332100
Q ss_pred CCCCCCCcCCCChHHHHHHHhhhccCCccEEEEcCchhhhHHHHHHHHhhCCCCcceec-cCCCCCCCCCCCCccccchh
Q 014232 153 FKDLPFSQFGLPENFLQLIPKIYNVRTSKAVIWNTMNCIEQSSLSQLQQQCNIPIFPVG-PLHKFAPSSPGSLLKEDTSC 231 (428)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~l~~~~~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~ 231 (428)
.+ + ...-..+.++.+++... .... ++++ .+.++.++| |+...-.. ...
T Consensus 150 -------------p~-e--~n~l~~~~a~~v~~~~~--~t~~---~l~~-~g~k~~~vGnPv~d~l~~-------~~~-- 198 (396)
T TIGR03492 150 -------------PW-E--RWLMRSRRCLAVFVRDR--LTAR---DLRR-QGVRASYLGNPMMDGLEP-------PER-- 198 (396)
T ss_pred -------------HH-H--HHHhhchhhCEEeCCCH--HHHH---HHHH-CCCeEEEeCcCHHhcCcc-------ccc--
Confidence 00 0 00011244556655442 2222 2333 245799999 55443221 000
Q ss_pred hhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhC----CCCeEEEEcCCCCCCCccccCCchhHHHhhC-------
Q 014232 232 ISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNS----KQPFLWVLRPSSTSASSGIELLPEGFEEAVG------- 300 (428)
Q Consensus 232 ~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~----~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~------- 300 (428)
.. ++ +++++|.+--||....-...+..++++++.+ +..|++.+.++.. .+.+.+...
T Consensus 199 ~~-l~--~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~---------~~~~~~~l~~~g~~~~ 266 (396)
T TIGR03492 199 KP-LL--TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLS---------LEKLQAILEDLGWQLE 266 (396)
T ss_pred cc-cC--CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCC---------HHHHHHHHHhcCceec
Confidence 01 12 2345788888998653333344555555553 4677777643211 011111110
Q ss_pred ------------CCceEEeec-ChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhh---hee
Q 014232 301 ------------ENGCVVKWA-PQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHV---WRI 364 (428)
Q Consensus 301 ------------~~~~v~~~~-pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~---~g~ 364 (428)
.+..+..+. .-.+++..+++ +|+-+|..| .|+...|+|+|++|.-..|. |+...++. .|.
T Consensus 267 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~ 342 (396)
T TIGR03492 267 GSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGG 342 (396)
T ss_pred CCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCC
Confidence 123444444 34579999999 999999766 99999999999999877776 98766431 166
Q ss_pred EEEcCCccCHHHHHHHHHHHhcCchhHHHHHHHH-HHHHHHHHHHhcCCChHHHHHHHHH
Q 014232 365 GLQLENDLEKGEVEKAVKQLMVEKEGQEMRQRAK-NLKEDVELCIKESGSSSSSLNKFLE 423 (428)
Q Consensus 365 g~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~-~l~~~~~~~~~~~g~~~~~~~~~~~ 423 (428)
++.+.. .+.+.|.+++.++++| ++.+++.. ..++.+. +++.+.+.++.+.+
T Consensus 343 ~~~l~~-~~~~~l~~~l~~ll~d---~~~~~~~~~~~~~~lg----~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 343 SVFLAS-KNPEQAAQVVRQLLAD---PELLERCRRNGQERMG----PPGASARIAESILK 394 (396)
T ss_pred EEecCC-CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHhcC----CCCHHHHHHHHHHH
Confidence 666653 4559999999999998 55443333 2333332 45556666555544
No 40
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.29 E-value=1.2e-09 Score=104.14 Aligned_cols=112 Identities=14% Similarity=0.162 Sum_probs=82.6
Q ss_pred CCceEEeecChH-hhhccCCcCceeeccccchhHHhhhcCCceeccccccchh-hhHHHHhhhheeEEEcCCccCHHHHH
Q 014232 301 ENGCVVKWAPQK-DVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQR-VSARYVSHVWRIGLQLENDLEKGEVE 378 (428)
Q Consensus 301 ~~~~v~~~~pq~-~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~-~na~~v~~~~g~g~~l~~~~~~~~l~ 378 (428)
.++.+.+|+++. +++..+++ +|+.+|-+|+.||+++|+|+|+.+....|. .|+..+.+ .|.|+.+ -++++|.
T Consensus 265 ~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~-~g~g~~~---~~~~~la 338 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVD-NGFGAFS---ESPKEIA 338 (382)
T ss_pred CCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHh-CCceeec---CCHHHHH
Confidence 456788999865 69999999 999999999999999999999998776775 68888876 4999865 4789999
Q ss_pred HHHHHHhcC-ch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 379 KAVKQLMVE-KE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 379 ~ai~~vl~~-~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
++|.+++.+ ++ .+++++++++.. ...++...++.+.+.+.
T Consensus 339 ~~i~~ll~~~~~~~~~m~~~~~~~~--------~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 339 RIVAEWFGDKSDELEAMSENALKLA--------RPEAVFDIVHDLHELVR 380 (382)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhc--------CCchHHHHHHHHHHHhh
Confidence 999999986 22 233333333321 33445555555555443
No 41
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.28 E-value=1.9e-08 Score=94.99 Aligned_cols=157 Identities=18% Similarity=0.222 Sum_probs=94.9
Q ss_pred cEEEEEeccccc-CCHHHHHHHHHHHHhC-CCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHh---hhc
Q 014232 242 SVLYVSLGSIVS-MDKKELKEMAWGLYNS-KQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKD---VLS 316 (428)
Q Consensus 242 ~vv~vsfGS~~~-~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~---iL~ 316 (428)
..+++..|+... ...+.+..++..+... +.++++ +|.+. ..+.+. ...+|+.+.+|+++.+ ++.
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i-~G~~~---------~~~~~~-~~~~~v~~~g~~~~~~~~~~~~ 265 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVI-VGDGP---------ARARLE-ARYPNVHFLGFLDGEELAAAYA 265 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEE-EeCCc---------hHHHHh-ccCCcEEEEeccCHHHHHHHHH
Confidence 457777887654 2333333333333322 344444 34321 011111 2346778899999876 788
Q ss_pred cCCcCceeecccc----chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCch-hH
Q 014232 317 HIAVGGFWSHCGW----NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKE-GQ 391 (428)
Q Consensus 317 ~~~~~~~itHgG~----~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~-~~ 391 (428)
.+++ +|.++.. ++++||+++|+|+|+.+..+ +...+.+ .+.|...+. -+.+++.+++.+++.+++ ..
T Consensus 266 ~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~-~~~g~~~~~-~~~~~l~~~i~~l~~~~~~~~ 337 (364)
T cd03814 266 SADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTD-GENGLLVEP-GDAEAFAAALAALLADPELRR 337 (364)
T ss_pred hCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcC-CcceEEcCC-CCHHHHHHHHHHHHcCHHHHH
Confidence 9998 8877643 78999999999999887554 4455544 478887763 577889999999999832 22
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 014232 392 EMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFF 425 (428)
Q Consensus 392 ~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 425 (428)
++.+++++.. +.-+....++++++.+
T Consensus 338 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 338 RMAARARAEA--------ERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHHH--------hhcCHHHHHHHHHHhh
Confidence 3333333322 2344555566665543
No 42
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.26 E-value=7.9e-10 Score=105.62 Aligned_cols=163 Identities=16% Similarity=0.190 Sum_probs=108.0
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHH-Hh-CCCCeEEEEcCCCCCCCccccCCchhHHHh--hCCCceEEeecChH-hh
Q 014232 240 PNSVLYVSLGSIVSMDKKELKEMAWGL-YN-SKQPFLWVLRPSSTSASSGIELLPEGFEEA--VGENGCVVKWAPQK-DV 314 (428)
Q Consensus 240 ~~~vv~vsfGS~~~~~~~~~~~~~~al-~~-~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~v~~~~pq~-~i 314 (428)
++++|++..|+... ...+..+++++ +. .+.+++++.+.+. .+-+.+.+. ..+++.+.+|+++. ++
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~--------~l~~~l~~~~~~~~~v~~~G~~~~~~~~ 270 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK--------ELKRSLTAKFKSNENVLILGYTKHMNEW 270 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH--------HHHHHHHHHhccCCCeEEEeccchHHHH
Confidence 45688888888763 12344445553 32 2356666544321 011222222 13467788999765 68
Q ss_pred hccCCcCceeeccccchhHHhhhcCCceecc-ccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCch-hHH
Q 014232 315 LSHIAVGGFWSHCGWNSTLESICEGVPMICR-PGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKE-GQE 392 (428)
Q Consensus 315 L~~~~~~~~itHgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~-~~~ 392 (428)
+..+++ +||..|-.|+.||+++|+|+|+. |..+.|..|+..+.+ .|+|+... +.+++.++|.++++|++ ..+
T Consensus 271 ~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~-~G~g~~~~---~~~~l~~~i~~ll~~~~~~~~ 344 (391)
T PRK13608 271 MASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEE-KGFGKIAD---TPEEAIKIVASLTNGNEQLTN 344 (391)
T ss_pred HHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh-CCcEEEeC---CHHHHHHHHHHHhcCHHHHHH
Confidence 999999 99988888999999999999998 776777899999977 59998754 78899999999998833 334
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 393 MRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 393 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
|+++++++. +..+....++.+++.+.
T Consensus 345 m~~~~~~~~--------~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 345 MISTMEQDK--------IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHHhc--------CCCCHHHHHHHHHHHhh
Confidence 444444432 23445555555555443
No 43
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.14 E-value=9.8e-09 Score=98.06 Aligned_cols=106 Identities=12% Similarity=0.191 Sum_probs=68.8
Q ss_pred HhhhccCCcCceeeccccchhHHhhhcCCceeccccccchh--------hh-----HHHHhhhheeEEEcC-CccCHHHH
Q 014232 312 KDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQR--------VS-----ARYVSHVWRIGLQLE-NDLEKGEV 377 (428)
Q Consensus 312 ~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~--------~n-----a~~v~~~~g~g~~l~-~~~~~~~l 377 (428)
.+++..+++ +|+-+|.+++ |++.+|+|+|++|-..--+ .| +..+.+ .+++..+. ...+++.|
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l 331 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAG-RELVPELLQEEATPEKL 331 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcC-CCcchhhcCCCCCHHHH
Confidence 568999999 9999998887 9999999999985442222 11 122211 12233333 36789999
Q ss_pred HHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 378 EKAVKQLMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 378 ~~ai~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
.+++.++++|++ .++++++++++.+.+ ..|.+.+.++.+.+.+.
T Consensus 332 ~~~i~~ll~~~~~~~~~~~~~~~~~~~~-----~~~a~~~~~~~i~~~~~ 376 (380)
T PRK00025 332 ARALLPLLADGARRQALLEGFTELHQQL-----RCGADERAAQAVLELLK 376 (380)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHHhh
Confidence 999999999943 344555554444433 34566666666665543
No 44
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.13 E-value=2.1e-08 Score=95.72 Aligned_cols=132 Identities=17% Similarity=0.226 Sum_probs=94.7
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHhC-CCCeEEEEcCCCCCCCccccCCchhHHH---hhCCCceEEeecChH-hh
Q 014232 240 PNSVLYVSLGSIVSMDKKELKEMAWGLYNS-KQPFLWVLRPSSTSASSGIELLPEGFEE---AVGENGCVVKWAPQK-DV 314 (428)
Q Consensus 240 ~~~vv~vsfGS~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~p~~~~~---~~~~~~~v~~~~pq~-~i 314 (428)
++++|++.-|+.... ..+..+++++.+. +.+++++.+.+.. +-+.+.+ ..++|+.+.+|+++. ++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~~--------~~~~l~~~~~~~~~~v~~~g~~~~~~~l 270 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNEA--------LKQSLEDLQETNPDALKVFGYVENIDEL 270 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCHH--------HHHHHHHHHhcCCCcEEEEechhhHHHH
Confidence 345777777776532 2245567777654 4566666553210 1122221 223578889999875 79
Q ss_pred hccCCcCceeeccccchhHHhhhcCCceecc-ccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 315 LSHIAVGGFWSHCGWNSTLESICEGVPMICR-PGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 315 L~~~~~~~~itHgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
+..+++ +|+..|..|+.||+++|+|+|+. |..+.|..|+..+.+ .|+|+.. -+.+++.++|.++++|
T Consensus 271 ~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-~G~~~~~---~~~~~l~~~i~~ll~~ 338 (380)
T PRK13609 271 FRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-KGAAVVI---RDDEEVFAKTEALLQD 338 (380)
T ss_pred HHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh-CCcEEEE---CCHHHHHHHHHHHHCC
Confidence 999999 99999988999999999999984 777778889988866 5888764 3678999999999998
No 45
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.09 E-value=2.3e-07 Score=91.00 Aligned_cols=140 Identities=15% Similarity=0.189 Sum_probs=87.6
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhC-CCCeEEEEcCCCCCCCccccCCchhHHHhh-CCCceEEeecChHh---hhc
Q 014232 242 SVLYVSLGSIVSMDKKELKEMAWGLYNS-KQPFLWVLRPSSTSASSGIELLPEGFEEAV-GENGCVVKWAPQKD---VLS 316 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~v~~~~pq~~---iL~ 316 (428)
..+++..|++.. ...+..++++++.. +.++++ +|.+. ..+.+.+.. ..++.+.+++|+.+ ++.
T Consensus 263 ~~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~i-vG~G~---------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~ 330 (465)
T PLN02871 263 KPLIVYVGRLGA--EKNLDFLKRVMERLPGARLAF-VGDGP---------YREELEKMFAGTPTVFTGMLQGDELSQAYA 330 (465)
T ss_pred CeEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEE-EeCCh---------HHHHHHHHhccCCeEEeccCCHHHHHHHHH
Confidence 345666687653 33356677787775 345554 34321 112332222 24678889998765 788
Q ss_pred cCCcCceeeccc----cchhHHhhhcCCceeccccccchhhhHHHHhh--hheeEEEcCCccCHHHHHHHHHHHhcCch-
Q 014232 317 HIAVGGFWSHCG----WNSTLESICEGVPMICRPGFGDQRVSARYVSH--VWRIGLQLENDLEKGEVEKAVKQLMVEKE- 389 (428)
Q Consensus 317 ~~~~~~~itHgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~--~~g~g~~l~~~~~~~~l~~ai~~vl~~~~- 389 (428)
.+++ ||.-.. -++++||+++|+|+|+....+ ....+.+ .-+.|..++. -+.+++.++|.++++|++
T Consensus 331 ~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~~-~d~~~la~~i~~ll~~~~~ 403 (465)
T PLN02871 331 SGDV--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYTP-GDVDDCVEKLETLLADPEL 403 (465)
T ss_pred HCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeCC-CCHHHHHHHHHHHHhCHHH
Confidence 8998 885443 246899999999999876432 2223322 1367877763 578999999999998843
Q ss_pred hHHHHHHHHHH
Q 014232 390 GQEMRQRAKNL 400 (428)
Q Consensus 390 ~~~~~~~a~~l 400 (428)
..++.+++++.
T Consensus 404 ~~~~~~~a~~~ 414 (465)
T PLN02871 404 RERMGAAAREE 414 (465)
T ss_pred HHHHHHHHHHH
Confidence 34455555543
No 46
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.08 E-value=4.7e-07 Score=86.97 Aligned_cols=91 Identities=15% Similarity=0.162 Sum_probs=63.5
Q ss_pred CCceEEeecChHh---hhccCCcCceee---cccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccC
Q 014232 301 ENGCVVKWAPQKD---VLSHIAVGGFWS---HCGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLE 373 (428)
Q Consensus 301 ~~~~v~~~~pq~~---iL~~~~~~~~it---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~ 373 (428)
+++.+.+++|+.+ +|..+++ +|. +.|. .+++||+++|+|+|+.. .......+.. -..|..++. -+
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv--~v~~s~~e~~~~~llEAmA~G~PVIas~----~~g~~e~i~~-~~~G~lv~~-~d 352 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDV--HVYLTYPFVLSWSLLEAMACGCLVVGSD----TAPVREVITD-GENGLLVDF-FD 352 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcE--EEEcCcccccchHHHHHHHCCCCEEEcC----CCCchhhccc-CCceEEcCC-CC
Confidence 5778889999875 6678888 653 2333 48999999999999864 3344455543 246776663 57
Q ss_pred HHHHHHHHHHHhcCch-hHHHHHHHHH
Q 014232 374 KGEVEKAVKQLMVEKE-GQEMRQRAKN 399 (428)
Q Consensus 374 ~~~l~~ai~~vl~~~~-~~~~~~~a~~ 399 (428)
.+++.++|.++++|.+ ..++.+++++
T Consensus 353 ~~~la~~i~~ll~~~~~~~~l~~~ar~ 379 (396)
T cd03818 353 PDALAAAVIELLDDPARRARLRRAARR 379 (396)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 9999999999999843 3344444444
No 47
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.04 E-value=5.3e-07 Score=86.93 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=65.3
Q ss_pred CCceEEeecChHh---hhccCCcCceee---cccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccC
Q 014232 301 ENGCVVKWAPQKD---VLSHIAVGGFWS---HCGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLE 373 (428)
Q Consensus 301 ~~~~v~~~~pq~~---iL~~~~~~~~it---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~ 373 (428)
+++.+.+++|+.+ +|..+++ ||. +-|+ .+++||+++|+|+|+.... .....+.+ -..|..++. -+
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~~-~d 354 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAVAD-GETGLLVDG-HD 354 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhhcc-CCceEECCC-CC
Confidence 5788889998764 7889998 764 2344 5899999999999986543 33344544 357777763 57
Q ss_pred HHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 014232 374 KGEVEKAVKQLMVEKE-GQEMRQRAKNL 400 (428)
Q Consensus 374 ~~~l~~ai~~vl~~~~-~~~~~~~a~~l 400 (428)
.++++++|.+++++.+ ..++++++++.
T Consensus 355 ~~~la~~i~~~l~~~~~~~~~~~~~~~~ 382 (405)
T TIGR03449 355 PADWADALARLLDDPRTRIRMGAAAVEH 382 (405)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 8999999999998843 34455555543
No 48
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.04 E-value=8.6e-07 Score=83.41 Aligned_cols=130 Identities=15% Similarity=0.132 Sum_probs=80.5
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHhC---CCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHh---h
Q 014232 241 NSVLYVSLGSIVSMDKKELKEMAWGLYNS---KQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKD---V 314 (428)
Q Consensus 241 ~~vv~vsfGS~~~~~~~~~~~~~~al~~~---~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~---i 314 (428)
+..+++.+|++... .....+++++... +.++++ +|...... ..........++.+.+|+++.+ +
T Consensus 190 ~~~~i~~~G~~~~~--k~~~~li~~~~~l~~~~~~l~i-~G~~~~~~-------~~~~~~~~~~~v~~~g~~~~~~~~~~ 259 (359)
T cd03823 190 GRLRFGFIGQLTPH--KGVDLLLEAFKRLPRGDIELVI-VGNGLELE-------EESYELEGDPRVEFLGAYPQEEIDDF 259 (359)
T ss_pred CceEEEEEecCccc--cCHHHHHHHHHHHHhcCcEEEE-EcCchhhh-------HHHHhhcCCCeEEEeCCCCHHHHHHH
Confidence 44677778887641 2233344444443 455544 34321100 0000012246778889998775 5
Q ss_pred hccCCcCceee----cccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCc
Q 014232 315 LSHIAVGGFWS----HCGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEK 388 (428)
Q Consensus 315 L~~~~~~~~it----HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~ 388 (428)
+..+++ +|. ..|+ .++.||+++|+|+|+.+.. .+...+.+ .+.|..++. -+.+++.+++.++++++
T Consensus 260 ~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~~-~d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 260 YAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRD-GVNGLLFPP-GDAEDLAAALERLIDDP 330 (359)
T ss_pred HHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcC-CCcEEEECC-CCHHHHHHHHHHHHhCh
Confidence 888888 773 2344 4799999999999987543 34555544 357877764 46899999999999973
No 49
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.02 E-value=1.8e-07 Score=88.90 Aligned_cols=142 Identities=18% Similarity=0.175 Sum_probs=85.4
Q ss_pred CcEEEEEeccccc-CCHHHHHHHHHHHHhC-CCCeEEEEcCCCCCCCccccCCchhHHH----hhCCCceEEeecChHh-
Q 014232 241 NSVLYVSLGSIVS-MDKKELKEMAWGLYNS-KQPFLWVLRPSSTSASSGIELLPEGFEE----AVGENGCVVKWAPQKD- 313 (428)
Q Consensus 241 ~~vv~vsfGS~~~-~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~p~~~~~----~~~~~~~v~~~~pq~~- 313 (428)
++.+++..|+... ...+.+...+..+... +.++++ ++.+. ..+.+.+ ...+|+.+.+++++.+
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~---------~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 288 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGP---------EKEELKELAKALGLDNVTFLGRVPKEEL 288 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCcc---------cHHHHHHHHHHcCCCcEEEeCCCChHHH
Confidence 4567777888765 2333333333333333 344443 34321 1122221 2236788889998775
Q ss_pred --hhccCCcCceeeccc---------cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHH
Q 014232 314 --VLSHIAVGGFWSHCG---------WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVK 382 (428)
Q Consensus 314 --iL~~~~~~~~itHgG---------~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~ 382 (428)
++..+++ +|.... -+++.||+++|+|+|+.+..+.+.. +.+ .+.|..++. -+.+++.++|.
T Consensus 289 ~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~-~~~g~~~~~-~~~~~l~~~i~ 360 (394)
T cd03794 289 PELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEE-AGAGLVVPP-GDPEALAAAIL 360 (394)
T ss_pred HHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hcc-CCcceEeCC-CCHHHHHHHHH
Confidence 6788888 664333 2347999999999999877665443 223 256766663 47899999999
Q ss_pred HHhcCch-hHHHHHHHHHH
Q 014232 383 QLMVEKE-GQEMRQRAKNL 400 (428)
Q Consensus 383 ~vl~~~~-~~~~~~~a~~l 400 (428)
++++|++ ..++++++++.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~ 379 (394)
T cd03794 361 ELLDDPEERAEMGENGRRY 379 (394)
T ss_pred HHHhChHHHHHHHHHHHHH
Confidence 9998743 33444444443
No 50
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.00 E-value=1.9e-06 Score=82.70 Aligned_cols=90 Identities=14% Similarity=0.215 Sum_probs=64.6
Q ss_pred CCceEEeecChHh---hhccCCcCceeecc---c-cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccC
Q 014232 301 ENGCVVKWAPQKD---VLSHIAVGGFWSHC---G-WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLE 373 (428)
Q Consensus 301 ~~~~v~~~~pq~~---iL~~~~~~~~itHg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~ 373 (428)
+|+.+.+|+|+.+ ++..+++ ++... | -.+++||+++|+|+|+.+..+ ....+.+ .+.|..++. -+
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~-~~~g~~~~~-~~ 354 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVD-GVTGLLVDP-RD 354 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccC-CCCeEEeCC-CC
Confidence 5778899999876 5888888 77542 2 358999999999999876443 4445544 368887763 47
Q ss_pred HHHHHHHHHHHhcCch-hHHHHHHHH
Q 014232 374 KGEVEKAVKQLMVEKE-GQEMRQRAK 398 (428)
Q Consensus 374 ~~~l~~ai~~vl~~~~-~~~~~~~a~ 398 (428)
.+++.++|.+++.+++ ...+.++++
T Consensus 355 ~~~l~~~i~~l~~~~~~~~~~~~~a~ 380 (398)
T cd03800 355 PEALAAALRRLLTDPALRRRLSRAGL 380 (398)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 8999999999998832 233444443
No 51
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.99 E-value=1.7e-06 Score=81.81 Aligned_cols=95 Identities=14% Similarity=0.224 Sum_probs=65.6
Q ss_pred CCCceEEeecChHh---hhccCCcCceeecc----ccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCcc
Q 014232 300 GENGCVVKWAPQKD---VLSHIAVGGFWSHC----GWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDL 372 (428)
Q Consensus 300 ~~~~~v~~~~pq~~---iL~~~~~~~~itHg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 372 (428)
.+|+.+.+++|+.+ ++.++++ +|..+ .-+++.||+++|+|+|+.+. ...+..+.+ .+.|..++. -
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~-~~~g~~~~~-~ 329 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVAD-GENGFLFPP-G 329 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheec-CceeEEeCC-C
Confidence 36778889999875 6888888 66443 23689999999999998654 334555544 367877764 2
Q ss_pred CHHHHHHHHHHHhcCch-hHHHHHHHHHHHHH
Q 014232 373 EKGEVEKAVKQLMVEKE-GQEMRQRAKNLKED 403 (428)
Q Consensus 373 ~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~ 403 (428)
+. ++.+++.+++++.+ ...+.+++++..+.
T Consensus 330 ~~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 330 DE-ALAEALLRLLQDPELRRRLSKNAEESAEK 360 (374)
T ss_pred CH-HHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 22 89999999998843 33455555544443
No 52
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.98 E-value=2e-06 Score=83.10 Aligned_cols=162 Identities=14% Similarity=0.101 Sum_probs=95.0
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHhC----CCCeEEEEcCCCCCCCccccCCchhHHHh----hCCCceEEeecChH
Q 014232 241 NSVLYVSLGSIVSMDKKELKEMAWGLYNS----KQPFLWVLRPSSTSASSGIELLPEGFEEA----VGENGCVVKWAPQK 312 (428)
Q Consensus 241 ~~vv~vsfGS~~~~~~~~~~~~~~al~~~----~~~~iw~~~~~~~~~~~~~~~~p~~~~~~----~~~~~~v~~~~pq~ 312 (428)
+..+++..|++.. ..-+..+++|++.. +.++++ +|.+. ..+.+.+. .-+|+.+.+|+|+.
T Consensus 228 ~~~~i~~~G~l~~--~kg~~~li~a~~~l~~~~~~~l~i-vG~g~---------~~~~l~~~~~~~~l~~v~f~G~~~~~ 295 (412)
T PRK10307 228 GKKIVLYSGNIGE--KQGLELVIDAARRLRDRPDLIFVI-CGQGG---------GKARLEKMAQCRGLPNVHFLPLQPYD 295 (412)
T ss_pred CCEEEEEcCcccc--ccCHHHHHHHHHHhccCCCeEEEE-ECCCh---------hHHHHHHHHHHcCCCceEEeCCCCHH
Confidence 3456667788763 23344455665543 234433 34321 11222211 12477888999976
Q ss_pred h---hhccCCcCceeecccc------chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHH
Q 014232 313 D---VLSHIAVGGFWSHCGW------NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQ 383 (428)
Q Consensus 313 ~---iL~~~~~~~~itHgG~------~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~ 383 (428)
+ ++..+++..+.+..+. +.+.|++.+|+|+|+....+.. ....+ . +.|+.++. -+.++++++|.+
T Consensus 296 ~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~~-~d~~~la~~i~~ 369 (412)
T PRK10307 296 RLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVEP-ESVEALVAAIAA 369 (412)
T ss_pred HHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeCC-CCHHHHHHHHHH
Confidence 5 6888888444444332 2368999999999998654321 11222 2 56776663 578999999999
Q ss_pred HhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 384 LMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 384 vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
+++|++ ...+++++++..+ +.=+....++++++.+++
T Consensus 370 l~~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 370 LARQALLRPKLGTVAREYAE-------RTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHhCHHHHHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHHH
Confidence 998843 3455555554332 233456666666666654
No 53
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.91 E-value=1.4e-06 Score=84.04 Aligned_cols=91 Identities=15% Similarity=0.228 Sum_probs=64.7
Q ss_pred CCceEE-eecChHh---hhccCCcCceee-c-----cc-cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC
Q 014232 301 ENGCVV-KWAPQKD---VLSHIAVGGFWS-H-----CG-WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE 369 (428)
Q Consensus 301 ~~~~v~-~~~pq~~---iL~~~~~~~~it-H-----gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~ 369 (428)
+|+.+. +|+|..+ +|..+++ +|. + -| -++++||+++|+|+|+... ......+.+ -+.|+.++
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~-~~~G~lv~ 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKH-GENGLVFG 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcC-CCCEEEEC
Confidence 355544 6888765 5788998 663 1 12 3479999999999998643 344455544 36788774
Q ss_pred CccCHHHHHHHHHHHhcC---ch-hHHHHHHHHHHH
Q 014232 370 NDLEKGEVEKAVKQLMVE---KE-GQEMRQRAKNLK 401 (428)
Q Consensus 370 ~~~~~~~l~~ai~~vl~~---~~-~~~~~~~a~~l~ 401 (428)
+.++++++|.++++| ++ ...|++++++..
T Consensus 367 ---d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 ---DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred ---CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 789999999999988 44 567777777765
No 54
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.88 E-value=7.2e-07 Score=86.51 Aligned_cols=102 Identities=17% Similarity=0.230 Sum_probs=69.0
Q ss_pred hhhccCCcCceeec-----cccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 313 DVLSHIAVGGFWSH-----CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 313 ~iL~~~~~~~~itH-----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
.++..+++ ++.. +|-.+++||+++|+|+|+.|..+++......+.+ .|.++... +.++|.+++.++++|
T Consensus 315 ~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~-~g~~~~~~---d~~~La~~l~~ll~~ 388 (425)
T PRK05749 315 LLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQ-AGAAIQVE---DAEDLAKAVTYLLTD 388 (425)
T ss_pred HHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHH-CCCeEEEC---CHHHHHHHHHHHhcC
Confidence 57788887 5432 2334599999999999999998888888777755 37776643 688999999999998
Q ss_pred ch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 388 KE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 388 ~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
++ ..+|.+++++..+. ..|...+.++.+.+.+.
T Consensus 389 ~~~~~~m~~~a~~~~~~------~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 389 PDARQAYGEAGVAFLKQ------NQGALQRTLQLLEPYLP 422 (425)
T ss_pred HHHHHHHHHHHHHHHHh------CccHHHHHHHHHHHhcc
Confidence 43 34455555443322 23445555555555444
No 55
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.87 E-value=1.5e-06 Score=82.68 Aligned_cols=112 Identities=17% Similarity=0.197 Sum_probs=73.3
Q ss_pred CCceEEeecChH-hhhccCCcCceeec---cc-cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHH
Q 014232 301 ENGCVVKWAPQK-DVLSHIAVGGFWSH---CG-WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKG 375 (428)
Q Consensus 301 ~~~~v~~~~pq~-~iL~~~~~~~~itH---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~ 375 (428)
+++.+.++.++. +++..+++ +|.- .| -.++.||+.+|+|+|+... ......+.+ -..|..++. -+.+
T Consensus 253 ~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e~i~~-~~~G~~~~~-~~~~ 324 (371)
T cd04962 253 DDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNA----GGIPEVVKH-GETGFLVDV-GDVE 324 (371)
T ss_pred ceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchhhhcC-CCceEEcCC-CCHH
Confidence 467777877654 58888888 6632 23 3599999999999998644 344555544 256776653 5789
Q ss_pred HHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 376 EVEKAVKQLMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 376 ~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
++.+++.+++++++ ..++++++++.. . +.=+....++++.+.+++
T Consensus 325 ~l~~~i~~l~~~~~~~~~~~~~~~~~~---~----~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 325 AMAEYALSLLEDDELWQEFSRAARNRA---A----ERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHH---H----HhCCHHHHHHHHHHHHHh
Confidence 99999999998733 334555555441 1 233455566666666554
No 56
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.87 E-value=6.2e-06 Score=77.51 Aligned_cols=81 Identities=17% Similarity=0.238 Sum_probs=61.1
Q ss_pred CCCceEEeecChHh---hhccCCcCceee----ccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCcc
Q 014232 300 GENGCVVKWAPQKD---VLSHIAVGGFWS----HCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDL 372 (428)
Q Consensus 300 ~~~~~v~~~~pq~~---iL~~~~~~~~it----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 372 (428)
.+++.+.+++++.+ +|..+++ +|. -|.-++++||+++|+|+|+.+. ......+.+ -+.|..++. .
T Consensus 255 ~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~-~~~g~~~~~-~ 326 (374)
T cd03801 255 GDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVED-GETGLLVPP-G 326 (374)
T ss_pred CcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcC-CcceEEeCC-C
Confidence 46778889998654 7888888 663 2445789999999999998765 345555543 367777764 5
Q ss_pred CHHHHHHHHHHHhcCc
Q 014232 373 EKGEVEKAVKQLMVEK 388 (428)
Q Consensus 373 ~~~~l~~ai~~vl~~~ 388 (428)
+.+++.+++.++++++
T Consensus 327 ~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 327 DPEALAEAILRLLDDP 342 (374)
T ss_pred CHHHHHHHHHHHHcCh
Confidence 6899999999999883
No 57
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.84 E-value=4.9e-06 Score=86.24 Aligned_cols=94 Identities=20% Similarity=0.246 Sum_probs=62.6
Q ss_pred CCceEEeecChHh---hhccCC--cCceeec---ccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCc
Q 014232 301 ENGCVVKWAPQKD---VLSHIA--VGGFWSH---CGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEND 371 (428)
Q Consensus 301 ~~~~v~~~~pq~~---iL~~~~--~~~~itH---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 371 (428)
+++.+.+++++.+ ++..++ ...||.- =|+ .+++||+++|+|+|+....+ ....+.. -..|+.++.
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~-g~nGlLVdP- 621 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRV-LDNGLLVDP- 621 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhcc-CCcEEEECC-
Confidence 5677788888875 455552 1227764 344 58999999999999986543 2223322 246777763
Q ss_pred cCHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 014232 372 LEKGEVEKAVKQLMVEKE-GQEMRQRAKNL 400 (428)
Q Consensus 372 ~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l 400 (428)
-+.+.++++|.++++|++ ..+|.+++++.
T Consensus 622 ~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~ 651 (1050)
T TIGR02468 622 HDQQAIADALLKLVADKQLWAECRQNGLKN 651 (1050)
T ss_pred CCHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 678999999999999843 34455555443
No 58
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.82 E-value=3.6e-06 Score=78.52 Aligned_cols=93 Identities=16% Similarity=0.185 Sum_probs=61.8
Q ss_pred CCceEEeecC-hHhhhccCCcCceeeccc----cchhHHhhhcCCceeccccccchhhhHHHHhhhhe-eEEEcCCccCH
Q 014232 301 ENGCVVKWAP-QKDVLSHIAVGGFWSHCG----WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWR-IGLQLENDLEK 374 (428)
Q Consensus 301 ~~~~v~~~~p-q~~iL~~~~~~~~itHgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g-~g~~l~~~~~~ 374 (428)
.++.+.++.. -..++..+++ +|.-.. -++++||+++|+|+|+.+..+.+. .+... + .|..++. .+.
T Consensus 235 ~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~-~~~g~~~~~-~~~ 306 (348)
T cd03820 235 DRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIED-GVNGLLVPN-GDV 306 (348)
T ss_pred CeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhcc-CcceEEeCC-CCH
Confidence 4556666633 2358888888 776542 468999999999999875544332 23343 4 7777763 577
Q ss_pred HHHHHHHHHHhcCch-hHHHHHHHHHHH
Q 014232 375 GEVEKAVKQLMVEKE-GQEMRQRAKNLK 401 (428)
Q Consensus 375 ~~l~~ai~~vl~~~~-~~~~~~~a~~l~ 401 (428)
+++.++|.++++|++ ...++++++...
T Consensus 307 ~~~~~~i~~ll~~~~~~~~~~~~~~~~~ 334 (348)
T cd03820 307 EALAEALLRLMEDEELRKRMGANARESA 334 (348)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 999999999999833 334444444433
No 59
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.80 E-value=1.2e-05 Score=78.24 Aligned_cols=111 Identities=15% Similarity=0.212 Sum_probs=69.8
Q ss_pred CCCceEEeecChHhh---hccC----CcCceeecc---cc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEc
Q 014232 300 GENGCVVKWAPQKDV---LSHI----AVGGFWSHC---GW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQL 368 (428)
Q Consensus 300 ~~~~~v~~~~pq~~i---L~~~----~~~~~itHg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l 368 (428)
.+++.+.+++++.++ +..+ ++ ||... |+ .+++||+++|+|+|+.... .....+.+ -..|+.+
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv~~-~~~G~lv 388 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDIIAN-CRNGLLV 388 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHhcC-CCcEEEe
Confidence 356777788887764 5544 56 88654 43 5999999999999987543 34444433 2467776
Q ss_pred CCccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 014232 369 ENDLEKGEVEKAVKQLMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFF 425 (428)
Q Consensus 369 ~~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 425 (428)
+. -+.++++++|.++++|++ ..++.+++++ .+.+.=+-...++++.+.+
T Consensus 389 ~~-~d~~~la~~i~~ll~~~~~~~~~~~~a~~-------~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 389 DV-LDLEAIASALEDALSDSSQWQLWSRNGIE-------GVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred CC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHH-------HHHHhCCHHHHHHHHHHHh
Confidence 63 578999999999999832 2233333332 2223334455555555443
No 60
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.80 E-value=1.4e-05 Score=75.36 Aligned_cols=113 Identities=14% Similarity=0.146 Sum_probs=73.1
Q ss_pred CCCceEEeecChH---hhhccCCcCceeec----cccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCcc
Q 014232 300 GENGCVVKWAPQK---DVLSHIAVGGFWSH----CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDL 372 (428)
Q Consensus 300 ~~~~~v~~~~pq~---~iL~~~~~~~~itH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 372 (428)
.+|+.+.+++++. .++..+++ +|.. |.-++++||+++|+|+|+.+.. .....+.+ .+.|...+. -
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~~~-~~~g~~~~~-~ 329 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEIITD-GENGLLVPP-G 329 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHhcC-CcceeEECC-C
Confidence 3577888999976 46788888 6522 4457899999999999986543 33445544 356776663 6
Q ss_pred CHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhcC
Q 014232 373 EKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNLF 428 (428)
Q Consensus 373 ~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 428 (428)
+.+++.+++.+++++ +.. +..++.++.+. +.=+-...++++.+.++++
T Consensus 330 ~~~~l~~~i~~~~~~---~~~-~~~~~~~~~~~----~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 330 DPEALAEAILRLLAD---PWL-RLGRAARRRVA----ERFSWENVAERLLELYREV 377 (377)
T ss_pred CHHHHHHHHHHHhcC---cHH-HHhHHHHHHHH----HHhhHHHHHHHHHHHHhhC
Confidence 889999999999998 332 12222222222 2233555666777666553
No 61
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.80 E-value=2e-05 Score=73.85 Aligned_cols=145 Identities=17% Similarity=0.167 Sum_probs=83.1
Q ss_pred CcEEEEEeccccc-CCHHHHHHHHHHHHh--CCCCeEEEEcCCCCCCCccccCCchh-HHH-hhCCCceEEeecChH-hh
Q 014232 241 NSVLYVSLGSIVS-MDKKELKEMAWGLYN--SKQPFLWVLRPSSTSASSGIELLPEG-FEE-AVGENGCVVKWAPQK-DV 314 (428)
Q Consensus 241 ~~vv~vsfGS~~~-~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~~~~p~~-~~~-~~~~~~~v~~~~pq~-~i 314 (428)
++++++..|++.. ...+.+-..+..+.+ .+.++++ ++...... . .... +.+ ....++.+.++..+. .+
T Consensus 187 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i-~G~~~~~~-~----~~~~~~~~~~~~~~v~~~g~~~~~~~~ 260 (359)
T cd03808 187 DDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLL-VGDGDEEN-P----AAILEIEKLGLEGRVEFLGFRDDVPEL 260 (359)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEE-EcCCCcch-h----hHHHHHHhcCCcceEEEeeccccHHHH
Confidence 4578888888765 233333333444433 2334443 34321110 0 0000 111 123466677764433 58
Q ss_pred hccCCcCceeeccc----cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCch-
Q 014232 315 LSHIAVGGFWSHCG----WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKE- 389 (428)
Q Consensus 315 L~~~~~~~~itHgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~- 389 (428)
+..+++ +|.... -++++||+.+|+|+|+.+..+ +...+.+ .+.|..++. -+.+++.++|.+++.+++
T Consensus 261 ~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~-~~~g~~~~~-~~~~~~~~~i~~l~~~~~~ 332 (359)
T cd03808 261 LAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVID-GVNGFLVPP-GDAEALADAIERLIEDPEL 332 (359)
T ss_pred HHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhc-CcceEEECC-CCHHHHHHHHHHHHhCHHH
Confidence 889988 776443 478999999999999865443 3444543 367777663 478999999999998843
Q ss_pred hHHHHHHHHH
Q 014232 390 GQEMRQRAKN 399 (428)
Q Consensus 390 ~~~~~~~a~~ 399 (428)
..++.+++++
T Consensus 333 ~~~~~~~~~~ 342 (359)
T cd03808 333 RARMGQAARK 342 (359)
T ss_pred HHHHHHHHHH
Confidence 2334444433
No 62
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.79 E-value=7.2e-06 Score=77.33 Aligned_cols=143 Identities=17% Similarity=0.186 Sum_probs=89.8
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCC-CCeEEEEcCCCCCCCccccCCchhHHH-----hhCCCceEEeecChHh--
Q 014232 242 SVLYVSLGSIVSMDKKELKEMAWGLYNSK-QPFLWVLRPSSTSASSGIELLPEGFEE-----AVGENGCVVKWAPQKD-- 313 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~v~~~~pq~~-- 313 (428)
..+++..|++.. ......+++++++.. .++++. +.+. ....+.+ ....|+.+.+|+|+.+
T Consensus 191 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~-G~g~---------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~ 258 (357)
T cd03795 191 RPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIV-GEGP---------LEAELEALAAALGLLDRVRFLGRLDDEEKA 258 (357)
T ss_pred CcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEE-eCCh---------hHHHHHHHHHhcCCcceEEEcCCCCHHHHH
Confidence 357777888753 233556777777776 444433 2211 1122221 2246888999999864
Q ss_pred -hhccCCcCceee---ccccc-hhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCc
Q 014232 314 -VLSHIAVGGFWS---HCGWN-STLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEK 388 (428)
Q Consensus 314 -iL~~~~~~~~it---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~ 388 (428)
++..+++..+-+ +.|.| +++||+++|+|+|+....+....... .. +.|...+ .-+.+++.++|.++++|+
T Consensus 259 ~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~-~~d~~~~~~~i~~l~~~~ 333 (357)
T cd03795 259 ALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVP-PGDPAALAEAIRRLLEDP 333 (357)
T ss_pred HHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeC-CCCHHHHHHHHHHHHHCH
Confidence 777888833333 24444 79999999999999765555443322 22 6777665 357999999999999984
Q ss_pred h-hHHHHHHHHHHH
Q 014232 389 E-GQEMRQRAKNLK 401 (428)
Q Consensus 389 ~-~~~~~~~a~~l~ 401 (428)
+ ..++++++++..
T Consensus 334 ~~~~~~~~~~~~~~ 347 (357)
T cd03795 334 ELRERLGEAARERA 347 (357)
T ss_pred HHHHHHHHHHHHHH
Confidence 3 345555555443
No 63
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.76 E-value=1.5e-05 Score=75.15 Aligned_cols=151 Identities=13% Similarity=0.091 Sum_probs=84.5
Q ss_pred CcEEEEEeccccc-CCHHHHHHHHHHHHhC--CCCeEEEEcCCCCCCCccccCCchhHH---H--hhCCCceEEeecCh-
Q 014232 241 NSVLYVSLGSIVS-MDKKELKEMAWGLYNS--KQPFLWVLRPSSTSASSGIELLPEGFE---E--AVGENGCVVKWAPQ- 311 (428)
Q Consensus 241 ~~vv~vsfGS~~~-~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~p~~~~---~--~~~~~~~v~~~~pq- 311 (428)
+..+++..|.+.. ...+.+-..+..+... +.++++ +|... .. ..+...+. + ...+++.+.+|.+.
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~i-vG~~~-~~----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 257 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLI-VGDAQ-GR----RFYYAELLELIKRLGLQDRVTFVGHCSDM 257 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEE-EECCc-cc----chHHHHHHHHHHHcCCcceEEEcCCcccH
Confidence 4467777787664 3344444455555543 334433 33321 11 00111111 1 12356778888543
Q ss_pred HhhhccCCcCceee--cccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhc-C
Q 014232 312 KDVLSHIAVGGFWS--HCGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMV-E 387 (428)
Q Consensus 312 ~~iL~~~~~~~~it--HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~-~ 387 (428)
..+|..+++..+-+ +-|+ ++++||+++|+|+|+.... .....+.+ -+.|..++. -+.+++.++|..++. +
T Consensus 258 ~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i~~-~~~g~~~~~-~~~~~l~~~i~~~~~~~ 331 (355)
T cd03819 258 PAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETVRP-GETGLLVPP-GDAEALAQALDQILSLL 331 (355)
T ss_pred HHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHHhC-CCceEEeCC-CCHHHHHHHHHHHHhhC
Confidence 35888888833323 2233 5999999999999986433 33444533 247777763 688999999965554 4
Q ss_pred ch-hHHHHHHHHHHHHH
Q 014232 388 KE-GQEMRQRAKNLKED 403 (428)
Q Consensus 388 ~~-~~~~~~~a~~l~~~ 403 (428)
++ ..+++++|++..+.
T Consensus 332 ~~~~~~~~~~a~~~~~~ 348 (355)
T cd03819 332 PEGRAKMFAKARMCVET 348 (355)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 22 45566666555443
No 64
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.74 E-value=1.5e-05 Score=76.54 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=55.0
Q ss_pred CCceEEeecChHh---hhccCCcCceeec---cccc-hhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccC
Q 014232 301 ENGCVVKWAPQKD---VLSHIAVGGFWSH---CGWN-STLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLE 373 (428)
Q Consensus 301 ~~~~v~~~~pq~~---iL~~~~~~~~itH---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~ 373 (428)
+++.+.+|+|+.+ +|+.+++ +|.- -|.| +++||+++|+|+|+.+..+ ....+ .+ |.+.... .+
T Consensus 250 ~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~~~~~--~~ 319 (398)
T cd03796 250 DRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMILLAE--PD 319 (398)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-CceeecC--CC
Confidence 5677889998764 7788888 6642 3444 9999999999999977653 22334 33 4343333 37
Q ss_pred HHHHHHHHHHHhcC
Q 014232 374 KGEVEKAVKQLMVE 387 (428)
Q Consensus 374 ~~~l~~ai~~vl~~ 387 (428)
.+++.+++.+++++
T Consensus 320 ~~~l~~~l~~~l~~ 333 (398)
T cd03796 320 VESIVRKLEEAISI 333 (398)
T ss_pred HHHHHHHHHHHHhC
Confidence 89999999999986
No 65
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.72 E-value=1e-05 Score=77.60 Aligned_cols=91 Identities=15% Similarity=0.134 Sum_probs=64.1
Q ss_pred CCCceEEeecChH---hhhccCCcCceeec---ccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCcc
Q 014232 300 GENGCVVKWAPQK---DVLSHIAVGGFWSH---CGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDL 372 (428)
Q Consensus 300 ~~~~~v~~~~pq~---~iL~~~~~~~~itH---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 372 (428)
.+++.+.+++|+. .+|..+++ ++.. -|. .+++||+.+|+|+|+.-.. .....+.+ .+.|...+ .
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~~~e~i~~-~~~g~~~~--~ 349 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSG----GPLETVVD-GETGFLCE--P 349 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCC----CcHHHhcc-CCceEEeC--C
Confidence 4678899999987 46888888 7643 222 5789999999999986443 23344544 25677665 3
Q ss_pred CHHHHHHHHHHHhcCch-hHHHHHHHHH
Q 014232 373 EKGEVEKAVKQLMVEKE-GQEMRQRAKN 399 (428)
Q Consensus 373 ~~~~l~~ai~~vl~~~~-~~~~~~~a~~ 399 (428)
+.+++.++|.+++++++ ..++++++++
T Consensus 350 ~~~~~a~~i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 350 TPEEFAEAMLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred CHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 78999999999998843 3455555544
No 66
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.66 E-value=6.9e-05 Score=70.87 Aligned_cols=114 Identities=14% Similarity=0.162 Sum_probs=74.8
Q ss_pred CCCceEEeecC-hH---hhhccCCcCceeeccc----cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCc
Q 014232 300 GENGCVVKWAP-QK---DVLSHIAVGGFWSHCG----WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEND 371 (428)
Q Consensus 300 ~~~~~v~~~~p-q~---~iL~~~~~~~~itHgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 371 (428)
..++.+.+|++ +. .++..+++ +|.-.. -+++.||+++|+|+|+.... .....+.+ .+.|..++.
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~~~-~~~g~~~~~- 314 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIVDH-GVTGYLAKP- 314 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhheeC-CCceEEeCC-
Confidence 35567889998 44 46888998 887543 47999999999999976442 22233433 246766653
Q ss_pred cCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhcC
Q 014232 372 LEKGEVEKAVKQLMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNLF 428 (428)
Q Consensus 372 ~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 428 (428)
.+.+++.+++.+++.+++ ..++.+++++. . .+.-+....++++++..+++
T Consensus 315 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~---~----~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 315 GDPEDLAEGIEWLLADPDEREELGEAAREL---A----ENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH---H----HHhcCHHHHHHHHHHHHhhC
Confidence 578999999999998832 22333333322 2 23455667777777776654
No 67
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.65 E-value=2.1e-05 Score=74.25 Aligned_cols=108 Identities=19% Similarity=0.263 Sum_probs=69.2
Q ss_pred CCCceEE-eecChH---hhhccCCcCceeec------cccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC
Q 014232 300 GENGCVV-KWAPQK---DVLSHIAVGGFWSH------CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE 369 (428)
Q Consensus 300 ~~~~~v~-~~~pq~---~iL~~~~~~~~itH------gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~ 369 (428)
.+++.+. +|+|+. .++..+++ +|.- |.-++++||+++|+|+|+.+..+ ...+.. -+.|..++
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~-~~~g~~~~ 317 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLD-GGTGLLVP 317 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeee-CCCcEEEc
Confidence 3566777 458875 47788888 6632 22458899999999999987654 233434 36677666
Q ss_pred CccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 014232 370 NDLEKGEVEKAVKQLMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEF 424 (428)
Q Consensus 370 ~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 424 (428)
. -+.+++.+++.+++++.+ ..++++++++..+. -+-...++++.+.
T Consensus 318 ~-~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~--------~s~~~~~~~~~~~ 364 (366)
T cd03822 318 P-GDPAALAEAIRRLLADPELAQALRARAREYARA--------MSWERVAERYLRL 364 (366)
T ss_pred C-CCHHHHHHHHHHHHcChHHHHHHHHHHHHHHhh--------CCHHHHHHHHHHH
Confidence 3 468999999999999832 33444444443333 3344455555544
No 68
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.64 E-value=2.8e-05 Score=73.72 Aligned_cols=91 Identities=16% Similarity=0.241 Sum_probs=65.1
Q ss_pred CCCceEEeecChHh---hhccCCcCceeecc----------ccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEE
Q 014232 300 GENGCVVKWAPQKD---VLSHIAVGGFWSHC----------GWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGL 366 (428)
Q Consensus 300 ~~~~~v~~~~pq~~---iL~~~~~~~~itHg----------G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~ 366 (428)
.+++.+.+++|+.+ ++..+++ +|... --+++.||+++|+|+|+.+..+ +...+.+ .+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~-~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVED-GETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheec-CCeeE
Confidence 46778889998765 5888888 66422 2468999999999999876643 5555544 37788
Q ss_pred EcCCccCHHHHHHHHHHHhcCch-hHHHHHHHH
Q 014232 367 QLENDLEKGEVEKAVKQLMVEKE-GQEMRQRAK 398 (428)
Q Consensus 367 ~l~~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~ 398 (428)
.++. -+.+++.++|.++++|++ ..+++++++
T Consensus 317 ~~~~-~d~~~l~~~i~~l~~~~~~~~~~~~~a~ 348 (367)
T cd05844 317 LVPE-GDVAALAAALGRLLADPDLRARMGAAGR 348 (367)
T ss_pred EECC-CCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 7763 578999999999999833 233444443
No 69
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.59 E-value=2e-06 Score=81.61 Aligned_cols=130 Identities=14% Similarity=0.150 Sum_probs=84.8
Q ss_pred CCcEEEEEecccccC-CHHHHHHHHHHHHhCCCC-eEEEEcCCCCCCCccccCCchhHHH---hh---CCCceEEeecCh
Q 014232 240 PNSVLYVSLGSIVSM-DKKELKEMAWGLYNSKQP-FLWVLRPSSTSASSGIELLPEGFEE---AV---GENGCVVKWAPQ 311 (428)
Q Consensus 240 ~~~vv~vsfGS~~~~-~~~~~~~~~~al~~~~~~-~iw~~~~~~~~~~~~~~~~p~~~~~---~~---~~~~~v~~~~pq 311 (428)
+++.|++++|..... ....+..++++++....+ +.+...+++. .-..+.+ +. .+++.+.+..++
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--------~~~~l~~~~~~~~~~~~~v~~~~~~~~ 268 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--------TRPRIREAGLEFLGHHPNVLLISPLGY 268 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--------hHHHHHHHHHhhccCCCCEEEECCcCH
Confidence 355788888877653 455677788888775432 4444433211 1122221 11 356677766655
Q ss_pred H---hhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 312 K---DVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 312 ~---~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
. .++..+++ ||+..| |.+.||+++|+|+|+++.. |. +..+.+ .|+++.+.. +.+++.+++.+++++
T Consensus 269 ~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~-~g~~~~~~~--~~~~i~~~i~~ll~~ 337 (363)
T cd03786 269 LYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVE-SGTNVLVGT--DPEAILAAIEKLLSD 337 (363)
T ss_pred HHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhh-eeeEEecCC--CHHHHHHHHHHHhcC
Confidence 4 46778898 999999 7888999999999998643 22 333434 377766652 589999999999988
No 70
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.58 E-value=7.2e-05 Score=70.72 Aligned_cols=155 Identities=15% Similarity=0.225 Sum_probs=83.2
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCC--CCeEEEEcCCCCCCCccccCCchhHH--HhhCCCceEEeecChHh---hhc
Q 014232 244 LYVSLGSIVSMDKKELKEMAWGLYNSK--QPFLWVLRPSSTSASSGIELLPEGFE--EAVGENGCVVKWAPQKD---VLS 316 (428)
Q Consensus 244 v~vsfGS~~~~~~~~~~~~~~al~~~~--~~~iw~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~v~~~~pq~~---iL~ 316 (428)
.++.+|++.. ..-...++++++... .++++ +|...... .+-..+. ....+++.+.+++|+.+ ++.
T Consensus 195 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~i-vG~~~~~~-----~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~ 266 (363)
T cd04955 195 YYLLVGRIVP--ENNIDDLIEAFSKSNSGKKLVI-VGNADHNT-----PYGKLLKEKAAADPRIIFVGPIYDQELLELLR 266 (363)
T ss_pred EEEEEecccc--cCCHHHHHHHHHhhccCceEEE-EcCCCCcc-----hHHHHHHHHhCCCCcEEEccccChHHHHHHHH
Confidence 3456788764 223445666666654 44443 44321110 0111222 12346788899999875 566
Q ss_pred cCCcCceeecccc-----chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCch-h
Q 014232 317 HIAVGGFWSHCGW-----NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKE-G 390 (428)
Q Consensus 317 ~~~~~~~itHgG~-----~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~-~ 390 (428)
.+++ ++-+.-. +++.||+++|+|+|+....+. ...+ +. .|..++. .. .+.+++.+++++.+ .
T Consensus 267 ~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~-~~--~g~~~~~--~~-~l~~~i~~l~~~~~~~ 334 (363)
T cd04955 267 YAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVL-GD--KAIYFKV--GD-DLASLLEELEADPEEV 334 (363)
T ss_pred hCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceee-cC--CeeEecC--ch-HHHHHHHHHHhCHHHH
Confidence 6777 6554433 479999999999998754421 1222 21 2333331 11 29999999998832 2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 014232 391 QEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFF 425 (428)
Q Consensus 391 ~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 425 (428)
..+.+++++ ...+.=+-...++++++.+
T Consensus 335 ~~~~~~~~~-------~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 335 SAMAKAARE-------RIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHHHHH-------HHHHhCCHHHHHHHHHHHh
Confidence 223333322 2223445566666666544
No 71
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=98.55 E-value=3.1e-09 Score=85.93 Aligned_cols=110 Identities=17% Similarity=0.104 Sum_probs=64.6
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHH---hhchhHHHHHHHHH--
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNA---NCGAPFHKCLVQMM-- 75 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~l~~l~-- 75 (428)
+++||++|.+|||+|++++++...+.+.+ .|++|++++.. .................. .... +...+.+..
T Consensus 15 ~lala~~L~~rGh~V~~~~~~~~~~~v~~-~Gl~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 90 (139)
T PF03033_consen 15 FLALARALRRRGHEVRLATPPDFRERVEA-AGLEFVPIPGD--SRLPRSLEPLANLRRLARLIRGLEE-AMRILARFRPD 90 (139)
T ss_dssp HHHHHHHHHHTT-EEEEEETGGGHHHHHH-TT-EEEESSSC--GGGGHHHHHHHHHHCHHHHHHHHHH-HHHHHHHHHHC
T ss_pred HHHHHHHHhccCCeEEEeecccceecccc-cCceEEEecCC--cCcCcccchhhhhhhHHHHhhhhhH-HHHHhhccCcc
Confidence 47899999999999999998877766655 49999999865 000000001111111111 1111 112222211
Q ss_pred ---HccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccH
Q 014232 76 ---KQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSA 115 (428)
Q Consensus 76 ---~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~ 115 (428)
...+.. ..|+++.+.....+..+|++++||.+.....|.
T Consensus 91 ~~~~~~~~~-~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~ 132 (139)
T PF03033_consen 91 LVVAAGGYV-ADDVIIAAPLAFAAALVAEQLGIPGVANRLFPW 132 (139)
T ss_dssp CCCHCTTTT-ECCEECHHHHHTHHHHHHHHHTS-EEEEESSGG
T ss_pred hhhhccCcc-cchHHHhhhhcCccceeEhhhCchHHHHhhCCc
Confidence 111011 467888888778899999999999999988764
No 72
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.53 E-value=0.00019 Score=67.74 Aligned_cols=91 Identities=11% Similarity=0.157 Sum_probs=62.1
Q ss_pred CCCceEEeecChHh---hhccCCcCceeecc---c-cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCcc
Q 014232 300 GENGCVVKWAPQKD---VLSHIAVGGFWSHC---G-WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDL 372 (428)
Q Consensus 300 ~~~~~v~~~~pq~~---iL~~~~~~~~itHg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 372 (428)
.+++.+.+|+++.+ ++..+++ +|.-. | -+++.||+++|+|+|+.+.. .....+ .. +.|...+.
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~-~~-~~~~~~~~-- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELI-EY-GCGWVVDD-- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHh-hc-CceEEeCC--
Confidence 36778889999665 5788888 65432 2 46899999999999987543 334444 33 67766653
Q ss_pred CHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 014232 373 EKGEVEKAVKQLMVEKE-GQEMRQRAKNL 400 (428)
Q Consensus 373 ~~~~l~~ai~~vl~~~~-~~~~~~~a~~l 400 (428)
+.+++.++|.+++++.+ ..++.+++++.
T Consensus 331 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 DVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred ChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 45999999999998832 23444444443
No 73
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.52 E-value=4.5e-05 Score=71.83 Aligned_cols=91 Identities=18% Similarity=0.215 Sum_probs=62.4
Q ss_pred CCCceEEeecChHh---hhccCCcCceeec----------cccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEE
Q 014232 300 GENGCVVKWAPQKD---VLSHIAVGGFWSH----------CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGL 366 (428)
Q Consensus 300 ~~~~~v~~~~pq~~---iL~~~~~~~~itH----------gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~ 366 (428)
.+|+.+.+++|+.+ ++.++++ +|.- |.-++++||+++|+|+|+.+..+ ....+ .....|.
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~ 307 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGL 307 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceE
Confidence 46778889998664 6778888 6652 22368999999999999876532 22334 3324777
Q ss_pred EcCCccCHHHHHHHHHHHhcCch-hHHHHHHHH
Q 014232 367 QLENDLEKGEVEKAVKQLMVEKE-GQEMRQRAK 398 (428)
Q Consensus 367 ~l~~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~ 398 (428)
.++. -+.+++.++|.+++.+++ ..+++++|+
T Consensus 308 ~~~~-~~~~~l~~~i~~~~~~~~~~~~~~~~a~ 339 (355)
T cd03799 308 LVPP-GDPEALADAIERLLDDPELRREMGEAGR 339 (355)
T ss_pred EeCC-CCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 7763 488999999999998843 233444443
No 74
>PLN02275 transferase, transferring glycosyl groups
Probab=98.42 E-value=0.00024 Score=67.51 Aligned_cols=75 Identities=16% Similarity=0.207 Sum_probs=53.0
Q ss_pred CCceEE-eecChHhh---hccCCcCceee-c-----ccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC
Q 014232 301 ENGCVV-KWAPQKDV---LSHIAVGGFWS-H-----CGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE 369 (428)
Q Consensus 301 ~~~~v~-~~~pq~~i---L~~~~~~~~it-H-----gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~ 369 (428)
+|+.+. .|+|+.++ |+.+++ ||. + -|. ++++||+++|+|+|+.... .+...+.+ -+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~-g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKD-GKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccC-CCCeEEEC
Confidence 455555 48998765 899999 773 1 122 4799999999999987432 24455544 36788876
Q ss_pred CccCHHHHHHHHHHHh
Q 014232 370 NDLEKGEVEKAVKQLM 385 (428)
Q Consensus 370 ~~~~~~~l~~ai~~vl 385 (428)
+.+++.++|.+++
T Consensus 359 ---~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ---SSSELADQLLELL 371 (371)
T ss_pred ---CHHHHHHHHHHhC
Confidence 4788999998764
No 75
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=98.41 E-value=0.0003 Score=67.97 Aligned_cols=80 Identities=14% Similarity=0.105 Sum_probs=55.3
Q ss_pred CCCceEEeecChHh---hhccCCcCceeecc---cc-chhHHhhhcCCceeccccccchhhhHHHHhh---hheeEEEcC
Q 014232 300 GENGCVVKWAPQKD---VLSHIAVGGFWSHC---GW-NSTLESICEGVPMICRPGFGDQRVSARYVSH---VWRIGLQLE 369 (428)
Q Consensus 300 ~~~~~v~~~~pq~~---iL~~~~~~~~itHg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~---~~g~g~~l~ 369 (428)
.+++.+.+++|+.+ +|..+++ +|+-. |. .++.||+++|+|.|+.-..+. ..-+.. .-..|...+
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp----~~~iv~~~~~g~~G~l~~ 377 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP----LLDIVVPWDGGPTGFLAS 377 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCC----chheeeccCCCCceEEeC
Confidence 46788899999875 7788888 66421 22 388999999999997644331 111221 124676643
Q ss_pred CccCHHHHHHHHHHHhcCc
Q 014232 370 NDLEKGEVEKAVKQLMVEK 388 (428)
Q Consensus 370 ~~~~~~~l~~ai~~vl~~~ 388 (428)
+.++++++|.++++++
T Consensus 378 ---d~~~la~ai~~ll~~~ 393 (419)
T cd03806 378 ---TAEEYAEAIEKILSLS 393 (419)
T ss_pred ---CHHHHHHHHHHHHhCC
Confidence 8999999999999863
No 76
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.40 E-value=1.9e-05 Score=73.24 Aligned_cols=157 Identities=14% Similarity=0.078 Sum_probs=96.1
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCCC-eEEEEcCCCCCCCccccCCchhHHHhhCC--CceEEeecChHhhhccC
Q 014232 242 SVLYVSLGSIVSMDKKELKEMAWGLYNSKQP-FLWVLRPSSTSASSGIELLPEGFEEAVGE--NGCVVKWAPQKDVLSHI 318 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~-~iw~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~v~~~~pq~~iL~~~ 318 (428)
++|.+--||...--...+-.++++.+.+..+ ..+.+..... . +.+.+.... ...+.+ .-.+++..+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--------~-~~i~~~~~~~~~~~~~~--~~~~~m~~a 236 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--------G-KDLKEIYGDISEFEISY--DTHKALLEA 236 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--------H-HHHHHHHhcCCCcEEec--cHHHHHHhh
Confidence 5898989998763334455455555444322 2222222110 1 222222211 222332 334789999
Q ss_pred CcCceeeccccchhHHhhhcCCceeccccc--cchhhhHHHHhh--hheeEEEc--------------CCccCHHHHHHH
Q 014232 319 AVGGFWSHCGWNSTLESICEGVPMICRPGF--GDQRVSARYVSH--VWRIGLQL--------------ENDLEKGEVEKA 380 (428)
Q Consensus 319 ~~~~~itHgG~~s~~eal~~GvP~v~~P~~--~DQ~~na~~v~~--~~g~g~~l--------------~~~~~~~~l~~a 380 (428)
++ .|+-+|..|+ |+...|+|||+ ++- .=|+.||+++++ ..|..--+ ....|++.|.++
T Consensus 237 Dl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~ 312 (347)
T PRK14089 237 EF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKA 312 (347)
T ss_pred hH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHH
Confidence 99 9999999999 99999999999 443 468889999872 13443222 136899999999
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 014232 381 VKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFL 422 (428)
Q Consensus 381 i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 422 (428)
+.+ ... +++++..+++++.+. + |++...++.+.
T Consensus 313 i~~-~~~---~~~~~~~~~l~~~l~----~-~a~~~~A~~i~ 345 (347)
T PRK14089 313 YKE-MDR---EKFFKKSKELREYLK----H-GSAKNVAKILK 345 (347)
T ss_pred HHH-HHH---HHHHHHHHHHHHHhc----C-CHHHHHHHHHh
Confidence 877 222 567777777777664 3 66666665544
No 77
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.39 E-value=2.6e-06 Score=66.22 Aligned_cols=116 Identities=15% Similarity=0.155 Sum_probs=77.0
Q ss_pred cEEEEEecccccC---CHHHHHHHHHHHHhCCC-CeEEEEcCCCCCCCccccCCchhHHHhhCCCceEE---eecCh-Hh
Q 014232 242 SVLYVSLGSIVSM---DKKELKEMAWGLYNSKQ-PFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVV---KWAPQ-KD 313 (428)
Q Consensus 242 ~vv~vsfGS~~~~---~~~~~~~~~~al~~~~~-~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~---~~~pq-~~ 313 (428)
..+||+-||.... ..-...+..+.|.+.|. +.|+.+|.+... .++.........++.+ +|-|- .+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~-------~~d~~~~~~k~~gl~id~y~f~psl~e 76 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPF-------FGDPIDLIRKNGGLTIDGYDFSPSLTE 76 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccC-------CCCHHHhhcccCCeEEEEEecCccHHH
Confidence 3799999998741 11222446677777775 666677654211 2222221111222332 66775 45
Q ss_pred hhccCCcCceeeccccchhHHhhhcCCceecccc----ccchhhhHHHHhhhheeEEE
Q 014232 314 VLSHIAVGGFWSHCGWNSTLESICEGVPMICRPG----FGDQRVSARYVSHVWRIGLQ 367 (428)
Q Consensus 314 iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~~v~~~~g~g~~ 367 (428)
..+.+++ +|+|+|+||++|.|..|+|.|+++- -..|-.-|..++++ |.=..
T Consensus 77 ~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gyL~~ 131 (170)
T KOG3349|consen 77 DIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GYLYY 131 (170)
T ss_pred HHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-CcEEE
Confidence 6677898 9999999999999999999999984 35788889988764 65444
No 78
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.34 E-value=0.00027 Score=65.85 Aligned_cols=80 Identities=14% Similarity=0.140 Sum_probs=54.3
Q ss_pred CCCceEEeecChH-hhhccCCcCceeec----cccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCH
Q 014232 300 GENGCVVKWAPQK-DVLSHIAVGGFWSH----CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEK 374 (428)
Q Consensus 300 ~~~~~v~~~~pq~-~iL~~~~~~~~itH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 374 (428)
.+++.+.+|.+.. +++..+++ +|.- |.-+++.||+++|+|+|+.... .....+.+ .+.|...+. -+.
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~-~~~g~~~~~-~~~ 316 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILED-GENGLLVPV-GDE 316 (353)
T ss_pred CccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcC-CCceEEECC-CCH
Confidence 3566777887654 58888888 6633 2246899999999999986443 44555644 367887764 566
Q ss_pred HHH---HHHHHHHhcC
Q 014232 375 GEV---EKAVKQLMVE 387 (428)
Q Consensus 375 ~~l---~~ai~~vl~~ 387 (428)
+.+ .+++.++..+
T Consensus 317 ~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 317 AALAAAALALLDLLLD 332 (353)
T ss_pred HHHHHHHHHHHhccCC
Confidence 666 5555566666
No 79
>PLN00142 sucrose synthase
Probab=98.28 E-value=0.0012 Score=67.38 Aligned_cols=69 Identities=12% Similarity=0.227 Sum_probs=44.3
Q ss_pred eeec---cccc-hhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHH----hcCch-hHHH
Q 014232 323 FWSH---CGWN-STLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQL----MVEKE-GQEM 393 (428)
Q Consensus 323 ~itH---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~v----l~~~~-~~~~ 393 (428)
||.- =|+| ++.||+++|+|+|+....+ ....|++ -..|..++. -+.++++++|.++ ++|++ ..+|
T Consensus 670 fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~d-G~tG~LV~P-~D~eaLA~aI~~lLekLl~Dp~lr~~m 743 (815)
T PLN00142 670 FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVD-GVSGFHIDP-YHGDEAANKIADFFEKCKEDPSYWNKI 743 (815)
T ss_pred EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcC-CCcEEEeCC-CCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 7753 4554 8999999999999865433 4444543 246887774 5777888887654 45632 3344
Q ss_pred HHHH
Q 014232 394 RQRA 397 (428)
Q Consensus 394 ~~~a 397 (428)
.+++
T Consensus 744 g~~A 747 (815)
T PLN00142 744 SDAG 747 (815)
T ss_pred HHHH
Confidence 4444
No 80
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.25 E-value=0.0023 Score=60.00 Aligned_cols=108 Identities=17% Similarity=0.230 Sum_probs=65.4
Q ss_pred CCceEEeecCh-HhhhccCCcCceeecccc----chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHH
Q 014232 301 ENGCVVKWAPQ-KDVLSHIAVGGFWSHCGW----NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKG 375 (428)
Q Consensus 301 ~~~~v~~~~pq-~~iL~~~~~~~~itHgG~----~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~ 375 (428)
.++.+.+...+ ..++..+++ +|..+.+ +++.||+++|+|+|+... ..+...+.+ .|..++. -+.+
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~---~g~~~~~-~~~~ 320 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGD---TGFLVPP-GDPE 320 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhc---CCEEeCC-CCHH
Confidence 34555554433 368889998 8866544 799999999999998543 344444433 4444442 4689
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 014232 376 EVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEF 424 (428)
Q Consensus 376 ~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 424 (428)
++.+++.+++++.+ .+++.++..++.++ +.=+-...++.+.+.
T Consensus 321 ~l~~~i~~l~~~~~--~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~ 363 (365)
T cd03807 321 ALAEAIEALLADPA--LRQALGEAARERIE----ENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHHHHHHHhChH--HHHHHHHHHHHHHH----HhCCHHHHHHHHHHH
Confidence 99999999998832 22222333333333 334455555555543
No 81
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.24 E-value=0.00026 Score=66.72 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=54.4
Q ss_pred hCCCceEEeecChHh---hhccCCcCceeec----cccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCc
Q 014232 299 VGENGCVVKWAPQKD---VLSHIAVGGFWSH----CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEND 371 (428)
Q Consensus 299 ~~~~~~v~~~~pq~~---iL~~~~~~~~itH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 371 (428)
..+++.+.+|+|+.+ +|..+++ +|.- |.-+++.||+++|+|+|+....+ ....+ .. .|..+..
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~~--~~~~~~~- 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-GD--AALYFDP- 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-cC--ceeeeCC-
Confidence 346778889998874 6788887 5533 23458999999999999865422 11122 22 2434432
Q ss_pred cCHHHHHHHHHHHhcCc
Q 014232 372 LEKGEVEKAVKQLMVEK 388 (428)
Q Consensus 372 ~~~~~l~~ai~~vl~~~ 388 (428)
-+.+++.+++.+++.|+
T Consensus 321 ~~~~~~~~~i~~l~~~~ 337 (365)
T cd03809 321 LDPEALAAAIERLLEDP 337 (365)
T ss_pred CCHHHHHHHHHHHhcCH
Confidence 47899999999999883
No 82
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.23 E-value=0.00041 Score=64.78 Aligned_cols=128 Identities=15% Similarity=0.073 Sum_probs=78.0
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHh--hCCCceEEeecChHh---hhccC
Q 014232 244 LYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEA--VGENGCVVKWAPQKD---VLSHI 318 (428)
Q Consensus 244 v~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~v~~~~pq~~---iL~~~ 318 (428)
+++..|.... ......+++++++.+.++++. |...... .+-....+. ..+++.+.+++++.+ +++.+
T Consensus 173 ~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~-G~~~~~~-----~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 173 YLLFLGRISP--EKGPHLAIRAARRAGIPLKLA-GPVSDPD-----YFYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred EEEEEEeecc--ccCHHHHHHHHHhcCCeEEEE-eCCCCHH-----HHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 4555677643 233455777888887776654 4321000 000111112 247788899999864 67888
Q ss_pred CcCceee--cccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 319 AVGGFWS--HCGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 319 ~~~~~it--HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
++-++-+ +-|+ .++.||+++|+|+|+.... .....+ .+-..|...+. .+++.+++.+++..
T Consensus 245 d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i-~~~~~g~l~~~---~~~l~~~l~~l~~~ 308 (335)
T cd03802 245 RALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV-EDGVTGFLVDS---VEELAAAVARADRL 308 (335)
T ss_pred cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe-eCCCcEEEeCC---HHHHHHHHHHHhcc
Confidence 8822223 2344 4899999999999987553 333344 33136777663 89999999988765
No 83
>PLN02949 transferase, transferring glycosyl groups
Probab=98.14 E-value=0.00067 Score=66.07 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=68.7
Q ss_pred CCCceEEeecChHh---hhccCCcCceee---ccccc-hhHHhhhcCCceeccccccchhhhHHHHhhh-he-eEEEcCC
Q 014232 300 GENGCVVKWAPQKD---VLSHIAVGGFWS---HCGWN-STLESICEGVPMICRPGFGDQRVSARYVSHV-WR-IGLQLEN 370 (428)
Q Consensus 300 ~~~~~v~~~~pq~~---iL~~~~~~~~it---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~-~g-~g~~l~~ 370 (428)
.+++.+.+++|+.+ +|.++++ +|+ +=|+| ++.||+++|+|.|+....+--. ..+.++ -| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC--
Confidence 46788899998775 6788887 663 23444 7999999999999986543100 011110 01 34333
Q ss_pred ccCHHHHHHHHHHHhcCc-h-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 371 DLEKGEVEKAVKQLMVEK-E-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 371 ~~~~~~l~~ai~~vl~~~-~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
-+.++++++|.++++++ + ..++.+++++-.+. =+.....+++.+.+.
T Consensus 407 -~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~--------FS~e~~~~~~~~~i~ 455 (463)
T PLN02949 407 -TTVEEYADAILEVLRMRETERLEIAAAARKRANR--------FSEQRFNEDFKDAIR 455 (463)
T ss_pred -CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH--------cCHHHHHHHHHHHHH
Confidence 27899999999999842 2 34566666554333 345555555555544
No 84
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.12 E-value=0.0011 Score=61.12 Aligned_cols=126 Identities=16% Similarity=0.090 Sum_probs=73.5
Q ss_pred CCcEEEEEeccccc----CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEE-eecChHhh
Q 014232 240 PNSVLYVSLGSIVS----MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVV-KWAPQKDV 314 (428)
Q Consensus 240 ~~~vv~vsfGS~~~----~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~-~~~pq~~i 314 (428)
+++.|+|-+-+... .....+..+++.|++.+..++..-+... .++-+ ++. ++.+. .-+.-.++
T Consensus 178 ~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~---------~~~~~-~~~--~~~i~~~~vd~~~L 245 (335)
T PF04007_consen 178 DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED---------QRELF-EKY--GVIIPPEPVDGLDL 245 (335)
T ss_pred CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc---------hhhHH-hcc--CccccCCCCCHHHH
Confidence 35577777766332 2345566788888888766444433221 11111 111 12332 55666689
Q ss_pred hccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHh
Q 014232 315 LSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLM 385 (428)
Q Consensus 315 L~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl 385 (428)
|.++++ +|+=|| ....||..-|+|.|.+ +-++-...-+.+.+ .|. . ...-+.+++.+.|.+.+
T Consensus 246 l~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~-~Gl--l-~~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 246 LYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIE-KGL--L-YHSTDPDEIVEYVRKNL 308 (335)
T ss_pred HHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHH-CCC--e-EecCCHHHHHHHHHHhh
Confidence 999999 999888 7788999999999975 11221122233434 354 2 22356677766555443
No 85
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.06 E-value=0.00052 Score=64.21 Aligned_cols=201 Identities=18% Similarity=0.177 Sum_probs=108.7
Q ss_pred hhhhHHHHHHHHhhCCCCcceec-cCCCCCCCCCCCCccccchhhh-hcccCCCCcEEEEEecccccCCHHHHHHHHHHH
Q 014232 189 NCIEQSSLSQLQQQCNIPIFPVG-PLHKFAPSSPGSLLKEDTSCIS-WLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGL 266 (428)
Q Consensus 189 ~~le~~~l~~~~~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al 266 (428)
+.||.+.+. . .+.++.+|| |+...-.. ........+ +++ +++++|-+=-||...-=...+-.++++.
T Consensus 141 fPFE~~~y~---~-~g~~~~~VGHPl~d~~~~-----~~~~~~~~~~~l~--~~~~iIaLLPGSR~~EI~rllP~~l~aa 209 (373)
T PF02684_consen 141 FPFEPEFYK---K-HGVPVTYVGHPLLDEVKP-----EPDRAEAREKLLD--PDKPIIALLPGSRKSEIKRLLPIFLEAA 209 (373)
T ss_pred CcccHHHHh---c-cCCCeEEECCcchhhhcc-----CCCHHHHHHhcCC--CCCcEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 345555432 2 356799999 77664432 111111222 234 3567899999998652223333344443
Q ss_pred Hh-----CCCCeEEEEcCCCCCCCccccCCchhHH---HhhCCCceEE-eecChHhhhccCCcCceeeccccchhHHhhh
Q 014232 267 YN-----SKQPFLWVLRPSSTSASSGIELLPEGFE---EAVGENGCVV-KWAPQKDVLSHIAVGGFWSHCGWNSTLESIC 337 (428)
Q Consensus 267 ~~-----~~~~~iw~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~v~-~~~pq~~iL~~~~~~~~itHgG~~s~~eal~ 337 (428)
+. .+.+|++...... ..+-+. .....+..+. ..-.-.++|..+++ .+.-+|- .|+|+..
T Consensus 210 ~~l~~~~p~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SGT-aTLE~Al 277 (373)
T PF02684_consen 210 KLLKKQRPDLQFVVPVAPEV---------HEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASGT-ATLEAAL 277 (373)
T ss_pred HHHHHhCCCeEEEEecCCHH---------HHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCCH-HHHHHHH
Confidence 33 2345665432210 111111 1112222322 22345568888888 7776665 5789999
Q ss_pred cCCceecccc-ccchhhhHHHHhhhheeEEEc--------------CCccCHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q 014232 338 EGVPMICRPG-FGDQRVSARYVSHVWRIGLQL--------------ENDLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKE 402 (428)
Q Consensus 338 ~GvP~v~~P~-~~DQ~~na~~v~~~~g~g~~l--------------~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~ 402 (428)
.|+|||++=- ..=-+..|+++.+ ... +.+ ....|++.+.+++.++++| +..++..+...+
T Consensus 278 ~g~P~Vv~Yk~~~lt~~iak~lvk-~~~-isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~---~~~~~~~~~~~~ 352 (373)
T PF02684_consen 278 LGVPMVVAYKVSPLTYFIAKRLVK-VKY-ISLPNIIAGREVVPELIQEDATPENIAAELLELLEN---PEKRKKQKELFR 352 (373)
T ss_pred hCCCEEEEEcCcHHHHHHHHHhhc-CCE-eechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcC---HHHHHHHHHHHH
Confidence 9999998622 2223344566644 232 222 1258999999999999999 444555555555
Q ss_pred HHHHHHhcCCChHHH
Q 014232 403 DVELCIKESGSSSSS 417 (428)
Q Consensus 403 ~~~~~~~~~g~~~~~ 417 (428)
.+++.++.+.++..+
T Consensus 353 ~~~~~~~~~~~~~~~ 367 (373)
T PF02684_consen 353 EIRQLLGPGASSRAA 367 (373)
T ss_pred HHHHhhhhccCCHHH
Confidence 555444455555443
No 86
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.05 E-value=6.3e-05 Score=70.33 Aligned_cols=139 Identities=14% Similarity=0.196 Sum_probs=82.1
Q ss_pred CCCcEEEEEecccccCC-H---HHHHHHHHHHHhC-CCCeEEEEcCCCCCCCccccCCchhHHHhhC--CCceEEeecCh
Q 014232 239 APNSVLYVSLGSIVSMD-K---KELKEMAWGLYNS-KQPFLWVLRPSSTSASSGIELLPEGFEEAVG--ENGCVVKWAPQ 311 (428)
Q Consensus 239 ~~~~vv~vsfGS~~~~~-~---~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~v~~~~pq 311 (428)
.+++.++|++=...... + ..+..+++++.+. +.++||.+..++. .-..+.++.. +|+.+.+-+++
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~--------~~~~i~~~l~~~~~v~~~~~l~~ 249 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPR--------GSDIIIEKLKKYDNVRLIEPLGY 249 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH--------HHHHHHHHHTT-TTEEEE----H
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch--------HHHHHHHHhcccCCEEEECCCCH
Confidence 46779999995555544 3 3455556666665 6789998764321 1112222222 47888866665
Q ss_pred H---hhhccCCcCceeeccccchhH-HhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 312 K---DVLSHIAVGGFWSHCGWNSTL-ESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 312 ~---~iL~~~~~~~~itHgG~~s~~-eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
. .+|.++++ +||..| +++ ||.+.|+|.|.+ -|+-..=.-+ . .|..+-+. .+.+++.+++++++.+
T Consensus 250 ~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~i---R~~geRqe~r-~-~~~nvlv~--~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 250 EEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNI---RDSGERQEGR-E-RGSNVLVG--TDPEAIIQAIEKALSD 318 (346)
T ss_dssp HHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEEC---SSS-S-HHHH-H-TTSEEEET--SSHHHHHHHHHHHHH-
T ss_pred HHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEe---cCCCCCHHHH-h-hcceEEeC--CCHHHHHHHHHHHHhC
Confidence 4 57889999 999999 666 999999999999 4433333333 2 25555544 7899999999999987
Q ss_pred chhHHHHHHHHH
Q 014232 388 KEGQEMRQRAKN 399 (428)
Q Consensus 388 ~~~~~~~~~a~~ 399 (428)
....++.+.
T Consensus 319 ---~~~~~~~~~ 327 (346)
T PF02350_consen 319 ---KDFYRKLKN 327 (346)
T ss_dssp ---HHHHHHHHC
T ss_pred ---hHHHHhhcc
Confidence 444444433
No 87
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.01 E-value=0.00036 Score=66.57 Aligned_cols=115 Identities=13% Similarity=0.208 Sum_probs=74.8
Q ss_pred hCCCceEEeecChHh---hhccCCcCceeecc----cc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC
Q 014232 299 VGENGCVVKWAPQKD---VLSHIAVGGFWSHC----GW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN 370 (428)
Q Consensus 299 ~~~~~~v~~~~pq~~---iL~~~~~~~~itHg----G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~ 370 (428)
.+.++.+.+++|+.+ ++..+++ ||... |. .+++||+++|+|+|+....+ +...+.+ -..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~-~~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLE-GITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhccc-CCceEEEeC
Confidence 346778889998765 5889998 77533 33 57789999999999876532 3344433 256765543
Q ss_pred ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 371 DLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 371 ~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
..+.+++.++|.++++| ++.++. ++..++...+.=+-...++++.+.+.+
T Consensus 328 ~~d~~~la~~I~~ll~d---~~~~~~----~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 328 PMTSDSIISDINRTLAD---PELTQI----AEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred CCCHHHHHHHHHHHHcC---HHHHHH----HHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 46899999999999998 443322 222222222445566666666666543
No 88
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.00 E-value=0.00024 Score=67.04 Aligned_cols=135 Identities=16% Similarity=0.233 Sum_probs=88.7
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChH---hhhccCCc
Q 014232 244 LYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQK---DVLSHIAV 320 (428)
Q Consensus 244 v~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~---~iL~~~~~ 320 (428)
.++..|++.. ......++++++..+.+++++ |.+. ..+.+.+...+|+.+.+++|+. .++..+++
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~iv-G~g~---------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~ 264 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVI-GDGP---------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARA 264 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEE-ECCh---------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCE
Confidence 4556677653 333566788888888776654 3321 1133333456788999999985 47888998
Q ss_pred Ccee--ecccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCc-h-hHHHHH
Q 014232 321 GGFW--SHCGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEK-E-GQEMRQ 395 (428)
Q Consensus 321 ~~~i--tHgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~-~-~~~~~~ 395 (428)
+| +.-|+ .++.||+++|+|+|+....+ ....+.+ -+.|..++. -+.++++++|.++++++ + +..+++
T Consensus 265 --~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~-~~~G~~~~~-~~~~~la~~i~~l~~~~~~~~~~~~~ 336 (351)
T cd03804 265 --FLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVID-GVTGILFEE-QTVESLAAAVERFEKNEDFDPQAIRA 336 (351)
T ss_pred --EEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeC-CCCEEEeCC-CCHHHHHHHHHHHHhCcccCHHHHHH
Confidence 55 34444 35789999999999976533 3333444 257887763 57888999999999884 1 334444
Q ss_pred HHH
Q 014232 396 RAK 398 (428)
Q Consensus 396 ~a~ 398 (428)
+++
T Consensus 337 ~~~ 339 (351)
T cd03804 337 HAE 339 (351)
T ss_pred HHH
Confidence 443
No 89
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=97.99 E-value=0.028 Score=57.69 Aligned_cols=79 Identities=10% Similarity=0.090 Sum_probs=50.0
Q ss_pred CCceEEeec-Ch---Hhhhcc-CC-cCceeec---ccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC
Q 014232 301 ENGCVVKWA-PQ---KDVLSH-IA-VGGFWSH---CGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN 370 (428)
Q Consensus 301 ~~~~v~~~~-pq---~~iL~~-~~-~~~~itH---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~ 370 (428)
+++.+.++. +. .+++.+ ++ .+.||.- =|. .+++||+++|+|+|+.-.. .....|.+ -..|..++.
T Consensus 619 g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV~d-g~tGfLVdp 693 (784)
T TIGR02470 619 GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEIIQD-GVSGFHIDP 693 (784)
T ss_pred CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcC-CCcEEEeCC
Confidence 556666654 32 234543 21 1227753 333 4899999999999986543 34445544 256888874
Q ss_pred ccCHHHHHHHHHHHh
Q 014232 371 DLEKGEVEKAVKQLM 385 (428)
Q Consensus 371 ~~~~~~l~~ai~~vl 385 (428)
-+.++++++|.+++
T Consensus 694 -~D~eaLA~aL~~ll 707 (784)
T TIGR02470 694 -YHGEEAAEKIVDFF 707 (784)
T ss_pred -CCHHHHHHHHHHHH
Confidence 57888999998876
No 90
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.98 E-value=0.0038 Score=58.82 Aligned_cols=80 Identities=11% Similarity=0.035 Sum_probs=56.1
Q ss_pred CCCceEEeecCh-HhhhccCCcCceeec----cccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCH
Q 014232 300 GENGCVVKWAPQ-KDVLSHIAVGGFWSH----CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEK 374 (428)
Q Consensus 300 ~~~~~v~~~~pq-~~iL~~~~~~~~itH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 374 (428)
.+++.+.++..+ .+++..+++ +|.- |--++++||+++|+|+|+....+ ....+ .+ +.|..... -+.
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~~~-~~~ 318 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLSLD-ESP 318 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEeCC-CCH
Confidence 356777777544 368888888 6653 33578999999999999865544 33334 33 55544442 457
Q ss_pred HHHHHHHHHHhcCc
Q 014232 375 GEVEKAVKQLMVEK 388 (428)
Q Consensus 375 ~~l~~ai~~vl~~~ 388 (428)
++++++|.+++++.
T Consensus 319 ~~~a~~i~~l~~~~ 332 (358)
T cd03812 319 EIWAEEILKLKSED 332 (358)
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999999983
No 91
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.98 E-value=0.00013 Score=69.69 Aligned_cols=136 Identities=19% Similarity=0.250 Sum_probs=75.3
Q ss_pred CCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHh---h---CCCceEEeecChH
Q 014232 239 APNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEA---V---GENGCVVKWAPQK 312 (428)
Q Consensus 239 ~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~---~---~~~~~v~~~~pq~ 312 (428)
+++.++|.||.+....+++.++...+-|++.+...+|....+.. . ..++.+. . ++++.+.++.|+.
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-~-------~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ 353 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPAS-G-------EARLRRRFAAHGVDPDRIIFSPVAPRE 353 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT-H-------HHHHHHHHHHTTS-GGGEEEEE---HH
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-H-------HHHHHHHHHHcCCChhhEEEcCCCCHH
Confidence 45679999999999999999999999999999989998765321 0 1222211 1 2466778888876
Q ss_pred hhh---ccCCcCcee---eccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHH-HHHHHHHHh
Q 014232 313 DVL---SHIAVGGFW---SHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGE-VEKAVKQLM 385 (428)
Q Consensus 313 ~iL---~~~~~~~~i---tHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~-l~~ai~~vl 385 (428)
+-| ...++ ++ ..+|.+|++|||+.|||+|.+|--.=.-..++-+-..+|+.--+- -+.++ +..|+ ++-
T Consensus 354 ehl~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA--~s~~eYv~~Av-~La 428 (468)
T PF13844_consen 354 EHLRRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA--DSEEEYVEIAV-RLA 428 (468)
T ss_dssp HHHHHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB---SSHHHHHHHHH-HHH
T ss_pred HHHHHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC--CCHHHHHHHHH-HHh
Confidence 544 44666 54 567999999999999999999854333333332323356653332 23444 55666 465
Q ss_pred cC
Q 014232 386 VE 387 (428)
Q Consensus 386 ~~ 387 (428)
+|
T Consensus 429 ~D 430 (468)
T PF13844_consen 429 TD 430 (468)
T ss_dssp H-
T ss_pred CC
Confidence 66
No 92
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.96 E-value=8.2e-05 Score=70.61 Aligned_cols=157 Identities=10% Similarity=0.146 Sum_probs=92.9
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhC-----CCCeEEEEcCCCCCCCccccCCchhHHHhh--CCCceEEeecChH--
Q 014232 242 SVLYVSLGSIVSMDKKELKEMAWGLYNS-----KQPFLWVLRPSSTSASSGIELLPEGFEEAV--GENGCVVKWAPQK-- 312 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~~~~~~~~al~~~-----~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~v~~~~pq~-- 312 (428)
.+++++++-.... ...+..+++|+... +.++++..+++.. .-..+.+.. .+++.+.+.+++.
T Consensus 198 ~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 198 RYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNPV--------VREPLHKHLGDSKRVHLIEPLEYLDF 268 (365)
T ss_pred CEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCChH--------HHHHHHHHhCCCCCEEEECCCChHHH
Confidence 4666655432221 13366677777653 3455654333210 111122222 2567777766654
Q ss_pred -hhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCchhH
Q 014232 313 -DVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKEGQ 391 (428)
Q Consensus 313 -~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~~~ 391 (428)
.++.++++ +|+-.|. .+.||+++|+|+|.++-.++++. +.+ .|.+..+. -+++++.+++.+++++ +
T Consensus 269 ~~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~-~g~~~lv~--~d~~~i~~ai~~ll~~---~ 335 (365)
T TIGR00236 269 LNLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVE-AGTNKLVG--TDKENITKAAKRLLTD---P 335 (365)
T ss_pred HHHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HHh-cCceEEeC--CCHHHHHHHHHHHHhC---h
Confidence 56788888 9998764 47999999999999876665553 223 37776554 4789999999999988 5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 014232 392 EMRQRAKNLKEDVELCIKESGSSSSSLNKFLEF 424 (428)
Q Consensus 392 ~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 424 (428)
..+++...-...+ .+++.+.+.++.+.++
T Consensus 336 ~~~~~~~~~~~~~----g~~~a~~ri~~~l~~~ 364 (365)
T TIGR00236 336 DEYKKMSNASNPY----GDGEASERIVEELLNH 364 (365)
T ss_pred HHHHHhhhcCCCC----cCchHHHHHHHHHHhh
Confidence 5554443322222 2455555555555543
No 93
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.95 E-value=0.00031 Score=67.60 Aligned_cols=114 Identities=12% Similarity=0.198 Sum_probs=77.4
Q ss_pred CCCceEEeecChHh---hhccCCcCceeec---------ccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEE
Q 014232 300 GENGCVVKWAPQKD---VLSHIAVGGFWSH---------CGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGL 366 (428)
Q Consensus 300 ~~~~~v~~~~pq~~---iL~~~~~~~~itH---------gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~ 366 (428)
.+++.+.+|+|+.+ ++..+++ ||.- -|. ++++||+.+|+|+|+....+ ....+.+ -..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~-~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEA-DKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcC-CCceE
Confidence 35678889999875 6788888 7753 345 56899999999999875433 3334433 24677
Q ss_pred EcCCccCHHHHHHHHHHHhc-Cch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhcC
Q 014232 367 QLENDLEKGEVEKAVKQLMV-EKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNLF 428 (428)
Q Consensus 367 ~l~~~~~~~~l~~ai~~vl~-~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 428 (428)
.++. -+.+++.++|.++++ |.+ ..++.+++++. + ++.=+....++++.+.+++|
T Consensus 351 lv~~-~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~---v----~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 351 LVPE-NDAQALAQRLAAFSQLDTDELAPVVKRAREK---V----ETDFNQQVINRELASLLQAL 406 (406)
T ss_pred EeCC-CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHH---H----HHhcCHHHHHHHHHHHHhhC
Confidence 7763 589999999999998 732 23344444332 2 24455677777777777654
No 94
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.88 E-value=0.00064 Score=65.52 Aligned_cols=160 Identities=18% Similarity=0.188 Sum_probs=92.2
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHhC-----CCCeEEEEcCCCCCCCccccCCchhHHHh-----hCCCceEEeecC
Q 014232 241 NSVLYVSLGSIVSMDKKELKEMAWGLYNS-----KQPFLWVLRPSSTSASSGIELLPEGFEEA-----VGENGCVVKWAP 310 (428)
Q Consensus 241 ~~vv~vsfGS~~~~~~~~~~~~~~al~~~-----~~~~iw~~~~~~~~~~~~~~~~p~~~~~~-----~~~~~~v~~~~p 310 (428)
+...++++|.+... ..+..+++++... +.++.|.+-+++. ..+.+.+. ...++.+.+|++
T Consensus 229 ~~~~il~~Grl~~~--Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--------~~~~l~~~~~~~~~~~~V~f~G~v~ 298 (407)
T cd04946 229 DTLRIVSCSYLVPV--KRVDLIIKALAALAKARPSIKIKWTHIGGGP--------LEDTLKELAESKPENISVNFTGELS 298 (407)
T ss_pred CCEEEEEeeccccc--cCHHHHHHHHHHHHHhCCCceEEEEEEeCch--------HHHHHHHHHHhcCCCceEEEecCCC
Confidence 34567778877652 1133344444332 2366665544321 11222211 124567889999
Q ss_pred hHh---hhccCCcCceeeccc----cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHH
Q 014232 311 QKD---VLSHIAVGGFWSHCG----WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQ 383 (428)
Q Consensus 311 q~~---iL~~~~~~~~itHgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~ 383 (428)
+.+ ++..+++.+||...- -++++||+++|+|+|+.... .....+.+ -+.|..+...-+.+++.++|.+
T Consensus 299 ~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i~~-~~~G~l~~~~~~~~~la~~I~~ 373 (407)
T cd04946 299 NSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----GTPEIVDN-GGNGLLLSKDPTPNELVSSLSK 373 (407)
T ss_pred hHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----CcHHHhcC-CCcEEEeCCCCCHHHHHHHHHH
Confidence 875 444433333776543 35899999999999986543 34555543 2488887755688999999999
Q ss_pred HhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 014232 384 LMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFL 422 (428)
Q Consensus 384 vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 422 (428)
+++|++ ..+++++|++.- +++=+.....++|+
T Consensus 374 ll~~~~~~~~m~~~ar~~~-------~~~f~~~~~~~~~~ 406 (407)
T cd04946 374 FIDNEEEYQTMREKAREKW-------EENFNASKNYREFA 406 (407)
T ss_pred HHhCHHHHHHHHHHHHHHH-------HHHcCHHHhHHHhc
Confidence 998733 334444444332 23444555555443
No 95
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.87 E-value=0.022 Score=58.10 Aligned_cols=93 Identities=18% Similarity=0.203 Sum_probs=62.0
Q ss_pred CCCceEEeecChH-hhhccCCcCceee---cccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC-ccC
Q 014232 300 GENGCVVKWAPQK-DVLSHIAVGGFWS---HCGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN-DLE 373 (428)
Q Consensus 300 ~~~~~v~~~~pq~-~iL~~~~~~~~it---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~-~~~ 373 (428)
.+++.+.+|.++. .+|..+++ ||. +.|+ ++++||+.+|+|+|+.... .....|.+ -..|+.++. ..+
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~d-g~~GlLv~~~d~~ 645 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQE-GVTGLTLPADTVT 645 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccC-CCCEEEeCCCCCC
Confidence 3677888887754 57888888 765 5565 6899999999999987653 23344533 246887764 566
Q ss_pred HHHHHHHHHHHhcCch-hHHHHHHHHH
Q 014232 374 KGEVEKAVKQLMVEKE-GQEMRQRAKN 399 (428)
Q Consensus 374 ~~~l~~ai~~vl~~~~-~~~~~~~a~~ 399 (428)
.+++.+++.+++.+.. .+.+++++++
T Consensus 646 ~~~La~aL~~ll~~l~~~~~l~~~ar~ 672 (694)
T PRK15179 646 APDVAEALARIHDMCAADPGIARKAAD 672 (694)
T ss_pred hHHHHHHHHHHHhChhccHHHHHHHHH
Confidence 6677777766654311 1566665544
No 96
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.73 E-value=0.013 Score=54.56 Aligned_cols=99 Identities=18% Similarity=0.171 Sum_probs=72.7
Q ss_pred CceEEeecChH-hhhccCCc----CceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHH
Q 014232 302 NGCVVKWAPQK-DVLSHIAV----GGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGE 376 (428)
Q Consensus 302 ~~~v~~~~pq~-~iL~~~~~----~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~ 376 (428)
++++.+-+=-. .+++-+++ |-|+-+||.| .+|++++|+|+|.-|...-|.+-++++.+ .|.|+.++. ++.
T Consensus 301 dV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~-~ga~~~v~~---~~~ 375 (419)
T COG1519 301 DVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQ-AGAGLQVED---ADL 375 (419)
T ss_pred cEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHh-cCCeEEECC---HHH
Confidence 34455444333 23344443 3466699998 68999999999999999999999999987 499999884 888
Q ss_pred HHHHHHHHhcCch-hHHHHHHHHHHHHHHH
Q 014232 377 VEKAVKQLMVEKE-GQEMRQRAKNLKEDVE 405 (428)
Q Consensus 377 l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~ 405 (428)
|.+++..++.|++ ...|.+++.++-+..+
T Consensus 376 l~~~v~~l~~~~~~r~~~~~~~~~~v~~~~ 405 (419)
T COG1519 376 LAKAVELLLADEDKREAYGRAGLEFLAQNR 405 (419)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhh
Confidence 9999988888744 4556666665555544
No 97
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.72 E-value=0.043 Score=52.22 Aligned_cols=124 Identities=17% Similarity=0.183 Sum_probs=70.6
Q ss_pred EEEEEeccccc-CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHh---hhccC
Q 014232 243 VLYVSLGSIVS-MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKD---VLSHI 318 (428)
Q Consensus 243 vv~vsfGS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~---iL~~~ 318 (428)
.+++.+|++.. .+.+.+..++.. ..+.++++ +|...... + .... ...+|+.+.+++|+.+ +|.++
T Consensus 206 ~~i~y~G~l~~~~d~~ll~~la~~--~p~~~~vl-iG~~~~~~-~-----~~~~--~~~~nV~~~G~~~~~~l~~~l~~~ 274 (373)
T cd04950 206 PVIGYYGAIAEWLDLELLEALAKA--RPDWSFVL-IGPVDVSI-D-----PSAL--LRLPNVHYLGPKPYKELPAYLAGF 274 (373)
T ss_pred CEEEEEeccccccCHHHHHHHHHH--CCCCEEEE-ECCCcCcc-C-----hhHh--ccCCCEEEeCCCCHHHHHHHHHhC
Confidence 46666888875 333333333321 23455554 34321000 0 0111 1136889999999776 57788
Q ss_pred CcCcee------ecccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 319 AVGGFW------SHCGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 319 ~~~~~i------tHgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
++..+- +.++. +.++|++++|+|+|..++ ...+ +..+.+.... -+.+++.++|.+++.+
T Consensus 275 Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~~~~~~~--~d~~~~~~ai~~~l~~ 340 (373)
T cd04950 275 DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYEDEVVLIA--DDPEEFVAAIEKALLE 340 (373)
T ss_pred CEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcCcEEEeC--CCHHHHHHHHHHHHhc
Confidence 883321 22333 458999999999998763 1222 2223233333 3799999999997765
No 98
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.70 E-value=0.00054 Score=52.57 Aligned_cols=107 Identities=16% Similarity=0.132 Sum_probs=68.2
Q ss_pred EEEEecccccCCHHHHH--HHHHHHHhCCCCeEEEEcCCCCCCCccccCCc-hhHHHhhCCCceEEeecC---hHhhhcc
Q 014232 244 LYVSLGSIVSMDKKELK--EMAWGLYNSKQPFLWVLRPSSTSASSGIELLP-EGFEEAVGENGCVVKWAP---QKDVLSH 317 (428)
Q Consensus 244 v~vsfGS~~~~~~~~~~--~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~v~~~~p---q~~iL~~ 317 (428)
+||+-||....=..... ++..-.+.-..++|..+|.++. .| .+. .+.+|.- -+.+...
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~--------kpvagl--------~v~~F~~~~kiQsli~d 65 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDI--------KPVAGL--------RVYGFDKEEKIQSLIHD 65 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCc--------cccccc--------EEEeechHHHHHHHhhc
Confidence 78999998441111111 1222222233478888887531 23 222 4444433 2346677
Q ss_pred CCcCceeeccccchhHHhhhcCCceecccccc--------chhhhHHHHhhhheeEEEcC
Q 014232 318 IAVGGFWSHCGWNSTLESICEGVPMICRPGFG--------DQRVSARYVSHVWRIGLQLE 369 (428)
Q Consensus 318 ~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~--------DQ~~na~~v~~~~g~g~~l~ 369 (428)
+++ +|+|+|.||++.++..++|.+++|--. .|-.-|..+++ ++.=+...
T Consensus 66 arI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~s 122 (161)
T COG5017 66 ARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACS 122 (161)
T ss_pred ceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEc
Confidence 787 999999999999999999999999643 47777877766 57666655
No 99
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.69 E-value=0.015 Score=56.31 Aligned_cols=72 Identities=11% Similarity=0.180 Sum_probs=51.2
Q ss_pred EEeecChHhhhccCCcCceeeccc----cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHH
Q 014232 305 VVKWAPQKDVLSHIAVGGFWSHCG----WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKA 380 (428)
Q Consensus 305 v~~~~pq~~iL~~~~~~~~itHgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~a 380 (428)
+.++.+..+++...++ ||.-+- -++++||+++|+|+|+.-..+ + ..+.+ -+.|...+ +.+++.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~-~~ng~~~~---~~~~~a~a 356 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQ-FPNCRTYD---DGKGFVRA 356 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeec-CCceEecC---CHHHHHHH
Confidence 3466666779999988 987743 368999999999999875432 2 22322 24454443 68899999
Q ss_pred HHHHhcC
Q 014232 381 VKQLMVE 387 (428)
Q Consensus 381 i~~vl~~ 387 (428)
+.++|.+
T Consensus 357 i~~~l~~ 363 (462)
T PLN02846 357 TLKALAE 363 (462)
T ss_pred HHHHHcc
Confidence 9999986
No 100
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.66 E-value=0.002 Score=59.17 Aligned_cols=212 Identities=17% Similarity=0.183 Sum_probs=114.6
Q ss_pred hhhhHHHHHHHHhhCCCCcceec-cCCCCCCCCCCCCccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHH
Q 014232 189 NCIEQSSLSQLQQQCNIPIFPVG-PLHKFAPSSPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLY 267 (428)
Q Consensus 189 ~~le~~~l~~~~~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~ 267 (428)
.-+|+..++. ++.++.||| |+....+- .+......+-+....++.++.+--||...--...+..+.++.+
T Consensus 144 lPFE~~~y~k----~g~~~~yVGHpl~d~i~~-----~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~ 214 (381)
T COG0763 144 LPFEPAFYDK----FGLPCTYVGHPLADEIPL-----LPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQ 214 (381)
T ss_pred cCCCHHHHHh----cCCCeEEeCChhhhhccc-----cccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHH
Confidence 3456554332 456699999 66554321 1111112222322345678999999987622222222333332
Q ss_pred h-----CCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCc-eEEeec-Ch--HhhhccCCcCceeeccccchhHHhhhc
Q 014232 268 N-----SKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENG-CVVKWA-PQ--KDVLSHIAVGGFWSHCGWNSTLESICE 338 (428)
Q Consensus 268 ~-----~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~v~~~~-pq--~~iL~~~~~~~~itHgG~~s~~eal~~ 338 (428)
+ .+.+|+.-+-....+ .+-..+ ...+. ...-++ ++ .+++..+++ .+.-+|-. ++|+..+
T Consensus 215 ~l~~~~~~~~~vlp~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~aD~--al~aSGT~-tLE~aL~ 282 (381)
T COG0763 215 ELKARYPDLKFVLPLVNAKYR------RIIEEA---LKWEVAGLSLILIDGEKRKAFAAADA--ALAASGTA-TLEAALA 282 (381)
T ss_pred HHHhhCCCceEEEecCcHHHH------HHHHHH---hhccccCceEEecCchHHHHHHHhhH--HHHhccHH-HHHHHHh
Confidence 2 346776654332100 001111 11111 111122 11 246777777 77777754 6899999
Q ss_pred CCceeccccc-cchhhhHHHHhhhhee--------EEEc-----CCccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHH
Q 014232 339 GVPMICRPGF-GDQRVSARYVSHVWRI--------GLQL-----ENDLEKGEVEKAVKQLMVEKE-GQEMRQRAKNLKED 403 (428)
Q Consensus 339 GvP~v~~P~~-~DQ~~na~~v~~~~g~--------g~~l-----~~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~ 403 (428)
|+|||+.=-. .=-+.-+++... ... |..+ .+..+++.|.+++..++.|+. ...+++...++++.
T Consensus 283 g~P~Vv~Yk~~~it~~iak~lvk-~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~ 361 (381)
T COG0763 283 GTPMVVAYKVKPITYFIAKRLVK-LPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQY 361 (381)
T ss_pred CCCEEEEEeccHHHHHHHHHhcc-CCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHH
Confidence 9999985110 011222344333 121 1111 125889999999999999853 45677777777777
Q ss_pred HHHHHhcCCChHHHHHHHHHHhh
Q 014232 404 VELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 404 ~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
++ +++.++.+++.+++.+.
T Consensus 362 l~----~~~~~e~aA~~vl~~~~ 380 (381)
T COG0763 362 LR----EDPASEIAAQAVLELLL 380 (381)
T ss_pred Hc----CCcHHHHHHHHHHHHhc
Confidence 76 66788888888888764
No 101
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.64 E-value=0.00071 Score=56.50 Aligned_cols=91 Identities=21% Similarity=0.291 Sum_probs=65.3
Q ss_pred CCCceEEeecChH---hhhccCCcCceeec----cccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCcc
Q 014232 300 GENGCVVKWAPQK---DVLSHIAVGGFWSH----CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDL 372 (428)
Q Consensus 300 ~~~~~v~~~~pq~---~iL~~~~~~~~itH----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 372 (428)
.+++.+.++.++. .++..+++ +|+. |.-+++.||+.+|+|+|+. |...+...+.+ ...|..++. .
T Consensus 72 ~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~-~~~g~~~~~-~ 143 (172)
T PF00534_consen 72 KENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIIND-GVNGFLFDP-N 143 (172)
T ss_dssp GTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGT-TTSEEEEST-T
T ss_pred ccccccccccccccccccccccee--ccccccccccccccccccccccceeec----cccCCceeecc-ccceEEeCC-C
Confidence 4678899999833 47888888 8876 4557999999999999974 45555556644 467888886 4
Q ss_pred CHHHHHHHHHHHhcCch-hHHHHHHHH
Q 014232 373 EKGEVEKAVKQLMVEKE-GQEMRQRAK 398 (428)
Q Consensus 373 ~~~~l~~ai~~vl~~~~-~~~~~~~a~ 398 (428)
+.+++.++|.+++.+++ ...+.++++
T Consensus 144 ~~~~l~~~i~~~l~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 144 DIEELADAIEKLLNDPELRQKLGKNAR 170 (172)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 99999999999999833 334444443
No 102
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.61 E-value=0.0093 Score=58.77 Aligned_cols=194 Identities=14% Similarity=0.174 Sum_probs=102.3
Q ss_pred hhhhHHHHHHHHhhCCCCcceec-cCCCCCCCCCCCCccccchhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHH
Q 014232 189 NCIEQSSLSQLQQQCNIPIFPVG-PLHKFAPSSPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLY 267 (428)
Q Consensus 189 ~~le~~~l~~~~~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~ 267 (428)
..+|.+.+. + .+.++.+|| |+....+. .+...+..+-+.-.+++++|-+=-||...-=...+-.++++.+
T Consensus 369 fPFE~~~y~---~-~gv~v~yVGHPL~d~i~~-----~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~ 439 (608)
T PRK01021 369 LPFEQNLFK---D-SPLRTVYLGHPLVETISS-----FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFL 439 (608)
T ss_pred CccCHHHHH---h-cCCCeEEECCcHHhhccc-----CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 345655433 2 467899999 77664321 1111112222222235678999999987633444555666665
Q ss_pred --hC--CCCeEEEEcCCCCCCCccccCCchhHHHhhCC-C---ceEEeecChHhhhccCCcCceeeccccchhHHhhhcC
Q 014232 268 --NS--KQPFLWVLRPSSTSASSGIELLPEGFEEAVGE-N---GCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEG 339 (428)
Q Consensus 268 --~~--~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~-~---~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~G 339 (428)
.. +.+|+....... ..+.+.+...+ + +.++.--...+++..+++ .+.-+|- -|+|+...|
T Consensus 440 ~~~l~~~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL~g 507 (608)
T PRK01021 440 ASSLASTHQLLVSSANPK---------YDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETALNQ 507 (608)
T ss_pred HHHhccCeEEEEecCchh---------hHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHHhC
Confidence 33 345554322110 11222222211 1 122211012578999998 8888886 468999999
Q ss_pred Cceeccc-cccchhhhHHHHhhh----he-----eEEEc----C---CccCHHHHHHHHHHHhcCch-hHHHHHHHHHHH
Q 014232 340 VPMICRP-GFGDQRVSARYVSHV----WR-----IGLQL----E---NDLEKGEVEKAVKQLMVEKE-GQEMRQRAKNLK 401 (428)
Q Consensus 340 vP~v~~P-~~~DQ~~na~~v~~~----~g-----~g~~l----~---~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~ 401 (428)
+|||++= ...=-+.-++++.+- .+ +|..+ - ...|++.|.+++ ++|.|++ .+++++..++++
T Consensus 508 ~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr 586 (608)
T PRK01021 508 TPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDLY 586 (608)
T ss_pred CCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHH
Confidence 9999952 111122334555430 00 11111 1 257899999997 7887733 345555555555
Q ss_pred HHH
Q 014232 402 EDV 404 (428)
Q Consensus 402 ~~~ 404 (428)
+.+
T Consensus 587 ~~L 589 (608)
T PRK01021 587 QAM 589 (608)
T ss_pred HHh
Confidence 555
No 103
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.58 E-value=0.0023 Score=60.48 Aligned_cols=129 Identities=19% Similarity=0.237 Sum_probs=79.4
Q ss_pred CcEEEEEecccc--c-CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhh--CCCceEEeecChH---
Q 014232 241 NSVLYVSLGSIV--S-MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAV--GENGCVVKWAPQK--- 312 (428)
Q Consensus 241 ~~vv~vsfGS~~--~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~v~~~~pq~--- 312 (428)
++.|+|++=... . .+.+.+..+++++.+.+.++++.+...+ .+. ..+-..+.+.. .+|+.+.+-++..
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~-p~~---~~i~~~i~~~~~~~~~v~l~~~l~~~~~l 276 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNAD-AGS---RIINEAIEEYVNEHPNFRLFKSLGQERYL 276 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCC-CCc---hHHHHHHHHHhcCCCCEEEECCCChHHHH
Confidence 458888885543 3 4567789999999887766666543221 110 00111122211 3567777655544
Q ss_pred hhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEE-cCCccCHHHHHHHHHHHhc
Q 014232 313 DVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQ-LENDLEKGEVEKAVKQLMV 386 (428)
Q Consensus 313 ~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~-l~~~~~~~~l~~ai~~vl~ 386 (428)
.++.++++ +||.++.|- .||...|+|.|.+- +-+ .-+ + .|..+. + ..+++++.+++.++++
T Consensus 277 ~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~~-~-~g~nvl~v--g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 277 SLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KGR-L-RADSVIDV--DPDKEEIVKAIEKLLD 338 (365)
T ss_pred HHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hhh-h-hcCeEEEe--CCCHHHHHHHHHHHhC
Confidence 57889999 999885555 99999999999773 311 111 2 243332 3 3678999999998543
No 104
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.49 E-value=0.0015 Score=57.13 Aligned_cols=140 Identities=16% Similarity=0.098 Sum_probs=99.2
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhC--CCceEEeecC-hHhhhccCC
Q 014232 243 VLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVG--ENGCVVKWAP-QKDVLSHIA 319 (428)
Q Consensus 243 vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~v~~~~p-q~~iL~~~~ 319 (428)
=|+|++|-.- +....-.++..+.+.++.+-++++.. .+-+.+..++.. +|........ -..++..++
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~--------~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d 229 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSS--------NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEAD 229 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCC--------CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcc
Confidence 4999998652 44456678888888776665666632 113345544443 4444443332 446999999
Q ss_pred cCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCchhHHHHHHHHH
Q 014232 320 VGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKEGQEMRQRAKN 399 (428)
Q Consensus 320 ~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~ 399 (428)
+ .|+-+|. |+.|++.-|+|.+++|+...|---|...+. +|+-..+.-.++.....--+.+++.| ...|++.-.
T Consensus 230 ~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~~~l~~~~~~~~~~~i~~d---~~~rk~l~~ 302 (318)
T COG3980 230 L--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLGYHLKDLAKDYEILQIQKD---YARRKNLSF 302 (318)
T ss_pred h--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhccCCCchHHHHHHHHHhhhC---HHHhhhhhh
Confidence 9 9999886 899999999999999999999999999966 68877776447777777777788888 555555433
No 105
>PRK10125 putative glycosyl transferase; Provisional
Probab=97.48 E-value=0.11 Score=49.95 Aligned_cols=114 Identities=12% Similarity=0.059 Sum_probs=64.2
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCCe-EEEEcCCCCCCCccccCCchhHHHhhCCCceEEeec-Ch---HhhhccC
Q 014232 244 LYVSLGSIVSMDKKELKEMAWGLYNSKQPF-LWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWA-PQ---KDVLSHI 318 (428)
Q Consensus 244 v~vsfGS~~~~~~~~~~~~~~al~~~~~~~-iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~-pq---~~iL~~~ 318 (428)
+++..|.....+......+++|+...+.++ ++.+|... .. .+ .++...++. ++ .+++..+
T Consensus 243 ~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~-~~------~~--------~~v~~~g~~~~~~~l~~~y~~a 307 (405)
T PRK10125 243 KIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFS-PF------TA--------GNVVNHGFETDKRKLMSALNQM 307 (405)
T ss_pred EEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCC-cc------cc--------cceEEecCcCCHHHHHHHHHhC
Confidence 444455433222233466888888765443 34445321 00 11 222444554 22 3456667
Q ss_pred CcCceeecc---c-cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHH
Q 014232 319 AVGGFWSHC---G-WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAV 381 (428)
Q Consensus 319 ~~~~~itHg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai 381 (428)
++ ||.-. | -++++||+++|+|+|+....+ ... +..+ +.|..++. -+.++|++++
T Consensus 308 Dv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~E-iv~~-~~G~lv~~-~d~~~La~~~ 365 (405)
T PRK10125 308 DA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA----ARE-VLQK-SGGKTVSE-EEVLQLAQLS 365 (405)
T ss_pred CE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHH-hEeC-CcEEEECC-CCHHHHHhcc
Confidence 77 77643 2 368999999999999987765 222 3343 56877764 4677777643
No 106
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.47 E-value=0.0038 Score=59.71 Aligned_cols=164 Identities=19% Similarity=0.198 Sum_probs=91.4
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhC--CCCeEEEEcCCCCCCCccccCCchhHHHhh------CCCceE-EeecChH
Q 014232 242 SVLYVSLGSIVSMDKKELKEMAWGLYNS--KQPFLWVLRPSSTSASSGIELLPEGFEEAV------GENGCV-VKWAPQK 312 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~------~~~~~v-~~~~pq~ 312 (428)
..+++..|.... ......++++++.. +.++++..++.... .+-+.+.+.. ..++.. .+++++.
T Consensus 201 ~~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (388)
T TIGR02149 201 RPYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDTP------EVAEEVRQAVALLDRNRTGIIWINKMLPKE 272 (388)
T ss_pred ceEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCcH------HHHHHHHHHHHHhccccCceEEecCCCCHH
Confidence 356666777653 23355566676664 34555544432110 0111222111 123443 3677765
Q ss_pred h---hhccCCcCceeec---cc-cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC-ccC----HHHHHHH
Q 014232 313 D---VLSHIAVGGFWSH---CG-WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN-DLE----KGEVEKA 380 (428)
Q Consensus 313 ~---iL~~~~~~~~itH---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~-~~~----~~~l~~a 380 (428)
+ ++.++++ ||.- -| -.+++||+++|+|+|+.... .....+.+ -..|..++. ..+ .+++.++
T Consensus 273 ~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~-~~~G~~~~~~~~~~~~~~~~l~~~ 345 (388)
T TIGR02149 273 ELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVD-GETGFLVPPDNSDADGFQAELAKA 345 (388)
T ss_pred HHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhC-CCceEEcCCCCCcccchHHHHHHH
Confidence 4 6888998 7753 23 34779999999999987543 34455544 357887764 221 2899999
Q ss_pred HHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 381 VKQLMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 381 i~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
|.++++|++ .+++.+++++.. . +.=+-...++++++.+++
T Consensus 346 i~~l~~~~~~~~~~~~~a~~~~---~----~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 346 INILLADPELAKKMGIAGRKRA---E----EEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHhCHHHHHHHHHHHHHHH---H----HhCCHHHHHHHHHHHHHh
Confidence 999998833 234444444322 1 233455556666665543
No 107
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.39 E-value=0.0053 Score=57.79 Aligned_cols=108 Identities=10% Similarity=0.087 Sum_probs=66.2
Q ss_pred CCceEEeecCh-HhhhccCCcCceeeccc----cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHH
Q 014232 301 ENGCVVKWAPQ-KDVLSHIAVGGFWSHCG----WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKG 375 (428)
Q Consensus 301 ~~~~v~~~~pq-~~iL~~~~~~~~itHgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~ 375 (428)
+|+.+.++..+ .++|..+++ +|.-.. -++++||+.+|+|+|+. |...+...+.+ .|..+ . .-+.+
T Consensus 245 ~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~-~g~~~--~-~~~~~ 314 (360)
T cd04951 245 NRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD-SGLIV--P-ISDPE 314 (360)
T ss_pred CcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC-CceEe--C-CCCHH
Confidence 56777777654 368888888 665432 46899999999999974 44445555533 34443 3 25788
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 014232 376 EVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEF 424 (428)
Q Consensus 376 ~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 424 (428)
++.+++.++++++ +.+++....-++.+. +.=+-...++++.+.
T Consensus 315 ~~~~~i~~ll~~~--~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~ 357 (360)
T cd04951 315 ALANKIDEILKMS--GEERDIIGARRERIV----KKFSINSIVQQWLTL 357 (360)
T ss_pred HHHHHHHHHHhCC--HHHHHHHHHHHHHHH----HhcCHHHHHHHHHHH
Confidence 9999999998432 344433333233333 333444455555443
No 108
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.38 E-value=0.0096 Score=57.22 Aligned_cols=108 Identities=17% Similarity=0.165 Sum_probs=70.9
Q ss_pred CCceEEeecChH-hhhccCCcCcee--ec--ccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCH
Q 014232 301 ENGCVVKWAPQK-DVLSHIAVGGFW--SH--CGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEK 374 (428)
Q Consensus 301 ~~~~v~~~~pq~-~iL~~~~~~~~i--tH--gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 374 (428)
+++.+.+++++. .++.++++ || ++ .|. +.+.||+.+|+|+|+.+...+.- ... -|.|+.+. -+.
T Consensus 280 ~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~-~~~g~lv~--~~~ 349 (397)
T TIGR03087 280 PGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DAL-PGAELLVA--ADP 349 (397)
T ss_pred CCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----ccc-CCcceEeC--CCH
Confidence 567888999864 57889998 66 32 455 36999999999999987643221 112 26676665 588
Q ss_pred HHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 014232 375 GEVEKAVKQLMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFF 425 (428)
Q Consensus 375 ~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 425 (428)
+++.++|.++++|.+ ..++.+++++.. .+.=+-...++++.+.+
T Consensus 350 ~~la~ai~~ll~~~~~~~~~~~~ar~~v-------~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 350 ADFAAAILALLANPAEREELGQAARRRV-------LQHYHWPRNLARLDALL 394 (397)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHh
Confidence 999999999999833 334444444332 13344555555555544
No 109
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.38 E-value=0.00064 Score=54.23 Aligned_cols=127 Identities=20% Similarity=0.206 Sum_probs=66.7
Q ss_pred EEEEEeccccc-CCHHHHHH-HHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChH-hhhccCC
Q 014232 243 VLYVSLGSIVS-MDKKELKE-MAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQK-DVLSHIA 319 (428)
Q Consensus 243 vv~vsfGS~~~-~~~~~~~~-~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~-~iL~~~~ 319 (428)
+.++++|+... ...+.+-. +++.+.+...++-+.+-+. -|+.+.+...+|+.+.+|++.. +++..++
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~----------~~~~l~~~~~~~v~~~g~~~e~~~~l~~~d 72 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGN----------GPDELKRLRRPNVRFHGFVEELPEILAAAD 72 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECE----------SS-HHCCHHHCTEEEE-S-HHHHHHHHC-S
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeC----------CHHHHHHhcCCCEEEcCCHHHHHHHHHhCC
Confidence 45666666654 34443333 5555544322344433332 1222221124588899998644 5788999
Q ss_pred cCceeec--cc-cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 320 VGGFWSH--CG-WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 320 ~~~~itH--gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
+....+. -| -+++.|++.+|+|+|+.+.. ....++. .+.|..+. -+++++.+++.++++|
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~-~~~~~~~~--~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEE-DGCGVLVA--NDPEELAEAIERLLND 135 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE-T--T-HHHHHHHHHHHHH-
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheee-cCCeEEEC--CCHHHHHHHHHHHhcC
Confidence 9655442 23 38999999999999997661 2223323 37777773 5999999999999865
No 110
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.34 E-value=0.0045 Score=58.56 Aligned_cols=149 Identities=15% Similarity=0.186 Sum_probs=85.1
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCCCe-EEEEcCCCCCCCccccCCchhHHH-hhCCCceEEeecCh--H---hh
Q 014232 242 SVLYVSLGSIVSMDKKELKEMAWGLYNSKQPF-LWVLRPSSTSASSGIELLPEGFEE-AVGENGCVVKWAPQ--K---DV 314 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~-iw~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~v~~~~pq--~---~i 314 (428)
+.+++.+|.+.......+..+++++......+ ++.+|.+. .. +.+-.-..+ ...+++.+.+|+++ . +.
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~-~~----~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~ 254 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGS-DF----EKCKAYSRELGIEQRIIWHGWQSQPWEVVQQK 254 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCc-cH----HHHHHHHHHcCCCCeEEEecccCCcHHHHHHH
Confidence 35677788765423334566777776653333 22334321 00 001111111 12467888898754 2 24
Q ss_pred hccCCcCceeecc---c-cchhHHhhhcCCceeccc-cccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCch
Q 014232 315 LSHIAVGGFWSHC---G-WNSTLESICEGVPMICRP-GFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKE 389 (428)
Q Consensus 315 L~~~~~~~~itHg---G-~~s~~eal~~GvP~v~~P-~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~ 389 (428)
+..+++ +|... | -+++.||+++|+|+|+.- ..+ ....+.+ -..|..++. -+.+++.++|.+++++++
T Consensus 255 ~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~-~~~G~lv~~-~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 255 IKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKP-GLNGELYTP-GNIDEFVGKLNKVISGEV 326 (359)
T ss_pred HhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccC-CCceEEECC-CCHHHHHHHHHHHHhCcc
Confidence 555677 66432 2 479999999999999875 322 2234433 256777653 689999999999999854
Q ss_pred ---hHHHHHHHHHHHHH
Q 014232 390 ---GQEMRQRAKNLKED 403 (428)
Q Consensus 390 ---~~~~~~~a~~l~~~ 403 (428)
...++++++++.+.
T Consensus 327 ~~~~~~~~~~~~~~~~~ 343 (359)
T PRK09922 327 KYQHDAIPNSIERFYEV 343 (359)
T ss_pred cCCHHHHHHHHHHhhHH
Confidence 23344444444443
No 111
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.32 E-value=0.0057 Score=60.31 Aligned_cols=113 Identities=9% Similarity=0.137 Sum_probs=74.2
Q ss_pred CCceEEeecChHhhhccCCcCceee---cccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC---ccC
Q 014232 301 ENGCVVKWAPQKDVLSHIAVGGFWS---HCGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN---DLE 373 (428)
Q Consensus 301 ~~~~v~~~~pq~~iL~~~~~~~~it---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~---~~~ 373 (428)
+++.+.++.+..+++..+++ ||. .=|+ .+++||+++|+|+|+.-..+ .+...+... ..|..++. .-+
T Consensus 376 ~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g-~nG~lv~~~~~~~d 449 (500)
T TIGR02918 376 DYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDN-KNGYLIPIDEEEDD 449 (500)
T ss_pred CeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCC-CCEEEEeCCccccc
Confidence 45677788888899999998 775 3344 58999999999999865421 233344331 35666541 122
Q ss_pred ----HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 374 ----KGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 374 ----~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
.++++++|.++++++...+|.++|++.++.+ +....++.+.+.+++
T Consensus 450 ~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~f--------s~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 450 EDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEGF--------LTANIIEKWKKLVRE 499 (500)
T ss_pred hhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHhh
Confidence 7889999999996533456677776655544 355556565555544
No 112
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=97.25 E-value=0.0042 Score=60.07 Aligned_cols=137 Identities=18% Similarity=0.298 Sum_probs=89.1
Q ss_pred CCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHh------hCCCceEEeecChH
Q 014232 239 APNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEA------VGENGCVVKWAPQK 312 (428)
Q Consensus 239 ~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~------~~~~~~v~~~~pq~ 312 (428)
+++.|||.+|--....+++.++..++-|++.+..++|..+.+.... .+|... .++++.+.+-++..
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge--------~rf~ty~~~~Gl~p~riifs~va~k~ 827 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--------QRFRTYAEQLGLEPDRIIFSPVAAKE 827 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch--------HHHHHHHHHhCCCccceeeccccchH
Confidence 3456999999888889999999999999999999999988653211 223211 12445555555433
Q ss_pred h-----hhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHH-HHhhhheeEEEcCCccCHHHHHHHHHHHhc
Q 014232 313 D-----VLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSAR-YVSHVWRIGLQLENDLEKGEVEKAVKQLMV 386 (428)
Q Consensus 313 ~-----iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~-~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~ 386 (428)
+ .|..-.+.-+.+. |..|.++.|+.|||||.+|.-.--...|. .+.. +|+|-.+-+ -.+|-...+|+ +-+
T Consensus 828 eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~-~Gl~hliak-~~eEY~~iaV~-Lat 903 (966)
T KOG4626|consen 828 EHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTA-LGLGHLIAK-NREEYVQIAVR-LAT 903 (966)
T ss_pred HHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHH-cccHHHHhh-hHHHHHHHHHH-hhc
Confidence 3 2332223335555 78899999999999999998655444443 3333 688875443 33444555664 445
Q ss_pred C
Q 014232 387 E 387 (428)
Q Consensus 387 ~ 387 (428)
|
T Consensus 904 d 904 (966)
T KOG4626|consen 904 D 904 (966)
T ss_pred C
Confidence 5
No 113
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.23 E-value=0.014 Score=55.53 Aligned_cols=111 Identities=12% Similarity=0.147 Sum_probs=68.9
Q ss_pred CCceEEeecCh-HhhhccCCcCceee--c--cccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHH
Q 014232 301 ENGCVVKWAPQ-KDVLSHIAVGGFWS--H--CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKG 375 (428)
Q Consensus 301 ~~~~v~~~~pq-~~iL~~~~~~~~it--H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~ 375 (428)
.++.+.++..+ ..+|..+++ +|. + |--++++||+++|+|+|+....+ +...+.+ -..|..++. -+.+
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~-~~~g~~~~~-~d~~ 326 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQH-GVTGALVPP-GDAV 326 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcC-CCceEEeCC-CCHH
Confidence 34455554332 368889998 663 3 33469999999999999976533 4444433 256777663 5788
Q ss_pred HHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 376 EVEKAVKQLMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 376 ~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
++.++|.+++++++ ...+.+++++.. .+.=+....++++.+..+
T Consensus 327 ~la~~i~~l~~~~~~~~~~~~~a~~~~-------~~~fs~~~~~~~~~~~y~ 371 (374)
T TIGR03088 327 ALARALQPYVSDPAARRAHGAAGRARA-------EQQFSINAMVAAYAGLYD 371 (374)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHHH
Confidence 99999999998832 223344443322 133445556666655544
No 114
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=97.21 E-value=0.0019 Score=60.45 Aligned_cols=110 Identities=16% Similarity=0.301 Sum_probs=77.1
Q ss_pred CCCceEEeecChHhhh---ccCCcCceeec-------ccc------chhHHhhhcCCceeccccccchhhhHHHHhhhhe
Q 014232 300 GENGCVVKWAPQKDVL---SHIAVGGFWSH-------CGW------NSTLESICEGVPMICRPGFGDQRVSARYVSHVWR 363 (428)
Q Consensus 300 ~~~~~v~~~~pq~~iL---~~~~~~~~itH-------gG~------~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g 363 (428)
.+|+.+.+|+|+.++. .. +.+++... +.+ +-+.+.+++|+|+|+. ++...+..|++ .+
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~----~~~~~~~~V~~-~~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW----SKAAIADFIVE-NG 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC----CCccHHHHHHh-CC
Confidence 3567899999998764 33 33333221 111 1277789999999986 44566777766 58
Q ss_pred eEEEcCCccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 014232 364 IGLQLENDLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLE 423 (428)
Q Consensus 364 ~g~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 423 (428)
+|+.++ +.+++.+++.++ ++++..+|++|++++++.++ .|---..++++++.
T Consensus 280 ~G~~v~---~~~el~~~l~~~-~~~~~~~m~~n~~~~~~~~~----~g~~~~~~~~~~~~ 331 (333)
T PRK09814 280 LGFVVD---SLEELPEIIDNI-TEEEYQEMVENVKKISKLLR----NGYFTKKALVDAIK 331 (333)
T ss_pred ceEEeC---CHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHh----cchhHHHHHHHHHh
Confidence 999987 567899999875 44445689999999999998 45555666666554
No 115
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.01 E-value=0.0061 Score=57.90 Aligned_cols=99 Identities=14% Similarity=0.138 Sum_probs=66.6
Q ss_pred CCceEEeecChH-hhhccCCcCceeecc-c-cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHH
Q 014232 301 ENGCVVKWAPQK-DVLSHIAVGGFWSHC-G-WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEV 377 (428)
Q Consensus 301 ~~~~v~~~~pq~-~iL~~~~~~~~itHg-G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l 377 (428)
.++.+.++.++. .++..+++-.+.++. | -.+++||+++|+|+|+..... .....+.. -..|..++. -+.+++
T Consensus 261 ~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~-~~~G~lv~~-~d~~~l 335 (372)
T cd04949 261 DYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIED-GENGYLVPK-GDIEAL 335 (372)
T ss_pred ceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHccc-CCCceEeCC-CcHHHH
Confidence 456677766655 578898884444442 3 458999999999999864321 12334433 256777663 689999
Q ss_pred HHHHHHHhcCch-hHHHHHHHHHHHHHH
Q 014232 378 EKAVKQLMVEKE-GQEMRQRAKNLKEDV 404 (428)
Q Consensus 378 ~~ai~~vl~~~~-~~~~~~~a~~l~~~~ 404 (428)
.++|.+++++.+ ..++.+++++..+.+
T Consensus 336 a~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 336 AEAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 999999999853 455666666655444
No 116
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.82 E-value=0.07 Score=52.59 Aligned_cols=92 Identities=15% Similarity=0.248 Sum_probs=61.8
Q ss_pred CCCceEEeecChHhhhccCCcCceeecc---c-cchhHHhhhcCCceeccccccchhhhHHHHhhh----he-eEEEcCC
Q 014232 300 GENGCVVKWAPQKDVLSHIAVGGFWSHC---G-WNSTLESICEGVPMICRPGFGDQRVSARYVSHV----WR-IGLQLEN 370 (428)
Q Consensus 300 ~~~~~v~~~~pq~~iL~~~~~~~~itHg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~----~g-~g~~l~~ 370 (428)
.+|+.+.+...-.+++..+++ +|.-. | -++++||+++|+|+|+... ......+.+. +| .|..++.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHhcCCcccccCCceEEECC
Confidence 367778786666678888888 66443 3 3689999999999998543 3333344321 12 6776663
Q ss_pred ccCHHHHHHHHHHHhcCch-hHHHHHHHH
Q 014232 371 DLEKGEVEKAVKQLMVEKE-GQEMRQRAK 398 (428)
Q Consensus 371 ~~~~~~l~~ai~~vl~~~~-~~~~~~~a~ 398 (428)
.+.+++.++|.++++|++ ..++.++++
T Consensus 427 -~d~~~la~ai~~ll~~~~~~~~~~~~a~ 454 (475)
T cd03813 427 -ADPEALARAILRLLKDPELRRAMGEAGR 454 (475)
T ss_pred -CCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 688999999999999843 333444443
No 117
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.79 E-value=0.062 Score=51.06 Aligned_cols=111 Identities=16% Similarity=0.224 Sum_probs=70.3
Q ss_pred CCceEEeec--ChH---hhhccCCcCceeecc---cc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCc
Q 014232 301 ENGCVVKWA--PQK---DVLSHIAVGGFWSHC---GW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEND 371 (428)
Q Consensus 301 ~~~~v~~~~--pq~---~iL~~~~~~~~itHg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 371 (428)
+++.+.++. ++. .++..+++ |+.-. |+ .++.||+++|+|+|+....+ ....+.. -..|...+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~-~~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIED-GETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhccc-CCceEEeC--
Confidence 466777776 433 47788888 88644 33 49999999999999875432 2334433 25676554
Q ss_pred cCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhcC
Q 014232 372 LEKGEVEKAVKQLMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNLF 428 (428)
Q Consensus 372 ~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 428 (428)
+.+.+..+|.+++++++ .+++.+++++.. . +.=+-...++++++.++++
T Consensus 323 -~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~---~----~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 323 -TVEEAAVRILYLLRDPELRRKMGANAREHV---R----ENFLITRHLKDYLYLISKL 372 (372)
T ss_pred -CcHHHHHHHHHHHcCHHHHHHHHHHHHHHH---H----HHcCHHHHHHHHHHHHHhC
Confidence 45678889999998833 334444444422 1 2334666777777776654
No 118
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.78 E-value=0.02 Score=55.18 Aligned_cols=133 Identities=17% Similarity=0.207 Sum_probs=90.4
Q ss_pred CCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHH---HhhC---CCceEEeecChH
Q 014232 239 APNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFE---EAVG---ENGCVVKWAPQK 312 (428)
Q Consensus 239 ~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~---~~~~---~~~~v~~~~pq~ 312 (428)
+++.+||+||+-.....++.+..-.+-|+..+-.++|..++++.+. .-..++ ++.+ ++.++.+-.|..
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~------~~~~l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAE------INARLRDLAEREGVDSERLRFLPPAPNE 500 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHH------HHHHHHHHHHHcCCChhheeecCCCCCH
Confidence 4577999999999999999999999999999999999887752111 112221 2222 456677777755
Q ss_pred h---hhccCCcCcee---eccccchhHHhhhcCCceeccccccchhh--hHHHHhhhheeEEEcCCccCHHHHHHHHH
Q 014232 313 D---VLSHIAVGGFW---SHCGWNSTLESICEGVPMICRPGFGDQRV--SARYVSHVWRIGLQLENDLEKGEVEKAVK 382 (428)
Q Consensus 313 ~---iL~~~~~~~~i---tHgG~~s~~eal~~GvP~v~~P~~~DQ~~--na~~v~~~~g~g~~l~~~~~~~~l~~ai~ 382 (428)
+ =+.-+++ |+ --||..|+.|+|..|||+|.. .|+||. |+.-+...+|+--.+- .-.++-++++|.
T Consensus 501 ~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~--~G~~FasR~~~si~~~agi~e~vA-~s~~dYV~~av~ 573 (620)
T COG3914 501 DHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTR--VGEQFASRNGASIATNAGIPELVA-DSRADYVEKAVA 573 (620)
T ss_pred HHHHhhchhhe--eeecccCCCccchHHHHHhcCceeee--ccHHHHHhhhHHHHHhcCCchhhc-CCHHHHHHHHHH
Confidence 4 3445555 65 479999999999999999998 477774 3444444344432222 244555777774
No 119
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.51 E-value=0.47 Score=47.95 Aligned_cols=76 Identities=17% Similarity=0.157 Sum_probs=52.2
Q ss_pred CceEEeecChH-hhhccCCcCceeecc---cc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHH
Q 014232 302 NGCVVKWAPQK-DVLSHIAVGGFWSHC---GW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGE 376 (428)
Q Consensus 302 ~~~v~~~~pq~-~iL~~~~~~~~itHg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~ 376 (428)
++.+.++.++. +++..+++ ||.-+ |. ++++||+++|+|+|+.-..+... +.. -+.|. +. -+.++
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~-g~nGl-l~--~D~Ea 670 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRS-FPNCL-TY--KTSED 670 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eee-cCCeE-ec--CCHHH
Confidence 34566777755 48999998 87633 33 58999999999999976654321 222 12333 22 36899
Q ss_pred HHHHHHHHhcCc
Q 014232 377 VEKAVKQLMVEK 388 (428)
Q Consensus 377 l~~ai~~vl~~~ 388 (428)
+.++|.+++.++
T Consensus 671 fAeAI~~LLsd~ 682 (794)
T PLN02501 671 FVAKVKEALANE 682 (794)
T ss_pred HHHHHHHHHhCc
Confidence 999999999873
No 120
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=96.42 E-value=0.0061 Score=45.07 Aligned_cols=62 Identities=19% Similarity=0.284 Sum_probs=47.4
Q ss_pred hhhhcccCCCCcEEEEEecccccC---CH--HHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhH
Q 014232 231 CISWLNNQAPNSVLYVSLGSIVSM---DK--KELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGF 295 (428)
Q Consensus 231 ~~~~l~~~~~~~vv~vsfGS~~~~---~~--~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~ 295 (428)
+-+|+...+.++-|+||+||.... .. ..+..+++++..++..+|..+....... ++.+|+|+
T Consensus 30 ~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~---lg~lP~nV 96 (97)
T PF06722_consen 30 VPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAE---LGELPDNV 96 (97)
T ss_dssp EEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGG---CCS-TTTE
T ss_pred CCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHh---hCCCCCCC
Confidence 567888888899999999998873 33 4688899999999999999988654322 34567664
No 121
>PHA01633 putative glycosyl transferase group 1
Probab=96.31 E-value=0.027 Score=52.21 Aligned_cols=102 Identities=14% Similarity=0.115 Sum_probs=63.2
Q ss_pred CCCceEE---eecChH---hhhccCCcCceeec---ccc-chhHHhhhcCCceecccc------ccch------hhhHHH
Q 014232 300 GENGCVV---KWAPQK---DVLSHIAVGGFWSH---CGW-NSTLESICEGVPMICRPG------FGDQ------RVSARY 357 (428)
Q Consensus 300 ~~~~~v~---~~~pq~---~iL~~~~~~~~itH---gG~-~s~~eal~~GvP~v~~P~------~~DQ------~~na~~ 357 (428)
.+++.+. +++++. +++..+++ ||.- =|+ .+++||+++|+|+|+.-. .+|+ ..+...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 3566776 455654 56888888 8864 354 478899999999998532 2333 333333
Q ss_pred Hhh-hheeEEEcCCccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q 014232 358 VSH-VWRIGLQLENDLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDV 404 (428)
Q Consensus 358 v~~-~~g~g~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~ 404 (428)
... ..|.|..++ ..++++++++|.+++...+.+....++++.++.+
T Consensus 278 ~~~~~~g~g~~~~-~~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~f 324 (335)
T PHA01633 278 YYDKEHGQKWKIH-KFQIEDMANAIILAFELQDREERSMKLKELAKKY 324 (335)
T ss_pred hcCcccCceeeec-CCCHHHHHHHHHHHHhccChhhhhHHHHHHHHhc
Confidence 321 136777766 4899999999999855422123334444444443
No 122
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.16 E-value=0.26 Score=48.63 Aligned_cols=112 Identities=20% Similarity=0.194 Sum_probs=65.1
Q ss_pred CCCceEEeecChH-hhhccCCcCceeec---ccc-chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCH
Q 014232 300 GENGCVVKWAPQK-DVLSHIAVGGFWSH---CGW-NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEK 374 (428)
Q Consensus 300 ~~~~~v~~~~pq~-~iL~~~~~~~~itH---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 374 (428)
.+++.+.+|..+. .+|..+++ ||.. -|+ +++.||+++|+|+|+.... .+...+.+ -..|..++. -+.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~d-G~nG~LVp~-~D~ 525 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIE-GVSGFILDD-AQT 525 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHccc-CCcEEEECC-CCh
Confidence 3677888886443 57899999 8853 454 6999999999999977543 34555544 257777763 334
Q ss_pred HHHHHHH---HHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 375 GEVEKAV---KQLMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 375 ~~l~~ai---~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
+.+.+++ .++....+ ...+.+++++ -+++.-+...-+++..+.++
T Consensus 526 ~aLa~ai~lA~aL~~ll~~~~~mg~~ARe-------~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 526 VNLDQACRYAEKLVNLWRSRTGICQQTQS-------FLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHhhCCHHHHHHHHHHHHH
Confidence 4454444 22222200 0123233322 22345566666666665554
No 123
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=96.05 E-value=0.12 Score=50.95 Aligned_cols=114 Identities=15% Similarity=0.159 Sum_probs=69.5
Q ss_pred hCCCceEEeecChH---hhhccCCcCceeecc---ccc-hhHHhhhcCCceeccccccchhhhHHHHhh-----hheeEE
Q 014232 299 VGENGCVVKWAPQK---DVLSHIAVGGFWSHC---GWN-STLESICEGVPMICRPGFGDQRVSARYVSH-----VWRIGL 366 (428)
Q Consensus 299 ~~~~~~v~~~~pq~---~iL~~~~~~~~itHg---G~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~-----~~g~g~ 366 (428)
.+.++.+....+.. .++..+++ |+.-. |.| +++||+.+|+|.|+....+ ....+.+ .-+.|.
T Consensus 344 ~~~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~ 417 (473)
T TIGR02095 344 YPGNVRVIIGYDEALAHLIYAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGF 417 (473)
T ss_pred CCCcEEEEEcCCHHHHHHHHHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceE
Confidence 34556666555654 47888888 77532 444 7899999999999865533 1112211 016787
Q ss_pred EcCCccCHHHHHHHHHHHhc----CchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhcC
Q 014232 367 QLENDLEKGEVEKAVKQLMV----EKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNLF 428 (428)
Q Consensus 367 ~l~~~~~~~~l~~ai~~vl~----~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 428 (428)
.++. -+++++.++|.+++. + ++.+ +++++. ++++.=+-...++++++..++|
T Consensus 418 l~~~-~d~~~la~~i~~~l~~~~~~---~~~~---~~~~~~---~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 418 LFEE-YDPGALLAALSRALRLYRQD---PSLW---EALQKN---AMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred EeCC-CCHHHHHHHHHHHHHHHhcC---HHHH---HHHHHH---HhccCCCcHHHHHHHHHHHHhC
Confidence 7764 688899999999886 4 2222 222222 2224556666777777666543
No 124
>PRK14098 glycogen synthase; Provisional
Probab=95.67 E-value=0.23 Score=49.03 Aligned_cols=114 Identities=9% Similarity=0.057 Sum_probs=68.8
Q ss_pred hhCCCceEEeecChH---hhhccCCcCceeecc---cc-chhHHhhhcCCceecccccc--chhhhHHHHhhhheeEEEc
Q 014232 298 AVGENGCVVKWAPQK---DVLSHIAVGGFWSHC---GW-NSTLESICEGVPMICRPGFG--DQRVSARYVSHVWRIGLQL 368 (428)
Q Consensus 298 ~~~~~~~v~~~~pq~---~iL~~~~~~~~itHg---G~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~g~g~~l 368 (428)
+.+.++.+...++.. .+++.+++ |+.-. |. .+.+||+.+|+|.|+....+ |...+ ...+ -+.|..+
T Consensus 359 ~~~~~V~~~g~~~~~~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~-~~~G~l~ 433 (489)
T PRK14098 359 EHPEQVSVQTEFTDAFFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSED-KGSGFIF 433 (489)
T ss_pred HCCCCEEEEEecCHHHHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCC-CCceeEe
Confidence 335677888888875 58889998 77543 22 37789999999888776533 21111 1112 2677777
Q ss_pred CCccCHHHHHHHHHHHh---cCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 369 ENDLEKGEVEKAVKQLM---VEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 369 ~~~~~~~~l~~ai~~vl---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
+. -+++++.++|.+++ ++ ++. .++++ +.++.+.-+-...+++.++..+
T Consensus 434 ~~-~d~~~la~ai~~~l~~~~~---~~~---~~~~~---~~~~~~~fsw~~~a~~y~~lY~ 484 (489)
T PRK14098 434 HD-YTPEALVAKLGEALALYHD---EER---WEELV---LEAMERDFSWKNSAEEYAQLYR 484 (489)
T ss_pred CC-CCHHHHHHHHHHHHHHHcC---HHH---HHHHH---HHHhcCCCChHHHHHHHHHHHH
Confidence 63 67899999998865 34 221 11222 1222345555666666665544
No 125
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=95.66 E-value=0.019 Score=46.77 Aligned_cols=94 Identities=10% Similarity=0.137 Sum_probs=44.8
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCC-CCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHccCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPNP-SNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQMP 80 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~~-~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 80 (428)
..|++.|.++||+|+++++....... ....++.++.++-.... . ........ ..+...+ ..+..
T Consensus 8 ~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~--------~~~~~~l--~~~~~-- 72 (160)
T PF13579_consen 8 RELARALAARGHEVTVVTPQPDPEDDEEEEDGVRVHRLPLPRRP--W-PLRLLRFL--------RRLRRLL--AARRE-- 72 (160)
T ss_dssp HHHHHHHHHTT-EEEEEEE---GGG-SEEETTEEEEEE--S-SS--S-GGGHCCHH--------HHHHHHC--HHCT---
T ss_pred HHHHHHHHHCCCEEEEEecCCCCcccccccCCceEEeccCCccc--h-hhhhHHHH--------HHHHHHH--hhhcc--
Confidence 57999999999999999876433321 22247888877621111 0 00000111 1122222 11222
Q ss_pred CCCceEEEEcCch-hhHHHHHH-HcCCceEEEec
Q 014232 81 ADEIVCIIYDELM-YFAESAAN-QLKLRSIILRT 112 (428)
Q Consensus 81 ~~~~D~vI~D~~~-~~~~~~A~-~lgiP~v~~~~ 112 (428)
+||+|.+.... .....++. ..++|.|...-
T Consensus 73 --~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 73 --RPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp ----SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred --CCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 89999977644 23344555 78999987664
No 126
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.11 E-value=0.27 Score=48.45 Aligned_cols=84 Identities=12% Similarity=0.055 Sum_probs=52.6
Q ss_pred CCCceEEeecChH---hhhccCCcCceeecc---cc-chhHHhhhcCCceecccccc--chhhhHHHHhhhheeEEEcCC
Q 014232 300 GENGCVVKWAPQK---DVLSHIAVGGFWSHC---GW-NSTLESICEGVPMICRPGFG--DQRVSARYVSHVWRIGLQLEN 370 (428)
Q Consensus 300 ~~~~~v~~~~pq~---~iL~~~~~~~~itHg---G~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~g~g~~l~~ 370 (428)
.+|+.+....++. .++..+++ ++.-. |. .+.+||+.+|+|.|+....+ |--.+.....+ -|.|..++.
T Consensus 350 ~~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~-~~~G~~~~~ 426 (476)
T cd03791 350 PGRVAVLIGYDEALAHLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTG-EGTGFVFEG 426 (476)
T ss_pred CCcEEEEEeCCHHHHHHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCC-CCCeEEeCC
Confidence 4566655444443 36788888 76431 22 37799999999999865533 21111111112 247888774
Q ss_pred ccCHHHHHHHHHHHhcC
Q 014232 371 DLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 371 ~~~~~~l~~ai~~vl~~ 387 (428)
-+.+++.+++.++++.
T Consensus 427 -~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 427 -YNADALLAALRRALAL 442 (476)
T ss_pred -CCHHHHHHHHHHHHHH
Confidence 5789999999998853
No 127
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=94.96 E-value=0.39 Score=39.70 Aligned_cols=96 Identities=10% Similarity=-0.034 Sum_probs=54.9
Q ss_pred hCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHccCCCCCceEEEE
Q 014232 10 SKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQMPADEIVCIIY 89 (428)
Q Consensus 10 ~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~D~vI~ 89 (428)
++||+|++++...+.... +|++.+.+...-........-...+-..+ .. -......+.+|.+++ - .||+||.
T Consensus 1 q~gh~v~fl~~~~~~~~~---~GV~~~~y~~~~~~~~~~~~~~~~~e~~~-~r-g~av~~a~~~L~~~G--f-~PDvI~~ 72 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP---PGVRVVRYRPPRGPTPGTHPYVRDFEAAV-LR-GQAVARAARQLRAQG--F-VPDVIIA 72 (171)
T ss_pred CCCCEEEEEecCCCCCCC---CCcEEEEeCCCCCCCCCCCcccccHHHHH-HH-HHHHHHHHHHHHHcC--C-CCCEEEE
Confidence 589999999855443333 48888888642111111100011111111 11 122334566666653 2 6899999
Q ss_pred cCchhhHHHHHHHc-CCceEEEecc
Q 014232 90 DELMYFAESAANQL-KLRSIILRTN 113 (428)
Q Consensus 90 D~~~~~~~~~A~~l-giP~v~~~~~ 113 (428)
++-.-.++.+-+.+ ++|.+.+.=.
T Consensus 73 H~GWGe~Lflkdv~P~a~li~Y~E~ 97 (171)
T PF12000_consen 73 HPGWGETLFLKDVFPDAPLIGYFEF 97 (171)
T ss_pred cCCcchhhhHHHhCCCCcEEEEEEE
Confidence 98655567788888 8999887644
No 128
>PRK00654 glgA glycogen synthase; Provisional
Probab=94.95 E-value=0.41 Score=47.07 Aligned_cols=131 Identities=13% Similarity=0.163 Sum_probs=72.3
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHh---CCCCeEEEEcCCCCCCCccccCCchhH---HHhhCCCceE-EeecChH--
Q 014232 242 SVLYVSLGSIVSMDKKELKEMAWGLYN---SKQPFLWVLRPSSTSASSGIELLPEGF---EEAVGENGCV-VKWAPQK-- 312 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~~~~~~~~al~~---~~~~~iw~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~v-~~~~pq~-- 312 (428)
..+++..|.+.. ..-+..+++|+.. .+.++++. |.+. . ...+.+ .++.+.++.+ .+|-.+.
T Consensus 282 ~~~i~~vGRl~~--~KG~~~li~a~~~l~~~~~~lviv-G~g~--~-----~~~~~l~~l~~~~~~~v~~~~g~~~~~~~ 351 (466)
T PRK00654 282 APLFAMVSRLTE--QKGLDLVLEALPELLEQGGQLVLL-GTGD--P-----ELEEAFRALAARYPGKVGVQIGYDEALAH 351 (466)
T ss_pred CcEEEEeecccc--ccChHHHHHHHHHHHhcCCEEEEE-ecCc--H-----HHHHHHHHHHHHCCCcEEEEEeCCHHHHH
Confidence 456667777654 2223334444433 35666654 3321 0 011122 1233445443 4553222
Q ss_pred hhhccCCcCceeec---cccc-hhHHhhhcCCceecccccc--chhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhc
Q 014232 313 DVLSHIAVGGFWSH---CGWN-STLESICEGVPMICRPGFG--DQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMV 386 (428)
Q Consensus 313 ~iL~~~~~~~~itH---gG~~-s~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~ 386 (428)
.++..+++ ||.- -|.| +.+||+.+|+|.|+....+ |.-.+...-.+ -+.|..++. -+++++.++|.++++
T Consensus 352 ~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~-~~~G~lv~~-~d~~~la~~i~~~l~ 427 (466)
T PRK00654 352 RIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDG-EATGFVFDD-FNAEDLLRALRRALE 427 (466)
T ss_pred HHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCC-CCceEEeCC-CCHHHHHHHHHHHHH
Confidence 47888998 7753 3554 8899999999999865432 21111100012 267877764 678999999999886
No 129
>PHA01630 putative group 1 glycosyl transferase
Probab=94.91 E-value=1.3 Score=41.33 Aligned_cols=113 Identities=8% Similarity=0.109 Sum_probs=63.1
Q ss_pred eecChHh---hhccCCcCceee---ccc-cchhHHhhhcCCceecccccc--chhhh---HHHHhh----------hhee
Q 014232 307 KWAPQKD---VLSHIAVGGFWS---HCG-WNSTLESICEGVPMICRPGFG--DQRVS---ARYVSH----------VWRI 364 (428)
Q Consensus 307 ~~~pq~~---iL~~~~~~~~it---HgG-~~s~~eal~~GvP~v~~P~~~--DQ~~n---a~~v~~----------~~g~ 364 (428)
.++|+.+ ++..+++ |+. ..| -.++.||+++|+|+|+.-..+ |.-.+ +..+.. ..++
T Consensus 196 ~~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~ 273 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHV 273 (331)
T ss_pred ccCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccc
Confidence 4477665 5888888 663 333 358999999999999976543 32111 111100 0123
Q ss_pred EEEcCCccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 365 GLQLENDLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 365 g~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
|..++ .+.+++.+++.+++.+.+.+.++++.+.-+.... +.-+-...++++.+.+++
T Consensus 274 G~~v~--~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~----~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 274 GYFLD--PDIEDAYQKLLEALANWTPEKKKENLEGRAILYR----ENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ccccC--CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH----HhCCHHHHHHHHHHHHhc
Confidence 44333 3678888888888876211223333322222222 445566777777776653
No 130
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=94.74 E-value=0.47 Score=37.68 Aligned_cols=90 Identities=14% Similarity=0.149 Sum_probs=54.0
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHccCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQMPA 81 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 81 (428)
..+++.|.++||+|++++............+++++.++-. .......+. + . .+..+.+..
T Consensus 14 ~~~~~~L~~~g~~V~ii~~~~~~~~~~~~~~i~~~~~~~~-------~k~~~~~~~-~--------~-~l~k~ik~~--- 73 (139)
T PF13477_consen 14 YNLAKELKKRGYDVHIITPRNDYEKYEIIEGIKVIRLPSP-------RKSPLNYIK-Y--------F-RLRKIIKKE--- 73 (139)
T ss_pred HHHHHHHHHCCCEEEEEEcCCCchhhhHhCCeEEEEecCC-------CCccHHHHH-H--------H-HHHHHhccC---
Confidence 5789999999999999998644433333358888888522 111111111 1 1 223333333
Q ss_pred CCceEEEEcCchhh---HHHHHHHcC-CceEEEec
Q 014232 82 DEIVCIIYDELMYF---AESAANQLK-LRSIILRT 112 (428)
Q Consensus 82 ~~~D~vI~D~~~~~---~~~~A~~lg-iP~v~~~~ 112 (428)
+||+|.+...... +..++...+ +|.+....
T Consensus 74 -~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 74 -KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred -CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 8999987775532 334556788 88875443
No 131
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=94.60 E-value=0.39 Score=35.12 Aligned_cols=82 Identities=18% Similarity=0.188 Sum_probs=51.2
Q ss_pred ccccchhHHhhhcCCceeccccccchhhhHHHHhhhhe-eEEEcCCccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q 014232 326 HCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWR-IGLQLENDLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDV 404 (428)
Q Consensus 326 HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g-~g~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~ 404 (428)
+|-..-+.|++.+|+|+|+-+. ......+ .. | -++..+ +.+++.++|..+++|++ ..++-+++-++.+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~-~~~~~~~~---~~~el~~~i~~ll~~~~--~~~~ia~~a~~~v 77 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-ED-GEHIITYN---DPEELAEKIEYLLENPE--ERRRIAKNARERV 77 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-CC-CCeEEEEC---CHHHHHHHHHHHHCCHH--HHHHHHHHHHHHH
Confidence 4455689999999999997654 3333333 22 4 344444 89999999999999832 3333344444444
Q ss_pred HHHHhcCCChHHHHHHHH
Q 014232 405 ELCIKESGSSSSSLNKFL 422 (428)
Q Consensus 405 ~~~~~~~g~~~~~~~~~~ 422 (428)
+ +.-+-..-++.|+
T Consensus 78 ~----~~~t~~~~~~~il 91 (92)
T PF13524_consen 78 L----KRHTWEHRAEQIL 91 (92)
T ss_pred H----HhCCHHHHHHHHH
Confidence 4 4555555555554
No 132
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=93.40 E-value=1.8 Score=41.82 Aligned_cols=163 Identities=10% Similarity=0.180 Sum_probs=87.4
Q ss_pred hhhcccCCCCcEEEEEecccccC------CHHH----HHHHHHHHHhCCCCeEEEEcCCCCC---CCccccCCchhHHHh
Q 014232 232 ISWLNNQAPNSVLYVSLGSIVSM------DKKE----LKEMAWGLYNSKQPFLWVLRPSSTS---ASSGIELLPEGFEEA 298 (428)
Q Consensus 232 ~~~l~~~~~~~vv~vsfGS~~~~------~~~~----~~~~~~al~~~~~~~iw~~~~~~~~---~~~~~~~~p~~~~~~ 298 (428)
..|+...+++++|-||....... ..+. +..+++.+.+.++++++.---.+.+ ..+ ...-..+.+.
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD--~~~~~~l~~~ 302 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDD--RMVALNLRQH 302 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCch--HHHHHHHHHh
Confidence 34554333455777776543311 2222 3334454545688877654321110 000 0001223334
Q ss_pred hCC--CceEE--eecChH--hhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEE-cC-C
Q 014232 299 VGE--NGCVV--KWAPQK--DVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQ-LE-N 370 (428)
Q Consensus 299 ~~~--~~~v~--~~~pq~--~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~-l~-~ 370 (428)
+.. +..++ ++=|.+ .+++++++ +|..= +=++.-|+..|||.+.++. |.-.... +.+ +|..-. .+ .
T Consensus 303 ~~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~~K~~~~-~~~-lg~~~~~~~~~ 375 (426)
T PRK10017 303 VSDPARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--EHKSAGI-MQQ-LGLPEMAIDIR 375 (426)
T ss_pred cccccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--hHHHHHH-HHH-cCCccEEechh
Confidence 332 23332 232333 68888888 88642 2256668899999999988 3333332 233 576644 34 3
Q ss_pred ccCHHHHHHHHHHHhcCch--hHHHHHHHHHHHHH
Q 014232 371 DLEKGEVEKAVKQLMVEKE--GQEMRQRAKNLKED 403 (428)
Q Consensus 371 ~~~~~~l~~ai~~vl~~~~--~~~~~~~a~~l~~~ 403 (428)
.++.++|.+.+.+++++.+ .+.+++++.++++.
T Consensus 376 ~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~ 410 (426)
T PRK10017 376 HLLDGSLQAMVADTLGQLPALNARLAEAVSRERQT 410 (426)
T ss_pred hCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 7899999999999998853 34445555555543
No 133
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=92.97 E-value=1 Score=41.98 Aligned_cols=138 Identities=12% Similarity=0.176 Sum_probs=87.6
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHH----HhC-CCCeEEEEcCCCCCCCccccCCchhHHHhhC--CCceEE---eecC
Q 014232 241 NSVLYVSLGSIVSMDKKELKEMAWGL----YNS-KQPFLWVLRPSSTSASSGIELLPEGFEEAVG--ENGCVV---KWAP 310 (428)
Q Consensus 241 ~~vv~vsfGS~~~~~~~~~~~~~~al----~~~-~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~v~---~~~p 310 (428)
+..+.|++=-..+.. +-+..+.+++ ++. +..+|.....+. . +-+-..++.. +|+.+. +|.+
T Consensus 204 ~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~~--~------v~e~~~~~L~~~~~v~li~pl~~~~ 274 (383)
T COG0381 204 KKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPRP--R------VRELVLKRLKNVERVKLIDPLGYLD 274 (383)
T ss_pred CcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCCh--h------hhHHHHHHhCCCCcEEEeCCcchHH
Confidence 458888875444433 3344455544 334 344444433321 0 1111112333 346654 6778
Q ss_pred hHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCchh
Q 014232 311 QKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKEG 390 (428)
Q Consensus 311 q~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~~ 390 (428)
...++.++.+ ++|-.|- -.-||-..|+|.+++=..-++|. ++ ++ |.-+.+. .+.+.+.+++.+++++
T Consensus 275 f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~v-~a-gt~~lvg--~~~~~i~~~~~~ll~~--- 341 (383)
T COG0381 275 FHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---GV-EA-GTNILVG--TDEENILDAATELLED--- 341 (383)
T ss_pred HHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---ce-ec-CceEEeC--ccHHHHHHHHHHHhhC---
Confidence 8889999988 9998874 46789999999999988888887 44 42 5555554 6779999999999998
Q ss_pred HHHHHHHHHH
Q 014232 391 QEMRQRAKNL 400 (428)
Q Consensus 391 ~~~~~~a~~l 400 (428)
++..+|.+..
T Consensus 342 ~~~~~~m~~~ 351 (383)
T COG0381 342 EEFYERMSNA 351 (383)
T ss_pred hHHHHHHhcc
Confidence 6666554443
No 134
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=92.00 E-value=1.7 Score=42.57 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=70.4
Q ss_pred eecChHh---hhccCCcCceee---ccccc-hhHHhhhcCCc----eeccccccchhhhHHHHhhhheeEEEcCCccCHH
Q 014232 307 KWAPQKD---VLSHIAVGGFWS---HCGWN-STLESICEGVP----MICRPGFGDQRVSARYVSHVWRIGLQLENDLEKG 375 (428)
Q Consensus 307 ~~~pq~~---iL~~~~~~~~it---HgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~ 375 (428)
..+++.+ ++..+++ |+. +=|+| ++.||+++|+| +|+--+.+- +..+ +-|+.++. -+.+
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l----~~gllVnP-~d~~ 410 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL----NGALLVNP-YDID 410 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh----CCcEEECC-CCHH
Confidence 4556665 5778888 876 44764 77899999999 665544332 2222 24555553 6789
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 376 EVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 376 ~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
+++++|.++++... ++.+++.+++++.+. .-+...-++.+++.|.
T Consensus 411 ~lA~aI~~aL~~~~-~er~~r~~~~~~~v~-----~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 411 GMADAIARALTMPL-EEREERHRAMMDKLR-----KNDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHcCCH-HHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhh
Confidence 99999999998532 356677777777765 3677777888887764
No 135
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=91.96 E-value=1.9 Score=35.27 Aligned_cols=23 Identities=30% Similarity=0.483 Sum_probs=18.1
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNS 24 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~ 24 (428)
..|+++|+++||+|+++++....
T Consensus 19 ~~l~~~l~~~G~~v~v~~~~~~~ 41 (177)
T PF13439_consen 19 LNLARALAKRGHEVTVVSPGVKD 41 (177)
T ss_dssp HHHHHHHHHTT-EEEEEESS-TT
T ss_pred HHHHHHHHHCCCEEEEEEcCCCc
Confidence 57999999999999999877433
No 136
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=91.73 E-value=3.1 Score=40.83 Aligned_cols=103 Identities=20% Similarity=0.224 Sum_probs=62.8
Q ss_pred EeecChHh---hhccCCcCceee---ccccc-hhHHhhhcCCc----eeccccccchhhhHHHHhhhheeEEEcCCccCH
Q 014232 306 VKWAPQKD---VLSHIAVGGFWS---HCGWN-STLESICEGVP----MICRPGFGDQRVSARYVSHVWRIGLQLENDLEK 374 (428)
Q Consensus 306 ~~~~pq~~---iL~~~~~~~~it---HgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 374 (428)
.+++++.+ ++..+++ ||. +-|+| ++.||+++|+| +|+.-..+ .+. . ..-|+.++ .-+.
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G----~~~-~---~~~g~lv~-p~d~ 414 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG----AAE-E---LSGALLVN-PYDI 414 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc----chh-h---cCCCEEEC-CCCH
Confidence 46778776 5788888 774 45664 67999999999 55442221 111 1 12345554 2578
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 014232 375 GEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFF 425 (428)
Q Consensus 375 ~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 425 (428)
++++++|.+++++.+ ++.+++.++.++.+. .-+...-+++++..|
T Consensus 415 ~~la~ai~~~l~~~~-~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 415 DEVADAIHRALTMPL-EERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred HHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 999999999998632 233344444444443 355666667776654
No 137
>PLN02939 transferase, transferring glycosyl groups
Probab=91.39 E-value=5.6 Score=42.10 Aligned_cols=83 Identities=12% Similarity=0.101 Sum_probs=54.7
Q ss_pred CCceEEeecChH---hhhccCCcCceeecc---cc-chhHHhhhcCCceecccccc--chhhh--HHHHhhhheeEEEcC
Q 014232 301 ENGCVVKWAPQK---DVLSHIAVGGFWSHC---GW-NSTLESICEGVPMICRPGFG--DQRVS--ARYVSHVWRIGLQLE 369 (428)
Q Consensus 301 ~~~~v~~~~pq~---~iL~~~~~~~~itHg---G~-~s~~eal~~GvP~v~~P~~~--DQ~~n--a~~v~~~~g~g~~l~ 369 (428)
+++.+..+.+.. .+++.+++ ||.-. |. .+++||+.+|+|.|+....+ |--.+ ...+..+-+.|..++
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~ 914 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFL 914 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEec
Confidence 467788888765 48899998 88642 22 47999999999999876544 22211 111111125676666
Q ss_pred CccCHHHHHHHHHHHhc
Q 014232 370 NDLEKGEVEKAVKQLMV 386 (428)
Q Consensus 370 ~~~~~~~l~~ai~~vl~ 386 (428)
. .+++.+..+|.+++.
T Consensus 915 ~-~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 915 T-PDEQGLNSALERAFN 930 (977)
T ss_pred C-CCHHHHHHHHHHHHH
Confidence 3 588889888888764
No 138
>PLN02316 synthase/transferase
Probab=91.20 E-value=3 Score=44.64 Aligned_cols=117 Identities=9% Similarity=0.079 Sum_probs=69.3
Q ss_pred CCceEEeecChH---hhhccCCcCceeecc---cc-chhHHhhhcCCceecccccc--chhhhH----HHHh--hhheeE
Q 014232 301 ENGCVVKWAPQK---DVLSHIAVGGFWSHC---GW-NSTLESICEGVPMICRPGFG--DQRVSA----RYVS--HVWRIG 365 (428)
Q Consensus 301 ~~~~v~~~~pq~---~iL~~~~~~~~itHg---G~-~s~~eal~~GvP~v~~P~~~--DQ~~na----~~v~--~~~g~g 365 (428)
+++.+....+.. .+++.+++ |+.-. |. .+.+||+++|+|.|+....+ |.-... .+.+ ..-+.|
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tG 977 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNG 977 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCce
Confidence 455555444543 58888888 88543 22 48999999999888765433 322211 0000 001467
Q ss_pred EEcCCccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 014232 366 LQLENDLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFF 425 (428)
Q Consensus 366 ~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 425 (428)
..++. .+++.|..+|.+++.+ |....+.+++..+.++...=|-...+++.++..
T Consensus 978 flf~~-~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY 1031 (1036)
T PLN02316 978 FSFDG-ADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQDWSWNRPALDYMELY 1031 (1036)
T ss_pred EEeCC-CCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 77764 7888999999999875 333334445555555445555555555554443
No 139
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=90.79 E-value=1.3 Score=38.11 Aligned_cols=49 Identities=18% Similarity=0.104 Sum_probs=35.6
Q ss_pred CCceEEeecChH----hhhccCCcCceeeccc----cchhHHhhhcCCceeccccccch
Q 014232 301 ENGCVVKWAPQK----DVLSHIAVGGFWSHCG----WNSTLESICEGVPMICRPGFGDQ 351 (428)
Q Consensus 301 ~~~~v~~~~pq~----~iL~~~~~~~~itHgG----~~s~~eal~~GvP~v~~P~~~DQ 351 (428)
.|+.+.++++.. .++..+++ +|+-.. -+++.||+.+|+|+|+.+..+.+
T Consensus 161 ~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~ 217 (229)
T cd01635 161 DRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGPP 217 (229)
T ss_pred ccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCcc
Confidence 566777776322 24444787 887776 68999999999999998765543
No 140
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=89.57 E-value=1.1 Score=38.13 Aligned_cols=25 Identities=24% Similarity=0.301 Sum_probs=21.1
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPN 26 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~ 26 (428)
.+|++.|.+.||+|+++.+..+++.
T Consensus 17 ~aL~~~L~~~g~~V~VvAP~~~~Sg 41 (196)
T PF01975_consen 17 RALAKALSALGHDVVVVAPDSEQSG 41 (196)
T ss_dssp HHHHHHHTTTSSEEEEEEESSSTTT
T ss_pred HHHHHHHHhcCCeEEEEeCCCCCcC
Confidence 4789999888999999999877654
No 141
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=87.56 E-value=2.1 Score=42.63 Aligned_cols=92 Identities=17% Similarity=0.235 Sum_probs=62.9
Q ss_pred CCceEEeecCh--H-hhhccCCcCceeecc---ccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCH
Q 014232 301 ENGCVVKWAPQ--K-DVLSHIAVGGFWSHC---GWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEK 374 (428)
Q Consensus 301 ~~~~v~~~~pq--~-~iL~~~~~~~~itHg---G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 374 (428)
..+.+.++... . .++.+..+ +|.=+ |.++.+||+.+|+|+| .......|.. ..-|.-+ -+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li---~d~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYII---DDI 475 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEe---CCH
Confidence 35566788773 3 47778887 88766 6789999999999999 3333444533 3456555 378
Q ss_pred HHHHHHHHHHhcCch-hHHHHHHHHHHHHHHH
Q 014232 375 GEVEKAVKQLMVEKE-GQEMRQRAKNLKEDVE 405 (428)
Q Consensus 375 ~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~ 405 (428)
.+|.+++..+|++.+ -..+...|-+.++...
T Consensus 476 ~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 476 SELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 899999999999843 3345555555555543
No 142
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.48 E-value=1.5 Score=39.23 Aligned_cols=91 Identities=19% Similarity=0.237 Sum_probs=56.5
Q ss_pred CCceE-EeecChHhhhccCCcCceeeccccchhH-HhhhcCCceeccccccchhhh--HHHHhhhheeEEEcCCccCHHH
Q 014232 301 ENGCV-VKWAPQKDVLSHIAVGGFWSHCGWNSTL-ESICEGVPMICRPGFGDQRVS--ARYVSHVWRIGLQLENDLEKGE 376 (428)
Q Consensus 301 ~~~~v-~~~~pq~~iL~~~~~~~~itHgG~~s~~-eal~~GvP~v~~P~~~DQ~~n--a~~v~~~~g~g~~l~~~~~~~~ 376 (428)
+|..+ ..|-...++|.++++ .|--. ||.. +++--|+|.|.+|-.+-|+.- |.|=.+-+|+.+.+-+ -.+..
T Consensus 294 dnc~l~lsqqsfadiLH~ada--algmA--GTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-~~aq~ 368 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--ALGMA--GTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-PEAQA 368 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HHHhc--cchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-Cchhh
Confidence 34443 366666677777766 44333 3333 457789999999999999765 4444344577776653 23333
Q ss_pred HHHHHHHHhcCchhHHHHHHHHH
Q 014232 377 VEKAVKQLMVEKEGQEMRQRAKN 399 (428)
Q Consensus 377 l~~ai~~vl~~~~~~~~~~~a~~ 399 (428)
-..++++++.| +.+.+++++
T Consensus 369 a~~~~q~ll~d---p~r~~air~ 388 (412)
T COG4370 369 AAQAVQELLGD---PQRLTAIRH 388 (412)
T ss_pred HHHHHHHHhcC---hHHHHHHHh
Confidence 33445559999 776666664
No 143
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=87.30 E-value=4.5 Score=37.29 Aligned_cols=59 Identities=12% Similarity=0.031 Sum_probs=41.1
Q ss_pred cChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhh-h---HHHHhhhheeEEEcCC
Q 014232 309 APQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRV-S---ARYVSHVWRIGLQLEN 370 (428)
Q Consensus 309 ~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~-n---a~~v~~~~g~g~~l~~ 370 (428)
=|+..+|+.++. .|||=--.+-+.||+..|+|+.++|+-. +.. . .+.+++ .|+-..+..
T Consensus 220 nPy~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~-~g~~r~~~~ 282 (311)
T PF06258_consen 220 NPYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSLEE-RGAVRPFTG 282 (311)
T ss_pred CcHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHHHH-CCCEEECCC
Confidence 367788888876 2455555789999999999999999876 322 1 234444 377666654
No 144
>PRK00654 glgA glycogen synthase; Provisional
Probab=84.20 E-value=4.6 Score=39.75 Aligned_cols=20 Identities=20% Similarity=0.190 Sum_probs=17.7
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
-.|+++|+++||+|+++++.
T Consensus 24 ~~L~~~L~~~G~~V~v~~p~ 43 (466)
T PRK00654 24 GALPKALAALGHDVRVLLPG 43 (466)
T ss_pred HHHHHHHHHCCCcEEEEecC
Confidence 36899999999999999865
No 145
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=84.02 E-value=16 Score=35.46 Aligned_cols=133 Identities=8% Similarity=0.079 Sum_probs=80.6
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHhCC-CCeEEEEcCCCCCCCccccCCchhHH--HhhCCCceEE-eecC-h-Hh
Q 014232 240 PNSVLYVSLGSIVSMDKKELKEMAWGLYNSK-QPFLWVLRPSSTSASSGIELLPEGFE--EAVGENGCVV-KWAP-Q-KD 313 (428)
Q Consensus 240 ~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~v~-~~~p-q-~~ 313 (428)
+..+++++ +...++.+....+.+| ..|-+..+.. ..+.+. ++. +|+..- ++.+ + .+
T Consensus 282 ~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te----------~s~kL~~L~~y-~nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 282 RKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTE----------MSSKLMSLDKY-DNVKLYPNITTQKIQE 343 (438)
T ss_pred cccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCc----------ccHHHHHHHhc-CCcEEECCcChHHHHH
Confidence 44577777 3566666777766654 4544322221 112221 233 555554 6677 3 36
Q ss_pred hhccCCcCceeeccc--cchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCchhH
Q 014232 314 VLSHIAVGGFWSHCG--WNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKEGQ 391 (428)
Q Consensus 314 iL~~~~~~~~itHgG--~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~~~ 391 (428)
++..|.+-+-|+||. ..++.||+.+|+|++..=... .+...+ .. |..+. .-+.+++.++|.++|.+ +
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~---~~~~~i-~~---g~l~~-~~~~~~m~~~i~~lL~d---~ 412 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETA---HNRDFI-AS---ENIFE-HNEVDQLISKLKDLLND---P 412 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEeccc---CCcccc-cC---Cceec-CCCHHHHHHHHHHHhcC---H
Confidence 999999988889977 479999999999999763221 111122 21 32233 35679999999999998 5
Q ss_pred -HHHHHHHHHH
Q 014232 392 -EMRQRAKNLK 401 (428)
Q Consensus 392 -~~~~~a~~l~ 401 (428)
.++++..+-+
T Consensus 413 ~~~~~~~~~q~ 423 (438)
T TIGR02919 413 NQFRELLEQQR 423 (438)
T ss_pred HHHHHHHHHHH
Confidence 4555444433
No 146
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=83.84 E-value=3.8 Score=40.78 Aligned_cols=75 Identities=11% Similarity=0.027 Sum_probs=47.9
Q ss_pred ChHhhhccCCcCceee---ccccc-hhHHhhhcCCceeccccccchhhhHHHHhhhh-eeEEEcCC------ccCHHHHH
Q 014232 310 PQKDVLSHIAVGGFWS---HCGWN-STLESICEGVPMICRPGFGDQRVSARYVSHVW-RIGLQLEN------DLEKGEVE 378 (428)
Q Consensus 310 pq~~iL~~~~~~~~it---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~-g~g~~l~~------~~~~~~l~ 378 (428)
+..+++..+++ ||. +=|+| +++||+++|+|+|+....+=- .++..+...- ..|+.+.. .-+.++|.
T Consensus 467 ~y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~-~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La 543 (590)
T cd03793 467 DYEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFG-CFMEEHIEDPESYGIYIVDRRFKSPDESVQQLT 543 (590)
T ss_pred chHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchh-hhhHHHhccCCCceEEEecCCccchHHHHHHHH
Confidence 46677888888 665 45654 899999999999997653310 1122222211 25666642 23567888
Q ss_pred HHHHHHhcC
Q 014232 379 KAVKQLMVE 387 (428)
Q Consensus 379 ~ai~~vl~~ 387 (428)
+++.++++.
T Consensus 544 ~~m~~~~~~ 552 (590)
T cd03793 544 QYMYEFCQL 552 (590)
T ss_pred HHHHHHhCC
Confidence 888888865
No 147
>PRK14099 glycogen synthase; Provisional
Probab=83.72 E-value=28 Score=34.48 Aligned_cols=84 Identities=13% Similarity=0.146 Sum_probs=46.8
Q ss_pred CCc-eEEeecChH-hhh-ccCCcCceee---ccccc-hhHHhhhcCCceecccccc--chhhhHHHHhh--hheeEEEcC
Q 014232 301 ENG-CVVKWAPQK-DVL-SHIAVGGFWS---HCGWN-STLESICEGVPMICRPGFG--DQRVSARYVSH--VWRIGLQLE 369 (428)
Q Consensus 301 ~~~-~v~~~~pq~-~iL-~~~~~~~~it---HgG~~-s~~eal~~GvP~v~~P~~~--DQ~~na~~v~~--~~g~g~~l~ 369 (428)
.++ .+.+|-... .++ +.+++ |+. +=|.| +.+||+.+|.|.|+....+ |--.......+ .-+.|..++
T Consensus 350 ~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~ 427 (485)
T PRK14099 350 GQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS 427 (485)
T ss_pred CCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeC
Confidence 343 345663322 233 45677 775 34443 7789999997666654322 32111110000 014677776
Q ss_pred CccCHHHHHHHHHH---HhcC
Q 014232 370 NDLEKGEVEKAVKQ---LMVE 387 (428)
Q Consensus 370 ~~~~~~~l~~ai~~---vl~~ 387 (428)
. -+.++|.++|.+ +++|
T Consensus 428 ~-~d~~~La~ai~~a~~l~~d 447 (485)
T PRK14099 428 P-VTADALAAALRKTAALFAD 447 (485)
T ss_pred C-CCHHHHHHHHHHHHHHhcC
Confidence 4 688999999987 5666
No 148
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=81.73 E-value=9.2 Score=37.64 Aligned_cols=19 Identities=21% Similarity=0.300 Sum_probs=17.3
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
.|+++|+++||+|+++++.
T Consensus 24 ~L~~aL~~~G~~V~Vi~p~ 42 (476)
T cd03791 24 ALPKALAKLGHDVRVIMPK 42 (476)
T ss_pred HHHHHHHHCCCeEEEEecC
Confidence 6899999999999999865
No 149
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=80.65 E-value=44 Score=30.25 Aligned_cols=79 Identities=25% Similarity=0.347 Sum_probs=52.3
Q ss_pred CCceEEeecC---hHhhhccCCcCceeec---cccch-hHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccC
Q 014232 301 ENGCVVKWAP---QKDVLSHIAVGGFWSH---CGWNS-TLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLE 373 (428)
Q Consensus 301 ~~~~v~~~~p---q~~iL~~~~~~~~itH---gG~~s-~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~ 373 (428)
.++.+.++++ ...++..+++ ++.. .|.|. +.||+++|+|++.. +.......+ ...+.|. +.....
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~----~~~~~~e~~-~~~~~g~-~~~~~~ 328 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIAS----DVGGIPEVV-EDGETGL-LVPPGD 328 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEEC----CCCChHHHh-cCCCceE-ecCCCC
Confidence 5667789988 2346777777 6666 35544 59999999999754 333333334 3222466 433236
Q ss_pred HHHHHHHHHHHhcC
Q 014232 374 KGEVEKAVKQLMVE 387 (428)
Q Consensus 374 ~~~l~~ai~~vl~~ 387 (428)
.+.+..++..++++
T Consensus 329 ~~~~~~~i~~~~~~ 342 (381)
T COG0438 329 VEELADALEQLLED 342 (381)
T ss_pred HHHHHHHHHHHhcC
Confidence 89999999999988
No 150
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=79.99 E-value=7.4 Score=33.20 Aligned_cols=32 Identities=9% Similarity=-0.084 Sum_probs=22.2
Q ss_pred CceEEEEcCchhhHH---HHHHHcCCceEEEeccc
Q 014232 83 EIVCIIYDELMYFAE---SAANQLKLRSIILRTNS 114 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~---~~A~~lgiP~v~~~~~~ 114 (428)
++|+|++........ ..+...++|.+......
T Consensus 51 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~ 85 (229)
T cd01635 51 KPDVVHAHGYYPAPLALLLAARLLGIPLVLTVHGV 85 (229)
T ss_pred CCCEEEEcCCCcHHHHHHHHHhhCCCCEEEEEcCc
Confidence 799999777654333 45677899987765443
No 151
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=79.25 E-value=10 Score=37.31 Aligned_cols=19 Identities=21% Similarity=0.270 Sum_probs=17.3
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
.|+++|+++||+|.++++.
T Consensus 25 ~L~~aL~~~G~~v~v~~p~ 43 (473)
T TIGR02095 25 ALPKALAALGHDVRVLLPA 43 (473)
T ss_pred HHHHHHHHcCCeEEEEecC
Confidence 6899999999999999865
No 152
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=78.45 E-value=11 Score=39.89 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=63.2
Q ss_pred hhhccCCcCceeec---cccc-hhHHhhhcCCceeccccccchhhhHHHHhhhhe-eEEEcCCccCHHHHHHHHHHHhcC
Q 014232 313 DVLSHIAVGGFWSH---CGWN-STLESICEGVPMICRPGFGDQRVSARYVSHVWR-IGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 313 ~iL~~~~~~~~itH---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g-~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
.++..+++ |+.- -|+| +.+|++++|.|-=.+++..+--..+.. +| -|+.++. .+.++++++|.++|+.
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~----l~~~allVnP-~D~~~lA~AI~~aL~m 443 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQS----LGAGALLVNP-WNITEVSSAIKEALNM 443 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhh----hcCCeEEECC-CCHHHHHHHHHHHHhC
Confidence 47778888 7754 4886 677999999992222222222222222 23 4677664 6889999999999983
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 388 KEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 388 ~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
.+ ++-+++.+++.+.++ .-+...-++.|++.+.
T Consensus 444 ~~-~er~~r~~~~~~~v~-----~~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 444 SD-EERETRHRHNFQYVK-----THSAQKWADDFMSELN 476 (797)
T ss_pred CH-HHHHHHHHHHHHhhh-----hCCHHHHHHHHHHHHH
Confidence 21 344555666666654 3456666677776664
No 153
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=77.14 E-value=1 Score=33.27 Aligned_cols=84 Identities=14% Similarity=0.218 Sum_probs=44.5
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHccCC
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQMP 80 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 80 (428)
++.+|+.|++.|+++. .|+.......+ .|++...+.+....+.....+. +. .++.+..
T Consensus 2 ~~~~a~~l~~lG~~i~--AT~gTa~~L~~-~Gi~~~~v~~~~~~~~~~~g~~----------------~i-~~~i~~~-- 59 (95)
T PF02142_consen 2 IVPLAKRLAELGFEIY--ATEGTAKFLKE-HGIEVTEVVNKIGEGESPDGRV----------------QI-MDLIKNG-- 59 (95)
T ss_dssp HHHHHHHHHHTTSEEE--EEHHHHHHHHH-TT--EEECCEEHSTG-GGTHCH----------------HH-HHHHHTT--
T ss_pred HHHHHHHHHHCCCEEE--EChHHHHHHHH-cCCCceeeeeecccCccCCchh----------------HH-HHHHHcC--
Confidence 4789999999998854 44434444443 3788666543211110000011 23 3344443
Q ss_pred CCCceEEEEcCchh------hH---HHHHHHcCCceE
Q 014232 81 ADEIVCIIYDELMY------FA---ESAANQLKLRSI 108 (428)
Q Consensus 81 ~~~~D~vI~D~~~~------~~---~~~A~~lgiP~v 108 (428)
+.|+||..+... -+ ..+|..++||++
T Consensus 60 --~IdlVIn~~~~~~~~~~~dg~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 60 --KIDLVINTPYPFSDQEHTDGYKIRRAAVEYNIPLF 94 (95)
T ss_dssp --SEEEEEEE--THHHHHTHHHHHHHHHHHHTTSHEE
T ss_pred --CeEEEEEeCCCCcccccCCcHHHHHHHHHcCCCCc
Confidence 899999765431 12 347788899976
No 154
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=76.78 E-value=6.2 Score=28.62 Aligned_cols=79 Identities=14% Similarity=0.185 Sum_probs=44.0
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHccCC
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQMP 80 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 80 (428)
++.+++.|++.|+++. +|+.......+. |++...+.....++. + + +.++.+..
T Consensus 2 ~~~~~~~l~~lG~~i~--AT~gTa~~L~~~-Gi~~~~~~~ki~~~~------~---------------~-i~~~i~~g-- 54 (90)
T smart00851 2 LVELAKRLAELGFELV--ATGGTAKFLREA-GLPVKTLHPKVHGGI------L---------------A-ILDLIKNG-- 54 (90)
T ss_pred HHHHHHHHHHCCCEEE--EccHHHHHHHHC-CCcceeccCCCCCCC------H---------------H-HHHHhcCC--
Confidence 4789999999999974 444334333333 665432111111100 0 1 33344444
Q ss_pred CCCceEEEEcCc---------hhhHHHHHHHcCCceE
Q 014232 81 ADEIVCIIYDEL---------MYFAESAANQLKLRSI 108 (428)
Q Consensus 81 ~~~~D~vI~D~~---------~~~~~~~A~~lgiP~v 108 (428)
++|+||.-+. ...-..+|...+||++
T Consensus 55 --~id~VIn~~~~~~~~~~~d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 55 --EIDLVINTLYPLGAQPHEDGKALRRAAENIDIPGA 89 (90)
T ss_pred --CeEEEEECCCcCcceeccCcHHHHHHHHHcCCCee
Confidence 8999997442 1233457888899976
No 155
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=75.95 E-value=35 Score=35.81 Aligned_cols=109 Identities=15% Similarity=0.117 Sum_probs=65.8
Q ss_pred EEeecChHh---hhccCCcCceeec---cccc-hhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHH
Q 014232 305 VVKWAPQKD---VLSHIAVGGFWSH---CGWN-STLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEV 377 (428)
Q Consensus 305 v~~~~pq~~---iL~~~~~~~~itH---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l 377 (428)
+.+++++.+ ++..+++ |+.- -|+| ++.|++++|+|-.++|+..+--.-+..+ .-|+.++. -+.+++
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv~P-~d~~~l 418 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLVNP-NDIEGI 418 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEECC-CCHHHH
Confidence 446788775 6677887 7754 3654 7889999977633333333222222222 22566553 678999
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 378 EKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 378 ~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
+++|.++++..+ ++.+++.+++++.++ .-+...-++.|++.++
T Consensus 419 a~ai~~~l~~~~-~e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~ 461 (726)
T PRK14501 419 AAAIKRALEMPE-EEQRERMQAMQERLR-----RYDVHKWASDFLDELR 461 (726)
T ss_pred HHHHHHHHcCCH-HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHH
Confidence 999999988522 234444455555543 3556666677776654
No 156
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=75.58 E-value=9.1 Score=34.13 Aligned_cols=22 Identities=23% Similarity=0.267 Sum_probs=17.6
Q ss_pred HHHHHHHhCCCeEEEEeCCCCC
Q 014232 3 QLGTILYSKGFSITVVHTDFNS 24 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~~~~ 24 (428)
.||+.|.++||+|+..+.....
T Consensus 14 ~la~~L~~~g~~v~~s~~t~~~ 35 (256)
T TIGR00715 14 AIAKGLIAQGIEILVTVTTSEG 35 (256)
T ss_pred HHHHHHHhCCCeEEEEEccCCc
Confidence 6899999999999977766443
No 157
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=75.52 E-value=18 Score=31.92 Aligned_cols=25 Identities=28% Similarity=0.331 Sum_probs=20.3
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPNP 27 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~~ 27 (428)
-+|++.|. .+++|+++.+..+++-.
T Consensus 17 ~aL~~al~-~~~dV~VVAP~~~qSg~ 41 (252)
T COG0496 17 RALARALR-EGADVTVVAPDREQSGA 41 (252)
T ss_pred HHHHHHHh-hCCCEEEEccCCCCccc
Confidence 46888888 99999999998776543
No 158
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=75.42 E-value=35 Score=30.16 Aligned_cols=24 Identities=25% Similarity=0.184 Sum_probs=19.5
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPN 26 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~ 26 (428)
.+|+++|.+.| +|+++.+...++-
T Consensus 17 ~aL~~~l~~~g-~V~VvAP~~~~Sg 40 (244)
T TIGR00087 17 RALYQALKELG-EVTVVAPARQRSG 40 (244)
T ss_pred HHHHHHHHhCC-CEEEEeCCCCccc
Confidence 57899999998 8998888866644
No 159
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=74.28 E-value=20 Score=32.24 Aligned_cols=41 Identities=15% Similarity=0.068 Sum_probs=33.4
Q ss_pred ceEEeecChHhhhccCCcCceeeccccchhHHhhhcCCceeccc
Q 014232 303 GCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRP 346 (428)
Q Consensus 303 ~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P 346 (428)
+.+.+-++-.++|.+++. +||-.+- .-+||+.+|+|++++.
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinSt-vGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINST-VGLEALLHGKPVIVFG 225 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECCH-HHHHHHHcCCceEEec
Confidence 334577888899999998 8888554 7789999999999863
No 160
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=73.10 E-value=76 Score=29.07 Aligned_cols=96 Identities=18% Similarity=0.101 Sum_probs=56.4
Q ss_pred HHHHHHHhCCCeEEEEeCCCCC-CCCCCCCCceEEEcCCCCCCCCCCcCCHH-HHHHHHHHhhchhHHHHHHHHHHccCC
Q 014232 3 QLGTILYSKGFSITVVHTDFNS-PNPSNHPKFSFQSIPEGLADDDIYSGNII-AIIMHLNANCGAPFHKCLVQMMKQQMP 80 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~~~~-~~~~~~~gi~f~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~ 80 (428)
.|-.+|.++||+|.+.+-+... ...-+.-|+.+..+...- ...+. ++.....+. -.|.++..+.
T Consensus 18 ~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~~~~Igk~g------~~tl~~Kl~~~~eR~------~~L~ki~~~~-- 83 (346)
T COG1817 18 NLIWELEKKGHEVLITCRDFGVVTELLDLYGFPYKSIGKHG------GVTLKEKLLESAERV------YKLSKIIAEF-- 83 (346)
T ss_pred HHHHHHHhCCeEEEEEEeecCcHHHHHHHhCCCeEeecccC------CccHHHHHHHHHHHH------HHHHHHHhhc--
Confidence 4667899999999854433221 111122377776665210 01122 222211111 1334444443
Q ss_pred CCCceEEEEcCchhhHHHHHHHcCCceEEEecccH
Q 014232 81 ADEIVCIIYDELMYFAESAANQLKLRSIILRTNSA 115 (428)
Q Consensus 81 ~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~ 115 (428)
+||+.|. -..+....+|--+|+|.+++.-..-
T Consensus 84 --kpdv~i~-~~s~~l~rvafgLg~psIi~~D~eh 115 (346)
T COG1817 84 --KPDVAIG-KHSPELPRVAFGLGIPSIIFVDNEH 115 (346)
T ss_pred --CCceEee-cCCcchhhHHhhcCCceEEecCChh
Confidence 8999998 5578889999999999999987753
No 161
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=72.74 E-value=12 Score=33.76 Aligned_cols=94 Identities=13% Similarity=0.133 Sum_probs=52.1
Q ss_pred cEEEEEeccccc---CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhh-CCCce-EEee--cCh-Hh
Q 014232 242 SVLYVSLGSIVS---MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAV-GENGC-VVKW--APQ-KD 313 (428)
Q Consensus 242 ~vv~vsfGS~~~---~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~-v~~~--~pq-~~ 313 (428)
+.|.+..|+... .+.+.+.++++-+.+.+.++++..+.+. ...-..+.+.. ..++. +.+- +.+ ..
T Consensus 122 ~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e-------~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~ 194 (279)
T cd03789 122 PVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAE-------RELAEEIAAALGGPRVVNLAGKTSLRELAA 194 (279)
T ss_pred CEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhh-------HHHHHHHHHhcCCCccccCcCCCCHHHHHH
Confidence 355555555432 5667777777777666666665432210 00111121111 11111 1221 222 35
Q ss_pred hhccCCcCceeeccccchhHHhhhcCCceecc
Q 014232 314 VLSHIAVGGFWSHCGWNSTLESICEGVPMICR 345 (428)
Q Consensus 314 iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~ 345 (428)
++.++++ +|+.-. |.++=|...|+|++++
T Consensus 195 li~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 195 LLARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 8889999 999854 6677778999999986
No 162
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=71.47 E-value=51 Score=29.30 Aligned_cols=24 Identities=13% Similarity=0.155 Sum_probs=18.5
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPN 26 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~ 26 (428)
.+|++.|.+ +|+|+++.+...++-
T Consensus 17 ~aL~~~l~~-~~~V~VvAP~~~~Sg 40 (253)
T PRK13933 17 NTLAELLSK-YHEVIIVAPENQRSA 40 (253)
T ss_pred HHHHHHHHh-CCcEEEEccCCCCcc
Confidence 578899965 689998888866643
No 163
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=70.23 E-value=47 Score=29.61 Aligned_cols=24 Identities=21% Similarity=0.171 Sum_probs=18.8
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPN 26 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~ 26 (428)
.+|++.|.+.| +|+++.+...++-
T Consensus 22 ~aL~~~l~~~g-~V~VvAP~~~~Sg 45 (257)
T PRK13932 22 HVLAASMKKIG-RVTVVAPAEPHSG 45 (257)
T ss_pred HHHHHHHHhCC-CEEEEcCCCCCCC
Confidence 47899999888 7998888866643
No 164
>PRK09620 hypothetical protein; Provisional
Probab=70.10 E-value=21 Score=31.29 Aligned_cols=19 Identities=26% Similarity=0.294 Sum_probs=17.0
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
+||++|.++|++|+++...
T Consensus 34 ~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 34 IIAEELISKGAHVIYLHGY 52 (229)
T ss_pred HHHHHHHHCCCeEEEEeCC
Confidence 6899999999999988755
No 165
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=69.39 E-value=9.9 Score=33.97 Aligned_cols=78 Identities=14% Similarity=0.181 Sum_probs=48.1
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCC-CCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHccC
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNH-PKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQM 79 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~-~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 79 (428)
++.||++|.++|..++|++.+.....+... .++.+ ..+... . ...+.
T Consensus 21 ~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~~~~f~~-------------------------~~~~~~--n----~ik~~- 68 (318)
T COG3980 21 TLTLARELEKRGFACLFLTKQDIEAIIHKVYEGFKV-------------------------LEGRGN--N----LIKEE- 68 (318)
T ss_pred HHHHHHHHHhcCceEEEecccchhhhhhhhhhhccc-------------------------eeeecc--c----ccccc-
Confidence 368999999999999999887433211100 01110 000000 0 23332
Q ss_pred CCCCceEEEEcCchhhH---HHHHHHcCCceEEEecc
Q 014232 80 PADEIVCIIYDELMYFA---ESAANQLKLRSIILRTN 113 (428)
Q Consensus 80 ~~~~~D~vI~D~~~~~~---~~~A~~lgiP~v~~~~~ 113 (428)
++|++|.|.+..-+ -.+..+.+.+.+++-.-
T Consensus 69 ---k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~ 102 (318)
T COG3980 69 ---KFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDE 102 (318)
T ss_pred ---cCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCC
Confidence 89999999987544 35777899999998644
No 166
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=67.40 E-value=65 Score=28.82 Aligned_cols=25 Identities=16% Similarity=0.054 Sum_probs=17.7
Q ss_pred HHHHHHHHhC---CCeEEEEeCCCCCCC
Q 014232 2 LQLGTILYSK---GFSITVVHTDFNSPN 26 (428)
Q Consensus 2 l~La~~L~~r---Gh~Vt~~~~~~~~~~ 26 (428)
.+|++.|.+. |++|+++.+...++-
T Consensus 17 ~aL~~~l~~~~~~~~~V~VVAP~~eqSg 44 (261)
T PRK13931 17 EVLEQIATELAGPDGEVWTVAPAFEQSG 44 (261)
T ss_pred HHHHHHHHHhccCCCeEEEEeCCCCCCC
Confidence 4677777663 479998888866643
No 167
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=67.27 E-value=21 Score=32.96 Aligned_cols=130 Identities=13% Similarity=0.068 Sum_probs=74.2
Q ss_pred CcEEEEEecc-ccc--CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEe--ecChH-hh
Q 014232 241 NSVLYVSLGS-IVS--MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVK--WAPQK-DV 314 (428)
Q Consensus 241 ~~vv~vsfGS-~~~--~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~--~~pq~-~i 314 (428)
++.|.+.-|+ ... .+.+.+.++++.+.+.+.++++..++.. +. ..-..+.+..+ +..+.+ -++|. .+
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~-----~~~~~i~~~~~-~~~l~g~~sL~el~al 251 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EK-----QRAERIAEALP-GAVVLPKMSLAEVAAL 251 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HH-----HHHHHHHhhCC-CCeecCCCCHHHHHHH
Confidence 4455555554 333 6788888999888766777766544321 00 01122222222 222332 34444 58
Q ss_pred hccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeE---EEcC--CccCHHHHHHHHHHHh
Q 014232 315 LSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIG---LQLE--NDLEKGEVEKAVKQLM 385 (428)
Q Consensus 315 L~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g---~~l~--~~~~~~~l~~ai~~vl 385 (428)
+.++++ ||+. --|-++=|...|+|.|++ ++ +.+..+.. -+|-. +.-. ..++.+++.++++++|
T Consensus 252 i~~a~l--~I~~-DSgp~HlAaa~g~P~i~l--fg--~t~p~~~~-P~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 252 LAGADA--VVGV-DTGLTHLAAALDKPTVTL--YG--ATDPGRTG-GYGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HHcCCE--EEeC-CChHHHHHHHcCCCEEEE--EC--CCCHhhcc-cCCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 889998 9997 567788888999999986 33 11222210 11211 1111 2699999999998764
No 168
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=66.78 E-value=70 Score=28.46 Aligned_cols=24 Identities=21% Similarity=0.211 Sum_probs=18.1
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPN 26 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~ 26 (428)
.+|++.|.+ +|+|+++.+...++-
T Consensus 17 ~aL~~~l~~-~~~V~VvAP~~~qSg 40 (253)
T PRK13935 17 IILAEYLSE-KHEVFVVAPDKERSA 40 (253)
T ss_pred HHHHHHHHh-CCcEEEEccCCCCcc
Confidence 478888865 689998888866643
No 169
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=65.35 E-value=12 Score=31.58 Aligned_cols=21 Identities=19% Similarity=0.252 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCeEEEEeCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDF 22 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~ 22 (428)
.+||+++..|||+||++..+.
T Consensus 33 ~~lA~~~~~~Ga~V~li~g~~ 53 (185)
T PF04127_consen 33 AALAEEAARRGAEVTLIHGPS 53 (185)
T ss_dssp HHHHHHHHHTT-EEEEEE-TT
T ss_pred HHHHHHHHHCCCEEEEEecCc
Confidence 368999999999999999884
No 170
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=61.94 E-value=18 Score=29.54 Aligned_cols=29 Identities=24% Similarity=0.260 Sum_probs=25.0
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCCC
Q 014232 243 VLYVSLGSIVSMDKKELKEMAWGLYNSKQ 271 (428)
Q Consensus 243 vv~vsfGS~~~~~~~~~~~~~~al~~~~~ 271 (428)
.+|+|+||........++..+++|.+.+.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~ 31 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALAD 31 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCC
Confidence 59999999998777778889999988764
No 171
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=61.69 E-value=1.4e+02 Score=27.90 Aligned_cols=143 Identities=13% Similarity=0.168 Sum_probs=81.2
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHhC---------CC-CeEEEEcCCCCCCCccccCCchhHHHhh----CCCceE
Q 014232 240 PNSVLYVSLGSIVSMDKKELKEMAWGLYNS---------KQ-PFLWVLRPSSTSASSGIELLPEGFEEAV----GENGCV 305 (428)
Q Consensus 240 ~~~vv~vsfGS~~~~~~~~~~~~~~al~~~---------~~-~~iw~~~~~~~~~~~~~~~~p~~~~~~~----~~~~~v 305 (428)
.++.++||--| ..+.+.+..+++|+... +. +++..+.+.+ ++-+...+.+ =.++.+
T Consensus 253 ~~pallvsSTs--wTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKG--------PlkE~Y~~~I~~~~~~~v~~ 322 (444)
T KOG2941|consen 253 ERPALLVSSTS--WTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKG--------PLKEKYSQEIHEKNLQHVQV 322 (444)
T ss_pred CCCeEEEecCC--CCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCC--------chhHHHHHHHHHhcccceee
Confidence 45678887433 23566677777877621 11 3455554432 1223332222 245566
Q ss_pred E-eecC---hHhhhccCCcCceeeccccc-----hhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHH
Q 014232 306 V-KWAP---QKDVLSHIAVGGFWSHCGWN-----STLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGE 376 (428)
Q Consensus 306 ~-~~~p---q~~iL~~~~~~~~itHgG~~-----s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~ 376 (428)
. +|+. +..+|+.+++|..+|-.-.| -|..=.-+|+|.+.+-+ ---..++++---|.... ++++
T Consensus 323 ~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f-----kcl~ELVkh~eNGlvF~---Ds~e 394 (444)
T KOG2941|consen 323 CTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF-----KCLDELVKHGENGLVFE---DSEE 394 (444)
T ss_pred eecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecc-----hhHHHHHhcCCCceEec---cHHH
Confidence 5 8875 44599999999888876544 34444555666665522 22233334323355544 6889
Q ss_pred HHHHHHHHhcC----ch-hHHHHHHHHHH
Q 014232 377 VEKAVKQLMVE----KE-GQEMRQRAKNL 400 (428)
Q Consensus 377 l~~ai~~vl~~----~~-~~~~~~~a~~l 400 (428)
|++.+..++.| .+ ..++++|+++-
T Consensus 395 La~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 395 LAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 99999888873 22 45666666654
No 172
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=61.18 E-value=16 Score=33.22 Aligned_cols=76 Identities=8% Similarity=0.144 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHhhhccCCcCceeeccccchhH
Q 014232 254 MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTL 333 (428)
Q Consensus 254 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~ 333 (428)
.+.+..+.+-+|+.....+.||...++.. . . .+.++++...+-.|++. ||-+.-..+++
T Consensus 46 s~~~Ra~dL~~a~~d~~i~aI~~~rGG~g----------a-~--------rlL~~ld~~~~~~~pK~--~iGySDiTaL~ 104 (282)
T cd07025 46 TDEERAADLNAAFADPEIKAIWCARGGYG----------A-N--------RLLPYLDYDLIRANPKI--FVGYSDITALH 104 (282)
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCcCC----------H-H--------HhhhhCCHHHHhhCCeE--EEEecHHHHHH
Confidence 45666888999999999999999887531 1 1 35666777766677777 88888888888
Q ss_pred Hhhhc--CCceeccccccc
Q 014232 334 ESICE--GVPMICRPGFGD 350 (428)
Q Consensus 334 eal~~--GvP~v~~P~~~D 350 (428)
-+++. |++.+--|+..+
T Consensus 105 ~~l~~~~g~~t~hGp~~~~ 123 (282)
T cd07025 105 LALYAKTGLVTFHGPMLAS 123 (282)
T ss_pred HHHHHhcCceEEECccccc
Confidence 77764 777777776543
No 173
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=60.41 E-value=50 Score=30.08 Aligned_cols=24 Identities=33% Similarity=0.494 Sum_probs=19.7
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCCC
Q 014232 3 QLGTILYSKGFSITVVHTDFNSPN 26 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~~~~~~ 26 (428)
+|.++|.++||.|.++..++..++
T Consensus 70 ~L~~~l~~~G~rVaVlAVDPSSp~ 93 (323)
T COG1703 70 ALGRELRERGHRVAVLAVDPSSPF 93 (323)
T ss_pred HHHHHHHHCCcEEEEEEECCCCCC
Confidence 588999999999999987755543
No 174
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=60.37 E-value=35 Score=30.31 Aligned_cols=31 Identities=19% Similarity=0.120 Sum_probs=22.9
Q ss_pred CceEEE--EcCch----hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCII--YDELM----YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI--~D~~~----~~~~~~A~~lgiP~v~~~~~ 113 (428)
++++|| +++|. --+..+++++|||++-|--.
T Consensus 65 ~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR~ 101 (248)
T PRK08057 65 GIDLVIDATHPYAAQISANAAAACRALGIPYLRLERP 101 (248)
T ss_pred CCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 789988 56654 12456888999999999754
No 175
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=60.05 E-value=1.1e+02 Score=27.12 Aligned_cols=24 Identities=25% Similarity=0.202 Sum_probs=19.1
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPN 26 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~ 26 (428)
.+|++.|.+. |+|+++.+...++-
T Consensus 17 ~aL~~~l~~~-~~V~VvAP~~~qSg 40 (250)
T PRK00346 17 RALAEALREL-ADVTVVAPDRERSG 40 (250)
T ss_pred HHHHHHHHhC-CCEEEEeCCCCCcC
Confidence 4789999998 79998888866644
No 176
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=58.69 E-value=1e+02 Score=25.24 Aligned_cols=28 Identities=21% Similarity=0.372 Sum_probs=22.0
Q ss_pred cCceeeccccc------hhHHhhhcCCceecccc
Q 014232 320 VGGFWSHCGWN------STLESICEGVPMICRPG 347 (428)
Q Consensus 320 ~~~~itHgG~~------s~~eal~~GvP~v~~P~ 347 (428)
.+.+++|.|-| ++.+|...++|+|++.-
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 44488887744 77899999999999853
No 177
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=58.29 E-value=21 Score=29.98 Aligned_cols=37 Identities=27% Similarity=0.283 Sum_probs=27.5
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCC-CCCCCCCceEEEcC
Q 014232 3 QLGTILYSKGFSITVVHTDFNSP-NPSNHPKFSFQSIP 39 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~~~~~-~~~~~~gi~f~~l~ 39 (428)
.|+..|+++||+||+.+...+.. ......|++...+|
T Consensus 25 ~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~ 62 (185)
T PF09314_consen 25 ELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIP 62 (185)
T ss_pred HHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeC
Confidence 57888999999999988765553 33344588888886
No 178
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=58.17 E-value=75 Score=25.97 Aligned_cols=99 Identities=9% Similarity=0.047 Sum_probs=52.7
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCC--------CCC-CCCcCCHHHHHHHHHHhhchhHHHHHH
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGL--------ADD-DIYSGNIIAIIMHLNANCGAPFHKCLV 72 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~ 72 (428)
-++|.+|.++|++|.=+..............+....++++. .++ .....++..+-. -...++
T Consensus 17 ~~~a~~L~~~G~rv~G~vQ~~~~~~~~~~~~m~l~dl~~G~~~~IsQ~LG~gs~gCrLD~~~La~---------A~~~l~ 87 (159)
T PF10649_consen 17 AAFAARLRARGVRVAGLVQRNTADGDGGRCDMDLRDLPSGRRIRISQDLGPGSRGCRLDPGALAE---------ASAALR 87 (159)
T ss_pred HHHHHHHHhCCCeEEEEeccccCCCCCCccceEEEECCCCCEEEEeeccCCCCcccccCHHHHHH---------HHHHHH
Confidence 46899999999999855544222222222356666666432 111 112223322111 112333
Q ss_pred HHHHccCCCCCceEEEEcCch--h-hH------HHHHHHcCCceEEEeccc
Q 014232 73 QMMKQQMPADEIVCIIYDELM--Y-FA------ESAANQLKLRSIILRTNS 114 (428)
Q Consensus 73 ~l~~~~~~~~~~D~vI~D~~~--~-~~------~~~A~~lgiP~v~~~~~~ 114 (428)
..++. ++|++|..-|. . .+ ..-|-..|||+++..+..
T Consensus 88 ~al~~-----~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~~ 133 (159)
T PF10649_consen 88 RALAE-----GADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPPR 133 (159)
T ss_pred HHHhc-----CCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECHH
Confidence 33333 69999999874 1 11 123445799998876653
No 179
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=56.06 E-value=22 Score=27.84 Aligned_cols=37 Identities=16% Similarity=0.332 Sum_probs=27.7
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHh--CCCCeEEEEc
Q 014232 242 SVLYVSLGSIVSMDKKELKEMAWGLYN--SKQPFLWVLR 278 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~~~~~~~~al~~--~~~~~iw~~~ 278 (428)
.+++|+|||......+.+..+.+.+++ .+..|-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 589999999987555667888888865 2457777754
No 180
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=54.86 E-value=84 Score=29.02 Aligned_cols=20 Identities=15% Similarity=0.428 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
..|++.|.++||+|++++..
T Consensus 19 ~~l~~~L~~~g~~v~v~~~~ 38 (360)
T cd04951 19 VDLADQFVAKGHQVAIISLT 38 (360)
T ss_pred HHHHHhcccCCceEEEEEEe
Confidence 57899999999999998754
No 181
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=53.70 E-value=1.8e+02 Score=26.74 Aligned_cols=80 Identities=21% Similarity=0.218 Sum_probs=59.5
Q ss_pred CCceEE-eecC---hHhhhccCCcCceeec--cccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC-ccC
Q 014232 301 ENGCVV-KWAP---QKDVLSHIAVGGFWSH--CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN-DLE 373 (428)
Q Consensus 301 ~~~~v~-~~~p---q~~iL~~~~~~~~itH--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~-~~~ 373 (428)
+|..+. +.+| +..+|+.++++-|+++ =|.|++.-.++.|||.++- .+-++|.... + .|+-+-.+. .++
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl~-e-~gv~Vlf~~d~L~ 280 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDLT-E-QGLPVLFTGDDLD 280 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHHH-h-CCCeEEecCCccc
Confidence 455543 6776 5569999999888886 4899999999999999975 5566666655 4 388876654 788
Q ss_pred HHHHHHHHHHHh
Q 014232 374 KGEVEKAVKQLM 385 (428)
Q Consensus 374 ~~~l~~ai~~vl 385 (428)
...+.++=+++.
T Consensus 281 ~~~v~e~~rql~ 292 (322)
T PRK02797 281 EDIVREAQRQLA 292 (322)
T ss_pred HHHHHHHHHHHH
Confidence 888877755543
No 182
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=52.96 E-value=20 Score=33.80 Aligned_cols=20 Identities=10% Similarity=0.021 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
..+++.|.+.||+|+++++.
T Consensus 19 ~~l~~~l~~~g~~v~~~~~~ 38 (372)
T cd03792 19 HSLVPLMRDLGVDTRWEVIK 38 (372)
T ss_pred HHHHHHHHHcCCCceEEecC
Confidence 57899999999999998864
No 183
>PLN02470 acetolactate synthase
Probab=52.64 E-value=23 Score=36.01 Aligned_cols=92 Identities=11% Similarity=0.088 Sum_probs=52.7
Q ss_pred EecccccC--CHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEe--------ecChHhhhc
Q 014232 247 SLGSIVSM--DKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVK--------WAPQKDVLS 316 (428)
Q Consensus 247 sfGS~~~~--~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~--------~~pq~~iL~ 316 (428)
+|||.... .....+.+++.|++.|.+.++-+.+.... .+-+.+.+ .+++.++. ++-.-.-..
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~------~l~dal~~--~~~i~~i~~rhE~~A~~~Adgyar~ 73 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASM------EIHQALTR--SNCIRNVLCRHEQGEVFAAEGYAKA 73 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccH------HHHHHHhc--cCCceEEEeccHHHHHHHHHHHHHH
Confidence 47776552 22335678888999998888876554210 01111210 11222221 111111223
Q ss_pred cCCcCceeeccccc------hhHHhhhcCCceeccc
Q 014232 317 HIAVGGFWSHCGWN------STLESICEGVPMICRP 346 (428)
Q Consensus 317 ~~~~~~~itHgG~~------s~~eal~~GvP~v~~P 346 (428)
+..++++++|.|-| ++++|...++|||++.
T Consensus 74 tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 74 SGKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred hCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 33456699999954 8899999999999984
No 184
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=52.44 E-value=20 Score=32.05 Aligned_cols=39 Identities=10% Similarity=0.203 Sum_probs=24.1
Q ss_pred cEEEEEecccccCCHH-HHHHHHHHHHh--CCCCeEEEEcCC
Q 014232 242 SVLYVSLGSIVSMDKK-ELKEMAWGLYN--SKQPFLWVLRPS 280 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~-~~~~~~~al~~--~~~~~iw~~~~~ 280 (428)
.+++|||||......+ .+..+.+.+++ .+..|.|.+..+
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 4789999998874443 67777777766 367888887654
No 185
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=52.32 E-value=26 Score=26.64 Aligned_cols=81 Identities=15% Similarity=0.140 Sum_probs=45.8
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHc-cC
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQ-QM 79 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~ 79 (428)
++.+|+.|.+.||++. .|+.......+ .|++...+... +++ -.+ -+.++.++ .
T Consensus 14 ~~~~a~~l~~~G~~i~--AT~gTa~~L~~-~Gi~~~~v~~~-~~~-----------------g~~----~i~~~i~~~g- 67 (112)
T cd00532 14 LVDLAPKLSSDGFPLF--ATGGTSRVLAD-AGIPVRAVSKR-HED-----------------GEP----TVDAAIAEKG- 67 (112)
T ss_pred HHHHHHHHHHCCCEEE--ECcHHHHHHHH-cCCceEEEEec-CCC-----------------CCc----HHHHHHhCCC-
Confidence 4689999999999973 45433433333 37776555321 111 011 12223333 4
Q ss_pred CCCCceEEEE--cCch--------hhHHHHHHHcCCceEEE
Q 014232 80 PADEIVCIIY--DELM--------YFAESAANQLKLRSIIL 110 (428)
Q Consensus 80 ~~~~~D~vI~--D~~~--------~~~~~~A~~lgiP~v~~ 110 (428)
++|+||. |... +--...|-..+||++.-
T Consensus 68 ---~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T~ 105 (112)
T cd00532 68 ---KFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTTP 105 (112)
T ss_pred ---CEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEEC
Confidence 7999996 3221 22234688889998764
No 186
>PLN02316 synthase/transferase
Probab=51.99 E-value=1.1e+02 Score=33.24 Aligned_cols=21 Identities=5% Similarity=0.241 Sum_probs=18.3
Q ss_pred HHHHHHHHhCCCeEEEEeCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDF 22 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~ 22 (428)
-+|+++|+++||+|.++++..
T Consensus 611 ~sLp~ALa~~Gh~V~VitP~Y 631 (1036)
T PLN02316 611 TSLSRAVQDLNHNVDIILPKY 631 (1036)
T ss_pred HHHHHHHHHcCCEEEEEecCC
Confidence 379999999999999998763
No 187
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=51.31 E-value=28 Score=32.06 Aligned_cols=75 Identities=7% Similarity=0.022 Sum_probs=52.1
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHhhhccCCcCceeeccccchhH
Q 014232 254 MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTL 333 (428)
Q Consensus 254 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~ 333 (428)
.+.+..+.+.+|+.....+.||.+.++.. . . .+.++++...|-.||++ ||-..-..+++
T Consensus 50 ~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g----------~-~--------rlL~~lD~~~i~~~PK~--fiGySDiTaL~ 108 (308)
T cd07062 50 SPEERAEELMAAFADPSIKAIIPTIGGDD----------S-N--------ELLPYLDYELIKKNPKI--FIGYSDITALH 108 (308)
T ss_pred CHHHHHHHHHHHhcCCCCCEEEECCcccC----------H-h--------hhhhhcCHHHHhhCCCE--EEeccHHHHHH
Confidence 45666788999999999999999877531 1 1 35566666666667766 77777777777
Q ss_pred Hhhh--cCCceecccccc
Q 014232 334 ESIC--EGVPMICRPGFG 349 (428)
Q Consensus 334 eal~--~GvP~v~~P~~~ 349 (428)
-+++ .|++.+--|+..
T Consensus 109 ~al~~~~g~~t~hGp~~~ 126 (308)
T cd07062 109 LAIYKKTGLVTYYGPNLL 126 (308)
T ss_pred HHHHHhcCCeEEECcccc
Confidence 7764 366666666544
No 188
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=51.23 E-value=61 Score=26.48 Aligned_cols=98 Identities=11% Similarity=0.059 Sum_probs=51.4
Q ss_pred hhhhhcccCCCCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEee-
Q 014232 230 SCISWLNNQAPNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKW- 308 (428)
Q Consensus 230 ~~~~~l~~~~~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~- 308 (428)
++-++|.+. +...|+ |. .........++..+.+-+++=++..... +.+- ..+...+.++
T Consensus 22 ~lg~~La~~---g~~lv~-Gg----~~GlM~a~a~ga~~~gg~viGVlp~~l~---------~~~~---~~~~~i~~~~~ 81 (159)
T TIGR00725 22 RLGKELAKK---GHILIN-GG----RTGVMEAVSKGAREAGGLVVGILPDEDF---------AGNP---YLTIKVKTGMN 81 (159)
T ss_pred HHHHHHHHC---CCEEEc-CC----chhHHHHHHHHHHHCCCeEEEECChhhc---------cCCC---CceEEEECCCc
Confidence 366777653 245665 43 2244555666666666555544322100 0000 0011122344
Q ss_pred cChHhhhccCCcCceeeccccchhHH---hhhcCCceecccc
Q 014232 309 APQKDVLSHIAVGGFWSHCGWNSTLE---SICEGVPMICRPG 347 (428)
Q Consensus 309 ~pq~~iL~~~~~~~~itHgG~~s~~e---al~~GvP~v~~P~ 347 (428)
.+-..++...+-..++--||.||..| ++.+++|+++++.
T Consensus 82 ~~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 82 FARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred chHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 44555555433344566788887655 5889999998875
No 189
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=50.43 E-value=30 Score=32.75 Aligned_cols=109 Identities=12% Similarity=0.126 Sum_probs=62.0
Q ss_pred CCceEE-eecChHhhhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC----C--ccC
Q 014232 301 ENGCVV-KWAPQKDVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE----N--DLE 373 (428)
Q Consensus 301 ~~~~v~-~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~----~--~~~ 373 (428)
+++..+ +..+-.++|..+++ .||-- ...+.|.+..+.|++....-.|.+.. + .|.-.... + --+
T Consensus 252 ~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~-----~-rg~~~~~~~~~pg~~~~~ 322 (369)
T PF04464_consen 252 SNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEK-----E-RGFYFDYEEDLPGPIVYN 322 (369)
T ss_dssp TTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTT-----T-SSBSS-TTTSSSS-EESS
T ss_pred CcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhh-----c-cCCCCchHhhCCCceeCC
Confidence 444544 55567899999999 99987 44788999999999976544444422 1 24433331 1 357
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 014232 374 KGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKF 421 (428)
Q Consensus 374 ~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 421 (428)
.++|.++|..++.+. ..++++-+++.+.+-. ...|.++++-++.+
T Consensus 323 ~~eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~-~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 323 FEELIEAIENIIENP--DEYKEKREKFRDKFFK-YNDGNSSERIVNYI 367 (369)
T ss_dssp HHHHHHHHTTHHHHH--HHTHHHHHHHHHHHST-T--S-HHHHHHHHH
T ss_pred HHHHHHHHHhhhhCC--HHHHHHHHHHHHHhCC-CCCchHHHHHHHHH
Confidence 899999999988762 3455556666666632 12344444444443
No 190
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=50.14 E-value=43 Score=31.43 Aligned_cols=21 Identities=0% Similarity=-0.126 Sum_probs=17.7
Q ss_pred HHHHHHHHhC--CCeEEEEeCCC
Q 014232 2 LQLGTILYSK--GFSITVVHTDF 22 (428)
Q Consensus 2 l~La~~L~~r--Gh~Vt~~~~~~ 22 (428)
+.+++.|.++ ||+|++++...
T Consensus 21 ~~l~~~L~~~~~g~~v~v~~~~~ 43 (359)
T PRK09922 21 SNVINTFEESKINCEMFFFCRND 43 (359)
T ss_pred HHHHHHhhhcCcceeEEEEecCC
Confidence 5789999999 89999888653
No 191
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=49.80 E-value=39 Score=27.75 Aligned_cols=21 Identities=19% Similarity=0.458 Sum_probs=17.5
Q ss_pred HHHHHHHHhCCCeEEEEeCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDF 22 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~ 22 (428)
+.||..|+++|++|.++=.+.
T Consensus 18 ~~LA~~la~~g~~vllvD~D~ 38 (169)
T cd02037 18 VNLALALAKLGYKVGLLDADI 38 (169)
T ss_pred HHHHHHHHHcCCcEEEEeCCC
Confidence 478999999999999886653
No 192
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=49.71 E-value=39 Score=29.71 Aligned_cols=102 Identities=9% Similarity=0.104 Sum_probs=53.7
Q ss_pred CCcEEEEEeccccc---CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCce-EEe--ecCh-H
Q 014232 240 PNSVLYVSLGSIVS---MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGC-VVK--WAPQ-K 312 (428)
Q Consensus 240 ~~~vv~vsfGS~~~---~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-v~~--~~pq-~ 312 (428)
+++.|.+..|+... .+.+.+.++++.+.+.+.++++..+.... . ...-+.+.+....++. +.+ -+.+ .
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~l~e~~ 178 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQ-E----KEIADQIAAGLQNPVINLAGKTSLRELA 178 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHH-H----HHHHHHHHTTHTTTTEEETTTS-HHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHH-H----HHHHHHHHHhcccceEeecCCCCHHHHH
Confidence 45577777777554 68888999999998887666544332100 0 0000111111122222 222 2333 3
Q ss_pred hhhccCCcCceeeccccchhHHhhhcCCceeccccccch
Q 014232 313 DVLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQ 351 (428)
Q Consensus 313 ~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ 351 (428)
.++.++++ +|+. --|.++=|...|+|+|++ +++.
T Consensus 179 ali~~a~~--~I~~-Dtg~~HlA~a~~~p~v~l--fg~t 212 (247)
T PF01075_consen 179 ALISRADL--VIGN-DTGPMHLAAALGTPTVAL--FGPT 212 (247)
T ss_dssp HHHHTSSE--EEEE-SSHHHHHHHHTT--EEEE--ESSS
T ss_pred HHHhcCCE--EEec-CChHHHHHHHHhCCEEEE--ecCC
Confidence 58889998 9987 567788899999999998 4443
No 193
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=49.69 E-value=72 Score=29.79 Aligned_cols=97 Identities=10% Similarity=0.102 Sum_probs=58.9
Q ss_pred CcEEEEEeccccc---CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCC-Cce-EEe--ecChH-
Q 014232 241 NSVLYVSLGSIVS---MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGE-NGC-VVK--WAPQK- 312 (428)
Q Consensus 241 ~~vv~vsfGS~~~---~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~-v~~--~~pq~- 312 (428)
++.|.+..|+... .+.+.+.++++.+...+.++++.-+++..+. .+-..+.+..+. ++. +++ .+.+.
T Consensus 181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~-----~~~~~i~~~~~~~~~~~l~g~~sL~el~ 255 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDEL-----AMVNEIAQGCQTPRVTSLAGKLTLPQLA 255 (344)
T ss_pred CCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHH-----HHHHHHHhhCCCCcccccCCCCCHHHHH
Confidence 4567777776543 5778888888888766777665432211000 011122222111 111 222 23444
Q ss_pred hhhccCCcCceeeccccchhHHhhhcCCceecc
Q 014232 313 DVLSHIAVGGFWSHCGWNSTLESICEGVPMICR 345 (428)
Q Consensus 313 ~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~ 345 (428)
.++.++++ ||+. --|-++=|.+.|+|.|++
T Consensus 256 ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 256 ALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 58899999 9998 778899999999999986
No 194
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.41 E-value=99 Score=27.09 Aligned_cols=41 Identities=15% Similarity=0.053 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHHccCCCCCceEEEEcCchhh---HHHHHHHcCCceEEEec
Q 014232 65 APFHKCLVQMMKQQMPADEIVCIIYDELMYF---AESAANQLKLRSIILRT 112 (428)
Q Consensus 65 ~~l~~~l~~l~~~~~~~~~~D~vI~D~~~~~---~~~~A~~lgiP~v~~~~ 112 (428)
..++.++++|. +.++.+.|..+.. +..+|++.|||++.=..
T Consensus 138 ~aM~~~m~~Lk-------~r~l~flDs~T~a~S~a~~iAk~~gVp~~~rdv 181 (250)
T COG2861 138 DAMEKLMEALK-------ERGLYFLDSGTIANSLAGKIAKEIGVPVIKRDV 181 (250)
T ss_pred HHHHHHHHHHH-------HCCeEEEcccccccchhhhhHhhcCCceeeeee
Confidence 34445666663 5689999987643 56789999999987443
No 195
>TIGR00345 arsA arsenite-activated ATPase (arsA). The N-terminal 50 amino acids hits Pfam families NB-ARC and fer4_NifH. residues 4-11 of the seed alignment contain a potential ATP binding site. The function of the gene product is to catalyze the extrusion of the oxyanions arsenite, antimonite and arsenate for detoxification. Some members of this family contain a duplication so the model finds hits twice.
Probab=49.18 E-value=72 Score=28.97 Aligned_cols=22 Identities=23% Similarity=0.193 Sum_probs=19.0
Q ss_pred HHHHHHHhCCCeEEEEeCCCCC
Q 014232 3 QLGTILYSKGFSITVVHTDFNS 24 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~~~~ 24 (428)
++|..++++|++|-++.+...+
T Consensus 4 a~a~~~a~~g~~vllv~~Dp~~ 25 (284)
T TIGR00345 4 ATAIRLAEQGKKVLLVSTDPAH 25 (284)
T ss_pred HHHHHHHHCCCeEEEEECCCCC
Confidence 6899999999999999987554
No 196
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=48.83 E-value=30 Score=33.92 Aligned_cols=22 Identities=9% Similarity=0.267 Sum_probs=19.1
Q ss_pred HHHHHHHHhCCCeEEEEeCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFN 23 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~ 23 (428)
.+||+++..||++||+++.+..
T Consensus 286 ~alA~aa~~~GA~VtlI~Gp~~ 307 (475)
T PRK13982 286 FAIAAAAAAAGAEVTLISGPVD 307 (475)
T ss_pred HHHHHHHHHCCCcEEEEeCCcC
Confidence 3799999999999999997743
No 197
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=48.65 E-value=36 Score=27.27 Aligned_cols=38 Identities=18% Similarity=0.193 Sum_probs=29.9
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEc
Q 014232 240 PNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLR 278 (428)
Q Consensus 240 ~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~ 278 (428)
...+|++++||.-....+.++++++.+. .+.+++++..
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 4569999999998878888899988885 3577777643
No 198
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=48.59 E-value=1.6e+02 Score=30.78 Aligned_cols=86 Identities=10% Similarity=0.140 Sum_probs=48.9
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHH-hhchhHHHHHHHHHHccCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNA-NCGAPFHKCLVQMMKQQMP 80 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~l~~~~~~ 80 (428)
+.|++.|.++|.+|.++=|-.. + ++ ........+.. .....++.+++.+.+-.
T Consensus 21 lgL~~~L~~~G~~Vg~fKPi~~--------~----p~------------~~~~~~~~~~~~~~~~~~~~I~~~~~~l~-- 74 (684)
T PRK05632 21 LGLMRALERKGVKVGFFKPIAQ--------P----PL------------TMSEVEALLASGQLDELLEEIVARYHALA-- 74 (684)
T ss_pred HHHHHHHHhCCCeEEEeCCccc--------C----CC------------CHHHHHHHHhccCChHHHHHHHHHHHHhc--
Confidence 5789999999999998753311 1 00 01100011111 11223333444443211
Q ss_pred CCCceEEEEcCchh---------hHHHHHHHcCCceEEEeccc
Q 014232 81 ADEIVCIIYDELMY---------FAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 81 ~~~~D~vI~D~~~~---------~~~~~A~~lgiP~v~~~~~~ 114 (428)
. ++|+||+|...+ ...++|+.++.|++.+....
T Consensus 75 ~-~~D~VLIEGa~~~~~~~~~~~~na~iA~~L~~pVILV~~~~ 116 (684)
T PRK05632 75 K-DCDVVLVEGLDPTRKHPFEFSLNAEIAKNLGAEVVLVSSGG 116 (684)
T ss_pred c-CCCEEEEeCcCCCCcCcccCchHHHHHHHhCCCEEEEECCC
Confidence 2 789999887542 24678999999999987664
No 199
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=48.13 E-value=2.9e+02 Score=27.42 Aligned_cols=106 Identities=12% Similarity=0.165 Sum_probs=68.3
Q ss_pred eEEeecChHh---hhccCCcCceee---ccccchhH-HhhhcCC----ceeccccccchhhhHHHHhhhheeEEEcCCcc
Q 014232 304 CVVKWAPQKD---VLSHIAVGGFWS---HCGWNSTL-ESICEGV----PMICRPGFGDQRVSARYVSHVWRIGLQLENDL 372 (428)
Q Consensus 304 ~v~~~~pq~~---iL~~~~~~~~it---HgG~~s~~-eal~~Gv----P~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 372 (428)
++.+.+|+.+ ++.-+++ ++. .-|+|-|. |.++++. |+|.-- +.-|. .+ +.-++.++. .
T Consensus 365 ~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSe-----faGaa--~~-l~~AllVNP-~ 433 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSE-----FAGAA--VE-LKGALLTNP-Y 433 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEec-----cccch--hh-cCCCEEECC-C
Confidence 4557788776 4566777 554 34888554 9999877 555432 22222 12 344566664 6
Q ss_pred CHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhh
Q 014232 373 EKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFN 426 (428)
Q Consensus 373 ~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 426 (428)
+.++++++|.+.|+... ++-++|.+++.+.++ .-....=++.|++.|.
T Consensus 434 d~~~~A~ai~~AL~m~~-~Er~~R~~~l~~~v~-----~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 434 DPVRMDETIYVALAMPK-AEQQARMREMFDAVN-----YYDVQRWADEFLAAVS 481 (487)
T ss_pred CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhh
Confidence 88999999999998643 344666667777665 3456666777777664
No 200
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=48.08 E-value=1.2e+02 Score=28.34 Aligned_cols=103 Identities=14% Similarity=0.230 Sum_probs=68.8
Q ss_pred CceEEeecChHhhhc-cCCcCceeecc---ccc-hhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHH
Q 014232 302 NGCVVKWAPQKDVLS-HIAVGGFWSHC---GWN-STLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGE 376 (428)
Q Consensus 302 ~~~v~~~~pq~~iL~-~~~~~~~itHg---G~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~ 376 (428)
...+.+-.+--+.|+ |.++ +|+|= |.| -=.|+|+.|-|+| -|+..+. .+|...+. ++..+
T Consensus 254 kasfegR~~~p~fla~~tD~--VvSHqWeN~lNYlY~daLyggYPLV---------HNS~~l~---d~GYYY~~-fD~~~ 318 (364)
T PF10933_consen 254 KASFEGRFDFPDFLAQHTDA--VVSHQWENPLNYLYYDALYGGYPLV---------HNSPLLK---DVGYYYPD-FDAFE 318 (364)
T ss_pred eeEEeeecChHHHHHhCCCE--EEeccccchhhHHHHHHHhcCCCcc---------cCcchhc---ccCcCCCC-ccHHH
Confidence 344667777777665 8888 99994 334 4479999999999 5777773 47877774 55555
Q ss_pred HHHHHHHHhc--CchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 014232 377 VEKAVKQLMV--EKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFF 425 (428)
Q Consensus 377 l~~ai~~vl~--~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 425 (428)
=.+++.+.+. |++.+.|+++|+++=..+. =....+++...+.|
T Consensus 319 G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~------p~n~~nv~~y~~~L 363 (364)
T PF10933_consen 319 GARQLLRAIREHDADLDAYRARARRLLDRLS------PENPANVRAYEARL 363 (364)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHHhhC------CCCHHHHHHHHHhh
Confidence 5555555543 4457899999999887764 23445555544443
No 201
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=47.62 E-value=1.5e+02 Score=23.98 Aligned_cols=136 Identities=14% Similarity=0.164 Sum_probs=71.7
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHhhhccCCcCc
Q 014232 243 VLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGG 322 (428)
Q Consensus 243 vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~ 322 (428)
.|-|=+||.. +....+++...|++.+..+-..+-. ....|+.+. .++...+- ..+++
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~s--------aHR~p~~l~----------~~~~~~~~-~~~~v-- 58 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVAS--------AHRTPERLL----------EFVKEYEA-RGADV-- 58 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE----------TTTSHHHHH----------HHHHHTTT-TTESE--
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEe--------ccCCHHHHH----------HHHHHhcc-CCCEE--
Confidence 3566678876 6677788888888888665444332 123455442 22211111 23445
Q ss_pred eeeccccc----hhHHhhhcCCceeccccccchhhh----HHHHhhhheeEEEcCC---ccCHHHHHHHHHHHhcCchhH
Q 014232 323 FWSHCGWN----STLESICEGVPMICRPGFGDQRVS----ARYVSHVWRIGLQLEN---DLEKGEVEKAVKQLMVEKEGQ 391 (428)
Q Consensus 323 ~itHgG~~----s~~eal~~GvP~v~~P~~~DQ~~n----a~~v~~~~g~g~~l~~---~~~~~~l~~ai~~vl~~~~~~ 391 (428)
||.=.|.. ++.-++. -.|.|.+|....+... ...++.--|+++..-. -.++..++..|-. +.| +
T Consensus 59 iIa~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa-~~d---~ 133 (150)
T PF00731_consen 59 IIAVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILA-LKD---P 133 (150)
T ss_dssp EEEEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHH-TT----H
T ss_pred EEEECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHh-cCC---H
Confidence 99888864 4444444 7999999998775432 2333222255544322 2333444433322 346 7
Q ss_pred HHHHHHHHHHHHHHH
Q 014232 392 EMRQRAKNLKEDVEL 406 (428)
Q Consensus 392 ~~~~~a~~l~~~~~~ 406 (428)
+++++.+..++..++
T Consensus 134 ~l~~kl~~~~~~~~~ 148 (150)
T PF00731_consen 134 ELREKLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc
Confidence 888888888887763
No 202
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=47.13 E-value=27 Score=32.93 Aligned_cols=113 Identities=18% Similarity=0.179 Sum_probs=64.1
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHhhhccCCcCce
Q 014232 244 LYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGF 323 (428)
Q Consensus 244 v~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~ 323 (428)
|.-..||+. .+|++-++..+..++..+++++ |-.++...+ .-+.| |-.+=++
T Consensus 197 I~aGqgTig-------~EIl~ql~~~~~AI~vpVGGGG---------LiaGIat~v----k~~~p--------~vkIIGV 248 (457)
T KOG1250|consen 197 IWAGQGTIG-------LEILEQLKEPDGAIVVPVGGGG---------LIAGIATGV----KRVGP--------HVKIIGV 248 (457)
T ss_pred hhcCcchHH-------HHHHHhhcCCCCeEEEecCCch---------hHHHHHHHH----HHhCC--------CCceEEE
Confidence 666677775 5677766666556666677654 445542111 11222 4455556
Q ss_pred eeccccchhHHhhhcCCceec--cccccch------hhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCc
Q 014232 324 WSHCGWNSTLESICEGVPMIC--RPGFGDQ------RVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEK 388 (428)
Q Consensus 324 itHgG~~s~~eal~~GvP~v~--~P~~~DQ------~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~ 388 (428)
-|+ |..+...|+.+|.|+-. ++-++|- -.|+.++.+.+-..+. .++.+++..+|.++++++
T Consensus 249 Et~-~a~~f~~sl~~g~~V~lp~i~s~AdglaV~~Vg~~tf~~a~~~~d~vv---vV~~~ei~aaI~~l~ede 317 (457)
T KOG1250|consen 249 ETE-GAHSFNASLKAGKPVTLPKITSLADGLAVKTVGENTFELAQKLVDRVV---VVEDDEIAAAILRLFEDE 317 (457)
T ss_pred eec-CcHHHHHHHhcCCeeecccccchhcccccchhhHHHHHHHHhcCceEE---EeccHHHHHHHHHHHHhh
Confidence 666 67788888999888643 2333332 1223333221111111 467888999999998874
No 203
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=47.01 E-value=1.8e+02 Score=24.78 Aligned_cols=141 Identities=9% Similarity=0.029 Sum_probs=74.5
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhC-CCceEEeecChHhhhccC
Q 014232 240 PNSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVG-ENGCVVKWAPQKDVLSHI 318 (428)
Q Consensus 240 ~~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~v~~~~pq~~iL~~~ 318 (428)
.+.++.|+-|.++ ...++.|.+.+..+.++ ... +.+.+.+... .++.......+..-+..+
T Consensus 10 ~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VI-s~~----------~~~~l~~l~~~~~i~~~~~~~~~~~l~~a 71 (202)
T PRK06718 10 NKRVVIVGGGKVA-------GRRAITLLKYGAHIVVI-SPE----------LTENLVKLVEEGKIRWKQKEFEPSDIVDA 71 (202)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCeEEEE-cCC----------CCHHHHHHHhCCCEEEEecCCChhhcCCc
Confidence 4678999888776 33455566667666544 321 2222222222 223333444445567777
Q ss_pred CcCceeeccccchhHHhhh----cCCceeccccccchhhhH-----HHHhhhheeEEEcC--C--ccCHHHHHHHHHHHh
Q 014232 319 AVGGFWSHCGWNSTLESIC----EGVPMICRPGFGDQRVSA-----RYVSHVWRIGLQLE--N--DLEKGEVEKAVKQLM 385 (428)
Q Consensus 319 ~~~~~itHgG~~s~~eal~----~GvP~v~~P~~~DQ~~na-----~~v~~~~g~g~~l~--~--~~~~~~l~~ai~~vl 385 (428)
++ +|.--+--.+.+.++ .++++-+ .|.+..+ ..+.+. ++-+.+. + -.-+..|++.|.+++
T Consensus 72 dl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~g-~l~iaIsT~G~sP~la~~lr~~ie~~~ 144 (202)
T PRK06718 72 FL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHRG-KLTISVSTDGASPKLAKKIRDELEALY 144 (202)
T ss_pred eE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEcC-CeEEEEECCCCChHHHHHHHHHHHHHc
Confidence 87 888877766666654 4554433 3443332 222221 3333332 2 233355666666666
Q ss_pred cCchhHHHHHHHHHHHHHHHH
Q 014232 386 VEKEGQEMRQRAKNLKEDVEL 406 (428)
Q Consensus 386 ~~~~~~~~~~~a~~l~~~~~~ 406 (428)
. ++...+-+...++++.+++
T Consensus 145 ~-~~~~~~~~~~~~~R~~~k~ 164 (202)
T PRK06718 145 D-ESYESYIDFLYECRQKIKE 164 (202)
T ss_pred c-hhHHHHHHHHHHHHHHHHH
Confidence 3 2334566777777777764
No 204
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=46.67 E-value=51 Score=28.95 Aligned_cols=31 Identities=19% Similarity=0.123 Sum_probs=23.6
Q ss_pred CceEEE-EcCch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCII-YDELM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
-||+++ +|+.. --+..=|.++|||+|.+.-+
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDT 188 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVDT 188 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecC
Confidence 388876 77765 34566788999999998755
No 205
>PRK06270 homoserine dehydrogenase; Provisional
Probab=46.35 E-value=1.8e+02 Score=27.30 Aligned_cols=59 Identities=8% Similarity=0.077 Sum_probs=34.9
Q ss_pred ChHhhhccCCcCceee------ccc---cchhHHhhhcCCceec---cccccchhhhHHHHhhhheeEEEcC
Q 014232 310 PQKDVLSHIAVGGFWS------HCG---WNSTLESICEGVPMIC---RPGFGDQRVSARYVSHVWRIGLQLE 369 (428)
Q Consensus 310 pq~~iL~~~~~~~~it------HgG---~~s~~eal~~GvP~v~---~P~~~DQ~~na~~v~~~~g~g~~l~ 369 (428)
.-.++|.++++..+|- |+| .--+.+||.+|+++|+ -|+...-..-.+.. ++.|+.+...
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A-~~~g~~~~~e 150 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELA-KKNGVRFRYE 150 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHH-HHcCCEEEEe
Confidence 5567776555443655 443 4456899999999999 47754322222233 3346666654
No 206
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=46.22 E-value=17 Score=32.20 Aligned_cols=19 Identities=21% Similarity=0.370 Sum_probs=15.8
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
.|+++|+++||+|+++++.
T Consensus 24 ~L~kaL~~~G~~V~Vi~P~ 42 (245)
T PF08323_consen 24 SLPKALAKQGHDVRVIMPK 42 (245)
T ss_dssp HHHHHHHHTT-EEEEEEE-
T ss_pred HHHHHHHhcCCeEEEEEcc
Confidence 6899999999999999876
No 207
>PRK04940 hypothetical protein; Provisional
Probab=46.19 E-value=58 Score=27.26 Aligned_cols=31 Identities=29% Similarity=0.262 Sum_probs=26.9
Q ss_pred CceEEEEcCch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
+++++|-..+. +|+..+|+++|+|.|.+.++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPA 91 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPN 91 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCC
Confidence 35788877665 99999999999999999988
No 208
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=46.08 E-value=86 Score=28.93 Aligned_cols=133 Identities=15% Similarity=0.027 Sum_probs=71.5
Q ss_pred cEEE-EEeccccc--CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEe--ecChH-hhh
Q 014232 242 SVLY-VSLGSIVS--MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVK--WAPQK-DVL 315 (428)
Q Consensus 242 ~vv~-vsfGS~~~--~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~--~~pq~-~iL 315 (428)
+.|. +-.||... .+.+.+.++++.+.+.+.++++..++.. + ...-+.+.+.. .++.+.+ .+.+. .++
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e-----~~~~~~i~~~~-~~~~l~g~~sL~elaali 251 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH-E-----EQRAKRLAEGF-PYVEVLPKLSLEQVARVL 251 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH-H-----HHHHHHHHccC-CcceecCCCCHHHHHHHH
Confidence 3444 44444432 6788888998888766777655434321 0 00111121111 1222322 34444 588
Q ss_pred ccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcC----CccCHHHHHHHHHHHhc
Q 014232 316 SHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLE----NDLEKGEVEKAVKQLMV 386 (428)
Q Consensus 316 ~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~----~~~~~~~l~~ai~~vl~ 386 (428)
.++++ ||+. --|.++=|...|+|+|++=--.|...++-.-.. ..-.... ..++.+++.++++++|.
T Consensus 252 ~~a~l--~I~n-DSGp~HlA~A~g~p~valfGpt~p~~~~p~~~~--~~~~~~~~~cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 252 AGAKA--VVSV-DTGLSHLTAALDRPNITLYGPTDPGLIGGYGKN--QHACRSPGKSMADLSAETVFQKLETLIS 321 (322)
T ss_pred HhCCE--EEec-CCcHHHHHHHhCCCEEEEECCCCcccccCCCCC--ceeecCCCcccccCCHHHHHHHHHHHhh
Confidence 99999 9997 567788899999999986221222111100000 0001101 26889999888888763
No 209
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.07 E-value=1.9e+02 Score=26.25 Aligned_cols=113 Identities=14% Similarity=0.172 Sum_probs=60.8
Q ss_pred eEEeecChHh---hhccCCcCceeeccccchhHHhhhcCCceeccccccchhhhHH--HHhhhheeEEEcCC--ccCHHH
Q 014232 304 CVVKWAPQKD---VLSHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGDQRVSAR--YVSHVWRIGLQLEN--DLEKGE 376 (428)
Q Consensus 304 ~v~~~~pq~~---iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~--~v~~~~g~g~~l~~--~~~~~~ 376 (428)
.+++++||++ +|--|++-.+ =|--|...|..+|.|.+= +..-|..|+. .+.. -+++ ..-+.+
T Consensus 241 vklPFvpqddyd~LL~lcD~n~V---RGEDSFVRAq~agkPflW--HIYpQdentHl~KLea------Fldky~~~lp~~ 309 (370)
T COG4394 241 VKLPFVPQDDYDELLWLCDFNLV---RGEDSFVRAQLAGKPFLW--HIYPQDENTHLAKLEA------FLDKYCPFLPPN 309 (370)
T ss_pred EEecCCcHhHHHHHHHhccccee---ecchHHHHHHHcCCCcEE--EecCCccccHHHHHHH------HHHHhCCCCCHH
Confidence 4569999985 7777776222 377899999999999873 2345666653 3321 1221 111223
Q ss_pred HHHHHHHHhc----Cc---hhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 377 VEKAVKQLMV----EK---EGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 377 l~~ai~~vl~----~~---~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
..+++++... ++ .=+-+.++-+.+++..++-...-+..-..++++++++.+
T Consensus 310 ~a~alrt~~~~~N~~~ls~~w~~f~~~~~~~r~~a~~wa~~l~~~~dlaekLvaF~ek 367 (370)
T COG4394 310 TAKALRTFWIAWNAGRLSDDWSYFFKNLKEWREHAKKWANHLIKNPDLAEKLVAFIEK 367 (370)
T ss_pred HHHHHHHHHHHhcCCcccccHHHHHHhhHHHHHHHHHHHHHHccCccHHHHHHHHHHH
Confidence 3344444322 11 012344444444444444433444555666666666553
No 210
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=45.52 E-value=1.6e+02 Score=23.60 Aligned_cols=27 Identities=15% Similarity=0.310 Sum_probs=21.5
Q ss_pred Cceeecccc------chhHHhhhcCCceecccc
Q 014232 321 GGFWSHCGW------NSTLESICEGVPMICRPG 347 (428)
Q Consensus 321 ~~~itHgG~------~s~~eal~~GvP~v~~P~ 347 (428)
+.+++|+|- +.+.+|...++|+|++.-
T Consensus 61 ~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 61 GVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred EEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 348999774 478899999999999853
No 211
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=45.49 E-value=67 Score=26.40 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=21.3
Q ss_pred HHHHHHHHccCCCCCceEEEEcCchhhHH--HHHH-H--c-CCceEEEec
Q 014232 69 KCLVQMMKQQMPADEIVCIIYDELMYFAE--SAAN-Q--L-KLRSIILRT 112 (428)
Q Consensus 69 ~~l~~l~~~~~~~~~~D~vI~D~~~~~~~--~~A~-~--l-giP~v~~~~ 112 (428)
.-+.+++++. +||+||+-..++... ...+ + + ++|.+.+.|
T Consensus 79 ~~l~~~l~~~----~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 79 RRLIRLLREF----QPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHHHHHhhc----CCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 3444444444 899999776553333 2112 2 3 466665543
No 212
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=45.26 E-value=22 Score=27.39 Aligned_cols=20 Identities=10% Similarity=0.067 Sum_probs=15.6
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
++|+.+-++|||+|.++...
T Consensus 21 ~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 21 FALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp HHHHHHHHHTT-EEEEE-GG
T ss_pred HHHHHHHHHCCCEEEEEEcC
Confidence 46889999999999988766
No 213
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=44.17 E-value=38 Score=30.39 Aligned_cols=53 Identities=21% Similarity=0.183 Sum_probs=37.2
Q ss_pred cCCcCceeeccccchhHHhhh------cCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 317 HIAVGGFWSHCGWNSTLESIC------EGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 317 ~~~~~~~itHgG~~s~~eal~------~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
.+++ +|+-||=||++.+++ .++|++++-.. .+|.. ...+.+++.+++.+++.+
T Consensus 35 ~~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G--------------~lGFL--~~~~~~~~~~~l~~i~~g 93 (265)
T PRK04885 35 NPDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVHTG--------------HLGFY--TDWRPFEVDKLVIALAKD 93 (265)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEeCC--------------Cceec--ccCCHHHHHHHHHHHHcC
Confidence 4566 999999999999976 48898877210 12222 135677788888888765
No 214
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=44.09 E-value=29 Score=23.57 Aligned_cols=20 Identities=25% Similarity=0.423 Sum_probs=16.6
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
|..|..|+++|++|+++=..
T Consensus 9 l~aA~~L~~~g~~v~v~E~~ 28 (68)
T PF13450_consen 9 LAAAYYLAKAGYRVTVFEKN 28 (68)
T ss_dssp HHHHHHHHHTTSEEEEEESS
T ss_pred HHHHHHHHHCCCcEEEEecC
Confidence 56789999999999988644
No 215
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=43.82 E-value=51 Score=27.82 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=24.7
Q ss_pred eEEEEcCch-hhHHHHHHHcCCceEEEeccc
Q 014232 85 VCIIYDELM-YFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 85 D~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 114 (428)
.++|-..+. +++..+|+++++|.|.+.++-
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 577766665 888899999999999998773
No 216
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=43.47 E-value=2.1e+02 Score=24.74 Aligned_cols=35 Identities=17% Similarity=0.234 Sum_probs=24.1
Q ss_pred CceEEEEcCchhh-H-----HHHHHHcCCceEEEecccHHH
Q 014232 83 EIVCIIYDELMYF-A-----ESAANQLKLRSIILRTNSAAT 117 (428)
Q Consensus 83 ~~D~vI~D~~~~~-~-----~~~A~~lgiP~v~~~~~~~~~ 117 (428)
+--+||+|...+. + +..|..+..++.++....+..
T Consensus 73 kn~~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl~~plD 113 (261)
T COG4088 73 KNYLVIVDDTNYYKSMRRQLACEAKERKTTWCIIYLRTPLD 113 (261)
T ss_pred cceEEEEecccHHHHHHHHHHHHHHhcCCceEEEEEccCHH
Confidence 3469999987633 3 347888999988776654433
No 217
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=43.08 E-value=1e+02 Score=28.64 Aligned_cols=96 Identities=7% Similarity=0.042 Sum_probs=58.1
Q ss_pred CCcEEEEEecccc-c---CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCce-EEe--ecChH
Q 014232 240 PNSVLYVSLGSIV-S---MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGC-VVK--WAPQK 312 (428)
Q Consensus 240 ~~~vv~vsfGS~~-~---~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-v~~--~~pq~ 312 (428)
.++.|.+.-|+.. . .+.+.+.++++.+.+.+.+++.. ++.. +. ..-..+.+..+.+.. +.+ .+.+.
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~-e~-----~~~~~i~~~~~~~~~~l~g~~sL~el 245 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAK-DH-----PAGNEIEALLPGELRNLAGETSLDEA 245 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChh-hH-----HHHHHHHHhCCcccccCCCCCCHHHH
Confidence 3567877777742 2 67888888888887767776654 4321 00 011222222222211 222 23344
Q ss_pred -hhhccCCcCceeeccccchhHHhhhcCCceecc
Q 014232 313 -DVLSHIAVGGFWSHCGWNSTLESICEGVPMICR 345 (428)
Q Consensus 313 -~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~ 345 (428)
.++.++++ ||+. --|-++=|.+.|+|.|++
T Consensus 246 ~ali~~a~l--~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 246 VDLIALAKA--VVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHhCCE--EEee-CCHHHHHHHHcCCCEEEE
Confidence 58889998 9987 556778888999999975
No 218
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=42.56 E-value=30 Score=26.37 Aligned_cols=82 Identities=13% Similarity=0.155 Sum_probs=44.8
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHccCC
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQMP 80 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 80 (428)
++.+|+.|.+.|+.+. +++........ .|+....+.+....+. . + ...+.++.++.
T Consensus 15 ~~~~a~~l~~~G~~i~--aT~gTa~~L~~-~gi~~~~v~~~~~~~~--~-~----------------~~~i~~~i~~~-- 70 (116)
T cd01423 15 LLPTAQKLSKLGYKLY--ATEGTADFLLE-NGIPVTPVAWPSEEPQ--N-D----------------KPSLRELLAEG-- 70 (116)
T ss_pred HHHHHHHHHHCCCEEE--EccHHHHHHHH-cCCCceEeeeccCCCC--C-C----------------chhHHHHHHcC--
Confidence 3678999999999974 44433333333 2565544422100000 0 0 01223333333
Q ss_pred CCCceEEEEcCc---------hhhHHHHHHHcCCceE
Q 014232 81 ADEIVCIIYDEL---------MYFAESAANQLKLRSI 108 (428)
Q Consensus 81 ~~~~D~vI~D~~---------~~~~~~~A~~lgiP~v 108 (428)
++|+||.-+- .+.-...|-.+|||++
T Consensus 71 --~idlVIn~~~~~~~~~~~~~~~iRr~Av~~~ip~i 105 (116)
T cd01423 71 --KIDLVINLPSNRGKRVLDNDYVMRRAADDFAVPLI 105 (116)
T ss_pred --CceEEEECCCCCCCccccCcEeeehhhHhhCCccc
Confidence 8999997442 1334567888999996
No 219
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=42.30 E-value=1.2e+02 Score=28.35 Aligned_cols=97 Identities=9% Similarity=0.108 Sum_probs=58.4
Q ss_pred CcEEEEEeccccc---CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhC-CCce-EEe--ecChH-
Q 014232 241 NSVLYVSLGSIVS---MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVG-ENGC-VVK--WAPQK- 312 (428)
Q Consensus 241 ~~vv~vsfGS~~~---~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~-v~~--~~pq~- 312 (428)
++.|.+.-|+... .+.+.+.++++.|.+.+.++++.-+++..+. ..-..+.+... .++. ..+ -+.+.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~-----~~~~~i~~~~~~~~~~~l~g~~sL~el~ 257 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDL-----ACVNEIAQGCQTPPVTALAGKTTFPELG 257 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHH-----HHHHHHHHhcCCCccccccCCCCHHHHH
Confidence 4567777777543 6788888888888777777766533221000 00012221111 1111 222 23444
Q ss_pred hhhccCCcCceeeccccchhHHhhhcCCceecc
Q 014232 313 DVLSHIAVGGFWSHCGWNSTLESICEGVPMICR 345 (428)
Q Consensus 313 ~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~ 345 (428)
.++.++++ ||+. --|-++=|.+.|+|.|++
T Consensus 258 ali~~a~l--~v~n-DSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 258 ALIDHAQL--FIGV-DSAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 58899999 9998 557788888999999876
No 220
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=42.28 E-value=25 Score=29.45 Aligned_cols=19 Identities=11% Similarity=0.254 Sum_probs=15.6
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
.+.++..+|||+||-++-.
T Consensus 15 ~i~~EA~~RGHeVTAivRn 33 (211)
T COG2910 15 RILKEALKRGHEVTAIVRN 33 (211)
T ss_pred HHHHHHHhCCCeeEEEEeC
Confidence 4788999999999977644
No 221
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=42.03 E-value=45 Score=25.41 Aligned_cols=21 Identities=19% Similarity=0.464 Sum_probs=16.3
Q ss_pred CHHHHHHHHhCCCeEEEEeCC
Q 014232 1 MLQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~ 21 (428)
++.+|++|+++|++|+..-..
T Consensus 25 ~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 25 FLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred HHHHHHHHHHcCCcEEEEecc
Confidence 468999999999998844333
No 222
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=41.77 E-value=42 Score=30.85 Aligned_cols=55 Identities=15% Similarity=0.253 Sum_probs=39.4
Q ss_pred hhccCCcCceeeccccchhHHhhhc----CCceeccccccchhhhHHHHhhhhe-eEEEcCCccCHHHHHHHHHHHhcC
Q 014232 314 VLSHIAVGGFWSHCGWNSTLESICE----GVPMICRPGFGDQRVSARYVSHVWR-IGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 314 iL~~~~~~~~itHgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~g-~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
+...+++ +|+=||=||++.+.+. ++|++++ . .| +|. -..++.+++.+++.+++.+
T Consensus 65 ~~~~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGI--------------N-~G~lGF--Lt~~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 65 FDSSMKF--AIVLGGDGTVLSAARQLAPCGIPLLTI--------------N-TGHLGF--LTEAYLNQLDEAIDQVLAG 124 (305)
T ss_pred cccCcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEE--------------e-CCCCcc--cccCCHHHHHHHHHHHHcC
Confidence 3345666 9999999999999774 7898877 2 12 221 1246778888899888876
No 223
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=41.77 E-value=87 Score=25.69 Aligned_cols=27 Identities=11% Similarity=0.208 Sum_probs=22.5
Q ss_pred cCceeeccccc------hhHHhhhcCCceeccc
Q 014232 320 VGGFWSHCGWN------STLESICEGVPMICRP 346 (428)
Q Consensus 320 ~~~~itHgG~~------s~~eal~~GvP~v~~P 346 (428)
.+++++|+|-| ++++|...++|||++.
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34499998855 7889999999999995
No 224
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=41.43 E-value=82 Score=28.09 Aligned_cols=20 Identities=20% Similarity=0.466 Sum_probs=14.8
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
.++|.+|.++|+.|+|++.+
T Consensus 123 ~Ai~~~l~~~g~sv~f~~~~ 142 (254)
T COG1484 123 IAIGNELLKAGISVLFITAP 142 (254)
T ss_pred HHHHHHHHHcCCeEEEEEHH
Confidence 46777788778888877665
No 225
>cd01421 IMPCH Inosine monophosphate cyclohydrolase domain. This is the N-terminal domain in the purine biosynthesis pathway protein ATIC (purH). The bifunctional ATIC protein contains a C-terminal ATIC formylase domain that formylates 5-aminoimidazole-4-carboxamide-ribonucleotide. The IMPCH domain then converts the formyl-5-aminoimidazole-4-carboxamide-ribonucleotide to inosine monophosphate. This is the final step in de novo purine production.
Probab=41.33 E-value=29 Score=29.11 Aligned_cols=83 Identities=10% Similarity=0.060 Sum_probs=44.4
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCC--CCCCCC---CCcCCHHHHHHHHHHhhchhHHHHHHHHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPE--GLADDD---IYSGNIIAIIMHLNANCGAPFHKCLVQMM 75 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 75 (428)
++.||+.|.+.|+++. +|........+. |+.+..+.+ +.|+-. ..+..+ +...-+... ....+-+ ++.
T Consensus 13 l~~lAk~L~~lGf~I~--AT~GTAk~L~e~-GI~v~~V~k~TgfpE~l~GRVKTLHP-~ihggiL~~--~~~~~~~-~~~ 85 (187)
T cd01421 13 LVEFAKELVELGVEIL--STGGTAKFLKEA-GIPVTDVSDITGFPEILGGRVKTLHP-KIHGGILAR--RDNEEHK-DLE 85 (187)
T ss_pred HHHHHHHHHHCCCEEE--EccHHHHHHHHc-CCeEEEhhhccCCcHhhCCccccCCh-hhhhhhhcC--CCChhHH-HHH
Confidence 3679999999999974 455444555543 888877763 445432 112222 222222221 1122222 333
Q ss_pred HccCCCCCceEEEEcCc
Q 014232 76 KQQMPADEIVCIIYDEL 92 (428)
Q Consensus 76 ~~~~~~~~~D~vI~D~~ 92 (428)
+.. -. +.|+||++.+
T Consensus 86 ~~~-i~-~idlVvvNlY 100 (187)
T cd01421 86 EHG-IE-PIDLVVVNLY 100 (187)
T ss_pred HcC-CC-CeeEEEEccc
Confidence 322 23 6899999864
No 226
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=40.97 E-value=50 Score=32.43 Aligned_cols=57 Identities=21% Similarity=0.334 Sum_probs=37.7
Q ss_pred hhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHH---HHHHHHHHHhcCchhHHHHHHH
Q 014232 331 STLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKG---EVEKAVKQLMVEKEGQEMRQRA 397 (428)
Q Consensus 331 s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~---~l~~ai~~vl~~~~~~~~~~~a 397 (428)
++.||+++|+|+++. ++-.=+.-|+ +.-.|.-.+. +++ .+++++-++..| ++++.+.
T Consensus 381 v~IEAMa~glPvvAt----~~GGP~EiV~-~~~tG~l~dp--~~e~~~~~a~~~~kl~~~---p~l~~~~ 440 (495)
T KOG0853|consen 381 VPIEAMACGLPVVAT----NNGGPAEIVV-HGVTGLLIDP--GQEAVAELADALLKLRRD---PELWARM 440 (495)
T ss_pred eeHHHHhcCCCEEEe----cCCCceEEEE-cCCcceeeCC--chHHHHHHHHHHHHHhcC---HHHHHHH
Confidence 789999999999987 2222223332 2234665554 555 699999999999 5554443
No 227
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=40.73 E-value=19 Score=34.37 Aligned_cols=42 Identities=5% Similarity=0.048 Sum_probs=25.8
Q ss_pred chhHHHHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEE
Q 014232 64 GAPFHKCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSII 109 (428)
Q Consensus 64 ~~~l~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~ 109 (428)
...+...+.++.++. ++|+|++.....+........++|.+.
T Consensus 89 ~~~~~~~l~~~~~~~----~~D~v~~~~~~~~~~~~~~~~~~p~i~ 130 (397)
T TIGR03087 89 SRRLARWVNALLAAE----PVDAIVVFSSAMAQYVTPHVRGVPRIV 130 (397)
T ss_pred CHHHHHHHHHHHhhC----CCCEEEEeccccceeccccccCCCeEe
Confidence 344556677776664 899999986433222112345788886
No 228
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=40.70 E-value=48 Score=29.55 Aligned_cols=31 Identities=10% Similarity=-0.023 Sum_probs=24.5
Q ss_pred CceEEEEcCch------hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELM------YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~------~~~~~~A~~lgiP~v~~~~~ 113 (428)
.||+|++-... .-+..+|+.||+|++.+...
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 79999975443 24678999999999998765
No 229
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=40.70 E-value=25 Score=29.23 Aligned_cols=32 Identities=22% Similarity=0.188 Sum_probs=21.8
Q ss_pred ccCCcCceeeccccchhHHhhhcCCceeccccccc
Q 014232 316 SHIAVGGFWSHCGWNSTLESICEGVPMICRPGFGD 350 (428)
Q Consensus 316 ~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~D 350 (428)
..+++ +|+.||......... ++|+|-+|..+-
T Consensus 33 ~g~dV--iIsRG~ta~~lr~~~-~iPVV~I~~s~~ 64 (176)
T PF06506_consen 33 EGADV--IISRGGTAELLRKHV-SIPVVEIPISGF 64 (176)
T ss_dssp TT-SE--EEEEHHHHHHHHCC--SS-EEEE---HH
T ss_pred cCCeE--EEECCHHHHHHHHhC-CCCEEEECCCHh
Confidence 44555 999999999998877 999999998653
No 230
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=40.55 E-value=1e+02 Score=28.77 Aligned_cols=96 Identities=7% Similarity=0.003 Sum_probs=58.7
Q ss_pred CCcEEEEEecccc--c--CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCC----Cce-EEe--e
Q 014232 240 PNSVLYVSLGSIV--S--MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGE----NGC-VVK--W 308 (428)
Q Consensus 240 ~~~vv~vsfGS~~--~--~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~----~~~-v~~--~ 308 (428)
+++.|.+..|+.. . .+.+.+.++++.|...+.++++. ++.. +. ..-..+.+..+. ++. +.+ -
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~-e~-----~~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLF-GSAK-DH-----EAGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEE-eCHH-hH-----HHHHHHHHhcccccccceeeccCCCC
Confidence 4567888888742 2 67888889998887667776654 4321 00 011222222111 111 222 2
Q ss_pred cChH-hhhccCCcCceeeccccchhHHhhhcCCceecc
Q 014232 309 APQK-DVLSHIAVGGFWSHCGWNSTLESICEGVPMICR 345 (428)
Q Consensus 309 ~pq~-~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~ 345 (428)
+.+. .++.++++ ||+. --|-++=|.+.|+|+|++
T Consensus 252 L~el~ali~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 252 LEQAVILIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 3344 48899998 9987 567788899999999975
No 231
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=40.53 E-value=1.3e+02 Score=26.75 Aligned_cols=82 Identities=13% Similarity=0.022 Sum_probs=44.6
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHccCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQMPA 81 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 81 (428)
.+||++|...++.+++.+...+-.......+-. ..+-..=.+-+.+++++.
T Consensus 15 r~la~~L~~~~~~~~~ss~t~~g~~l~~~~~~~--------------------------~~~G~l~~e~l~~~l~e~--- 65 (257)
T COG2099 15 RALAKKLAAAPVDIILSSLTGYGAKLAEQIGPV--------------------------RVGGFLGAEGLAAFLREE--- 65 (257)
T ss_pred HHHHHHhhccCccEEEEEcccccccchhccCCe--------------------------eecCcCCHHHHHHHHHHc---
Confidence 368999999998877766553333222110000 000000112333444443
Q ss_pred CCceEEE--EcCchh----hHHHHHHHcCCceEEEecc
Q 014232 82 DEIVCII--YDELMY----FAESAANQLKLRSIILRTN 113 (428)
Q Consensus 82 ~~~D~vI--~D~~~~----~~~~~A~~lgiP~v~~~~~ 113 (428)
+.|+|| +++|.. -+..+|+..|||++.|---
T Consensus 66 -~i~llIDATHPyAa~iS~Na~~aake~gipy~r~eRP 102 (257)
T COG2099 66 -GIDLLIDATHPYAARISQNAARAAKETGIPYLRLERP 102 (257)
T ss_pred -CCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEEECC
Confidence 788887 444431 1345788999999998644
No 232
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=40.11 E-value=24 Score=30.75 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=22.0
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPN 26 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~ 26 (428)
+.||.+|+++|-.|+++=.++|++.
T Consensus 20 ~~LAs~la~~G~~V~lIDaDpn~pl 44 (231)
T PF07015_consen 20 MALASELAARGARVALIDADPNQPL 44 (231)
T ss_pred HHHHHHHHHCCCeEEEEeCCCCCcH
Confidence 6799999999999999988887754
No 233
>PRK12342 hypothetical protein; Provisional
Probab=39.89 E-value=61 Score=28.88 Aligned_cols=31 Identities=13% Similarity=0.055 Sum_probs=24.5
Q ss_pred CceEEEEcCch------hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELM------YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~------~~~~~~A~~lgiP~v~~~~~ 113 (428)
+||+|++-... --+..+|+.||+|++.+...
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~ 145 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSK 145 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEE
Confidence 79999975543 23688999999999998755
No 234
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=39.87 E-value=1.1e+02 Score=29.68 Aligned_cols=26 Identities=12% Similarity=-0.036 Sum_probs=21.9
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEe
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 111 (428)
+||++|.... +..+|+++|||.+.+.
T Consensus 355 ~pDllig~s~---~~~~A~k~gIP~vr~g 380 (422)
T TIGR02015 355 EPDLAIGTTP---LVQFAKEHGIPALYFT 380 (422)
T ss_pred CCCEEEcCCc---chHHHHHcCCCEEEec
Confidence 8999998853 6678999999998865
No 235
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=39.17 E-value=1.9e+02 Score=26.50 Aligned_cols=54 Identities=19% Similarity=0.201 Sum_probs=39.0
Q ss_pred ccCCcCceeeccccchhHHhhh----cCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 316 SHIAVGGFWSHCGWNSTLESIC----EGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 316 ~~~~~~~~itHgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
..+++ +|+=||=||++++.. .++|++++... .+|.. ...+.+++.++|.+++++
T Consensus 61 ~~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl--~~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 61 EVCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFL--TDIRPDELEFKLAEVLDG 118 (295)
T ss_pred cCCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------ccccc--ccCCHHHHHHHHHHHHcC
Confidence 34667 999999999999975 36788877431 12211 247788999999999876
No 236
>PF02433 FixO: Cytochrome C oxidase, mono-heme subunit/FixO; InterPro: IPR003468 Cytochrome cbb3 oxidases are found almost exclusively in Proteobacteria, and represent a distinctive class of proton-pumping respiratory haem-copper oxidases (HCO) that lack many of the key structural features that contribute to the reaction cycle of the intensely studied mitochondrial cytochrome c oxidase (CcO) []. Cytochrome cbb3 oxidases are required both to support symbiotic nitrogen fixation, whilst ensuring that the oxygen-labile nitrogenase is not compromised. Cytochrome cbb3 oxidases consist of four subunits: FixN (or CcoN), FixO (or CcoO), FixP (or CcoP) and FixQ (or CcoQ). The catalytic core is comprised of subunits FixN, FixO and FixP, where FixN acts as the catalytic subunit, and Fix O and FixP are membrane-bound mono- and di-haem cytochromes c, respectively. The FixQ subunit protects the core complex in the presence of oxygen from proteolytic degradation []. This entry represents the mono-haem FixO subunit.
Probab=38.78 E-value=53 Score=28.37 Aligned_cols=90 Identities=10% Similarity=0.144 Sum_probs=47.9
Q ss_pred hhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH----hcC
Q 014232 336 ICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCI----KES 411 (428)
Q Consensus 336 l~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~----~~~ 411 (428)
+.-|-.|=..|+..++..+...+.+.+.+=..+.--.+.+++.++...+-...+ ...+ +..+.++..++. ...
T Consensus 128 v~p~SiMP~Y~~L~~~~~d~~~~~~~~~~l~~lgvPY~~~~i~~a~~~~~~qa~--~~~~-~~~~~~~~~~~~~~~~~~~ 204 (226)
T PF02433_consen 128 VVPGSIMPSYPWLFENKLDGEDIQAKMKALRTLGVPYTDEEIANAPADVEGQAK--PIAD-ADDLVERYKKAQARGFDGE 204 (226)
T ss_pred hCCCCCCCCChhHhhccCcHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhccc--cccc-HHHHHHHhhhhhhcccccC
Confidence 334445566677777766665554432222222224778888888876654321 1111 222222221111 123
Q ss_pred CChHHHHHHHHHHhhcC
Q 014232 412 GSSSSSLNKFLEFFNLF 428 (428)
Q Consensus 412 g~~~~~~~~~~~~~~~~ 428 (428)
.+....++.||.+|++|
T Consensus 205 ~~~~~Ei~ALIAYLQ~L 221 (226)
T PF02433_consen 205 PGEDTEIVALIAYLQRL 221 (226)
T ss_pred CCCccHHHHHHHHHHHc
Confidence 35568899999999987
No 237
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=38.66 E-value=84 Score=28.17 Aligned_cols=24 Identities=17% Similarity=0.156 Sum_probs=18.8
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPN 26 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~ 26 (428)
.+|++.|.+.| +|+++.|...++-
T Consensus 17 ~aL~~al~~~g-~V~VvAP~~eqSg 40 (266)
T PRK13934 17 RLLYEFVSPLG-EVDVVAPETPKSA 40 (266)
T ss_pred HHHHHHHHhCC-cEEEEccCCCCcc
Confidence 57899998888 7998888766543
No 238
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=38.51 E-value=65 Score=28.20 Aligned_cols=20 Identities=20% Similarity=0.360 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
.+||+.|.++||+|+++...
T Consensus 30 ~aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 30 KIIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred HHHHHHHHhCCCEEEEEECc
Confidence 37899999999999988644
No 239
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=38.19 E-value=44 Score=27.77 Aligned_cols=41 Identities=12% Similarity=0.206 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEeccc
Q 014232 66 PFHKCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 66 ~l~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~ 114 (428)
.+...++++.+. ++|+||-+.. +..+|+++|+|++.+.++.
T Consensus 113 e~~~~i~~~~~~-----G~~viVGg~~---~~~~A~~~gl~~v~i~sg~ 153 (176)
T PF06506_consen 113 EIEAAIKQAKAE-----GVDVIVGGGV---VCRLARKLGLPGVLIESGE 153 (176)
T ss_dssp HHHHHHHHHHHT-----T--EEEESHH---HHHHHHHTTSEEEESS--H
T ss_pred HHHHHHHHHHHc-----CCcEEECCHH---HHHHHHHcCCcEEEEEecH
Confidence 344566666654 6999999974 5789999999999987753
No 240
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=38.06 E-value=44 Score=28.36 Aligned_cols=31 Identities=16% Similarity=0.110 Sum_probs=24.1
Q ss_pred CceEEE-EcCch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCII-YDELM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
.||+|| +|+.. .-+..=|.++|||+|.+.-+
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DT 140 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCDT 140 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEeeC
Confidence 578776 77765 45667799999999998755
No 241
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=37.93 E-value=97 Score=22.67 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=25.0
Q ss_pred CceEEE--EcCch----hhHHHHHHHcCCceEEEecccHHH
Q 014232 83 EIVCII--YDELM----YFAESAANQLKLRSIILRTNSAAT 117 (428)
Q Consensus 83 ~~D~vI--~D~~~----~~~~~~A~~lgiP~v~~~~~~~~~ 117 (428)
++|+|| +|... ..+-..|++.++|++.....+...
T Consensus 48 ~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~~~~~~ 88 (97)
T PF10087_consen 48 KADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRSRGVSS 88 (97)
T ss_pred CCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECCCCHHH
Confidence 578876 66654 234568899999999998666543
No 242
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=37.85 E-value=1.2e+02 Score=28.32 Aligned_cols=95 Identities=11% Similarity=0.034 Sum_probs=58.8
Q ss_pred CcEEEEEec-cccc---CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEe--ecChH-h
Q 014232 241 NSVLYVSLG-SIVS---MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVK--WAPQK-D 313 (428)
Q Consensus 241 ~~vv~vsfG-S~~~---~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~--~~pq~-~ 313 (428)
++.|.++-| |... .+.+.+.++++.+.+.+.++++. +++. +. ..-+.+.+.......+.+ -+.|. .
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~-g~~~-e~-----e~~~~i~~~~~~~~~l~~k~sL~e~~~ 247 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLF-GGPD-EE-----ERAEEIAKGLPNAVILAGKTSLEELAA 247 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEe-cChH-HH-----HHHHHHHHhcCCccccCCCCCHHHHHH
Confidence 567888888 4422 78899999999999988665554 3321 10 011222222222222333 33344 4
Q ss_pred hhccCCcCceeeccccchhHHhhhcCCceecc
Q 014232 314 VLSHIAVGGFWSHCGWNSTLESICEGVPMICR 345 (428)
Q Consensus 314 iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~ 345 (428)
++.++++ ||+. -.|-++=|-+.|+|.|++
T Consensus 248 li~~a~l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 248 LIAGADL--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred HHhcCCE--EEcc-CChHHHHHHHcCCCEEEE
Confidence 7778888 8876 556777788899999986
No 243
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=37.77 E-value=55 Score=29.78 Aligned_cols=58 Identities=12% Similarity=0.087 Sum_probs=39.3
Q ss_pred HhhhccCCcCceeeccccchhHHhhh----cCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 312 KDVLSHIAVGGFWSHCGWNSTLESIC----EGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 312 ~~iL~~~~~~~~itHgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
.++...+++ +|+-||=||++.+.+ .++|++++-.. .+|.. ..++.+++.+++.+++.+
T Consensus 59 ~~~~~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL--t~~~~~~~~~~l~~i~~g 120 (287)
T PRK14077 59 DELFKISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG--------------HLGFL--TDITVDEAEKFFQAFFQG 120 (287)
T ss_pred hhcccCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC--------------CcccC--CcCCHHHHHHHHHHHHcC
Confidence 334445677 999999999998866 37888876210 12221 246778888888888775
No 244
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=37.33 E-value=48 Score=27.18 Aligned_cols=38 Identities=16% Similarity=0.188 Sum_probs=27.0
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPE 40 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~ 40 (428)
+.++..|.++|+.|-=+.++.....-.. .|++.+.+..
T Consensus 23 ~ki~e~L~~~g~kvgGf~t~EVR~gGkR-~GF~Ivdl~t 60 (179)
T COG1618 23 LKIAEKLREKGYKVGGFITPEVREGGKR-IGFKIVDLAT 60 (179)
T ss_pred HHHHHHHHhcCceeeeEEeeeeecCCeE-eeeEEEEccC
Confidence 5788999999999985555544433333 3888888873
No 245
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=37.14 E-value=53 Score=22.89 Aligned_cols=21 Identities=19% Similarity=0.290 Sum_probs=18.1
Q ss_pred HHHHHHHHhCCCeEEEEeCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDF 22 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~ 22 (428)
+++|..|+++|.+||++....
T Consensus 12 ~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 12 IELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp HHHHHHHHHTTSEEEEEESSS
T ss_pred HHHHHHHHHhCcEEEEEeccc
Confidence 578999999999999987663
No 246
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=36.93 E-value=52 Score=27.41 Aligned_cols=30 Identities=10% Similarity=-0.023 Sum_probs=20.9
Q ss_pred CceEEEEcCchhh--HHHHHHHcCCceEEEec
Q 014232 83 EIVCIIYDELMYF--AESAANQLKLRSIILRT 112 (428)
Q Consensus 83 ~~D~vI~D~~~~~--~~~~A~~lgiP~v~~~~ 112 (428)
+||+||....... ....-++.|||++.+..
T Consensus 69 ~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~~ 100 (186)
T cd01141 69 KPDLVILYGGFQAQTILDKLEQLGIPVLYVNE 100 (186)
T ss_pred CCCEEEEecCCCchhHHHHHHHcCCCEEEeCC
Confidence 7999998654322 33445679999988753
No 247
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=36.91 E-value=2.3e+02 Score=26.50 Aligned_cols=29 Identities=14% Similarity=0.019 Sum_probs=23.1
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 113 (428)
+.|++|+.. .....+|..+|+|++.++..
T Consensus 261 ~a~l~I~nD--TGp~HlAaA~g~P~valfGp 289 (348)
T PRK10916 261 ACKAIVTND--SGLMHVAAALNRPLVALYGP 289 (348)
T ss_pred hCCEEEecC--ChHHHHHHHhCCCEEEEECC
Confidence 579999653 35788999999999998753
No 248
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=36.90 E-value=1.2e+02 Score=28.57 Aligned_cols=95 Identities=9% Similarity=0.110 Sum_probs=54.6
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCch-hHHH-hhCCCce---------------
Q 014232 242 SVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPE-GFEE-AVGENGC--------------- 304 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~-~~~~-~~~~~~~--------------- 304 (428)
.+++.+-||-...-+. -++++.|++.++.++|+....+.+. +.+|. ++.- ..+...+
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e~----~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 76 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIEK----TIIEKENIPYYSISSGKLRRYFDLKNIKDPFLV 76 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCcccc----ccCcccCCcEEEEeccCcCCCchHHHHHHHHHH
Confidence 4777777887765554 3467777777899999865543221 11222 1100 0000000
Q ss_pred EEeecChHhhhc--cCCcCceeeccccch---hHHhhhcCCceec
Q 014232 305 VVKWAPQKDVLS--HIAVGGFWSHCGWNS---TLESICEGVPMIC 344 (428)
Q Consensus 305 v~~~~pq~~iL~--~~~~~~~itHgG~~s---~~eal~~GvP~v~ 344 (428)
...++--..++. +|++ +|+|||+=| ++.|...|+|+++
T Consensus 77 ~~~~~~~~~i~~~~kPdv--vi~~Ggy~s~p~~~aa~~~~~p~~i 119 (352)
T PRK12446 77 MKGVMDAYVRIRKLKPDV--IFSKGGFVSVPVVIGGWLNRVPVLL 119 (352)
T ss_pred HHHHHHHHHHHHhcCCCE--EEecCchhhHHHHHHHHHcCCCEEE
Confidence 001111112344 5677 999999986 8999999999986
No 249
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=36.29 E-value=66 Score=29.38 Aligned_cols=57 Identities=16% Similarity=0.219 Sum_probs=39.0
Q ss_pred hhhccCCcCceeeccccchhHHhhhc----CCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 313 DVLSHIAVGGFWSHCGWNSTLESICE----GVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 313 ~iL~~~~~~~~itHgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
++-..+++ +|+-||=||+++++.. ++|++++-.. .+|... ..+.+++.+++.+++.+
T Consensus 59 ~~~~~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~G--------------~lGFL~--~~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 59 EIGARADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINHG--------------RLGFIT--DIPLDDMQETLPPMLAG 119 (291)
T ss_pred HhccCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------Cccccc--cCCHHHHHHHHHHHHcC
Confidence 33345677 9999999999999774 6788876210 122221 46678888888888765
No 250
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=35.72 E-value=51 Score=28.19 Aligned_cols=31 Identities=16% Similarity=0.048 Sum_probs=23.9
Q ss_pred CceEEE-EcCch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCII-YDELM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
.||+|| +|+.. .-+..=|.++|||+|.+.-+
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDT 146 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDT 146 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEeC
Confidence 578877 77765 45666789999999998755
No 251
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=35.69 E-value=86 Score=26.50 Aligned_cols=31 Identities=19% Similarity=0.135 Sum_probs=24.4
Q ss_pred CceEEEE-cCc-hhhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIY-DEL-MYFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~-D~~-~~~~~~~A~~lgiP~v~~~~~ 113 (428)
++|+|+. +.- .+.+..+|..+|+|.++..-.
T Consensus 50 ~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK~ 82 (189)
T PRK09219 50 GITKILTIEASGIAPAVMAALALGVPVVFAKKK 82 (189)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEEC
Confidence 6899984 333 377889999999999988754
No 252
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=35.60 E-value=1.2e+02 Score=28.55 Aligned_cols=84 Identities=14% Similarity=0.097 Sum_probs=46.0
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCC--CCCCceEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHHHHHccC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPNPS--NHPKFSFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQMMKQQM 79 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~~~--~~~gi~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 79 (428)
+.|++.|.++||++++++......... ...|++++.++.... .... .+. .+..++.+.
T Consensus 21 ~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~-~~~--------~l~~~l~~~----- 80 (374)
T TIGR03088 21 VNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYALHKQPG------KDVA-VYP--------QLYRLLRQL----- 80 (374)
T ss_pred HHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEeCCCCC------CChH-HHH--------HHHHHHHHh-----
Confidence 578999999999988887432111111 113788887753210 1111 000 111222222
Q ss_pred CCCCceEEEEcCch-hhHHHHHHHcCCceE
Q 014232 80 PADEIVCIIYDELM-YFAESAANQLKLRSI 108 (428)
Q Consensus 80 ~~~~~D~vI~D~~~-~~~~~~A~~lgiP~v 108 (428)
+||+|-+.... .++..++...++|..
T Consensus 81 ---~~Divh~~~~~~~~~~~~~~~~~~~~~ 107 (374)
T TIGR03088 81 ---RPDIVHTRNLAALEAQLPAALAGVPAR 107 (374)
T ss_pred ---CCCEEEEcchhHHHHHHHHHhcCCCeE
Confidence 79999876543 334456677888863
No 253
>PLN02929 NADH kinase
Probab=35.51 E-value=54 Score=30.02 Aligned_cols=66 Identities=8% Similarity=0.095 Sum_probs=42.3
Q ss_pred ccCCcCceeeccccchhHHhhh---cCCceeccccccc------hhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhc
Q 014232 316 SHIAVGGFWSHCGWNSTLESIC---EGVPMICRPGFGD------QRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMV 386 (428)
Q Consensus 316 ~~~~~~~~itHgG~~s~~eal~---~GvP~v~~P~~~D------Q~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~ 386 (428)
..+++ +|+-||=||++.|.+ .++|++++-.... ++.|.-.. . ...|..- ..+.+++.+++.+++.
T Consensus 63 ~~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~~-~-r~lGfL~--~~~~~~~~~~L~~il~ 136 (301)
T PLN02929 63 RDVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFDA-R-RSTGHLC--AATAEDFEQVLDDVLF 136 (301)
T ss_pred CCCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCccccccccccccccc-c-cCccccc--cCCHHHHHHHHHHHHc
Confidence 45567 999999999999855 4789888744321 22222111 0 0133222 3678899999999997
Q ss_pred C
Q 014232 387 E 387 (428)
Q Consensus 387 ~ 387 (428)
+
T Consensus 137 g 137 (301)
T PLN02929 137 G 137 (301)
T ss_pred C
Confidence 6
No 254
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=35.07 E-value=11 Score=35.76 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=19.6
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCC
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNS 24 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~ 24 (428)
+|+++..|+++| .|.|++.+...
T Consensus 110 LLQva~~lA~~~-~vLYVsGEES~ 132 (456)
T COG1066 110 LLQVAARLAKRG-KVLYVSGEESL 132 (456)
T ss_pred HHHHHHHHHhcC-cEEEEeCCcCH
Confidence 478999999999 99999998544
No 255
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=35.06 E-value=65 Score=31.75 Aligned_cols=53 Identities=8% Similarity=0.139 Sum_probs=38.8
Q ss_pred ccCCcCceeeccccchhHHhhhc----CCceeccccccchhhhHHHHhhhhe-eEEEcCCccCHHHHHHHHHHHhcC
Q 014232 316 SHIAVGGFWSHCGWNSTLESICE----GVPMICRPGFGDQRVSARYVSHVWR-IGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 316 ~~~~~~~~itHgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~g-~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
..+++ +|+=||=||++.|... ++|++++ . .| +|.. ..++.+++.+++.+++.+
T Consensus 261 ~~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGI--------------N-~G~LGFL--t~i~~~e~~~~Le~il~G 318 (508)
T PLN02935 261 TKVDL--VITLGGDGTVLWAASMFKGPVPPVVPF--------------S-MGSLGFM--TPFHSEQYRDCLDAILKG 318 (508)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhccCCCcEEEE--------------e-CCCccee--cccCHHHHHHHHHHHHcC
Confidence 45666 9999999999999774 5677766 2 22 3332 246788899999998876
No 256
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=35.05 E-value=99 Score=25.41 Aligned_cols=30 Identities=20% Similarity=0.300 Sum_probs=22.4
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHhC
Q 014232 240 PNSVLYVSLGSIVSMDKKELKEMAWGLYNS 269 (428)
Q Consensus 240 ~~~vv~vsfGS~~~~~~~~~~~~~~al~~~ 269 (428)
....||+++||......+.++..++.|...
T Consensus 6 ~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 6 ASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred cCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 345699999999876666677777777664
No 257
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=34.99 E-value=3.8e+02 Score=25.51 Aligned_cols=22 Identities=32% Similarity=0.508 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC
Q 014232 391 QEMRQRAKNLKEDVELCIKESG 412 (428)
Q Consensus 391 ~~~~~~a~~l~~~~~~~~~~~g 412 (428)
..||+|.++|+..+.+++++.|
T Consensus 312 ~~Mr~Ri~~mR~~lv~~L~~~~ 333 (396)
T COG1448 312 EEMRQRILEMRQALVDALKALG 333 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 5799999999999998876633
No 258
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=34.50 E-value=51 Score=20.28 Aligned_cols=26 Identities=23% Similarity=0.392 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 014232 373 EKGEVEKAVKQLMVEKEGQEMRQRAKNL 400 (428)
Q Consensus 373 ~~~~l~~ai~~vl~~~~~~~~~~~a~~l 400 (428)
++++|..||..|..++ -++++.|+.+
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 5788999999888653 4677777654
No 259
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=34.46 E-value=1e+02 Score=28.76 Aligned_cols=81 Identities=20% Similarity=0.187 Sum_probs=61.7
Q ss_pred CCceE-EeecChH---hhhccCCcCceeec--cccchhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCC-ccC
Q 014232 301 ENGCV-VKWAPQK---DVLSHIAVGGFWSH--CGWNSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLEN-DLE 373 (428)
Q Consensus 301 ~~~~v-~~~~pq~---~iL~~~~~~~~itH--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~-~~~ 373 (428)
+|+.+ .+++|-+ .+|..++++-|.+. =|+|++.-.|+.|+|.+.- .+-+.|-... + .|+=+.... .++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~~l~-~-~~ipVlf~~d~L~ 319 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQDLK-E-QGIPVLFYGDELD 319 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHHHHH-h-CCCeEEeccccCC
Confidence 35554 4788755 58999999777664 5899999999999999965 5666665555 4 377776664 899
Q ss_pred HHHHHHHHHHHhc
Q 014232 374 KGEVEKAVKQLMV 386 (428)
Q Consensus 374 ~~~l~~ai~~vl~ 386 (428)
...++++=+++..
T Consensus 320 ~~~v~ea~rql~~ 332 (360)
T PF07429_consen 320 EALVREAQRQLAN 332 (360)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887764
No 260
>PF02016 Peptidase_S66: LD-carboxypeptidase; InterPro: IPR003507 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This signature is found in the Escherichia coli microcin C7 self-immunity protein mccF and in muramoyltetrapeptide carboxypeptidase (3.4.17.13 from EC, LD-carboxypeptidase A). LD-carboxypeptidase A belongs to MEROPS peptidase family S66 (clan SS). The entry also contains uncharacterised proteins including hypothetical proteins from various bacteria archaea.; PDB: 1ZRS_A 1ZL0_B 2AUM_B 2AUN_B 3TLG_A 3TLC_A 3TLZ_B 3TLY_B 3TLE_A 3TLB_B ....
Probab=34.07 E-value=33 Score=31.16 Aligned_cols=76 Identities=8% Similarity=0.175 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHhhhccCCcCceeeccccchhH
Q 014232 254 MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTL 333 (428)
Q Consensus 254 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~ 333 (428)
.+.+..+.+.+|+.....+.||.++++.. . . .+.++++...|-.||+. ||-..-..+.+
T Consensus 46 s~~~Ra~dL~~a~~d~~i~aI~~~rGGyg----------~-~--------rlL~~ld~~~i~~~pK~--~iGySDiTaL~ 104 (284)
T PF02016_consen 46 SDEERAEDLNEAFADPEIDAIWCARGGYG----------A-N--------RLLPYLDYDAIRKNPKI--FIGYSDITALH 104 (284)
T ss_dssp -HHHHHHHHHHHHHSTTEEEEEES--SS-----------G-G--------GGGGGCHHHHHHHSG-E--EEE-GGGHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEeecccc----------H-H--------HHHhcccccccccCCCE--EEEecchHHHH
Confidence 45566788999999999999998876521 1 1 45677777778788888 88888887777
Q ss_pred Hhhhc--CCceeccccccc
Q 014232 334 ESICE--GVPMICRPGFGD 350 (428)
Q Consensus 334 eal~~--GvP~v~~P~~~D 350 (428)
-+++. |.+.+--|+..+
T Consensus 105 ~al~~~~g~~t~hGp~~~~ 123 (284)
T PF02016_consen 105 NALYAKTGLVTFHGPMLSS 123 (284)
T ss_dssp HHHHHHHTBEEEES--HHH
T ss_pred HHHHHhCCCeEEEcchhhh
Confidence 77654 777777776543
No 261
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=34.06 E-value=1.4e+02 Score=21.93 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=23.9
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhC--CCCeEEE
Q 014232 242 SVLYVSLGSIVSMDKKELKEMAWGLYNS--KQPFLWV 276 (428)
Q Consensus 242 ~vv~vsfGS~~~~~~~~~~~~~~al~~~--~~~~iw~ 276 (428)
++|+|+.||........+..+.+.+++. ...+-+.
T Consensus 1 ~ivlv~hGS~~~~~~~~~~~l~~~l~~~~~~~~v~~a 37 (101)
T cd03416 1 ALLLVGHGSRDPRAAEALEALAERLRERLPGDEVELA 37 (101)
T ss_pred CEEEEEcCCCCHHHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 3789999998765556677788888654 3445444
No 262
>PF09001 DUF1890: Domain of unknown function (DUF1890); InterPro: IPR012033 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. The structure of the Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) protein has been determined but no evidence as to the function is available yet.; PDB: 1KJN_B.
Probab=33.79 E-value=30 Score=27.21 Aligned_cols=20 Identities=35% Similarity=0.446 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
+-|+..|.++||+|++.+++
T Consensus 17 lYl~~~Lk~~G~~v~Va~np 36 (139)
T PF09001_consen 17 LYLSYKLKKKGFEVVVAGNP 36 (139)
T ss_dssp HHHHHHHHCTTEEEEEEE-H
T ss_pred HHHHHHHHhcCCeEEEecCH
Confidence 55788999999999999887
No 263
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=33.79 E-value=64 Score=30.37 Aligned_cols=29 Identities=10% Similarity=-0.048 Sum_probs=22.1
Q ss_pred CceEEEEcC--ch-hhHHHHHHHcCCceEEEe
Q 014232 83 EIVCIIYDE--LM-YFAESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI~D~--~~-~~~~~~A~~lgiP~v~~~ 111 (428)
+||+|++.. .. .++..+|..+|||++.+.
T Consensus 86 ~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~ 117 (365)
T TIGR00236 86 KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVE 117 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEe
Confidence 799999753 32 557788999999997653
No 264
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=33.78 E-value=46 Score=27.48 Aligned_cols=19 Identities=26% Similarity=0.412 Sum_probs=15.8
Q ss_pred HHHHHHHHhCCCeEEEEeC
Q 014232 2 LQLGTILYSKGFSITVVHT 20 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~ 20 (428)
+.+|++|+++|++|+++..
T Consensus 42 l~~AR~L~~~G~~V~v~~~ 60 (169)
T PF03853_consen 42 LVAARHLANRGYNVTVYLV 60 (169)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEEE
Confidence 5789999999999998443
No 265
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=33.78 E-value=86 Score=28.32 Aligned_cols=49 Identities=18% Similarity=0.296 Sum_probs=37.0
Q ss_pred hchhHHHHHHHHHHccCCCCCceEEEEcCch----hh-HHHHHHHcCCceEEEeccc
Q 014232 63 CGAPFHKCLVQMMKQQMPADEIVCIIYDELM----YF-AESAANQLKLRSIILRTNS 114 (428)
Q Consensus 63 ~~~~l~~~l~~l~~~~~~~~~~D~vI~D~~~----~~-~~~~A~~lgiP~v~~~~~~ 114 (428)
-.+.++++++++++++ + +.-+||.|.|+ ++ ...+|.+.+||++++.-..
T Consensus 131 ~~p~IKE~vR~~I~~A--~-kVIAIVMD~FTD~dIf~DLleAa~kR~VpVYiLLD~~ 184 (284)
T PF07894_consen 131 GQPHIKEVVRRMIQQA--Q-KVIAIVMDVFTDVDIFCDLLEAANKRGVPVYILLDEQ 184 (284)
T ss_pred CCCCHHHHHHHHHHHh--c-ceeEEEeeccccHHHHHHHHHHHHhcCCcEEEEechh
Confidence 3456888888888765 4 89999999986 22 3567889999998886553
No 266
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=33.57 E-value=1.3e+02 Score=26.77 Aligned_cols=23 Identities=22% Similarity=0.176 Sum_probs=19.0
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNS 24 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~ 24 (428)
.++|..++++|++|.++..+..+
T Consensus 18 ~~la~~~a~~g~~vLlvd~D~~~ 40 (254)
T cd00550 18 AATAVRLAEQGKKVLLVSTDPAH 40 (254)
T ss_pred HHHHHHHHHCCCCceEEeCCCcc
Confidence 36899999999999999887543
No 267
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=33.31 E-value=1.2e+02 Score=25.46 Aligned_cols=29 Identities=21% Similarity=0.201 Sum_probs=23.1
Q ss_pred CceEEEE-cCc-hhhHHHHHHHcCCceEEEe
Q 014232 83 EIVCIIY-DEL-MYFAESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI~-D~~-~~~~~~~A~~lgiP~v~~~ 111 (428)
++|.|++ +.- .+.+..+|.++|+|++..-
T Consensus 53 ~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~vR 83 (179)
T COG0503 53 GIDKIVTIEARGIPLAAAVALELGVPFVPVR 83 (179)
T ss_pred CCCEEEEEccccchhHHHHHHHhCCCEEEEE
Confidence 6899993 332 3778999999999999875
No 268
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=33.29 E-value=3.2e+02 Score=25.21 Aligned_cols=29 Identities=10% Similarity=0.000 Sum_probs=22.9
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 113 (428)
+.|++|+.. .....+|..+|+|+|.++..
T Consensus 251 ~a~l~I~~D--SGp~HlAaA~~~P~i~lfG~ 279 (334)
T TIGR02195 251 LAKAVVTND--SGLMHVAAALNRPLVALYGS 279 (334)
T ss_pred hCCEEEeeC--CHHHHHHHHcCCCEEEEECC
Confidence 579999553 35788999999999987654
No 269
>TIGR01498 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. This model describes the folate biosynthesis enzyme 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. Alternate names include 6-hydroxymethyl-7,8-dihydropterin diphosphokinase and 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (HPPK). The extreme C-terminal region, of typically eight to thirty residues, is not included in the model. This enzyme may be found as a fusion protein with other enzymes of folate biosynthesis.
Probab=33.19 E-value=48 Score=25.92 Aligned_cols=27 Identities=26% Similarity=0.276 Sum_probs=20.0
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCC
Q 014232 244 LYVSLGSIVSMDKKELKEMAWGLYNSK 270 (428)
Q Consensus 244 v~vsfGS~~~~~~~~~~~~~~al~~~~ 270 (428)
||+|+||......+.++..+..|++.+
T Consensus 1 ~~i~lGSN~g~~~~~l~~A~~~L~~~~ 27 (127)
T TIGR01498 1 AYIALGSNLGDRLKNLRAALAALAALP 27 (127)
T ss_pred CEEEEeCCcHhHHHHHHHHHHHHhcCC
Confidence 589999998755566777777776654
No 270
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=33.15 E-value=2.4e+02 Score=23.08 Aligned_cols=33 Identities=12% Similarity=0.246 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 391 QEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 391 ~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
+.+-+|.+.+++.++ +|..-..-.++|-+.++|
T Consensus 123 pd~~~Ri~~~~~~i~----~G~pv~~~~~e~~~iv~R 155 (158)
T TIGR02898 123 PDTVERIRRYGKGIK----EGRPVEGFLDELAEIVRR 155 (158)
T ss_pred HHHHHHHHHHHHHhH----cCCChHHHHHHHHHHHHh
Confidence 889999999999998 666666677777776665
No 271
>PF01372 Melittin: Melittin; InterPro: IPR002116 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an Arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 3. Melittin is the principal protein component of the venom of the honeybee, Apis mellifera. It inhibits protein kinase C, Ca2+/calmodulin-dependent protein kinase II, myosin light chain kinase and Na+/K+-ATPase (synaptosomal membrane) and is a cell membrane lytic factor. Melittin is a small peptide with no disulphide bridge; the N-terminal part of the molecule is predominantly hydrophobic and the C-terminal part is hydrophilic and strongly basic. The molecular mechanisms underlying the various effects of melittin on membranes have not been completely defined and much of the evidence indicates that different molecular mechanisms may underlie different actions of the peptide []. Extensive work with melittin has shown that the venom has multiple effects, probably, as a result of its interaction with negatively changed phospholipids. It inhibits well known transport pumps such as the Na+-K+-ATPase and the H+-K+-ATPase. Melittin increases the permeability of cell membranes to ions, particularly Na+ and indirectly Ca2+, because of the Na+-Ca2+-exchange. This effect results in marked morphological and functional changes, particularly in excitable tissues such as cardiac myocytes. In some other tissues, e.g., cornea, not only Na+ but Cl- permeability is also increased by melittin. Similar effects to melittin on H+-K+-ATPase have been found with the synthetic amphipathic polypeptide Trp-3 []. The study of melittin in model membranes has been useful for the development of methodology for determination of membrane protein structures. A molecular dynamics simulation of melittin in a hydrated dipalmitoylphosphatidylcholine (DPPC) bilayer was carried out. The effect of melittin on the surrounding membrane was localised to its immediate vicinity, and its asymmetry with respect to the two layers may be a result of the fact that it is not fully transmembranal. Melittin's hydrophilic C terminus anchors it at the extracellular interface, leaving the N terminus "loose" in the lower layer of the membrane [].; GO: 0004860 protein kinase inhibitor activity, 0005576 extracellular region; PDB: 3QRX_B 2MLT_A 1BH1_A.
Probab=32.74 E-value=6.5 Score=20.39 Aligned_cols=17 Identities=24% Similarity=0.593 Sum_probs=13.6
Q ss_pred ccchhHHhhhcCCceec
Q 014232 328 GWNSTLESICEGVPMIC 344 (428)
Q Consensus 328 G~~s~~eal~~GvP~v~ 344 (428)
|.|+++-.|..|.|.++
T Consensus 1 gIGa~Lkvla~~LP~lI 17 (26)
T PF01372_consen 1 GIGAILKVLATGLPTLI 17 (26)
T ss_dssp -HHHHHHHHHTHHHHHH
T ss_pred ChhHHHHHHHhcChHHH
Confidence 67888889999988775
No 272
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=32.46 E-value=40 Score=27.41 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=18.2
Q ss_pred HHHHHHHHhCCCeEEEEeCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDF 22 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~ 22 (428)
.++|..|+++||+|++.+.+.
T Consensus 12 ~AlA~~la~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 12 TALAALLADNGHEVTLWGRDE 32 (157)
T ss_dssp HHHHHHHHHCTEEEEEETSCH
T ss_pred HHHHHHHHHcCCEEEEEeccH
Confidence 378999999999999998773
No 273
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=32.37 E-value=84 Score=28.60 Aligned_cols=20 Identities=25% Similarity=0.197 Sum_probs=18.1
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
+.|++.|+++|++|..+..+
T Consensus 14 ~~~~~~l~~~g~~v~~~g~~ 33 (287)
T TIGR02853 14 LELIRKLEELDAKISLIGFD 33 (287)
T ss_pred HHHHHHHHHCCCEEEEEecc
Confidence 57899999999999999876
No 274
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.02 E-value=77 Score=28.93 Aligned_cols=58 Identities=17% Similarity=0.268 Sum_probs=40.8
Q ss_pred HhhhccCCcCceeeccccchhHHhhhc----CCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 312 KDVLSHIAVGGFWSHCGWNSTLESICE----GVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 312 ~~iL~~~~~~~~itHgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
.++...+++ +|+=||=||++.+.+. ++|++++-.. .+|.. ...+.+++.+++.+++.+
T Consensus 59 ~~~~~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL--t~~~~~~~~~~l~~i~~g 120 (292)
T PRK01911 59 EELDGSADM--VISIGGDGTFLRTATYVGNSNIPILGINTG--------------RLGFL--ATVSKEEIEETIDELLNG 120 (292)
T ss_pred hhcccCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecC--------------CCCcc--cccCHHHHHHHHHHHHcC
Confidence 344445677 9999999999999773 7888877221 12211 246778888999988876
No 275
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional
Probab=31.93 E-value=3.5e+02 Score=23.83 Aligned_cols=46 Identities=15% Similarity=0.088 Sum_probs=32.9
Q ss_pred hhHHHHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecccH
Q 014232 65 APFHKCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTNSA 115 (428)
Q Consensus 65 ~~l~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~ 115 (428)
..+.+.++.+.+.+ =.--++.|+ ..-...+|.++|.++|=+++.++
T Consensus 113 ~~l~~~i~~L~~~g----IrVSLFidP-~~~qi~~A~~~GAd~VELhTG~y 158 (239)
T PRK05265 113 DKLKPAIARLKDAG----IRVSLFIDP-DPEQIEAAAEVGADRIELHTGPY 158 (239)
T ss_pred HHHHHHHHHHHHCC----CEEEEEeCC-CHHHHHHHHHhCcCEEEEechhh
Confidence 34667777776653 123445586 56678899999999999998864
No 276
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=31.81 E-value=1.9e+02 Score=29.55 Aligned_cols=27 Identities=19% Similarity=0.241 Sum_probs=22.4
Q ss_pred cCceeecccc------chhHHhhhcCCceeccc
Q 014232 320 VGGFWSHCGW------NSTLESICEGVPMICRP 346 (428)
Q Consensus 320 ~~~~itHgG~------~s~~eal~~GvP~v~~P 346 (428)
.+++++|.|- +++++|...++|+|++-
T Consensus 64 ~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 64 VGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 4459999884 48899999999999983
No 277
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=31.81 E-value=33 Score=28.15 Aligned_cols=27 Identities=19% Similarity=0.289 Sum_probs=22.1
Q ss_pred cCceeeccccc------hhHHhhhcCCceeccc
Q 014232 320 VGGFWSHCGWN------STLESICEGVPMICRP 346 (428)
Q Consensus 320 ~~~~itHgG~~------s~~eal~~GvP~v~~P 346 (428)
.+.+++|+|-| +++||...++|||++.
T Consensus 61 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 61 PVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred CEEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 34488998854 7889999999999994
No 278
>PHA02754 hypothetical protein; Provisional
Probab=31.51 E-value=89 Score=20.29 Aligned_cols=23 Identities=13% Similarity=0.411 Sum_probs=17.6
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHH
Q 014232 381 VKQLMVEKEGQEMRQRAKNLKEDVEL 406 (428)
Q Consensus 381 i~~vl~~~~~~~~~~~a~~l~~~~~~ 406 (428)
+.+++.+ .++++..+++++.+.+
T Consensus 7 i~k~i~e---K~Fke~MRelkD~LSe 29 (67)
T PHA02754 7 IPKAIME---KDFKEAMRELKDILSE 29 (67)
T ss_pred HHHHHHH---hHHHHHHHHHHHHHhh
Confidence 4455566 6899999999999873
No 279
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=31.45 E-value=2e+02 Score=25.82 Aligned_cols=23 Identities=13% Similarity=0.033 Sum_probs=14.2
Q ss_pred HHHHHHHHHHhCCCCeEEEEcCC
Q 014232 258 ELKEMAWGLYNSKQPFLWVLRPS 280 (428)
Q Consensus 258 ~~~~~~~al~~~~~~~iw~~~~~ 280 (428)
..+..++++.+.|..=|++-+..
T Consensus 38 evnAaiega~~aGa~eIvV~DsH 60 (263)
T cd08770 38 EVVAACEGAIEAGATEIVVKDAH 60 (263)
T ss_pred HHHHHHHHHHHcCCcEEEEEcCC
Confidence 34556666666676667766654
No 280
>COG1422 Predicted membrane protein [Function unknown]
Probab=31.25 E-value=1.1e+02 Score=26.02 Aligned_cols=71 Identities=11% Similarity=0.196 Sum_probs=43.4
Q ss_pred chhHHhhhcCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHH
Q 014232 330 NSTLESICEGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKE-GQEMRQRAKNLKEDVELCI 408 (428)
Q Consensus 330 ~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~~~~ 408 (428)
+|+.++++-++=.+..|+..=++..--.++- ++ .-.-...-+++++.|.+ -+++++.++++++.+++|-
T Consensus 23 ~~~~~~i~~~ln~~f~P~i~~~~p~lvilV~--av--------i~gl~~~i~~~~liD~ekm~~~qk~m~efq~e~~eA~ 92 (201)
T COG1422 23 SSIRDGIGGALNVVFGPLLSPLPPHLVILVA--AV--------ITGLYITILQKLLIDQEKMKELQKMMKEFQKEFREAQ 92 (201)
T ss_pred HHHHHHHHHHHHHHHhhhccccccHHHHHHH--HH--------HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3666777777766666765544444332221 11 11123345566666754 6789999999999999885
Q ss_pred hc
Q 014232 409 KE 410 (428)
Q Consensus 409 ~~ 410 (428)
++
T Consensus 93 ~~ 94 (201)
T COG1422 93 ES 94 (201)
T ss_pred Hh
Confidence 43
No 281
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated
Probab=31.06 E-value=1.2e+02 Score=29.75 Aligned_cols=32 Identities=9% Similarity=0.005 Sum_probs=24.4
Q ss_pred CceEEEEcCc------------hhhHHHHHHHcCCceEEEeccc
Q 014232 83 EIVCIIYDEL------------MYFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 83 ~~D~vI~D~~------------~~~~~~~A~~lgiP~v~~~~~~ 114 (428)
++|++|++.. .....++|+.++.|++.+....
T Consensus 81 ~~D~vlVEGagGl~~g~~~~~~~~s~adiA~~l~~pviLV~~~~ 124 (451)
T PRK01077 81 GADIAVIEGVMGLFDGAGSDPDEGSTADIAKLLGAPVVLVVDAS 124 (451)
T ss_pred cCCEEEEECCCccccCCccCCCCCCHHHHHHHhCCCEEEEECCc
Confidence 6899997554 1236789999999999987654
No 282
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=30.59 E-value=1.3e+02 Score=25.45 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=26.9
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 113 (428)
...+||+|--...+...|++.|||+..+..-
T Consensus 29 ~i~~Visd~~~A~~lerA~~~gIpt~~~~~k 59 (200)
T COG0299 29 EIVAVISDKADAYALERAAKAGIPTVVLDRK 59 (200)
T ss_pred EEEEEEeCCCCCHHHHHHHHcCCCEEEeccc
Confidence 5789999997888999999999999887654
No 283
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase. This model describes cobyrinic acid a,c-diamide synthase, the cobB (cbiA in Salmonella) protein of cobalamin biosynthesis. It is responsible for the amidation of carboxylic groups at positions A and C of either cobyrinic acid or hydrogenobrynic acid. NH(2) groups are provided by glutamine and one molecule of ATP hydrogenolyzed for each amidation.
Probab=30.46 E-value=2.4e+02 Score=27.65 Aligned_cols=33 Identities=12% Similarity=0.030 Sum_probs=25.7
Q ss_pred CceEEEEcCch------------hhHHHHHHHcCCceEEEecccH
Q 014232 83 EIVCIIYDELM------------YFAESAANQLKLRSIILRTNSA 115 (428)
Q Consensus 83 ~~D~vI~D~~~------------~~~~~~A~~lgiP~v~~~~~~~ 115 (428)
+.|++|++... ....++|+.++.|++.+.....
T Consensus 77 ~~D~viVEGagGl~~g~~p~~~~~s~adlAk~l~~pVILV~~~~~ 121 (449)
T TIGR00379 77 GTDYSIIEGVRGLYDGISAITDYGSTASVAKALDAPIVLVMNCQR 121 (449)
T ss_pred cCCEEEEecCCccccCCCCCCCCccHHHHHHHhCCCEEEEECCch
Confidence 68999977651 1367999999999999886653
No 284
>COG4081 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.42 E-value=44 Score=25.92 Aligned_cols=20 Identities=40% Similarity=0.599 Sum_probs=17.5
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
+-++..|.++|++||+..++
T Consensus 22 iYls~klkkkgf~v~Vaate 41 (148)
T COG4081 22 IYLSHKLKKKGFDVTVAATE 41 (148)
T ss_pred HHHHHHhhccCccEEEecCH
Confidence 45788999999999999888
No 285
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=30.35 E-value=78 Score=29.46 Aligned_cols=30 Identities=7% Similarity=0.058 Sum_probs=21.6
Q ss_pred CceEEEEcCchh-------hH---HHHHHHcCCceEEEec
Q 014232 83 EIVCIIYDELMY-------FA---ESAANQLKLRSIILRT 112 (428)
Q Consensus 83 ~~D~vI~D~~~~-------~~---~~~A~~lgiP~v~~~~ 112 (428)
+||++|+-+.+- |+ ..+.++++||.+.-..
T Consensus 80 ~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vtaM~ 119 (349)
T PF07355_consen 80 KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTAMY 119 (349)
T ss_pred CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEEec
Confidence 899999998752 22 1256689999987543
No 286
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=30.34 E-value=68 Score=28.35 Aligned_cols=31 Identities=23% Similarity=0.100 Sum_probs=23.7
Q ss_pred CceEEE-EcCch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCII-YDELM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
.||+|| +|+.. .-+..=|.++|||+|.+.-+
T Consensus 118 ~P~llIV~Dp~~d~qAI~EA~~lnIPvIal~DT 150 (249)
T PTZ00254 118 EPRLLIVTDPRTDHQAIREASYVNIPVIALCDT 150 (249)
T ss_pred CCCEEEEeCCCcchHHHHHHHHhCCCEEEEecC
Confidence 477766 78765 45667789999999999855
No 287
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=30.28 E-value=3.5e+02 Score=23.13 Aligned_cols=143 Identities=12% Similarity=0.111 Sum_probs=71.2
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhh-CCCceEEeecChHhhhccCC
Q 014232 241 NSVLYVSLGSIVSMDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAV-GENGCVVKWAPQKDVLSHIA 319 (428)
Q Consensus 241 ~~vv~vsfGS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~v~~~~pq~~iL~~~~ 319 (428)
+.+++|+-|.++ ..-++.|.+.+.++.++ ... +-+.+.+-. ..++....--.+...|..+.
T Consensus 10 k~vlVvGgG~va-------~rk~~~Ll~~ga~VtVv-sp~----------~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~ 71 (205)
T TIGR01470 10 RAVLVVGGGDVA-------LRKARLLLKAGAQLRVI-AEE----------LESELTLLAEQGGITWLARCFDADILEGAF 71 (205)
T ss_pred CeEEEECcCHHH-------HHHHHHHHHCCCEEEEE-cCC----------CCHHHHHHHHcCCEEEEeCCCCHHHhCCcE
Confidence 568888888775 23345556677776544 222 112222111 12334332122344567777
Q ss_pred cCceeeccccchhHH-----hhhcCCce--eccccccchhhhHHHHhhhheeEEEcC--C--ccCHHHHHHHHHHHhcCc
Q 014232 320 VGGFWSHCGWNSTLE-----SICEGVPM--ICRPGFGDQRVSARYVSHVWRIGLQLE--N--DLEKGEVEKAVKQLMVEK 388 (428)
Q Consensus 320 ~~~~itHgG~~s~~e-----al~~GvP~--v~~P~~~DQ~~na~~v~~~~g~g~~l~--~--~~~~~~l~~ai~~vl~~~ 388 (428)
+ +|..-|...+.+ |-..|+|+ +--|-.+| +..-..+.+. ++-+.+. + -.-+..|++.|.+++..+
T Consensus 72 l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~~~g-~l~iaisT~G~sP~la~~lr~~ie~~l~~~ 147 (205)
T TIGR01470 72 L--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIVDRS-PVVVAISSGGAAPVLARLLRERIETLLPPS 147 (205)
T ss_pred E--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEEEcC-CEEEEEECCCCCcHHHHHHHHHHHHhcchh
Confidence 7 888877764444 34568888 33343333 1122223221 2333333 2 233456777777776432
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 014232 389 EGQEMRQRAKNLKEDVEL 406 (428)
Q Consensus 389 ~~~~~~~~a~~l~~~~~~ 406 (428)
- ..+-+...++++.+++
T Consensus 148 ~-~~~~~~~~~~R~~~k~ 164 (205)
T TIGR01470 148 L-GDLATLAATWRDAVKK 164 (205)
T ss_pred H-HHHHHHHHHHHHHHHh
Confidence 1 3455556666666553
No 288
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=30.13 E-value=1.6e+02 Score=29.81 Aligned_cols=90 Identities=8% Similarity=0.056 Sum_probs=47.7
Q ss_pred ecccccCCH-HHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHh---------hhcc
Q 014232 248 LGSIVSMDK-KELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKD---------VLSH 317 (428)
Q Consensus 248 fGS~~~~~~-~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~---------iL~~ 317 (428)
-||..+... ...+.+++.|++.|.+.+.-+.+... ..+-+.+.+ .+++.++. +.|+. -..+
T Consensus 4 ~~~~~~~~~~~~~~~l~~~L~~~GV~~vFgvpG~~~------~~l~dal~~--~~~i~~i~-~~hE~~A~~~Adgyar~t 74 (564)
T PRK08155 4 SGTTSTRKRFTGAELIVRLLERQGIRIVTGIPGGAI------LPLYDALSQ--STQIRHIL-ARHEQGAGFIAQGMARTT 74 (564)
T ss_pred CCCCccCCcccHHHHHHHHHHHcCCCEEEeCCCccc------HHHHHHHhc--cCCceEEE-eccHHHHHHHHHHHHHHc
Confidence 344444332 33566888888888887766544311 001111210 11222221 11211 1122
Q ss_pred CCcCceeeccccc------hhHHhhhcCCceeccc
Q 014232 318 IAVGGFWSHCGWN------STLESICEGVPMICRP 346 (428)
Q Consensus 318 ~~~~~~itHgG~~------s~~eal~~GvP~v~~P 346 (428)
...+++++|.|-| +++||-..++|+|++-
T Consensus 75 g~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 75 GKPAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CCCeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 2334488888854 7999999999999984
No 289
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=29.99 E-value=83 Score=28.75 Aligned_cols=57 Identities=11% Similarity=0.125 Sum_probs=39.7
Q ss_pred HhhhccCCcCceeeccccchhHHhhh----cCCceeccccccchhhhHHHHhhhhe-eEEEcCCccCHHHHHHHHHHHhc
Q 014232 312 KDVLSHIAVGGFWSHCGWNSTLESIC----EGVPMICRPGFGDQRVSARYVSHVWR-IGLQLENDLEKGEVEKAVKQLMV 386 (428)
Q Consensus 312 ~~iL~~~~~~~~itHgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~v~~~~g-~g~~l~~~~~~~~l~~ai~~vl~ 386 (428)
.++...+++ +|+=||=||++.+.. .++|++.+-. | +|.. ..++.+++.+++++++.
T Consensus 58 ~~~~~~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~---------------G~lGFl--~~~~~~~~~~~l~~i~~ 118 (292)
T PRK03378 58 AEIGQQADL--AIVVGGDGNMLGAARVLARYDIKVIGINR---------------GNLGFL--TDLDPDNALQQLSDVLE 118 (292)
T ss_pred hhcCCCCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEEC---------------CCCCcc--cccCHHHHHHHHHHHHc
Confidence 334445677 999999999999975 3678877622 2 1221 24667888899998887
Q ss_pred C
Q 014232 387 E 387 (428)
Q Consensus 387 ~ 387 (428)
+
T Consensus 119 g 119 (292)
T PRK03378 119 G 119 (292)
T ss_pred C
Confidence 6
No 290
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=29.93 E-value=1.2e+02 Score=25.10 Aligned_cols=31 Identities=19% Similarity=-0.003 Sum_probs=23.9
Q ss_pred CceEEEEcCchhh--HHHHHHHc------CCceEEEecc
Q 014232 83 EIVCIIYDELMYF--AESAANQL------KLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~~~--~~~~A~~l------giP~v~~~~~ 113 (428)
+||+||+..-..| ...+|..+ |.+.|.+=+.
T Consensus 92 rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~ 130 (170)
T PF08660_consen 92 RPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESF 130 (170)
T ss_pred CCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEee
Confidence 7999998886644 45677878 8999887655
No 291
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=29.72 E-value=4e+02 Score=23.67 Aligned_cols=56 Identities=11% Similarity=0.074 Sum_probs=31.9
Q ss_pred ChHhhhccCCcCceeec----cccchhHHhhhcCCceeccccccchh--hhHHHHhhhheeEEEcC
Q 014232 310 PQKDVLSHIAVGGFWSH----CGWNSTLESICEGVPMICRPGFGDQR--VSARYVSHVWRIGLQLE 369 (428)
Q Consensus 310 pq~~iL~~~~~~~~itH----gG~~s~~eal~~GvP~v~~P~~~DQ~--~na~~v~~~~g~g~~l~ 369 (428)
...+++..+++ +|.= ...--+..|+.+|+|+++-|...++. .-...+ . .++++.+.
T Consensus 53 dl~~ll~~~Dv--Vid~t~p~~~~~~~~~al~~G~~vvigttG~s~~~~~~l~~a-a-~~~~v~~s 114 (257)
T PRK00048 53 DLEAVLADADV--LIDFTTPEATLENLEFALEHGKPLVIGTTGFTEEQLAELEEA-A-KKIPVVIA 114 (257)
T ss_pred CHHHhccCCCE--EEECCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH-h-cCCCEEEE
Confidence 34455656666 5522 22345566899999999988654433 222333 2 36666554
No 292
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=29.69 E-value=4e+02 Score=24.92 Aligned_cols=29 Identities=14% Similarity=-0.055 Sum_probs=23.3
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 113 (428)
+.|++|+.. .....+|..+|+|+|.++..
T Consensus 262 ~a~l~v~nD--SGp~HlAaA~g~P~v~lfGp 290 (352)
T PRK10422 262 HAQLFIGVD--SAPAHIAAAVNTPLICLFGA 290 (352)
T ss_pred hCCEEEecC--CHHHHHHHHcCCCEEEEECC
Confidence 579999653 45788999999999998754
No 293
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=29.63 E-value=1.8e+02 Score=27.62 Aligned_cols=97 Identities=19% Similarity=0.173 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHhCCCCeEEEEcCCCCCCC--cccc--CC-chhHHHhhCCC--ceEEeecChHh---hhccCCcCcee
Q 014232 255 DKKELKEMAWGLYNSKQPFLWVLRPSSTSAS--SGIE--LL-PEGFEEAVGEN--GCVVKWAPQKD---VLSHIAVGGFW 324 (428)
Q Consensus 255 ~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~--~~~~--~~-p~~~~~~~~~~--~~v~~~~pq~~---iL~~~~~~~~i 324 (428)
+...+..++++++..+.++...+..+..... ...+ .+ +.+. ...++ +.+.+++||.+ +|-.|++ =+
T Consensus 193 e~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~~--~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--Nf 268 (374)
T PF10093_consen 193 ENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGDS--WQRGNLTLHVLPFVPQDDYDRLLWACDF--NF 268 (374)
T ss_pred CchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCccc--cccCCeEEEECCCCCHHHHHHHHHhCcc--ce
Confidence 4455677777777776666554433211000 0000 00 0000 01133 33569999985 8888887 33
Q ss_pred eccccchhHHhhhcCCceeccccccchhhhHHHH
Q 014232 325 SHCGWNSTLESICEGVPMICRPGFGDQRVSARYV 358 (428)
Q Consensus 325 tHgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v 358 (428)
-- |=-|..-|..+|+|+|== ..=|.++|...
T Consensus 269 VR-GEDSfVRAqwAgkPFvWh--IYpQ~d~aHl~ 299 (374)
T PF10093_consen 269 VR-GEDSFVRAQWAGKPFVWH--IYPQEDDAHLD 299 (374)
T ss_pred Ee-cchHHHHHHHhCCCceEe--cCcCchhhHHH
Confidence 33 677999999999999842 33455665444
No 294
>TIGR00355 purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase. Involved in purine ribonucleotide biosynthesis. The IMP cyclohydrolase activity is in the N-terminal region.
Probab=29.44 E-value=58 Score=32.02 Aligned_cols=83 Identities=7% Similarity=0.055 Sum_probs=46.4
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCC--CCCCCC---CCcCCHHHHHHHHHHhhchhHHHHHHHHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPE--GLADDD---IYSGNIIAIIMHLNANCGAPFHKCLVQMM 75 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 75 (428)
++.||+.|.+.|+++. +|......+.+. |+.+..+.+ +.|+-. ..+..+ +...-+... ...++ ++++.
T Consensus 13 iv~lAk~L~~lGfeIi--ATgGTak~L~e~-GI~v~~Vsk~TgfPEil~GRVKTLHP-~IhgGiLar--r~~~~-~~~l~ 85 (511)
T TIGR00355 13 IVEFAQGLVERGVELL--STGGTAKLLAEA-GVPVTEVSDYTGFPEMMDGRVKTLHP-KVHGGILAR--RGDDD-DADLE 85 (511)
T ss_pred HHHHHHHHHHCCCEEE--EechHHHHHHHC-CCeEEEeecccCCchhhCCccccCCc-hhhhhhhcC--CCchH-HHHHH
Confidence 3689999999999974 455444444443 888887763 455432 222222 222222221 22233 55554
Q ss_pred HccCCCCCceEEEEcCc
Q 014232 76 KQQMPADEIVCIIYDEL 92 (428)
Q Consensus 76 ~~~~~~~~~D~vI~D~~ 92 (428)
+.. -. +.|+||++.+
T Consensus 86 ~~~-I~-~IDlVvvNLY 100 (511)
T TIGR00355 86 EHG-IE-PIDLVVVNLY 100 (511)
T ss_pred HcC-CC-ceeEEEEecc
Confidence 432 23 6899999864
No 295
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=29.37 E-value=91 Score=31.53 Aligned_cols=94 Identities=19% Similarity=0.198 Sum_probs=49.9
Q ss_pred cChHhhhccCCcCceeecc-ccc-hhHHhhhcCCceecccccc-chhhhH---HHHhhhheeEEEcCCccCHHHHHHHHH
Q 014232 309 APQKDVLSHIAVGGFWSHC-GWN-STLESICEGVPMICRPGFG-DQRVSA---RYVSHVWRIGLQLENDLEKGEVEKAVK 382 (428)
Q Consensus 309 ~pq~~iL~~~~~~~~itHg-G~~-s~~eal~~GvP~v~~P~~~-DQ~~na---~~v~~~~g~g~~l~~~~~~~~l~~ai~ 382 (428)
+++.+++.-++++.|-+-= =|| |-+||+.+|||.|..=+.| -++.+- ... . .|+-+.-.+..+.++..+.+.
T Consensus 461 l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~-~-~GV~VvdR~~~n~~e~v~~la 538 (633)
T PF05693_consen 461 LDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPE-E-YGVYVVDRRDKNYDESVNQLA 538 (633)
T ss_dssp S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHG-G-GTEEEE-SSSS-HHHHHHHHH
T ss_pred CCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCc-C-CcEEEEeCCCCCHHHHHHHHH
Confidence 4677777777775555521 144 8899999999999976643 222221 111 2 355554444555555555555
Q ss_pred HHhc-----Cch-hHHHHHHHHHHHHHH
Q 014232 383 QLMV-----EKE-GQEMRQRAKNLKEDV 404 (428)
Q Consensus 383 ~vl~-----~~~-~~~~~~~a~~l~~~~ 404 (428)
+.|. +.+ ....|.+|++|++.+
T Consensus 539 ~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 539 DFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 5542 222 456777777777654
No 296
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=29.34 E-value=2.5e+02 Score=26.04 Aligned_cols=22 Identities=23% Similarity=0.185 Sum_probs=17.8
Q ss_pred HHHHHHHhCCCeEEEEeCCCCC
Q 014232 3 QLGTILYSKGFSITVVHTDFNS 24 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~~~~ 24 (428)
++|-.|++.|..|.+++++..+
T Consensus 21 A~A~~lA~~g~kvLlvStDPAh 42 (322)
T COG0003 21 ATAVKLAESGKKVLLVSTDPAH 42 (322)
T ss_pred HHHHHHHHcCCcEEEEEeCCCC
Confidence 5678899999888888877555
No 297
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=29.13 E-value=2.3e+02 Score=26.57 Aligned_cols=34 Identities=9% Similarity=-0.033 Sum_probs=20.6
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIP 39 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~ 39 (428)
..|+++|.++ |+|++++..... .. ..+++.+.++
T Consensus 23 ~~l~~~l~~~-~~v~v~~~~~~~--~~-~~~~~~~~~~ 56 (388)
T TIGR02149 23 EELTRELARL-MDVDVRCFGDQR--FD-SEGLTVKGYR 56 (388)
T ss_pred HHHHHHHHHh-cCeeEEcCCCch--hc-CCCeEEEEec
Confidence 4689999887 777766654322 11 2366666554
No 298
>TIGR00313 cobQ cobyric acid synthase CobQ.
Probab=29.00 E-value=5.8e+02 Score=25.25 Aligned_cols=31 Identities=10% Similarity=0.031 Sum_probs=24.1
Q ss_pred CceEEEEcCch-----------hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELM-----------YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~-----------~~~~~~A~~lgiP~v~~~~~ 113 (428)
++|+||+|... .....+|+.++.|++.+.-.
T Consensus 122 ~~D~vIIEGaGGl~~~~~~~~d~s~~~lA~~l~apVILV~d~ 163 (475)
T TIGR00313 122 EYDYVVIEGAGSPAEINLLKRDLANMRIAELANADAILVADI 163 (475)
T ss_pred cCCEEEEECCCCccccccCcCCchHHHHHHHhCCCEEEEEeC
Confidence 68999999854 12368899999999998644
No 299
>PLN02891 IMP cyclohydrolase
Probab=28.92 E-value=51 Score=32.50 Aligned_cols=83 Identities=13% Similarity=0.077 Sum_probs=46.0
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCC--CCCCCC---CCcCCHHHHHHHHHHhhchhHHHHHHHHHH
Q 014232 2 LQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPE--GLADDD---IYSGNIIAIIMHLNANCGAPFHKCLVQMMK 76 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 76 (428)
..||+.|.+.|.++ ++|.-....+.+. ||....+.+ ++|+-. ..+.++ +.+.-+.. .....+-++++.+
T Consensus 36 ~~fAk~L~~~gveI--iSTgGTak~L~e~-Gi~v~~Vsd~TgfPEiL~GRVKTLHP-kIhgGILa--~r~~~~h~~~l~~ 109 (547)
T PLN02891 36 ALLANGLQELGYTI--VSTGGTASALEAA-GVSVTKVEELTNFPEMLDGRVKTLHP-AVHGGILA--RRDQEHHMEALNE 109 (547)
T ss_pred HHHHHHHHHCCCEE--EEcchHHHHHHHc-CCceeeHHhccCCchhhCCcccccCc-hhhhhhhc--CCCCHHHHHHHHH
Confidence 57999999998885 4555445555543 899888874 555532 222222 22222211 1112234444444
Q ss_pred ccCCCCCceEEEEcCc
Q 014232 77 QQMPADEIVCIIYDEL 92 (428)
Q Consensus 77 ~~~~~~~~D~vI~D~~ 92 (428)
.. -. +.|+||++.+
T Consensus 110 ~~-I~-~IDlVvVNLY 123 (547)
T PLN02891 110 HG-IG-TIDVVVVNLY 123 (547)
T ss_pred cC-CC-ceeeEEEecc
Confidence 32 23 6899999864
No 300
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=28.65 E-value=2.2e+02 Score=21.87 Aligned_cols=36 Identities=17% Similarity=0.061 Sum_probs=24.9
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHhC--CCCeEEE
Q 014232 241 NSVLYVSLGSIVSMDKKELKEMAWGLYNS--KQPFLWV 276 (428)
Q Consensus 241 ~~vv~vsfGS~~~~~~~~~~~~~~al~~~--~~~~iw~ 276 (428)
..+|+++.||......+.+..+...+++. ...+-+.
T Consensus 2 ~~lvlv~hGS~~~~~~~~~~~~~~~l~~~~~~~~v~~a 39 (126)
T PRK00923 2 LGLLLVGHGSRLPYNKEVVTKIAEKIKEKHPFYIVEVG 39 (126)
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 35899999997654556778888888763 2345444
No 301
>PRK11253 ldcA L,D-carboxypeptidase A; Provisional
Probab=28.58 E-value=1.3e+02 Score=27.66 Aligned_cols=28 Identities=11% Similarity=0.148 Sum_probs=21.3
Q ss_pred ccCCHHHHHHHHHHH--HhCCCCeEEEEcCC
Q 014232 252 VSMDKKELKEMAWGL--YNSKQPFLWVLRPS 280 (428)
Q Consensus 252 ~~~~~~~~~~~~~al--~~~~~~~iw~~~~~ 280 (428)
+..+.+..+.+.+++ ... .+.||..+++
T Consensus 47 agtd~~Ra~dL~~a~a~~dp-i~aI~~~rGG 76 (305)
T PRK11253 47 AGTDGERLADLNSLADLTTP-NTIVLAVRGG 76 (305)
T ss_pred CCCHHHHHHHHHHHHhcCCC-ccEEEEeccc
Confidence 334666678898888 666 9999998875
No 302
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=28.49 E-value=4.4e+02 Score=26.86 Aligned_cols=28 Identities=11% Similarity=0.132 Sum_probs=23.0
Q ss_pred CcCceeeccccc------hhHHhhhcCCceeccc
Q 014232 319 AVGGFWSHCGWN------STLESICEGVPMICRP 346 (428)
Q Consensus 319 ~~~~~itHgG~~------s~~eal~~GvP~v~~P 346 (428)
+.+++++|.|-| ++++|...++|+|++-
T Consensus 68 ~~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 68 RMGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 345599998854 7889999999999985
No 303
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=28.46 E-value=59 Score=27.64 Aligned_cols=21 Identities=14% Similarity=0.059 Sum_probs=18.4
Q ss_pred HHHHHHHHhCCCeEEEEeCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDF 22 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~ 22 (428)
..|+++|.++||+|.++.|+.
T Consensus 23 ~~lir~L~k~G~~V~vv~T~a 43 (196)
T PRK08305 23 MPEIEKLVDEGAEVTPIVSYT 43 (196)
T ss_pred HHHHHHHHhCcCEEEEEECHh
Confidence 468999999999999998884
No 304
>PRK04946 hypothetical protein; Provisional
Probab=28.16 E-value=40 Score=28.20 Aligned_cols=57 Identities=14% Similarity=0.067 Sum_probs=32.4
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChH-hhhccCCcCceeeccccchhH
Q 014232 259 LKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQK-DVLSHIAVGGFWSHCGWNSTL 333 (428)
Q Consensus 259 ~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~-~iL~~~~~~~~itHgG~~s~~ 333 (428)
+..++......+.+.+-++.+.+ .++..+ .|..|+.|. .|++-+.. =-.|||.|.++
T Consensus 112 L~~fl~~a~~~g~r~v~IIHGkG-----------~gvLk~-----~V~~wL~q~~~V~af~~A--~~~~GG~GA~~ 169 (181)
T PRK04946 112 LGALIAACRKEHVFCACVMHGHG-----------KHILKQ-----QTPLWLAQHPDVMAFHQA--PKEWGGDAALL 169 (181)
T ss_pred HHHHHHHHHHcCCCEEEEEcCCC-----------HhHHHH-----HHHHHHcCCchhheeecc--CcccCCceEEE
Confidence 33344444456777777666643 233222 356888764 35544444 56799998764
No 305
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=28.03 E-value=4e+02 Score=24.75 Aligned_cols=29 Identities=14% Similarity=-0.065 Sum_probs=23.5
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 113 (428)
+.|++|+.. .....+|..+|+|+|.++..
T Consensus 260 ~a~l~Vs~D--SGp~HlAaA~g~p~v~Lfgp 288 (344)
T TIGR02201 260 HARLFIGVD--SVPMHMAAALGTPLVALFGP 288 (344)
T ss_pred hCCEEEecC--CHHHHHHHHcCCCEEEEECC
Confidence 579999653 46789999999999998754
No 306
>PRK08322 acetolactate synthase; Reviewed
Probab=27.94 E-value=2.1e+02 Score=28.80 Aligned_cols=28 Identities=21% Similarity=0.224 Sum_probs=23.0
Q ss_pred CcCceeeccccc------hhHHhhhcCCceeccc
Q 014232 319 AVGGFWSHCGWN------STLESICEGVPMICRP 346 (428)
Q Consensus 319 ~~~~~itHgG~~------s~~eal~~GvP~v~~P 346 (428)
+.+++++|.|-| ++++|...++|+|++-
T Consensus 63 ~~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 63 KAGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CCEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 345599998854 8899999999999984
No 307
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=27.89 E-value=74 Score=27.37 Aligned_cols=31 Identities=13% Similarity=-0.036 Sum_probs=21.6
Q ss_pred CceEEEEcCchhh---HHH----HHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELMYF---AES----AANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~~~---~~~----~A~~lgiP~v~~~~~ 113 (428)
.||+|++|..... .+. +.-.+++|+|.+.=.
T Consensus 93 ~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIGVAK~ 130 (208)
T cd06559 93 KPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIGVAKS 130 (208)
T ss_pred CCCEEEEeCCccccCCCcchhheeeeecCCCEEEEEcc
Confidence 6999999997533 233 344567888888755
No 308
>COG2987 HutU Urocanate hydratase [Amino acid transport and metabolism]
Probab=27.72 E-value=41 Score=32.16 Aligned_cols=40 Identities=18% Similarity=0.117 Sum_probs=28.4
Q ss_pred eEEeecChHhhhccCCc--CceeeccccchhHHhhhcCCcee
Q 014232 304 CVVKWAPQKDVLSHIAV--GGFWSHCGWNSTLESICEGVPMI 343 (428)
Q Consensus 304 ~v~~~~pq~~iL~~~~~--~~~itHgG~~s~~eal~~GvP~v 343 (428)
.+.+|-=++.+|..++- =.-+||||-=++-.+++.|.=+|
T Consensus 466 avsDwp~lnallntA~GatwvslHhGGGvgmG~s~h~G~viV 507 (561)
T COG2987 466 AVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHAGMVIV 507 (561)
T ss_pred hhhhhHHHHHHhhhccCCcEEEEecCCcccccccccCceEEE
Confidence 46799888888865442 13689999878888877665554
No 309
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=27.55 E-value=84 Score=29.15 Aligned_cols=31 Identities=13% Similarity=-0.001 Sum_probs=24.1
Q ss_pred CceEEE-EcCch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCII-YDELM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
.||+|| .|+.. ..+..=|.++|||+|.+.-+
T Consensus 152 ~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDT 184 (326)
T PRK12311 152 LPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDT 184 (326)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEeeC
Confidence 588877 67755 55667799999999998755
No 310
>PRK03094 hypothetical protein; Provisional
Probab=27.08 E-value=64 Score=22.84 Aligned_cols=20 Identities=15% Similarity=0.418 Sum_probs=15.7
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
-.+.+.|.++||+|.=+..+
T Consensus 11 s~i~~~L~~~GYeVv~l~~~ 30 (80)
T PRK03094 11 TDVQQALKQKGYEVVQLRSE 30 (80)
T ss_pred HHHHHHHHHCCCEEEecCcc
Confidence 35789999999999856443
No 311
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=26.72 E-value=68 Score=29.52 Aligned_cols=29 Identities=10% Similarity=-0.039 Sum_probs=23.0
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 113 (428)
+.|++|+-. .....+|..+|+|++.++..
T Consensus 254 ~a~l~I~~D--Sgp~HlAaa~g~P~i~lfg~ 282 (319)
T TIGR02193 254 GADAVVGVD--TGLTHLAAALDKPTVTLYGA 282 (319)
T ss_pred cCCEEEeCC--ChHHHHHHHcCCCEEEEECC
Confidence 579999653 35788999999999998753
No 312
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=26.59 E-value=95 Score=26.32 Aligned_cols=32 Identities=19% Similarity=0.071 Sum_probs=24.3
Q ss_pred CceEEE-EcCch-hhHHHHHHHcCCceEEEeccc
Q 014232 83 EIVCII-YDELM-YFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 83 ~~D~vI-~D~~~-~~~~~~A~~lgiP~v~~~~~~ 114 (428)
.||+|| .|+.. ..+..=|.++|||+|.+.-+.
T Consensus 127 ~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 127 LPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 689887 66644 456667889999999987663
No 313
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=26.30 E-value=77 Score=26.12 Aligned_cols=31 Identities=13% Similarity=0.214 Sum_probs=22.7
Q ss_pred ccCCcCceeecccc------chhHHhhhcCCceeccccc
Q 014232 316 SHIAVGGFWSHCGW------NSTLESICEGVPMICRPGF 348 (428)
Q Consensus 316 ~~~~~~~~itHgG~------~s~~eal~~GvP~v~~P~~ 348 (428)
.++.+ +++|.|- +++.+|...++|+|++--.
T Consensus 63 g~~~v--~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g~ 99 (172)
T PF02776_consen 63 GRPGV--VIVTSGPGATNALTGLANAYADRIPVLVITGQ 99 (172)
T ss_dssp SSEEE--EEEETTHHHHTTHHHHHHHHHTT-EEEEEEEE
T ss_pred ccceE--EEeecccchHHHHHHHhhcccceeeEEEEecc
Confidence 34444 8999874 5788999999999998653
No 314
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=26.26 E-value=1.6e+02 Score=23.88 Aligned_cols=33 Identities=12% Similarity=0.137 Sum_probs=25.3
Q ss_pred CceEEEEcCch---------hhHHHHHHHcCCceEEEecccH
Q 014232 83 EIVCIIYDELM---------YFAESAANQLKLRSIILRTNSA 115 (428)
Q Consensus 83 ~~D~vI~D~~~---------~~~~~~A~~lgiP~v~~~~~~~ 115 (428)
++|+||+|... ....+++..++.|.+.+.....
T Consensus 99 ~~D~viid~~g~~~~~~~~~~~~~dl~~~~~~~vilV~~~~~ 140 (166)
T TIGR00347 99 KYDFVLVEGAGGLCVPITEEYTTADLIKLLQLPVILVVRVKL 140 (166)
T ss_pred cCCEEEEEcCCccccCCCCCCcHHHHHHHhCCCEEEEECCCC
Confidence 69999988741 2456789999999988876543
No 315
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=26.21 E-value=2.2e+02 Score=20.62 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=23.1
Q ss_pred EEEEEeccccc-CCHHHHHHHHHHHHhC--CCCeEEEEc
Q 014232 243 VLYVSLGSIVS-MDKKELKEMAWGLYNS--KQPFLWVLR 278 (428)
Q Consensus 243 vv~vsfGS~~~-~~~~~~~~~~~al~~~--~~~~iw~~~ 278 (428)
+|+++.||-.. .....+..+.+.+++. ...+.+.+.
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~~~~~~~v~~a~~ 40 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAESLPDFPYYVGFQ 40 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHHCCCCCEEEEEE
Confidence 78899999765 4455677777777653 344544443
No 316
>PRK00881 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional
Probab=26.19 E-value=74 Score=31.45 Aligned_cols=84 Identities=10% Similarity=0.042 Sum_probs=45.3
Q ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCC--CCCCCCC---CcCCHHHHHHHHHHhhchhHHHHHHHHH
Q 014232 1 MLQLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIPE--GLADDDI---YSGNIIAIIMHLNANCGAPFHKCLVQMM 75 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 75 (428)
++.||+.|.+.|+++. .|......+.+. ||.+..+.+ +.|+-.. .+..+ +...-+.. .....+-++++.
T Consensus 17 iv~lAk~L~~lGfeI~--AT~GTak~L~e~-GI~v~~V~k~TgfpEil~GRVKTLHP-~IhgGiLa--~r~~~~h~~~l~ 90 (513)
T PRK00881 17 IVEFAKALVELGVEIL--STGGTAKLLAEA-GIPVTEVSDVTGFPEILDGRVKTLHP-KIHGGILA--RRDNPEHVAALE 90 (513)
T ss_pred HHHHHHHHHHCCCEEE--EcchHHHHHHHC-CCeeEEeecccCCchhcCCccccCCc-hhhhhhcc--CCCCHHHHHHHH
Confidence 3689999999999974 455444555544 888877763 4554321 12222 22222211 111223344443
Q ss_pred HccCCCCCceEEEEcCc
Q 014232 76 KQQMPADEIVCIIYDEL 92 (428)
Q Consensus 76 ~~~~~~~~~D~vI~D~~ 92 (428)
+.. -. +.|+||++.+
T Consensus 91 ~~~-i~-~IDlVvvNLY 105 (513)
T PRK00881 91 EHG-IE-PIDLVVVNLY 105 (513)
T ss_pred HcC-CC-ceeEEEEeCc
Confidence 332 23 6899998865
No 317
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.91 E-value=1.3e+02 Score=27.46 Aligned_cols=57 Identities=11% Similarity=0.077 Sum_probs=40.2
Q ss_pred hhhccCCcCceeeccccchhHHhhh----cCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 313 DVLSHIAVGGFWSHCGWNSTLESIC----EGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 313 ~iL~~~~~~~~itHgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
++...+++ +|+=||=||++.+.+ .++|++++-.. .+|..- .++.+++.+++.+++.+
T Consensus 64 ~~~~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 64 ELGQYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLT--QIPREYMTDKLLPVLEG 124 (296)
T ss_pred hcCcCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEee--ccCHHHHHHHHHHHHcC
Confidence 33345677 999999999999965 37898887211 123222 36778888899888876
No 318
>PLN02293 adenine phosphoribosyltransferase
Probab=25.90 E-value=1.8e+02 Score=24.48 Aligned_cols=29 Identities=17% Similarity=0.180 Sum_probs=22.1
Q ss_pred CceEEE-EcCch-hhHHHHHHHcCCceEEEe
Q 014232 83 EIVCII-YDELM-YFAESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI-~D~~~-~~~~~~A~~lgiP~v~~~ 111 (428)
++|+|+ .+.-. +.+..+|..+|+|++..-
T Consensus 62 ~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~r 92 (187)
T PLN02293 62 GISVVAGIEARGFIFGPPIALAIGAKFVPLR 92 (187)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHCCCEEEEE
Confidence 689988 44433 678899999999987654
No 319
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=25.87 E-value=1.6e+02 Score=27.27 Aligned_cols=19 Identities=21% Similarity=0.384 Sum_probs=17.3
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
+||+.|++.||+|++....
T Consensus 15 ALA~~la~ng~~V~lw~r~ 33 (329)
T COG0240 15 ALAKVLARNGHEVRLWGRD 33 (329)
T ss_pred HHHHHHHhcCCeeEEEecC
Confidence 7999999999999988865
No 320
>PF10820 DUF2543: Protein of unknown function (DUF2543); InterPro: IPR020251 This entry contains proteins with no known function.
Probab=25.86 E-value=2.2e+02 Score=19.38 Aligned_cols=41 Identities=22% Similarity=0.431 Sum_probs=27.9
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhhc
Q 014232 378 EKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLEFFNL 427 (428)
Q Consensus 378 ~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 427 (428)
.-.|.++++| +++.+.|+. ++.+ +.|-...-+|++..+|++
T Consensus 37 QlLitRLmnn---eeIsEeaQ~--EMA~----eAgi~~~rID~IA~fLNq 77 (81)
T PF10820_consen 37 QLLITRLMNN---EEISEEAQQ--EMAS----EAGIDEQRIDDIANFLNQ 77 (81)
T ss_pred HHHHHHHhcc---HhhhHHHHH--HHHH----HcCCcHHHHHHHHHHHHH
Confidence 3456677888 667666643 2222 678888888888888875
No 321
>PF01497 Peripla_BP_2: Periplasmic binding protein; InterPro: IPR002491 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Most bacterial importers employ a periplasmic substrate-binding protein (PBP) that delivers the ligand to the extracellular gate of the TM domains. These proteins bind their substrates selectively and with high affinity, which is thought to ensure the specificity of the transport reaction. Binding proteins in Gram-negative bacteria are present within the periplasm, whereas those in Gram-positive bacteria are tethered to the cell membrane via the acylation of a cysteine residue that is an integral component of a lipoprotein signal sequence. In planta expression of a high-affinity iron-uptake system involving the siderophore chrysobactin in Erwinia chrysanthemi 3937 contributes greatly to invasive growth of this pathogen on its natural host, African violets []. The cobalamin (vitamin B12) and the iron transport systems share many common attributes and probably evolved from the same origin [, ]. The periplasmic-binding domain is composed of two subdomains, each consisting of a central beta-sheet and surrounding alpha-helices, linked by a rigid alpha-helix. The substrate binding site is located in a cleft between the two alpha/beta subdomains [].; GO: 0005488 binding; PDB: 2X4L_A 1N4A_B 1N2Z_B 1N4D_B 4DBL_J 2QI9_F 3EIW_A 3EIX_A 3MWG_A 3MWF_A ....
Probab=25.75 E-value=1.1e+02 Score=26.42 Aligned_cols=32 Identities=9% Similarity=0.009 Sum_probs=23.0
Q ss_pred CceEEEEcCch--hhHHHHHHHcCCceEEEeccc
Q 014232 83 EIVCIIYDELM--YFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 83 ~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~ 114 (428)
+||+||..... .....-....+||++.+....
T Consensus 60 ~PDlIi~~~~~~~~~~~~~~~~~~ip~~~~~~~~ 93 (238)
T PF01497_consen 60 KPDLIIGSSFYGQSEEIEKLLEAGIPVVVFDSSS 93 (238)
T ss_dssp --SEEEEETTSSCHHHHHHHHHTTSEEEEESSTT
T ss_pred CCCEEEEeccccchHHHHHHhcccceEEEeeccc
Confidence 79999987765 344555667899999998775
No 322
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=25.71 E-value=85 Score=23.78 Aligned_cols=66 Identities=11% Similarity=0.044 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEe-------ecChHhhhc---cCCcCceeecc
Q 014232 258 ELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVK-------WAPQKDVLS---HIAVGGFWSHC 327 (428)
Q Consensus 258 ~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~-------~~pq~~iL~---~~~~~~~itHg 327 (428)
....+++++++.+.+++.+...... .... -+..+.....+ |+....|+. .. ++...|+
T Consensus 13 ia~r~~ra~r~~Gi~tv~v~s~~d~--------~s~~--~~~ad~~~~~~~~~~~~~yl~~e~I~~ia~~~--g~~~i~p 80 (110)
T PF00289_consen 13 IAVRIIRALRELGIETVAVNSNPDT--------VSTH--VDMADEAYFEPPGPSPESYLNIEAIIDIARKE--GADAIHP 80 (110)
T ss_dssp HHHHHHHHHHHTTSEEEEEEEGGGT--------TGHH--HHHSSEEEEEESSSGGGTTTSHHHHHHHHHHT--TESEEES
T ss_pred HHHHHHHHHHHhCCcceeccCchhc--------cccc--ccccccceecCcchhhhhhccHHHHhhHhhhh--cCccccc
Confidence 3567899999999999887765321 1111 12334444444 676666553 33 4589999
Q ss_pred ccchhHHh
Q 014232 328 GWNSTLES 335 (428)
Q Consensus 328 G~~s~~ea 335 (428)
|+|-..|.
T Consensus 81 Gyg~lse~ 88 (110)
T PF00289_consen 81 GYGFLSEN 88 (110)
T ss_dssp TSSTTTTH
T ss_pred ccchhHHH
Confidence 99988776
No 323
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.47 E-value=95 Score=28.11 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=34.9
Q ss_pred cCCcCceeeccccchhHHhhh---cCCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 317 HIAVGGFWSHCGWNSTLESIC---EGVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 317 ~~~~~~~itHgG~~s~~eal~---~GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
..++ +|+-||=||+++++. .++|++++|... + |. -..++.+++.+++.+++.+
T Consensus 57 ~~d~--vi~iGGDGTlL~a~~~~~~~~pi~gIn~G~------------l--GF--l~~~~~~~~~~~l~~i~~g 112 (277)
T PRK03708 57 DVDF--IIAIGGDGTILRIEHKTKKDIPILGINMGT------------L--GF--LTEVEPEETFFALSRLLEG 112 (277)
T ss_pred CCCE--EEEEeCcHHHHHHHHhcCCCCeEEEEeCCC------------C--Cc--cccCCHHHHHHHHHHHHcC
Confidence 4566 999999999999984 356888775421 0 11 1134566777777777665
No 324
>PF06204 CBM_X: Putative carbohydrate binding domain ; InterPro: IPR009342 This domain is conserved in enzymes that have carbohydrates as substrate, and may be a carbohydrate-binding domain.; PDB: 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A 3ACS_A 1V7V_A 1V7X_A ....
Probab=25.40 E-value=23 Score=23.99 Aligned_cols=24 Identities=29% Similarity=0.252 Sum_probs=17.9
Q ss_pred eecChHhhhccCCcCceeeccccc
Q 014232 307 KWAPQKDVLSHIAVGGFWSHCGWN 330 (428)
Q Consensus 307 ~~~pq~~iL~~~~~~~~itHgG~~ 330 (428)
.-.|+..+|+..+.+.+||+.|.|
T Consensus 23 tp~P~~n~LsNg~y~~mvt~~G~G 46 (66)
T PF06204_consen 23 TPAPWVNVLSNGSYGVMVTNSGSG 46 (66)
T ss_dssp -SS--EEEE-SSSEEEEEETTSBE
T ss_pred CCCCEEEEeeCCcEEEEEcCCCce
Confidence 456788899999999999999986
No 325
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=25.35 E-value=69 Score=28.41 Aligned_cols=18 Identities=28% Similarity=0.305 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCeEEEEe
Q 014232 2 LQLGTILYSKGFSITVVH 19 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~ 19 (428)
+.+|++|.++|++|+++.
T Consensus 77 lv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 77 LVAARHLAHFGYEVTVCY 94 (246)
T ss_pred HHHHHHHHHCCCeEEEEE
Confidence 578999999999999887
No 326
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=25.14 E-value=68 Score=28.76 Aligned_cols=20 Identities=20% Similarity=0.438 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
.++|+.|++|||+|.++.-.
T Consensus 20 ~~~A~~lA~~g~~liLvaR~ 39 (265)
T COG0300 20 AELAKQLARRGYNLILVARR 39 (265)
T ss_pred HHHHHHHHHCCCEEEEEeCc
Confidence 36899999999999977544
No 327
>COG1619 LdcA Uncharacterized proteins, homologs of microcin C7 resistance protein MccF [Defense mechanisms]
Probab=25.03 E-value=1.9e+02 Score=26.75 Aligned_cols=62 Identities=10% Similarity=0.141 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHhhhccCCcCceeeccccchhHH
Q 014232 255 DKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSHCGWNSTLE 334 (428)
Q Consensus 255 ~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~e 334 (428)
+.+..+.+.+|+...+++.||.+.++.. .+ .+.+++....+=.|++. ||-+.-...++-
T Consensus 59 ~~~R~~dL~~af~d~~vk~Il~~rGGyg----------s~---------rlLp~ld~~~i~~~pKi--fiGySDiTall~ 117 (313)
T COG1619 59 DEERAEDLMSAFSDPDVKAILCVRGGYG----------SN---------RLLPYLDYDLIRNHPKI--FIGYSDITALLL 117 (313)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEcccCCC----------hh---------hhhhhcchHHHhcCCce--EEEecHHHHHHH
Confidence 3455777999999999999999876531 11 24444444444455555 555555555544
Q ss_pred hhh
Q 014232 335 SIC 337 (428)
Q Consensus 335 al~ 337 (428)
|++
T Consensus 118 ai~ 120 (313)
T COG1619 118 AIL 120 (313)
T ss_pred HHH
Confidence 444
No 328
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=24.94 E-value=1.2e+02 Score=25.72 Aligned_cols=30 Identities=23% Similarity=0.527 Sum_probs=22.5
Q ss_pred ceEEEEcCchhhH-------HHHHHHcCCceEEEecc
Q 014232 84 IVCIIYDELMYFA-------ESAANQLKLRSIILRTN 113 (428)
Q Consensus 84 ~D~vI~D~~~~~~-------~~~A~~lgiP~v~~~~~ 113 (428)
.|||+.|-..++. ..+|..+|||++..-.-
T Consensus 83 ~~~v~IDEaQF~~~~~v~~l~~lad~lgi~Vi~~GL~ 119 (201)
T COG1435 83 VDCVLIDEAQFFDEELVYVLNELADRLGIPVICYGLD 119 (201)
T ss_pred cCEEEEehhHhCCHHHHHHHHHHHhhcCCEEEEeccc
Confidence 6899999865443 35788899999987533
No 329
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.88 E-value=1.3e+02 Score=27.77 Aligned_cols=56 Identities=14% Similarity=0.163 Sum_probs=39.8
Q ss_pred hhccCCcCceeeccccchhHHhhhc----CCceeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcC
Q 014232 314 VLSHIAVGGFWSHCGWNSTLESICE----GVPMICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 314 iL~~~~~~~~itHgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
+...+++ +|+=||=||++.+.+. ++|++++... .+|.-- ....+++.+++.+++.+
T Consensus 69 ~~~~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 69 AADGCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA--EAEAEDLDEAVERVVDR 128 (306)
T ss_pred cccCCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec--cCCHHHHHHHHHHHHcC
Confidence 3345677 9999999999998764 8898887321 123222 36678888888888876
No 330
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=24.52 E-value=1.4e+02 Score=24.20 Aligned_cols=92 Identities=13% Similarity=0.103 Sum_probs=48.0
Q ss_pred HHHHHHHHhC-CCeEEEEeCCCCCCCCC------CCCCc-eEEEcCCCCCCCCCCcCCHHHHHHHHHHhhchhHHHHHHH
Q 014232 2 LQLGTILYSK-GFSITVVHTDFNSPNPS------NHPKF-SFQSIPEGLADDDIYSGNIIAIIMHLNANCGAPFHKCLVQ 73 (428)
Q Consensus 2 l~La~~L~~r-Gh~Vt~~~~~~~~~~~~------~~~gi-~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 73 (428)
+..|++|++. |.+|+.++.-....... ...|+ +.+.+++..-..+ +. ..+.+.+.+
T Consensus 21 l~~A~~La~~~g~~v~av~~G~~~~~~~~l~~~l~~~G~d~v~~~~~~~~~~~----~~------------~~~a~~l~~ 84 (164)
T PF01012_consen 21 LEAARRLAEALGGEVTAVVLGPAEEAAEALRKALAKYGADKVYHIDDPALAEY----DP------------EAYADALAE 84 (164)
T ss_dssp HHHHHHHHHCTTSEEEEEEEETCCCHHHHHHHHHHSTTESEEEEEE-GGGTTC-----H------------HHHHHHHHH
T ss_pred HHHHHHHHhhcCCeEEEEEEecchhhHHHHhhhhhhcCCcEEEEecCcccccc----CH------------HHHHHHHHH
Confidence 6789999885 88888776542111111 11244 2333332111000 11 122234444
Q ss_pred HHHccCCCCCceEEEEcCch---hhHHHHHHHcCCceEEEecc
Q 014232 74 MMKQQMPADEIVCIIYDELM---YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 74 l~~~~~~~~~~D~vI~D~~~---~~~~~~A~~lgiP~v~~~~~ 113 (428)
+.++. +||+|+.-... ..+..+|.+||.|++.-.+.
T Consensus 85 ~~~~~----~~~lVl~~~t~~g~~la~~lA~~L~~~~v~~v~~ 123 (164)
T PF01012_consen 85 LIKEE----GPDLVLFGSTSFGRDLAPRLAARLGAPLVTDVTD 123 (164)
T ss_dssp HHHHH----T-SEEEEESSHHHHHHHHHHHHHHT-EEEEEEEE
T ss_pred HHHhc----CCCEEEEcCcCCCCcHHHHHHHHhCCCccceEEE
Confidence 44443 79999976643 34567899999999886544
No 331
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=24.41 E-value=1.7e+02 Score=26.39 Aligned_cols=31 Identities=23% Similarity=0.260 Sum_probs=23.9
Q ss_pred CceEEEE-cCch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIY-DELM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~-D~~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
++|+|++ +.-. +.|..+|..+|+|.++.--.
T Consensus 128 ~iD~VvgvetkGIpLA~avA~~L~vp~vivRK~ 160 (268)
T TIGR01743 128 EIDAVMTVATKGIPLAYAVASVLNVPLVIVRKD 160 (268)
T ss_pred CCCEEEEEccchHHHHHHHHHHHCCCEEEEEEC
Confidence 6899984 3333 77889999999999887643
No 332
>PRK09213 pur operon repressor; Provisional
Probab=24.36 E-value=1.7e+02 Score=26.44 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=23.6
Q ss_pred CceEEEE-cCch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIY-DELM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~-D~~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
++|+|++ +.-. +.+..+|..+|+|.++.--.
T Consensus 130 ~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK~ 162 (271)
T PRK09213 130 KIDAVMTVETKGIPLAYAVANYLNVPFVIVRRD 162 (271)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEEC
Confidence 6899984 3333 77888999999999887643
No 333
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.31 E-value=1.2e+02 Score=26.83 Aligned_cols=31 Identities=6% Similarity=-0.074 Sum_probs=20.8
Q ss_pred CceEEEEcCchhh--HH-HHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELMYF--AE-SAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~~~--~~-~~A~~lgiP~v~~~~~ 113 (428)
+||+||....... .. .+.+.+|||++.+...
T Consensus 74 ~PDLIi~~~~~~~~~~~~~l~~~~gipvv~~~~~ 107 (262)
T cd01147 74 KPDVVIDVGSDDPTSIADDLQKKTGIPVVVLDGG 107 (262)
T ss_pred CCCEEEEecCCccchhHHHHHHhhCCCEEEEecC
Confidence 7999998754432 12 3444589999888654
No 334
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.27 E-value=4.4e+02 Score=24.49 Aligned_cols=30 Identities=17% Similarity=0.011 Sum_probs=23.4
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEeccc
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~ 114 (428)
..|++|+-. .....+|..+|.|+|.+...+
T Consensus 251 ~a~l~I~~D--Sg~~HlAaA~~~P~I~iyg~t 280 (334)
T COG0859 251 GADLVIGND--SGPMHLAAALGTPTIALYGPT 280 (334)
T ss_pred cCCEEEccC--ChHHHHHHHcCCCEEEEECCC
Confidence 579988542 357889999999999988653
No 335
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=24.19 E-value=1.2e+02 Score=29.23 Aligned_cols=27 Identities=7% Similarity=-0.112 Sum_probs=22.5
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEec
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILRT 112 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 112 (428)
+||++|... .+..+|+++|||.+.+..
T Consensus 350 ~pDl~Ig~s---~~~~~a~~~giP~~r~~~ 376 (416)
T cd01980 350 RPDLAIGTT---PLVQYAKEKGIPALYYTN 376 (416)
T ss_pred CCCEEEeCC---hhhHHHHHhCCCEEEecC
Confidence 899999884 477899999999988653
No 336
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=24.11 E-value=1.7e+02 Score=25.57 Aligned_cols=19 Identities=26% Similarity=0.457 Sum_probs=16.6
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
+|+-.|+.+|+.|.++-..
T Consensus 22 nig~aLA~~GkKv~liD~D 40 (272)
T COG2894 22 NIGTALAQLGKKVVLIDFD 40 (272)
T ss_pred HHHHHHHHcCCeEEEEecC
Confidence 6889999999999988666
No 337
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=24.02 E-value=3e+02 Score=24.77 Aligned_cols=60 Identities=20% Similarity=0.242 Sum_probs=37.9
Q ss_pred eecChHhhhccCCcCceeecc-ccchhHHhhhcCCceecc--ccc-cchhhh-HHHHhhhheeEEEcC
Q 014232 307 KWAPQKDVLSHIAVGGFWSHC-GWNSTLESICEGVPMICR--PGF-GDQRVS-ARYVSHVWRIGLQLE 369 (428)
Q Consensus 307 ~~~pq~~iL~~~~~~~~itHg-G~~s~~eal~~GvP~v~~--P~~-~DQ~~n-a~~v~~~~g~g~~l~ 369 (428)
++=|+.++|+.++. +|.-. ..|-..||...|+|+-+. |.+ .+.+.- -..+++ .|++.-.+
T Consensus 234 g~NPY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~e-q~~AR~f~ 298 (329)
T COG3660 234 GYNPYIDMLAAADY--IISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVE-QKIARPFE 298 (329)
T ss_pred CCCchHHHHhhcce--EEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHH-hhhccccC
Confidence 34478899988887 76555 468889999999998763 333 233222 233334 35555544
No 338
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=23.98 E-value=1.1e+02 Score=29.73 Aligned_cols=27 Identities=11% Similarity=0.201 Sum_probs=21.8
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEec
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILRT 112 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 112 (428)
+||++|.+. ....+|+++|+|++.+..
T Consensus 370 ~pdliig~~---~~~~~a~~~gip~~~~~~ 396 (430)
T cd01981 370 EPELIFGTQ---MERHIGKRLDIPCAVISA 396 (430)
T ss_pred CCCEEEecc---hhhHHHHHcCCCEEEEeC
Confidence 799999987 355678999999987754
No 339
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=23.95 E-value=92 Score=26.11 Aligned_cols=23 Identities=22% Similarity=0.449 Sum_probs=19.2
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDFNS 24 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~~~ 24 (428)
..|.+.|.++|++|.++.|+.-.
T Consensus 16 ~~lir~L~~~g~~V~vv~T~~A~ 38 (181)
T TIGR00421 16 IRLLEVLKEAGVEVHLVISDWAK 38 (181)
T ss_pred HHHHHHHHHCCCEEEEEECccHH
Confidence 46889999999999999888433
No 340
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=23.94 E-value=1.1e+02 Score=30.62 Aligned_cols=26 Identities=12% Similarity=0.190 Sum_probs=21.8
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEe
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 111 (428)
+||+||.+. +...+|+++|||++.++
T Consensus 374 ~pdliiGs~---~er~ia~~lgiP~~~is 399 (513)
T CHL00076 374 EPSAIFGTQ---MERHIGKRLDIPCGVIS 399 (513)
T ss_pred CCCEEEECc---hhhHHHHHhCCCEEEee
Confidence 799999987 45667899999997766
No 341
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=23.58 E-value=1.6e+02 Score=25.94 Aligned_cols=29 Identities=7% Similarity=0.062 Sum_probs=21.8
Q ss_pred CceEEEEc-Cc-hhhHHHHHHHcCCceEEEe
Q 014232 83 EIVCIIYD-EL-MYFAESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI~D-~~-~~~~~~~A~~lgiP~v~~~ 111 (428)
++|+|++= .- .+.+..+|..+|+|.++.-
T Consensus 111 ~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~R 141 (238)
T PRK08558 111 RVDVVLTAATDGIPLAVAIASYFGADLVYAK 141 (238)
T ss_pred CCCEEEEECcccHHHHHHHHHHHCcCEEEEE
Confidence 68998843 22 3778889999999988753
No 342
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=23.57 E-value=1e+02 Score=27.54 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=24.0
Q ss_pred CceEEE-EcCch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCII-YDELM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
.||+|| .|+.. ..+..=|.++|||+|.+.-+
T Consensus 157 ~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivDT 189 (258)
T PRK05299 157 LPDALFVVDPNKEHIAVKEARKLGIPVVAIVDT 189 (258)
T ss_pred CCCEEEEeCCCccHHHHHHHHHhCCCEEEEeeC
Confidence 588877 67655 45667788999999998755
No 343
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.54 E-value=1.5e+02 Score=28.28 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=19.8
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCC
Q 014232 3 QLGTILYSKGFSITVVHTDFNSP 25 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~~~~~ 25 (428)
.||..+.++|+.+-+++.+.++.
T Consensus 120 KlA~y~kkkG~K~~LvcaDTFRa 142 (483)
T KOG0780|consen 120 KLAYYYKKKGYKVALVCADTFRA 142 (483)
T ss_pred HHHHHHHhcCCceeEEeeccccc
Confidence 68999999999999999886664
No 344
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=23.39 E-value=63 Score=28.15 Aligned_cols=21 Identities=29% Similarity=0.502 Sum_probs=15.5
Q ss_pred CHHHHHHHHhCCCeEEEEeCC
Q 014232 1 MLQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 1 ~l~La~~L~~rGh~Vt~~~~~ 21 (428)
|-+.|.+|.++|++|.++...
T Consensus 51 MRhfa~~L~~~G~~V~Y~~~~ 71 (224)
T PF04244_consen 51 MRHFADELRAKGFRVHYIELD 71 (224)
T ss_dssp HHHHHHHHHHTT--EEEE-TT
T ss_pred HHHHHHHHHhCCCEEEEEeCC
Confidence 557899999999999988766
No 345
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=23.34 E-value=1.1e+02 Score=30.44 Aligned_cols=27 Identities=11% Similarity=0.213 Sum_probs=22.4
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEec
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILRT 112 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 112 (428)
+||+||.+. ....+|+++|||++.+..
T Consensus 364 ~pdliiG~~---~er~~a~~lgip~~~i~~ 390 (511)
T TIGR01278 364 EPELVLGTQ---MERHSAKRLDIPCGVISA 390 (511)
T ss_pred CCCEEEECh---HHHHHHHHcCCCEEEecC
Confidence 799999987 467789999999987654
No 346
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.33 E-value=1.3e+02 Score=26.91 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=36.9
Q ss_pred cCCcCceeeccccchhHHhhh-cCCceeccccccchhhhHHHHhhhhe-eEEEcCCccCHHHHHHHHHHHhcC
Q 014232 317 HIAVGGFWSHCGWNSTLESIC-EGVPMICRPGFGDQRVSARYVSHVWR-IGLQLENDLEKGEVEKAVKQLMVE 387 (428)
Q Consensus 317 ~~~~~~~itHgG~~s~~eal~-~GvP~v~~P~~~DQ~~na~~v~~~~g-~g~~l~~~~~~~~l~~ai~~vl~~ 387 (428)
++++ +|+=||=||++.|++ .++|++++- .| +|.. ...+.+++.+++.+++.+
T Consensus 41 ~~d~--vi~iGGDGT~L~a~~~~~~Pilgin---------------~G~lGfl--~~~~~~~~~~~l~~~~~g 94 (256)
T PRK14075 41 TADL--IIVVGGDGTVLKAAKKVGTPLVGFK---------------AGRLGFL--SSYTLEEIDRFLEDLKNW 94 (256)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCEEEEe---------------CCCCccc--cccCHHHHHHHHHHHHcC
Confidence 4566 999999999999977 477777662 12 2211 146778888888888775
No 347
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional
Probab=23.31 E-value=7e+02 Score=25.45 Aligned_cols=52 Identities=12% Similarity=0.227 Sum_probs=26.6
Q ss_pred eccccchhHHhhhcC--Ccee--cccc-ccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHh
Q 014232 325 SHCGWNSTLESICEG--VPMI--CRPG-FGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLM 385 (428)
Q Consensus 325 tHgG~~s~~eal~~G--vP~v--~~P~-~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl 385 (428)
.+||+|+........ +|+. .+|- |.+ ......+.+.. .++++.|.+.|++++
T Consensus 524 ~~GG~gs~v~~~l~~~~~~~~~~gi~d~f~~-~g~~~~l~~~~--------Gl~~~~I~~~i~~~l 580 (581)
T PRK12315 524 LDGGFGEKIARYYGNSDMKVLNYGAKKEFND-RVPVEELYKRN--------HLTPEQIVEDILSVL 580 (581)
T ss_pred cCCCHHHHHHHHHHcCCCeEEEecCCCCCCC-CCCHHHHHHHH--------CcCHHHHHHHHHHHh
Confidence 468998866665543 3333 3333 222 22222222221 367778887777654
No 348
>cd01143 YvrC Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.
Probab=23.23 E-value=1.4e+02 Score=24.89 Aligned_cols=31 Identities=6% Similarity=-0.002 Sum_probs=21.0
Q ss_pred CceEEEEcCchhh-HHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDELMYF-AESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~~~~~-~~~~A~~lgiP~v~~~~~ 113 (428)
+||+||....... ...--++.|+|++.+...
T Consensus 60 ~PDlii~~~~~~~~~~~~l~~~gi~v~~~~~~ 91 (195)
T cd01143 60 KPDLVIVSSSSLAELLEKLKDAGIPVVVLPAA 91 (195)
T ss_pred CCCEEEEcCCcCHHHHHHHHHcCCcEEEeCCC
Confidence 7999998654322 334456789998887643
No 349
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=23.00 E-value=83 Score=25.91 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcC
Q 014232 3 QLGTILYSKGFSITVVHTDFNSPNPSNHPKFSFQSIP 39 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~~~~~~~~~~~gi~f~~l~ 39 (428)
.|+++|.++||+|+.++-....... ..+++.+...
T Consensus 13 ~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d 47 (183)
T PF13460_consen 13 ALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGD 47 (183)
T ss_dssp HHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESC
T ss_pred HHHHHHHHCCCEEEEEecCchhccc--ccccccceee
Confidence 5899999999999988755322111 3467765544
No 350
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit. This model represents the alpha subunit, or the N-terminal region, of sulfopyruvate decarboxylase, an enzyme of coenzyme M biosynthesis. Coenzyme M is found almost exclusively in the methanogenic archaea. However, the enzyme also occurs in Roseovarius nubinhibens ISM in a degradative pathway, where the resulting sulfoacetaldehyde is desulfonated to acetyl phosphate, then converted to acetyl-CoA (see PubMed:19581363).
Probab=22.98 E-value=1.6e+02 Score=23.94 Aligned_cols=25 Identities=16% Similarity=0.155 Sum_probs=19.3
Q ss_pred ceeecccc----chhHHhh-hcCCceeccc
Q 014232 322 GFWSHCGW----NSTLESI-CEGVPMICRP 346 (428)
Q Consensus 322 ~~itHgG~----~s~~eal-~~GvP~v~~P 346 (428)
.+..+.|. |++++|. ..++|+|++=
T Consensus 62 v~~~~sG~gn~~~~l~~a~~~~~~Pvl~i~ 91 (157)
T TIGR03845 62 ILMQSSGLGNSINALASLNKTYGIPLPILA 91 (157)
T ss_pred EEEeCCcHHHHHHHHHHHHHcCCCCEEEEE
Confidence 47777775 4667777 9999999974
No 351
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=22.85 E-value=5.3e+02 Score=23.52 Aligned_cols=68 Identities=15% Similarity=0.050 Sum_probs=40.6
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHhhhccCCcCceeeccc--cch
Q 014232 254 MDKKELKEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVLSHIAVGGFWSHCG--WNS 331 (428)
Q Consensus 254 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG--~~s 331 (428)
.+...+..+.++++++|.++++-++....... +... ...++.=..-.-..|+++.++.|+| +.=
T Consensus 141 ~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~-----~~~~---------~~~p~~~~~va~~fP~l~IVl~H~G~~~p~ 206 (293)
T COG2159 141 PDDPRLYPIYEAAEELGVPVVIHTGAGPGGAG-----LEKG---------HSDPLYLDDVARKFPELKIVLGHMGEDYPW 206 (293)
T ss_pred CCChHHHHHHHHHHHcCCCEEEEeCCCCCCcc-----cccC---------CCCchHHHHHHHHCCCCcEEEEecCCCCch
Confidence 44455788999999999999996665321100 0000 0111111333456789999999999 555
Q ss_pred hHHh
Q 014232 332 TLES 335 (428)
Q Consensus 332 ~~ea 335 (428)
..|+
T Consensus 207 ~~~a 210 (293)
T COG2159 207 ELEA 210 (293)
T ss_pred hHHH
Confidence 5555
No 352
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.60 E-value=1.4e+02 Score=27.42 Aligned_cols=46 Identities=22% Similarity=0.312 Sum_probs=33.0
Q ss_pred hhhhcccCCCCcEEEEEeccccc--C----------C-------HHHHHHHHHHHHhCCCCeEEE
Q 014232 231 CISWLNNQAPNSVLYVSLGSIVS--M----------D-------KKELKEMAWGLYNSKQPFLWV 276 (428)
Q Consensus 231 ~~~~l~~~~~~~vv~vsfGS~~~--~----------~-------~~~~~~~~~al~~~~~~~iw~ 276 (428)
+.+.|+..++..+|.|.||+.-. + + ...+++|+++......+|+|+
T Consensus 168 i~~~l~~~~~~a~vVV~lGaND~q~~~~gd~~~kf~S~~W~~eY~kRvd~~l~ia~~~~~~V~Wv 232 (354)
T COG2845 168 IPELLDKHPKPAAVVVMLGANDRQDFKVGDVYEKFRSDEWTKEYEKRVDAILKIAHTHKVPVLWV 232 (354)
T ss_pred HHHHHHhcCCccEEEEEecCCCHHhcccCCeeeecCchHHHHHHHHHHHHHHHHhcccCCcEEEe
Confidence 67778887667789999998743 1 1 223456777777788899997
No 353
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=22.48 E-value=2e+02 Score=24.35 Aligned_cols=31 Identities=16% Similarity=0.143 Sum_probs=23.7
Q ss_pred CceEEE-EcCc-hhhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCII-YDEL-MYFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI-~D~~-~~~~~~~A~~lgiP~v~~~~~ 113 (428)
++|+|+ .+.- .+.+..+|..+|+|.++.--.
T Consensus 50 ~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vRK~ 82 (191)
T TIGR01744 50 GITKIVTIEASGIAPAIMTGLKLGVPVVFARKK 82 (191)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEeC
Confidence 689998 3333 267888999999999998644
No 354
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=22.41 E-value=87 Score=22.21 Aligned_cols=19 Identities=16% Similarity=0.415 Sum_probs=15.6
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
.+.+.|.++||+|+=+...
T Consensus 12 ~v~~~L~~~GyeVv~l~~~ 30 (80)
T PF03698_consen 12 NVKEALREKGYEVVDLENE 30 (80)
T ss_pred HHHHHHHHCCCEEEecCCc
Confidence 5788999999999966654
No 355
>PRK13016 dihydroxy-acid dehydratase; Provisional
Probab=22.39 E-value=1.6e+02 Score=29.64 Aligned_cols=47 Identities=11% Similarity=0.026 Sum_probs=35.6
Q ss_pred chhHHHHHHHHHHccCCCCCceEEE----EcCchhhHHHHHHHcCCceEEEeccc
Q 014232 64 GAPFHKCLVQMMKQQMPADEIVCII----YDELMYFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 64 ~~~l~~~l~~l~~~~~~~~~~D~vI----~D~~~~~~~~~A~~lgiP~v~~~~~~ 114 (428)
++.+.+.++...+.. .+|.+| ||=..+..+..|-+++||.|++...+
T Consensus 100 RelIAdsiE~~~~a~----~~Dg~V~l~~CDK~~Pg~lMaaarlniPsI~v~GG~ 150 (577)
T PRK13016 100 RNLLAMETEELIRSH----PVDGAVLMGGCDKTTPGLVMGAISMGLPMIYLPAGP 150 (577)
T ss_pred HHHHHHHHHHHHhcC----CccceEEeccCCCCcHHHHHHHHhcCCCEEEEecCC
Confidence 445556667776654 789887 67767888888999999999987654
No 356
>PRK13017 dihydroxy-acid dehydratase; Provisional
Probab=22.15 E-value=1.7e+02 Score=29.55 Aligned_cols=48 Identities=17% Similarity=0.098 Sum_probs=36.1
Q ss_pred hchhHHHHHHHHHHccCCCCCceEEE----EcCchhhHHHHHHHcCCceEEEeccc
Q 014232 63 CGAPFHKCLVQMMKQQMPADEIVCII----YDELMYFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 63 ~~~~l~~~l~~l~~~~~~~~~~D~vI----~D~~~~~~~~~A~~lgiP~v~~~~~~ 114 (428)
.++.+.+.++.+.+.. .+|.+| ||=..+.....|-++++|.|++...+
T Consensus 104 sRelIAd~iE~~~~a~----~~Dg~V~i~gCDK~~PG~lMaaarlniP~i~v~GG~ 155 (596)
T PRK13017 104 DRNLAYLGLVEILYGY----PLDGVVLTTGCDKTTPACLMAAATVDLPAIVLSGGP 155 (596)
T ss_pred CHHHHHHHHHHHHhcC----CcceEEEeccCCCccHHHHHHHHhcCCCEEEEeCCC
Confidence 3445666777776654 789887 67766777888899999999987664
No 357
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=22.13 E-value=3.6e+02 Score=27.31 Aligned_cols=27 Identities=15% Similarity=0.185 Sum_probs=22.1
Q ss_pred cCceeeccccc------hhHHhhhcCCceeccc
Q 014232 320 VGGFWSHCGWN------STLESICEGVPMICRP 346 (428)
Q Consensus 320 ~~~~itHgG~~------s~~eal~~GvP~v~~P 346 (428)
.+++++|.|-| ++++|...++|||++-
T Consensus 69 ~gv~~~t~GpG~~N~l~gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 69 PGVCTATSGPGTTNLVTGLITAYWDSSPVIAIT 101 (572)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 34488898854 7899999999999984
No 358
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=22.09 E-value=89 Score=24.87 Aligned_cols=20 Identities=20% Similarity=0.215 Sum_probs=16.9
Q ss_pred HHHHHHHhCCCeEEEEeCCC
Q 014232 3 QLGTILYSKGFSITVVHTDF 22 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~~ 22 (428)
-+|..|++.||+|++++...
T Consensus 12 ~~a~~L~~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 12 LYAARLAQAGHDVTLVSRSP 31 (151)
T ss_dssp HHHHHHHHTTCEEEEEESHH
T ss_pred HHHHHHHHCCCceEEEEccc
Confidence 36888999999999998775
No 359
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=21.88 E-value=86 Score=27.37 Aligned_cols=18 Identities=22% Similarity=0.335 Sum_probs=15.8
Q ss_pred HHHHHHHHhCCCeEEEEe
Q 014232 2 LQLGTILYSKGFSITVVH 19 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~ 19 (428)
.++|++|+++|++|+++.
T Consensus 29 ~AIA~~la~~Ga~Vvlv~ 46 (227)
T TIGR02114 29 KIITETFLSAGHEVTLVT 46 (227)
T ss_pred HHHHHHHHHCCCEEEEEc
Confidence 478999999999999774
No 360
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=21.85 E-value=88 Score=28.20 Aligned_cols=19 Identities=21% Similarity=0.326 Sum_probs=16.3
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
+|+.+|.+.||+||+++-.
T Consensus 13 ~L~~~L~~~gh~v~iltR~ 31 (297)
T COG1090 13 ALTARLRKGGHQVTILTRR 31 (297)
T ss_pred HHHHHHHhCCCeEEEEEcC
Confidence 5788899999999998854
No 361
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=21.77 E-value=5.4e+02 Score=22.41 Aligned_cols=48 Identities=17% Similarity=0.305 Sum_probs=32.0
Q ss_pred hhHHHHHHHHhhCC-CCcceeccCCCCCCCCCCCCccccchhhhhcccCCCCcEEEEEeccccc
Q 014232 191 IEQSSLSQLQQQCN-IPIFPVGPLHKFAPSSPGSLLKEDTSCISWLNNQAPNSVLYVSLGSIVS 253 (428)
Q Consensus 191 le~~~l~~~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vsfGS~~~ 253 (428)
+-+.++..++.-|| .++.++|++..... + +.+||+.+ ++.|+.||...
T Consensus 144 ~G~~~ikal~~p~p~i~~~ptGGV~~~~~---------n--~~~yl~aG----a~avg~Gs~L~ 192 (222)
T PRK07114 144 YGPGFVKAIKGPMPWTKIMPTGGVEPTEE---------N--LKKWFGAG----VTCVGMGSKLI 192 (222)
T ss_pred cCHHHHHHHhccCCCCeEEeCCCCCcchh---------c--HHHHHhCC----CEEEEEChhhc
Confidence 34566666666565 34888999865211 2 78899853 69999999753
No 362
>KOG0332 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=21.73 E-value=77 Score=29.78 Aligned_cols=19 Identities=21% Similarity=0.392 Sum_probs=16.4
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
.|+++|.+.||+|+++...
T Consensus 345 ~l~~~m~~~Gh~V~~l~G~ 363 (477)
T KOG0332|consen 345 WLYEEMRAEGHQVSLLHGD 363 (477)
T ss_pred HHHHHHHhcCceeEEeecc
Confidence 5789999999999988665
No 363
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=21.73 E-value=1.3e+02 Score=30.06 Aligned_cols=26 Identities=8% Similarity=0.194 Sum_probs=21.6
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEe
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 111 (428)
+||+||.+. ....+|+++|||++.+.
T Consensus 362 ~PdliiG~~---~er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 362 APELVLGTQ---MERHSAKRLGIPCAVIS 387 (519)
T ss_pred CCCEEEEcc---hHHHHHHHcCCCEEEec
Confidence 799999876 46678999999997765
No 364
>PF07319 DnaI_N: Primosomal protein DnaI N-terminus; InterPro: IPR009928 This entry represents the N terminus (approximately 120 residues) of bacterial primosomal DnaI proteins, although one family member appears to be of viral origin. DnaI is one of the components of the Bacillus subtilis replication restart primosome, and is required for the DnaB75-dependent loading of the DnaC helicase [].; PDB: 2K7R_A.
Probab=21.72 E-value=81 Score=23.08 Aligned_cols=10 Identities=10% Similarity=0.391 Sum_probs=4.4
Q ss_pred HHHHHHHhcC
Q 014232 378 EKAVKQLMVE 387 (428)
Q Consensus 378 ~~ai~~vl~~ 387 (428)
.+.+++||.|
T Consensus 22 ~~l~~~vl~d 31 (94)
T PF07319_consen 22 EQLKQEVLSD 31 (94)
T ss_dssp HHHHHHHTT-
T ss_pred HHHHHHHHcC
Confidence 4444455555
No 365
>TIGR01011 rpsB_bact ribosomal protein S2, bacterial type. TIGR01012 describes the archaeal and cytosolic forms.
Probab=21.66 E-value=1.2e+02 Score=26.42 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=23.8
Q ss_pred CceEEE-EcCch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCII-YDELM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
.||+|| .|+.. ..+..=|.++|||+|.+.-+
T Consensus 155 ~Pd~vii~d~~~~~~ai~Ea~~l~IP~I~ivDT 187 (225)
T TIGR01011 155 LPDLLFVIDPVKEKIAVAEARKLGIPVVAIVDT 187 (225)
T ss_pred CCCEEEEeCCCccHHHHHHHHHcCCCEEEEeeC
Confidence 588877 67654 45667788999999998755
No 366
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=21.45 E-value=1.5e+02 Score=28.72 Aligned_cols=24 Identities=29% Similarity=0.404 Sum_probs=20.9
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCCC
Q 014232 3 QLGTILYSKGFSITVVHTDFNSPN 26 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~~~~~~ 26 (428)
.||+.|.++|+.|-+++.+-+++-
T Consensus 119 KLA~~lkk~~~kvllVaaD~~RpA 142 (451)
T COG0541 119 KLAKYLKKKGKKVLLVAADTYRPA 142 (451)
T ss_pred HHHHHHHHcCCceEEEecccCChH
Confidence 689999999999999998877643
No 367
>PRK14098 glycogen synthase; Provisional
Probab=21.43 E-value=78 Score=31.41 Aligned_cols=19 Identities=16% Similarity=0.340 Sum_probs=17.1
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
+|.+.|+++||+|.++.|.
T Consensus 30 ~Lp~al~~~g~~v~v~~P~ 48 (489)
T PRK14098 30 SFPQALEEEGFEARIMMPK 48 (489)
T ss_pred HHHHHHHHCCCeEEEEcCC
Confidence 6899999999999988875
No 368
>PF00920 ILVD_EDD: Dehydratase family; InterPro: IPR000581 Two dehydratases, dihydroxy-acid dehydratase (4.2.1.9 from EC) (gene ilvD or ILV3) and 6-phosphogluconate dehydratase (4.2.1.12 from EC) (gene edd) have been shown to be evolutionary related []. Dihydroxy-acid dehydratase catalyses the fourth step in the biosynthesis of isoleucine and valine, the dehydratation of 2,3-dihydroxy-isovaleic acid into alpha-ketoisovaleric acid. 6-Phosphogluconate dehydratase catalyses the first step in the Entner-Doudoroff pathway, the dehydratation of 6-phospho-D-gluconate into 6-phospho-2-dehydro-3-deoxy-D-gluconate. Another protein containing this signature is the Escherichia coli hypothetical protein yjhG. The N-terminal part of the proteins contains a cysteine that could be involved in the binding of a 2Fe-2S iron-sulphur cluster [].; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2GP4_B.
Probab=21.38 E-value=1.3e+02 Score=29.91 Aligned_cols=47 Identities=15% Similarity=0.196 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHccCCCCCceEEE----EcCchhhHHHHHHHcCCceEEEecccH
Q 014232 65 APFHKCLVQMMKQQMPADEIVCII----YDELMYFAESAANQLKLRSIILRTNSA 115 (428)
Q Consensus 65 ~~l~~~l~~l~~~~~~~~~~D~vI----~D~~~~~~~~~A~~lgiP~v~~~~~~~ 115 (428)
+.+.+.++.+.+.. .+|-+| ||=..+.....|-++++|.|++...+.
T Consensus 65 elIAd~iE~~~~a~----~~Dg~V~l~gCDK~~Pg~lMaaarlniPsi~v~gGpm 115 (521)
T PF00920_consen 65 ELIADSIEEMVRAH----PFDGMVLLGGCDKIVPGMLMAAARLNIPSIFVYGGPM 115 (521)
T ss_dssp HHHHHHHHHHHTT-------SEEEEE--STTCCHHHHHHHHTTTS-EEE------
T ss_pred HHHHHHHHHHHhCC----CcceEEEeccCCCccHHHHHHHHHcCCCEEEEecCCC
Confidence 44556666666654 789888 677678888888899999999987754
No 369
>CHL00067 rps2 ribosomal protein S2
Probab=21.33 E-value=1.2e+02 Score=26.47 Aligned_cols=31 Identities=19% Similarity=0.182 Sum_probs=23.6
Q ss_pred CceEEE-EcCch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCII-YDELM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
.||+|| .|+.. ..+..=|.++|||+|.+.-+
T Consensus 161 ~P~~iiv~d~~~~~~ai~Ea~~l~IPvIaivDT 193 (230)
T CHL00067 161 LPDIVIIIDQQEEYTALRECRKLGIPTISILDT 193 (230)
T ss_pred CCCEEEEeCCcccHHHHHHHHHcCCCEEEEEeC
Confidence 588877 66654 45667788999999998755
No 370
>TIGR00781 ccoO cytochrome c oxidase, cbb3-type, subunit II. This model describes the monoheme subunit of the cbb3-type cytochrome oxidase, found in a subset of Proteobacterial species. Species having this protein also have CcoN (subunit I, containing copper and two heme groups), CcoP (subunit III, containing two hemes), and CcoQ (essential for incorporation of the prosthetic groups).
Probab=21.30 E-value=2.3e+02 Score=24.67 Aligned_cols=86 Identities=9% Similarity=0.143 Sum_probs=41.6
Q ss_pred eeccccccchhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 014232 342 MICRPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQLMVEKE-GQEMRQRAKNLKEDVELCIKESGSSSSSLNK 420 (428)
Q Consensus 342 ~v~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 420 (428)
|=..|+..|+..+...+..++.+-..+.--.|.+++..+-......++ ......-+++++..... -.-.|.....++.
T Consensus 134 MP~y~~L~~~~ld~~~~~~~~~~~~~~GVPYtd~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~tE~~A 212 (232)
T TIGR00781 134 MPAYKHLATKKVDVDTAYAEAKTQKKVGVPYDDEMIAKAGADEEAQKDPNADAKKLTADYKDKRVL-EAFDGGPLTEMDA 212 (232)
T ss_pred CCCCcccccccCCHHHHHHHHHHHHhcCCCCCHHHHHHhHHHHHhCCCccchhHHHHHHhhhhhhh-hcccCCCchHHHH
Confidence 444555566666554443333332222214677778777555544421 01122222222111110 0123445788999
Q ss_pred HHHHhhcC
Q 014232 421 FLEFFNLF 428 (428)
Q Consensus 421 ~~~~~~~~ 428 (428)
||.+|++|
T Consensus 213 LiAYLQ~L 220 (232)
T TIGR00781 213 LVAYLQSL 220 (232)
T ss_pred HHHHHHHh
Confidence 99999976
No 371
>PRK06131 dihydroxy-acid dehydratase; Validated
Probab=21.28 E-value=1.9e+02 Score=29.18 Aligned_cols=47 Identities=15% Similarity=0.105 Sum_probs=35.2
Q ss_pred chhHHHHHHHHHHccCCCCCceEEE----EcCchhhHHHHHHHcCCceEEEeccc
Q 014232 64 GAPFHKCLVQMMKQQMPADEIVCII----YDELMYFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 64 ~~~l~~~l~~l~~~~~~~~~~D~vI----~D~~~~~~~~~A~~lgiP~v~~~~~~ 114 (428)
++.+.+.++...+.. .+|.+| ||=..+.....|-+++||.|++...+
T Consensus 96 RelIAdsiE~~~~a~----~~Dg~v~i~~CDK~~PG~lMaa~rlniPsi~v~gGp 146 (571)
T PRK06131 96 RNLAAMDVEEMIRGY----PIDGVVLLGGCDKTTPALLMGAASVDLPAIVLSGGP 146 (571)
T ss_pred HHHHHHHHHHHHhcC----CcceEEEEeeCCCCcHHHHHHHHhcCCCEEEEeCCC
Confidence 344556666666654 788877 77767878888889999999997664
No 372
>PRK07092 benzoylformate decarboxylase; Reviewed
Probab=21.27 E-value=2.3e+02 Score=28.36 Aligned_cols=27 Identities=7% Similarity=0.076 Sum_probs=22.6
Q ss_pred cCceeeccccc------hhHHhhhcCCceeccc
Q 014232 320 VGGFWSHCGWN------STLESICEGVPMICRP 346 (428)
Q Consensus 320 ~~~~itHgG~~------s~~eal~~GvP~v~~P 346 (428)
.+++++|+|-| +++||...++|+|++-
T Consensus 74 ~~v~~vt~gpG~~N~~~gia~A~~~~~Pvl~i~ 106 (530)
T PRK07092 74 AAFVNLHSAAGVGNAMGNLFTAFKNHTPLVITA 106 (530)
T ss_pred ceEEEeccCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 34499998866 8999999999999883
No 373
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=21.21 E-value=1.4e+02 Score=29.08 Aligned_cols=26 Identities=19% Similarity=0.236 Sum_probs=21.6
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEe
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 111 (428)
++|++|.+.. ...+|+++|||++.+.
T Consensus 372 ~~dliiG~s~---~~~~a~~~~ip~~~~~ 397 (429)
T cd03466 372 KIDVLIGNSY---GRRIAEKLGIPLIRIG 397 (429)
T ss_pred CCCEEEECch---hHHHHHHcCCCEEEec
Confidence 7999999874 5789999999998654
No 374
>PRK04148 hypothetical protein; Provisional
Probab=21.11 E-value=98 Score=24.47 Aligned_cols=17 Identities=24% Similarity=0.540 Sum_probs=14.3
Q ss_pred HHHHHHHhCCCeEEEEe
Q 014232 3 QLGTILYSKGFSITVVH 19 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~ 19 (428)
.+|..|++.||+|+.+=
T Consensus 30 ~vA~~L~~~G~~ViaID 46 (134)
T PRK04148 30 KVAKKLKESGFDVIVID 46 (134)
T ss_pred HHHHHHHHCCCEEEEEE
Confidence 58999999999998553
No 375
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=21.09 E-value=1e+02 Score=29.88 Aligned_cols=26 Identities=4% Similarity=-0.173 Sum_probs=22.1
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEe
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 111 (428)
+||++|.... ...+|+++|||+..+.
T Consensus 369 ~pDliig~~~---~~~~a~k~giP~~~~~ 394 (421)
T cd01976 369 KPDLIGSGIK---EKYVFQKMGIPFRQMH 394 (421)
T ss_pred CCCEEEecCc---chhhhhhcCCCeEeCC
Confidence 7999998875 6678999999997665
No 376
>PRK00911 dihydroxy-acid dehydratase; Provisional
Probab=21.06 E-value=1.9e+02 Score=28.97 Aligned_cols=46 Identities=15% Similarity=0.109 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHHccCCCCCceEEE----EcCchhhHHHHHHHcCCceEEEeccc
Q 014232 65 APFHKCLVQMMKQQMPADEIVCII----YDELMYFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 65 ~~l~~~l~~l~~~~~~~~~~D~vI----~D~~~~~~~~~A~~lgiP~v~~~~~~ 114 (428)
+.+.+.++...+.. .+|-+| ||=..+.....|-+++||.|++...+
T Consensus 95 eliA~~iE~~~~a~----~~Dg~V~l~~CDK~~Pg~lMaaarlniPsi~v~gGp 144 (552)
T PRK00911 95 EVIADSIETVVNAH----WFDGLVAIPGCDKNMPGMLMAAARLNVPSIFVYGGP 144 (552)
T ss_pred HHHHHHHHHHhhCC----CcceEEEeccCCCCcHHHHHHHHhcCCCEEEEeCCC
Confidence 34556666666654 788887 67767878888899999999997664
No 377
>PRK12448 dihydroxy-acid dehydratase; Provisional
Probab=20.99 E-value=1.9e+02 Score=29.30 Aligned_cols=46 Identities=11% Similarity=0.093 Sum_probs=34.6
Q ss_pred hhHHHHHHHHHHccCCCCCceEEE----EcCchhhHHHHHHHcCCceEEEeccc
Q 014232 65 APFHKCLVQMMKQQMPADEIVCII----YDELMYFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 65 ~~l~~~l~~l~~~~~~~~~~D~vI----~D~~~~~~~~~A~~lgiP~v~~~~~~ 114 (428)
+.+.+.++...+.. .+|-+| ||=..+.....|-+++||.|++...+
T Consensus 97 elIAdsiE~~~~a~----~~Dg~V~i~~CDK~~PG~lMaaarlniPsi~v~gGp 146 (615)
T PRK12448 97 ELIADSVEYMVNAH----CADAMVCISNCDKITPGMLMAALRLNIPVVFVSGGP 146 (615)
T ss_pred HHHHHHHHHHhhCC----CcceEEEeccCCCchHHHHHHHHhcCCCEEEEeCCC
Confidence 34556666666654 789877 67767878888899999999987664
No 378
>TIGR00110 ilvD dihydroxy-acid dehydratase. This model generates scores of up to 150 bits vs. 6-phosphogluconate dehydratase, a homologous enzyme.
Probab=20.95 E-value=1.9e+02 Score=28.83 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHHccCCCCCceEEE----EcCchhhHHHHHHHcCCceEEEeccc
Q 014232 65 APFHKCLVQMMKQQMPADEIVCII----YDELMYFAESAANQLKLRSIILRTNS 114 (428)
Q Consensus 65 ~~l~~~l~~l~~~~~~~~~~D~vI----~D~~~~~~~~~A~~lgiP~v~~~~~~ 114 (428)
+.+.+.++...+.. .+|.+| ||=..+.....|-+++||.|++...+
T Consensus 75 elIAdsiE~~~~~~----~~Dg~v~l~~CDK~~PG~lMaaarlniP~i~v~gGp 124 (535)
T TIGR00110 75 EIIADSVETMVNAH----RFDGLVCIPSCDKITPGMLMAAARLNIPSIFVTGGP 124 (535)
T ss_pred HHHHHHHHHHHhcC----CcceEEEeccCCCCcHHHHHHHHhcCCCEEEEeCCC
Confidence 44556666666554 788877 77767888888899999999987654
No 379
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=20.93 E-value=2.4e+02 Score=28.64 Aligned_cols=28 Identities=11% Similarity=0.248 Sum_probs=22.9
Q ss_pred CcCceeeccccc------hhHHhhhcCCceeccc
Q 014232 319 AVGGFWSHCGWN------STLESICEGVPMICRP 346 (428)
Q Consensus 319 ~~~~~itHgG~~------s~~eal~~GvP~v~~P 346 (428)
+.+++++|.|-| +++||...++|+|++-
T Consensus 78 ~~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 78 KPGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 344599999865 6889999999999983
No 380
>PRK10239 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase; Provisional
Probab=20.87 E-value=2e+02 Score=23.59 Aligned_cols=27 Identities=19% Similarity=0.282 Sum_probs=20.6
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhC
Q 014232 243 VLYVSLGSIVSMDKKELKEMAWGLYNS 269 (428)
Q Consensus 243 vv~vsfGS~~~~~~~~~~~~~~al~~~ 269 (428)
.||+++||....+...++..++.|+..
T Consensus 3 ~v~i~lGSN~g~~~~~l~~A~~~L~~~ 29 (159)
T PRK10239 3 VAYIAIGSNLASPLEQVNAALKALGDI 29 (159)
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcC
Confidence 599999999865666677777777664
No 381
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=20.83 E-value=3.9e+02 Score=25.11 Aligned_cols=78 Identities=8% Similarity=0.034 Sum_probs=48.5
Q ss_pred eecChHhhhccCCcCceee------ccccchhHHhhhcCCceec-cccccchhhhHHHHhhhheeEEEcCCccCHHHHHH
Q 014232 307 KWAPQKDVLSHIAVGGFWS------HCGWNSTLESICEGVPMIC-RPGFGDQRVSARYVSHVWRIGLQLENDLEKGEVEK 379 (428)
Q Consensus 307 ~~~pq~~iL~~~~~~~~it------HgG~~s~~eal~~GvP~v~-~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~l~~ 379 (428)
-|-...++|...++-++.+ +-+.--+.+||.+|+.+++ =|+..++-.-..+++++.|+=+.+.. +. .-..
T Consensus 52 ~y~~~eell~d~Di~~V~ipt~~P~~~H~e~a~~aL~aGkHVL~EKPla~~Ea~el~~~A~~~g~~l~v~~-f~--p~~~ 128 (343)
T TIGR01761 52 LYCEVEELPDDIDIACVVVRSAIVGGQGSALARALLARGIHVLQEHPLHPRDIQDLLRLAERQGRRYLVNT-FY--PHLP 128 (343)
T ss_pred ccCCHHHHhcCCCEEEEEeCCCCCCccHHHHHHHHHhCCCeEEEcCCCCHHHHHHHHHHHHHcCCEEEEEe-cC--HHHH
Confidence 4677788888788766664 2345678889999999998 88876555555444444354444332 22 2234
Q ss_pred HHHHHhcC
Q 014232 380 AVKQLMVE 387 (428)
Q Consensus 380 ai~~vl~~ 387 (428)
++++++++
T Consensus 129 ~vr~~i~~ 136 (343)
T TIGR01761 129 AVRRFIEY 136 (343)
T ss_pred HHHHHHHc
Confidence 55555554
No 382
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=20.82 E-value=4e+02 Score=26.43 Aligned_cols=115 Identities=16% Similarity=0.113 Sum_probs=69.0
Q ss_pred HhhCCCceEEeecChH---hhhccCCcCceee-----ccccchhHHhhhcCCceecccccc------chhhhHHHHhhhh
Q 014232 297 EAVGENGCVVKWAPQK---DVLSHIAVGGFWS-----HCGWNSTLESICEGVPMICRPGFG------DQRVSARYVSHVW 362 (428)
Q Consensus 297 ~~~~~~~~v~~~~pq~---~iL~~~~~~~~it-----HgG~~s~~eal~~GvP~v~~P~~~------DQ~~na~~v~~~~ 362 (428)
++.+.++.+.-|.... .+++-+++ |+- -||. |-++|+.+|.+-|+.+..+ |-..+. +.. -
T Consensus 345 ~~~~~~~~~~i~~~~~la~~i~agaD~--~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~-~ 418 (487)
T COG0297 345 SRHPGRVLVVIGYDEPLAHLIYAGADV--ILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQG-V 418 (487)
T ss_pred HhcCceEEEEeeecHHHHHHHHhcCCE--EEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchh--ccC-c
Confidence 3445566666665533 35555665 554 3665 5678999999888888764 333333 334 4
Q ss_pred eeEEEcCCccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 014232 363 RIGLQLENDLEKGEVEKAVKQLMVEKEGQEMRQRAKNLKEDVELCIKESGSSSSSLNKFLE 423 (428)
Q Consensus 363 g~g~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 423 (428)
|.|..+... +++.+..++++.+. -|+.....++.....++...=+-...+.+.++
T Consensus 419 gtGf~f~~~-~~~~l~~al~rA~~-----~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~ 473 (487)
T COG0297 419 GTGFLFLQT-NPDHLANALRRALV-----LYRAPPLLWRKVQPNAMGADFSWDLSAKEYVE 473 (487)
T ss_pred eeEEEEecC-CHHHHHHHHHHHHH-----HhhCCHHHHHHHHHhhcccccCchhHHHHHHH
Confidence 888888864 99999999987763 24443333455555444434444444444443
No 383
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=20.80 E-value=2.1e+02 Score=24.33 Aligned_cols=106 Identities=9% Similarity=0.064 Sum_probs=64.8
Q ss_pred CHHHH-HHHHHHHHhCCCCeEEEEcCCCCCCCccccCCchhHHHhhCCCceEEeecChHhhh-ccCCcCceeeccccchh
Q 014232 255 DKKEL-KEMAWGLYNSKQPFLWVLRPSSTSASSGIELLPEGFEEAVGENGCVVKWAPQKDVL-SHIAVGGFWSHCGWNST 332 (428)
Q Consensus 255 ~~~~~-~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~~~pq~~iL-~~~~~~~~itHgG~~s~ 332 (428)
+.+.+ .++.+.+...+..++...|.- .-|.+.|.++... .|| =||++ .=.++|..+.
T Consensus 63 ~r~~~d~~l~~~l~~~~~dlvvLAGyM--------rIL~~~fl~~~~g-----------rIlNIHPSL--LP~f~G~h~~ 121 (200)
T COG0299 63 SREAFDRALVEALDEYGPDLVVLAGYM--------RILGPEFLSRFEG-----------RILNIHPSL--LPAFPGLHAH 121 (200)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcchH--------HHcCHHHHHHhhc-----------ceEecCccc--ccCCCCchHH
Confidence 34444 558999999888877665542 2255555433322 233 38888 8899999999
Q ss_pred HHhhhcCCceecccccc-c-hhhhHHHHhhhheeEEEcCCccCHHHHHHHHHHH
Q 014232 333 LESICEGVPMICRPGFG-D-QRVSARYVSHVWRIGLQLENDLEKGEVEKAVKQL 384 (428)
Q Consensus 333 ~eal~~GvP~v~~P~~~-D-Q~~na~~v~~~~g~g~~l~~~~~~~~l~~ai~~v 384 (428)
.+|+.+|+..-++-++. | .-+-+--+.+ ..+.+...=|.|+|.+.|.+.
T Consensus 122 ~~A~~aG~k~sG~TVH~V~e~vD~GpII~Q---~~Vpv~~~Dt~etl~~RV~~~ 172 (200)
T COG0299 122 EQALEAGVKVSGCTVHFVTEGVDTGPIIAQ---AAVPVLPGDTAETLEARVLEQ 172 (200)
T ss_pred HHHHHcCCCccCcEEEEEccCCCCCCeEEE---EeeeecCCCCHHHHHHHHHHH
Confidence 99999999987766543 2 2222222211 222232334788888777653
No 384
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=20.77 E-value=79 Score=31.06 Aligned_cols=21 Identities=19% Similarity=0.241 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCeEEEEeCCC
Q 014232 2 LQLGTILYSKGFSITVVHTDF 22 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~~ 22 (428)
|+-|.+|+++||+||++-...
T Consensus 13 L~~a~~La~~g~~vt~~ea~~ 33 (485)
T COG3349 13 LAAAYELADAGYDVTLYEARD 33 (485)
T ss_pred HHHHHHHHhCCCceEEEeccC
Confidence 466899999999999987663
No 385
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=20.67 E-value=2.4e+02 Score=26.75 Aligned_cols=31 Identities=13% Similarity=-0.044 Sum_probs=22.9
Q ss_pred CceEEEEcC--ch-hhHHHHHHHcCCceEEEecc
Q 014232 83 EIVCIIYDE--LM-YFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 83 ~~D~vI~D~--~~-~~~~~~A~~lgiP~v~~~~~ 113 (428)
+||+|++.. .. .++..+|.+++||+.-+-..
T Consensus 92 kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAG 125 (383)
T COG0381 92 KPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAG 125 (383)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHhCCceEEEecc
Confidence 899998544 33 45578888999999877543
No 386
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=20.63 E-value=1.4e+02 Score=28.98 Aligned_cols=26 Identities=12% Similarity=0.093 Sum_probs=21.9
Q ss_pred CceEEEEcCchhhHHHHHHHcCCceEEEe
Q 014232 83 EIVCIIYDELMYFAESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 111 (428)
+||+||.+.. ...+|+++|+|++.+.
T Consensus 371 ~pdliig~~~---~~~~a~~~~ip~i~~~ 396 (428)
T cd01965 371 PVDLLIGNSH---GRYLARDLGIPLVRVG 396 (428)
T ss_pred CCCEEEECch---hHHHHHhcCCCEEEec
Confidence 7999999974 5788999999998654
No 387
>PRK11914 diacylglycerol kinase; Reviewed
Probab=20.58 E-value=5.5e+02 Score=23.43 Aligned_cols=28 Identities=11% Similarity=0.099 Sum_probs=22.4
Q ss_pred CCcCceeeccccchhHHhh----hcCCceecccc
Q 014232 318 IAVGGFWSHCGWNSTLESI----CEGVPMICRPG 347 (428)
Q Consensus 318 ~~~~~~itHgG~~s~~eal----~~GvP~v~~P~ 347 (428)
.++ +|--||=||+.|++ ..++|+-++|.
T Consensus 65 ~d~--vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 65 TDA--LVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred CCE--EEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 455 89999999988886 34789999996
No 388
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=20.52 E-value=4.2e+02 Score=24.04 Aligned_cols=22 Identities=18% Similarity=0.365 Sum_probs=18.2
Q ss_pred HHHHHHHhCCCeEEEEeCCCCC
Q 014232 3 QLGTILYSKGFSITVVHTDFNS 24 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~~~~ 24 (428)
-+|+.|.++||.|.++.-+.+.
T Consensus 17 s~a~~l~~~g~~v~i~g~d~~~ 38 (279)
T COG0287 17 SLARALKEAGLVVRIIGRDRSA 38 (279)
T ss_pred HHHHHHHHcCCeEEEEeecCcH
Confidence 3789999999999988877554
No 389
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=20.51 E-value=3e+02 Score=26.17 Aligned_cols=18 Identities=11% Similarity=0.440 Sum_probs=15.3
Q ss_pred HHHHHHHhCCCeEEEEeC
Q 014232 3 QLGTILYSKGFSITVVHT 20 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~ 20 (428)
.+|+.|.++||+|+++..
T Consensus 113 slA~~l~~~G~~V~~~d~ 130 (374)
T PRK11199 113 LFAKMLTLSGYQVRILEQ 130 (374)
T ss_pred HHHHHHHHCCCeEEEeCC
Confidence 478999999999998764
No 390
>PRK14099 glycogen synthase; Provisional
Probab=20.38 E-value=84 Score=31.14 Aligned_cols=19 Identities=16% Similarity=0.272 Sum_probs=17.1
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
+|.++|+++||+|.++.|.
T Consensus 28 ~lp~~l~~~g~~v~v~~P~ 46 (485)
T PRK14099 28 ALPAALKAHGVEVRTLVPG 46 (485)
T ss_pred HHHHHHHHCCCcEEEEeCC
Confidence 6899999999999988875
No 391
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=20.37 E-value=1.4e+02 Score=28.61 Aligned_cols=29 Identities=10% Similarity=0.087 Sum_probs=21.1
Q ss_pred CceEEEEcCchh-------hH---HHHHHHcCCceEEEe
Q 014232 83 EIVCIIYDELMY-------FA---ESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI~D~~~~-------~~---~~~A~~lgiP~v~~~ 111 (428)
+||++|+-+.+. |+ ..+.++++||.+.-.
T Consensus 76 ~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~M 114 (431)
T TIGR01918 76 EPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTSM 114 (431)
T ss_pred CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 899999998652 22 124667999998855
No 392
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=20.30 E-value=89 Score=27.24 Aligned_cols=20 Identities=15% Similarity=0.355 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 014232 2 LQLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 2 l~La~~L~~rGh~Vt~~~~~ 21 (428)
..||+.|.+.||+|+.+-..
T Consensus 13 ~~va~~L~~~g~~Vv~Id~d 32 (225)
T COG0569 13 RSVARELSEEGHNVVLIDRD 32 (225)
T ss_pred HHHHHHHHhCCCceEEEEcC
Confidence 36899999999999977655
No 393
>PF09884 DUF2111: Uncharacterized protein conserved in archaea (DUF2111); InterPro: IPR012029 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, members of PIRSF036667 from PIRSF possess a domain homologous to these proteins fused within a signal transduction sensor protein containing PAS/PAC and GAF domains. Therefore, it is possible that members of this family are involved in signal transduction (possibly as a sensor).
Probab=20.18 E-value=35 Score=24.13 Aligned_cols=20 Identities=30% Similarity=0.529 Sum_probs=16.0
Q ss_pred hhHHhhhcCCceeccccccc
Q 014232 331 STLESICEGVPMICRPGFGD 350 (428)
Q Consensus 331 s~~eal~~GvP~v~~P~~~D 350 (428)
+-.+.-|.|+|+++.|+..+
T Consensus 50 ~P~~G~Y~G~PViV~PI~~~ 69 (84)
T PF09884_consen 50 TPIEGPYKGVPVIVAPIKDE 69 (84)
T ss_pred ccCCcccCCeeEEEEEEEcC
Confidence 34556899999999998754
No 394
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=20.17 E-value=1.1e+02 Score=26.36 Aligned_cols=19 Identities=16% Similarity=0.214 Sum_probs=16.4
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 014232 3 QLGTILYSKGFSITVVHTD 21 (428)
Q Consensus 3 ~La~~L~~rGh~Vt~~~~~ 21 (428)
.||++|++.||+|++.+..
T Consensus 15 alA~~~a~ag~eV~igs~r 33 (211)
T COG2085 15 ALALRLAKAGHEVIIGSSR 33 (211)
T ss_pred HHHHHHHhCCCeEEEecCC
Confidence 6899999999999977555
No 395
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=20.16 E-value=1.4e+02 Score=28.59 Aligned_cols=29 Identities=7% Similarity=0.083 Sum_probs=21.1
Q ss_pred CceEEEEcCchh-------hH---HHHHHHcCCceEEEe
Q 014232 83 EIVCIIYDELMY-------FA---ESAANQLKLRSIILR 111 (428)
Q Consensus 83 ~~D~vI~D~~~~-------~~---~~~A~~lgiP~v~~~ 111 (428)
+||++|+-+.+. |+ ..+.++++||.+.-.
T Consensus 76 ~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vtaM 114 (431)
T TIGR01917 76 NPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTAM 114 (431)
T ss_pred CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 899999998652 22 124567999998855
No 396
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=20.13 E-value=1.7e+02 Score=29.30 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=31.0
Q ss_pred HHHHHHHHHHccCCCCCceEEEEcCchhhHHHHHHHcCCceEEEecc
Q 014232 67 FHKCLVQMMKQQMPADEIVCIIYDELMYFAESAANQLKLRSIILRTN 113 (428)
Q Consensus 67 l~~~l~~l~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 113 (428)
....++++.+. ++++||.|.. +..+|+++|++.|.+.+.
T Consensus 134 ~~~~~~~l~~~-----G~~~viG~~~---~~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 134 ARSCVNDLRAR-----GIGAVVGAGL---ITDLAEQAGLHGVFLYSA 172 (526)
T ss_pred HHHHHHHHHHC-----CCCEEECChH---HHHHHHHcCCceEEEecH
Confidence 44566666654 7999999974 578999999999998775
Done!