Query 014237
Match_columns 428
No_of_seqs 212 out of 1056
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 07:57:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014237.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014237hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w5q_A Delta-aminolevulinic ac 100.0 2E-162 6E-167 1192.1 33.1 331 92-425 2-335 (337)
2 1w1z_A Delta-aminolevulinic ac 100.0 4E-161 1E-165 1179.3 31.4 325 96-424 3-328 (328)
3 3obk_A Delta-aminolevulinic ac 100.0 6E-161 2E-165 1186.9 31.5 333 89-425 9-343 (356)
4 1l6s_A Porphobilinogen synthas 100.0 1E-158 5E-163 1159.5 33.1 319 101-424 2-321 (323)
5 1h7n_A 5-aminolaevulinic acid 100.0 1E-156 3E-161 1154.0 34.5 327 99-426 11-341 (342)
6 1pv8_A Delta-aminolevulinic ac 100.0 3E-156 1E-160 1146.4 29.9 323 101-425 2-329 (330)
7 3ajx_A 3-hexulose-6-phosphate 96.4 0.084 2.9E-06 46.6 14.4 162 158-412 14-184 (207)
8 1qop_A Tryptophan synthase alp 96.4 0.13 4.4E-06 48.4 16.3 172 158-413 32-233 (268)
9 1y0e_A Putative N-acetylmannos 95.5 0.81 2.8E-05 40.7 16.5 159 158-413 24-203 (223)
10 1rd5_A Tryptophan synthase alp 95.4 0.5 1.7E-05 43.7 15.3 178 158-417 33-235 (262)
11 1wbh_A KHG/KDPG aldolase; lyas 95.3 0.21 7.3E-06 46.0 12.5 151 158-412 29-183 (214)
12 1vhc_A Putative KHG/KDPG aldol 95.2 0.4 1.4E-05 44.6 14.0 150 158-412 30-184 (224)
13 1mxs_A KDPG aldolase; 2-keto-3 95.1 0.18 6.1E-06 47.0 11.5 151 158-412 39-193 (225)
14 1wa3_A 2-keto-3-deoxy-6-phosph 95.0 0.22 7.6E-06 43.9 11.1 154 154-412 20-176 (205)
15 3f4w_A Putative hexulose 6 pho 94.9 0.12 4.1E-06 45.8 9.3 136 201-413 42-186 (211)
16 3nav_A Tryptophan synthase alp 94.6 1.8 6.2E-05 41.6 17.1 103 158-291 35-157 (271)
17 2ekc_A AQ_1548, tryptophan syn 94.5 0.73 2.5E-05 43.3 14.0 151 158-371 32-211 (262)
18 2qiw_A PEP phosphonomutase; st 94.2 0.31 1.1E-05 46.5 10.8 167 146-370 23-208 (255)
19 3eol_A Isocitrate lyase; seatt 94.2 0.39 1.3E-05 49.5 12.2 150 250-413 164-346 (433)
20 3lye_A Oxaloacetate acetyl hyd 94.0 0.65 2.2E-05 45.7 12.9 155 166-374 41-223 (307)
21 4e38_A Keto-hydroxyglutarate-a 93.9 1.2 4.3E-05 42.0 14.2 151 158-412 47-200 (232)
22 2yzr_A Pyridoxal biosynthesis 93.9 0.41 1.4E-05 47.8 11.3 89 249-350 27-149 (330)
23 2yw3_A 4-hydroxy-2-oxoglutarat 93.8 1.2 4E-05 40.6 13.4 149 158-412 26-177 (207)
24 2ze3_A DFA0005; organic waste 93.3 1 3.4E-05 43.5 12.7 173 147-375 20-212 (275)
25 3fa4_A 2,3-dimethylmalate lyas 93.2 0.89 3E-05 44.7 12.4 189 166-408 34-262 (302)
26 3lg3_A Isocitrate lyase; conse 93.1 0.66 2.3E-05 47.9 11.8 149 250-412 171-350 (435)
27 3q58_A N-acetylmannosamine-6-p 92.5 0.34 1.2E-05 45.1 7.9 172 158-424 37-224 (229)
28 1f8m_A Isocitrate lyase, ICL; 92.4 0.55 1.9E-05 48.4 10.1 122 250-380 167-321 (429)
29 3i4e_A Isocitrate lyase; struc 92.4 0.65 2.2E-05 48.0 10.5 121 250-379 171-324 (439)
30 1vzw_A Phosphoribosyl isomeras 92.1 0.52 1.8E-05 42.7 8.4 51 316-371 23-80 (244)
31 3vnd_A TSA, tryptophan synthas 91.9 5.6 0.00019 38.0 15.8 103 158-291 33-155 (267)
32 3igs_A N-acetylmannosamine-6-p 91.8 0.48 1.6E-05 44.1 8.0 161 158-413 37-209 (232)
33 1s2w_A Phosphoenolpyruvate pho 91.7 1.8 6.1E-05 42.1 12.2 165 147-371 23-214 (295)
34 2w6r_A Imidazole glycerol phos 91.6 6.7 0.00023 35.7 15.4 172 147-371 22-205 (266)
35 1o66_A 3-methyl-2-oxobutanoate 91.6 2.5 8.6E-05 41.2 13.1 165 147-343 85-255 (275)
36 2v82_A 2-dehydro-3-deoxy-6-pho 91.0 0.8 2.7E-05 40.7 8.4 137 244-412 17-174 (212)
37 1vzw_A Phosphoribosyl isomeras 90.9 4.7 0.00016 36.3 13.5 177 159-412 34-220 (244)
38 1zlp_A PSR132, petal death pro 90.8 3 0.0001 41.2 12.9 166 147-374 43-233 (318)
39 1lt8_A Betaine-homocysteine me 90.7 1.4 4.9E-05 44.7 10.9 224 159-424 55-315 (406)
40 3lab_A Putative KDPG (2-keto-3 90.7 5.1 0.00017 37.7 13.9 154 158-412 26-185 (217)
41 1to3_A Putative aldolase YIHT; 90.5 0.67 2.3E-05 44.9 7.9 118 257-413 119-253 (304)
42 3jr2_A Hexulose-6-phosphate sy 90.2 1.8 6.2E-05 39.0 10.0 61 201-284 48-109 (218)
43 1geq_A Tryptophan synthase alp 89.7 2.6 8.9E-05 38.1 10.7 107 252-413 101-219 (248)
44 2hjp_A Phosphonopyruvate hydro 89.1 2.5 8.4E-05 41.1 10.7 203 146-407 18-257 (290)
45 3na8_A Putative dihydrodipicol 89.0 2.9 9.8E-05 40.5 11.0 135 195-376 11-160 (315)
46 3si9_A DHDPS, dihydrodipicolin 88.6 3 0.0001 40.5 10.9 110 234-377 35-159 (315)
47 2y88_A Phosphoribosyl isomeras 88.5 5.1 0.00017 35.9 11.7 182 158-412 32-223 (244)
48 3cpr_A Dihydrodipicolinate syn 88.1 4.5 0.00015 38.8 11.7 108 235-376 30-152 (304)
49 3eoo_A Methylisocitrate lyase; 88.1 1.2 4.3E-05 43.5 7.9 156 166-374 38-215 (298)
50 2y88_A Phosphoribosyl isomeras 88.0 0.7 2.4E-05 41.6 5.7 51 316-371 22-79 (244)
51 1oy0_A Ketopantoate hydroxymet 88.0 3.3 0.00011 40.4 10.7 165 147-343 102-273 (281)
52 1o66_A 3-methyl-2-oxobutanoate 87.9 5.4 0.00018 38.9 12.1 172 146-372 20-202 (275)
53 3ih1_A Methylisocitrate lyase; 87.8 1.7 5.9E-05 42.6 8.7 165 147-374 33-219 (305)
54 1rpx_A Protein (ribulose-phosp 87.7 5.2 0.00018 35.9 11.2 44 158-210 24-67 (230)
55 2nv1_A Pyridoxal biosynthesis 87.6 0.92 3.2E-05 43.2 6.5 43 324-370 131-211 (305)
56 1m3u_A 3-methyl-2-oxobutanoate 87.0 4.8 0.00016 39.0 11.1 165 147-343 85-255 (264)
57 2wkj_A N-acetylneuraminate lya 86.7 4 0.00014 39.2 10.4 109 234-376 24-148 (303)
58 1xg4_A Probable methylisocitra 86.1 2.8 9.7E-05 40.8 9.1 166 147-371 21-208 (295)
59 3bg3_A Pyruvate carboxylase, m 86.1 11 0.00037 41.0 14.5 195 132-374 102-312 (718)
60 3eul_A Possible nitrate/nitrit 85.4 6.6 0.00022 31.4 9.6 91 327-425 49-149 (152)
61 1zlp_A PSR132, petal death pro 85.4 5.7 0.00019 39.2 10.9 115 147-292 108-230 (318)
62 1ujp_A Tryptophan synthase alp 85.3 1 3.6E-05 42.9 5.5 77 333-412 33-149 (271)
63 1q7z_A 5-methyltetrahydrofolat 85.1 9.8 0.00033 40.0 13.2 257 133-425 15-289 (566)
64 1vqt_A Orotidine 5'-phosphate 85.1 1.3 4.4E-05 40.8 5.8 151 189-412 40-190 (213)
65 2gou_A Oxidoreductase, FMN-bin 85.1 27 0.00094 34.3 15.7 33 339-371 260-298 (365)
66 1yxy_A Putative N-acetylmannos 84.9 11 0.00038 33.7 11.9 68 159-263 90-157 (234)
67 3nav_A Tryptophan synthase alp 84.9 4.2 0.00014 39.0 9.5 111 266-411 1-154 (271)
68 1oy0_A Ketopantoate hydroxymet 84.2 2.9 9.9E-05 40.8 8.1 141 252-413 47-198 (281)
69 3ctl_A D-allulose-6-phosphate 83.9 5.3 0.00018 37.2 9.5 48 322-373 9-64 (231)
70 3ih1_A Methylisocitrate lyase; 83.6 4.8 0.00016 39.5 9.5 102 158-280 105-210 (305)
71 3b8i_A PA4872 oxaloacetate dec 83.6 4.8 0.00016 39.1 9.4 164 146-370 24-208 (287)
72 1kbi_A Cytochrome B2, L-LCR; f 83.6 6.9 0.00024 40.6 11.1 39 355-413 332-370 (511)
73 3o07_A Pyridoxine biosynthesis 83.4 1.2 4E-05 44.1 5.0 44 324-371 121-203 (291)
74 3ctl_A D-allulose-6-phosphate 83.3 0.38 1.3E-05 44.9 1.5 129 256-414 22-195 (231)
75 3vav_A 3-methyl-2-oxobutanoate 83.1 2.7 9.2E-05 40.9 7.4 134 252-413 42-192 (275)
76 3vav_A 3-methyl-2-oxobutanoate 82.9 11 0.00037 36.7 11.5 165 147-343 97-267 (275)
77 3jr2_A Hexulose-6-phosphate sy 82.8 5.1 0.00018 36.0 8.7 86 322-411 12-113 (218)
78 3f6p_A Transcriptional regulat 82.7 5.9 0.0002 30.6 8.0 62 327-391 34-98 (120)
79 2gzm_A Glutamate racemase; enz 82.5 11 0.00036 35.3 11.0 29 384-412 150-181 (267)
80 2dgd_A 223AA long hypothetical 82.4 1.4 4.8E-05 39.6 4.8 44 330-373 156-203 (223)
81 1q7z_A 5-methyltetrahydrofolat 81.6 3.5 0.00012 43.4 8.1 165 243-416 249-440 (566)
82 3tr9_A Dihydropteroate synthas 81.3 3.4 0.00012 40.9 7.5 98 309-415 34-156 (314)
83 1ujp_A Tryptophan synthase alp 81.0 5.1 0.00017 38.2 8.4 86 252-371 112-207 (271)
84 2jfz_A Glutamate racemase; cel 80.8 6.8 0.00023 36.3 9.0 51 202-264 15-67 (255)
85 3i10_A Putative glycerophospho 80.5 6.7 0.00023 37.4 9.1 66 353-427 206-275 (278)
86 1mzh_A Deoxyribose-phosphate a 80.5 4.3 0.00015 37.2 7.5 67 339-424 142-214 (225)
87 2qjg_A Putative aldolase MJ040 80.2 6.1 0.00021 36.3 8.4 71 324-413 164-236 (273)
88 1xg4_A Probable methylisocitra 79.9 13 0.00044 36.2 10.9 109 151-281 89-203 (295)
89 2vp8_A Dihydropteroate synthas 79.7 2.7 9.1E-05 41.6 6.1 97 309-415 48-168 (318)
90 2jfq_A Glutamate racemase; cel 79.4 5.6 0.00019 37.8 8.1 29 384-412 169-201 (286)
91 1zuw_A Glutamate racemase 1; ( 79.4 13 0.00044 35.0 10.5 29 384-412 151-182 (272)
92 1tx2_A DHPS, dihydropteroate s 79.2 6 0.00021 38.6 8.4 101 309-415 46-167 (297)
93 3hgj_A Chromate reductase; TIM 79.1 12 0.0004 36.5 10.5 96 158-267 153-260 (349)
94 3gka_A N-ethylmaleimide reduct 78.8 3.8 0.00013 40.7 6.9 181 158-393 162-355 (361)
95 1p0k_A Isopentenyl-diphosphate 78.5 8.1 0.00028 37.2 9.0 56 341-413 139-208 (349)
96 2hjp_A Phosphonopyruvate hydro 78.5 16 0.00054 35.5 11.0 121 147-291 82-209 (290)
97 1qop_A Tryptophan synthase alp 78.1 4.9 0.00017 37.6 7.1 71 340-412 42-152 (268)
98 2qf7_A Pyruvate carboxylase pr 77.7 45 0.0015 38.0 15.9 194 132-374 550-759 (1165)
99 1h1y_A D-ribulose-5-phosphate 77.6 2.6 9E-05 38.2 5.0 70 320-413 117-200 (228)
100 3lye_A Oxaloacetate acetyl hyd 77.3 17 0.00057 35.7 10.9 103 158-281 104-214 (307)
101 1w8s_A FBP aldolase, fructose- 76.6 25 0.00086 33.0 11.6 113 257-413 103-230 (263)
102 2zbt_A Pyridoxal biosynthesis 76.3 4.1 0.00014 38.3 6.1 65 326-412 133-236 (297)
103 2pln_A HP1043, response regula 76.2 9.9 0.00034 29.7 7.5 60 327-390 50-110 (137)
104 1ps9_A 2,4-dienoyl-COA reducta 76.1 31 0.0011 35.8 13.2 43 329-371 228-285 (671)
105 2yr1_A 3-dehydroquinate dehydr 75.8 6 0.00021 37.4 7.1 92 325-416 28-148 (257)
106 2yci_X 5-methyltetrahydrofolat 75.0 20 0.00067 34.3 10.5 87 327-415 32-133 (271)
107 2ze3_A DFA0005; organic waste 74.7 27 0.00092 33.6 11.4 117 147-281 83-204 (275)
108 2ekc_A AQ_1548, tryptophan syn 74.7 8.3 0.00028 36.1 7.7 70 339-411 41-151 (262)
109 3ixl_A Amdase, arylmalonate de 74.2 10 0.00036 35.1 8.2 120 248-371 55-210 (240)
110 3gl9_A Response regulator; bet 73.7 16 0.00054 28.3 8.0 62 327-391 34-101 (122)
111 1thf_D HISF protein; thermophI 73.6 3.3 0.00011 37.3 4.6 33 339-371 40-79 (253)
112 3eoo_A Methylisocitrate lyase; 73.4 33 0.0011 33.5 11.8 102 158-280 99-206 (298)
113 3eod_A Protein HNR; response r 73.3 12 0.0004 28.9 7.1 59 327-388 39-101 (130)
114 3ffs_A Inosine-5-monophosphate 73.3 5.5 0.00019 40.3 6.5 55 339-413 153-211 (400)
115 3cg0_A Response regulator rece 73.1 15 0.00051 28.5 7.7 63 326-391 41-107 (140)
116 3ru6_A Orotidine 5'-phosphate 73.0 2.9 0.0001 41.1 4.3 47 322-371 30-81 (303)
117 3s1x_A Probable transaldolase; 72.9 3 0.0001 39.5 4.2 70 247-351 113-190 (223)
118 1m3u_A 3-methyl-2-oxobutanoate 72.6 50 0.0017 31.8 12.7 170 146-372 20-202 (264)
119 3m47_A Orotidine 5'-phosphate 72.6 23 0.00079 32.6 10.1 117 201-366 54-172 (228)
120 1qo2_A Molecule: N-((5-phospho 72.3 5.6 0.00019 35.9 5.8 52 316-371 20-78 (241)
121 3f4w_A Putative hexulose 6 pho 72.3 22 0.00075 31.1 9.5 89 323-412 7-108 (211)
122 1vyr_A Pentaerythritol tetrani 72.1 78 0.0027 31.0 16.6 33 339-371 261-299 (364)
123 1mzh_A Deoxyribose-phosphate a 72.0 14 0.00049 33.7 8.5 137 221-415 4-153 (225)
124 1rqb_A Transcarboxylase 5S sub 71.6 1.1E+02 0.0036 32.4 17.2 188 132-374 24-227 (539)
125 2a9o_A Response regulator; ess 71.6 16 0.00056 27.3 7.5 62 327-391 33-97 (120)
126 1tmy_A CHEY protein, TMY; chem 71.5 16 0.00055 27.6 7.4 63 326-391 34-100 (120)
127 1f76_A Dihydroorotate dehydrog 71.4 12 0.0004 35.8 8.0 71 328-412 151-243 (336)
128 3d0c_A Dihydrodipicolinate syn 71.2 6.6 0.00023 37.9 6.3 107 235-376 26-147 (314)
129 3jte_A Response regulator rece 71.2 35 0.0012 26.6 10.1 64 327-391 35-102 (143)
130 1k66_A Phytochrome response re 71.1 34 0.0011 26.5 9.4 65 327-391 40-117 (149)
131 3heb_A Response regulator rece 71.1 36 0.0012 27.0 9.8 65 327-391 38-114 (152)
132 2nx9_A Oxaloacetate decarboxyl 70.5 15 0.00052 37.8 9.1 125 147-303 91-226 (464)
133 1yad_A Regulatory protein TENI 70.4 8.5 0.00029 34.3 6.4 54 339-412 127-190 (221)
134 3b8i_A PA4872 oxaloacetate dec 70.4 21 0.00073 34.6 9.7 109 147-280 89-203 (287)
135 2czd_A Orotidine 5'-phosphate 70.2 1.8 6.2E-05 38.7 2.0 72 323-411 6-82 (208)
136 1ka9_F Imidazole glycerol phos 70.2 10 0.00035 34.1 7.0 42 327-371 32-80 (252)
137 3hdg_A Uncharacterized protein 70.1 24 0.00082 27.3 8.3 60 327-389 39-102 (137)
138 1srr_A SPO0F, sporulation resp 70.0 15 0.0005 28.1 7.0 62 327-391 35-100 (124)
139 4fxs_A Inosine-5'-monophosphat 69.8 5.7 0.00019 40.8 5.8 54 339-412 240-298 (496)
140 2qzj_A Two-component response 69.8 17 0.0006 28.6 7.6 62 327-391 36-100 (136)
141 3crn_A Response regulator rece 69.5 20 0.0007 27.8 7.8 62 327-391 35-100 (132)
142 3t6k_A Response regulator rece 69.4 20 0.00068 28.2 7.8 62 327-391 36-103 (136)
143 4e7p_A Response regulator; DNA 69.4 36 0.0012 27.0 9.4 62 327-391 54-119 (150)
144 2ehh_A DHDPS, dihydrodipicolin 68.9 8 0.00027 36.8 6.3 107 236-376 15-136 (294)
145 2vvt_A Glutamate racemase; iso 68.7 17 0.00059 34.5 8.5 30 383-412 170-202 (290)
146 2pl1_A Transcriptional regulat 68.7 27 0.00094 26.2 8.2 62 327-391 32-97 (121)
147 1q6o_A Humps, 3-keto-L-gulonat 68.6 12 0.00041 33.5 7.0 62 201-285 45-107 (216)
148 4fo4_A Inosine 5'-monophosphat 68.5 6.6 0.00022 39.2 5.8 55 339-413 117-176 (366)
149 2vc6_A MOSA, dihydrodipicolina 68.3 8.1 0.00028 36.7 6.2 108 235-376 14-136 (292)
150 1b73_A Glutamate racemase; iso 68.2 30 0.001 31.8 9.9 166 202-384 15-208 (254)
151 2rfg_A Dihydrodipicolinate syn 67.9 8.2 0.00028 36.9 6.1 108 235-376 14-136 (297)
152 3kht_A Response regulator; PSI 67.9 35 0.0012 26.7 9.0 61 327-390 39-105 (144)
153 3cnb_A DNA-binding response re 67.7 40 0.0014 26.0 9.7 62 327-391 42-109 (143)
154 1eye_A DHPS 1, dihydropteroate 67.6 26 0.00088 33.8 9.5 99 310-415 13-132 (280)
155 3tak_A DHDPS, dihydrodipicolin 67.6 8.1 0.00028 36.7 6.0 109 234-376 14-137 (291)
156 3o1n_A 3-dehydroquinate dehydr 67.5 16 0.00056 34.9 8.1 94 322-415 45-167 (276)
157 3gt7_A Sensor protein; structu 67.3 41 0.0014 27.0 9.5 61 327-390 39-105 (154)
158 2qxy_A Response regulator; reg 67.3 12 0.00041 29.3 6.1 62 327-391 36-100 (142)
159 3r8r_A Transaldolase; pentose 67.2 3.4 0.00012 38.7 3.2 69 248-351 112-188 (212)
160 1xky_A Dihydrodipicolinate syn 67.1 8.9 0.00031 36.7 6.2 109 234-376 25-148 (301)
161 1xhf_A DYE resistance, aerobic 67.1 21 0.00073 27.0 7.3 62 327-391 35-99 (123)
162 4hb7_A Dihydropteroate synthas 66.8 9.2 0.00032 37.1 6.2 95 310-414 14-132 (270)
163 1sfl_A 3-dehydroquinate dehydr 66.6 11 0.00037 35.1 6.5 90 326-415 14-133 (238)
164 2ojp_A DHDPS, dihydrodipicolin 66.1 8.8 0.0003 36.5 5.9 109 234-376 14-137 (292)
165 2rjn_A Response regulator rece 66.1 48 0.0016 26.3 10.2 59 327-388 39-101 (154)
166 1aj0_A DHPS, dihydropteroate s 66.1 14 0.00049 35.6 7.4 101 309-415 21-141 (282)
167 3hv2_A Response regulator/HD d 66.0 45 0.0015 26.5 9.4 59 327-388 46-108 (153)
168 4h3d_A 3-dehydroquinate dehydr 65.8 22 0.00077 33.5 8.6 91 325-415 28-147 (258)
169 3flu_A DHDPS, dihydrodipicolin 65.8 9.9 0.00034 36.3 6.2 109 234-376 20-143 (297)
170 2fli_A Ribulose-phosphate 3-ep 65.7 15 0.0005 32.4 6.9 46 323-371 13-66 (220)
171 2qr3_A Two-component system re 65.7 32 0.0011 26.5 8.2 63 326-391 34-105 (140)
172 2xed_A Putative maleate isomer 65.7 2.9 9.8E-05 39.5 2.4 119 248-370 79-237 (273)
173 1thf_D HISF protein; thermophI 65.6 20 0.0007 32.1 8.0 184 158-412 31-222 (253)
174 3m5v_A DHDPS, dihydrodipicolin 65.5 9.9 0.00034 36.3 6.2 108 236-376 22-144 (301)
175 2yxg_A DHDPS, dihydrodipicolin 65.4 9.3 0.00032 36.2 5.9 107 236-376 15-136 (289)
176 1h5y_A HISF; histidine biosynt 65.4 8.3 0.00028 34.0 5.3 33 339-371 43-82 (253)
177 3ajx_A 3-hexulose-6-phosphate 65.4 19 0.00066 31.3 7.6 85 323-412 7-108 (207)
178 1rd5_A Tryptophan synthase alp 65.3 8 0.00027 35.6 5.3 18 354-371 82-99 (262)
179 2v9d_A YAGE; dihydrodipicolini 65.3 9.2 0.00031 37.5 6.0 108 235-376 45-167 (343)
180 3cfy_A Putative LUXO repressor 65.1 26 0.00087 27.6 7.7 63 326-391 35-101 (137)
181 3tdn_A FLR symmetric alpha-bet 65.1 14 0.00047 33.5 6.8 42 327-371 36-84 (247)
182 2fym_A Enolase; RNA degradosom 64.8 9.3 0.00032 38.3 6.1 125 271-413 220-368 (431)
183 1vs1_A 3-deoxy-7-phosphoheptul 64.4 18 0.00061 34.8 7.7 127 244-373 50-214 (276)
184 3l21_A DHDPS, dihydrodipicolin 64.1 9.8 0.00033 36.6 5.9 109 234-376 28-151 (304)
185 2zay_A Response regulator rece 64.1 24 0.00081 27.7 7.2 62 327-391 40-107 (147)
186 3eb2_A Putative dihydrodipicol 64.0 9.3 0.00032 36.6 5.7 109 234-376 17-140 (300)
187 1k68_A Phytochrome response re 64.0 46 0.0016 25.3 9.6 65 327-391 36-110 (140)
188 2eq5_A 228AA long hypothetical 64.0 38 0.0013 30.1 9.3 152 202-370 26-203 (228)
189 2r8w_A AGR_C_1641P; APC7498, d 63.9 8.9 0.0003 37.4 5.6 109 234-376 47-170 (332)
190 3e96_A Dihydrodipicolinate syn 63.8 8.1 0.00028 37.3 5.2 123 206-374 8-145 (316)
191 1o5k_A DHDPS, dihydrodipicolin 63.7 10 0.00035 36.4 5.9 107 236-376 27-148 (306)
192 2qiw_A PEP phosphonomutase; st 63.7 11 0.00039 35.7 6.1 103 160-280 96-203 (255)
193 3b2n_A Uncharacterized protein 63.5 30 0.001 26.9 7.7 63 326-391 36-102 (133)
194 3kcn_A Adenylate cyclase homol 63.5 54 0.0018 26.0 9.9 60 326-388 34-98 (151)
195 2ftp_A Hydroxymethylglutaryl-C 63.4 29 0.00099 33.0 8.9 62 340-411 94-176 (302)
196 3qze_A DHDPS, dihydrodipicolin 63.4 11 0.00038 36.4 6.2 109 234-376 36-159 (314)
197 3vkj_A Isopentenyl-diphosphate 63.3 11 0.00038 37.5 6.3 90 305-412 113-216 (368)
198 4dpp_A DHDPS 2, dihydrodipicol 63.2 40 0.0014 33.7 10.2 107 234-376 72-193 (360)
199 1o94_A Tmadh, trimethylamine d 63.2 14 0.00048 39.1 7.3 37 335-371 243-296 (729)
200 2r25_B Osmosensing histidine p 63.2 35 0.0012 26.7 8.1 65 327-391 35-106 (133)
201 3fa4_A 2,3-dimethylmalate lyas 62.9 31 0.0011 33.8 9.2 103 158-280 96-205 (302)
202 1zh2_A KDP operon transcriptio 62.7 24 0.00082 26.4 6.8 62 327-391 33-97 (121)
203 2qvg_A Two component response 62.4 21 0.00073 27.8 6.6 64 327-390 41-113 (143)
204 2hqr_A Putative transcriptiona 62.3 17 0.0006 31.0 6.6 76 327-406 32-115 (223)
205 1x1o_A Nicotinate-nucleotide p 62.3 12 0.00042 36.2 6.2 72 321-418 199-272 (286)
206 1rpx_A Protein (ribulose-phosp 62.2 29 0.001 30.9 8.3 46 323-371 20-73 (230)
207 2oog_A Glycerophosphoryl diest 62.2 21 0.00072 33.3 7.6 65 340-425 216-280 (287)
208 3exr_A RMPD (hexulose-6-phosph 62.0 15 0.0005 33.7 6.4 61 201-284 47-108 (221)
209 3r2g_A Inosine 5'-monophosphat 62.0 20 0.00069 35.8 7.8 76 158-274 100-176 (361)
210 1jcn_A Inosine monophosphate d 61.8 12 0.00039 38.2 6.2 55 339-413 264-323 (514)
211 1dbw_A Transcriptional regulat 61.8 34 0.0012 26.1 7.7 62 327-391 35-100 (126)
212 1zgz_A Torcad operon transcrip 61.8 29 0.00099 26.2 7.1 62 327-391 34-98 (122)
213 4fo4_A Inosine 5'-monophosphat 61.8 42 0.0014 33.4 10.0 46 159-217 109-154 (366)
214 3khj_A Inosine-5-monophosphate 61.6 15 0.0005 36.4 6.7 55 339-413 114-172 (361)
215 1f6k_A N-acetylneuraminate lya 61.6 9.9 0.00034 36.1 5.4 109 234-376 16-140 (293)
216 3l12_A Putative glycerophospho 61.6 14 0.00048 35.0 6.4 64 342-426 245-308 (313)
217 3daq_A DHDPS, dihydrodipicolin 61.4 9.9 0.00034 36.2 5.3 108 234-376 16-138 (292)
218 4af0_A Inosine-5'-monophosphat 61.1 27 0.00094 37.2 9.0 98 156-292 279-389 (556)
219 2rdm_A Response regulator rece 60.9 19 0.00065 27.6 6.0 60 327-388 37-101 (132)
220 2dwu_A Glutamate racemase; iso 60.9 34 0.0012 32.1 8.8 29 384-412 154-185 (276)
221 1h5y_A HISF; histidine biosynt 60.8 48 0.0016 29.0 9.3 92 159-286 156-250 (253)
222 2h9a_B CO dehydrogenase/acetyl 60.7 29 0.001 33.9 8.6 112 299-415 41-181 (310)
223 1geq_A Tryptophan synthase alp 60.7 22 0.00077 31.9 7.3 19 354-372 68-86 (248)
224 2nuw_A 2-keto-3-deoxygluconate 60.6 15 0.00052 34.8 6.4 106 234-376 12-133 (288)
225 3s5o_A 4-hydroxy-2-oxoglutarat 60.4 14 0.00048 35.4 6.2 108 235-376 28-152 (307)
226 3cz5_A Two-component response 60.1 41 0.0014 26.7 8.1 91 325-423 37-137 (153)
227 3i7m_A XAA-Pro dipeptidase; st 59.8 5.3 0.00018 33.0 2.8 36 267-303 1-37 (140)
228 2dqw_A Dihydropteroate synthas 59.7 11 0.00036 36.9 5.2 97 309-415 35-154 (294)
229 3qfe_A Putative dihydrodipicol 59.7 14 0.00047 35.8 6.0 109 235-377 25-150 (318)
230 2pz0_A Glycerophosphoryl diest 59.6 45 0.0015 30.4 9.2 125 265-425 123-250 (252)
231 2zsk_A PH1733, 226AA long hypo 59.5 98 0.0033 27.7 11.7 27 386-412 163-190 (226)
232 3l5l_A Xenobiotic reductase A; 59.4 21 0.00071 35.0 7.3 97 158-267 159-267 (363)
233 3f6c_A Positive transcription 59.4 34 0.0012 26.3 7.2 62 327-391 34-99 (134)
234 1w3i_A EDA, 2-keto-3-deoxy glu 59.3 17 0.0006 34.5 6.6 106 234-376 12-133 (293)
235 2oqr_A Sensory transduction pr 59.2 37 0.0013 29.0 8.2 77 327-406 36-121 (230)
236 1z41_A YQJM, probable NADH-dep 59.1 27 0.00091 33.7 7.9 94 159-267 146-250 (338)
237 1eix_A Orotidine 5'-monophosph 59.1 5.2 0.00018 37.1 2.9 44 318-364 16-64 (245)
238 3ks6_A Glycerophosphoryl diest 59.1 18 0.00061 33.2 6.4 122 270-425 116-243 (250)
239 3hdv_A Response regulator; PSI 58.8 31 0.0011 26.6 7.0 62 327-390 39-105 (136)
240 1dz3_A Stage 0 sporulation pro 58.6 40 0.0014 25.9 7.6 63 326-391 35-102 (130)
241 2nx9_A Oxaloacetate decarboxyl 58.6 1.7E+02 0.0057 30.1 17.6 173 148-374 22-208 (464)
242 2yyu_A Orotidine 5'-phosphate 58.5 6.3 0.00021 36.5 3.3 42 320-364 8-54 (246)
243 3usb_A Inosine-5'-monophosphat 58.4 18 0.00061 37.3 7.0 61 332-412 258-323 (511)
244 1qkk_A DCTD, C4-dicarboxylate 58.2 30 0.001 27.5 7.0 51 341-391 46-100 (155)
245 1y0e_A Putative N-acetylmannos 58.0 28 0.00096 30.7 7.3 36 331-370 24-60 (223)
246 2qsj_A DNA-binding response re 57.9 59 0.002 25.7 8.6 63 327-391 37-103 (154)
247 2cw6_A Hydroxymethylglutaryl-C 57.8 50 0.0017 31.2 9.5 79 319-411 74-173 (298)
248 1i3c_A Response regulator RCP1 57.8 49 0.0017 26.3 8.1 66 327-392 42-117 (149)
249 3o63_A Probable thiamine-phosp 57.7 18 0.00061 33.9 6.3 63 326-412 143-217 (243)
250 2czd_A Orotidine 5'-phosphate 57.6 1E+02 0.0035 27.3 12.2 142 202-413 42-184 (208)
251 2r91_A 2-keto-3-deoxy-(6-phosp 57.2 18 0.0006 34.3 6.2 104 236-376 13-132 (286)
252 4fxs_A Inosine-5'-monophosphat 57.1 45 0.0016 34.2 9.7 46 159-217 232-277 (496)
253 1vrd_A Inosine-5'-monophosphat 57.1 16 0.00056 36.7 6.3 55 339-413 246-305 (494)
254 3dz1_A Dihydrodipicolinate syn 56.6 14 0.00047 35.6 5.4 108 234-376 21-144 (313)
255 4adt_A Pyridoxine biosynthetic 56.5 14 0.00047 36.0 5.4 49 321-373 24-85 (297)
256 4avf_A Inosine-5'-monophosphat 56.3 20 0.0007 36.6 6.9 54 339-412 238-296 (490)
257 3fkr_A L-2-keto-3-deoxyarabona 56.2 19 0.00064 34.7 6.3 107 234-375 21-146 (309)
258 2c6q_A GMP reductase 2; TIM ba 55.8 21 0.00071 35.1 6.6 59 333-411 121-186 (351)
259 1vcf_A Isopentenyl-diphosphate 55.8 5.5 0.00019 38.3 2.5 87 306-413 112-211 (332)
260 1mvo_A PHOP response regulator 55.6 28 0.00095 26.8 6.2 62 327-391 35-100 (136)
261 3vnd_A TSA, tryptophan synthas 55.6 33 0.0011 32.7 7.8 58 354-411 82-152 (267)
262 1s2w_A Phosphoenolpyruvate pho 55.6 1.3E+02 0.0043 29.2 12.0 104 158-281 95-207 (295)
263 3a5f_A Dihydrodipicolinate syn 55.5 9.8 0.00034 36.1 4.2 108 234-376 15-137 (291)
264 3m6m_D Sensory/regulatory prot 55.3 57 0.0019 25.9 8.2 62 327-391 46-115 (143)
265 1rqb_A Transcarboxylase 5S sub 55.3 29 0.00099 36.5 8.0 126 147-304 108-246 (539)
266 2z6i_A Trans-2-enoyl-ACP reduc 55.1 27 0.00091 33.5 7.2 33 339-371 127-167 (332)
267 3inp_A D-ribulose-phosphate 3- 55.1 36 0.0012 32.1 7.9 88 321-413 35-140 (246)
268 3kto_A Response regulator rece 55.1 28 0.00096 27.2 6.2 51 341-391 49-105 (136)
269 3r0j_A Possible two component 54.7 92 0.0032 27.3 10.1 75 327-404 55-139 (250)
270 3ilh_A Two component response 54.5 51 0.0017 25.5 7.6 62 327-388 43-114 (146)
271 2gkg_A Response regulator homo 54.5 45 0.0015 24.9 7.0 59 327-389 37-102 (127)
272 3nwr_A A rubisco-like protein; 54.3 15 0.0005 37.9 5.5 137 243-413 174-318 (432)
273 2vef_A Dihydropteroate synthas 54.3 20 0.00068 35.1 6.2 74 309-388 16-105 (314)
274 3bg3_A Pyruvate carboxylase, m 54.1 25 0.00084 38.3 7.4 120 159-303 199-330 (718)
275 1s8n_A Putative antiterminator 54.0 31 0.001 29.2 6.7 62 327-391 46-110 (205)
276 3bw2_A 2-nitropropane dioxygen 53.9 31 0.0011 33.4 7.5 41 327-371 154-213 (369)
277 2o55_A Putative glycerophospho 53.4 28 0.00096 31.8 6.8 69 340-425 187-255 (258)
278 1xi3_A Thiamine phosphate pyro 53.4 26 0.0009 30.3 6.3 62 327-412 117-188 (215)
279 1ep3_A Dihydroorotate dehydrog 53.1 36 0.0012 31.5 7.5 66 332-413 113-195 (311)
280 1ydo_A HMG-COA lyase; TIM-barr 53.1 35 0.0012 32.8 7.6 80 318-411 74-174 (307)
281 3t7v_A Methylornithine synthas 53.0 1.2E+02 0.004 28.7 11.2 33 254-286 288-337 (350)
282 2hmc_A AGR_L_411P, dihydrodipi 53.0 21 0.0007 35.2 6.1 49 327-375 103-160 (344)
283 3usb_A Inosine-5'-monophosphat 52.9 68 0.0023 33.0 10.2 47 158-217 256-302 (511)
284 3rqi_A Response regulator prot 52.9 33 0.0011 28.7 6.6 62 327-391 39-104 (184)
285 3qvq_A Phosphodiesterase OLEI0 52.8 27 0.00091 32.0 6.5 65 341-426 186-250 (252)
286 3hzh_A Chemotaxis response reg 52.6 57 0.002 26.2 7.8 62 327-389 69-134 (157)
287 1dbt_A Orotidine 5'-phosphate 51.8 8.6 0.0003 35.3 3.0 40 322-364 9-53 (239)
288 3lua_A Response regulator rece 51.7 41 0.0014 26.2 6.6 62 327-390 37-105 (140)
289 1p6q_A CHEY2; chemotaxis, sign 51.5 33 0.0011 26.1 6.0 62 327-391 39-106 (129)
290 3grc_A Sensor protein, kinase; 51.3 59 0.002 25.1 7.5 61 327-390 38-105 (140)
291 2tps_A Protein (thiamin phosph 51.2 32 0.0011 30.2 6.5 62 327-412 125-198 (227)
292 4avf_A Inosine-5'-monophosphat 50.6 1E+02 0.0035 31.4 11.0 68 158-264 229-296 (490)
293 3oa3_A Aldolase; structural ge 50.6 81 0.0028 30.8 9.8 189 61-284 22-232 (288)
294 3h1g_A Chemotaxis protein CHEY 50.5 62 0.0021 24.9 7.5 62 327-390 38-105 (129)
295 1jbe_A Chemotaxis protein CHEY 50.3 67 0.0023 24.3 7.5 62 327-391 37-104 (128)
296 3t8y_A CHEB, chemotaxis respon 50.1 44 0.0015 27.3 6.8 62 326-390 58-124 (164)
297 1ypf_A GMP reductase; GUAC, pu 49.9 33 0.0011 33.1 6.9 61 332-413 108-176 (336)
298 3no5_A Uncharacterized protein 49.1 14 0.00047 35.7 4.1 56 153-216 27-82 (275)
299 2jfn_A Glutamate racemase; cel 48.8 76 0.0026 29.9 9.1 158 201-412 35-201 (285)
300 3kts_A Glycerol uptake operon 48.8 19 0.00063 33.3 4.7 52 343-414 128-179 (192)
301 2nql_A AGR_PAT_674P, isomerase 48.8 57 0.002 31.7 8.5 135 244-413 164-315 (388)
302 3t7v_A Methylornithine synthas 48.5 1.2E+02 0.0042 28.5 10.6 72 318-411 86-166 (350)
303 3h5i_A Response regulator/sens 48.4 27 0.00092 27.4 5.1 61 327-389 37-101 (140)
304 2qf7_A Pyruvate carboxylase pr 48.2 45 0.0015 38.0 8.6 219 159-416 647-896 (1165)
305 1ka9_F Imidazole glycerol phos 48.0 52 0.0018 29.4 7.5 185 158-413 32-224 (252)
306 3q58_A N-acetylmannosamine-6-p 48.0 59 0.002 29.9 8.0 35 333-371 39-74 (229)
307 3gr7_A NADPH dehydrogenase; fl 48.0 36 0.0012 33.1 6.9 95 158-267 145-250 (340)
308 2gwr_A DNA-binding response re 47.7 31 0.0011 30.0 5.9 75 327-404 37-120 (238)
309 1w6t_A Enolase; bacterial infe 47.7 20 0.00067 36.2 5.1 127 271-412 227-379 (444)
310 3vgf_A Malto-oligosyltrehalose 47.7 1.1E+02 0.0037 31.4 10.7 122 155-283 118-276 (558)
311 4adt_A Pyridoxine biosynthetic 47.6 30 0.001 33.6 6.2 54 160-218 31-84 (297)
312 1mb3_A Cell division response 47.3 47 0.0016 24.9 6.2 60 327-389 33-98 (124)
313 3r2g_A Inosine 5'-monophosphat 47.0 35 0.0012 34.1 6.7 42 333-374 103-149 (361)
314 3k13_A 5-methyltetrahydrofolat 46.8 54 0.0018 31.9 7.9 87 327-415 35-141 (300)
315 3dmp_A Uracil phosphoribosyltr 46.7 25 0.00087 32.7 5.4 48 158-223 144-193 (217)
316 3uw2_A Phosphoglucomutase/phos 46.5 1.5E+02 0.0051 30.3 11.5 91 166-267 214-307 (485)
317 2poz_A Putative dehydratase; o 46.4 1.3E+02 0.0046 29.1 10.7 85 327-413 211-307 (392)
318 4h17_A Hydrolase, isochorismat 46.3 36 0.0012 30.3 6.2 78 166-267 118-195 (197)
319 3lmz_A Putative sugar isomeras 46.3 73 0.0025 28.2 8.2 90 255-375 39-135 (257)
320 1nvm_A HOA, 4-hydroxy-2-oxoval 46.3 68 0.0023 31.1 8.5 111 160-303 96-219 (345)
321 2qgy_A Enolase from the enviro 46.2 1.1E+02 0.0038 29.8 10.1 114 244-391 149-270 (391)
322 3qja_A IGPS, indole-3-glycerol 46.2 1E+02 0.0035 29.2 9.5 168 149-414 66-242 (272)
323 1mdl_A Mandelate racemase; iso 46.1 72 0.0025 30.5 8.6 115 244-391 144-265 (359)
324 3b4u_A Dihydrodipicolinate syn 45.7 28 0.00096 33.1 5.6 109 234-376 16-143 (294)
325 3ovp_A Ribulose-phosphate 3-ep 45.7 54 0.0018 30.2 7.4 87 321-413 12-118 (228)
326 4dad_A Putative pilus assembly 45.5 43 0.0015 26.2 5.9 50 341-390 66-119 (146)
327 2jk1_A HUPR, hydrogenase trans 45.4 52 0.0018 25.6 6.3 60 326-388 31-94 (139)
328 2r14_A Morphinone reductase; H 44.4 57 0.002 32.3 7.8 187 158-393 167-367 (377)
329 3h5d_A DHDPS, dihydrodipicolin 44.4 35 0.0012 32.8 6.2 109 234-376 20-144 (311)
330 1bd3_D Uprtase, uracil phospho 44.3 30 0.001 32.8 5.5 48 158-223 171-220 (243)
331 2gjl_A Hypothetical protein PA 44.2 58 0.002 30.9 7.5 34 338-371 134-177 (328)
332 1eep_A Inosine 5'-monophosphat 43.7 1.2E+02 0.004 29.9 9.8 47 158-217 153-199 (404)
333 3n53_A Response regulator rece 43.6 38 0.0013 26.4 5.2 63 326-391 33-101 (140)
334 2ovl_A Putative racemase; stru 43.4 52 0.0018 31.8 7.2 115 244-391 146-267 (371)
335 1a04_A Nitrate/nitrite respons 43.3 76 0.0026 26.8 7.5 77 326-405 38-124 (215)
336 1tv5_A Dhodehase, dihydroorota 43.0 52 0.0018 33.6 7.4 59 339-416 321-404 (443)
337 3chv_A Prokaryotic domain of u 42.5 20 0.00069 34.8 4.1 57 153-217 31-87 (284)
338 2w6r_A Imidazole glycerol phos 42.5 48 0.0016 30.0 6.4 32 340-371 41-79 (266)
339 2y5s_A DHPS, dihydropteroate s 42.2 41 0.0014 32.7 6.2 99 309-415 29-148 (294)
340 3b0p_A TRNA-dihydrouridine syn 42.0 63 0.0021 31.4 7.6 33 339-371 154-202 (350)
341 1icp_A OPR1, 12-oxophytodienoa 41.5 55 0.0019 32.3 7.1 188 158-393 168-370 (376)
342 1ydn_A Hydroxymethylglutaryl-C 41.3 47 0.0016 31.2 6.3 50 151-212 150-199 (295)
343 3c2e_A Nicotinate-nucleotide p 41.2 31 0.001 33.3 5.1 66 199-291 185-253 (294)
344 2ox4_A Putative mandelate race 41.1 2E+02 0.0069 27.9 11.1 141 241-415 143-319 (403)
345 1kgs_A DRRD, DNA binding respo 41.1 69 0.0024 27.1 6.9 76 327-405 34-119 (225)
346 3ldv_A Orotidine 5'-phosphate 41.0 16 0.00054 34.8 3.0 48 320-371 31-83 (255)
347 2gl5_A Putative dehydratase pr 40.9 1.7E+02 0.0058 28.5 10.5 86 327-414 230-327 (410)
348 1q6o_A Humps, 3-keto-L-gulonat 40.5 21 0.00073 31.8 3.7 86 320-409 7-108 (216)
349 2b7n_A Probable nicotinate-nuc 40.3 27 0.00092 33.2 4.5 88 297-413 164-256 (273)
350 3edf_A FSPCMD, cyclomaltodextr 40.3 1.4E+02 0.0049 30.7 10.3 156 123-283 102-331 (601)
351 2ze0_A Alpha-glucosidase; TIM 40.2 42 0.0014 34.2 6.2 60 158-223 32-103 (555)
352 2gou_A Oxidoreductase, FMN-bin 40.1 74 0.0025 31.2 7.8 185 158-393 162-361 (365)
353 1vcv_A Probable deoxyribose-ph 40.0 80 0.0027 29.5 7.7 125 240-416 14-152 (226)
354 1vhn_A Putative flavin oxidore 39.9 68 0.0023 30.4 7.3 80 319-413 61-159 (318)
355 1zcc_A Glycerophosphodiester p 39.8 30 0.001 31.6 4.6 65 340-425 168-234 (248)
356 2i1o_A Nicotinate phosphoribos 39.7 57 0.0019 32.9 7.0 66 200-290 197-273 (398)
357 4af0_A Inosine-5'-monophosphat 39.5 53 0.0018 35.0 7.0 58 335-412 286-348 (556)
358 3m07_A Putative alpha amylase; 39.3 41 0.0014 35.4 6.1 124 154-283 152-309 (618)
359 2otd_A Glycerophosphodiester p 39.3 12 0.00043 33.9 2.0 62 342-424 184-245 (247)
360 3tfx_A Orotidine 5'-phosphate 39.2 25 0.00084 33.6 4.1 46 322-371 10-61 (259)
361 1qap_A Quinolinic acid phospho 39.1 83 0.0028 30.5 7.8 116 270-415 157-281 (296)
362 1lt8_A Betaine-homocysteine me 39.1 13 0.00045 37.7 2.3 24 391-414 51-74 (406)
363 4ab4_A Xenobiotic reductase B; 39.0 1.1E+02 0.0037 30.3 8.8 180 158-392 154-346 (362)
364 3bre_A Probable two-component 38.8 85 0.0029 28.9 7.6 64 326-392 50-119 (358)
365 1ep3_A Dihydroorotate dehydrog 38.8 69 0.0023 29.6 7.0 41 355-414 230-270 (311)
366 3ist_A Glutamate racemase; str 38.7 58 0.002 30.8 6.6 166 202-384 20-217 (269)
367 2r91_A 2-keto-3-deoxy-(6-phosp 38.4 1.9E+02 0.0064 27.2 10.0 107 153-294 16-129 (286)
368 4djd_D C/Fe-SP, corrinoid/iron 38.3 46 0.0016 32.9 6.0 74 339-413 91-186 (323)
369 3kyj_B CHEY6 protein, putative 38.3 56 0.0019 25.6 5.5 63 325-389 45-112 (145)
370 3hbl_A Pyruvate carboxylase; T 38.1 45 0.0016 37.9 6.6 215 159-412 629-874 (1150)
371 3vk5_A MOEO5; TIM barrel, tran 38.1 38 0.0013 33.2 5.3 50 321-371 43-101 (286)
372 2q5c_A NTRC family transcripti 38.0 86 0.003 28.0 7.3 91 326-422 36-158 (196)
373 3nhm_A Response regulator; pro 37.8 1.3E+02 0.0045 22.8 7.9 58 327-388 35-98 (133)
374 1jcn_A Inosine monophosphate d 37.8 62 0.0021 32.8 7.0 47 158-217 255-301 (514)
375 1ua7_A Alpha-amylase; beta-alp 37.5 32 0.0011 33.7 4.7 107 153-263 14-170 (422)
376 3o07_A Pyridoxine biosynthesis 37.5 77 0.0026 31.3 7.3 53 320-376 13-78 (291)
377 1h1y_A D-ribulose-5-phosphate 37.3 70 0.0024 28.7 6.6 85 324-414 17-120 (228)
378 2pcq_A Putative dihydrodipicol 37.3 41 0.0014 31.8 5.2 48 327-376 73-128 (283)
379 2yzr_A Pyridoxal biosynthesis 37.3 59 0.002 32.5 6.6 75 339-415 34-149 (330)
380 1jub_A Dihydroorotate dehydrog 37.2 45 0.0015 31.2 5.5 45 355-413 147-191 (311)
381 4e38_A Keto-hydroxyglutarate-a 37.1 25 0.00085 33.1 3.7 90 143-255 127-229 (232)
382 1tqx_A D-ribulose-5-phosphate 37.0 35 0.0012 31.6 4.7 59 334-412 128-199 (227)
383 3no3_A Glycerophosphodiester p 37.0 42 0.0014 30.6 5.1 117 272-425 116-235 (238)
384 3igs_A N-acetylmannosamine-6-p 36.9 1.1E+02 0.0039 28.0 8.1 35 333-371 39-74 (232)
385 1p2f_A Response regulator; DRR 36.8 52 0.0018 28.0 5.4 75 327-406 33-117 (220)
386 1tqj_A Ribulose-phosphate 3-ep 36.8 17 0.00059 33.2 2.5 55 339-413 131-200 (230)
387 1s4d_A Uroporphyrin-III C-meth 36.7 90 0.0031 29.2 7.5 87 193-285 25-121 (280)
388 1yxy_A Putative N-acetylmannos 36.6 85 0.0029 27.9 7.0 33 339-371 98-138 (234)
389 2jba_A Phosphate regulon trans 36.6 32 0.0011 26.0 3.7 50 342-391 46-101 (127)
390 3c3w_A Two component transcrip 36.5 1E+02 0.0035 26.6 7.4 64 325-391 33-100 (225)
391 2pju_A Propionate catabolism o 36.5 1.2E+02 0.0043 28.0 8.3 121 286-422 14-170 (225)
392 1eep_A Inosine 5'-monophosphat 36.2 68 0.0023 31.5 6.8 37 338-374 161-202 (404)
393 3tr2_A Orotidine 5'-phosphate 36.0 28 0.00096 32.6 3.9 46 322-371 14-64 (239)
394 4aie_A Glucan 1,6-alpha-glucos 35.8 50 0.0017 32.6 5.8 60 158-223 33-104 (549)
395 2y7e_A 3-keto-5-aminohexanoate 35.5 22 0.00075 34.5 3.1 57 153-217 31-87 (282)
396 2xwp_A Sirohydrochlorin cobalt 35.4 2E+02 0.0067 26.5 9.5 125 158-294 61-201 (264)
397 3q9s_A DNA-binding response re 35.4 63 0.0022 28.7 6.0 76 327-405 69-153 (249)
398 3m47_A Orotidine 5'-phosphate 35.2 23 0.00078 32.7 3.1 45 323-370 19-68 (228)
399 2v82_A 2-dehydro-3-deoxy-6-pho 35.2 89 0.003 27.3 6.8 86 327-413 17-107 (212)
400 3qfw_A Ribulose-1,5-bisphospha 35.1 36 0.0012 34.5 4.7 139 242-413 142-283 (378)
401 1me8_A Inosine-5'-monophosphat 34.8 1.2E+02 0.0043 30.8 8.7 46 158-216 242-288 (503)
402 4a29_A Engineered retro-aldol 34.7 1.1E+02 0.0037 29.6 7.7 56 338-412 72-131 (258)
403 3glc_A Aldolase LSRF; TIM barr 34.7 81 0.0028 30.6 7.0 62 334-413 194-256 (295)
404 3apt_A Methylenetetrahydrofola 34.7 3.2E+02 0.011 26.3 16.2 184 166-383 6-219 (310)
405 3exr_A RMPD (hexulose-6-phosph 34.6 24 0.00083 32.3 3.1 81 322-407 11-108 (221)
406 1vd6_A Glycerophosphoryl diest 34.6 39 0.0013 30.3 4.5 189 189-422 15-222 (224)
407 3i42_A Response regulator rece 34.3 44 0.0015 25.4 4.2 47 327-376 35-87 (127)
408 1f76_A Dihydroorotate dehydrog 34.2 80 0.0027 29.9 6.8 42 354-414 275-318 (336)
409 3k1d_A 1,4-alpha-glucan-branch 34.1 69 0.0023 34.7 7.0 104 154-263 261-399 (722)
410 1m7x_A 1,4-alpha-glucan branch 33.9 79 0.0027 32.9 7.2 126 127-263 131-291 (617)
411 3aj7_A Oligo-1,6-glucosidase; 33.8 62 0.0021 33.5 6.4 60 158-223 41-112 (589)
412 1xm3_A Thiazole biosynthesis p 33.8 70 0.0024 29.9 6.2 33 339-371 144-183 (264)
413 2nzl_A Hydroxyacid oxidase 1; 33.5 60 0.0021 32.4 6.0 25 349-374 236-260 (392)
414 3m5v_A DHDPS, dihydrodipicolin 33.3 1.9E+02 0.0065 27.4 9.3 154 152-365 24-185 (301)
415 3lte_A Response regulator; str 32.9 1.5E+02 0.0051 22.5 7.0 36 327-365 38-76 (132)
416 1rvk_A Isomerase/lactonizing e 32.9 1.7E+02 0.0059 28.1 9.0 116 244-391 149-277 (382)
417 3mm4_A Histidine kinase homolo 32.9 1.3E+02 0.0043 25.8 7.3 48 327-374 94-159 (206)
418 1m53_A Isomaltulose synthase; 32.8 66 0.0023 32.9 6.3 60 158-223 46-117 (570)
419 1vc4_A Indole-3-glycerol phosp 32.8 1.6E+02 0.0054 27.5 8.5 55 339-412 75-133 (254)
420 3lop_A Substrate binding perip 32.8 60 0.0021 29.7 5.5 92 279-373 135-229 (364)
421 1vpx_A Protein (transaldolase 32.7 30 0.001 32.7 3.4 42 250-292 125-174 (230)
422 1jub_A Dihydroorotate dehydrog 32.5 1E+02 0.0036 28.7 7.2 41 355-414 229-271 (311)
423 2zic_A Dextran glucosidase; TI 32.4 63 0.0021 32.9 6.0 99 158-263 32-191 (543)
424 3ceu_A Thiamine phosphate pyro 32.2 85 0.0029 27.9 6.3 60 327-411 97-169 (210)
425 3mcm_A 2-amino-4-hydroxy-6-hyd 32.2 1.1E+02 0.0039 31.4 7.9 98 309-415 197-323 (442)
426 1bf2_A Isoamylase; hydrolase, 32.2 1E+02 0.0035 33.0 7.9 131 128-263 179-372 (750)
427 1rcu_A Conserved hypothetical 32.2 1.1E+02 0.0039 27.8 7.2 126 243-393 42-171 (195)
428 3bo9_A Putative nitroalkan dio 31.9 1E+02 0.0034 29.6 7.1 33 339-371 141-181 (326)
429 3dhu_A Alpha-amylase; structur 31.7 89 0.003 30.6 6.8 123 158-283 31-192 (449)
430 2h6r_A Triosephosphate isomera 31.6 37 0.0013 30.8 3.8 28 342-373 33-60 (219)
431 3uhf_A Glutamate racemase; str 31.5 57 0.002 31.1 5.3 163 202-385 39-236 (274)
432 2ayx_A Sensor kinase protein R 31.5 2.1E+02 0.0072 25.4 8.8 61 327-390 161-225 (254)
433 1p0k_A Isopentenyl-diphosphate 31.5 72 0.0025 30.6 6.0 32 340-371 200-256 (349)
434 1dcf_A ETR1 protein; beta-alph 31.3 73 0.0025 24.6 5.1 61 327-391 39-108 (136)
435 3cu5_A Two component transcrip 31.2 47 0.0016 26.2 4.0 64 325-391 35-102 (141)
436 2qr6_A IMP dehydrogenase/GMP r 31.2 1E+02 0.0036 30.0 7.2 53 340-413 176-238 (393)
437 1ny5_A Transcriptional regulat 31.0 1.3E+02 0.0045 29.1 7.9 63 327-392 32-98 (387)
438 3lab_A Putative KDPG (2-keto-3 30.9 25 0.00085 33.0 2.6 51 145-217 114-164 (217)
439 1l6w_A Fructose-6-phosphate al 30.9 30 0.001 32.3 3.2 44 249-293 114-165 (220)
440 1wx0_A Transaldolase; structur 30.8 38 0.0013 31.6 3.8 44 249-293 121-172 (223)
441 4gqr_A Pancreatic alpha-amylas 30.7 57 0.002 31.3 5.2 69 152-223 18-101 (496)
442 1jfl_A Aspartate racemase; alp 30.6 35 0.0012 30.6 3.5 58 311-369 41-100 (228)
443 2dgd_A 223AA long hypothetical 30.5 2.3E+02 0.008 25.0 8.8 107 288-413 67-177 (223)
444 2j48_A Two-component sensor ki 30.4 80 0.0027 22.9 4.9 47 327-376 33-85 (119)
445 2wnw_A Activated by transcript 30.1 2E+02 0.0067 29.0 9.1 92 201-295 125-240 (447)
446 1ub3_A Aldolase protein; schif 30.0 1.2E+02 0.004 28.1 6.9 81 158-267 72-154 (220)
447 1vhc_A Putative KHG/KDPG aldol 29.8 55 0.0019 30.2 4.7 51 144-216 111-161 (224)
448 4g9p_A 4-hydroxy-3-methylbut-2 29.7 35 0.0012 35.0 3.6 166 238-411 34-295 (406)
449 1o5o_A Uracil phosphoribosyltr 29.7 86 0.0029 29.2 6.0 44 158-218 151-194 (221)
450 2o7s_A DHQ-SDH PR, bifunctiona 29.7 76 0.0026 32.4 6.1 91 325-415 13-125 (523)
451 3p6l_A Sugar phosphate isomera 29.6 2E+02 0.0069 25.2 8.2 93 255-377 31-139 (262)
452 1lwj_A 4-alpha-glucanotransfer 29.6 96 0.0033 30.3 6.6 60 158-224 24-95 (441)
453 3kru_A NADH:flavin oxidoreduct 29.6 1.2E+02 0.004 29.7 7.3 93 158-266 144-249 (343)
454 1zja_A Trehalulose synthase; s 29.4 82 0.0028 32.1 6.3 60 158-223 33-104 (557)
455 3cwn_A Transaldolase B; direct 29.4 55 0.0019 32.5 4.9 22 249-273 181-202 (337)
456 1yio_A Response regulatory pro 29.4 41 0.0014 28.2 3.5 62 327-391 36-101 (208)
457 3a10_A Response regulator; pho 29.4 1E+02 0.0035 22.8 5.4 49 327-378 33-85 (116)
458 2i14_A Nicotinate-nucleotide p 29.3 1.3E+02 0.0044 30.2 7.6 68 199-291 193-272 (395)
459 3cu2_A Ribulose-5-phosphate 3- 29.2 54 0.0018 30.6 4.6 66 324-413 134-216 (237)
460 3b0p_A TRNA-dihydrouridine syn 29.2 70 0.0024 31.1 5.6 72 330-413 70-163 (350)
461 1ydo_A HMG-COA lyase; TIM-barr 29.2 82 0.0028 30.3 6.0 90 161-270 85-181 (307)
462 3hg3_A Alpha-galactosidase A; 29.0 2.3E+02 0.0079 28.7 9.4 110 158-285 37-165 (404)
463 3i65_A Dihydroorotate dehydrog 28.7 80 0.0027 32.2 6.0 106 158-289 284-405 (415)
464 2qv0_A Protein MRKE; structura 28.6 2E+02 0.0067 22.2 7.2 45 326-373 42-90 (143)
465 2r14_A Morphinone reductase; H 28.5 1.1E+02 0.0036 30.3 6.8 33 339-371 265-304 (377)
466 2oho_A Glutamate racemase; iso 28.4 1E+02 0.0035 28.7 6.4 91 201-303 26-136 (273)
467 4ekj_A Beta-xylosidase; TIM-ba 28.3 4.2E+02 0.014 25.8 11.4 33 148-181 76-108 (500)
468 3zwt_A Dihydroorotate dehydrog 28.2 1.9E+02 0.0065 28.5 8.5 71 328-412 162-252 (367)
469 1z41_A YQJM, probable NADH-dep 28.1 1.5E+02 0.0051 28.4 7.6 65 339-412 154-247 (338)
470 3hjz_A Transaldolase B; parach 27.8 24 0.00083 35.1 2.0 17 249-265 165-181 (334)
471 1xx1_A Smase I, sphingomyelina 27.7 52 0.0018 30.3 4.1 27 399-425 237-263 (285)
472 2nv1_A Pyridoxal biosynthesis 27.6 1.2E+02 0.004 28.6 6.7 32 340-371 39-83 (305)
473 3zwt_A Dihydroorotate dehydrog 27.6 1.4E+02 0.0048 29.5 7.5 43 355-416 285-329 (367)
474 1ub3_A Aldolase protein; schif 27.6 1.3E+02 0.0044 27.8 6.8 140 222-416 4-157 (220)
475 1uok_A Oligo-1,6-glucosidase; 27.4 80 0.0027 32.2 5.8 60 158-223 32-103 (558)
476 3aty_A Tcoye, prostaglandin F2 27.1 1.1E+02 0.0038 30.3 6.7 183 158-392 175-374 (379)
477 1vcv_A Probable deoxyribose-ph 27.1 2.8E+02 0.0094 25.9 9.0 103 158-291 68-188 (226)
478 1ydn_A Hydroxymethylglutaryl-C 26.9 76 0.0026 29.7 5.2 90 161-269 83-178 (295)
479 2oz8_A MLL7089 protein; struct 26.9 2.8E+02 0.0097 26.9 9.5 136 244-413 145-296 (389)
480 2yxg_A DHDPS, dihydrodipicolin 26.9 3.3E+02 0.011 25.5 9.6 109 153-294 18-133 (289)
481 3ovp_A Ribulose-phosphate 3-ep 26.9 77 0.0026 29.1 5.1 163 158-413 18-196 (228)
482 1xtt_A Probable uracil phospho 26.9 62 0.0021 30.0 4.5 47 158-223 148-195 (216)
483 2nuw_A 2-keto-3-deoxygluconate 26.9 2.5E+02 0.0085 26.4 8.8 103 158-294 21-130 (288)
484 2ehh_A DHDPS, dihydrodipicolin 26.8 3.1E+02 0.011 25.8 9.4 109 153-294 18-133 (294)
485 1tqj_A Ribulose-phosphate 3-ep 26.8 2.1E+02 0.0073 25.9 8.1 86 324-414 15-119 (230)
486 1vyr_A Pentaerythritol tetrani 26.8 1.7E+02 0.0059 28.6 7.9 186 158-392 162-361 (364)
487 1xky_A Dihydrodipicolinate syn 26.7 2.8E+02 0.0094 26.3 9.1 149 158-366 34-189 (301)
488 3i65_A Dihydroorotate dehydrog 26.7 1.5E+02 0.005 30.3 7.5 43 355-416 332-376 (415)
489 2x5o_A UDP-N-acetylmuramoylala 26.5 23 0.00078 35.1 1.6 38 326-364 388-425 (439)
490 3out_A Glutamate racemase; str 26.5 1.2E+02 0.0042 28.5 6.5 155 202-369 22-204 (268)
491 1vcf_A Isopentenyl-diphosphate 26.4 1.4E+02 0.0047 28.5 7.0 33 339-371 202-261 (332)
492 2r8w_A AGR_C_1641P; APC7498, d 26.4 3E+02 0.01 26.6 9.5 105 158-294 56-167 (332)
493 2xed_A Putative maleate isomer 26.2 77 0.0026 29.7 5.1 123 273-414 80-214 (273)
494 2ftp_A Hydroxymethylglutaryl-C 26.1 51 0.0017 31.3 3.9 90 160-269 86-182 (302)
495 3mz2_A Glycerophosphoryl diest 26.1 54 0.0019 31.1 4.0 29 397-425 249-277 (292)
496 1v9s_A Uracil phosphoribosyltr 26.0 89 0.003 28.7 5.3 48 158-223 138-185 (208)
497 1xrs_A D-lysine 5,6-aminomutas 25.9 31 0.0011 36.2 2.5 55 249-304 166-243 (516)
498 1w3i_A EDA, 2-keto-3-deoxy glu 25.9 2.9E+02 0.0098 26.1 9.0 103 158-294 21-130 (293)
499 3iix_A Biotin synthetase, puta 25.8 1E+02 0.0035 28.7 5.8 50 149-209 80-129 (348)
500 3lkb_A Probable branched-chain 25.8 38 0.0013 31.5 2.8 55 327-384 186-242 (392)
No 1
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=100.00 E-value=1.8e-162 Score=1192.12 Aligned_cols=331 Identities=44% Similarity=0.739 Sum_probs=313.4
Q ss_pred CCCCcccCCCCCCCCCCCCCChHHHhhhhcCCCCCCCceeeEEEeeCCC-CcccCCCCCceeechhhhHHHHHHHHHHcC
Q 014237 92 AGTPVVPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVG 170 (428)
Q Consensus 92 ~g~p~~~~~~~~~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~-~~~I~SMPGv~r~s~~~~l~~~v~~~~~~G 170 (428)
.|||...|++. +||||||+|+++|+|++||+|+++||||||||+||++ ++||+|||||||||+| .|++++++++++|
T Consensus 2 ~~tp~~~~~p~-~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~~I~SMPGv~r~sid-~l~~~~~~~~~lG 79 (337)
T 1w5q_A 2 SFTPANRAYPY-TRLRRNRRDDFSRRLVRENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSID-QLLIEAEEWVALG 79 (337)
T ss_dssp ----CCCCTTT-CCTTTTTSSHHHHHHHCCCCCCGGGEEEEEEEESSSSCEEECTTSTTCEEEEHH-HHHHHHHHHHHTT
T ss_pred CCCccCCCCCC-CCCCcCCCChHHHHHHhcCCCCHHHceeeEEEecCCCCccccCCCCCceeeCHH-HHHHHHHHHHHCC
Confidence 58999999986 7999999999999999999999999999999999996 7899999999999997 6999999999999
Q ss_pred CCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHH
Q 014237 171 VNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCK 250 (428)
Q Consensus 171 I~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak 250 (428)
|++|+|||++|+++||+.||+|||+||+||||||+||++||||+|||||||||||+||||||++++|+|+||+||++|++
T Consensus 80 i~~v~LFgv~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~vitDvcLc~YT~HGHcGil~~~g~V~ND~Tl~~L~k 159 (337)
T 1w5q_A 80 IPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCEFTTHGQCGILDDDGYVLNDVSIDVLVR 159 (337)
T ss_dssp CCEEEEEECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSCBCHHHHHHHHHH
T ss_pred CCEEEEecCCCcccCCcccCccCCCCChHHHHHHHHHHHCCCeEEEEeeecccCCCCCcceeeCCCCcCccHHHHHHHHH
Confidence 99999999878767999999999999999999999999999999999999999999999999976899999999999999
Q ss_pred HHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCC--CCccccCCCCCCh
Q 014237 251 QAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRF--GDKKTYQMNPANY 328 (428)
Q Consensus 251 ~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~f--gDRktYQmdpaN~ 328 (428)
|||+||+||||||||||||||||++||++||++||+||+||||||||||+||||||||++|+|+| ||||||||||+|+
T Consensus 160 ~Als~A~AGADiVAPSdMMDGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpaN~ 239 (337)
T 1w5q_A 160 QALSHAEAGAQVVAPSDMMDGRIGAIREALESAGHTNVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPANS 239 (337)
T ss_dssp HHHHHHHTTCSEEEECSCCTTHHHHHHHHHHHTTCTTCEEEEEEEEBCCGGGHHHHHC----------CGGGTSBCTTCS
T ss_pred HHHHHHHcCCCeEecccccccHHHHHHHHHHHCCCCCceeehhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcc
Q 014237 329 REALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGA 408 (428)
Q Consensus 329 ~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGA 408 (428)
+|||||+++|++||||||||||||+|||||+++|++|++||+||||||||||||||+++|||| +++++|+|++||||||
T Consensus 240 ~EAlrE~~~Di~EGAD~vMVKPal~YLDIir~vk~~~~~PvaaYqVSGEYAMikaAa~~GwiD-~~~v~Esl~~~kRAGA 318 (337)
T 1w5q_A 240 DEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKDEFRAPTFVYQVSGEYAMHMGAIQNGWLA-ESVILESLTAFKRAGA 318 (337)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCGGGHHHHHHHHHHHCSCEEEEECHHHHHHHHHHHHTTSSC-TTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhHHhCCCEEEEcCCCchHHHHHHHHHhcCCCEEEEEcCcHHHHHHHHHHcCCcc-HHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred cEeehhcHHHHHHHHhc
Q 014237 409 DIILTYFALQAARCLCG 425 (428)
Q Consensus 409 d~IiTYfA~e~a~wL~~ 425 (428)
|+||||||+|+|+||++
T Consensus 319 d~IiTYfA~~~a~~L~~ 335 (337)
T 1w5q_A 319 DGILTYFAKQAAEQLRR 335 (337)
T ss_dssp SEEEETTHHHHHHHHHC
T ss_pred CEEeeecHHHHHHHHhc
Confidence 99999999999999985
No 2
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=100.00 E-value=3.8e-161 Score=1179.35 Aligned_cols=325 Identities=53% Similarity=0.889 Sum_probs=313.3
Q ss_pred cccCCCCCCCCCCCCCChHHHhhhhcCCCCCCCceeeEEEeeCCC-CcccCCCCCceeechhhhHHHHHHHHHHcCCCeE
Q 014237 96 VVPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSV 174 (428)
Q Consensus 96 ~~~~~~~~~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~-~~~I~SMPGv~r~s~~~~l~~~v~~~~~~GI~sv 174 (428)
.+.++++.+||||||+|+++|+|++||+|+++||||||||+||++ ++||+|||||||||+| .|++++++++++||++|
T Consensus 3 ~~~~l~~~~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~~I~SMPGv~r~sid-~l~~~~~~~~~lGi~~v 81 (328)
T 1w1z_A 3 QLDLLNIVHRPRRLRRTAALRNLVQENTLTVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTID-RAVEECKELYDLGIQGI 81 (328)
T ss_dssp -------CCCGGGGTSSHHHHHHHCCCCCCGGGEEEEEEEESSSSCEEEETTEEEEEEEEHH-HHHHHHHHHHHHTCCEE
T ss_pred ccCcCCcccCCCcCCCChHHHHHHhcCcCCHHHceeeEEEecCCCCccccCCCCCeeEeCHH-HHHHHHHHHHHCCCCEE
Confidence 356788889999999999999999999999999999999999996 7899999999999997 69999999999999999
Q ss_pred EEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHH
Q 014237 175 VLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVS 254 (428)
Q Consensus 175 ~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als 254 (428)
+|||+ |+ +||+.||+|||+||+||||||+||++||||+|||||||||||+||||||++ +|+|+||+||++|+||||+
T Consensus 82 ~LFgv-p~-~Kd~~gs~A~~~~g~v~rair~iK~~~p~l~vitDvcLc~YT~HGHcGil~-~g~V~ND~Tl~~L~k~Als 158 (328)
T 1w1z_A 82 DLFGI-PE-QKTEDGSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLVK-DGIILNDETVEVLQKMAVS 158 (328)
T ss_dssp EEEEC-CS-SCCSSCGGGGCTTSHHHHHHHHHHHHSTTSEEEEEECSTTTSTTSCSSEES-SSCEEHHHHHHHHHHHHHH
T ss_pred EEECC-CC-CCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccCCCCCceeecc-CCcCccHHHHHHHHHHHHH
Confidence 99996 74 699999999999999999999999999999999999999999999999996 7999999999999999999
Q ss_pred HHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHH
Q 014237 255 QARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVE 334 (428)
Q Consensus 255 ~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE 334 (428)
||+||||||||||||||||++||++||++||+||+||||||||||+||||||||++|+|+|||||||||||+|++|||||
T Consensus 159 ~A~AGADiVAPSdMMDGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN~~EAlrE 238 (328)
T 1w1z_A 159 HAEAGADFVSPSDMMDGRIGAIREALDETDHSDVGILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPANTEEAMKE 238 (328)
T ss_dssp HHHHTCSEEEECSCCTTHHHHHHHHHHHTTCTTSEEEEEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTCSHHHHHH
T ss_pred HHHcCCCeEecccccccHHHHHHHHHHhCCCCCceeeehhHHHhhhccchHHHHhccCCCCCCccccCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehh
Q 014237 335 AQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 335 ~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTY 414 (428)
+++|++||||||||||||+|||||+++|++|++||+||||||||||||||+++||||++++++|+|++|||||||+||||
T Consensus 239 ~~~Di~EGAD~vMVKPal~YLDIir~vk~~~~~P~aaYqVSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTY 318 (328)
T 1w1z_A 239 VELDIVEGADIVMVKPGLAYLDIVWRTKERFDVPVAIYHVSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTY 318 (328)
T ss_dssp HHHHHHHTCSEEEEESCGGGHHHHHHHHHHHCSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred HHhhHHhCCCEEEEcCCCchHHHHHHHHHhcCCCEEEEEccHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHh
Q 014237 415 FALQAARCLC 424 (428)
Q Consensus 415 fA~e~a~wL~ 424 (428)
||+|+|+||+
T Consensus 319 fA~~~a~~L~ 328 (328)
T 1w1z_A 319 YAKEAAKKLR 328 (328)
T ss_dssp THHHHHHHHC
T ss_pred cHHHHHHhhC
Confidence 9999999994
No 3
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=100.00 E-value=5.7e-161 Score=1186.88 Aligned_cols=333 Identities=55% Similarity=0.904 Sum_probs=324.7
Q ss_pred CCCCCCCcccCCCCCCCCCCCCCChHHHhhhhcCCCCCCCceeeEEEeeCCCCcccCCCCCceeechhhhHHHHHHHHHH
Q 014237 89 AAPAGTPVVPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARD 168 (428)
Q Consensus 89 ~~p~g~p~~~~~~~~~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~I~SMPGv~r~s~~~~l~~~v~~~~~ 168 (428)
..-.|+|.+ ++.+||||||+++++|+||+||+|+++||||||||+||++++||+|||||||||+| .|+++++++++
T Consensus 9 ~~~~~~~~v---~~~~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~I~SMPGv~r~sid-~l~~~~~~~~~ 84 (356)
T 3obk_A 9 NNNYGEVWL---PIQARPRRNRKNRAVRQLVQENLVKPSSLIYPLFVHDEETSVPIPSMPGQSRLSME-DLLKEVGEARS 84 (356)
T ss_dssp ECTTSCEEC---CCSCCGGGGGSSHHHHHHHCCCCCCGGGEEEEEEEESSSSCEECTTSTTCEEECHH-HHHHHHHHHHH
T ss_pred cCCCCCEee---ccCCCCCcCCCCHHHHHHHhhcCCCHHHceeeEEEecCCCCcccCCCCCceEECHH-HHHHHHHHHHH
Confidence 556788887 55679999999999999999999999999999999999878899999999999997 69999999999
Q ss_pred cCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecC-CCccccHHHHHH
Q 014237 169 VGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQ 247 (428)
Q Consensus 169 ~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~-~g~IdND~Tl~~ 247 (428)
+||++|+|||++++++||+.||+|||+||+||||||+||++||||+|||||||||||+||||||+++ +|+|+||+||++
T Consensus 85 lGi~av~LFgv~~p~~KD~~gs~A~~~~g~v~rAir~iK~~~P~l~VitDVcLc~YT~HGHcGil~~~~g~V~ND~Tl~~ 164 (356)
T 3obk_A 85 YGIKAFMLFPKVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLLADVALDPYSSMGHDGVVDEQSGKIVNDLTVHQ 164 (356)
T ss_dssp TTCCEEEEEEECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHSTTCEEEEEECSGGGBTTCCSSCBCTTTCCBCHHHHHHH
T ss_pred CCCCEEEEecCCCcccCCcccccccCCCChHHHHHHHHHHHCCCCEEEEeeccccccCCCcceeeeCCCCCCCCHHHHHH
Confidence 9999999999987789999999999999999999999999999999999999999999999999975 499999999999
Q ss_pred HHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCC-CCCCCccccCCCCC
Q 014237 248 LCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSN-PRFGDKKTYQMNPA 326 (428)
Q Consensus 248 Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sa-p~fgDRktYQmdpa 326 (428)
|++|||+||+||||||||||||||||++||++||++||+||+||||||||||+||||||||++|+ |+|||||||||||+
T Consensus 165 Lak~Als~A~AGADiVAPSdMMDGrV~aIR~aLd~~G~~~v~IMsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpa 244 (356)
T 3obk_A 165 LCKQAITLARAGADMVCPSDMMDGRVSAIRESLDMEGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPS 244 (356)
T ss_dssp HHHHHHHHHHHTCSEEEECSCCTTHHHHHHHHHHHTTCTTSEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTT
T ss_pred HHHHHHHHHHcCCCeEeccccccCHHHHHHHHHHHCCCCCcceehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHh
Q 014237 327 NYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRA 406 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRA 406 (428)
|++|||||+++|++||||||||||||+|||||+++|++|++||+||||||||||||||+++||||++++++|+|++||||
T Consensus 245 N~~EAlrE~~lDi~EGAD~vMVKPal~YLDIi~~vk~~~~~PvaaYqVSGEYAMikAAa~~GwiD~~~~v~Esl~~~kRA 324 (356)
T 3obk_A 245 NSREAEREAEADASEGADMLMVKPGLPYLDVLAKIREKSKLPMVAYHVSGEYAMLKAAAEKGYISEKDTVLEVLKSFRRA 324 (356)
T ss_dssp CSHHHHHHHHHHHHTTCSEEEEESSGGGHHHHHHHHHHCSSCEEEEECHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhHhcCCCEEEecCCCcHHHHHHHHHhcCCCCEEEEEccHHHHHHHHHHHcCCccHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEeehhcHHHHHHHHhc
Q 014237 407 GADIILTYFALQAARCLCG 425 (428)
Q Consensus 407 GAd~IiTYfA~e~a~wL~~ 425 (428)
|||+||||||+|+|+||++
T Consensus 325 GAd~IiTYfA~~~a~~L~~ 343 (356)
T 3obk_A 325 GADAVATYYAKEAAKWMVE 343 (356)
T ss_dssp TCSEEEETTHHHHHHHHHH
T ss_pred CCCEEehhhHHHHHHHHHh
Confidence 9999999999999999985
No 4
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=100.00 E-value=1.4e-158 Score=1159.46 Aligned_cols=319 Identities=48% Similarity=0.770 Sum_probs=312.8
Q ss_pred CCCCCCCCCCCChHHHhhhhcCCCCCCCceeeEEEeeCCC-CcccCCCCCceeechhhhHHHHHHHHHHcCCCeEEEeec
Q 014237 101 PLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPK 179 (428)
Q Consensus 101 ~~~~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~-~~~I~SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgv 179 (428)
++.+||||||+|+++|+|++||+|+++||||||||+||++ ++||+|||||||||+| .|++++++++++||++|+|||+
T Consensus 2 ~m~~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~~I~SMPGv~r~sid-~l~~~~~~~~~lGi~~v~LFgv 80 (323)
T 1l6s_A 2 DLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEK-HLAREIERIANAGIRSVMTFGI 80 (323)
T ss_dssp CCSCCGGGGGSSHHHHHHHCCCCCCGGGEEEEEEEETTCSSCEECTTSTTCEEEEGG-GHHHHHHHHHHHTCCEEEEEEE
T ss_pred cccccCCccCCChHHHHHhhcCcCCHHHceeeEEEecCCCCccccCCCCCceeeCHH-HHHHHHHHHHHCCCCEEEEeCC
Confidence 4568999999999999999999999999999999999996 7899999999999997 6999999999999999999997
Q ss_pred CCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcC
Q 014237 180 VPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAG 259 (428)
Q Consensus 180 i~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AG 259 (428)
|+ +||+.||+|||+||+||||||+||++||||+|||||||||||+||||||++ +|+|+||+||++|+||||+||+||
T Consensus 81 -p~-~Kd~~gs~A~~~~g~v~rair~iK~~~pdl~vitDvcLc~YT~HGHcGil~-~g~V~ND~Tl~~Lak~Als~A~AG 157 (323)
T 1l6s_A 81 -SH-HTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLC-EHGVDNDATLENLGKQAVVAAAAG 157 (323)
T ss_dssp -CS-SCBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBSSCCSSCBC-SSSBCHHHHHHHHHHHHHHHHHHT
T ss_pred -CC-CCCccccccCCCCCcHHHHHHHHHHHCCCeEEEEeeeccccCCCCceEecc-CCcCccHHHHHHHHHHHHHHHHcC
Confidence 74 699999999999999999999999999999999999999999999999995 799999999999999999999999
Q ss_pred CCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhch
Q 014237 260 ADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADE 339 (428)
Q Consensus 260 ADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi 339 (428)
||||||||||||||++||++||++||+||+||||||||||+||||||||++|+|+ ||||||||||+|++|||||+++|+
T Consensus 158 AdiVAPSdMMDGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~-GDRktYQmdpaN~~EAlre~~~Di 236 (323)
T 1l6s_A 158 ADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALK-GDRKSYQMNPMNRREAIRESLLDE 236 (323)
T ss_dssp CSEEEECSCCTTHHHHHHHHHHHTTCTTCEEBCCCEEBCCSCCHHHHHHHTCCCS-SCCTTTSBCTTCHHHHHHHHHHHH
T ss_pred CCeEecccccccHHHHHHHHHHhCCCCCceeeehhHHHhHHhhHHHHHHhcCCCC-CCccccCCCCCCHHHHHHHHHhhH
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhcHHHH
Q 014237 340 SEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQA 419 (428)
Q Consensus 340 ~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYfA~e~ 419 (428)
+||||||||||||+|||||+++|++|++||+||||||||||||||+++||+|++++++|+|++|||||||+||||||+|+
T Consensus 237 ~EGAD~vMVKPal~YLDIi~~vk~~~~~P~aaYqVSGEYAMikaAa~~GwiD~~~~vlEsl~~~kRAGAd~IiTYfA~~~ 316 (323)
T 1l6s_A 237 AQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDL 316 (323)
T ss_dssp HTTCSBEEEESCTTCHHHHHHHHTTCSSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHH
T ss_pred HhCCceEEEecCcchhHHHHHHHHhcCCCeEEEEcCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEeehhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh
Q 014237 420 ARCLC 424 (428)
Q Consensus 420 a~wL~ 424 (428)
|+||.
T Consensus 317 a~~~~ 321 (323)
T 1l6s_A 317 AEKKI 321 (323)
T ss_dssp HHTTS
T ss_pred HHHhh
Confidence 99985
No 5
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=100.00 E-value=1e-156 Score=1154.00 Aligned_cols=327 Identities=36% Similarity=0.559 Sum_probs=317.9
Q ss_pred CCCCCCCCCCCCCChHHHhhhhcCCCCCCCceeeEEEeeCCC-CcccCCCCCceeechhhhHHHHHHHHHHcCCCeEEEe
Q 014237 99 SLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLF 177 (428)
Q Consensus 99 ~~~~~~R~RRlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~-~~~I~SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LF 177 (428)
|++..+++++.+.|+++|+|++||+|+++||||||||+||++ ++||+|||||||||+| .|++++++++++||++|+||
T Consensus 11 ~~~~~~~l~~g~~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~~I~SMPGv~r~sid-~l~~~~~~~~~lGi~~v~LF 89 (342)
T 1h7n_A 11 PTEISSVLAGGYNHPLLRQWQSERQLTKNMLIFPLFISDNPDDFTEIDSLPNINRIGVN-RLKDYLKPLVAKGLRSVILF 89 (342)
T ss_dssp CCCGGGCCGGGSSSHHHHHHTCSSCCCGGGEEEEEEEESSTTCEEECTTSTTCEEECHH-HHHHHHHHHHHTTCCEEEEE
T ss_pred CCCcccccccccCCHHHHHHHhcCcCCHHHceeeEEEecCCCCceeCCCCCCceeeCHH-HHHHHHHHHHHCCCCEEEEe
Confidence 366778999999999999999999999999999999999996 7899999999999997 69999999999999999999
Q ss_pred ecCCCC-CCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHH
Q 014237 178 PKVPDA-LKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQA 256 (428)
Q Consensus 178 gvi~~~-~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A 256 (428)
|++|+. +||+.||+|||+||+||||||+||++||||+|||||||||||+||||||++++|+|+||+||++|+||||+||
T Consensus 90 gv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~VitDvcLc~YT~HGHcGil~~~g~V~ND~Tl~~Lak~Als~A 169 (342)
T 1h7n_A 90 GVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTSHGHCGVLYDDGTINRERSVSRLAAVAVNYA 169 (342)
T ss_dssp EECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSSBCHHHHHHHHHHHHHHHH
T ss_pred cccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCCCceeEECCCCcCccHHHHHHHHHHHHHHH
Confidence 986642 7999999999999999999999999999999999999999999999999976899999999999999999999
Q ss_pred HcCCCeecCCCCCCchHHHHHHHHHHCCC-CCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHH
Q 014237 257 RAGADVVSPSDMMDGRVGAIRAALDAEGF-QHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEA 335 (428)
Q Consensus 257 ~AGADiVAPSDMMDGRV~aIR~aLD~~Gf-~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~ 335 (428)
+||||||||||||||||++||++||++|| +||+||||||||||+||||||||++|+|+|||||||||||+|++|||||+
T Consensus 170 ~AGAdiVAPSdMMDGrV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~ 249 (342)
T 1h7n_A 170 KAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRAL 249 (342)
T ss_dssp HHTCSEEEECCCCTTHHHHHHHHHHHTTCTTTCEEEEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHH
T ss_pred HcCCCeeecccccccHHHHHHHHHHHCCCccCceEeechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HhchhcCCceEEecCCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehh
Q 014237 336 QADESEGADILLVKPGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 336 ~lDi~EGADilMVKPal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTY 414 (428)
++|++||||||||||||+|||||+++|++| ++||+||||||||||||||+++||+|++++++|+|++|||||||+||||
T Consensus 250 ~~Di~EGAD~vMVKPal~YLDIi~~vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTY 329 (342)
T 1h7n_A 250 ERDMSEGADGIIVKPSTFYLDIMRDASEICKDLPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLIITY 329 (342)
T ss_dssp HHHHHTTCSEEEEESSGGGHHHHHHHHHHTTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred HhhHHhCCCeEEEecCccHHHHHHHHHHhccCCCeEEEEcCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEEee
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcc
Q 014237 415 FALQAARCLCGE 426 (428)
Q Consensus 415 fA~e~a~wL~~~ 426 (428)
||+|+|+||+++
T Consensus 330 fA~~~a~~L~~~ 341 (342)
T 1h7n_A 330 LAPEFLDWLDEE 341 (342)
T ss_dssp THHHHHHHTTC-
T ss_pred cHHHHHHHhhcc
Confidence 999999999853
No 6
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=100.00 E-value=3e-156 Score=1146.39 Aligned_cols=323 Identities=40% Similarity=0.701 Sum_probs=267.5
Q ss_pred CCCCCCCCCCCChHHHhhhh-cCCCCCCCceeeEEEeeCCC-CcccCCCCCceeechhhhHHHHHHHHHHcCCCeEEEee
Q 014237 101 PLSRRPRRNRKSPAMRASFQ-ETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFP 178 (428)
Q Consensus 101 ~~~~R~RRlR~~~~~R~lv~-Et~L~~~dLI~PlFV~eg~~-~~~I~SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFg 178 (428)
+..+++++.+.|+++|+|++ ||+|+++||||||||+||++ ++||+|||||||||+| .|++++++++++||++|+|||
T Consensus 2 ~~~~~l~~g~~~~~~R~lv~~Et~L~~~dLI~PlFV~eg~~~~~~I~SMPGv~r~sid-~l~~~~~~~~~~Gi~~v~LFg 80 (330)
T 1pv8_A 2 QPQSVLHSGYLHPLLRAWQTATTTLNASNLIYPIFVTDVPDDIQPITSLPGVARYGVK-RLEEMLRPLVEEGLRCVLIFG 80 (330)
T ss_dssp ---------CCCHHHHHHHTTTTCCCGGGEEEEEEECSCTTCEEECSSSTTCEEECHH-HHHHHHHHHHHHTCCEEEEEE
T ss_pred CcccccccccCCHHHHHHHhcCCccCHHHceeeEEEecCCCCccccCCCCCceeecHH-HHHHHHHHHHHCCCCEEEEec
Confidence 34568999999999999999 99999999999999999996 7899999999999997 699999999999999999999
Q ss_pred cCCCCC-CCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHH
Q 014237 179 KVPDAL-KSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQAR 257 (428)
Q Consensus 179 vi~~~~-KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~ 257 (428)
+ |++. ||+.||+|||+||+||||||+||++||||+|||||||||||+||||||++++|+|+||+||++|+||||+||+
T Consensus 81 v-p~~~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~vitDvcLc~YT~HGHcGil~~~g~v~ND~Tl~~La~~Als~A~ 159 (330)
T 1pv8_A 81 V-PSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLVACDVCLCPYTSHGHCGLLSENGAFRAEESRQRLAEVALAYAK 159 (330)
T ss_dssp C-C--------------CCSHHHHHHHHHHHHSTTSEEEEEECCC---------------CHHHHHHHHHHHHHHHHHHH
T ss_pred C-CcccCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCCCceeEECCCCcCccHHHHHHHHHHHHHHHH
Confidence 7 6543 9999999999999999999999999999999999999999999999999768999999999999999999999
Q ss_pred cCCCeecCCCCCCchHHHHHHHHHHCCCCC-ceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHH
Q 014237 258 AGADVVSPSDMMDGRVGAIRAALDAEGFQH-VSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQ 336 (428)
Q Consensus 258 AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~-v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~ 336 (428)
||||||||||||||||++||++||++||+| |+||||||||||+||||||||++|+|+|||||||||||+|++|||||++
T Consensus 160 AGAdiVAPSdMMDGrV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~ 239 (330)
T 1pv8_A 160 AGCQVVAPSDMMDGRVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVD 239 (330)
T ss_dssp HTCSEEEECC--CCHHHHHHHHHHHTTCTTTCEEBCCCEECCCGGGHHHHHCC-------------CCTTCHHHHHHHHH
T ss_pred cCCCeeecccccccHHHHHHHHHHhCCCcCCceEeehhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred hchhcCCceEEecCCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhc
Q 014237 337 ADESEGADILLVKPGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 337 lDi~EGADilMVKPal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
+|++||||||||||||+|||||+++|++| ++||+||||||||||||||+++||+|++++++|+|++|||||||+|||||
T Consensus 240 ~Di~EGAD~vMVKPal~YLDIi~~vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTYf 319 (330)
T 1pv8_A 240 RDVREGADMLMVKPGMPYLDIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYY 319 (330)
T ss_dssp HHHHTTCSBEEEESCGGGHHHHHHHHHHSTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETT
T ss_pred hhHHhCCceEEEecCccHHHHHHHHHHhcCCCCeEEEEcCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEeeec
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc
Q 014237 416 ALQAARCLCG 425 (428)
Q Consensus 416 A~e~a~wL~~ 425 (428)
|+|+|+||++
T Consensus 320 A~~~a~~L~~ 329 (330)
T 1pv8_A 320 TPQLLQWLKE 329 (330)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHhcc
Confidence 9999999975
No 7
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.43 E-value=0.084 Score=46.61 Aligned_cols=162 Identities=19% Similarity=0.255 Sum_probs=94.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
+.++.++.+.+ |+..+-+ |. + + +-.+|+ ..|+.||+.+|++-|+.|.-+. +
T Consensus 14 ~~~~~~~~~~~-~v~~iev-~~-~--~--------~~~~g~--~~i~~l~~~~~~~~i~~~l~~~-----------d--- 64 (207)
T 3ajx_A 14 AALELAGKVAE-YVDIIEL-GT-P--L--------IKAEGL--SVITAVKKAHPDKIVFADMKTM-----------D--- 64 (207)
T ss_dssp HHHHHHHHHGG-GCSEEEE-CH-H--H--------HHHHCT--HHHHHHHHHSTTSEEEEEEEEC-----------S---
T ss_pred HHHHHHHHhhc-cCCEEEE-Cc-H--H--------HHhhCH--HHHHHHHHhCCCCeEEEEEEec-----------C---
Confidence 46677777766 7777555 42 2 1 112233 4789999999999898887531 0
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFG 316 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fg 316 (428)
| -+| .++ ..+++|||.|.-..-.+ ..+..+++.+.+.|.. +++ | +
T Consensus 65 -i--~~~---~~~---~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~-~gv--------~-~--------------- 110 (207)
T 3ajx_A 65 -A--GEL---EAD---IAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKG-VVV--------D-L--------------- 110 (207)
T ss_dssp -C--HHH---HHH---HHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE-EEE--------E-C---------------
T ss_pred -c--cHH---HHH---HHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCc-eEE--------E-E---------------
Confidence 1 122 222 45679999996333333 6788888888777642 222 0 0
Q ss_pred CccccCCCCCChHHHHHHHHhchhcCCceE-Ee------cCCCchH-HHHHHHHhhCCCCeEEEEechHHHHHHHHHHCC
Q 014237 317 DKKTYQMNPANYREALVEAQADESEGADIL-LV------KPGLPYL-DVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALK 388 (428)
Q Consensus 317 DRktYQmdpaN~~EAlrE~~lDi~EGADil-MV------KPal~YL-DII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G 388 (428)
..+.|..|.+.++. +.|+|+| +. +++..+. +-|++++.. ++|+.+ -|
T Consensus 111 ------~s~~~p~~~~~~~~---~~g~d~v~~~~~~~~~~~g~~~~~~~i~~~~~~-~~pi~v---------------~G 165 (207)
T 3ajx_A 111 ------IGIEDKATRAQEVR---ALGAKFVEMHAGLDEQAKPGFDLNGLLAAGEKA-RVPFSV---------------AG 165 (207)
T ss_dssp ------TTCSSHHHHHHHHH---HTTCSEEEEECCHHHHTSTTCCTHHHHHHHHHH-TSCEEE---------------ES
T ss_pred ------ecCCChHHHHHHHH---HhCCCEEEEEecccccccCCCchHHHHHHhhCC-CCCEEE---------------EC
Confidence 13335566444442 2389998 43 3566666 444444443 677653 23
Q ss_pred CCchhhHHHHHHHHHHHhcccEee
Q 014237 389 MIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 389 ~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
-|+.+ +...+.+||||.|+
T Consensus 166 GI~~~-----~~~~~~~aGad~vv 184 (207)
T 3ajx_A 166 GVKVA-----TIPAVQKAGAEVAV 184 (207)
T ss_dssp SCCGG-----GHHHHHHTTCSEEE
T ss_pred CcCHH-----HHHHHHHcCCCEEE
Confidence 34432 45566789999986
No 8
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=96.40 E-value=0.13 Score=48.41 Aligned_cols=172 Identities=19% Similarity=0.240 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHH------------------HHHHHHHHHCCCeEE--Ee
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVP------------------RTIWLLKDRYPDLVI--YT 217 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~------------------rAIr~iK~~~Pdl~V--it 217 (428)
...+.++.+.+.|+..+.| |+ |- -|+.. ||++. ..++.||+.++++-| |+
T Consensus 32 ~~~~~~~~l~~~GaD~iei-g~-P~--sdp~~------DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~ 101 (268)
T 1qop_A 32 QSLKIIDTLIDAGADALEL-GV-PF--SDPLA------DGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLM 101 (268)
T ss_dssp HHHHHHHHHHHTTCSSEEE-EC-CC--SCCTT------CCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEE-CC-CC--CCccC------CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 4788899999999999888 74 63 23321 34444 348899988654333 32
Q ss_pred eecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCC-eecCCCCCCchHHHHHHHHHHCCCCCceeechhhh
Q 014237 218 DVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGAD-VVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAK 296 (428)
Q Consensus 218 DVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGAD-iVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaK 296 (428)
+.+ | +. ..|. .+-+-..+++||| ++.| |.-...+....+.+.++|...+.+++=+
T Consensus 102 y~n--~--------v~-~~g~----------~~~~~~~~~aGadgii~~-d~~~e~~~~~~~~~~~~g~~~i~l~~p~-- 157 (268)
T 1qop_A 102 YAN--L--------VF-NNGI----------DAFYARCEQVGVDSVLVA-DVPVEESAPFRQAALRHNIAPIFICPPN-- 157 (268)
T ss_dssp CHH--H--------HH-TTCH----------HHHHHHHHHHTCCEEEET-TCCGGGCHHHHHHHHHTTCEEECEECTT--
T ss_pred ccc--H--------HH-HhhH----------HHHHHHHHHcCCCEEEEc-CCCHHHHHHHHHHHHHcCCcEEEEECCC--
Confidence 211 1 01 1121 2333346789999 6666 6666678888888989887555443332
Q ss_pred hccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCC---------CchHHHHHHHHhhCCC
Q 014237 297 YASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPG---------LPYLDVIRLLRDKYPL 367 (428)
Q Consensus 297 yASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPa---------l~YLDII~~vk~~~~l 367 (428)
...|-++++..+ .+|...+|--.| ..-++.|+++|+..++
T Consensus 158 ------------------------------t~~~~i~~i~~~-~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~ 206 (268)
T 1qop_A 158 ------------------------------ADDDLLRQVASY-GRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAA 206 (268)
T ss_dssp ------------------------------CCHHHHHHHHHH-CCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCC
T ss_pred ------------------------------CCHHHHHHHHhh-CCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccCC
Confidence 333444554433 455544442221 1236899999999999
Q ss_pred CeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 368 PIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 368 PvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
||++ -|-|.. -|....+..+|||.+|.
T Consensus 207 pi~v---------------ggGI~t----~e~~~~~~~agAD~vVV 233 (268)
T 1qop_A 207 PALQ---------------GFGISS----PEQVSAAVRAGAAGAIS 233 (268)
T ss_dssp CEEE---------------ESSCCS----HHHHHHHHHTTCSEEEE
T ss_pred cEEE---------------ECCCCC----HHHHHHHHHcCCCEEEE
Confidence 9876 233442 23344556789998873
No 9
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.47 E-value=0.81 Score=40.72 Aligned_cols=159 Identities=17% Similarity=0.152 Sum_probs=92.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
...+.++.+.+.|...+.+- + ...|+.||+.+ ++-++.+..-+ | ..+|--+-
T Consensus 24 ~~~~~a~~~~~~Ga~~i~~~-------------------~--~~~i~~i~~~~-~~pv~~~~~~~-~-~~~~~~i~---- 75 (223)
T 1y0e_A 24 IMSKMALAAYEGGAVGIRAN-------------------T--KEDILAIKETV-DLPVIGIVKRD-Y-DHSDVFIT---- 75 (223)
T ss_dssp HHHHHHHHHHHHTCSEEEEE-------------------S--HHHHHHHHHHC-CSCEEEECBCC-C-TTCCCCBS----
T ss_pred cHHHHHHHHHHCCCeeeccC-------------------C--HHHHHHHHHhc-CCCEEeeeccC-C-CccccccC----
Confidence 46777888889999887431 1 36788999876 55555544322 1 12332221
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeec--------CCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhh
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVS--------PSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREAL 309 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVA--------PSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa 309 (428)
.+.+.++ ...++|||.|. |.+-..--|..+|+.+ .| ..++.
T Consensus 76 --~~~~~i~-------~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~--~~---~~v~~----------------- 124 (223)
T 1y0e_A 76 --ATSKEVD-------ELIESQCEVIALDATLQQRPKETLDELVSYIRTHA--PN---VEIMA----------------- 124 (223)
T ss_dssp --CSHHHHH-------HHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHC--TT---SEEEE-----------------
T ss_pred --CcHHHHH-------HHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhC--CC---ceEEe-----------------
Confidence 1222222 24679999886 3211223355555543 13 33320
Q ss_pred cCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecC------------CCchHHHHHHHHhhCCCCeEEEEechH
Q 014237 310 DSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKP------------GLPYLDVIRLLRDKYPLPIAAYQVSGE 377 (428)
Q Consensus 310 ~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKP------------al~YLDII~~vk~~~~lPvaaYqVSGE 377 (428)
++.+..|+.+ =.+.|+|+||+=+ ..+-++.++++++.+++||.+
T Consensus 125 --------------~~~t~~e~~~----~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia------ 180 (223)
T 1y0e_A 125 --------------DIATVEEAKN----AARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIA------ 180 (223)
T ss_dssp --------------ECSSHHHHHH----HHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEE------
T ss_pred --------------cCCCHHHHHH----HHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEE------
Confidence 1234666544 2468999999843 234467899999999999875
Q ss_pred HHHHHHHHHCCCC-chhhHHHHHHHHHHHhcccEeeh
Q 014237 378 YSMIKAGGALKMI-DEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 378 YaMIkaAa~~G~i-D~~~~vlEsL~~~kRAGAd~IiT 413 (428)
.|-| +. |.+..+.++|||.++.
T Consensus 181 ---------~GGI~~~-----~~~~~~~~~Gad~v~v 203 (223)
T 1y0e_A 181 ---------EGNVITP-----DMYKRVMDLGVHCSVV 203 (223)
T ss_dssp ---------ESSCCSH-----HHHHHHHHTTCSEEEE
T ss_pred ---------ecCCCCH-----HHHHHHHHcCCCEEEE
Confidence 4555 53 3444566789998863
No 10
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=95.37 E-value=0.5 Score=43.70 Aligned_cols=178 Identities=16% Similarity=0.182 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcC--------CCCC----HHHHHHHHHHHC--CCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYN--------DNGL----VPRTIWLLKDRY--PDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~--------~~g~----v~rAIr~iK~~~--Pdl~VitDVcLc~ 223 (428)
...+.++.+.+.|+..|-| |. |- -|+....-.- .+|. ....++.+|+.. | ++++.+. ++
T Consensus 33 ~~~~~~~~l~~~Gad~iel-g~-p~--~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~P-v~~m~~~--~~ 105 (262)
T 1rd5_A 33 TTAEALRLLDGCGADVIEL-GV-PC--SDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCP-VVLLSYY--KP 105 (262)
T ss_dssp HHHHHHHHHHHTTCSSEEE-EC-CC--SCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSC-EEEECCS--HH
T ss_pred HHHHHHHHHHHcCCCEEEE-CC-CC--CCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC-EEEEecC--cH
Confidence 4889999999999999887 63 42 2321110000 1111 234577777763 3 3333211 11
Q ss_pred CCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhcccccc
Q 014237 224 YSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYG 303 (428)
Q Consensus 224 YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYG 303 (428)
+.. ..+ + . .+++|||.|-=.|+-...+..+++.+.++|...+..+
T Consensus 106 ---------~~~-~~~--~----~-------a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~------------ 150 (262)
T 1rd5_A 106 ---------IMF-RSL--A----K-------MKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLT------------ 150 (262)
T ss_dssp ---------HHS-CCT--H----H-------HHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEE------------
T ss_pred ---------HHH-HHH--H----H-------HHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEE------------
Confidence 000 111 1 1 6789999544457766678888888888887655543
Q ss_pred chhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCC-------C--chHHHHHHHHhhCCCCeEEEEe
Q 014237 304 PFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPG-------L--PYLDVIRLLRDKYPLPIAAYQV 374 (428)
Q Consensus 304 PFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPa-------l--~YLDII~~vk~~~~lPvaaYqV 374 (428)
.|.+..|.++++..+. +|-..+|--++ . .-++.|+++|+..++||.+
T Consensus 151 --------------------a~~t~~e~~~~~~~~~-~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~v--- 206 (262)
T 1rd5_A 151 --------------------TPAIPEDRMKEITKAS-EGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAV--- 206 (262)
T ss_dssp --------------------CTTSCHHHHHHHHHHC-CSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEE---
T ss_pred --------------------CCCCCHHHHHHHHhcC-CCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEE---
Confidence 2444456666655443 24444442232 1 1467899999999999987
Q ss_pred chHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEee--hhcHH
Q 014237 375 SGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIIL--TYFAL 417 (428)
Q Consensus 375 SGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii--TYfA~ 417 (428)
-|-|.. .|.+..+..+|||.++ |++..
T Consensus 207 ------------gGGI~~----~e~~~~~~~~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 207 ------------GFGISK----PEHVKQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp ------------ESCCCS----HHHHHHHHHTTCSEEEECHHHHH
T ss_pred ------------ECCcCC----HHHHHHHHHcCCCEEEEChHHHh
Confidence 344542 2344567778999765 44443
No 11
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=95.33 E-value=0.21 Score=46.00 Aligned_cols=151 Identities=12% Similarity=0.125 Sum_probs=97.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
++++.++.+++.|++.|-+ . .|+..+ .+.|+.++++||++++-+++ +
T Consensus 29 ~~~~~~~al~~gGv~~iel-~-----~k~~~~----------~~~i~~l~~~~~~~~vgagt-v---------------- 75 (214)
T 1wbh_A 29 HAVPMAKALVAGGVRVLNV-T-----LRTECA----------VDAIRAIAKEVPEAIVGAGT-V---------------- 75 (214)
T ss_dssp GHHHHHHHHHHTTCCEEEE-E-----SCSTTH----------HHHHHHHHHHCTTSEEEEES-C----------------
T ss_pred HHHHHHHHHHHcCCCEEEE-e-----CCChhH----------HHHHHHHHHHCcCCEEeeCE-E----------------
Confidence 5889999999999997665 2 243322 34899999999998875543 1
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGD 317 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgD 317 (428)
++|| ++-.-.++|||.|- |.-.|-.|...++. .|- .++ | |
T Consensus 76 -i~~d--------~~~~A~~aGAd~v~-~p~~d~~v~~~~~~---~g~---~~i------------~-----------G- 115 (214)
T 1wbh_A 76 -LNPQ--------QLAEVTEAGAQFAI-SPGLTEPLLKAATE---GTI---PLI------------P-----------G- 115 (214)
T ss_dssp -CSHH--------HHHHHHHHTCSCEE-ESSCCHHHHHHHHH---SSS---CEE------------E-----------E-
T ss_pred -EEHH--------HHHHHHHcCCCEEE-cCCCCHHHHHHHHH---hCC---CEE------------E-----------e-
Confidence 2343 22233467998773 22345444443333 231 000 0 1
Q ss_pred ccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch--HHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhh
Q 014237 318 KKTYQMNPANYREALVEAQADESEGADILLVKPGLPY--LDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQR 394 (428)
Q Consensus 318 RktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y--LDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~ 394 (428)
-.+..|+.+. .+.|||+|.+=|+.+. ++.|+.++..+ ++|+.+ -|-|+.+
T Consensus 116 -------~~t~~e~~~A----~~~Gad~v~~Fpa~~~gG~~~lk~i~~~~~~ipvva---------------iGGI~~~- 168 (214)
T 1wbh_A 116 -------ISTVSELMLG----MDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCP---------------TGGISPA- 168 (214)
T ss_dssp -------ESSHHHHHHH----HHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEEE---------------BSSCCTT-
T ss_pred -------cCCHHHHHHH----HHCCCCEEEEecCccccCHHHHHHHhhhCCCCeEEE---------------ECCCCHH-
Confidence 1245565443 4689999999997766 89999999999 799876 5677765
Q ss_pred HHHHHHHHHHHh-cccEee
Q 014237 395 VMMESLMCLRRA-GADIIL 412 (428)
Q Consensus 395 ~vlEsL~~~kRA-GAd~Ii 412 (428)
.+..+..+ |++.|-
T Consensus 169 ----n~~~~l~agg~~~v~ 183 (214)
T 1wbh_A 169 ----NYRDYLALKSVLCIG 183 (214)
T ss_dssp ----THHHHHTSTTBSCEE
T ss_pred ----HHHHHHhcCCCeEEE
Confidence 44567787 887764
No 12
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.19 E-value=0.4 Score=44.62 Aligned_cols=150 Identities=19% Similarity=0.268 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
++++.++.+++.|++.|-+ . .|++.+ .++|+.++++||++++-+++.|
T Consensus 30 ~~~~~~~al~~gGv~~iel-~-----~k~~~~----------~~~i~~l~~~~~~l~vgaGtvl---------------- 77 (224)
T 1vhc_A 30 DILPLADTLAKNGLSVAEI-T-----FRSEAA----------ADAIRLLRANRPDFLIAAGTVL---------------- 77 (224)
T ss_dssp GHHHHHHHHHHTTCCEEEE-E-----TTSTTH----------HHHHHHHHHHCTTCEEEEESCC----------------
T ss_pred HHHHHHHHHHHcCCCEEEE-e-----ccCchH----------HHHHHHHHHhCcCcEEeeCcEe----------------
Confidence 5899999999999997665 2 233322 3589999999999888776532
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeec-CCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVS-PSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFG 316 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVA-PSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fg 316 (428)
+|| ++-.-.++|||.|- |. .|-.| ++.+- +.|-. ++ | |
T Consensus 78 --~~d--------~~~~A~~aGAd~v~~p~--~d~~v--~~~ar-~~g~~---~i---------------------~--G 116 (224)
T 1vhc_A 78 --TAE--------QVVLAKSSGADFVVTPG--LNPKI--VKLCQ-DLNFP---IT---------------------P--G 116 (224)
T ss_dssp --SHH--------HHHHHHHHTCSEEECSS--CCHHH--HHHHH-HTTCC---EE---------------------C--E
T ss_pred --eHH--------HHHHHHHCCCCEEEECC--CCHHH--HHHHH-HhCCC---EE---------------------e--c
Confidence 232 23334567999873 32 33221 11111 12210 00 0 1
Q ss_pred CccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch--HHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchh
Q 014237 317 DKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY--LDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQ 393 (428)
Q Consensus 317 DRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y--LDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~ 393 (428)
-.+..|+.+. .+.|||+|.+=|+-+. ++.|+.++..+ ++|+++ -|-|+.+
T Consensus 117 --------v~t~~e~~~A----~~~Gad~vk~Fpa~~~gG~~~lk~l~~~~~~ipvva---------------iGGI~~~ 169 (224)
T 1vhc_A 117 --------VNNPMAIEIA----LEMGISAVKFFPAEASGGVKMIKALLGPYAQLQIMP---------------TGGIGLH 169 (224)
T ss_dssp --------ECSHHHHHHH----HHTTCCEEEETTTTTTTHHHHHHHHHTTTTTCEEEE---------------BSSCCTT
T ss_pred --------cCCHHHHHHH----HHCCCCEEEEeeCccccCHHHHHHHHhhCCCCeEEE---------------ECCcCHH
Confidence 2255565432 3689999999997665 89999999999 699865 6777765
Q ss_pred hHHHHHHHHHHHh-cccEee
Q 014237 394 RVMMESLMCLRRA-GADIIL 412 (428)
Q Consensus 394 ~~vlEsL~~~kRA-GAd~Ii 412 (428)
.+..+..+ |++.|-
T Consensus 170 -----N~~~~l~agga~~v~ 184 (224)
T 1vhc_A 170 -----NIRDYLAIPNIVACG 184 (224)
T ss_dssp -----THHHHHTSTTBCCEE
T ss_pred -----HHHHHHhcCCCEEEE
Confidence 34567777 888773
No 13
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=95.14 E-value=0.18 Score=46.98 Aligned_cols=151 Identities=13% Similarity=0.187 Sum_probs=98.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
++++.++.+++.|++.|-+ . .|+..+ .+.|+.++++||++++-+++.
T Consensus 39 ~~~~~~~al~~gGv~~iel-~-----~k~~~~----------~~~i~~l~~~~~~~~igagtv----------------- 85 (225)
T 1mxs_A 39 DILPLADALAAGGIRTLEV-T-----LRSQHG----------LKAIQVLREQRPELCVGAGTV----------------- 85 (225)
T ss_dssp GHHHHHHHHHHTTCCEEEE-E-----SSSTHH----------HHHHHHHHHHCTTSEEEEECC-----------------
T ss_pred HHHHHHHHHHHCCCCEEEE-e-----cCCccH----------HHHHHHHHHhCcccEEeeCeE-----------------
Confidence 4889999999999997665 2 243322 347999999999988865432
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGD 317 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgD 317 (428)
++|| ++-.-.++|||.|= |.-.|-.|...++. .|. . + + | |
T Consensus 86 -l~~d--------~~~~A~~aGAd~v~-~p~~d~~v~~~~~~---~g~---~-----------~-------i---~--G- 125 (225)
T 1mxs_A 86 -LDRS--------MFAAVEAAGAQFVV-TPGITEDILEAGVD---SEI---P-----------L-------L---P--G- 125 (225)
T ss_dssp -CSHH--------HHHHHHHHTCSSEE-CSSCCHHHHHHHHH---CSS---C-----------E-------E---C--E-
T ss_pred -eeHH--------HHHHHHHCCCCEEE-eCCCCHHHHHHHHH---hCC---C-----------E-------E---E--e-
Confidence 1232 22333467999763 22345555444443 331 0 0 0 0 1
Q ss_pred ccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch--HHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhh
Q 014237 318 KKTYQMNPANYREALVEAQADESEGADILLVKPGLPY--LDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQR 394 (428)
Q Consensus 318 RktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y--LDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~ 394 (428)
-.+..|+.+. .+.|||+|.+=|+-+. ++.|+.++..+ ++|+++ -|-|+.++
T Consensus 126 -------~~t~~e~~~A----~~~Gad~vk~FPa~~~~G~~~lk~i~~~~~~ipvva---------------iGGI~~~N 179 (225)
T 1mxs_A 126 -------ISTPSEIMMG----YALGYRRFKLFPAEISGGVAAIKAFGGPFGDIRFCP---------------TGGVNPAN 179 (225)
T ss_dssp -------ECSHHHHHHH----HTTTCCEEEETTHHHHTHHHHHHHHHTTTTTCEEEE---------------BSSCCTTT
T ss_pred -------eCCHHHHHHH----HHCCCCEEEEccCccccCHHHHHHHHhhCCCCeEEE---------------ECCCCHHH
Confidence 2245565433 3689999999996555 79999999999 799876 57777653
Q ss_pred HHHHHHHHHHH-hcccEee
Q 014237 395 VMMESLMCLRR-AGADIIL 412 (428)
Q Consensus 395 ~vlEsL~~~kR-AGAd~Ii 412 (428)
+..+.. +|++.+.
T Consensus 180 -----~~~~l~~~Ga~~v~ 193 (225)
T 1mxs_A 180 -----VRNYMALPNVMCVG 193 (225)
T ss_dssp -----HHHHHHSTTBCCEE
T ss_pred -----HHHHHhccCCEEEE
Confidence 346777 6899874
No 14
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=94.96 E-value=0.22 Score=43.94 Aligned_cols=154 Identities=16% Similarity=0.128 Sum_probs=93.3
Q ss_pred chhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCC-CeEEEeeecccCCCCCCccee
Q 014237 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDGI 232 (428)
Q Consensus 154 s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P-dl~VitDVcLc~YTshGHcGi 232 (428)
+.+ .+.+.++.+.+.|+..+-+--..| -..+.|+.+|+.+| ++.|-.+.+.
T Consensus 20 ~~~-~~~~~~~~~~~~G~~~iev~~~~~----------------~~~~~i~~ir~~~~~~~~ig~~~v~----------- 71 (205)
T 1wa3_A 20 SVE-EAKEKALAVFEGGVHLIEITFTVP----------------DADTVIKELSFLKEKGAIIGAGTVT----------- 71 (205)
T ss_dssp SHH-HHHHHHHHHHHTTCCEEEEETTST----------------THHHHHHHTHHHHHTTCEEEEESCC-----------
T ss_pred CHH-HHHHHHHHHHHCCCCEEEEeCCCh----------------hHHHHHHHHHHHCCCCcEEEecccC-----------
Confidence 454 478888899999999885411101 12467999999887 6655544321
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCC
Q 014237 233 VREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSN 312 (428)
Q Consensus 233 l~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sa 312 (428)
|-+ ++....++|||+| =+..++..+ -+...+. ++++|. |
T Consensus 72 --------~~~-------~~~~a~~~Gad~i-v~~~~~~~~---~~~~~~~---g~~vi~----------g--------- 110 (205)
T 1wa3_A 72 --------SVE-------QCRKAVESGAEFI-VSPHLDEEI---SQFCKEK---GVFYMP----------G--------- 110 (205)
T ss_dssp --------SHH-------HHHHHHHHTCSEE-ECSSCCHHH---HHHHHHH---TCEEEC----------E---------
T ss_pred --------CHH-------HHHHHHHcCCCEE-EcCCCCHHH---HHHHHHc---CCcEEC----------C---------
Confidence 222 2333345999999 555555332 2233333 345552 0
Q ss_pred CCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCc-hHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCC
Q 014237 313 PRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLP-YLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMI 390 (428)
Q Consensus 313 p~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~-YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~i 390 (428)
..+..|+.+. ++-|||+|.+.|+.+ =++.++++++.+ ++|+.+ .|-|
T Consensus 111 ------------~~t~~e~~~a----~~~Gad~vk~~~~~~~g~~~~~~l~~~~~~~pvia---------------~GGI 159 (205)
T 1wa3_A 111 ------------VMTPTELVKA----MKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVP---------------TGGV 159 (205)
T ss_dssp ------------ECSHHHHHHH----HHTTCCEEEETTHHHHHHHHHHHHHTTCTTCEEEE---------------BSSC
T ss_pred ------------cCCHHHHHHH----HHcCCCEEEEcCccccCHHHHHHHHHhCCCCcEEE---------------cCCC
Confidence 0133443332 577999998888532 267788888888 788765 4556
Q ss_pred chhhHHHHHHHHHHHhcccEee
Q 014237 391 DEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 391 D~~~~vlEsL~~~kRAGAd~Ii 412 (428)
+. |.+..+..+|||.+.
T Consensus 160 ~~-----~~~~~~~~~Ga~~v~ 176 (205)
T 1wa3_A 160 NL-----DNVCEWFKAGVLAVG 176 (205)
T ss_dssp CT-----TTHHHHHHHTCSCEE
T ss_pred CH-----HHHHHHHHCCCCEEE
Confidence 54 344567788999875
No 15
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.94 E-value=0.12 Score=45.77 Aligned_cols=136 Identities=22% Similarity=0.289 Sum_probs=86.6
Q ss_pred HHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHH
Q 014237 201 RTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAA 279 (428)
Q Consensus 201 rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~a 279 (428)
+.|+.||+.+|++-|.+|.-+. ++ .++ .+-..+++|||.|.-.+.-. ..+..+.+.
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~-------------~~----~~~------~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~ 98 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIM-------------DG----GHF------ESQLLFDAGADYVTVLGVTDVLTIQSCIRA 98 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEEC-------------SC----HHH------HHHHHHHTTCSEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEEEEec-------------cc----hHH------HHHHHHhcCCCEEEEeCCCChhHHHHHHHH
Confidence 6899999999998875553331 11 222 13345789999887655543 556777777
Q ss_pred HHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCC-------
Q 014237 280 LDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGL------- 352 (428)
Q Consensus 280 LD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal------- 352 (428)
+.+.|. ++.+ . +.+| .+..|.++++ .+.|+|+|.|-|+.
T Consensus 99 ~~~~g~-~~~v-~--------~~~~---------------------~t~~~~~~~~---~~~g~d~i~v~~g~~g~~~~~ 144 (211)
T 3f4w_A 99 AKEAGK-QVVV-D--------MICV---------------------DDLPARVRLL---EEAGADMLAVHTGTDQQAAGR 144 (211)
T ss_dssp HHHHTC-EEEE-E--------CTTC---------------------SSHHHHHHHH---HHHTCCEEEEECCHHHHHTTC
T ss_pred HHHcCC-eEEE-E--------ecCC---------------------CCHHHHHHHH---HHcCCCEEEEcCCCcccccCC
Confidence 877774 3322 1 1111 1333444444 35799999998762
Q ss_pred chHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 353 PYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 353 ~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
.-++.++++|+.+ ++|+.+ +| -|+. |.+..+..+|||.|+.
T Consensus 145 ~~~~~i~~l~~~~~~~~i~~---~g------------GI~~-----~~~~~~~~~Gad~vvv 186 (211)
T 3f4w_A 145 KPIDDLITMLKVRRKARIAV---AG------------GISS-----QTVKDYALLGPDVVIV 186 (211)
T ss_dssp CSHHHHHHHHHHCSSCEEEE---ES------------SCCT-----TTHHHHHTTCCSEEEE
T ss_pred CCHHHHHHHHHHcCCCcEEE---EC------------CCCH-----HHHHHHHHcCCCEEEE
Confidence 1478999999987 788854 33 3442 4556778899999874
No 16
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=94.57 E-value=1.8 Score=41.57 Aligned_cols=103 Identities=20% Similarity=0.263 Sum_probs=70.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHH------------------HHHHHHHHCCC--eEEEe
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPR------------------TIWLLKDRYPD--LVIYT 217 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~r------------------AIr~iK~~~Pd--l~Vit 217 (428)
..++.++.+.+.|..-|-| |+ | .-|+.. ||++.| .++.+|+.+++ +++++
T Consensus 35 ~~~~~~~~l~~~GaD~iEl-Gi-P--fSDP~a------DGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~ 104 (271)
T 3nav_A 35 QSLAIMQTLIDAGADALEL-GM-P--FSDPLA------DGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLM 104 (271)
T ss_dssp HHHHHHHHHHHTTCSSEEE-EC-C--CCCGGG------CCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEE-CC-C--CCCCCC------CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 4788899999999988776 84 6 356644 577665 57778877665 44443
Q ss_pred eecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceee
Q 014237 218 DVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIM 291 (428)
Q Consensus 218 DVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IM 291 (428)
... .+..-| + .+-+-..++||+|.|--.|+=.......+++++++|...+.++
T Consensus 105 Y~n-----------~v~~~g-------~---~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lv 157 (271)
T 3nav_A 105 YAN-----------LVYARG-------I---DDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIA 157 (271)
T ss_dssp CHH-----------HHHHTC-------H---HHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEE
T ss_pred cCc-----------HHHHHh-------H---HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 222 111112 1 3334456789999966668877889999999999999877777
No 17
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=94.51 E-value=0.73 Score=43.29 Aligned_cols=151 Identities=13% Similarity=0.178 Sum_probs=89.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHH------------------HHHHHHHHCCCeEEEeee
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPR------------------TIWLLKDRYPDLVIYTDV 219 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~r------------------AIr~iK~~~Pdl~VitDV 219 (428)
..++.++.+.+.|+..|.| |+ |- -|+. . ||++.+ .++.+|+.+|++-|+.
T Consensus 32 ~~~~~~~~l~~~G~D~IEl-G~-P~--sdP~-----a-dgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~-- 99 (262)
T 2ekc_A 32 TSLKAFKEVLKNGTDILEI-GF-PF--SDPV-----A-DGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLL-- 99 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEE-EC-CC--SCCT-----T-SCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEE--
T ss_pred HHHHHHHHHHHcCCCEEEE-CC-CC--CCcc-----c-ccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEE--
Confidence 4688889999999999888 74 52 2321 1 455443 3899999887654433
Q ss_pred cccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCC-eecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhc
Q 014237 220 ALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGAD-VVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYA 298 (428)
Q Consensus 220 cLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGAD-iVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyA 298 (428)
+ .|. ..+...| ++. -+-..+++|+| ++.| |+-...+...++.+.++|+.-+.+++-+
T Consensus 100 -m-~y~-----n~v~~~g-------~~~---f~~~~~~aG~dgvii~-dl~~ee~~~~~~~~~~~gl~~i~l~~p~---- 157 (262)
T 2ekc_A 100 -M-TYY-----NPIFRIG-------LEK---FCRLSREKGIDGFIVP-DLPPEEAEELKAVMKKYVLSFVPLGAPT---- 157 (262)
T ss_dssp -E-CCH-----HHHHHHC-------HHH---HHHHHHHTTCCEEECT-TCCHHHHHHHHHHHHHTTCEECCEECTT----
T ss_pred -E-ecC-----cHHHHhh-------HHH---HHHHHHHcCCCEEEEC-CCCHHHHHHHHHHHHHcCCcEEEEeCCC----
Confidence 1 220 0000001 122 23335689999 5555 7777788889999999997555544322
Q ss_pred cccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecC--------C--CchHHHHHHHHhhCCCC
Q 014237 299 SSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKP--------G--LPYLDVIRLLRDKYPLP 368 (428)
Q Consensus 299 SafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKP--------a--l~YLDII~~vk~~~~lP 368 (428)
...|=++++... .+|-..++--. . ..-.+.|+++|+.+++|
T Consensus 158 ----------------------------t~~~rl~~ia~~-a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~p 208 (262)
T 2ekc_A 158 ----------------------------STRKRIKLICEA-ADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKP 208 (262)
T ss_dssp ----------------------------CCHHHHHHHHHH-CSSCEEEESSCC---------CHHHHHHHHHHHHHCCSC
T ss_pred ----------------------------CCHHHHHHHHHh-CCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCC
Confidence 222334444433 34543222111 1 11348999999999999
Q ss_pred eEE
Q 014237 369 IAA 371 (428)
Q Consensus 369 vaa 371 (428)
+++
T Consensus 209 v~v 211 (262)
T 2ekc_A 209 VVV 211 (262)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 18
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=94.17 E-value=0.31 Score=46.47 Aligned_cols=167 Identities=19% Similarity=0.216 Sum_probs=109.6
Q ss_pred CCCCceeechhhhHHHHHHHHHHcCCCeEEEeec-CCCCCCCcccCcCcCCCCCH-----HHHHHHHHHHCCCeEEEeee
Q 014237 146 AMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPK-VPDALKSPTGDEAYNDNGLV-----PRTIWLLKDRYPDLVIYTDV 219 (428)
Q Consensus 146 SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgv-i~~~~KD~~Gs~A~~~~g~v-----~rAIr~iK~~~Pdl~VitDV 219 (428)
.|||+|=+..- .+ +.+.|++.+++=+- +. .+..+.+-+++ ...++.|.+..+ +-|++|.
T Consensus 23 ~~~~ayD~~sA-~~------~~~aG~dai~vg~~s~a-------~~~G~pD~~~vt~~em~~~~~~I~r~~~-~pviaD~ 87 (255)
T 2qiw_A 23 VLPTVWDTWSA-GL------VEEAGFSGLTIGSHPVA-------DATGSSDGENMNFADYMAVVKKITSAVS-IPVSVDV 87 (255)
T ss_dssp ECCEESSHHHH-HH------HHHTTCSCEEECHHHHH-------HHTTCCTTTCSCHHHHHHHHHHHHHHCS-SCEEEEC
T ss_pred EEecCcCHHHH-HH------HHHcCCCEEEEChHHHH-------HhCCCCCCCCcCHHHHHHHHHHHHhcCC-CCEEecc
Confidence 38888765442 23 33479999887321 11 02233333333 356677777765 8899997
Q ss_pred cccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC-------------CCchHHHHHHHHHHCCCC
Q 014237 220 ALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM-------------MDGRVGAIRAALDAEGFQ 286 (428)
Q Consensus 220 cLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM-------------MDGRV~aIR~aLD~~Gf~ 286 (428)
=.- | -|.. .+.+..+.++||+.|--.|= |=.+|.+++++.++.|.
T Consensus 88 ~~G-y---------------g~~~-----~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~- 145 (255)
T 2qiw_A 88 ESG-Y---------------GLSP-----ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGV- 145 (255)
T ss_dssp TTC-T---------------TCCH-----HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCC-c---------------CcHH-----HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCC-
Confidence 443 3 1111 45555666799999987775 44678888888777674
Q ss_pred CceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCC
Q 014237 287 HVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYP 366 (428)
Q Consensus 287 ~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~ 366 (428)
+.-|++-.--+ ..+. +| +....+|+|+.+..=.+-|||+|++ |+.+-.|.++++.+.++
T Consensus 146 ~~~v~aRtd~~----------~~g~----~~------~~~~~~~ai~ra~a~~eAGAd~i~~-e~~~~~~~~~~i~~~~~ 204 (255)
T 2qiw_A 146 DVVINGRTDAV----------KLGA----DV------FEDPMVEAIKRIKLMEQAGARSVYP-VGLSTAEQVERLVDAVS 204 (255)
T ss_dssp CCEEEEEECHH----------HHCT----TT------SSSHHHHHHHHHHHHHHHTCSEEEE-CCCCSHHHHHHHHTTCS
T ss_pred CeEEEEEechh----------hccC----Cc------chHHHHHHHHHHHHHHHcCCcEEEE-cCCCCHHHHHHHHHhCC
Confidence 56677765543 1110 11 0123688999998888899999999 88888999999999999
Q ss_pred CCeE
Q 014237 367 LPIA 370 (428)
Q Consensus 367 lPva 370 (428)
+|+-
T Consensus 205 ~P~n 208 (255)
T 2qiw_A 205 VPVN 208 (255)
T ss_dssp SCBE
T ss_pred CCEE
Confidence 9994
No 19
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=94.17 E-value=0.39 Score=49.54 Aligned_cols=150 Identities=20% Similarity=0.203 Sum_probs=93.1
Q ss_pred HHHHHHHHcCCCeecCCCCC--------------------CchHHHHHHHHHHCCCCCceeechhhhhccccccch---h
Q 014237 250 KQAVSQARAGADVVSPSDMM--------------------DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF---R 306 (428)
Q Consensus 250 k~Als~A~AGADiVAPSDMM--------------------DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF---R 306 (428)
+..-.+.+|||--|--.|-. =.||.|+|.+.|..|- +..|++-.=-.+..+..-= |
T Consensus 164 rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~-d~vIiARTDA~~a~l~~s~~d~r 242 (433)
T 3eol_A 164 EIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGT-PTLIVARTDAEAAKLLTSDIDER 242 (433)
T ss_dssp HHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTC-CCEEEEEECTTTCCEESCCCSTT
T ss_pred HHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCC-CEEEEEEcCCccccccccCcccc
Confidence 34445677887666555543 2489999999988784 6788876543332111100 0
Q ss_pred hhhcCCCCC--CCcc---ccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhh----CCCCeEEEEechH
Q 014237 307 EALDSNPRF--GDKK---TYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDK----YPLPIAAYQVSGE 377 (428)
Q Consensus 307 dAa~Sap~f--gDRk---tYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~----~~lPvaaYqVSGE 377 (428)
|-- .-. |.|. -|+.. ...+|||+.+..=.+ |||+|++.|..+=++-|+++.+. +++++.+|+-|-.
T Consensus 243 d~~---fl~g~g~r~~eG~y~~~-~gld~AI~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~~~P~~~L~~~~sPs 317 (433)
T 3eol_A 243 DQP---FVDYEAGRTAEGFYQVK-NGIEPCIARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHKAHPGKLLAYNCSPS 317 (433)
T ss_dssp TGG---GBCSSSCBCTTCCEEBC-CSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHSTTCCEEEECCSS
T ss_pred ccc---ceeccCccccccccccc-CCHHHHHHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcccCCCcccccCCCCC
Confidence 000 000 1121 13332 347999999886665 99999999998888888877654 5678899999888
Q ss_pred HHHHHHHHHCCCCchhhHHHHHH-HHHHHhcccEeeh
Q 014237 378 YSMIKAGGALKMIDEQRVMMESL-MCLRRAGADIILT 413 (428)
Q Consensus 378 YaMIkaAa~~G~iD~~~~vlEsL-~~~kRAGAd~IiT 413 (428)
|.+.+. ++.+. +++. .-+..+|..+|+-
T Consensus 318 fnw~~~------~~~~~--~~~f~~eLa~lGv~~v~~ 346 (433)
T 3eol_A 318 FNWKKN------LDDAT--IAKFQRELGAMGYKFQFI 346 (433)
T ss_dssp SCHHHH------SCHHH--HHHHHHHHHHHTEEEEEE
T ss_pred Cccccc------CChhH--HhHHHHHHHHcCCeEEEe
Confidence 877553 34332 2332 5667778777663
No 20
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=93.97 E-value=0.65 Score=45.69 Aligned_cols=155 Identities=17% Similarity=0.179 Sum_probs=104.3
Q ss_pred HHHcCCCeEEE--eecCCCCCCCcccCcCcCCCCC-----HHHHHHHHHHHCC-CeEEEeeecccCCCCCCcceeecCCC
Q 014237 166 ARDVGVNSVVL--FPKVPDALKSPTGDEAYNDNGL-----VPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 166 ~~~~GI~sv~L--Fgvi~~~~KD~~Gs~A~~~~g~-----v~rAIr~iK~~~P-dl~VitDVcLc~YTshGHcGil~~~g 237 (428)
+.+.|++.+.+ ++. .. ....+.+.++ +..-++.|.+..+ ++-|++|.=. |
T Consensus 41 ~e~aGf~ai~vsG~~~-a~------s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~---------------G 98 (307)
T 3lye_A 41 AMELGFKSLYMTGAGT-TA------SRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDT---------------G 98 (307)
T ss_dssp HHHTTCSCEEECHHHH-HH------HHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTT---------------C
T ss_pred HHHcCCCEEEeccHHH-HH------HhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCC---------------C
Confidence 44579999988 222 10 0112333333 2345677777666 7889999632 2
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-------------------chHHHHHHHHHHCCCCCceeechhhhhc
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-------------------GRVGAIRAALDAEGFQHVSIMSYTAKYA 298 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-------------------GRV~aIR~aLD~~Gf~~v~IMSYsaKyA 298 (428)
+- |.+ ...+.+-.+.++||+.|--.|-.- .||.|.|++-++.| .+.-|++-.--|+
T Consensus 99 yg-~~~---~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~-~d~~I~ARTDa~~ 173 (307)
T 3lye_A 99 YG-GPI---MVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLR-SDFVLIARTDALQ 173 (307)
T ss_dssp SS-SHH---HHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTT-CCCEEEEEECCHH
T ss_pred CC-CHH---HHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC-CCeEEEEechhhh
Confidence 21 222 234445556789999887776531 57888888887777 5788887765443
Q ss_pred cccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCC-CCeEEEEe
Q 014237 299 SSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYP-LPIAAYQV 374 (428)
Q Consensus 299 SafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~-lPvaaYqV 374 (428)
. ..-+|||+.+..=.+-|||+|++ |++.-.|-|+++.+.++ +|+.+=.+
T Consensus 174 ~--------------------------~gldeAi~Ra~ay~eAGAD~ifi-~~~~~~~~~~~i~~~~~~~Pv~~n~~ 223 (307)
T 3lye_A 174 S--------------------------LGYEECIERLRAARDEGADVGLL-EGFRSKEQAAAAVAALAPWPLLLNSV 223 (307)
T ss_dssp H--------------------------HCHHHHHHHHHHHHHTTCSEEEE-CCCSCHHHHHHHHHHHTTSCBEEEEE
T ss_pred c--------------------------cCHHHHHHHHHHHHHCCCCEEEe-cCCCCHHHHHHHHHHccCCceeEEee
Confidence 2 03789999999999999999999 58888999999999885 99965434
No 21
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=93.90 E-value=1.2 Score=41.98 Aligned_cols=151 Identities=16% Similarity=0.198 Sum_probs=96.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
.+++.++.+++.|++.|=+ . .+++. -.++|+.|+++||+++|-+ |
T Consensus 47 ~a~~~a~al~~gGi~~iEv-t-----~~t~~----------a~e~I~~l~~~~~~~~iGa-------------------G 91 (232)
T 4e38_A 47 DIIPLGKVLAENGLPAAEI-T-----FRSDA----------AVEAIRLLRQAQPEMLIGA-------------------G 91 (232)
T ss_dssp GHHHHHHHHHHTTCCEEEE-E-----TTSTT----------HHHHHHHHHHHCTTCEEEE-------------------E
T ss_pred HHHHHHHHHHHCCCCEEEE-e-----CCCCC----------HHHHHHHHHHhCCCCEEeE-------------------C
Confidence 5899999999999998776 2 12221 2379999999999987754 2
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGD 317 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgD 317 (428)
.|.+- +++-...+||||+|.-.. .|-.| ..|+.++ .-.|-|
T Consensus 92 TVlt~-------~~a~~Ai~AGA~fIvsP~-~~~~v-----------------i~~~~~~-gi~~ip------------- 132 (232)
T 4e38_A 92 TILNG-------EQALAAKEAGATFVVSPG-FNPNT-----------------VRACQEI-GIDIVP------------- 132 (232)
T ss_dssp CCCSH-------HHHHHHHHHTCSEEECSS-CCHHH-----------------HHHHHHH-TCEEEC-------------
T ss_pred CcCCH-------HHHHHHHHcCCCEEEeCC-CCHHH-----------------HHHHHHc-CCCEEc-------------
Confidence 23322 345556789999885322 23222 2221111 111111
Q ss_pred ccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch--HHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhh
Q 014237 318 KKTYQMNPANYREALVEAQADESEGADILLVKPGLPY--LDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQR 394 (428)
Q Consensus 318 RktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y--LDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~ 394 (428)
+-.+..|+++. ++-|||+|.+=|+.+. ++.|+.++.-+ ++|+.+ -|-|+.+
T Consensus 133 ------Gv~TptEi~~A----~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~ip~~p---------------tGGI~~~- 186 (232)
T 4e38_A 133 ------GVNNPSTVEAA----LEMGLTTLKFFPAEASGGISMVKSLVGPYGDIRLMP---------------TGGITPS- 186 (232)
T ss_dssp ------EECSHHHHHHH----HHTTCCEEEECSTTTTTHHHHHHHHHTTCTTCEEEE---------------BSSCCTT-
T ss_pred ------CCCCHHHHHHH----HHcCCCEEEECcCccccCHHHHHHHHHHhcCCCeee---------------EcCCCHH-
Confidence 01255666655 5789999999998776 79999999988 588875 4556643
Q ss_pred HHHHHHHHHHHhcccEee
Q 014237 395 VMMESLMCLRRAGADIIL 412 (428)
Q Consensus 395 ~vlEsL~~~kRAGAd~Ii 412 (428)
.+..+..+||...+
T Consensus 187 ----n~~~~l~aGa~~~v 200 (232)
T 4e38_A 187 ----NIDNYLAIPQVLAC 200 (232)
T ss_dssp ----THHHHHTSTTBCCE
T ss_pred ----HHHHHHHCCCeEEE
Confidence 44566677877544
No 22
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=93.86 E-value=0.41 Score=47.84 Aligned_cols=89 Identities=25% Similarity=0.238 Sum_probs=52.1
Q ss_pred HHHHHHHHHcCCCeecC-------------CCCCC--chHHHHHHHHHHCCCCCceeechhhhhccccccchh-------
Q 014237 249 CKQAVSQARAGADVVSP-------------SDMMD--GRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFR------- 306 (428)
Q Consensus 249 ak~Als~A~AGADiVAP-------------SDMMD--GRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFR------- 306 (428)
++||..+.++||+.|.= +..|. -.|.+||++ .++||| +|.--.++-+.+
T Consensus 27 ~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~I~~a------v~iPV~---~K~rig~~~e~qilea~Ga 97 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDA------VSIPVM---AKCRIGHTTEALVLEAIGV 97 (330)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHH------CSSCEE---EEEETTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHHHHHh------cCCCeE---EEEeecchHHHHHHHHcCC
Confidence 66899999999999910 11222 245555542 368888 454333322222
Q ss_pred hhhcC----CCC----CCCccccCC----CCCChHHHHHHHHhchhcCCceEEecC
Q 014237 307 EALDS----NPR----FGDKKTYQM----NPANYREALVEAQADESEGADILLVKP 350 (428)
Q Consensus 307 dAa~S----ap~----fgDRktYQm----dpaN~~EAlrE~~lDi~EGADilMVKP 350 (428)
|+++. +|. .-+|+.|.. +-.|..||+|.+ +||||||-+|.
T Consensus 98 D~Id~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~----~~Ga~~i~t~g 149 (330)
T 2yzr_A 98 DMIDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI----WEGAAMIRTKG 149 (330)
T ss_dssp SEEEEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH----HHTCSEEEECC
T ss_pred CEEehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH----hcCcceeeccC
Confidence 11111 111 123444443 346888988876 79999999999
No 23
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=93.78 E-value=1.2 Score=40.60 Aligned_cols=149 Identities=19% Similarity=0.216 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
++++.++.+.+.|++.|=| . .|+.. ..+.|+.+++ |++++-+++.+
T Consensus 26 ~~~~~~~~l~~gGv~~iel-~-----~k~~~----------~~~~i~~~~~--~~~~~gag~vl---------------- 71 (207)
T 2yw3_A 26 DLLGLARVLEEEGVGALEI-T-----LRTEK----------GLEALKALRK--SGLLLGAGTVR---------------- 71 (207)
T ss_dssp CHHHHHHHHHHTTCCEEEE-E-----CSSTH----------HHHHHHHHTT--SSCEEEEESCC----------------
T ss_pred HHHHHHHHHHHcCCCEEEE-e-----CCChH----------HHHHHHHHhC--CCCEEEeCeEe----------------
Confidence 4889999999999997755 2 23221 2467888888 87776554422
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGD 317 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgD 317 (428)
+|| . +-.-.++|||.|- +.-.|-.+...++. .|.. +.| |
T Consensus 72 --~~d-~-------~~~A~~~GAd~v~-~~~~d~~v~~~~~~---~g~~---------------~i~-----------G- 110 (207)
T 2yw3_A 72 --SPK-E-------AEAALEAGAAFLV-SPGLLEEVAALAQA---RGVP---------------YLP-----------G- 110 (207)
T ss_dssp --SHH-H-------HHHHHHHTCSEEE-ESSCCHHHHHHHHH---HTCC---------------EEE-----------E-
T ss_pred --eHH-H-------HHHHHHcCCCEEE-cCCCCHHHHHHHHH---hCCC---------------EEe-----------c-
Confidence 232 2 2223457999874 33456555444433 3310 000 1
Q ss_pred ccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch--HHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhh
Q 014237 318 KKTYQMNPANYREALVEAQADESEGADILLVKPGLPY--LDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQR 394 (428)
Q Consensus 318 RktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y--LDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~ 394 (428)
..|..|+.+. .+.|||+|.+=|+-+. ++.|+.++..+ ++|+.+ -|-|+.+
T Consensus 111 -------~~t~~e~~~A----~~~Gad~v~~fpa~~~gG~~~lk~l~~~~~~ipvva---------------iGGI~~~- 163 (207)
T 2yw3_A 111 -------VLTPTEVERA----LALGLSALKFFPAEPFQGVRVLRAYAEVFPEVRFLP---------------TGGIKEE- 163 (207)
T ss_dssp -------ECSHHHHHHH----HHTTCCEEEETTTTTTTHHHHHHHHHHHCTTCEEEE---------------BSSCCGG-
T ss_pred -------CCCHHHHHHH----HHCCCCEEEEecCccccCHHHHHHHHhhCCCCcEEE---------------eCCCCHH-
Confidence 1255666444 3569999999997655 68899999999 799876 5677754
Q ss_pred HHHHHHHHHHHhcccEee
Q 014237 395 VMMESLMCLRRAGADIIL 412 (428)
Q Consensus 395 ~vlEsL~~~kRAGAd~Ii 412 (428)
.+..+..+||+.+.
T Consensus 164 ----n~~~~l~aGa~~va 177 (207)
T 2yw3_A 164 ----HLPHYAALPNLLAV 177 (207)
T ss_dssp ----GHHHHHTCSSBSCE
T ss_pred ----HHHHHHhCCCcEEE
Confidence 45568899999865
No 24
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=93.27 E-value=1 Score=43.47 Aligned_cols=173 Identities=20% Similarity=0.242 Sum_probs=105.7
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEeec-CCCCCCCcccCcCcCCCCCH-----HHHHHHHHHHCCCeEEEeeec
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPK-VPDALKSPTGDEAYNDNGLV-----PRTIWLLKDRYPDLVIYTDVA 220 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgv-i~~~~KD~~Gs~A~~~~g~v-----~rAIr~iK~~~Pdl~VitDVc 220 (428)
|||+|=... .+-+.+.|++.+.+=|- +. .+..+.+.+++ ...++.|.+..+ +-|++|.=
T Consensus 20 ~~~a~D~~s-------A~~~~~aG~~ai~vsg~s~a-------~~~G~pD~~~vt~~em~~~~~~I~~~~~-~pviaD~d 84 (275)
T 2ze3_A 20 LPNAWDVAS-------ARLLEAAGFTAIGTTSAGIA-------HARGRTDGQTLTRDEMGREVEAIVRAVA-IPVNADIE 84 (275)
T ss_dssp ECEESSHHH-------HHHHHHHTCSCEEECHHHHH-------HHSCCCSSSSSCHHHHHHHHHHHHHHCS-SCEEEECT
T ss_pred EecccCHHH-------HHHHHHcCCCEEEECcHHHH-------HhCCCCCCCCCCHHHHHHHHHHHHhhcC-CCEEeecC
Confidence 677754432 12233469999887431 11 02233333333 356677777765 67888863
Q ss_pred ccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC-------------CCchHHHHHHHHHHCCCCC
Q 014237 221 LDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM-------------MDGRVGAIRAALDAEGFQH 287 (428)
Q Consensus 221 Lc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM-------------MDGRV~aIR~aLD~~Gf~~ 287 (428)
.- | =++-+ ...+.+-.+.++||+.|--.|= |=.||.+++++.+..|- +
T Consensus 85 ~G-y--------------g~~~~---~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~-~ 145 (275)
T 2ze3_A 85 AG-Y--------------GHAPE---DVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGV-P 145 (275)
T ss_dssp TC-S--------------SSSHH---HHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTS-C
T ss_pred CC-C--------------CCCHH---HHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCC-C
Confidence 32 2 12222 2334445566799998877664 34688888888887774 4
Q ss_pred ceeechhhhhccccccchhhhhcCCCCCCCccccCCCC-CChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCC
Q 014237 288 VSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNP-ANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYP 366 (428)
Q Consensus 288 v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdp-aN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~ 366 (428)
.-|++-+--|... .|+| + ...+|+|+.+..=.+-|||+|++ |+.+-.|.++++.+.++
T Consensus 146 ~~i~aRtda~~~~--------------~g~~------~~~~~~~ai~Ra~ay~eAGAd~i~~-e~~~~~~~~~~i~~~~~ 204 (275)
T 2ze3_A 146 VFLNARTDTFLKG--------------HGAT------DEERLAETVRRGQAYADAGADGIFV-PLALQSQDIRALADALR 204 (275)
T ss_dssp CEEEEECCTTTTT--------------CSSS------HHHHHHHHHHHHHHHHHTTCSEEEC-TTCCCHHHHHHHHHHCS
T ss_pred eEEEEechhhhcc--------------cccc------chhhHHHHHHHHHHHHHCCCCEEEE-CCCCCHHHHHHHHHhcC
Confidence 5555544333221 1221 1 12577888887767779999988 56888999999999999
Q ss_pred CCeEEEEec
Q 014237 367 LPIAAYQVS 375 (428)
Q Consensus 367 lPvaaYqVS 375 (428)
+|+- +..+
T Consensus 205 ~P~n-~~~~ 212 (275)
T 2ze3_A 205 VPLN-VMAF 212 (275)
T ss_dssp SCEE-EECC
T ss_pred CCEE-EecC
Confidence 9983 5443
No 25
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=93.23 E-value=0.89 Score=44.68 Aligned_cols=189 Identities=16% Similarity=0.241 Sum_probs=117.8
Q ss_pred HHHcCCCeEEEee--cCCCCCCCcccCcCcCCCCCH-----HHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCc
Q 014237 166 ARDVGVNSVVLFP--KVPDALKSPTGDEAYNDNGLV-----PRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (428)
Q Consensus 166 ~~~~GI~sv~LFg--vi~~~~KD~~Gs~A~~~~g~v-----~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~ 238 (428)
+.+.|++.+.+=| . .. ....+.+.+++ ..-++.|.+..+++-|++|.=. |+
T Consensus 34 ~e~aGf~ai~vsG~~~-a~------~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~---------------Gy 91 (302)
T 3fa4_A 34 ALSAGFDALYMTGAGT-AA------SVHGQADLGICTLNDMRANAEMISNISPSTPVIADADT---------------GY 91 (302)
T ss_dssp HHTTTCSCEEECHHHH-HH------HHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTT---------------TT
T ss_pred HHHcCCCEEEeCcHHH-HH------HHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCC---------------CC
Confidence 4457999988832 2 10 01223333432 2456677776678999999632 22
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeecCCCCC-------------------CchHHHHHHHHHHCCCCCceeechhhhhcc
Q 014237 239 IMNDETVHQLCKQAVSQARAGADVVSPSDMM-------------------DGRVGAIRAALDAEGFQHVSIMSYTAKYAS 299 (428)
Q Consensus 239 IdND~Tl~~Lak~Als~A~AGADiVAPSDMM-------------------DGRV~aIR~aLD~~Gf~~v~IMSYsaKyAS 299 (428)
- |.+ ...+.+-.+.++||+.|--.|-. =+||.|.|++-++.| .++-|++-+=-|+.
T Consensus 92 g-~~~---~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~-~d~~I~ARTDa~~~ 166 (302)
T 3fa4_A 92 G-GPI---MVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIG-SDIVVIARTDSLQT 166 (302)
T ss_dssp S-SHH---HHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHT-CCCEEEEEECCHHH
T ss_pred C-CHH---HHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC-CCEEEEEEeccccc
Confidence 1 222 23445556678999988776653 147777777777666 57888887643421
Q ss_pred ccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhC-CCCeEEEEec-hH
Q 014237 300 SFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKY-PLPIAAYQVS-GE 377 (428)
Q Consensus 300 afYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~-~lPvaaYqVS-GE 377 (428)
..-+|||+.+..=.+-|||+|++ |++.-.|-|+++.+.+ ++|+.+=.+. |.
T Consensus 167 --------------------------~gldeAi~Ra~ay~eAGAD~ifi-~g~~~~~ei~~~~~~~~~~Pl~~n~~~~g~ 219 (302)
T 3fa4_A 167 --------------------------HGYEESVARLRAARDAGADVGFL-EGITSREMARQVIQDLAGWPLLLNMVEHGA 219 (302)
T ss_dssp --------------------------HCHHHHHHHHHHHHTTTCSEEEE-TTCCCHHHHHHHHHHTTTSCEEEECCTTSS
T ss_pred --------------------------CCHHHHHHHHHHHHHcCCCEEee-cCCCCHHHHHHHHHHhcCCceeEEEecCCC
Confidence 03789999999999999999999 7888899999999988 4898653332 32
Q ss_pred HH--HHHHHHHCCCC----------chhhHHHHHHHHHHHhcc
Q 014237 378 YS--MIKAGGALKMI----------DEQRVMMESLMCLRRAGA 408 (428)
Q Consensus 378 Ya--MIkaAa~~G~i----------D~~~~vlEsL~~~kRAGA 408 (428)
+- -.+.-++.|+= ---..+.+.+..|++.|-
T Consensus 220 ~p~~~~~eL~~lGv~~v~~~~~~~raa~~A~~~~~~~i~~~g~ 262 (302)
T 3fa4_A 220 TPSISAAEAKEMGFRIIIFPFAALGPAVAAMREAMEKLKRDGI 262 (302)
T ss_dssp SCCCCHHHHHHHTCSEEEETTTTHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCCCHHHHHHcCCCEEEEchHHHHHHHHHHHHHHHHHHHcCC
Confidence 21 12333344430 012356666667776653
No 26
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=93.14 E-value=0.66 Score=47.94 Aligned_cols=149 Identities=21% Similarity=0.237 Sum_probs=91.2
Q ss_pred HHHHHHHHcCCCeecCCCCC--------------------CchHHHHHHHHHHCCCCCceeechhhhhc----cccccch
Q 014237 250 KQAVSQARAGADVVSPSDMM--------------------DGRVGAIRAALDAEGFQHVSIMSYTAKYA----SSFYGPF 305 (428)
Q Consensus 250 k~Als~A~AGADiVAPSDMM--------------------DGRV~aIR~aLD~~Gf~~v~IMSYsaKyA----SafYGPF 305 (428)
+..-.+++|||--|--.|-. =+||.|+|++.|..|- +.-|++-+=-.+ ++=--|
T Consensus 171 ~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~-d~~IiARTDa~aa~l~~s~~d~- 248 (435)
T 3lg3_A 171 ELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGV-PTLLIARTDADAADLLTSDCDP- 248 (435)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTC-CCEEEEEECTTTCCEESCCCCG-
T ss_pred HHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCC-CeEEEEEcCCcccccccccccc-
Confidence 33445677888766655543 2489999999988884 677776543222 211111
Q ss_pred hhhhcCCCCCCCcc---ccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhh----CCCCeEEEEechHH
Q 014237 306 REALDSNPRFGDKK---TYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDK----YPLPIAAYQVSGEY 378 (428)
Q Consensus 306 RdAa~Sap~fgDRk---tYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~----~~lPvaaYqVSGEY 378 (428)
||- ..-.|.|. -|+.. ...+|||+.+..=.+ |||+|++.|+.+=++-|+++.+. +++.+.+|+-|-.|
T Consensus 249 rD~---~fi~G~r~~eG~y~~~-~gld~AI~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~~~P~~~La~~~sPsf 323 (435)
T 3lg3_A 249 YDR---EFITGDRTAEGFFRTR-AGIEQAISRGLAYAP-YADLVWCETSTPDLALAKRFADAVHAQFPGKLLAYNCSPSF 323 (435)
T ss_dssp GGG---GGEEEEECTTCCEEEC-CSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSS
T ss_pred ccc---hhhccccccccccccc-CCHHHHHHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhccccCCeEEEeCCCCCc
Confidence 000 00001121 13333 357899998886665 99999999999888888876654 56788999999876
Q ss_pred HHHHHHHHCCCCchhhHHHHHHHHHHHhcccEee
Q 014237 379 SMIKAGGALKMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 379 aMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
.=-+. ++.+ -+-....-+.++|..++|
T Consensus 324 nw~~~------~~d~-~~~~f~~eLa~lG~~~v~ 350 (435)
T 3lg3_A 324 NWKKN------LTDQ-QIASFQDELSAMGYKYQF 350 (435)
T ss_dssp CHHHH------SCHH-HHHHHHHHHHHTTEEEEE
T ss_pred ccccc------CCHH-HHHHHHHHHHHcCCcEEE
Confidence 43221 2322 233334567778888776
No 27
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=92.45 E-value=0.34 Score=45.07 Aligned_cols=172 Identities=12% Similarity=0.128 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
...+.++.+.+.|...+.. + + ...|+.||+.. ++=|+.... .-|. ||..++
T Consensus 37 ~~~~~A~a~~~~Ga~~i~~-~-----------~---------~~~i~~ir~~v-~~Pvig~~k-~~~~--~~~~~I---- 87 (229)
T 3q58_A 37 IVAAMAQAAASAGAVAVRI-E-----------G---------IENLRTVRPHL-SVPIIGIIK-RDLT--GSPVRI---- 87 (229)
T ss_dssp HHHHHHHHHHHTTCSEEEE-E-----------S---------HHHHHHHGGGC-CSCEEEECB-CCCS--SCCCCB----
T ss_pred hHHHHHHHHHHCCCcEEEE-C-----------C---------HHHHHHHHHhc-CCCEEEEEe-ecCC--CCceEe----
Confidence 4777788888899998765 1 1 45789999886 566665422 2232 122223
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCC---CchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMM---DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPR 314 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPSDMM---DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~ 314 (428)
++|++ ++....++|||+|...--. +..+..+-+.+.+.| +.+|.
T Consensus 88 ----~~~~~----~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g---~~v~~---------------------- 134 (229)
T 3q58_A 88 ----TPYLQ----DVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHG---LLAMA---------------------- 134 (229)
T ss_dssp ----SCSHH----HHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT---CEEEE----------------------
T ss_pred ----CccHH----HHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCC---CEEEE----------------------
Confidence 22433 3334578999999742211 134444444444443 44552
Q ss_pred CCCccccCCCCCChHHHHHHHHhchhcCCceEEe---------cCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHH
Q 014237 315 FGDKKTYQMNPANYREALVEAQADESEGADILLV---------KPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGG 385 (428)
Q Consensus 315 fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMV---------KPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa 385 (428)
+..+.+||.+. ++.|||+|-+ |+..+-++.++++++. ++|+.|
T Consensus 135 ---------~v~t~eea~~a----~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~-~ipvIA-------------- 186 (229)
T 3q58_A 135 ---------DCSTVNEGISC----HQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA-GCRVIA-------------- 186 (229)
T ss_dssp ---------ECSSHHHHHHH----HHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT-TCCEEE--------------
T ss_pred ---------ecCCHHHHHHH----HhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc-CCCEEE--------------
Confidence 23366776544 4679999964 3456778999999998 999986
Q ss_pred HCCCCchhhHHHHHHHHHHHhcccEeehh--c--HHHHHHHHh
Q 014237 386 ALKMIDEQRVMMESLMCLRRAGADIILTY--F--ALQAARCLC 424 (428)
Q Consensus 386 ~~G~iD~~~~vlEsL~~~kRAGAd~IiTY--f--A~e~a~wL~ 424 (428)
.|-|.. .|-+..++.+|||.++-- + ..++.+|+.
T Consensus 187 -~GGI~t----~~d~~~~~~~GadgV~VGsai~~p~~~~~~f~ 224 (229)
T 3q58_A 187 -EGRYNT----PALAANAIEHGAWAVTVGSAITRIEHICQWFS 224 (229)
T ss_dssp -ESSCCS----HHHHHHHHHTTCSEEEECHHHHCHHHHHHHHH
T ss_pred -ECCCCC----HHHHHHHHHcCCCEEEEchHhcChHHHHHHHH
Confidence 344432 233445667899987632 2 234555554
No 28
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=92.43 E-value=0.55 Score=48.37 Aligned_cols=122 Identities=19% Similarity=0.276 Sum_probs=79.5
Q ss_pred HHHHHHHHcCCCeecCCCCC--------------------CchHHHHHHHHHHCCCCCceeechhhhhccccc-------
Q 014237 250 KQAVSQARAGADVVSPSDMM--------------------DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFY------- 302 (428)
Q Consensus 250 k~Als~A~AGADiVAPSDMM--------------------DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafY------- 302 (428)
+..-.+.+|||--|--.|-. =.||.|+|.+.|..|- ++-|++-.=-++..+-
T Consensus 167 ~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~-d~vIiARTDa~~a~li~s~~d~~ 245 (429)
T 1f8m_A 167 ELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADV-PTVVIARTDAEAATLITSDVDER 245 (429)
T ss_dssp HHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTC-CCEEEEEECTTTCCEESCCCSTT
T ss_pred HHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCC-CEEEEEEechhhhcccccccccc
Confidence 33445677888655444432 2589999999998884 7888876544432211
Q ss_pred -cchhhhhcCCCCCCCccc-cCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCC--CC--eEEEEech
Q 014237 303 -GPFREALDSNPRFGDKKT-YQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYP--LP--IAAYQVSG 376 (428)
Q Consensus 303 -GPFRdAa~Sap~fgDRkt-YQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~--lP--vaaYqVSG 376 (428)
+||-.... ++.. |+.. ...+|||+.+..=.+ |||+|++-++++=+|-|+++.+.++ .| +.+|+-|.
T Consensus 246 d~~fl~g~~------~~eg~y~~~-~gld~AI~Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~~~P~~~La~n~sP 317 (429)
T 1f8m_A 246 DQPFITGER------TREGFYRTK-NGIEPCIARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSP 317 (429)
T ss_dssp TGGGEEEEE------CTTSCEEEC-CSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECCT
T ss_pred ccccccCCC------Ccccccccc-cCHHHHHHHHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcccCCCceeecCCCC
Confidence 11211110 1111 2222 357899988876655 9999999988899999998887764 36 78899887
Q ss_pred HHHH
Q 014237 377 EYSM 380 (428)
Q Consensus 377 EYaM 380 (428)
-|.-
T Consensus 318 sf~w 321 (429)
T 1f8m_A 318 SFNW 321 (429)
T ss_dssp TSCH
T ss_pred CCCc
Confidence 7663
No 29
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=92.37 E-value=0.65 Score=48.02 Aligned_cols=121 Identities=20% Similarity=0.263 Sum_probs=80.0
Q ss_pred HHHHHHHHcCCCeecCCCCC---------C-----------chHHHHHHHHHHCCCCCceeechhhhhccccccchhhhh
Q 014237 250 KQAVSQARAGADVVSPSDMM---------D-----------GRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREAL 309 (428)
Q Consensus 250 k~Als~A~AGADiVAPSDMM---------D-----------GRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa 309 (428)
+..-.+.+|||--|--.|-. + .||.|+|.+.|..|- ++-|++-+=-++..|-.
T Consensus 171 ~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~-d~~IiARTDa~~a~l~~------ 243 (439)
T 3i4e_A 171 ELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGT-PTVLVARTDAEAADLIT------ 243 (439)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTC-CCEEEEEECTTTCCEES------
T ss_pred HHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCC-CeEEEEEcCcccccccc------
Confidence 44445677888666555543 2 489999999998885 67888765444432211
Q ss_pred cCCCCCCC---------ccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhh----CCCCeEEEEech
Q 014237 310 DSNPRFGD---------KKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDK----YPLPIAAYQVSG 376 (428)
Q Consensus 310 ~Sap~fgD---------RktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~----~~lPvaaYqVSG 376 (428)
|..-..| +..|-.-....+|||+.+..=.+ |||+|++.|+++=++-|+++.+. +++++.+|+-|.
T Consensus 244 -s~~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~~~P~~~l~~~~sP 321 (439)
T 3i4e_A 244 -SDIDDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHKQFPGKLLSYNCSP 321 (439)
T ss_dssp -CCCCTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCS
T ss_pred -cccccccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcccCCceEEeeCCCC
Confidence 1100011 11221112358999999887665 99999999999999998877654 567889999998
Q ss_pred HHH
Q 014237 377 EYS 379 (428)
Q Consensus 377 EYa 379 (428)
.|.
T Consensus 322 sfn 324 (439)
T 3i4e_A 322 SFN 324 (439)
T ss_dssp SSC
T ss_pred CCc
Confidence 664
No 30
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=92.08 E-value=0.52 Score=42.68 Aligned_cols=51 Identities=20% Similarity=0.163 Sum_probs=35.4
Q ss_pred CCccccCCCCCChHHHHHHHHhchhcCCceEEe-------cCCCchHHHHHHHHhhCCCCeEE
Q 014237 316 GDKKTYQMNPANYREALVEAQADESEGADILLV-------KPGLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 316 gDRktYQmdpaN~~EAlrE~~lDi~EGADilMV-------KPal~YLDII~~vk~~~~lPvaa 371 (428)
||+..|+.-- +..|..++.+ +.|||.|-| .+...+ ++|+++++.+++|+.+
T Consensus 23 g~~~~~~~~~-d~~~~a~~~~---~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v 80 (244)
T 1vzw_A 23 GESGTETSYG-SPLEAALAWQ---RSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMDIKVEL 80 (244)
T ss_dssp -----CCBCC-CHHHHHHHHH---HTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCSSEEEE
T ss_pred cccccceecC-CHHHHHHHHH---HcCCCEEEEecCchhhcCCChH-HHHHHHHHhcCCcEEE
Confidence 6777787543 6666555543 589999976 477788 9999999999999876
No 31
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.94 E-value=5.6 Score=38.03 Aligned_cols=103 Identities=19% Similarity=0.232 Sum_probs=67.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHH------------------HHHHHHHHCCC--eEEEe
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPR------------------TIWLLKDRYPD--LVIYT 217 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~r------------------AIr~iK~~~Pd--l~Vit 217 (428)
...+.++.+.+.|+..+-| |+ | .-|+.. ||++.+ .++.+|+.+++ +++++
T Consensus 33 ~~~~~~~~l~~~GaD~iEl-gi-P--fSDP~a------DGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~ 102 (267)
T 3vnd_A 33 LSLKIIQTLVDNGADALEL-GF-P--FSDPLA------DGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLL 102 (267)
T ss_dssp HHHHHHHHHHHTTCSSEEE-EC-C--CSCCTT------CCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEE-CC-C--CCCCCC------CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 4788999999999988777 84 6 345543 455443 45566666444 44442
Q ss_pred eecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceee
Q 014237 218 DVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIM 291 (428)
Q Consensus 218 DVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IM 291 (428)
-.. |. + .-| +.+-+-..++||+|.|-=.|+=......+++++.++|...+.++
T Consensus 103 Y~n--pv--------~-~~g----------~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~li 155 (267)
T 3vnd_A 103 YAN--LV--------F-ANG----------IDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIA 155 (267)
T ss_dssp CHH--HH--------H-HHC----------HHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEE
T ss_pred cCc--HH--------H-Hhh----------HHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEE
Confidence 111 10 0 001 13334456789999966668877888999999999999777777
No 32
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=91.82 E-value=0.48 Score=44.10 Aligned_cols=161 Identities=16% Similarity=0.141 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
...+.++...+.|...+.. + + ...|+.||+.. ++=|+.... ..|. ||..++
T Consensus 37 ~~~~~A~a~~~~Ga~~i~~-~-----------~---------~~~i~~ir~~v-~~Pvig~~k-~d~~--~~~~~I---- 87 (232)
T 3igs_A 37 IVAAMALAAEQAGAVAVRI-E-----------G---------IDNLRMTRSLV-SVPIIGIIK-RDLD--ESPVRI---- 87 (232)
T ss_dssp HHHHHHHHHHHTTCSEEEE-E-----------S---------HHHHHHHHTTC-CSCEEEECB-CCCS--SCCCCB----
T ss_pred hHHHHHHHHHHCCCeEEEE-C-----------C---------HHHHHHHHHhc-CCCEEEEEe-ecCC--CcceEe----
Confidence 4777888888999988664 1 1 45789999876 555555422 2232 222233
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCC---CchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMM---DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPR 314 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPSDMM---DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~ 314 (428)
++|++. +....++|||+|...-.. +..+..+-+.+.+.| +.+|.
T Consensus 88 ----~~~~~~----i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g---~~v~~---------------------- 134 (232)
T 3igs_A 88 ----TPFLDD----VDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHH---LLTMA---------------------- 134 (232)
T ss_dssp ----SCSHHH----HHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT---CEEEE----------------------
T ss_pred ----CccHHH----HHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCC---CEEEE----------------------
Confidence 224333 334568999999743221 234444444444444 44442
Q ss_pred CCCccccCCCCCChHHHHHHHHhchhcCCceEEe---------cCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHH
Q 014237 315 FGDKKTYQMNPANYREALVEAQADESEGADILLV---------KPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGG 385 (428)
Q Consensus 315 fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMV---------KPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa 385 (428)
+..+.+||.+. ++.|||+|-+ |+..+-++.++++++. ++|+.|
T Consensus 135 ---------~v~t~eea~~a----~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~-~ipvIA-------------- 186 (232)
T 3igs_A 135 ---------DCSSVDDGLAC----QRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA-GCRVIA-------------- 186 (232)
T ss_dssp ---------ECCSHHHHHHH----HHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT-TCCEEE--------------
T ss_pred ---------eCCCHHHHHHH----HhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc-CCcEEE--------------
Confidence 22355666443 4679999964 3445778999999998 999986
Q ss_pred HCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 386 ALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 386 ~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
.|-|.. .|-+..++.+|||.++-
T Consensus 187 -~GGI~t----~~d~~~~~~~GadgV~V 209 (232)
T 3igs_A 187 -EGRYNS----PALAAEAIRYGAWAVTV 209 (232)
T ss_dssp -ESCCCS----HHHHHHHHHTTCSEEEE
T ss_pred -ECCCCC----HHHHHHHHHcCCCEEEE
Confidence 333432 23344566789998763
No 33
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=91.68 E-value=1.8 Score=42.13 Aligned_cols=165 Identities=17% Similarity=0.131 Sum_probs=97.9
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEeec-CCCCCCCcccCcCcCCCCCH-----HHHHHHHHHHCCCeEEEeeec
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPK-VPDALKSPTGDEAYNDNGLV-----PRTIWLLKDRYPDLVIYTDVA 220 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgv-i~~~~KD~~Gs~A~~~~g~v-----~rAIr~iK~~~Pdl~VitDVc 220 (428)
|||+|=... ..-+.+.|++.+.+=|- +. .+..+.+-+++ ...++.|.+..+ +-||+|.=
T Consensus 23 ~~~a~D~~s-------A~~~~~aG~~ai~vsg~~~a-------~~lG~pD~~~vt~~em~~~~~~I~~~~~-~PviaD~d 87 (295)
T 1s2w_A 23 IMEAHNGLS-------ARIVQEAGFKGIWGSGLSVS-------AQLGVRDSNEASWTQVVEVLEFMSDASD-VPILLDAD 87 (295)
T ss_dssp EEEECSHHH-------HHHHHHHTCSCEEECCHHHH-------HTC---------CHHHHHHHHHHHHTCS-SCEEEECC
T ss_pred EecCCCHHH-------HHHHHHcCCCEEEeChHHHH-------HhCCCCCCCCCCHHHHHHHHHHHHhcCC-CCEEecCC
Confidence 677754432 12233469999887331 11 01123222333 355666666553 44888862
Q ss_pred ccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC--------Cc----------hHHHHHHHHHH
Q 014237 221 LDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM--------DG----------RVGAIRAALDA 282 (428)
Q Consensus 221 Lc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMM--------DG----------RV~aIR~aLD~ 282 (428)
. |+ -|. ....+.+-.+.++||+.|--.|=. .| .+..||.+.+.
T Consensus 88 ~---------------Gy-g~~---~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a 148 (295)
T 1s2w_A 88 T---------------GY-GNF---NNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDS 148 (295)
T ss_dssp S---------------SC-SSH---HHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHH
T ss_pred C---------------CC-CCH---HHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHh
Confidence 2 31 122 234455566678999998777654 22 26666666665
Q ss_pred CCCCCceeechhhhh-ccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHH
Q 014237 283 EGFQHVSIMSYTAKY-ASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLL 361 (428)
Q Consensus 283 ~Gf~~v~IMSYsaKy-ASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~v 361 (428)
....+.-|++-+--+ +. ...+|+|+.+..=.+-|||+|++.++.+-.+.++++
T Consensus 149 ~~~~~~~i~aRtda~~a~--------------------------~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i 202 (295)
T 1s2w_A 149 QTDPDFCIVARVEAFIAG--------------------------WGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAF 202 (295)
T ss_dssp CSSTTCEEEEEECTTTTT--------------------------CCHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHH
T ss_pred cccCCcEEEEeehHHhcc--------------------------ccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHH
Confidence 533344444433222 10 137899999998899999999999888889999999
Q ss_pred HhhCC--CCeEE
Q 014237 362 RDKYP--LPIAA 371 (428)
Q Consensus 362 k~~~~--lPvaa 371 (428)
.+.++ +|+.+
T Consensus 203 ~~~~~~~~P~i~ 214 (295)
T 1s2w_A 203 MKAWNNQGPVVI 214 (295)
T ss_dssp HHHHTTCSCEEE
T ss_pred HHHcCCCCCEEE
Confidence 99987 99964
No 34
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=91.64 E-value=6.7 Score=35.71 Aligned_cols=172 Identities=25% Similarity=0.259 Sum_probs=90.8
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCC
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSS 226 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTs 226 (428)
--|.+..+. +.++.++.+.+.|+..+.+-.. ..+ |. ..|.....++.|++.+ ++-|+.
T Consensus 22 ~~g~~~~~~--~~~~~a~~~~~~Ga~~i~v~d~----~~~--~~----~~g~~~~~i~~i~~~~-~iPvi~--------- 79 (266)
T 2w6r_A 22 HSGKKNTGI--LLRDWVVEVEKRGAGEILLTSI----DRD--GT----KSGYDTEMIRFVRPLT-TLPIIA--------- 79 (266)
T ss_dssp TTTTEEEEE--EHHHHHHHHHHHTCSEEEEEET----TTS--SC----SSCCCHHHHHHHGGGC-CSCEEE---------
T ss_pred cCCeeccCC--CHHHHHHHHHHCCCCEEEEEec----Ccc--cC----CCcccHHHHHHHHHhc-CCCEEE---------
Confidence 334455554 3788999999999999998442 122 21 1234567888888765 333333
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCee-cCCCCCCc--hHHHHHHHHHHCC--CCCceeechhhhhcccc
Q 014237 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVV-SPSDMMDG--RVGAIRAALDAEG--FQHVSIMSYTAKYASSF 301 (428)
Q Consensus 227 hGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiV-APSDMMDG--RV~aIR~aLD~~G--f~~v~IMSYsaKyASaf 301 (428)
.|.|.+-+.++ .+ .++|||-| .++..+++ ....+++.++..| ... .+++-.+|-..
T Consensus 80 ---------~ggi~~~~~i~----~~---~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~d~~~~~-- 140 (266)
T 2w6r_A 80 ---------SGGAGKMEHFL----EA---FLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQA-VVVAIDAKRVD-- 140 (266)
T ss_dssp ---------ESCCCSTHHHH----HH---HHHTCSEEECCCCC------CHHHHHHCC----CCCE-EEEEEEEEEET--
T ss_pred ---------ECCCCCHHHHH----HH---HHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCE-EEEEEEEEecC--
Confidence 12222222222 22 24799964 45666656 6778888887776 333 23444443110
Q ss_pred ccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEe---cCCC----chHHHHHHHHhhCCCCeEE
Q 014237 302 YGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLV---KPGL----PYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 302 YGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMV---KPal----~YLDII~~vk~~~~lPvaa 371 (428)
|-++=.... +++.+ ..+..|.+++++ +-|++.|.+ +... +-++.++++++..++|+.+
T Consensus 141 -g~~~v~~~g----~~~~~----~~~~~e~~~~~~---~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia 205 (266)
T 2w6r_A 141 -GEFMVFTHS----GKKNT----GILLRDWVVEVE---KRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA 205 (266)
T ss_dssp -TEEEEEETT----TTEEE----EEEHHHHHHHHH---HTTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEE
T ss_pred -CCEEEEECC----Cceec----chhHHHHHHHHH---HcCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEE
Confidence 000000000 11110 113455555554 479999886 3222 3489999999999999976
No 35
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=91.58 E-value=2.5 Score=41.17 Aligned_cols=165 Identities=17% Similarity=0.172 Sum_probs=108.0
Q ss_pred CC-CceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCC
Q 014237 147 MP-GCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYS 225 (428)
Q Consensus 147 MP-Gv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YT 225 (428)
|| |-|..+.. ..++.+.++.+.|..+|-|=|- .-+...|+++.++- +=|+..+-|-|=+
T Consensus 85 ~pfgsy~~s~~-~a~~na~rl~kaGa~aVklEdg-----------------~e~~~~I~al~~ag--IpV~gHiGLtPQs 144 (275)
T 1o66_A 85 LPFGAYQQSKE-QAFAAAAELMAAGAHMVKLEGG-----------------VWMAETTEFLQMRG--IPVCAHIGLTPQS 144 (275)
T ss_dssp CCTTSSSSCHH-HHHHHHHHHHHTTCSEEEEECS-----------------GGGHHHHHHHHHTT--CCEEEEEESCGGG
T ss_pred CCCCCccCCHH-HHHHHHHHHHHcCCcEEEECCc-----------------HHHHHHHHHHHHcC--CCeEeeeccCcee
Confidence 66 46667775 5888899999999999988331 13567888888764 3366666676655
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhh-hhccccccc
Q 014237 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTA-KYASSFYGP 304 (428)
Q Consensus 226 shGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsa-KyASafYGP 304 (428)
.|--.|..-. |+- +..+.+.+.|..+.+||||+|=+-.+-.--..+|.++| +++++..-| .+++.=+=-
T Consensus 145 ~~~~ggf~v~-grt---~~a~~~i~rA~a~~eAGA~~ivlE~vp~~~a~~it~~l------~iP~igIGaG~~~dgQvLV 214 (275)
T 1o66_A 145 VFAFGGYKVQ-GRG---GKAQALLNDAKAHDDAGAAVVLMECVLAELAKKVTETV------SCPTIGIGAGADCDGQVLV 214 (275)
T ss_dssp TTC---------------CHHHHHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHC------SSCEEEESSCSCSSEEEEC
T ss_pred ecccCCeEEE-eCh---HHHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHhC------CCCEEEECCCCCCCcceee
Confidence 5544443221 321 34688999999999999999987766544455666665 377777644 466655555
Q ss_pred hhhhhcC----CCCCCCccccCCCCCChHHHHHHHHhchhcCC
Q 014237 305 FREALDS----NPRFGDKKTYQMNPANYREALVEAQADESEGA 343 (428)
Q Consensus 305 FRdAa~S----ap~fgDRktYQmdpaN~~EAlrE~~lDi~EGA 343 (428)
+-|.++- .|+| -|.|----....+|+++-..|+++|.
T Consensus 215 ~~D~lG~~~~~~pkf--~k~y~~~~~~~~~a~~~y~~~V~~~~ 255 (275)
T 1o66_A 215 MHDMLGIFPGKTAKF--VKNFMQGHDSVQAAVRAYVAEVKAKT 255 (275)
T ss_dssp HHHHTTCSSSSCCTT--CCCSSTTCSSHHHHHHHHHHHHHHTC
T ss_pred HHhhcCCCCCCCCCc--hhhhhhHHHHHHHHHHHHHHHHhcCC
Confidence 6677764 4666 35564333458899999988988875
No 36
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=91.03 E-value=0.8 Score=40.66 Aligned_cols=137 Identities=21% Similarity=0.143 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceee--c-hhhhhccccccchhhhhcCC------CC
Q 014237 244 TVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIM--S-YTAKYASSFYGPFREALDSN------PR 314 (428)
Q Consensus 244 Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IM--S-YsaKyASafYGPFRdAa~Sa------p~ 314 (428)
+.+.+.+++-.+.++|+++|-=-+|-...+..||+.-+..+. ++.|= . +... -.+.|+... +.
T Consensus 17 d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~-~l~vg~g~~~~~~-------~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 17 TPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGD-KALIGAGTVLKPE-------QVDALARMGCQLIVTPN 88 (212)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTT-TSEEEEECCCSHH-------HHHHHHHTTCCEEECSS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCC-CeEEEeccccCHH-------HHHHHHHcCCCEEEeCC
Confidence 345667777777889999997755544556777776655431 33330 0 0000 011111110 00
Q ss_pred C-----CCccccCCC----CCChHHHHHHHHhchhcCCceEEecCCC-chHHHHHHHHhhCC--CCeEEEEechHHHHHH
Q 014237 315 F-----GDKKTYQMN----PANYREALVEAQADESEGADILLVKPGL-PYLDVIRLLRDKYP--LPIAAYQVSGEYSMIK 382 (428)
Q Consensus 315 f-----gDRktYQmd----paN~~EAlrE~~lDi~EGADilMVKPal-~YLDII~~vk~~~~--lPvaaYqVSGEYaMIk 382 (428)
. .-++.|.++ ..+..|+++. .+.|+|+|.+.|.. .=++.++++++.++ +|+.+
T Consensus 89 ~~~~~~~~~~~~g~~~~~g~~t~~e~~~a----~~~G~d~v~v~~t~~~g~~~~~~l~~~~~~~ipvia----------- 153 (212)
T 2v82_A 89 IHSEVIRRAVGYGMTVCPGCATATEAFTA----LEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFA----------- 153 (212)
T ss_dssp CCHHHHHHHHHTTCEEECEECSHHHHHHH----HHTTCSEEEETTHHHHCHHHHHHHHTTSCTTCEEEE-----------
T ss_pred CCHHHHHHHHHcCCCEEeecCCHHHHHHH----HHCCCCEEEEecCCCCCHHHHHHHHHhccCCCeEEE-----------
Confidence 0 001112222 4566776433 45799999997732 12688889988886 88765
Q ss_pred HHHHCCCCchhhHHHHHHHHHHHhcccEee
Q 014237 383 AGGALKMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 383 aAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
.|-|+. |.+..++.+|||.|+
T Consensus 154 ----~GGI~~-----~~i~~~~~~Ga~gv~ 174 (212)
T 2v82_A 154 ----VGGVTP-----ENLAQWIDAGCAGAG 174 (212)
T ss_dssp ----ESSCCT-----TTHHHHHHHTCSEEE
T ss_pred ----eCCCCH-----HHHHHHHHcCCCEEE
Confidence 355553 344566778999876
No 37
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=90.95 E-value=4.7 Score=36.33 Aligned_cols=177 Identities=13% Similarity=0.179 Sum_probs=97.3
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCc
Q 014237 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (428)
Q Consensus 159 l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~ 238 (428)
..+.++.+.+.|+..+-+-.. | |. +.++... ..|+.|++.+ ++-++. |.||.
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~------d--~~--~~~~~~~-~~i~~i~~~~-~ipv~v-----------~ggI~----- 85 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDL------D--AA--FGTGDNR-ALIAEVAQAM-DIKVEL-----------SGGIR----- 85 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEH------H--HH--HTSCCCH-HHHHHHHHHC-SSEEEE-----------ESSCC-----
T ss_pred HHHHHHHHHHcCCCEEEEecC------c--hh--hcCCChH-HHHHHHHHhc-CCcEEE-----------ECCcC-----
Confidence 788889999999999887542 1 11 2234455 7888998876 444444 33333
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCc
Q 014237 239 IMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDK 318 (428)
Q Consensus 239 IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDR 318 (428)
+-+. +....++|||.|.=.--.-.....+.+.+...| .++ +.+-.++- | -+. .
T Consensus 86 --~~~~-------~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g-~~~-~~~l~~~~-----g----~v~-------~ 138 (244)
T 1vzw_A 86 --DDDT-------LAAALATGCTRVNLGTAALETPEWVAKVIAEHG-DKI-AVGLDVRG-----T----TLR-------G 138 (244)
T ss_dssp --SHHH-------HHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHG-GGE-EEEEEEET-----T----EEC-------C
T ss_pred --CHHH-------HHHHHHcCCCEEEECchHhhCHHHHHHHHHHcC-CcE-EEEEEccC-----C----EEE-------E
Confidence 2222 233345899987632211111223555555555 333 33444431 1 000 1
Q ss_pred cccCCCCCChHHHHHHHHhchhcCCceEEe---cCCC----chHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 319 KTYQMNPANYREALVEAQADESEGADILLV---KPGL----PYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 319 ktYQmdpaN~~EAlrE~~lDi~EGADilMV---KPal----~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
..++-.-.+..|.+++++ +.|+|.|.+ +|.. +-++.++++++..++||.| .|-|.
T Consensus 139 ~g~~~~~~~~~e~~~~~~---~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~~~ipvia---------------~GGI~ 200 (244)
T 1vzw_A 139 RGWTRDGGDLYETLDRLN---KEGCARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVA---------------SGGVS 200 (244)
T ss_dssp SSSCCCCCBHHHHHHHHH---HTTCCCEEEEEC-------CCCHHHHHHHHHTCSSCEEE---------------ESCCC
T ss_pred cCcccCCCCHHHHHHHHH---hCCCCEEEEeccCcccccCCCCHHHHHHHHHhcCCCEEE---------------ECCCC
Confidence 112211124556555554 479997775 4443 3488999999999999876 34454
Q ss_pred hhhHHHHHHHHHHHh---cccEee
Q 014237 392 EQRVMMESLMCLRRA---GADIIL 412 (428)
Q Consensus 392 ~~~~vlEsL~~~kRA---GAd~Ii 412 (428)
. .|.+..++++ |||.++
T Consensus 201 ~----~~d~~~~~~~~~~Gadgv~ 220 (244)
T 1vzw_A 201 S----LDDLRAIAGLVPAGVEGAI 220 (244)
T ss_dssp S----HHHHHHHHTTGGGTEEEEE
T ss_pred C----HHHHHHHHhhccCCCceee
Confidence 3 2344556777 999654
No 38
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=90.81 E-value=3 Score=41.23 Aligned_cols=166 Identities=20% Similarity=0.166 Sum_probs=104.5
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEeec-CCCCCCCcccCcCcCCCCC-----HHHHHHHHHHHCCCeEEEeeec
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPK-VPDALKSPTGDEAYNDNGL-----VPRTIWLLKDRYPDLVIYTDVA 220 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgv-i~~~~KD~~Gs~A~~~~g~-----v~rAIr~iK~~~Pdl~VitDVc 220 (428)
|||+|=... .+-+.+.|++.+.+=|- +.. .+..+.+-++ +...++.|.+..|++-||+|.=
T Consensus 43 ~~~ayD~~s-------A~i~e~aGfdai~vs~~~~a~------~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d 109 (318)
T 1zlp_A 43 MPGVQDALS-------AAVVEKTGFHAAFVSGYSVSA------AMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGD 109 (318)
T ss_dssp EEEECSHHH-------HHHHHHTTCSEEEECHHHHHH------HHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECT
T ss_pred EecCCCHHH-------HHHHHHcCCCEEEECcHHHhh------HhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCC
Confidence 667754332 23344579999888441 110 0112222233 3467788888899999999963
Q ss_pred ccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC-------------------CchHHHHHHHHH
Q 014237 221 LDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM-------------------DGRVGAIRAALD 281 (428)
Q Consensus 221 Lc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMM-------------------DGRV~aIR~aLD 281 (428)
. |+= |-+ ...+.+-.+.++||+.|--.|=. =.||.++|++.+
T Consensus 110 ~---------------Gyg-~~~---~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~ 170 (318)
T 1zlp_A 110 T---------------GGG-GPL---NVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIG 170 (318)
T ss_dssp T---------------CSS-SHH---HHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHT
T ss_pred C---------------CCC-CHH---HHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcc
Confidence 2 321 222 23344455667999888765542 236666666665
Q ss_pred HCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHH
Q 014237 282 AEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLL 361 (428)
Q Consensus 282 ~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~v 361 (428)
. .+.-|++-.--++. ..-+|+|+.+..=.+-|||+|++- +++-+|.++++
T Consensus 171 ~---~~~~I~ARtda~a~--------------------------~gl~~ai~Ra~Ay~eAGAd~i~~e-~~~~~e~~~~i 220 (318)
T 1zlp_A 171 D---SDFFLVARTDARAP--------------------------HGLEEGIRRANLYKEAGADATFVE-APANVDELKEV 220 (318)
T ss_dssp T---SCCEEEEEECTHHH--------------------------HHHHHHHHHHHHHHHTTCSEEEEC-CCCSHHHHHHH
T ss_pred c---CCcEEEEeeHHhhh--------------------------cCHHHHHHHHHHHHHcCCCEEEEc-CCCCHHHHHHH
Confidence 3 23345544332320 125788888888888999999985 78889999999
Q ss_pred HhhCCCCeEEEEe
Q 014237 362 RDKYPLPIAAYQV 374 (428)
Q Consensus 362 k~~~~lPvaaYqV 374 (428)
.+.+++|+.+.-+
T Consensus 221 ~~~l~~P~lan~~ 233 (318)
T 1zlp_A 221 SAKTKGLRIANMI 233 (318)
T ss_dssp HHHSCSEEEEEEC
T ss_pred HHhcCCCEEEEec
Confidence 9999999988444
No 39
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=90.74 E-value=1.4 Score=44.66 Aligned_cols=224 Identities=17% Similarity=0.144 Sum_probs=135.7
Q ss_pred HHHHHHH-HHHcCCCeEEE--eecCCCCCCCcccCc---CcCCCCCHHHHHHHHHHHCC--CeEEEeeecccCCCCCCcc
Q 014237 159 LVQEVAK-ARDVGVNSVVL--FPKVPDALKSPTGDE---AYNDNGLVPRTIWLLKDRYP--DLVIYTDVALDPYSSDGHD 230 (428)
Q Consensus 159 l~~~v~~-~~~~GI~sv~L--Fgvi~~~~KD~~Gs~---A~~~~g~v~rAIr~iK~~~P--dl~VitDVcLc~YTshGHc 230 (428)
+++.+.+ -++.|-.-|.- |+.-.... ...|-+ ...-.-+..+|+++.|+..- +.+|..++ .||...
T Consensus 55 ~V~~iH~~Yl~AGAdII~TNTf~A~~~~l-~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsI--GP~g~~--- 128 (406)
T 1lt8_A 55 AVRQLHREFLRAGSNVMQTFTFYASEDKL-ENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGV--SQTPSY--- 128 (406)
T ss_dssp HHHHHHHHHHHTTCSEEECSCTTCSSCC--------------CHHHHHHHHHHHHHHHTTTTCEEEEEE--CCCHHH---
T ss_pred HHHHHHHHHHHhCccceeccccccCHHHH-HhcCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEc--CCcccc---
Confidence 5555544 68999884333 55422211 222310 12223578899999987642 36777776 687431
Q ss_pred eeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHHHCCCCCceee-chhhhhccccccchhhh
Q 014237 231 GIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALDAEGFQHVSIM-SYTAKYASSFYGPFREA 308 (428)
Q Consensus 231 Gil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD~~Gf~~v~IM-SYsaKyASafYGPFRdA 308 (428)
+ +.+.-|+-.+...+|+-.++++|+|+++=--|.| -.+.++.+++.+.| ++|| |.+. . .+
T Consensus 129 --l---~~~s~eel~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~---lPv~iS~T~-------~--~~- 190 (406)
T 1lt8_A 129 --L---SAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASG---KPVAATMAI-------G--PE- 190 (406)
T ss_dssp --H---TTCHHHHHHHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGGGT---SCEEEEECC-------B--TT-
T ss_pred --c---CCCCHHHHHHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHHhC---CcEEEEEEE-------C--CC-
Confidence 1 3466788888899999999999999999999998 45556666776654 4543 2221 0 00
Q ss_pred hcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCC-c--hHHHHHHHHhhC-----CCCeEEEEechHHHH
Q 014237 309 LDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGL-P--YLDVIRLLRDKY-----PLPIAAYQVSGEYSM 380 (428)
Q Consensus 309 a~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal-~--YLDII~~vk~~~-----~lPvaaYqVSGEYaM 380 (428)
| + ++=.+..+++..+.. -|+|.|++==++ | -+.+|+.+++.. +.|+.+|=-+|+..-
T Consensus 191 -------G-~----l~G~~~~~~~~~l~~---~~~~avGvNC~~gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNag~~~~ 255 (406)
T 1lt8_A 191 -------G-D----LHGVPPGEAAVRLVK---AGASIIGVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPD 255 (406)
T ss_dssp -------B-C----TTCCCHHHHHHHHHT---TTCSEEEEESSSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCTT
T ss_pred -------C-C----cCCCcHHHHHHHhhc---CCCCEEEecCCCCHHHHHHHHHHHHHhhhhcCCCccEEEecCCCCCCc
Confidence 1 1 444456666655532 479999997753 4 466777777543 799999998876321
Q ss_pred HHHHHHCCCCchh------------h-HHHHHHHHHHHhcccEee-----h-hcHHHHHHHHh
Q 014237 381 IKAGGALKMIDEQ------------R-VMMESLMCLRRAGADIIL-----T-YFALQAARCLC 424 (428)
Q Consensus 381 IkaAa~~G~iD~~------------~-~vlEsL~~~kRAGAd~Ii-----T-YfA~e~a~wL~ 424 (428)
. ..++|.+.. + -+.+....+..+|+.+|= | .+-..++++|+
T Consensus 256 ~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~w~~~Ga~iIGGCCGTtPeHI~aia~~l~ 315 (406)
T 1lt8_A 256 A---NKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEELA 315 (406)
T ss_dssp C---CTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTEEEECCCTTCCHHHHHHHHHHTH
T ss_pred C---CcccccCCccccccCCHHHHHHHHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHh
Confidence 1 146666411 1 256666777888999873 1 34445666664
No 40
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=90.73 E-value=5.1 Score=37.68 Aligned_cols=154 Identities=13% Similarity=0.172 Sum_probs=99.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
..++.++.+++-|++.+=+ .- .++ + -..+|+.||++||+++|-+ |
T Consensus 26 ~a~~~a~al~~gGi~~iEv-t~-----~t~--------~--a~~~I~~l~~~~p~~~IGA-------------------G 70 (217)
T 3lab_A 26 HAIPMAKALVAGGVHLLEV-TL-----RTE--------A--GLAAISAIKKAVPEAIVGA-------------------G 70 (217)
T ss_dssp GHHHHHHHHHHTTCCEEEE-ET-----TST--------T--HHHHHHHHHHHCTTSEEEE-------------------E
T ss_pred HHHHHHHHHHHcCCCEEEE-eC-----CCc--------c--HHHHHHHHHHHCCCCeEee-------------------c
Confidence 5889999999999998766 21 111 1 2379999999999987744 4
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCee-cCCCCCCchHHHHHHHHHHCCCCCceeechhhhhcc--ccccchhhhhcCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVV-SPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYAS--SFYGPFREALDSNPR 314 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiV-APSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyAS--afYGPFRdAa~Sap~ 314 (428)
.|.+- +++-...+|||++| +|. .|=. ++.|+-+|-- .+-||+==
T Consensus 71 TVlt~-------~~a~~ai~AGA~fivsP~--~~~e-----------------vi~~~~~~~v~~~~~~~~~P------- 117 (217)
T 3lab_A 71 TVCTA-------DDFQKAIDAGAQFIVSPG--LTPE-----------------LIEKAKQVKLDGQWQGVFLP------- 117 (217)
T ss_dssp CCCSH-------HHHHHHHHHTCSEEEESS--CCHH-----------------HHHHHHHHHHHCSCCCEEEE-------
T ss_pred cccCH-------HHHHHHHHcCCCEEEeCC--CcHH-----------------HHHHHHHcCCCccCCCeEeC-------
Confidence 55543 34555678999986 444 2222 2222222110 11222210
Q ss_pred CCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch--HHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 315 FGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY--LDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 315 fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y--LDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
.-.+..|+++. ++-|+|+|-+=|+..+ ++.|+.++.-+ ++|+.+ .|-|+
T Consensus 118 ---------G~~TptE~~~A----~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~i~~~p---------------tGGI~ 169 (217)
T 3lab_A 118 ---------GVATASEVMIA----AQAGITQLKCFPASAIGGAKLLKAWSGPFPDIQFCP---------------TGGIS 169 (217)
T ss_dssp ---------EECSHHHHHHH----HHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEEE---------------BSSCC
T ss_pred ---------CCCCHHHHHHH----HHcCCCEEEECccccccCHHHHHHHHhhhcCceEEE---------------eCCCC
Confidence 11255666665 6789999999999876 79999999988 488765 56677
Q ss_pred hhhHHHHHHHHHHHhcccEee
Q 014237 392 EQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 392 ~~~~vlEsL~~~kRAGAd~Ii 412 (428)
.+ .+..+..+|+.+.+
T Consensus 170 ~~-----N~~~~l~aGa~~~v 185 (217)
T 3lab_A 170 KD-----NYKEYLGLPNVICA 185 (217)
T ss_dssp TT-----THHHHHHSTTBCCE
T ss_pred HH-----HHHHHHHCCCEEEE
Confidence 54 45567788887665
No 41
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=90.48 E-value=0.67 Score=44.94 Aligned_cols=118 Identities=25% Similarity=0.264 Sum_probs=72.5
Q ss_pred HcCCCeec----C-CCC----CCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCC
Q 014237 257 RAGADVVS----P-SDM----MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPAN 327 (428)
Q Consensus 257 ~AGADiVA----P-SDM----MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN 327 (428)
++|||+|. . +|- |--.+..+.+...+.|. -+.|+.|+- |+ ..+|.... |.+
T Consensus 119 ~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~-p~lv~~~~~-------g~---------~v~~~~~~---~~~ 178 (304)
T 1to3_A 119 RDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGL-LSIIEPVVR-------PP---------RCGDKFDR---EQA 178 (304)
T ss_dssp HTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTC-EEEEEEEEC-------CC---------SSCSCCCH---HHH
T ss_pred HcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCC-cEEEEEECC-------CC---------ccccCCCh---hHH
Confidence 56999996 2 221 11456666666666664 355665432 21 12332222 356
Q ss_pred hHHHHHHHHhchhcCCceEEecCCC-------chHHHHHHHHhhCCCC-eEEEEechHHHHHHHHHHCCCCchhhHHHHH
Q 014237 328 YREALVEAQADESEGADILLVKPGL-------PYLDVIRLLRDKYPLP-IAAYQVSGEYSMIKAGGALKMIDEQRVMMES 399 (428)
Q Consensus 328 ~~EAlrE~~lDi~EGADilMVKPal-------~YLDII~~vk~~~~lP-vaaYqVSGEYaMIkaAa~~G~iD~~~~vlEs 399 (428)
..++.+++. +-|||+|=|+|.. ...++++.....+++| |++ .|-+++ +.++|.
T Consensus 179 v~~aa~~a~---~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~---------------aGG~~~-~~~~~~ 239 (304)
T 1to3_A 179 IIDAAKELG---DSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVIL---------------SSGVDE-KLFPRA 239 (304)
T ss_dssp HHHHHHHHT---TSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEEC---------------CTTSCT-TTHHHH
T ss_pred HHHHHHHHH---HcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEE---------------ecCCCH-HHHHHH
Confidence 666666665 4799999999951 2234444433337899 653 455564 577999
Q ss_pred HHHHHHhcccEeeh
Q 014237 400 LMCLRRAGADIILT 413 (428)
Q Consensus 400 L~~~kRAGAd~IiT 413 (428)
+...+++||+.++.
T Consensus 240 ~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 240 VRVAMEAGASGFLA 253 (304)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHcCCeEEEE
Confidence 99999999999874
No 42
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=90.16 E-value=1.8 Score=39.02 Aligned_cols=61 Identities=16% Similarity=0.211 Sum_probs=39.9
Q ss_pred HHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc-hHHHHHHH
Q 014237 201 RTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDG-RVGAIRAA 279 (428)
Q Consensus 201 rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDG-RV~aIR~a 279 (428)
..|+.||+.+|+.-|+.|+-|. + +-++ .+-..+++|||+|.=-+.-.. .+....++
T Consensus 48 ~~i~~lr~~~~~~~i~ld~~l~-----------d------~p~~------~~~~~~~aGad~i~vh~~~~~~~~~~~~~~ 104 (218)
T 3jr2_A 48 KAVSTLRHNHPNHILVCDMKTT-----------D------GGAI------LSRMAFEAGADWITVSAAAHIATIAACKKV 104 (218)
T ss_dssp HHHHHHHHHCTTSEEEEEEEEC-----------S------CHHH------HHHHHHHHTCSEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEeec-----------c------cHHH------HHHHHHhcCCCEEEEecCCCHHHHHHHHHH
Confidence 6899999999998888887431 1 1122 224457899999975555433 35566666
Q ss_pred HHHCC
Q 014237 280 LDAEG 284 (428)
Q Consensus 280 LD~~G 284 (428)
..+.|
T Consensus 105 ~~~~g 109 (218)
T 3jr2_A 105 ADELN 109 (218)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 66666
No 43
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=89.66 E-value=2.6 Score=38.13 Aligned_cols=107 Identities=16% Similarity=0.168 Sum_probs=68.8
Q ss_pred HHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHH
Q 014237 252 AVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREA 331 (428)
Q Consensus 252 Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EA 331 (428)
+-...++|||.|.=.++-......+.+.+.+.|..-+..+ +|.+..|.
T Consensus 101 ~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i--------------------------------~~~t~~e~ 148 (248)
T 1geq_A 101 LAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLA--------------------------------APNTPDER 148 (248)
T ss_dssp HHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEE--------------------------------CTTCCHHH
T ss_pred HHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEE--------------------------------CCCCHHHH
Confidence 3344678999988777776777778888888885332222 45566676
Q ss_pred HHHHHhchhcCCc-eE--EecCCC--------c-hHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHH
Q 014237 332 LVEAQADESEGAD-IL--LVKPGL--------P-YLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMES 399 (428)
Q Consensus 332 lrE~~lDi~EGAD-il--MVKPal--------~-YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEs 399 (428)
+++.. +++| +| |-.||. + -++.|+++++.+++|+.+ -|-|... |.
T Consensus 149 ~~~~~----~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~---------------~GGI~~~----e~ 205 (248)
T 1geq_A 149 LKVID----DMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAV---------------GFGVSKR----EH 205 (248)
T ss_dssp HHHHH----HHCSSEEEEECCC-------CCCHHHHHHHHHHHHHCSSCEEE---------------ESCCCSH----HH
T ss_pred HHHHH----hcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEE---------------EeecCCH----HH
Confidence 66554 3466 43 333641 2 378999999999999754 3445542 34
Q ss_pred HHHHHHhcccEeeh
Q 014237 400 LMCLRRAGADIILT 413 (428)
Q Consensus 400 L~~~kRAGAd~IiT 413 (428)
+..++.+|||.++.
T Consensus 206 i~~~~~~Gad~viv 219 (248)
T 1geq_A 206 VVSLLKEGANGVVV 219 (248)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 44566789998653
No 44
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=89.15 E-value=2.5 Score=41.12 Aligned_cols=203 Identities=17% Similarity=0.141 Sum_probs=113.1
Q ss_pred CCCCceeechhhhHHHHHHHHHHcCCCeEEEeec-CCCCCCCcccCcCcCCCCCH-----HHHHHHHHHHCCCeEEEeee
Q 014237 146 AMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPK-VPDALKSPTGDEAYNDNGLV-----PRTIWLLKDRYPDLVIYTDV 219 (428)
Q Consensus 146 SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgv-i~~~~KD~~Gs~A~~~~g~v-----~rAIr~iK~~~Pdl~VitDV 219 (428)
.|||+|=... ..-+.+.|++.+.+=|- +.. +..+.+-+++ ...++.|.+..+ +-|++|.
T Consensus 18 ~~~~a~D~~s-------A~~~~~aG~~ai~vs~~~~a~-------~~G~pD~~~vt~~em~~~~~~I~~~~~-~PviaD~ 82 (290)
T 2hjp_A 18 TAMAAHNPLV-------AKLAEQAGFGGIWGSGFELSA-------SYAVPDANILSMSTHLEMMRAIASTVS-IPLIADI 82 (290)
T ss_dssp EEEECSSHHH-------HHHHHHHTCSEEEECHHHHHH-------HTTSCTTTCSCHHHHHHHHHHHHTTCS-SCEEEEC
T ss_pred EEecCCCHHH-------HHHHHHcCCCEEEEChHHHHH-------hCCCCCCCCCCHHHHHHHHHHHHhcCC-CCEEEEC
Confidence 3677754433 22233479999888431 110 1223333333 355666766654 4477885
Q ss_pred cccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-------c-----------hHHHHHHHHH
Q 014237 220 ALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-------G-----------RVGAIRAALD 281 (428)
Q Consensus 220 cLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-------G-----------RV~aIR~aLD 281 (428)
= .|+= |- +...+.+-.+.++||+.|--.|=.- | .+..||.+.+
T Consensus 83 d---------------~Gyg-~~---~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~ 143 (290)
T 2hjp_A 83 D---------------TGFG-NA---VNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATA 143 (290)
T ss_dssp T---------------TTTS-SH---HHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHH
T ss_pred C---------------CCCC-CH---HHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHH
Confidence 3 2321 22 2344455556679999887666431 1 1445555555
Q ss_pred HCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHH
Q 014237 282 AEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLL 361 (428)
Q Consensus 282 ~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~v 361 (428)
.....+.-|++-+--+.. ....+|+|+.+..=.+-|||+|++-=..+-.|.++++
T Consensus 144 a~~~~~~~i~aRtda~~a-------------------------~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i 198 (290)
T 2hjp_A 144 ARADRDFVVIARVEALIA-------------------------GLGQQEAVRRGQAYEEAGADAILIHSRQKTPDEILAF 198 (290)
T ss_dssp HCSSTTSEEEEEECTTTT-------------------------TCCHHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHH
T ss_pred hcccCCcEEEEeehHhhc-------------------------cccHHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHH
Confidence 443223344433222200 1137899998888777899999985438889999999
Q ss_pred HhhCC--CCeEEEEechHHHHHHHHHHCC-----------CCchhhHHHHHHHHHHHhc
Q 014237 362 RDKYP--LPIAAYQVSGEYSMIKAGGALK-----------MIDEQRVMMESLMCLRRAG 407 (428)
Q Consensus 362 k~~~~--lPvaaYqVSGEYaMIkaAa~~G-----------~iD~~~~vlEsL~~~kRAG 407 (428)
.+.++ +|+.+=-+++..--.+.-++.| +----..+.+.+..+++.|
T Consensus 199 ~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~raa~~a~~~~~~~i~~~g 257 (290)
T 2hjp_A 199 VKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRAAVGAVREVFARIRRDG 257 (290)
T ss_dssp HHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHHHHHHHHHHHHHHHHHcC
Confidence 99998 9999832334222234445555 1111234556666666655
No 45
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=88.96 E-value=2.9 Score=40.54 Aligned_cols=135 Identities=18% Similarity=0.266 Sum_probs=81.2
Q ss_pred CCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------
Q 014237 195 DNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------ 268 (428)
Q Consensus 195 ~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------ 268 (428)
..|+|++ ++.++..|..++. ..+-||+ +||.||- +.++.|++ -+.++|+|-|.+.+.
T Consensus 11 ~~~~~~~-~~~m~~~~~Gv~~---a~vTPf~---------~dg~iD~-~~l~~lv~---~li~~Gv~Gi~v~GtTGE~~~ 73 (315)
T 3na8_A 11 SSGLVPR-GSHMSASIHGIIG---YTITPFA---------ADGGLDL-PALGRSIE---RLIDGGVHAIAPLGSTGEGAY 73 (315)
T ss_dssp -------------CCCCEEEE---ECCCCBC---------TTSSBCH-HHHHHHHH---HHHHTTCSEEECSSGGGTGGG
T ss_pred ccCcCCC-chhcccccCceEE---EeeCcCC---------CCCCcCH-HHHHHHHH---HHHHcCCCEEEECccccChhh
Confidence 4577774 4555555544433 2355774 4677773 34444444 456799998876653
Q ss_pred --CCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceE
Q 014237 269 --MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADIL 346 (428)
Q Consensus 269 --MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADil 346 (428)
.+=|...++.+.+..+ .+++|+.=.. + .|.+|+++.+..=.+-|||-+
T Consensus 74 Ls~~Er~~v~~~~v~~~~-grvpViaGvg---------------~--------------~~t~~ai~la~~A~~~Gadav 123 (315)
T 3na8_A 74 LSDPEWDEVVDFTLKTVA-HRVPTIVSVS---------------D--------------LTTAKTVRRAQFAESLGAEAV 123 (315)
T ss_dssp SCHHHHHHHHHHHHHHHT-TSSCBEEECC---------------C--------------SSHHHHHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHHhC-CCCcEEEecC---------------C--------------CCHHHHHHHHHHHHhcCCCEE
Confidence 4567777888877654 3677765421 1 156888888877777899999
Q ss_pred EecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 347 LVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 347 MVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
||=|-..| .+=.+.+.+.+++|+..||+-+
T Consensus 124 lv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 160 (315)
T 3na8_A 124 MVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPG 160 (315)
T ss_dssp EECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcc
Confidence 99664322 3445577788899999999766
No 46
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=88.65 E-value=3 Score=40.46 Aligned_cols=110 Identities=20% Similarity=0.285 Sum_probs=75.0
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.||-| .++.|++ -+.++|+|-|.+.+. .+=|...++.+.+..+ .+++|+.=..
T Consensus 35 ~~dg~iD~~-~l~~li~---~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaGvg---------- 99 (315)
T 3si9_A 35 DDNGAIDEK-AFCNFVE---WQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVA-KRVPVVAGAG---------- 99 (315)
T ss_dssp CTTSCBCHH-HHHHHHH---HHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECC----------
T ss_pred CCCCCcCHH-HHHHHHH---HHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhC-CCCcEEEeCC----------
Confidence 346777743 3444443 456799999877663 4567777888887654 3677775321
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEechH
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSGE 377 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSGE 377 (428)
+ .|.+|+++.+..=.+-|||-+||=|=..| .+=.+.+.+.+++|+..||+-|-
T Consensus 100 -----~--------------~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~ 159 (315)
T 3si9_A 100 -----S--------------NSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSR 159 (315)
T ss_dssp -----C--------------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHH
T ss_pred -----C--------------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchh
Confidence 1 25788888877777789999998764222 34445777888999999998663
No 47
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=88.53 E-value=5.1 Score=35.93 Aligned_cols=182 Identities=15% Similarity=0.224 Sum_probs=97.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
+..+.++.+.+.|+..+-+... + |. +.++... ..|+.|++.+ ++-++. |.||.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~-d-------~~--~~~~~~~-~~i~~i~~~~-~ipv~v-----------~ggi~---- 84 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDL-D-------AA--FGRGSNH-ELLAEVVGKL-DVQVEL-----------SGGIR---- 84 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEH-H-------HH--TTSCCCH-HHHHHHHHHC-SSEEEE-----------ESSCC----
T ss_pred CHHHHHHHHHHcCCCEEEEEcC-c-------cc--ccCCChH-HHHHHHHHhc-CCcEEE-----------ECCCC----
Confidence 3788899999999999888642 1 11 1223334 7888898876 444443 43443
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGD 317 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgD 317 (428)
+-+. +....++|||.|.=.--.-.....+++.+...| ..+ +++-.++-.. |.++ + .-
T Consensus 85 ---~~~~-------~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g-~~~-~~~ld~~~~~---~~~~--v------~~ 141 (244)
T 2y88_A 85 ---DDES-------LAAALATGCARVNVGTAALENPQWCARVIGEHG-DQV-AVGLDVQIID---GEHR--L------RG 141 (244)
T ss_dssp ---SHHH-------HHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHG-GGE-EEEEEEEEET---TEEE--E------EE
T ss_pred ---CHHH-------HHHHHHcCCCEEEECchHhhChHHHHHHHHHcC-CCE-EEEEeccccC---CCCE--E------EE
Confidence 2222 333345899998643211112223455555555 232 2333332110 0000 0 00
Q ss_pred ccccCCCCCChHHHHHHHHhchhcCCceEEe---cCCC----chHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCC
Q 014237 318 KKTYQMNPANYREALVEAQADESEGADILLV---KPGL----PYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMI 390 (428)
Q Consensus 318 RktYQmdpaN~~EAlrE~~lDi~EGADilMV---KPal----~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~i 390 (428)
| .++-+..+..|.+++++ +.|+|.|.+ ++.. +-++.++++++..++||.+ .|-|
T Consensus 142 ~-g~~~~~~~~~e~~~~~~---~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~ipvia---------------~GGI 202 (244)
T 2y88_A 142 R-GWETDGGDLWDVLERLD---SEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIA---------------SGGV 202 (244)
T ss_dssp G-GGTEEEEEHHHHHHHHH---HTTCCCEEEEETTTTTTTSCCCHHHHHHHHTTCSSCEEE---------------ESCC
T ss_pred C-CccCCCCCHHHHHHHHH---hCCCCEEEEEecCCccccCCCCHHHHHHHHHhCCCCEEE---------------ECCC
Confidence 1 11111113344444443 469999887 4432 4588999999998999876 4445
Q ss_pred chhhHHHHHHHHHHHh---cccEee
Q 014237 391 DEQRVMMESLMCLRRA---GADIIL 412 (428)
Q Consensus 391 D~~~~vlEsL~~~kRA---GAd~Ii 412 (428)
.. .|-+..++.+ |||.++
T Consensus 203 ~~----~~d~~~~~~~~~~Gad~v~ 223 (244)
T 2y88_A 203 SS----LDDLRAIATLTHRGVEGAI 223 (244)
T ss_dssp CS----HHHHHHHHTTGGGTEEEEE
T ss_pred CC----HHHHHHHHhhccCCCCEEE
Confidence 43 2344456667 999655
No 48
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=88.15 E-value=4.5 Score=38.84 Aligned_cols=108 Identities=21% Similarity=0.269 Sum_probs=72.6
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------C--CchHHHHHHHHHHCCCCCceeechhhhhccccccchh
Q 014237 235 EDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------M--DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFR 306 (428)
Q Consensus 235 ~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------M--DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFR 306 (428)
+||.|| -+.++.|++ -+.++|+|-|.+.+. | +=|...++.+.+..+ .+++|+.=.
T Consensus 30 ~dg~iD-~~~l~~lv~---~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv------------ 92 (304)
T 3cpr_A 30 ESGDID-IAAGREVAA---YLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAGV------------ 92 (304)
T ss_dssp TTSCBC-HHHHHHHHH---HHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEEC------------
T ss_pred CCCCcC-HHHHHHHHH---HHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecC------------
Confidence 457776 444444444 456789998876542 2 247788888887754 367777532
Q ss_pred hhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 307 EALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 307 dAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
++ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 93 ---g~--------------~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~ 152 (304)
T 3cpr_A 93 ---GT--------------NNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPG 152 (304)
T ss_dssp ---CC--------------SCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred ---CC--------------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 11 26788888877666779999998664221 3344567788899999999754
No 49
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=88.12 E-value=1.2 Score=43.50 Aligned_cols=156 Identities=25% Similarity=0.274 Sum_probs=99.4
Q ss_pred HHHcCCCeEEEee-cCCCCCCCcccCcCcCCCCCH-----HHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCcc
Q 014237 166 ARDVGVNSVVLFP-KVPDALKSPTGDEAYNDNGLV-----PRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVI 239 (428)
Q Consensus 166 ~~~~GI~sv~LFg-vi~~~~KD~~Gs~A~~~~g~v-----~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~I 239 (428)
+.+.|++.+.+=| -+. ..+..+.+.+++ ...++.|.+.. ++-||+|.=. |+-
T Consensus 38 ~e~aGf~ai~vs~~s~a------~~~~G~pD~~~vt~~em~~~~~~I~r~~-~~PviaD~d~---------------Gyg 95 (298)
T 3eoo_A 38 AEAVGFKAVYLSGGGVA------ANSLGIPDLGISTMDDVLVDANRITNAT-NLPLLVDIDT---------------GWG 95 (298)
T ss_dssp HHHHTCSCEEECHHHHH------HHTTCCCSSSCCCHHHHHHHHHHHHHHC-CSCEEEECTT---------------CSS
T ss_pred HHHcCCCEEEECcHHHH------HHhcCCCCCCCCCHHHHHHHHHHHHhhc-CCeEEEECCC---------------CCC
Confidence 3456999988843 111 011223333443 34566666654 4668888622 221
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCeecCCCCC--------Cc--------hHHHHHHHHHHCCCCCceeechhhhhcccccc
Q 014237 240 MNDETVHQLCKQAVSQARAGADVVSPSDMM--------DG--------RVGAIRAALDAEGFQHVSIMSYTAKYASSFYG 303 (428)
Q Consensus 240 dND~Tl~~Lak~Als~A~AGADiVAPSDMM--------DG--------RV~aIR~aLD~~Gf~~v~IMSYsaKyASafYG 303 (428)
|-+ ...+.+-.+.++||+.|--.|-. .| .|..||.+.+...=.+.-|++-.--|+.
T Consensus 96 -~~~---~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~---- 167 (298)
T 3eoo_A 96 -GAF---NIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAA---- 167 (298)
T ss_dssp -SHH---HHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHH----
T ss_pred -CHH---HHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhh----
Confidence 222 33344556678999988776643 22 2566666666653346777776554431
Q ss_pred chhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEe
Q 014237 304 PFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQV 374 (428)
Q Consensus 304 PFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqV 374 (428)
..-+|||+.+..=.+-|||+|++ |++.-+|-|+++.+.+++|+.+--+
T Consensus 168 ----------------------~gldeai~Ra~ay~~AGAD~if~-~~~~~~ee~~~~~~~~~~Pl~~n~~ 215 (298)
T 3eoo_A 168 ----------------------EGIDAAIERAIAYVEAGADMIFP-EAMKTLDDYRRFKEAVKVPILANLT 215 (298)
T ss_dssp ----------------------HHHHHHHHHHHHHHHTTCSEEEE-CCCCSHHHHHHHHHHHCSCBEEECC
T ss_pred ----------------------cCHHHHHHHHHhhHhcCCCEEEe-CCCCCHHHHHHHHHHcCCCeEEEec
Confidence 13688999999888999999999 7888899999999999999977444
No 50
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=88.00 E-value=0.7 Score=41.60 Aligned_cols=51 Identities=12% Similarity=0.175 Sum_probs=36.3
Q ss_pred CCccccCCCCCChHHHHHHHHhchhcCCceEEe-------cCCCchHHHHHHHHhhCCCCeEE
Q 014237 316 GDKKTYQMNPANYREALVEAQADESEGADILLV-------KPGLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 316 gDRktYQmdpaN~~EAlrE~~lDi~EGADilMV-------KPal~YLDII~~vk~~~~lPvaa 371 (428)
||+.+|+.- .+..|..++. .+.|||.|-| .+...+ ++|+++++.+++|+.+
T Consensus 22 g~~~~~~~~-~d~~~~a~~~---~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v 79 (244)
T 2y88_A 22 GKAGSQTEY-GSAVDAALGW---QRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVEL 79 (244)
T ss_dssp TEEEEEEEE-EEHHHHHHHH---HHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEE
T ss_pred cccccceec-CCHHHHHHHH---HHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEE
Confidence 566677642 2555544433 3569999987 466666 9999999999999866
No 51
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=87.97 E-value=3.3 Score=40.44 Aligned_cols=165 Identities=19% Similarity=0.214 Sum_probs=97.1
Q ss_pred CC-CceeechhhhHHHHHHHHHH-cCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCC
Q 014237 147 MP-GCYRLGWRHGLVQEVAKARD-VGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPY 224 (428)
Q Consensus 147 MP-Gv~r~s~~~~l~~~v~~~~~-~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~Y 224 (428)
|| |-|..+.. ..++.+.++++ .|..+|-|=|- .-+...|+++.++- +=|+..+-|-|=
T Consensus 102 ~pfgsy~~s~~-~a~~na~rl~~eaGa~aVklEdg-----------------~e~~~~I~al~~ag--IpV~gHiGLtPq 161 (281)
T 1oy0_A 102 LPFGSYEAGPT-AALAAATRFLKDGGAHAVKLEGG-----------------ERVAEQIACLTAAG--IPVMAHIGFTPQ 161 (281)
T ss_dssp CCTTSSTTCHH-HHHHHHHHHHHTTCCSEEEEEBS-----------------GGGHHHHHHHHHHT--CCEEEEEECCC-
T ss_pred CCCCcccCCHH-HHHHHHHHHHHHhCCeEEEECCc-----------------HHHHHHHHHHHHCC--CCEEeeecCCcc
Confidence 66 35555664 46666666665 88888887331 13567788888774 447777778886
Q ss_pred CCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhh-hhcccccc
Q 014237 225 SSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTA-KYASSFYG 303 (428)
Q Consensus 225 TshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsa-KyASafYG 303 (428)
+.|-..|..- -|+ .| ..+.+.+.|..+.+||||+|=+-.+-.--..+|.++| +++++..-| .+++.=+=
T Consensus 162 sv~~~ggf~v-~gr--t~-~a~~~i~rA~a~~eAGA~~ivlE~vp~~~a~~it~~l------~iP~igIGaG~~~dgQvL 231 (281)
T 1oy0_A 162 SVNTLGGFRV-QGR--GD-AAEQTIADAIAVAEAGAFAVVMEMVPAELATQITGKL------TIPTVGIGAGPNCDGQVL 231 (281)
T ss_dssp ----------------CH-HHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHHHC------SSCEEEESSCSCSSEEEE
T ss_pred eecccCCeEE-EeC--cH-HHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHhC------CCCEEEeCCCCCCCccee
Confidence 6665545432 243 34 6689999999999999999987766544455566655 377777644 46665555
Q ss_pred chhhhhcCC----CCCCCccccCCCCCChHHHHHHHHhchhcCC
Q 014237 304 PFREALDSN----PRFGDKKTYQMNPANYREALVEAQADESEGA 343 (428)
Q Consensus 304 PFRdAa~Sa----p~fgDRktYQmdpaN~~EAlrE~~lDi~EGA 343 (428)
-+-|.++-. |+|- |.|----....+|+++-..|+++|.
T Consensus 232 V~~D~lG~~~~~~pkf~--k~y~~~~~~~~~a~~~y~~~V~~~~ 273 (281)
T 1oy0_A 232 VWQDMAGFSGAKTARFV--KRYADVGGELRRAAMQYAQEVAGGV 273 (281)
T ss_dssp CHHHHTTCSCSCCCTTC--CCCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred eHhhhcCCCCCCCCCch--hhhhhhHHHHHHHHHHHHHHHhcCC
Confidence 566777643 5552 3332111114556666667777764
No 52
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=87.92 E-value=5.4 Score=38.85 Aligned_cols=172 Identities=16% Similarity=0.209 Sum_probs=99.2
Q ss_pred CCCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCC-----HHHHHHHHHHHCCCeEEEeeec
Q 014237 146 AMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL-----VPRTIWLLKDRYPDLVIYTDVA 220 (428)
Q Consensus 146 SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~-----v~rAIr~iK~~~Pdl~VitDVc 220 (428)
.||+.|=+.. .+-+-+.|+..++ -|- +.- .-...+.+-++ +..-.+.+.+..+...|++|.=
T Consensus 20 ~~~tayDa~s-------A~l~e~aG~d~il-vGd---Sl~--~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~p 86 (275)
T 1o66_A 20 AMLTAYESSF-------AALMDDAGVEMLL-VGD---SLG--MAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLP 86 (275)
T ss_dssp EEEECCSHHH-------HHHHHHTTCCEEE-ECT---THH--HHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECC
T ss_pred EEEeCcCHHH-------HHHHHHcCCCEEE-ECH---HHH--HHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECC
Confidence 3777765543 2334468999774 351 100 01222333232 2345677778888878889954
Q ss_pred ccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeech------h
Q 014237 221 LDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSY------T 294 (428)
Q Consensus 221 Lc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSY------s 294 (428)
+-.|. . |.++..+.|..+.++||+.|=-.|= +-.+..||.+. ++| +++|.+ +
T Consensus 87 fgsy~--------------~---s~~~a~~na~rl~kaGa~aVklEdg-~e~~~~I~al~-~ag---IpV~gHiGLtPQs 144 (275)
T 1o66_A 87 FGAYQ--------------Q---SKEQAFAAAAELMAAGAHMVKLEGG-VWMAETTEFLQ-MRG---IPVCAHIGLTPQS 144 (275)
T ss_dssp TTSSS--------------S---CHHHHHHHHHHHHHTTCSEEEEECS-GGGHHHHHHHH-HTT---CCEEEEEESCGGG
T ss_pred CCCcc--------------C---CHHHHHHHHHHHHHcCCcEEEECCc-HHHHHHHHHHH-HcC---CCeEeeeccCcee
Confidence 33330 1 2344556666788899999976653 11355555544 455 345533 2
Q ss_pred hhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEE
Q 014237 295 AKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAY 372 (428)
Q Consensus 295 aKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaY 372 (428)
.. -.|-|+=- | | + ...+++|+.+..=.+-|||+|.+ ++.+ -++++++.+..++|+...
T Consensus 145 ~~----~~ggf~v~-------g-r-t-----~~a~~~i~rA~a~~eAGA~~ivl-E~vp-~~~a~~it~~l~iP~igI 202 (275)
T 1o66_A 145 VF----AFGGYKVQ-------G-R-G-----GKAQALLNDAKAHDDAGAAVVLM-ECVL-AELAKKVTETVSCPTIGI 202 (275)
T ss_dssp TT----C-------------------------CHHHHHHHHHHHHHTTCSEEEE-ESCC-HHHHHHHHHHCSSCEEEE
T ss_pred ec----ccCCeEEE-------e-C-h-----HHHHHHHHHHHHHHHcCCcEEEE-ecCC-HHHHHHHHHhCCCCEEEE
Confidence 21 01222210 0 1 1 12488999988888999999987 4456 599999999999999864
No 53
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=87.76 E-value=1.7 Score=42.61 Aligned_cols=165 Identities=22% Similarity=0.238 Sum_probs=98.9
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEee-cCCCCCCCcccCcCcCCCCCH-----HHHHHHHHHHCCCeEEEeeec
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFP-KVPDALKSPTGDEAYNDNGLV-----PRTIWLLKDRYPDLVIYTDVA 220 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFg-vi~~~~KD~~Gs~A~~~~g~v-----~rAIr~iK~~~Pdl~VitDVc 220 (428)
|||+|=... .+-+.+.|++.+++=| -+. .+..+.+.+++ ...++.|.+.. ++-|++|.=
T Consensus 33 ~~~ayD~~s-------A~l~e~aG~dai~vs~~s~a-------~~~G~pD~~~vt~~em~~~~~~I~r~~-~~pviaD~d 97 (305)
T 3ih1_A 33 IPGAHDAMA-------ALVARNTGFLALYLSGAAYT-------ASKGLPDLGIVTSTEVAERARDLVRAT-DLPVLVDID 97 (305)
T ss_dssp EEBCSSHHH-------HHHHHHTTCSCEEECHHHHH-------HHHTCCSSSCSCHHHHHHHHHHHHHHH-CCCEEEECT
T ss_pred EecCcCHHH-------HHHHHHcCCCEEEECcHHHH-------HhCCCCCCCcCCHHHHHHHHHHHHHhc-CCCEEEECC
Confidence 777754432 2223457999988843 111 01223333443 34455555554 466888863
Q ss_pred ccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC--------C--------chHHHHHHHHHHCC
Q 014237 221 LDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM--------D--------GRVGAIRAALDAEG 284 (428)
Q Consensus 221 Lc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMM--------D--------GRV~aIR~aLD~~G 284 (428)
. |+- |. ....+.+-.+.++||+.|--.|=. + -.+..||.+.+. |
T Consensus 98 ~---------------Gyg-~~---~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~ 157 (305)
T 3ih1_A 98 T---------------GFG-GV---LNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-A 157 (305)
T ss_dssp T---------------CSS-SH---HHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-C
T ss_pred C---------------CCC-CH---HHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-C
Confidence 2 221 22 223445556678999988655532 2 124555555554 4
Q ss_pred CCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhh
Q 014237 285 FQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDK 364 (428)
Q Consensus 285 f~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~ 364 (428)
.+..|++-+--++. ...+|||+.+..=.+-|||+|++ |+.+-+|.++++.+.
T Consensus 158 -~~~~I~ARtda~~~--------------------------~g~~~ai~Ra~ay~eAGAD~i~~-e~~~~~~~~~~i~~~ 209 (305)
T 3ih1_A 158 -PSLYIVARTDARGV--------------------------EGLDEAIERANAYVKAGADAIFP-EALQSEEEFRLFNSK 209 (305)
T ss_dssp -TTSEEEEEECCHHH--------------------------HCHHHHHHHHHHHHHHTCSEEEE-TTCCSHHHHHHHHHH
T ss_pred -CCeEEEEeeccccc--------------------------cCHHHHHHHHHHHHHcCCCEEEE-cCCCCHHHHHHHHHH
Confidence 34555544332210 23789999988888889999999 788889999999999
Q ss_pred CCCCeEEEEe
Q 014237 365 YPLPIAAYQV 374 (428)
Q Consensus 365 ~~lPvaaYqV 374 (428)
+++|+.+=-+
T Consensus 210 ~~~P~~~n~~ 219 (305)
T 3ih1_A 210 VNAPLLANMT 219 (305)
T ss_dssp SCSCBEEECC
T ss_pred cCCCEEEeec
Confidence 9999965333
No 54
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=87.72 E-value=5.2 Score=35.90 Aligned_cols=44 Identities=14% Similarity=0.052 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY 210 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~ 210 (428)
.+.+.++.+.+.|+..+=| ++ +|..=-... ..| .+.++.|++.+
T Consensus 24 ~~~~~i~~~~~~G~d~i~l-~~-----~dg~f~~~~-~~~--~~~i~~l~~~~ 67 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHV-DV-----MDGRFVPNI-TIG--PLVVDSLRPIT 67 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEE-EE-----EBSSSSSCB-CCC--HHHHHHHGGGC
T ss_pred HHHHHHHHHHHCCCCEEEE-ee-----ccCCccccc-ccC--HHHHHHHHhcc
Confidence 4788999999999977544 42 110000001 123 47788888775
No 55
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=87.56 E-value=0.92 Score=43.20 Aligned_cols=43 Identities=21% Similarity=0.246 Sum_probs=30.9
Q ss_pred CCCChHHHHHHHHhchhcCCceEEec------------------------------CC--------CchHHHHHHHHhhC
Q 014237 324 NPANYREALVEAQADESEGADILLVK------------------------------PG--------LPYLDVIRLLRDKY 365 (428)
Q Consensus 324 dpaN~~EAlrE~~lDi~EGADilMVK------------------------------Pa--------l~YLDII~~vk~~~ 365 (428)
+..|..|+++. +++|||+|.++ .. ..-++.++++++..
T Consensus 131 ~~~~~~e~~~a----~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~ 206 (305)
T 2nv1_A 131 GCRDLGEATRR----IAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDG 206 (305)
T ss_dssp EESSHHHHHHH----HHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHT
T ss_pred EeCCHHHHHHH----HHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhc
Confidence 34566777665 37899999983 22 12378899999888
Q ss_pred CCCeE
Q 014237 366 PLPIA 370 (428)
Q Consensus 366 ~lPva 370 (428)
++||.
T Consensus 207 ~iPvi 211 (305)
T 2nv1_A 207 KLPVV 211 (305)
T ss_dssp SCSSC
T ss_pred CCCEE
Confidence 89986
No 56
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=87.01 E-value=4.8 Score=38.96 Aligned_cols=165 Identities=21% Similarity=0.271 Sum_probs=108.5
Q ss_pred CCC-ceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCC
Q 014237 147 MPG-CYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYS 225 (428)
Q Consensus 147 MPG-v~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YT 225 (428)
||- -|. +.. ..++.+.++.+.|..+|-|=| | .-+...|+++.++- +=|+.=+-|-|=+
T Consensus 85 ~pfgsy~-~~~-~a~~~a~rl~kaGa~aVklEg----------g-------~e~~~~I~al~~ag--ipV~gHiGLtPq~ 143 (264)
T 1m3u_A 85 LPFMAYA-TPE-QAFENAATVMRAGANMVKIEG----------G-------EWLVETVQMLTERA--VPVCGHLGLTPQS 143 (264)
T ss_dssp CCTTSSS-SHH-HHHHHHHHHHHTTCSEEECCC----------S-------GGGHHHHHHHHHTT--CCEEEEEESCGGG
T ss_pred CCCCCcC-CHH-HHHHHHHHHHHcCCCEEEECC----------c-------HHHHHHHHHHHHCC--CCeEeeecCCcee
Confidence 664 566 775 588889999999999987722 1 13567788888764 3355444455543
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhh-hhccccccc
Q 014237 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTA-KYASSFYGP 304 (428)
Q Consensus 226 shGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsa-KyASafYGP 304 (428)
.|-..|..- -| ..|+..+.+.+.|..+.+||||+|=+..+-.--..+|.++| +++++..-| .+++.=+=-
T Consensus 144 v~~~ggf~v-~g--rt~~~a~~~i~rA~a~~eAGA~~ivlE~vp~~~a~~it~~l------~iP~igIGag~~~dgQvLV 214 (264)
T 1m3u_A 144 VNIFGGYKV-QG--RGDEAGDQLLSDALALEAAGAQLLVLECVPVELAKRITEAL------AIPVIGIGAGNVTDGQILV 214 (264)
T ss_dssp HHHHTSSCC-CC--CSHHHHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHC------SSCEEEESSCTTSSEEEEC
T ss_pred ecccCCeEE-Ee--CCHHHHHHHHHHHHHHHHCCCcEEEEecCCHHHHHHHHHhC------CCCEEEeCCCCCCCcceee
Confidence 332222211 12 24667799999999999999999987766544455566655 377777644 466655555
Q ss_pred hhhhhcC----CCCCCCccccCCCCCChHHHHHHHHhchhcCC
Q 014237 305 FREALDS----NPRFGDKKTYQMNPANYREALVEAQADESEGA 343 (428)
Q Consensus 305 FRdAa~S----ap~fgDRktYQmdpaN~~EAlrE~~lDi~EGA 343 (428)
+-|.++- .|+| -|.|----....+|+++-..|+++|.
T Consensus 215 ~~D~lG~~~~~~pkf--~k~y~~~~~~~~~a~~~y~~~V~~~~ 255 (264)
T 1m3u_A 215 MHDAFGITGGHIPKF--AKNFLAETGDIRAAVRQYMAEVESGV 255 (264)
T ss_dssp HHHHTTCSCSSCCTT--CCCSSTTTSSHHHHHHHHHHHHHHTC
T ss_pred HHhhcCCCCCCCCCc--chhhhhhHHHHHHHHHHHHHHHhcCC
Confidence 6677764 4566 35564333457899999999998885
No 57
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=86.67 E-value=4 Score=39.18 Aligned_cols=109 Identities=14% Similarity=0.232 Sum_probs=72.5
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.||- +.++.|++ -+.++|+|-|.+.+. .+=|...++.+.+..+ .+++|+.=
T Consensus 24 ~~dg~iD~-~~l~~lv~---~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaG------------ 86 (303)
T 2wkj_A 24 DQQQALDK-ASLRRLVQ---FNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAH------------ 86 (303)
T ss_dssp CTTSSBCH-HHHHHHHH---HHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEE------------
T ss_pred CCCCCcCH-HHHHHHHH---HHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe------------
Confidence 35688873 34444444 456789999877553 2357888888887765 37888763
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCC-CCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYP-LPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~-lPvaaYqVSG 376 (428)
+++ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.++ +|+..||+-|
T Consensus 87 ---vg~--------------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~ 148 (303)
T 2wkj_A 87 ---VGC--------------VSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPA 148 (303)
T ss_dssp ---CCC--------------SSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHH
T ss_pred ---cCC--------------CCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCcc
Confidence 221 15688887776666679999998654221 344456777888 9999999744
No 58
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=86.07 E-value=2.8 Score=40.78 Aligned_cols=166 Identities=27% Similarity=0.306 Sum_probs=99.7
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEeec-CCCCCCCcccCcCcCCCCC-----HHHHHHHHHHHCCCeEEEeeec
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPK-VPDALKSPTGDEAYNDNGL-----VPRTIWLLKDRYPDLVIYTDVA 220 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgv-i~~~~KD~~Gs~A~~~~g~-----v~rAIr~iK~~~Pdl~VitDVc 220 (428)
|||+|=... ..-+.+.|++.+.+=|- +.. .+..+.+-++ +...++.|.+..+ +-|++|.=
T Consensus 21 ~~~a~D~~s-------A~~~~~aG~~ai~vs~~~~a~------~~~G~pD~~~vt~~em~~~~~~I~~~~~-~PviaD~d 86 (295)
T 1xg4_A 21 IVGTINANH-------ALLAQRAGYQAIYLSGGGVAA------GSLGLPDLGISTLDDVLTDIRRITDVCS-LPLLVDAD 86 (295)
T ss_dssp EEECSSHHH-------HHHHHHTTCSCEEECHHHHHH------TTTCCCSSSCSCHHHHHHHHHHHHHHCC-SCEEEECT
T ss_pred EecCcCHHH-------HHHHHHcCCCEEEECchHhhh------hhcCCCCCCCCCHHHHHHHHHHHHhhCC-CCEEecCC
Confidence 677754432 23344579999988332 110 0122333233 3356667776664 45888863
Q ss_pred ccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC--------Cc--------hHHHHHHHHHHCC
Q 014237 221 LDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM--------DG--------RVGAIRAALDAEG 284 (428)
Q Consensus 221 Lc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMM--------DG--------RV~aIR~aLD~~G 284 (428)
. |+=+|-+.+ .+.+-.+.++||+.|--.|=. .| .+..||.+.+...
T Consensus 87 ~---------------Gyg~~~~~~---~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~ 148 (295)
T 1xg4_A 87 I---------------GFGSSAFNV---ARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKT 148 (295)
T ss_dssp T---------------CSSSSHHHH---HHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCS
T ss_pred c---------------ccCCCHHHH---HHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhcc
Confidence 2 321233333 344445557899988766542 11 3445555555553
Q ss_pred CCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhh
Q 014237 285 FQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDK 364 (428)
Q Consensus 285 f~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~ 364 (428)
..+.-|++-.--++. ...+|+|+.+..=.+-|||+|++- +.+-.|.++++.+.
T Consensus 149 ~~~~~i~aRtda~~~--------------------------~gl~~ai~ra~ay~eAGAd~i~~e-~~~~~~~~~~i~~~ 201 (295)
T 1xg4_A 149 DPDFVIMARTDALAV--------------------------EGLDAAIERAQAYVEAGAEMLFPE-AITELAMYRQFADA 201 (295)
T ss_dssp STTSEEEEEECCHHH--------------------------HCHHHHHHHHHHHHHTTCSEEEET-TCCSHHHHHHHHHH
T ss_pred CCCcEEEEecHHhhh--------------------------cCHHHHHHHHHHHHHcCCCEEEEe-CCCCHHHHHHHHHH
Confidence 334445544332220 146889999988889999999985 67889999999999
Q ss_pred CCCCeEE
Q 014237 365 YPLPIAA 371 (428)
Q Consensus 365 ~~lPvaa 371 (428)
.++|+.+
T Consensus 202 ~~iP~~~ 208 (295)
T 1xg4_A 202 VQVPILA 208 (295)
T ss_dssp HCSCBEE
T ss_pred cCCCEEE
Confidence 9999976
No 59
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=86.06 E-value=11 Score=40.98 Aligned_cols=195 Identities=15% Similarity=0.113 Sum_probs=100.5
Q ss_pred eEEEeeCCCCcccCCCCCceeechhhhHHHHHHHHHHc--CCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHH
Q 014237 132 PLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDV--GVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDR 209 (428)
Q Consensus 132 PlFV~eg~~~~~I~SMPGv~r~s~~~~l~~~v~~~~~~--GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~ 209 (428)
.|.|.|..=+.- ..-+|..|++.+ +.++.++.+.++ |+.+|=.-|- . .-| ....|-.+++ -..++.|++.
T Consensus 102 ~I~I~DTTLRDG-~Qs~~~~r~~~e-dkl~Ia~~Ld~~Gvg~~~IE~gGG-a--tfd--~~~~f~~e~p-~e~l~~l~~~ 173 (718)
T 3bg3_A 102 GLLLMDTTFRDA-HQSLLATRVRTH-DLKKIAPYVAHNFSKLFSMENWGG-A--TFD--VAMRFLYECP-WRRLQELREL 173 (718)
T ss_dssp SCEEEECTTTHH-HHHHSTTCCCHH-HHHHHHHHHHHHCTTCSEEEEEET-T--HHH--HHHHTSCCCH-HHHHHHHHHH
T ss_pred CeEEeecCCChh-hCCCCCcCCCHH-HHHHHHHHHHHhcCCCcEEEecCC-c--chh--hccccCCCCH-HHHHHHHHHH
Confidence 467777541111 124566678886 588999999998 5777776321 0 000 0000111122 3578899999
Q ss_pred CCCeEEEe--ee-cccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHH---HHHC
Q 014237 210 YPDLVIYT--DV-ALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAA---LDAE 283 (428)
Q Consensus 210 ~Pdl~Vit--DV-cLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~a---LD~~ 283 (428)
.|+..+.+ -. +++-||.. .+ . ..++.++..+ ++|+|+|--.+-+. .+..++.. ..+.
T Consensus 174 ~~~~~l~~l~R~~n~vgy~~~-----p~---~-~~~~~i~~a~-------~~Gvd~irIf~s~n-~l~~l~~~i~~ak~~ 236 (718)
T 3bg3_A 174 IPNIPFQMLLRGANAVGYTNY-----PD---N-VVFKFCEVAK-------ENGMDVFRVFDSLN-YLPNMLLGMEAAGSA 236 (718)
T ss_dssp CSSSCEEEEECGGGTTSSSCC-----CH---H-HHHHHHHHHH-------HHTCCEEEEECSSC-CHHHHHHHHHHHHTT
T ss_pred cccchHHHHhccccccccccc-----CC---c-chHHHHHHHH-------hcCcCEEEEEecHH-HHHHHHHHHHHHHHc
Confidence 99854432 11 34455421 10 0 0144444433 46999864433222 23334333 3345
Q ss_pred CCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEec-------CCCchHH
Q 014237 284 GFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVK-------PGLPYLD 356 (428)
Q Consensus 284 Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-------Pal~YLD 356 (428)
|..-..-++|+. .|..|||.. | +.+..+.-+..=++-|||.|-+| |. .+-+
T Consensus 237 G~~v~~~i~~~~----d~~dp~r~~------------~-----~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~-~v~~ 294 (718)
T 3bg3_A 237 GGVVEAAISYTG----DVADPSRTK------------Y-----SLQYYMGLAEELVRAGTHILCIKDMAGLLKPT-ACTM 294 (718)
T ss_dssp TSEEEEEEECCS----CTTCTTCCT------------T-----CHHHHHHHHHHHHHHTCSEEEEECTTSCCCHH-HHHH
T ss_pred CCeEEEEEEeec----cccCCCCCC------------C-----CHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHH-HHHH
Confidence 632222244443 233344311 1 33333333333345699999887 43 3468
Q ss_pred HHHHHHhhC-CCCeEEEEe
Q 014237 357 VIRLLRDKY-PLPIAAYQV 374 (428)
Q Consensus 357 II~~vk~~~-~lPvaaYqV 374 (428)
+|+.+|+++ ++|+. +|-
T Consensus 295 lV~~lk~~~p~~~I~-~H~ 312 (718)
T 3bg3_A 295 LVSSLRDRFPDLPLH-IHT 312 (718)
T ss_dssp HHHHHHHHSTTCCEE-EEC
T ss_pred HHHHHHHhCCCCeEE-EEE
Confidence 999999999 68874 444
No 60
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=85.40 E-value=6.6 Score=31.42 Aligned_cols=91 Identities=15% Similarity=0.143 Sum_probs=58.0
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCch------hhHH
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDE------QRVM 396 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~------~~~v 396 (428)
|..||+..+.. ...|+|++= |++.-+++++.+++.. .+|+...--..+...+..+.+.|..|. ...+
T Consensus 49 ~~~~a~~~l~~---~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l 125 (152)
T 3eul_A 49 DGAAALELIKA---HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEI 125 (152)
T ss_dssp SHHHHHHHHHH---HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHHHH
T ss_pred CHHHHHHHHHh---cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEecCCCHHHH
Confidence 66777776643 468999986 7777899999999877 599999988888888888888887542 3455
Q ss_pred HHHHHHHHHhcccEeehhcHHHHHHHHhc
Q 014237 397 MESLMCLRRAGADIILTYFALQAARCLCG 425 (428)
Q Consensus 397 lEsL~~~kRAGAd~IiTYfA~e~a~wL~~ 425 (428)
.+.+..+.+-+ +|+.+++++.|.+
T Consensus 126 ~~~i~~~~~~~-----~~~~~~~~~~l~~ 149 (152)
T 3eul_A 126 VKAVLDCAKGR-----DVVAPSLVGGLAG 149 (152)
T ss_dssp HHHHHHHHHCC------------------
T ss_pred HHHHHHHHcCC-----eeeCHHHHHHHhh
Confidence 56665555543 4566666655543
No 61
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=85.36 E-value=5.7 Score=39.23 Aligned_cols=115 Identities=14% Similarity=0.029 Sum_probs=73.9
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCc---CcCCCCCHHHHHHHHHHHC--CCeEEEeeecc
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDE---AYNDNGLVPRTIWLLKDRY--PDLVIYTDVAL 221 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~---A~~~~g~v~rAIr~iK~~~--Pdl~VitDVcL 221 (428)
||.=|- +.. .+.+.++++.+.|+-.|.|=+-+.. +| +|.- ..-|-.....-|++++++. ++..|++=
T Consensus 108 ~d~Gyg-~~~-~v~~tv~~l~~aGaagv~iED~~~~-k~--cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~AR--- 179 (318)
T 1zlp_A 108 GDTGGG-GPL-NVQRFIRELISAGAKGVFLEDQVWP-KK--CGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVAR--- 179 (318)
T ss_dssp CTTCSS-SHH-HHHHHHHHHHHTTCCEEEEECBCSS-CC--CSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEE---
T ss_pred CCCCCC-CHH-HHHHHHHHHHHcCCcEEEECCCCCC-cc--ccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEe---
Confidence 443355 554 5899999999999999998554311 11 2211 1222223444566676664 45555432
Q ss_pred cCCCCCCcceeecCCCcccc--HHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHHHCCCCCceeec
Q 014237 222 DPYSSDGHDGIVREDGVIMN--DETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALDAEGFQHVSIMS 292 (428)
Q Consensus 222 c~YTshGHcGil~~~g~IdN--D~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD~~Gf~~v~IMS 292 (428)
.|. ..-++.+.+-|..|++||||+|-+-.+-| -.+..|.++|+ +++|.
T Consensus 180 -----------------tda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~------~P~la 230 (318)
T 1zlp_A 180 -----------------TDARAPHGLEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKTK------GLRIA 230 (318)
T ss_dssp -----------------ECTHHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSC------SEEEE
T ss_pred -----------------eHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhcC------CCEEE
Confidence 222 23477888999999999999998887877 67777777773 67754
No 62
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=85.28 E-value=1 Score=42.94 Aligned_cols=77 Identities=21% Similarity=0.277 Sum_probs=47.7
Q ss_pred HHHHhchhcCCceEEecCCCch---------------------------HHHHHHHHhhCCCCeEE--E-E-ec--hHHH
Q 014237 333 VEAQADESEGADILLVKPGLPY---------------------------LDVIRLLRDKYPLPIAA--Y-Q-VS--GEYS 379 (428)
Q Consensus 333 rE~~lDi~EGADilMVKPal~Y---------------------------LDII~~vk~~~~lPvaa--Y-q-VS--GEYa 379 (428)
.+...-++||||+|++ +.|| +++|+++|+..++|+.. | + |- |.-.
T Consensus 33 ~~~~~~l~~~aD~IEl--G~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~ 110 (271)
T 1ujp_A 33 LQAVEEVLPYADLLEI--GLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAWGPER 110 (271)
T ss_dssp HHHHHHHGGGCSSEEE--ECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHHHHHHCHHH
T ss_pred HHHHHHHHhcCCEEEE--CCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHhhHHH
Confidence 3344556677999999 7777 58899999998999998 3 3 21 3334
Q ss_pred HHHHHHHCCCCc----hh---hHHHHHHHHHHHhcccEee
Q 014237 380 MIKAGGALKMID----EQ---RVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 380 MIkaAa~~G~iD----~~---~~vlEsL~~~kRAGAd~Ii 412 (428)
.++.+++.|. | .+ +-..|....+++.|-+.|.
T Consensus 111 f~~~~~~aG~-dGviv~Dl~~ee~~~~~~~~~~~gl~~i~ 149 (271)
T 1ujp_A 111 FFGLFKQAGA-TGVILPDLPPDEDPGLVRLAQEIGLETVF 149 (271)
T ss_dssp HHHHHHHHTC-CEEECTTCCGGGCHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHcCC-CEEEecCCCHHHHHHHHHHHHHcCCceEE
Confidence 4455555553 3 10 1234445556666655443
No 63
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=85.09 E-value=9.8 Score=39.99 Aligned_cols=257 Identities=13% Similarity=0.098 Sum_probs=154.4
Q ss_pred EEEeeCCCCccc--CCCCCcee-echh-hhHHHHHHH-HHHcCCCeEEE--eecCCCCCCCcccCcCcCCCCCHHHHHHH
Q 014237 133 LFIHEGEEDTPI--GAMPGCYR-LGWR-HGLVQEVAK-ARDVGVNSVVL--FPKVPDALKSPTGDEAYNDNGLVPRTIWL 205 (428)
Q Consensus 133 lFV~eg~~~~~I--~SMPGv~r-~s~~-~~l~~~v~~-~~~~GI~sv~L--Fgvi~~~~KD~~Gs~A~~~~g~v~rAIr~ 205 (428)
++|.||---..+ ..+++..- |+++ .++++.+.+ -++.|-.-+.- |+.-+...+ ..|-+ ..-.-+..+|++.
T Consensus 15 ililDGamGT~L~~~g~~~~~el~~l~~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~-~~g~~-~~~~el~~~av~l 92 (566)
T 1q7z_A 15 VLLLDGAYGTEFMKYGYDDLPEELNIKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLR-KHGLE-DKLDPIVRNAVRI 92 (566)
T ss_dssp CEECCCCSHHHHHHTTCCSCGGGHHHHCHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHG-GGTCG-GGHHHHHHHHHHH
T ss_pred eEEEEChHHHHHHHCCCCCCchhhcccCHHHHHHHHHHHHHhhcceeecCcccCCHHHHH-hcCch-HHHHHHHHHHHHH
Confidence 677787521111 23444322 2332 235555544 67899873332 443221111 12211 1112367789999
Q ss_pred HHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHHHCC
Q 014237 206 LKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALDAEG 284 (428)
Q Consensus 206 iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD~~G 284 (428)
.|+...+=+|..+ +.||... +...|.+.-|+-.+...+|+-.++++|+|++.=--|.| -...++..++.+.
T Consensus 93 Ar~a~~~~~VAGs--iGP~g~~-----~~~~~~~~~~e~~~~~~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~- 164 (566)
T 1q7z_A 93 ARRAAGEKLVFGD--IGPTGEL-----PYPLGSTLFEEFYENFRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREV- 164 (566)
T ss_dssp HHHHHTTSEEEEE--ECCCSCC-----BTTTSSBCHHHHHHHHHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHH-
T ss_pred HHHHHhCCeEEEe--CCCcccC-----CCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHh-
Confidence 9877532155554 4577663 12235667788889999999999999999999999988 4566777777664
Q ss_pred CCCceee-chhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCC---chHHHHHH
Q 014237 285 FQHVSIM-SYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGL---PYLDVIRL 360 (428)
Q Consensus 285 f~~v~IM-SYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal---~YLDII~~ 360 (428)
|.++++| |++.+ . ...-++=....+++..+.. .|+|.|.+-=+. ....+|+.
T Consensus 165 ~~~~Pv~vS~t~~-~--------------------~g~~~~G~~~~~~~~~l~~---~~~~avG~NC~~gp~~~~~~l~~ 220 (566)
T 1q7z_A 165 SRDVFLIAHMTFD-E--------------------KGRSLTGTDPANFAITFDE---LDIDALGINCSLGPEEILPIFQE 220 (566)
T ss_dssp CSSSCEEEEECCC-T--------------------TSCCTTSCCHHHHHHHHHT---SSCSEEEEESSSCHHHHHHHHHH
T ss_pred CCCCcEEEEEEEc-C--------------------CCeeCCCCcHHHHHHHhhc---cCCCEEEEeCCCCHHHHHHHHHH
Confidence 4455553 33321 1 1122333356777776653 589999997653 23778888
Q ss_pred HHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEee-----h-hcHHHHHHHHhc
Q 014237 361 LRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIIL-----T-YFALQAARCLCG 425 (428)
Q Consensus 361 vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii-----T-YfA~e~a~wL~~ 425 (428)
+++..+.|+.+|==+|+-... . ....|-...+.+.+.+..+..+|+.+|= | .+-..+++++++
T Consensus 221 l~~~~~~p~~vyPNaG~p~~~-~-~~~~~~~~p~~~a~~~~~~~~~G~~iiGGCCGTtP~hI~aia~~~~~ 289 (566)
T 1q7z_A 221 LSQYTDKFLVVEPNAGKPIVE-N-GKTVYPLKPHDFAVHIDSYYELGVNIFGGCCGTTPEHVKLFRKVLGN 289 (566)
T ss_dssp HHHTCCSEEEEECCSSSCEEE-T-TEEECCCCHHHHHTTHHHHHHTTCSEECCCTTCCHHHHHHHHHHHCS
T ss_pred HHhcCCCEEEEEcCCCCCccc-C-CccccCCCHHHHHHHHHHHHHcCCcEEccccCCCHHHHHHHHHHhcC
Confidence 888889999999888754110 0 1112322235577888889999998873 1 344556677754
No 64
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=85.08 E-value=1.3 Score=40.75 Aligned_cols=151 Identities=19% Similarity=0.156 Sum_probs=81.0
Q ss_pred cCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC
Q 014237 189 GDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM 268 (428)
Q Consensus 189 Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM 268 (428)
|.+-|- .|+ ..++.||+. +..|+.|+=+ + |--.|+...++.+ +++|||+|.=+-.
T Consensus 40 g~~l~~-~G~--~~v~~l~~~--~~~v~lD~K~---------------~--DI~nT~~~~v~~~---~~~GaD~vTvh~~ 94 (213)
T 1vqt_A 40 GHNLAI-HGK--KIFDELAKR--NLKIILDLKF---------------C--DIPSTVERSIKSW---DHPAIIGFTVHSC 94 (213)
T ss_dssp CHHHHT-TCT--HHHHHHHTT--TCEEEEEEEE---------------C--SCHHHHHHHHHHH---CCTTEEEEEEEGG
T ss_pred CHHHHh-hCH--HHHHHHHHC--CCCEEEEeec---------------c--cCchHHHHHHHHH---HHCCCCEEEEecc
Confidence 334444 554 468888875 6788888754 2 2344565555444 4899999965544
Q ss_pred CCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEe
Q 014237 269 MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLV 348 (428)
Q Consensus 269 MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMV 348 (428)
+.- ..|+.+++...-..+.+.- -.+..+++ | +...+.+.+ .+-|+| .|
T Consensus 95 ~G~--~~l~~~~~~~~~~~~~V~~-----lts~~~~l----------------~------~~v~~~a~~-~e~G~d--vV 142 (213)
T 1vqt_A 95 AGY--ESVERALSATDKHVFVVVK-----LTSMEGSL----------------E------DYMDRIEKL-NKLGCD--FV 142 (213)
T ss_dssp GCH--HHHHHHHHHCSSEEEEECC-----CTTSCCCH----------------H------HHHHHHHHH-HHHTCE--EE
T ss_pred CCH--HHHHHHHHhcCCCeEEEEE-----eCCCCHHH----------------H------HHHHHHHHH-hcCCCE--EE
Confidence 432 2455555554300111110 01111111 1 555666667 778999 44
Q ss_pred cCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEee
Q 014237 349 KPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 349 KPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
+.+ +-++++|+.++-| .|.|=+-.- .+-=|.++++ +... .+||||+|+
T Consensus 143 ~~~----~~~~~ir~~~~~~----~v~pGI~~~-----~~~~dq~rv~--t~~~-i~aGad~iV 190 (213)
T 1vqt_A 143 LPG----PWAKALREKIKGK----ILVPGIRME-----VKADDQKDVV--TLEE-MKGIANFAV 190 (213)
T ss_dssp CCH----HHHHHHTTTCCSC----EEECCBC--------------CCB--CHHH-HTTTCSEEE
T ss_pred EcH----HHHHHHHHHCCCC----EEECCCCCC-----CCccchhhcC--CHHH-HHCCCCEEE
Confidence 433 6778888887666 565533211 1101333333 6667 799999987
No 65
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=85.05 E-value=27 Score=34.29 Aligned_cols=33 Identities=15% Similarity=0.063 Sum_probs=25.6
Q ss_pred hhcCCceEEecCCC------chHHHHHHHHhhCCCCeEE
Q 014237 339 ESEGADILLVKPGL------PYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 339 i~EGADilMVKPal------~YLDII~~vk~~~~lPvaa 371 (428)
.+.|+|.|-|=.+. .-++.++.+|+.+++||++
T Consensus 260 ~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~ 298 (365)
T 2gou_A 260 NKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIY 298 (365)
T ss_dssp HHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEE
T ss_pred HHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEE
Confidence 35799999885431 1269999999999999875
No 66
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=84.89 E-value=11 Score=33.72 Aligned_cols=68 Identities=18% Similarity=0.308 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCc
Q 014237 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (428)
Q Consensus 159 l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~ 238 (428)
-.+.++++.+.|...|.|-.. ..+++. +..+.+.++.+|+.+|++.|+.++.
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~---~~~~~~-------~~~~~~~i~~i~~~~~~~~v~~~~~------------------ 141 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCT---KRDRHD-------GLDIASFIRQVKEKYPNQLLMADIS------------------ 141 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECC---SSCCTT-------CCCHHHHHHHHHHHCTTCEEEEECS------------------
T ss_pred hHHHHHHHHHcCCCEEEEccc---ccCCCC-------CccHHHHHHHHHHhCCCCeEEEeCC------------------
Confidence 367789999999997765432 122111 2367889999999999988887652
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCee
Q 014237 239 IMNDETVHQLCKQAVSQARAGADVV 263 (428)
Q Consensus 239 IdND~Tl~~Lak~Als~A~AGADiV 263 (428)
|+ +.+....++|||+|
T Consensus 142 -----t~----~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 142 -----TF----DEGLVAHQAGIDFV 157 (234)
T ss_dssp -----SH----HHHHHHHHTTCSEE
T ss_pred -----CH----HHHHHHHHcCCCEE
Confidence 11 12566678999999
No 67
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=84.88 E-value=4.2 Score=39.02 Aligned_cols=111 Identities=22% Similarity=0.365 Sum_probs=67.5
Q ss_pred CCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhch-hcCCc
Q 014237 266 SDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADE-SEGAD 344 (428)
Q Consensus 266 SDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi-~EGAD 344 (428)
|.||. |+...=+.|.++| +-.++.|-. + ||- |.+.. .+...-+ +-|||
T Consensus 1 ~~mm~-ri~~~f~~~~~~~--~~ali~yi~-------------a------GdP--------~~~~~-~~~~~~l~~~GaD 49 (271)
T 3nav_A 1 SNAMN-RYQALFQRLSAAQ--QGAFVPFVT-------------I------GDP--------NPEQS-LAIMQTLIDAGAD 49 (271)
T ss_dssp --CCC-HHHHHHHHHHHTT--BCEEEEEEE-------------T------TSS--------CHHHH-HHHHHHHHHTTCS
T ss_pred CcHHH-HHHHHHHHHHhcC--CCeEEEEEe-------------C------CCC--------CHHHH-HHHHHHHHHcCCC
Confidence 67885 7777767777776 456677641 1 331 22222 2222233 45899
Q ss_pred eEEecCCCch---------------------------HHHHHHHHhh-CCCCeEE--EE----echHHHHHHHHHHCCCC
Q 014237 345 ILLVKPGLPY---------------------------LDVIRLLRDK-YPLPIAA--YQ----VSGEYSMIKAGGALKMI 390 (428)
Q Consensus 345 ilMVKPal~Y---------------------------LDII~~vk~~-~~lPvaa--Yq----VSGEYaMIkaAa~~G~i 390 (428)
+|-+ +.|| ||+++++|++ .++|+.. |- --|.-..++.++++|.
T Consensus 50 ~iEl--GiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGv- 126 (271)
T 3nav_A 50 ALEL--GMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGV- 126 (271)
T ss_dssp SEEE--ECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTC-
T ss_pred EEEE--CCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCC-
Confidence 9866 4444 8999999998 6899966 42 1366666777777774
Q ss_pred ch--------hhHHHHHHHHHHHhcccEe
Q 014237 391 DE--------QRVMMESLMCLRRAGADII 411 (428)
Q Consensus 391 D~--------~~~vlEsL~~~kRAGAd~I 411 (428)
|. ++ .-|....+++.|-+.|
T Consensus 127 dGvIipDlp~ee-~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 127 DSVLIADVPTNE-SQPFVAAAEKFGIQPI 154 (271)
T ss_dssp CEEEETTSCGGG-CHHHHHHHHHTTCEEE
T ss_pred CEEEECCCCHHH-HHHHHHHHHHcCCeEE
Confidence 21 22 4566777888888865
No 68
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=84.16 E-value=2.9 Score=40.82 Aligned_cols=141 Identities=18% Similarity=0.176 Sum_probs=79.6
Q ss_pred HHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCc--cccCCCCCChH
Q 014237 252 AVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDK--KTYQMNPANYR 329 (428)
Q Consensus 252 Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDR--ktYQmdpaN~~ 329 (428)
|....+||.|+|.-.|- ++. -..|+.++..++..-=-.- =.--+.++..++--.|= -+||.+| .
T Consensus 47 A~l~e~aG~d~ilvGdS----l~~-----~~lG~~dt~~vTldemi~h--~~aV~r~~~~~~vvaD~pfgsy~~s~---~ 112 (281)
T 1oy0_A 47 ARIFDEAGIPVLLVGDS----AAN-----VVYGYDTTVPISIDELIPL--VRGVVRGAPHALVVADLPFGSYEAGP---T 112 (281)
T ss_dssp HHHHHTTTCCEEEECTT----HHH-----HTTCCSSSSSCCGGGTHHH--HHHHHHHCTTSEEEEECCTTSSTTCH---H
T ss_pred HHHHHHcCCCEEEECHH----HHH-----HHcCCCCCCCCCHHHHHHH--HHHHHhcCCCCeEEEECCCCcccCCH---H
Confidence 44455789999974332 222 2457766655443211000 00122333322221221 1777654 7
Q ss_pred HHHHHHHhchh-cCCceEEecCCCchHHHHHHHHhhCCCCeEE--------EEechHHHHHHHHHHCCCCchhhHHHHHH
Q 014237 330 EALVEAQADES-EGADILLVKPGLPYLDVIRLLRDKYPLPIAA--------YQVSGEYSMIKAGGALKMIDEQRVMMESL 400 (428)
Q Consensus 330 EAlrE~~lDi~-EGADilMVKPal~YLDII~~vk~~~~lPvaa--------YqVSGEYaMIkaAa~~G~iD~~~~vlEsL 400 (428)
+|++-+.+=++ -||+.|-+.=+.-..|.|+.+.+. .+||++ -+.-|-|-..- +. |.-+-++|-.
T Consensus 113 ~a~~na~rl~~eaGa~aVklEdg~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ggf~v~g----rt--~~a~~~i~rA 185 (281)
T 1oy0_A 113 AALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGGFRVQG----RG--DAAEQTIADA 185 (281)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEBSGGGHHHHHHHHHH-TCCEEEEEECCC------------------C--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeEEEECCcHHHHHHHHHHHHC-CCCEEeeecCCcceecccCCeEEEe----Cc--HHHHHHHHHH
Confidence 77777766676 799999999888889999999875 688872 22235453321 00 1114678888
Q ss_pred HHHHHhcccEeeh
Q 014237 401 MCLRRAGADIILT 413 (428)
Q Consensus 401 ~~~kRAGAd~IiT 413 (428)
.++..||||+|+-
T Consensus 186 ~a~~eAGA~~ivl 198 (281)
T 1oy0_A 186 IAVAEAGAFAVVM 198 (281)
T ss_dssp HHHHHHTCSEEEE
T ss_pred HHHHHcCCcEEEE
Confidence 8999999999975
No 69
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=83.89 E-value=5.3 Score=37.17 Aligned_cols=48 Identities=15% Similarity=0.213 Sum_probs=34.7
Q ss_pred CCCCCChHHHHHHHHhchhcCCceEE--e-c----CCCch-HHHHHHHHhhCCCCeEEEE
Q 014237 322 QMNPANYREALVEAQADESEGADILL--V-K----PGLPY-LDVIRLLRDKYPLPIAAYQ 373 (428)
Q Consensus 322 QmdpaN~~EAlrE~~lDi~EGADilM--V-K----Pal~Y-LDII~~vk~~~~lPvaaYq 373 (428)
-+|..|..|+++.+ +.|||.+= | . |.+.| .++|+.+|+.+++|+-+--
T Consensus 9 a~D~~~l~~~i~~~----~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhL 64 (231)
T 3ctl_A 9 CMDLLKFKEQIEFI----DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHL 64 (231)
T ss_dssp GSCGGGHHHHHHHH----HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEE
T ss_pred hCChhhHHHHHHHH----HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEE
Confidence 35778888888776 68999741 2 2 55554 7899999998888876543
No 70
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=83.63 E-value=4.8 Score=39.48 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCc---CcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeec
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDE---AYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVR 234 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~---A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~ 234 (428)
.+.+.++.+.+.|+-+|.|=+-+.+ +| +|.- ..-+-.-...-|++++++-++++|++=.-- +
T Consensus 105 ~v~~~v~~l~~aGaagv~iED~~~~-kr--cGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda--~---------- 169 (305)
T 3ih1_A 105 NVARTAVEMVEAKVAAVQIEDQQLP-KK--CGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDA--R---------- 169 (305)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCSS-CC--TTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECC--H----------
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCC-cc--cCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeecc--c----------
Confidence 4788899999999999999665322 12 2221 111111234457777777677666642211 0
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHH
Q 014237 235 EDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAAL 280 (428)
Q Consensus 235 ~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aL 280 (428)
..+.++.+.+-|..|++||||+|-+-..-+ -.+.+|.+++
T Consensus 170 ------~~~g~~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~ 210 (305)
T 3ih1_A 170 ------GVEGLDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKV 210 (305)
T ss_dssp ------HHHCHHHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS
T ss_pred ------cccCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc
Confidence 012377788889999999999999887776 5666666666
No 71
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=83.62 E-value=4.8 Score=39.11 Aligned_cols=164 Identities=18% Similarity=0.184 Sum_probs=97.5
Q ss_pred CCCCceeechhhhHHHHHHHHHHcCCCeEEEeec-CCCCCCCcccCcCcCCCCCH-----HHHHHHHHHHCCCeEEEeee
Q 014237 146 AMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPK-VPDALKSPTGDEAYNDNGLV-----PRTIWLLKDRYPDLVIYTDV 219 (428)
Q Consensus 146 SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgv-i~~~~KD~~Gs~A~~~~g~v-----~rAIr~iK~~~Pdl~VitDV 219 (428)
.|||+|=... ..-+.+.|++.+.+=+- +.. .+..+.+-+++ ...++.|.+..+ +-|++|.
T Consensus 24 ~~~~a~D~~s-------A~i~e~aGf~ai~vs~s~~a~------~~lG~pD~~~vt~~em~~~~~~I~r~~~-~PviaD~ 89 (287)
T 3b8i_A 24 HTASVFDPMS-------ARIAADLGFECGILGGSVASL------QVLAAPDFALITLSEFVEQATRIGRVAR-LPVIADA 89 (287)
T ss_dssp ECEECCSHHH-------HHHHHHTTCSCEEECHHHHHH------HHHSCCSSSCSCHHHHHHHHHHHHTTCS-SCEEEEC
T ss_pred EEecCCCHHH-------HHHHHHcCCCEEEeCcHHHHH------HhcCCCCCCCCCHHHHHHHHHHHHhcCC-CCEEEEC
Confidence 3778865433 22233479999887332 110 01223332333 345666666553 3478885
Q ss_pred cccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC--------Cc-------hHHHHHHHHHHCC
Q 014237 220 ALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM--------DG-------RVGAIRAALDAEG 284 (428)
Q Consensus 220 cLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMM--------DG-------RV~aIR~aLD~~G 284 (428)
= .|+= |- +...+.+-.+.++||+.|--.|=. +| .+..||.+.+...
T Consensus 90 d---------------~Gyg-~~---~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~ 150 (287)
T 3b8i_A 90 D---------------HGYG-NA---LNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARV 150 (287)
T ss_dssp T---------------TCSS-SH---HHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCC
T ss_pred C---------------CCCC-CH---HHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCC
Confidence 2 2321 22 334455556667999998877653 22 4666666665543
Q ss_pred CCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhh
Q 014237 285 FQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDK 364 (428)
Q Consensus 285 f~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~ 364 (428)
- ++|+=-+.+ |- . -..-+|+|+.+..=.+-|||+|++- +.+-.+.++++.+.
T Consensus 151 ~-----------------~~~~i~aRt-----da---a--~~gl~~ai~Ra~ay~eAGAd~i~~e-~~~~~~~~~~i~~~ 202 (287)
T 3b8i_A 151 D-----------------PALTIIART-----NA---E--LIDVDAVIQRTLAYQEAGADGICLV-GVRDFAHLEAIAEH 202 (287)
T ss_dssp S-----------------TTSEEEEEE-----ET---T--TSCHHHHHHHHHHHHHTTCSEEEEE-CCCSHHHHHHHHTT
T ss_pred C-----------------CCcEEEEec-----hh---h--hcCHHHHHHHHHHHHHcCCCEEEec-CCCCHHHHHHHHHh
Confidence 1 344311100 00 0 0246889999988888899999996 78889999999999
Q ss_pred CCCCeE
Q 014237 365 YPLPIA 370 (428)
Q Consensus 365 ~~lPva 370 (428)
+++|+.
T Consensus 203 ~~~P~i 208 (287)
T 3b8i_A 203 LHIPLM 208 (287)
T ss_dssp CCSCEE
T ss_pred CCCCEE
Confidence 999998
No 72
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=83.60 E-value=6.9 Score=40.58 Aligned_cols=39 Identities=23% Similarity=0.245 Sum_probs=26.1
Q ss_pred HHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 355 LDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 355 LDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
+++|+.+|+.+++||..=.| .+ .|....+..+|||.|+.
T Consensus 332 ~~~i~~lr~~~~~PvivKgv---------------~~-----~e~A~~a~~aGad~I~v 370 (511)
T 1kbi_A 332 WKDIEELKKKTKLPIVIKGV---------------QR-----TEDVIKAAEIGVSGVVL 370 (511)
T ss_dssp HHHHHHHHHHCSSCEEEEEE---------------CS-----HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHhCCcEEEEeC---------------CC-----HHHHHHHHHcCCCEEEE
Confidence 56788899888899886533 22 23344566778887765
No 73
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=83.37 E-value=1.2 Score=44.07 Aligned_cols=44 Identities=25% Similarity=0.338 Sum_probs=34.1
Q ss_pred CCCChHHHHHHHHhchhcCCceEEecCC-------------------------C--------------chHHHHHHHHhh
Q 014237 324 NPANYREALVEAQADESEGADILLVKPG-------------------------L--------------PYLDVIRLLRDK 364 (428)
Q Consensus 324 dpaN~~EAlrE~~lDi~EGADilMVKPa-------------------------l--------------~YLDII~~vk~~ 364 (428)
|-+|-.||+|. ++||||||-.|=. + +=.|.|+++++.
T Consensus 121 ~~~~l~EAlrr----i~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~ 196 (291)
T 3o07_A 121 GAKDLGEALRR----INEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEK 196 (291)
T ss_dssp EESSHHHHHHH----HHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred eCCCHHHHHHH----HHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHc
Confidence 34688999887 4599999999811 2 226899999999
Q ss_pred CCCCeEE
Q 014237 365 YPLPIAA 371 (428)
Q Consensus 365 ~~lPvaa 371 (428)
.++||.+
T Consensus 197 ~~IPVV~ 203 (291)
T 3o07_A 197 GKLPVVN 203 (291)
T ss_dssp TSCSSCE
T ss_pred cCCCEEE
Confidence 8999864
No 74
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=83.26 E-value=0.38 Score=44.92 Aligned_cols=129 Identities=25% Similarity=0.316 Sum_probs=76.0
Q ss_pred HHcCCCeecCCCCCCch-----------HHHHHHHHHHCCCCCceeechhhhhccccccchhhh----------------
Q 014237 256 ARAGADVVSPSDMMDGR-----------VGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREA---------------- 308 (428)
Q Consensus 256 A~AGADiVAPSDMMDGR-----------V~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdA---------------- 308 (428)
+++|||++= =|.|||. |.+||+.- .-+-++=+|-+-. ..|-..|.+|
T Consensus 22 ~~~gad~lH-vDvmDG~fvpn~t~G~~~v~~lr~~~--~~~~dvhLmv~dp---~~~i~~~~~aGAd~itvh~Ea~~~~~ 95 (231)
T 3ctl_A 22 IDSHADYFH-IDIMDGHFVPNLTLSPFFVSQVKKLA--TKPLDCHLMVTRP---QDYIAQLARAGADFITLHPETINGQA 95 (231)
T ss_dssp HHTTCSCEE-EEEECSSSSSCCCBCHHHHHHHHTTC--CSCEEEEEESSCG---GGTHHHHHHHTCSEEEECGGGCTTTH
T ss_pred HHcCCCEEE-EEEEeCccCccchhcHHHHHHHHhcc--CCcEEEEEEecCH---HHHHHHHHHcCCCEEEECcccCCccH
Confidence 389999862 3789997 67777643 1234666666532 1122223222
Q ss_pred ---hcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEE---ecCCC---ch----HHHHHHHHhhC-----CCCeE
Q 014237 309 ---LDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILL---VKPGL---PY----LDVIRLLRDKY-----PLPIA 370 (428)
Q Consensus 309 ---a~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilM---VKPal---~Y----LDII~~vk~~~-----~lPva 370 (428)
+...-..|=+-.--++|...-|.+++ +.+++|+|+ |-|+. .| ||-|+++|+.. ++|+
T Consensus 96 ~~~i~~i~~~G~k~gv~lnp~tp~~~~~~----~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I- 170 (231)
T 3ctl_A 96 FRLIDEIRRHDMKVGLILNPETPVEAMKY----YIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEI- 170 (231)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCCGGGGTT----TGGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEE-
T ss_pred HHHHHHHHHcCCeEEEEEECCCcHHHHHH----HHhcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceE-
Confidence 11111123333444678777665544 446899998 88842 23 78888888764 4564
Q ss_pred EEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehh
Q 014237 371 AYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 371 aYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTY 414 (428)
+| -|-|+.+ +...+..||||+++.-
T Consensus 171 --~V------------dGGI~~~-----~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 171 --EV------------DGSCNQA-----TYEKLMAAGADVFIVG 195 (231)
T ss_dssp --EE------------ESCCSTT-----THHHHHHHTCCEEEEC
T ss_pred --EE------------ECCcCHH-----HHHHHHHcCCCEEEEc
Confidence 33 4556654 4456788999998754
No 75
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=83.07 E-value=2.7 Score=40.93 Aligned_cols=134 Identities=21% Similarity=0.278 Sum_probs=87.3
Q ss_pred HHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeec-----hhhhhccccccchhhhhcCCCCCCCcc--ccCCC
Q 014237 252 AVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMS-----YTAKYASSFYGPFREALDSNPRFGDKK--TYQMN 324 (428)
Q Consensus 252 Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMS-----YsaKyASafYGPFRdAa~Sap~fgDRk--tYQmd 324 (428)
|....+||.|+|.-.|-. ++ -..|+.++..++ |-++ --+.++..+|-..|=- +|
T Consensus 42 A~l~e~aG~d~ilvGdSl----~~-----~~lG~~dt~~vtldem~~h~~-------aV~r~~~~~~vvaD~pfgsY--- 102 (275)
T 3vav_A 42 AALLDRANVDVQLIGDSL----GN-----VLQGQTTTLPVTLDDIAYHTA-------CVARAQPRALIVADLPFGTY--- 102 (275)
T ss_dssp HHHHHHTTCSEEEECTTH----HH-----HTTCCSSSTTCCHHHHHHHHH-------HHHHTCCSSEEEEECCTTSC---
T ss_pred HHHHHHcCCCEEEECcHH----HH-----HHcCCCCCCccCHHHHHHHHH-------HHHhcCCCCCEEEecCCCCC---
Confidence 444567899999665432 21 346887766554 3222 1233444455434422 46
Q ss_pred CCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEec---------hHHHHHHHHHHCCCCc-hhh
Q 014237 325 PANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVS---------GEYSMIKAGGALKMID-EQR 394 (428)
Q Consensus 325 paN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVS---------GEYaMIkaAa~~G~iD-~~~ 394 (428)
.|..++++-+.+=+++||+.|-+.=+..-.|.|+.+.+ -.+|++. |+- |-|-. .|=-| .-+
T Consensus 103 -~s~~~a~~~a~rl~kaGa~aVklEdg~~~~~~i~~l~~-~GIpv~g-HlgltPq~~~~~gg~~v------qgrt~~~a~ 173 (275)
T 3vav_A 103 -GTPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVE-RAVPVCA-HVGLTPQSVHAFGGFKV------QGKTEAGAA 173 (275)
T ss_dssp -SSHHHHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHH-TTCCEEE-EEESCGGGHHHHC---C------CCCSHHHHH
T ss_pred -CCHHHHHHHHHHHHHcCCCEEEECCchhHHHHHHHHHH-CCCCEEE-ecCCCceEEeccCCeEE------EcCCHHHHH
Confidence 47788888887777899999999999888999999987 5899987 432 33321 11111 125
Q ss_pred HHHHHHHHHHHhcccEeeh
Q 014237 395 VMMESLMCLRRAGADIILT 413 (428)
Q Consensus 395 ~vlEsL~~~kRAGAd~IiT 413 (428)
-++|-..++..||||+|+-
T Consensus 174 ~~i~rA~a~~eAGA~~ivl 192 (275)
T 3vav_A 174 QLLRDARAVEEAGAQLIVL 192 (275)
T ss_dssp HHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEe
Confidence 6788899999999999974
No 76
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=82.88 E-value=11 Score=36.71 Aligned_cols=165 Identities=18% Similarity=0.216 Sum_probs=97.3
Q ss_pred CCC-ceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCC
Q 014237 147 MPG-CYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYS 225 (428)
Q Consensus 147 MPG-v~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YT 225 (428)
||- =| -+.. .+++.+.++.+.|..+|-|=|- . .....|+.|.++ .+=|+.-+-|-|-+
T Consensus 97 ~pfgsY-~s~~-~a~~~a~rl~kaGa~aVklEdg----------~-------~~~~~i~~l~~~--GIpv~gHlgltPq~ 155 (275)
T 3vav_A 97 LPFGTY-GTPA-DAFASAVKLMRAGAQMVKFEGG----------E-------WLAETVRFLVER--AVPVCAHVGLTPQS 155 (275)
T ss_dssp CCTTSC-SSHH-HHHHHHHHHHHTTCSEEEEECC----------G-------GGHHHHHHHHHT--TCCEEEEEESCGGG
T ss_pred cCCCCC-CCHH-HHHHHHHHHHHcCCCEEEECCc----------h-------hHHHHHHHHHHC--CCCEEEecCCCceE
Confidence 552 35 4553 4666666666667766665221 0 234566666654 22333333333332
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechh-hhhccccccc
Q 014237 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYT-AKYASSFYGP 304 (428)
Q Consensus 226 shGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYs-aKyASafYGP 304 (428)
.|--.|.. --| ..|+..+.+.+.|..+++||||+|=+-.+-+--...|.++| +++++.-- ..+++.=.=-
T Consensus 156 ~~~~gg~~-vqg--rt~~~a~~~i~rA~a~~eAGA~~ivlE~vp~~~a~~It~~l------~iP~igIGaG~~cdgQvLv 226 (275)
T 3vav_A 156 VHAFGGFK-VQG--KTEAGAAQLLRDARAVEEAGAQLIVLEAVPTLVAAEVTREL------SIPTIGIGAGAECSGQVLV 226 (275)
T ss_dssp HHHHC----CCC--CSHHHHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHHHC------SSCEEEESSCSCSSEEEEC
T ss_pred EeccCCeE-EEc--CCHHHHHHHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHhC------CCCEEEEccCCCCCceeee
Confidence 22111111 113 35777899999999999999999988887765666676665 35555543 3455544444
Q ss_pred hhhhhcC----CCCCCCccccCCCCCChHHHHHHHHhchhcCC
Q 014237 305 FREALDS----NPRFGDKKTYQMNPANYREALVEAQADESEGA 343 (428)
Q Consensus 305 FRdAa~S----ap~fgDRktYQmdpaN~~EAlrE~~lDi~EGA 343 (428)
+-|.++- .|+|- |.|----....+|+++-..|+++|.
T Consensus 227 ~~D~lG~~~~~~pkf~--k~y~~~~~~~~~a~~~y~~~V~~~~ 267 (275)
T 3vav_A 227 LHDMLGVFPGKRPRFV--KDFMQGQPSIFAAVEAYVRAVKDGS 267 (275)
T ss_dssp HHHHTTCSCSCCCTTC--CCCCTTCSSHHHHHHHHHHHHHHTC
T ss_pred HhhhcCCCCCCCCCcc--hhhhhhHHHHHHHHHHHHHHHhcCC
Confidence 5677764 45663 4564333456899999889998875
No 77
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=82.77 E-value=5.1 Score=36.04 Aligned_cols=86 Identities=12% Similarity=0.137 Sum_probs=59.8
Q ss_pred CCCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhhC-CCCeEE-EE--echHHHHHHHHHHCCC---
Q 014237 322 QMNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDKY-PLPIAA-YQ--VSGEYSMIKAGGALKM--- 389 (428)
Q Consensus 322 QmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~~-~lPvaa-Yq--VSGEYaMIkaAa~~G~--- 389 (428)
-+|..|.+++++.+.. ++.|+|++=+ +++. +++|+.+|+.+ +.|++. ++ ..|++ .++.++++|.
T Consensus 12 alD~~~~~~~~~~~~~-~~~~vd~ie~--g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~-~~~~~~~aGad~i 87 (218)
T 3jr2_A 12 ALDQTNLTDAVAVASN-VASYVDVIEV--GTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAI-LSRMAFEAGADWI 87 (218)
T ss_dssp EECCSSHHHHHHHHHH-HGGGCSEEEE--CHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHH-HHHHHHHHTCSEE
T ss_pred EeCCCCHHHHHHHHHH-hcCCceEEEe--CcHHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHH-HHHHHHhcCCCEE
Confidence 3588899999998887 7789998633 3322 79999999985 677763 22 24565 5577777773
Q ss_pred ----CchhhHHHHHHHHHHHhcccEe
Q 014237 390 ----IDEQRVMMESLMCLRRAGADII 411 (428)
Q Consensus 390 ----iD~~~~vlEsL~~~kRAGAd~I 411 (428)
...++.+-|.+..+++.|.+.+
T Consensus 88 ~vh~~~~~~~~~~~~~~~~~~g~~~~ 113 (218)
T 3jr2_A 88 TVSAAAHIATIAACKKVADELNGEIQ 113 (218)
T ss_dssp EEETTSCHHHHHHHHHHHHHHTCEEE
T ss_pred EEecCCCHHHHHHHHHHHHHhCCccc
Confidence 1123455677778888888775
No 78
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=82.72 E-value=5.9 Score=30.57 Aligned_cols=62 Identities=23% Similarity=0.271 Sum_probs=44.6
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... +...|+|++= |++.=+++++.+|+..++|+....-.++......|.+.|..|
T Consensus 34 ~~~~al~~~~---~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~~~~~~~~~~~ga~~ 98 (120)
T 3f6p_A 34 DGNEAVEMVE---ELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADD 98 (120)
T ss_dssp SHHHHHHHHH---TTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSCHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHh---hCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCChHHHHHHHhCCcce
Confidence 6667776654 3468999987 555568899999998899999887766666555556665543
No 79
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=82.48 E-value=11 Score=35.31 Aligned_cols=29 Identities=17% Similarity=0.167 Sum_probs=23.4
Q ss_pred HHHCCCCch---hhHHHHHHHHHHHhcccEee
Q 014237 384 GGALKMIDE---QRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 384 Aa~~G~iD~---~~~vlEsL~~~kRAGAd~Ii 412 (428)
..+.|+++. ++.+.|.+..+++.|+|.||
T Consensus 150 ~ie~g~~~~~~~~~~l~~~~~~l~~~~~d~iV 181 (267)
T 2gzm_A 150 LVESGNFESEMAYEVVRETLQPLKNTDIDTLI 181 (267)
T ss_dssp HHHTTCSSSHHHHHHHHHHHHHHHHSCCSEEE
T ss_pred HHhCCCCCCHHHHHHHHHHHHHHHhcCCCEEE
Confidence 367898873 46778888899999999998
No 80
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=82.37 E-value=1.4 Score=39.65 Aligned_cols=44 Identities=14% Similarity=0.284 Sum_probs=30.6
Q ss_pred HHHHHHHhchh-c--CCceEEec-CCCchHHHHHHHHhhCCCCeEEEE
Q 014237 330 EALVEAQADES-E--GADILLVK-PGLPYLDVIRLLRDKYPLPIAAYQ 373 (428)
Q Consensus 330 EAlrE~~lDi~-E--GADilMVK-Pal~YLDII~~vk~~~~lPvaaYq 373 (428)
+.+.++...+. . |||.|+.= =.++.++++..+.+.+++||.-=+
T Consensus 156 ~~~~~~~~~l~~~~~gadaIvLgCT~l~~~~~~~~l~~~~g~PVids~ 203 (223)
T 2dgd_A 156 FTIYRLVKRHLNEVLKADAVYIACTALSTYEAVQYLHEDLDMPVVSEN 203 (223)
T ss_dssp HHHHHHHHTTHHHHTTSSEEEECCTTSCCTTHHHHHHHHHTSCEEEHH
T ss_pred HHHHHHHHHHhcccCCCCEEEEeCCcccHHHHHHHHHHHhCCCEEEhH
Confidence 44555554443 4 99988775 356777899999888899976433
No 81
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=81.59 E-value=3.5 Score=43.37 Aligned_cols=165 Identities=13% Similarity=0.147 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHcCCCeecCCC-CCCchHHHHHHHHHHCCCCCce------eechhhhhccccccchhhh---hcCC
Q 014237 243 ETVHQLCKQAVSQARAGADVVSPSD-MMDGRVGAIRAALDAEGFQHVS------IMSYTAKYASSFYGPFREA---LDSN 312 (428)
Q Consensus 243 ~Tl~~Lak~Als~A~AGADiVAPSD-MMDGRV~aIR~aLD~~Gf~~v~------IMSYsaKyASafYGPFRdA---a~Sa 312 (428)
.|-+.+++.+..+.++|+.+|.=.. ----.|.+|+++|+..--.... +.|+ +-.-.+.||+-. ++-+
T Consensus 249 ~~p~~~a~~~~~~~~~G~~iiGGCCGTtP~hI~aia~~~~~~~p~~~~~~~~~~~~s~---~~~~~~~~~~iiGer~N~T 325 (566)
T 1q7z_A 249 LKPHDFAVHIDSYYELGVNIFGGCCGTTPEHVKLFRKVLGNRKPLQRKKKRIFAVSSP---SKLVTFDHFVVIGERINPA 325 (566)
T ss_dssp CCHHHHHTTHHHHHHTTCSEECCCTTCCHHHHHHHHHHHCSCCCCCCCCCCCCEEECS---SCEEESSSCEEEEEEECCT
T ss_pred CCHHHHHHHHHHHHHcCCcEEccccCCCHHHHHHHHHHhcCCCCCCcccCccceecCC---ceeeccccceEEEEEecCC
Confidence 3456789999999999999996322 2224799999999644321111 1222 111222555422 2222
Q ss_pred -C-CCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchH-------HHHHHHHhhCCCCeEEEEechHHHHHHH
Q 014237 313 -P-RFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYL-------DVIRLLRDKYPLPIAAYQVSGEYSMIKA 383 (428)
Q Consensus 313 -p-~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YL-------DII~~vk~~~~lPvaaYqVSGEYaMIka 383 (428)
| +|.|--.| .+.++|+..+..-+++|||||=|-|+.... -++..+++.+++|+..= |=....+++
T Consensus 326 g~dsf~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIgpg~~~v~~~ee~~rvv~~i~~~~~vpisID--T~~~~v~ea 399 (566)
T 1q7z_A 326 GRKKLWAEMQK----GNEEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLD--IQNVDLTER 399 (566)
T ss_dssp TCHHHHHHHHT----TCCHHHHHHHHHHHHTTCSEEEEECSSGGGSCHHHHHHHHHHHHHHTCSCEEEE--CCCHHHHHH
T ss_pred CChhHHHHhhc----CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHhhCCceEEEe--CCCHHHHHH
Confidence 2 13221111 367899999999999999999999998643 35556677789998764 335667777
Q ss_pred HHHC--C--CCch---h-hHHHHHHHHHHHhcccEeehhcH
Q 014237 384 GGAL--K--MIDE---Q-RVMMESLMCLRRAGADIILTYFA 416 (428)
Q Consensus 384 Aa~~--G--~iD~---~-~~vlEsL~~~kRAGAd~IiTYfA 416 (428)
|.+. | +|+. + .-+-|.+.-.++.||-+|+..+-
T Consensus 400 al~~~~G~~iINdis~~~~~~~~~~~~~~~~g~~vV~m~~~ 440 (566)
T 1q7z_A 400 ALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMG 440 (566)
T ss_dssp HHHHCSSCCEEEEEESCHHHHHHHHHHHHHHCCEEEEESCS
T ss_pred HHHhcCCCCEEEECCcchhhHHHHHHHHHHhCCeEEEEeCC
Confidence 7776 4 3331 2 22234555678889999986653
No 82
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=81.31 E-value=3.4 Score=40.89 Aligned_cols=98 Identities=21% Similarity=0.330 Sum_probs=66.3
Q ss_pred hcCCCC-CCCccccCCCCCChHHHHHHHHhchhcCCceEEe-----cCCCc--------------hHHHHHHHHhhCCCC
Q 014237 309 LDSNPR-FGDKKTYQMNPANYREALVEAQADESEGADILLV-----KPGLP--------------YLDVIRLLRDKYPLP 368 (428)
Q Consensus 309 a~Sap~-fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMV-----KPal~--------------YLDII~~vk~~~~lP 368 (428)
++-+|. |-| .| .+.++|+..+..=++||||||=| .|+-. -+-+|+.+++.+++|
T Consensus 34 lNvTpDSFsd--~~----~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vp 107 (314)
T 3tr9_A 34 INVSPNSFYH--PH----LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQL 107 (314)
T ss_dssp EECSTTCSBC--BC----CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSE
T ss_pred EeCCCCchhh--cc----CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCe
Confidence 455664 666 23 37899999999999999999987 46655 345788888888999
Q ss_pred eEEEEechHHHHHHHHHHCCC--Cc---hhhHHHHHHHHHHHhcccEeehhc
Q 014237 369 IAAYQVSGEYSMIKAGGALKM--ID---EQRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 369 vaaYqVSGEYaMIkaAa~~G~--iD---~~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
+..=- =....+++|.++|. |+ ..+ .-|.+.-.++.||-+|+...
T Consensus 108 ISIDT--~~~~Va~aAl~aGa~iINDVsg~~-~~~m~~v~a~~g~~vVlMh~ 156 (314)
T 3tr9_A 108 ISVDT--SRPRVMREAVNTGADMINDQRALQ-LDDALTTVSALKTPVCLMHF 156 (314)
T ss_dssp EEEEC--SCHHHHHHHHHHTCCEEEETTTTC-STTHHHHHHHHTCCEEEECC
T ss_pred EEEeC--CCHHHHHHHHHcCCCEEEECCCCC-chHHHHHHHHhCCeEEEECC
Confidence 87543 23456778777773 21 111 12455566788999988653
No 83
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=81.04 E-value=5.1 Score=38.15 Aligned_cols=86 Identities=17% Similarity=0.212 Sum_probs=55.7
Q ss_pred HHHHHHcCCC-eecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHH
Q 014237 252 AVSQARAGAD-VVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYRE 330 (428)
Q Consensus 252 Als~A~AGAD-iVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~E 330 (428)
+-..+++|+| ++.| |+....+...++++.++|+..+.+|+-+ ...|
T Consensus 112 ~~~~~~aG~dGviv~-Dl~~ee~~~~~~~~~~~gl~~i~liap~--------------------------------s~~e 158 (271)
T 1ujp_A 112 FGLFKQAGATGVILP-DLPPDEDPGLVRLAQEIGLETVFLLAPT--------------------------------STDA 158 (271)
T ss_dssp HHHHHHHTCCEEECT-TCCGGGCHHHHHHHHHHTCEEECEECTT--------------------------------CCHH
T ss_pred HHHHHHcCCCEEEec-CCCHHHHHHHHHHHHHcCCceEEEeCCC--------------------------------CCHH
Confidence 3446788999 8887 7777889999999999998766555443 2333
Q ss_pred HHHHHHhchhcCCceEEecC---------CCchHHHHHHHHhhCCCCeEE
Q 014237 331 ALVEAQADESEGADILLVKP---------GLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 331 AlrE~~lDi~EGADilMVKP---------al~YLDII~~vk~~~~lPvaa 371 (428)
=++++..+ .+|-+.+.--. ...-.+.|+++|+.+++||++
T Consensus 159 ri~~ia~~-~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~v 207 (271)
T 1ujp_A 159 RIATVVRH-ATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAV 207 (271)
T ss_dssp HHHHHHTT-CCSCEEEECC------------CCHHHHHHHHTTCCSCEEE
T ss_pred HHHHHHHh-CCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEE
Confidence 34444333 45655332100 012258899999999999874
No 84
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=80.85 E-value=6.8 Score=36.33 Aligned_cols=51 Identities=12% Similarity=-0.016 Sum_probs=34.0
Q ss_pred HHHHHHHHCCC--eEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeec
Q 014237 202 TIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVS 264 (428)
Q Consensus 202 AIr~iK~~~Pd--l~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVA 264 (428)
..+.|++.+|+ ++-++|....||.. -..++-.+.+.+.+-.+.+.|||.|.
T Consensus 15 v~~~l~~~lP~~~~iy~~D~~~~Pyg~------------~s~~~i~~~~~~~~~~L~~~g~d~iv 67 (255)
T 2jfz_A 15 VLKSLLKARLFDEIIYYGDSARVPYGT------------KDPTTIKQFGLEALDFFKPHEIELLI 67 (255)
T ss_dssp HHHHHHHTTCCSEEEEEECTTTCCCTT------------SCHHHHHHHHHHHHHHHGGGCCSCEE
T ss_pred HHHHHHHHCCCCCEEEEeCCCCCCCCC------------CCHHHHHHHHHHHHHHHHHCCCCEEE
Confidence 46778888995 77778999999832 12344455555555556666777664
No 85
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=80.53 E-value=6.7 Score=37.41 Aligned_cols=66 Identities=21% Similarity=0.033 Sum_probs=50.5
Q ss_pred chHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHH---HHHHHHHHHh-cccEeehhcHHHHHHHHhccC
Q 014237 353 PYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVM---MESLMCLRRA-GADIILTYFALQAARCLCGEK 427 (428)
Q Consensus 353 ~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~v---lEsL~~~kRA-GAd~IiTYfA~e~a~wL~~~~ 427 (428)
+...+++++++ .+++|..+-+.|++ ..|..|.. .+ -+.+..+... |+|+|+|-+-..+.+||+..+
T Consensus 206 ~~~~~v~~~~~-~g~~v~~nTlw~~~-------~~g~~d~~-a~~d~~~~~~~l~~~~Gvd~I~TD~P~~l~~yL~~~~ 275 (278)
T 3i10_A 206 PLPPKIKQLLF-KKSLIWYNTLWGSL-------AGNHDDNL-ALTDPEKSYGYLIEQLGARILQTDQPAYLLDYLRKKG 275 (278)
T ss_dssp SSHHHHHHHHT-TTSEEEEECSSGGG-------BTTCCHHH-HHHCHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT
T ss_pred chHHHHHHHHH-CCCEEEEEeccccc-------ccCccchh-hccChHHHHHHHHhcCCCCEEEeCCHHHHHHHHhhcc
Confidence 34677888774 67999999888885 34665543 33 3567788899 999999999999999998643
No 86
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=80.50 E-value=4.3 Score=37.25 Aligned_cols=67 Identities=24% Similarity=0.284 Sum_probs=47.7
Q ss_pred hhcCCceEEec----CCCchHHHHHHHHhhC--CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEee
Q 014237 339 ESEGADILLVK----PGLPYLDVIRLLRDKY--PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 339 i~EGADilMVK----Pal~YLDII~~vk~~~--~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
.+.|||+|-+- ++.+-++.++.+++.. ++||.+ +|-+...+-++|.| ++|||.|=
T Consensus 142 ~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia---------------~GGI~t~~da~~~l----~aGA~~iG 202 (225)
T 1mzh_A 142 IEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKA---------------SGGIRDLETAISMI----EAGADRIG 202 (225)
T ss_dssp HHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEE---------------ESSCCSHHHHHHHH----HTTCSEEE
T ss_pred HHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEE---------------ECCCCCHHHHHHHH----HhCchHHH
Confidence 56799999443 3445689999999876 689876 34444333334443 59999999
Q ss_pred hhcHHHHHHHHh
Q 014237 413 TYFALQAARCLC 424 (428)
Q Consensus 413 TYfA~e~a~wL~ 424 (428)
|+....+.+-|+
T Consensus 203 ~s~~~~i~~~~~ 214 (225)
T 1mzh_A 203 TSSGISIAEEFL 214 (225)
T ss_dssp ESCHHHHHHHHH
T ss_pred HccHHHHHHHHH
Confidence 999988887664
No 87
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=80.22 E-value=6.1 Score=36.26 Aligned_cols=71 Identities=18% Similarity=0.153 Sum_probs=49.5
Q ss_pred CCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCch--hhHHHHHHH
Q 014237 324 NPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDE--QRVMMESLM 401 (428)
Q Consensus 324 dpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~--~~~vlEsL~ 401 (428)
++.+..|+.+.+ .+.|||+|-+.|. .=++.++++++..++|+.+- |-++. .+-++|.+.
T Consensus 164 ~~~~~~~~a~~a---~~~Gad~i~~~~~-~~~~~l~~i~~~~~ipvva~---------------GGi~~~~~~~~~~~~~ 224 (273)
T 2qjg_A 164 DPELVAHAARLG---AELGADIVKTSYT-GDIDSFRDVVKGCPAPVVVA---------------GGPKTNTDEEFLQMIK 224 (273)
T ss_dssp CHHHHHHHHHHH---HHTTCSEEEECCC-SSHHHHHHHHHHCSSCEEEE---------------CCSCCSSHHHHHHHHH
T ss_pred CHhHHHHHHHHH---HHcCCCEEEECCC-CCHHHHHHHHHhCCCCEEEE---------------eCCCCCCHHHHHHHHH
Confidence 333344443333 4689999999975 34789999999999999872 33442 345677777
Q ss_pred HHHHhcccEeeh
Q 014237 402 CLRRAGADIILT 413 (428)
Q Consensus 402 ~~kRAGAd~IiT 413 (428)
.+.++||+.|..
T Consensus 225 ~~~~~Ga~gv~v 236 (273)
T 2qjg_A 225 DAMEAGAAGVAV 236 (273)
T ss_dssp HHHHHTCSEEEC
T ss_pred HHHHcCCcEEEe
Confidence 778899998753
No 88
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=79.90 E-value=13 Score=36.19 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=69.9
Q ss_pred eeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCC-cccCcCcCCCCCHHHHHHHHHHHC--CCeEEEeeecccCCCCC
Q 014237 151 YRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKS-PTGDEAYNDNGLVPRTIWLLKDRY--PDLVIYTDVALDPYSSD 227 (428)
Q Consensus 151 ~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD-~~Gs~A~~~~g~v~rAIr~iK~~~--Pdl~VitDVcLc~YTsh 227 (428)
|--+.. .+.+.++++.+.|+-.|-|=+-+.. +|- -.|....-|..-...-|++++++. +++.|++
T Consensus 89 yg~~~~-~~~~~v~~l~~aGa~gv~iEd~~~~-k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~a---------- 156 (295)
T 1xg4_A 89 FGSSAF-NVARTVKSMIKAGAAGLHIEDQVGA-KRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMA---------- 156 (295)
T ss_dssp SSSSHH-HHHHHHHHHHHHTCSEEEEECBCSS-CCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEE----------
T ss_pred cCCCHH-HHHHHHHHHHHcCCeEEEECCCCCC-cccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEE----------
Confidence 443454 4889999999999999998554211 111 111122333334445667777664 4444443
Q ss_pred CcceeecCCCcccc--HHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHH
Q 014237 228 GHDGIVREDGVIMN--DETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALD 281 (428)
Q Consensus 228 GHcGil~~~g~IdN--D~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD 281 (428)
+.|. ...++.+.+-|..|++||||+|-+-.+-| -.+..|.++|+
T Consensus 157 ----------Rtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~ 203 (295)
T 1xg4_A 157 ----------RTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ 203 (295)
T ss_dssp ----------EECCHHHHCHHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC
T ss_pred ----------ecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC
Confidence 2221 23467888899999999999998888876 67888888884
No 89
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=79.66 E-value=2.7 Score=41.57 Aligned_cols=97 Identities=23% Similarity=0.248 Sum_probs=59.0
Q ss_pred hcCCC-CCCCccccCCCCCChHHHHHHHHhchhcCCceEEec-----CCCch----------HHHHHHHHhhC-CCCeEE
Q 014237 309 LDSNP-RFGDKKTYQMNPANYREALVEAQADESEGADILLVK-----PGLPY----------LDVIRLLRDKY-PLPIAA 371 (428)
Q Consensus 309 a~Sap-~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-----Pal~Y----------LDII~~vk~~~-~lPvaa 371 (428)
++-+| +|-|-..|+ +.++|+..+..=++||||||=|= |+ .. +-+|+.+++.+ ++|+..
T Consensus 48 lNvTPDSFsdgg~~~----~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG-~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI 122 (318)
T 2vp8_A 48 VNRTPDSFYDKGATF----SDAAARDAVHRAVADGADVIDVGGVKAGPG-ERVDVDTEITRLVPFIEWLRGAYPDQLISV 122 (318)
T ss_dssp EC------------------CHHHHHHHHHHHHTTCSEEEEC-----------CHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred EeCCCCcccCCCccC----CHHHHHHHHHHHHHCCCCEEEECCCcCCCC-CCCCHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 34456 466665564 67899999999999999999886 77 44 56688888888 899865
Q ss_pred EEechHHHHHHHHHHCC--CCc-----hhhHHHHHHHHHHHhcccEeehhc
Q 014237 372 YQVSGEYSMIKAGGALK--MID-----EQRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 372 YqVSGEYaMIkaAa~~G--~iD-----~~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
=|=....+++|.++| +|+ .+. |.+.-.++.|+-+|+...
T Consensus 123 --DT~~~~VaeaAl~aGa~iINDVsg~~d~---~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 123 --DTWRAQVAKAACAAGADLINDTWGGVDP---AMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp --ECSCHHHHHHHHHHTCCEEEETTSSSST---THHHHHHHHTCEEEEECC
T ss_pred --eCCCHHHHHHHHHhCCCEEEECCCCCch---HHHHHHHHhCCCEEEECC
Confidence 244556778888776 332 122 334456788999999665
No 90
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=79.38 E-value=5.6 Score=37.80 Aligned_cols=29 Identities=14% Similarity=0.138 Sum_probs=22.5
Q ss_pred HHHCCCCch----hhHHHHHHHHHHHhcccEee
Q 014237 384 GGALKMIDE----QRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 384 Aa~~G~iD~----~~~vlEsL~~~kRAGAd~Ii 412 (428)
..+.|+++. ++.+.|.+..++..|+|.||
T Consensus 169 ~ie~g~~~~~~~~~~~l~~~~~~l~~~g~D~IV 201 (286)
T 2jfq_A 169 LVEQMRYSDPTITSIVIHQTLKRWRNSESDTVI 201 (286)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHGGGTTCSCSEEE
T ss_pred HHHcCCCCCchhHHHHHHHHHHHHHhCCCCEEE
Confidence 456888874 45578888888888999998
No 91
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=79.38 E-value=13 Score=34.99 Aligned_cols=29 Identities=14% Similarity=0.107 Sum_probs=23.5
Q ss_pred HHHCCCCch---hhHHHHHHHHHHHhcccEee
Q 014237 384 GGALKMIDE---QRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 384 Aa~~G~iD~---~~~vlEsL~~~kRAGAd~Ii 412 (428)
..+.|+++. ++.+.|.+..++..|+|.||
T Consensus 151 ~ve~g~~~~~~~~~~l~~~l~~l~~~~~D~iV 182 (272)
T 1zuw_A 151 FVESGKFLDQTADEIVKTSLYPLKDTSIDSLI 182 (272)
T ss_dssp HHTSCCCCHHHHHHHHHHHHHHHHHSCCSEEE
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHhcCCCEEE
Confidence 456899873 46788888899999999988
No 92
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=79.16 E-value=6 Score=38.55 Aligned_cols=101 Identities=22% Similarity=0.306 Sum_probs=67.6
Q ss_pred hcCCC-CCCCccccCCCCCChHHHHHHHHhchhcCCceEEec-----CCCc----------hHHHHHHHHhhCCCCeEEE
Q 014237 309 LDSNP-RFGDKKTYQMNPANYREALVEAQADESEGADILLVK-----PGLP----------YLDVIRLLRDKYPLPIAAY 372 (428)
Q Consensus 309 a~Sap-~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-----Pal~----------YLDII~~vk~~~~lPvaaY 372 (428)
++-+| +|-|-..|+ +.++|+..+..=+++|||||=|= |+.. ++.+|+.+++.+++|+..=
T Consensus 46 lNvTPDSFsdgg~~~----~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSID 121 (297)
T 1tx2_A 46 LNVTPDSFSDGGSYN----EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISID 121 (297)
T ss_dssp CCCCCCTTCSSCBHH----HHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEE
T ss_pred EeCCCCccccCCccC----CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEe
Confidence 45566 466655453 67899999999999999999887 5533 5888899999899998764
Q ss_pred EechHHHHHHHHHHCCC--Cch---hhHHHHHHHHHHHhcccEeehhc
Q 014237 373 QVSGEYSMIKAGGALKM--IDE---QRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 373 qVSGEYaMIkaAa~~G~--iD~---~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
-- .-..+++|.++|. |+. ....-|.+.-.++.|+-+|+...
T Consensus 122 T~--~~~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 122 TY--KAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp CS--CHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECC
T ss_pred CC--CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeC
Confidence 33 4456667666652 211 00011334556788999998774
No 93
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=79.14 E-value=12 Score=36.49 Aligned_cols=96 Identities=17% Similarity=0.238 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecC---------C--CCCCCcccCcCcCCCCCHHHHHHHHHHHCC-CeEEEeeecccCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKV---------P--DALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYS 225 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi---------~--~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P-dl~VitDVcLc~YT 225 (428)
...+.++.+.+.|...|-|-+-= | +...|+.|-.--|.--++...|++++++++ |..|...+..+.|.
T Consensus 153 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~ 232 (349)
T 3hgj_A 153 AFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWG 232 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCS
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccccc
Confidence 35666677889999999997632 2 233566664333333356678899999986 77788888877663
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 014237 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (428)
Q Consensus 226 shGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSD 267 (428)
.. | .+-+++ .+.|-.+.++|+|.|--|.
T Consensus 233 ~~---------g-~~~~~~----~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 233 EG---------G-WSLEDT----LAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp TT---------S-CCHHHH----HHHHHHHHHTTCCEEEEEC
T ss_pred CC---------C-CCHHHH----HHHHHHHHHcCCCEEEEec
Confidence 21 2 222333 4455566789999998763
No 94
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=78.77 E-value=3.8 Score=40.75 Aligned_cols=181 Identities=15% Similarity=0.151 Sum_probs=106.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecC---------C--CCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKV---------P--DALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSS 226 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi---------~--~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTs 226 (428)
...+.++.+.+.|...|-|-+-= | +...|+.|-.--|.--++.+.|+++|+++++--|..-+....+
T Consensus 162 ~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~-- 239 (361)
T 3gka_A 162 AFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGD-- 239 (361)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCC--
T ss_pred HHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccc--
Confidence 35666777889999999996531 2 2446776654444555777899999999863255555544332
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchh
Q 014237 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFR 306 (428)
Q Consensus 227 hGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFR 306 (428)
..|+-. ..+++...+.|-...++|+|.|.-|.-+.|. .|..-+|
T Consensus 240 --~~g~~~-------~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~---------------------------~~~~~ik 283 (361)
T 3gka_A 240 --AHTMGD-------SDPAATFGHVARELGRRRIAFLFARESFGGD---------------------------AIGQQLK 283 (361)
T ss_dssp --SSSCCC-------SCHHHHHHHHHHHHHHTTCSEEEEECCCSTT---------------------------CCHHHHH
T ss_pred --cCCCCC-------CCcHHHHHHHHHHHHHcCCCEEEECCCCCCH---------------------------HHHHHHH
Confidence 112211 1223444455556678999999766533110 2334455
Q ss_pred hhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcC-CceEEe-cCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHH
Q 014237 307 EALDSNPRFGDKKTYQMNPANYREALVEAQADESEG-ADILLV-KPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAG 384 (428)
Q Consensus 307 dAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EG-ADilMV-KPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaA 384 (428)
++++ -|-.+.-. + +| ++ ++.-+++| ||+||+ .|.+.-=|+.+++++. .|+..|.-+.=|.=
T Consensus 284 ~~~~-iPvi~~Gg-i--t~---e~----a~~~l~~G~aD~V~iGR~~ladPdl~~k~~~g--~~l~~~~~~~~y~~---- 346 (361)
T 3gka_A 284 AAFG-GPFIVNEN-F--TL---DS----AQAALDAGQADAVAWGKLFIANPDLPRRFKLN--APLNEPNAATFYAQ---- 346 (361)
T ss_dssp HHHC-SCEEEESS-C--CH---HH----HHHHHHTTSCSEEEESHHHHHCTTHHHHHHHT--CCCCCCCGGGSSCS----
T ss_pred HHcC-CCEEEeCC-C--CH---HH----HHHHHHcCCccEEEECHHhHhCcHHHHHHHhC--CCCCCCccccccCC----
Confidence 5553 34332111 1 32 22 22334566 999987 4555556899999884 66677776665532
Q ss_pred HHCCCCchh
Q 014237 385 GALKMIDEQ 393 (428)
Q Consensus 385 a~~G~iD~~ 393 (428)
...|++|..
T Consensus 347 ~~~gy~dyp 355 (361)
T 3gka_A 347 GEVGYTDYP 355 (361)
T ss_dssp SSTTTTCSC
T ss_pred CCCCcccCh
Confidence 347888854
No 95
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=78.49 E-value=8.1 Score=37.21 Aligned_cols=56 Identities=23% Similarity=0.289 Sum_probs=37.8
Q ss_pred cCCceEEecCCC--------------chHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHh
Q 014237 341 EGADILLVKPGL--------------PYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRA 406 (428)
Q Consensus 341 EGADilMVKPal--------------~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRA 406 (428)
-|||+|-+..+. ..+|+|+.+++.+++||..=-+ | .| ++ .|....+..+
T Consensus 139 ~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~-~----------~~-~~-----~~~a~~a~~~ 201 (349)
T 1p0k_A 139 IGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEV-G----------FG-MS-----KASAGKLYEA 201 (349)
T ss_dssp TTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEE-S----------SC-CC-----HHHHHHHHHH
T ss_pred cCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEec-C----------CC-CC-----HHHHHHHHHc
Confidence 489988665432 1579999999999999986432 1 11 23 2334566788
Q ss_pred cccEeeh
Q 014237 407 GADIILT 413 (428)
Q Consensus 407 GAd~IiT 413 (428)
|||.|+.
T Consensus 202 Gad~I~v 208 (349)
T 1p0k_A 202 GAAAVDI 208 (349)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9998876
No 96
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=78.45 E-value=16 Score=35.47 Aligned_cols=121 Identities=12% Similarity=0.096 Sum_probs=72.5
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCC-ccc--CcCcCCCCCHHHHHHHHHHHC--CCeEEEeeecc
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKS-PTG--DEAYNDNGLVPRTIWLLKDRY--PDLVIYTDVAL 221 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD-~~G--s~A~~~~g~v~rAIr~iK~~~--Pdl~VitDVcL 221 (428)
||.=|- +.. .+.+.++++.+.|+-+|.|=+-+.. +|- -.| ....-|-.-...-|++++++. ++..|++=.
T Consensus 82 ~d~Gyg-~~~-~~~~~v~~l~~aGa~gv~iED~~~~-k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRt-- 156 (290)
T 2hjp_A 82 IDTGFG-NAV-NVHYVVPQYEAAGASAIVMEDKTFP-KDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARV-- 156 (290)
T ss_dssp CTTTTS-SHH-HHHHHHHHHHHHTCSEEEEECBCSS-CCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEE--
T ss_pred CCCCCC-CHH-HHHHHHHHHHHhCCeEEEEcCCCCC-ccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEee--
Confidence 333355 554 5899999999999999999554311 111 011 111222222234566666663 667776532
Q ss_pred cCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC-CCC-chHHHHHHHHHHCCCCCceee
Q 014237 222 DPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD-MMD-GRVGAIRAALDAEGFQHVSIM 291 (428)
Q Consensus 222 c~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSD-MMD-GRV~aIR~aLD~~Gf~~v~IM 291 (428)
+.+- . .. .++.+.+-|..|++||||+|-+-. +-| -.+..|.++|+ + .++++
T Consensus 157 da~~-a-------~~-------g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~--~--~vP~i 209 (290)
T 2hjp_A 157 EALI-A-------GL-------GQQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWP--G--KVPLV 209 (290)
T ss_dssp CTTT-T-------TC-------CHHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCC--C--SSCEE
T ss_pred hHhh-c-------cc-------cHHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcC--C--CCCEE
Confidence 1110 0 11 267788889999999999998777 766 67788888874 1 35555
No 97
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=78.09 E-value=4.9 Score=37.63 Aligned_cols=71 Identities=21% Similarity=0.384 Sum_probs=42.0
Q ss_pred hcCCceEEecCCCch---------------------------HHHHHHHHhh-CCCCeEE--E-E-e--chHHHHHHHHH
Q 014237 340 SEGADILLVKPGLPY---------------------------LDVIRLLRDK-YPLPIAA--Y-Q-V--SGEYSMIKAGG 385 (428)
Q Consensus 340 ~EGADilMVKPal~Y---------------------------LDII~~vk~~-~~lPvaa--Y-q-V--SGEYaMIkaAa 385 (428)
+.|||+|.+ +.|| +++|+++|+. .++|+.. | + | .|.-..++.++
T Consensus 42 ~~GaD~iei--g~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~ 119 (268)
T 1qop_A 42 DAGADALEL--GVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCE 119 (268)
T ss_dssp HTTCSSEEE--ECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHH
T ss_pred HCCCCEEEE--CCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHH
Confidence 468999999 5555 5899999999 6999876 2 2 1 12234445555
Q ss_pred HCCC---Cchh---hHHHHHHHHHHHhcccEee
Q 014237 386 ALKM---IDEQ---RVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 386 ~~G~---iD~~---~~vlEsL~~~kRAGAd~Ii 412 (428)
+.|. +=.+ +-+.+.+..+++.|.+.|.
T Consensus 120 ~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 120 QVGVDSVLVADVPVEESAPFRQAALRHNIAPIF 152 (268)
T ss_dssp HHTCCEEEETTCCGGGCHHHHHHHHHTTCEEEC
T ss_pred HcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEE
Confidence 5443 1110 1134555566666665443
No 98
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=77.68 E-value=45 Score=37.97 Aligned_cols=194 Identities=15% Similarity=0.146 Sum_probs=101.1
Q ss_pred eEEEeeCCCCcccCCCCCceeechhhhHHHHHHHHHHcC--CCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHH
Q 014237 132 PLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVG--VNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDR 209 (428)
Q Consensus 132 PlFV~eg~~~~~I~SMPGv~r~s~~~~l~~~v~~~~~~G--I~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~ 209 (428)
.|.|.|..=+.- ..-+|..|++.+ +.++.++.+.++| +.++=..|- ..-|. ...+-.+++. ..++.+++.
T Consensus 550 ~v~i~DtTLRDG-~Qs~~~~~~~~~-dkl~ia~~L~~~gv~~~~iE~~gg---a~f~~--~~~f~~~~p~-e~l~~~~~~ 621 (1165)
T 2qf7_A 550 RVLLTDTTMRDG-HQSLLATRMRTY-DIARIAGTYSHALPNLLSLECWGG---ATFDV--SMRFLTEDPW-ERLALIREG 621 (1165)
T ss_dssp SCEEEECTTTHH-HHHHHTTCCCHH-HHHHHHHHHHHHCTTCSEEEEEET---THHHH--HHHHHCCCHH-HHHHHHHHH
T ss_pred ceEEEecccccc-cccCCcccCCHH-HHHHHHHHHHHhCCCceEEEeCCC---CccHH--HHhhcCCCHH-HHHHHHHHH
Confidence 467777541111 124556677786 5899999999995 555665321 00000 0000011222 478888999
Q ss_pred CCCeEEEe--e-ecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeec----CCCCCCchHHHHHHHHHH
Q 014237 210 YPDLVIYT--D-VALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVS----PSDMMDGRVGAIRAALDA 282 (428)
Q Consensus 210 ~Pdl~Vit--D-VcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVA----PSDMMDGRV~aIR~aLD~ 282 (428)
.|+..+.+ - ..++-||.. .+ ..++.-.+.|+ ++|+|+|. .|+ ++ .+....+...+
T Consensus 622 ~~~~~~~~l~R~~n~vg~~~~-----------~~--~~~~~~i~~a~---~~g~d~irif~sl~~-~~-~~~~~i~~~~~ 683 (1165)
T 2qf7_A 622 APNLLLQMLLRGANGVGYTNY-----------PD--NVVKYFVRQAA---KGGIDLFRVFDCLNW-VE-NMRVSMDAIAE 683 (1165)
T ss_dssp CTTSEEEEEEETTTBTCSSCC-----------CH--HHHHHHHHHHH---HHTCCEEEEECTTCC-GG-GGHHHHHHHHH
T ss_pred chhhHHHHHhccccccccccC-----------Cc--hhHHHHHHHHH---hcCcCEEEEEeeHHH-HH-HHHHHHHHHHh
Confidence 99854421 1 124455421 11 12222333333 46999853 333 23 33334444445
Q ss_pred CCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEec-------CCCchH
Q 014237 283 EGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVK-------PGLPYL 355 (428)
Q Consensus 283 ~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-------Pal~YL 355 (428)
.|. .| .++.-|...|.-|||... |.+..+.-+..=++-|||.|-+| |. .+-
T Consensus 684 ~g~-~v---~~~i~~~~~~~d~~r~~~-----------------~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~-~~~ 741 (1165)
T 2qf7_A 684 ENK-LC---EAAICYTGDILNSARPKY-----------------DLKYYTNLAVELEKAGAHIIAVKDMAGLLKPA-AAK 741 (1165)
T ss_dssp TTC-EE---EEEEECCSCTTCTTSGGG-----------------CHHHHHHHHHHHHHTTCSEEEEEETTCCCCHH-HHH
T ss_pred ccc-eE---EEEEEEeccccCCCCCCC-----------------CHHHHHHHHHHHHHcCCCEEEEeCccCCcCHH-HHH
Confidence 663 22 222224444555665322 33333333333346799999777 44 246
Q ss_pred HHHHHHHhhCCCCeEEEEe
Q 014237 356 DVIRLLRDKYPLPIAAYQV 374 (428)
Q Consensus 356 DII~~vk~~~~lPvaaYqV 374 (428)
++|+.+|+++++|+. +|-
T Consensus 742 ~lv~~l~~~~~~~i~-~H~ 759 (1165)
T 2qf7_A 742 VLFKALREATGLPIH-FHT 759 (1165)
T ss_dssp HHHHHHHHHCSSCEE-EEE
T ss_pred HHHHHHHHhcCCeEE-EEE
Confidence 899999999999874 454
No 99
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=77.64 E-value=2.6 Score=38.23 Aligned_cols=70 Identities=26% Similarity=0.420 Sum_probs=47.0
Q ss_pred ccCCCCCChHHHHHHHHhchhc---CCceEEe---cCC---C----chHHHHHHHHhhC-CCCeEEEEechHHHHHHHHH
Q 014237 320 TYQMNPANYREALVEAQADESE---GADILLV---KPG---L----PYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGG 385 (428)
Q Consensus 320 tYQmdpaN~~EAlrE~~lDi~E---GADilMV---KPa---l----~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa 385 (428)
..-+.|.+..|.+++. .+ |+|+|.+ .|+ . .-++-|+++|+.. ++|+.+
T Consensus 117 gv~~~p~t~~e~~~~~----~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v-------------- 178 (228)
T 1h1y_A 117 GVSLRPGTPVEEVFPL----VEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEV-------------- 178 (228)
T ss_dssp EEEECTTSCGGGGHHH----HHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEE--------------
T ss_pred EEEEeCCCCHHHHHHH----HhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEE--------------
Confidence 3455777666665543 34 8999988 554 1 2378899999988 788653
Q ss_pred HCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 386 ALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 386 ~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
.|-|+.+ .+..+.++|||+|+.
T Consensus 179 -~GGI~~~-----ni~~~~~aGaD~vvv 200 (228)
T 1h1y_A 179 -DGGLGPS-----TIDVAASAGANCIVA 200 (228)
T ss_dssp -ESSCSTT-----THHHHHHHTCCEEEE
T ss_pred -ECCcCHH-----HHHHHHHcCCCEEEE
Confidence 4567764 334556779999874
No 100
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=77.29 E-value=17 Score=35.74 Aligned_cols=103 Identities=17% Similarity=0.078 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHH---HHHHHHH----CCCeEEEeeecccCCCCCCcc
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRT---IWLLKDR----YPDLVIYTDVALDPYSSDGHD 230 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rA---Ir~iK~~----~Pdl~VitDVcLc~YTshGHc 230 (428)
.+.+.++++.+.|+-.|.|=+.+.+ +| +|.-.-.+==..... |++.+++ -||++|++=+- .+..
T Consensus 104 ~v~~~v~~l~~aGaagv~iEDq~~~-k~--cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTD--a~~~---- 174 (307)
T 3lye_A 104 MVARTVEHYIRSGVAGAHLEDQILT-KR--CGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTD--ALQS---- 174 (307)
T ss_dssp HHHHHHHHHHHTTCCEEEECCBCCC-C----------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC--CHHH----
T ss_pred HHHHHHHHHHHcCCeEEEEcCCCCC-cc--cCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEech--hhhc----
Confidence 4788899999999999998554322 12 221110000122233 3333332 47888886432 1110
Q ss_pred eeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHH
Q 014237 231 GIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALD 281 (428)
Q Consensus 231 Gil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD 281 (428)
..++...+-|..|++||||+|=+-.+-| ..+.+|.++++
T Consensus 175 ------------~gldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~ 214 (307)
T 3lye_A 175 ------------LGYEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAALA 214 (307)
T ss_dssp ------------HCHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT
T ss_pred ------------cCHHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc
Confidence 1255555667899999999998887776 57788888875
No 101
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=76.64 E-value=25 Score=32.98 Aligned_cols=113 Identities=17% Similarity=0.136 Sum_probs=71.6
Q ss_pred HcCCCeecCCCCCC----c-------hHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCC
Q 014237 257 RAGADVVSPSDMMD----G-------RVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNP 325 (428)
Q Consensus 257 ~AGADiVAPSDMMD----G-------RV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdp 325 (428)
+.|||.| ||.. + .+.+++++..+.|.. +.|++|.- |+ .+++- .++
T Consensus 103 ~~Ga~~v---~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~-vIi~~~~~-------G~---------~~~~~----~s~ 158 (263)
T 1w8s_A 103 SLGASAV---GYTIYPGSGFEWKMFEELARIKRDAVKFDLP-LVVESFPR-------GG---------KVVNE----TAP 158 (263)
T ss_dssp HTTCSEE---EEEECTTSTTHHHHHHHHHHHHHHHHHHTCC-EEEEECCC-------ST---------TCCCT----TCH
T ss_pred HCCCCEE---EEEEecCCcCHHHHHHHHHHHHHHHHHcCCe-EEEEeeCC-------CC---------ccccC----CCH
Confidence 6799988 3322 1 346777777777764 77887741 21 22221 122
Q ss_pred CChHHHHHH-HHhchhcCCceEEecCCCchHHHHHHHHhhCCC-CeEEEEechHHHHHHHHHHCCCCc--hhhHHHHHHH
Q 014237 326 ANYREALVE-AQADESEGADILLVKPGLPYLDVIRLLRDKYPL-PIAAYQVSGEYSMIKAGGALKMID--EQRVMMESLM 401 (428)
Q Consensus 326 aN~~EAlrE-~~lDi~EGADilMVKPal~YLDII~~vk~~~~l-PvaaYqVSGEYaMIkaAa~~G~iD--~~~~vlEsL~ 401 (428)
|.+.+ +..=.+.|||+|=+.-. .=++-++++++..++ ||.+ .|-+. ..+-++|.+.
T Consensus 159 ----~~i~~a~~~a~~~GAD~vkt~~~-~~~e~~~~~~~~~~~~pV~a---------------sGGi~~~~~~~~l~~i~ 218 (263)
T 1w8s_A 159 ----EIVAYAARIALELGADAMKIKYT-GDPKTFSWAVKVAGKVPVLM---------------SGGPKTKTEEDFLKQVE 218 (263)
T ss_dssp ----HHHHHHHHHHHHHTCSEEEEECC-SSHHHHHHHHHHTTTSCEEE---------------ECCSCCSSHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHHhCCCCeEEE---------------EeCCCCCCHHHHHHHHH
Confidence 33333 34445689999888731 146889999988876 9765 33444 3467788888
Q ss_pred HHHHhcccEeeh
Q 014237 402 CLRRAGADIILT 413 (428)
Q Consensus 402 ~~kRAGAd~IiT 413 (428)
...+|||+.+..
T Consensus 219 ~~~~aGA~Gvsv 230 (263)
T 1w8s_A 219 GVLEAGALGIAV 230 (263)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHcCCeEEEE
Confidence 888999998763
No 102
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=76.26 E-value=4.1 Score=38.28 Aligned_cols=65 Identities=22% Similarity=0.332 Sum_probs=43.1
Q ss_pred CChHHHHHHHHhchhcCCceEEec-----------------------------CCC---------chHHHHHHHHhhCCC
Q 014237 326 ANYREALVEAQADESEGADILLVK-----------------------------PGL---------PYLDVIRLLRDKYPL 367 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK-----------------------------Pal---------~YLDII~~vk~~~~l 367 (428)
.|..|+++. .+.|||+|.++ |.. +-++.|+++++.+++
T Consensus 133 ~~~~~~~~a----~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~ 208 (297)
T 2zbt_A 133 RNLGEALRR----IAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRL 208 (297)
T ss_dssp SSHHHHHHH----HHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSC
T ss_pred CCHHHHHHH----HHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCC
Confidence 567776653 57899999776 332 236889999998888
Q ss_pred CeEEEEechHHHHHHHHHHCCCC-chhhHHHHHHHHHHHhcccEee
Q 014237 368 PIAAYQVSGEYSMIKAGGALKMI-DEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 368 PvaaYqVSGEYaMIkaAa~~G~i-D~~~~vlEsL~~~kRAGAd~Ii 412 (428)
|+.-. ++ |-| +. |.+..+..+|||.++
T Consensus 209 pvi~~-a~------------GGI~~~-----e~i~~~~~aGadgvv 236 (297)
T 2zbt_A 209 PVVNF-AA------------GGIATP-----ADAALMMHLGMDGVF 236 (297)
T ss_dssp SSCEE-BC------------SSCCSH-----HHHHHHHHTTCSEEE
T ss_pred CcEEE-ee------------CCCCCH-----HHHHHHHHcCCCEEE
Confidence 87521 33 333 32 455566778888765
No 103
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=76.24 E-value=9.9 Score=29.70 Aligned_cols=60 Identities=5% Similarity=-0.035 Sum_probs=42.5
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCC
Q 014237 327 NYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMI 390 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~i 390 (428)
+..||+..+.. +..|+|+ -|.+.-+++++.+++.. .+|+..+--..+-..+..+.+.|..
T Consensus 50 ~~~~al~~l~~---~~~dlvi-~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~ 110 (137)
T 2pln_A 50 SLEDGEYLMDI---RNYDLVM-VSDKNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGAD 110 (137)
T ss_dssp CHHHHHHHHHH---SCCSEEE-ECSTTHHHHHHHHHHHSTTSEEEEEESSCCHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHc---CCCCEEE-EcCccHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHcCCc
Confidence 55666665542 4689999 88888899999999885 6899887665554555555555543
No 104
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=76.12 E-value=31 Score=35.82 Aligned_cols=43 Identities=30% Similarity=0.337 Sum_probs=29.4
Q ss_pred HHHHHHHHhchhcCCceEEe-----cC----------CCchHHHHHHHHhhCCCCeEE
Q 014237 329 REALVEAQADESEGADILLV-----KP----------GLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 329 ~EAlrE~~lDi~EGADilMV-----KP----------al~YLDII~~vk~~~~lPvaa 371 (428)
.|++.-+..=.+.|+|+|-| .| ...+++.++++|+.+++||++
T Consensus 228 ~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~ 285 (671)
T 1ps9_A 228 AETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVT 285 (671)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEE
T ss_pred HHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEE
Confidence 45444333323579999965 22 123589999999999999976
No 105
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=75.83 E-value=6 Score=37.37 Aligned_cols=92 Identities=16% Similarity=0.163 Sum_probs=61.6
Q ss_pred CCChHHHHHHHHhchhcCCceEEecCCC--------chHHHHHHHHhhC-CCCe-EEEEec---hHH---------HHHH
Q 014237 325 PANYREALVEAQADESEGADILLVKPGL--------PYLDVIRLLRDKY-PLPI-AAYQVS---GEY---------SMIK 382 (428)
Q Consensus 325 paN~~EAlrE~~lDi~EGADilMVKPal--------~YLDII~~vk~~~-~lPv-aaYqVS---GEY---------aMIk 382 (428)
..+.+|++.++..=.+.|||+|=..=.. .-.+.++.+++.. ++|+ +.|--. |+| ..++
T Consensus 28 ~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~ 107 (257)
T 2yr1_A 28 GEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIE 107 (257)
T ss_dssp CSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHH
Confidence 3577888888776577899998654321 1234667888887 7995 444322 323 6888
Q ss_pred HHHHCC---CCchhh----HHHHHHHHHHHhcccEeehhcH
Q 014237 383 AGGALK---MIDEQR----VMMESLMCLRRAGADIILTYFA 416 (428)
Q Consensus 383 aAa~~G---~iD~~~----~vlEsL~~~kRAGAd~IiTYfA 416 (428)
.+++.| ++|-+- .+.+.+...++.|..+|++|+-
T Consensus 108 ~~~~~g~~d~iDvEl~~~~~~~~l~~~~~~~~~kvI~S~Hd 148 (257)
T 2yr1_A 108 AICRSGAIDLVDYELAYGERIADVRRMTEECSVWLVVSRHY 148 (257)
T ss_dssp HHHHHTCCSEEEEEGGGTTHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHcCCCCEEEEECCCChhHHHHHHHHHhCCCEEEEEecC
Confidence 999988 666432 3345555567889999999983
No 106
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=74.97 E-value=20 Score=34.29 Aligned_cols=87 Identities=21% Similarity=0.163 Sum_probs=63.6
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCCc-------hHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHC--C--CCc---h
Q 014237 327 NYREALVEAQADESEGADILLVKPGLP-------YLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGAL--K--MID---E 392 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal~-------YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~--G--~iD---~ 392 (428)
+.++|+..+..-+++|||||=|--..+ ...+|+.+++.+++|+..=-- .-..+++|.+. | +|+ .
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT~--~~~v~~aal~a~~Ga~iINdvs~ 109 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDST--NPDAIEAGLKVHRGHAMINSTSA 109 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEECS--CHHHHHHHHHHCCSCCEEEEECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeCC--CHHHHHHHHHhCCCCCEEEECCC
Confidence 568899999999999999999876553 577888999999999977443 45566777766 4 333 1
Q ss_pred h-hHHHHHHHHHHHhcccEeehhc
Q 014237 393 Q-RVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 393 ~-~~vlEsL~~~kRAGAd~IiTYf 415 (428)
. .-+-|.+.-.++.|+.+|+..+
T Consensus 110 ~~d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 110 DQWKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEESC
T ss_pred CccccHHHHHHHHHcCCCEEEEec
Confidence 1 1123455566888999999777
No 107
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=74.74 E-value=27 Score=33.56 Aligned_cols=117 Identities=21% Similarity=0.228 Sum_probs=73.8
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHH----CCCeEEEeeeccc
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDR----YPDLVIYTDVALD 222 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~----~Pdl~VitDVcLc 222 (428)
||.=|--+.. .+.+.++++.+.|+-.|.|=+-+. + .|..-.+.+ -...-|++++++ -+++.|++=. +
T Consensus 83 ~d~Gyg~~~~-~~~~~v~~l~~aGaagv~iED~~~--~---~~k~l~~~~-e~~~~I~aa~~a~~~~g~~~~i~aRt--d 153 (275)
T 2ze3_A 83 IEAGYGHAPE-DVRRTVEHFAALGVAGVNLEDATG--L---TPTELYDLD-SQLRRIEAARAAIDASGVPVFLNART--D 153 (275)
T ss_dssp CTTCSSSSHH-HHHHHHHHHHHTTCSEEEEECBCS--S---SSSCBCCHH-HHHHHHHHHHHHHHHHTSCCEEEEEC--C
T ss_pred cCCCCCCCHH-HHHHHHHHHHHcCCcEEEECCCcC--C---CCCccCCHH-HHHHHHHHHHHhHhhcCCCeEEEEec--h
Confidence 4433544554 589999999999999999855421 1 122222222 234567777766 5677776532 2
Q ss_pred CCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHHH
Q 014237 223 PYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAALD 281 (428)
Q Consensus 223 ~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aLD 281 (428)
.|. .| . |.= ..+.++.+.+-|..|++||||+|=+-.+-| -.+..|.++|+
T Consensus 154 a~~-~~----~---g~~-~~~~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~ 204 (275)
T 2ze3_A 154 TFL-KG----H---GAT-DEERLAETVRRGQAYADAGADGIFVPLALQSQDIRALADALR 204 (275)
T ss_dssp TTT-TT----C---SSS-HHHHHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCS
T ss_pred hhh-cc----c---ccc-chhhHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcC
Confidence 221 11 0 100 124688899999999999999998888876 66777777763
No 108
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=74.73 E-value=8.3 Score=36.07 Aligned_cols=70 Identities=19% Similarity=0.340 Sum_probs=43.7
Q ss_pred hhcCCceEEecCCCch---------------------------HHHHHHHHhhC-CCCeEEE--Ee----chHHHHHHHH
Q 014237 339 ESEGADILLVKPGLPY---------------------------LDVIRLLRDKY-PLPIAAY--QV----SGEYSMIKAG 384 (428)
Q Consensus 339 i~EGADilMVKPal~Y---------------------------LDII~~vk~~~-~lPvaaY--qV----SGEYaMIkaA 384 (428)
.+-|+|+|.+ +.|| +++++++|+.+ ++|+..- .= -|.-..++.+
T Consensus 41 ~~~G~D~IEl--G~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~ 118 (262)
T 2ekc_A 41 LKNGTDILEI--GFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLS 118 (262)
T ss_dssp HHTTCSEEEE--ECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHH
T ss_pred HHcCCCEEEE--CCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHH
Confidence 3467999999 6665 47899999999 8999882 10 0333445556
Q ss_pred HHCCCCc----hh---hHHHHHHHHHHHhcccEe
Q 014237 385 GALKMID----EQ---RVMMESLMCLRRAGADII 411 (428)
Q Consensus 385 a~~G~iD----~~---~~vlEsL~~~kRAGAd~I 411 (428)
++.|. | .+ +-+.|....+++.|-+.|
T Consensus 119 ~~aG~-dgvii~dl~~ee~~~~~~~~~~~gl~~i 151 (262)
T 2ekc_A 119 REKGI-DGFIVPDLPPEEAEELKAVMKKYVLSFV 151 (262)
T ss_dssp HHTTC-CEEECTTCCHHHHHHHHHHHHHTTCEEC
T ss_pred HHcCC-CEEEECCCCHHHHHHHHHHHHHcCCcEE
Confidence 66663 2 10 124455556666776654
No 109
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=74.21 E-value=10 Score=35.08 Aligned_cols=120 Identities=21% Similarity=0.275 Sum_probs=76.5
Q ss_pred HHHHHHHHHHcCCCeecCC----CCCCc---------------------hHHHHHHHHHHCCCCCceeechhhhhccccc
Q 014237 248 LCKQAVSQARAGADVVSPS----DMMDG---------------------RVGAIRAALDAEGFQHVSIMSYTAKYASSFY 302 (428)
Q Consensus 248 Lak~Als~A~AGADiVAPS----DMMDG---------------------RV~aIR~aLD~~Gf~~v~IMSYsaKyASafY 302 (428)
|.+.|-.+..+|+|+|+=+ -|.-| -+.++.++|...|.++|+|++=-.+.-+.+|
T Consensus 55 l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~~~~~A~~~al~~~g~~rvglltpy~~~~~~~~ 134 (240)
T 3ixl_A 55 VVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCTTMSTAVLNGLRALGVRRVALATAYIDDVNERL 134 (240)
T ss_dssp HHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEEEHHHHHHHHHHHTTCSEEEEEESSCHHHHHHH
T ss_pred HHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEECHHHHHHHHHHHhCCCEEEEEeCChHHHHHHH
Confidence 4777888899999999877 35443 3577888999999999999975333333444
Q ss_pred cchhhhhcC---CC-CCC--C-ccccCCCCCChHHHHHHHHhc---hhcCCceEEe-cCCCchHHHHHHHHhhCCCCeEE
Q 014237 303 GPFREALDS---NP-RFG--D-KKTYQMNPANYREALVEAQAD---ESEGADILLV-KPGLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 303 GPFRdAa~S---ap-~fg--D-RktYQmdpaN~~EAlrE~~lD---i~EGADilMV-KPal~YLDII~~vk~~~~lPvaa 371 (428)
--|=++.|= .| .+| + -.--++++. .+.++... .++|||.|++ ==.++.+++|.++.+.+++||..
T Consensus 135 ~~~l~~~Giev~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~adaivL~CT~l~~l~~i~~le~~lg~PVid 210 (240)
T 3ixl_A 135 AAFLAEESLVPTGCRSLGITGVEAMARVDTA----TLVDLCVRAFEAAPDSDGILLSSGGLLTLDAIPEVERRLGVPVVS 210 (240)
T ss_dssp HHHHHHTTCEEEEEEECCCCCHHHHHTCCHH----HHHHHHHHHHHTSTTCSEEEEECTTSCCTTHHHHHHHHHSSCEEE
T ss_pred HHHHHHCCCEEeccccCCCCCcchhhcCCHH----HHHHHHHHHhhcCCCCCEEEEeCCCCchhhhHHHHHHHhCCCEEe
Confidence 222111121 01 111 1 111234433 44444444 3679998776 45677899999999999999943
No 110
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=73.66 E-value=16 Score=28.26 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh---CCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK---YPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~---~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... ++..|+|++= |++.=+++++++++. ..+|+....-+++......|.+.|..|
T Consensus 34 ~~~~al~~l~---~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~ 101 (122)
T 3gl9_A 34 NGQIALEKLS---EFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARK 101 (122)
T ss_dssp SHHHHHHHHT---TBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHH---hcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhh
Confidence 6677777653 3568999886 666779999999875 368999887766666666666666543
No 111
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=73.63 E-value=3.3 Score=37.33 Aligned_cols=33 Identities=15% Similarity=0.342 Sum_probs=24.4
Q ss_pred hhcCCceEEe--cCC-----CchHHHHHHHHhhCCCCeEE
Q 014237 339 ESEGADILLV--KPG-----LPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 339 i~EGADilMV--KPa-----l~YLDII~~vk~~~~lPvaa 371 (428)
.+.|||.|-| +.+ ...++.|+++++.+++|+.+
T Consensus 40 ~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~ 79 (253)
T 1thf_D 40 SEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTV 79 (253)
T ss_dssp HHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEE
T ss_pred HHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEE
Confidence 4579998743 221 13589999999999999876
No 112
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=73.41 E-value=33 Score=33.47 Aligned_cols=102 Identities=18% Similarity=0.224 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHH---HHHC--CCeEEEeeecccCCCCCCccee
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLL---KDRY--PDLVIYTDVALDPYSSDGHDGI 232 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~i---K~~~--Pdl~VitDVcLc~YTshGHcGi 232 (428)
.+.+.++++.+.|+-.|.|=+.+-+ +| +|.-.-.+==.....++.| +++- ||++|++=+-- +.
T Consensus 99 ~v~~~v~~l~~aGaagv~iEDq~~~-k~--cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa--~~------- 166 (298)
T 3eoo_A 99 NIARTIRSFIKAGVGAVHLEDQVGQ-KR--CGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDA--AA------- 166 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCCC-CC--TTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECT--HH-------
T ss_pred HHHHHHHHHHHhCCeEEEECCCCCC-cc--cCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehh--hh-------
Confidence 4888899999999999999665432 12 3322111111223334444 4443 67777753321 10
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHH
Q 014237 233 VREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAAL 280 (428)
Q Consensus 233 l~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aL 280 (428)
.+.++...+-|..|++||||+|=+-.+-| -.+.++.+++
T Consensus 167 ---------~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 167 ---------AEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAV 206 (298)
T ss_dssp ---------HHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHH
T ss_pred ---------hcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHc
Confidence 12356666778899999999998877754 3456666666
No 113
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=73.32 E-value=12 Score=28.89 Aligned_cols=59 Identities=15% Similarity=0.211 Sum_probs=37.7
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALK 388 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G 388 (428)
|..||+..+. ++..|+|++= |++.-+++++.+|+.. .+|+...--..+......+.+.|
T Consensus 39 ~~~~a~~~l~---~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g 101 (130)
T 3eod_A 39 DGVDALELLG---GFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLG 101 (130)
T ss_dssp CHHHHHHHHT---TCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHC
T ss_pred CHHHHHHHHh---cCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcC
Confidence 5667776653 3458999987 6667799999999877 59998876554444444444444
No 114
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=73.29 E-value=5.5 Score=40.32 Aligned_cols=55 Identities=20% Similarity=0.289 Sum_probs=40.0
Q ss_pred hhcCCceEEe--cCCC--chHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 339 ESEGADILLV--KPGL--PYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 339 i~EGADilMV--KPal--~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
+++|+|+|.+ -.+. .++|+|+++|+.+++||.+=+|+ + .|....+.++|||+|+.
T Consensus 153 veaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~---------------t-----~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 153 VEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVV---------------T-----EEATKELIENGADGIKV 211 (400)
T ss_dssp HHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEEC---------------S-----HHHHHHHHHTTCSEEEE
T ss_pred HHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeecC---------------C-----HHHHHHHHHcCCCEEEE
Confidence 5789999987 4443 35899999999999999985552 1 22234455778998876
No 115
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=73.13 E-value=15 Score=28.47 Aligned_cols=63 Identities=22% Similarity=0.160 Sum_probs=47.1
Q ss_pred CChHHHHHHHHhchhcCCceEEec---C-CCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 326 ANYREALVEAQADESEGADILLVK---P-GLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK---P-al~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
.|..||+..... +..|+|++= | ++.-+++++.+++...+|+..+--+.+...+..+.+.|..|
T Consensus 41 ~~~~~a~~~~~~---~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~ 107 (140)
T 3cg0_A 41 DNGEEAVRCAPD---LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQDVETFQRAKRVNPFG 107 (140)
T ss_dssp SSHHHHHHHHHH---HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCCHHHHHHHHTTCCSE
T ss_pred CCHHHHHHHHHh---CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHhcCCCE
Confidence 466777766543 458999986 4 57789999999988779999988777777777777776544
No 116
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=72.97 E-value=2.9 Score=41.07 Aligned_cols=47 Identities=19% Similarity=0.137 Sum_probs=36.5
Q ss_pred CCCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhhCCCCeEE
Q 014237 322 QMNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 322 QmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~~~lPvaa 371 (428)
=+|..+.+||++-+.. + |-.+.++|+++++ .++|+.+|+.++.+|+.
T Consensus 30 ALD~~~~~eal~l~~~-l--~~~v~~vKVG~~lf~~~G~~~V~~Lk~~~g~~Ifl 81 (303)
T 3ru6_A 30 ALDLSTKEECLQLAKE-L--KNLDIWLKVGLRAYLRDGFKFIEELKKVDDFKIFL 81 (303)
T ss_dssp ECCCSSHHHHHHHHHH-T--TTSSCEEEECHHHHHHHTHHHHHHHHHHCCCEEEE
T ss_pred EeCCCCHHHHHHHHHH-h--CCCccEEEeCHHHHHHhCHHHHHHHHHhhCCCEEE
Confidence 3688899998776653 3 4456789999988 68999999987777765
No 117
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=72.89 E-value=3 Score=39.45 Aligned_cols=70 Identities=30% Similarity=0.299 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHcCCCeecC-----CCC-CCc--hHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCc
Q 014237 247 QLCKQAVSQARAGADVVSP-----SDM-MDG--RVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDK 318 (428)
Q Consensus 247 ~Lak~Als~A~AGADiVAP-----SDM-MDG--RV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDR 318 (428)
-=..||+.-|+|||+.|+| .|. .|| .|..|++.++..|| ++-||+=|
T Consensus 113 fS~~QA~~Aa~AGa~yISPfvgRi~d~g~dG~~~v~~i~~~~~~~~~-~T~IlaAS------------------------ 167 (223)
T 3s1x_A 113 FNPIQALLAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYII-KTQILVAS------------------------ 167 (223)
T ss_dssp CSHHHHHHHHHTTCSEEEEBSHHHHHTTSCTHHHHHHHHHHHHHTTC-CSEEEEBS------------------------
T ss_pred CCHHHHHHHHHcCCeEEEeecchHhhcCCCHHHHHHHHHHHHHHcCC-CCEEEEEe------------------------
Confidence 3456999999999999999 111 134 48889999999997 67788732
Q ss_pred cccCCCCCChHHHHHHHHhchhcCCceEEecCC
Q 014237 319 KTYQMNPANYREALVEAQADESEGADILLVKPG 351 (428)
Q Consensus 319 ktYQmdpaN~~EAlrE~~lDi~EGADilMVKPa 351 (428)
.+|..+.+..+ .-|||++-+=|.
T Consensus 168 ------~Rn~~~v~~aa----~~G~d~~Tip~~ 190 (223)
T 3s1x_A 168 ------IRNPIHVLRSA----VIGADVVTVPFN 190 (223)
T ss_dssp ------CCSHHHHHHHH----HHTCSEEEECHH
T ss_pred ------CCCHHHHHHHH----HcCCCEEEeCHH
Confidence 23656654433 469999998774
No 118
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=72.63 E-value=50 Score=31.83 Aligned_cols=170 Identities=18% Similarity=0.299 Sum_probs=102.3
Q ss_pred CCCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCccc--CcCcCCCCCH-----HHHHHHHHHHCCCeEEEee
Q 014237 146 AMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTG--DEAYNDNGLV-----PRTIWLLKDRYPDLVIYTD 218 (428)
Q Consensus 146 SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~G--s~A~~~~g~v-----~rAIr~iK~~~Pdl~VitD 218 (428)
.||+.|=+.. .+-+-+.|+..+++ |- . .| ...+.+-+++ ..-.+.+.+..+...|++|
T Consensus 20 ~~~tayD~~s-------A~l~e~aG~d~ilv-Gd--s-----l~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD 84 (264)
T 1m3u_A 20 ATITAYDYSF-------AKLFADEGLNVMLV-GD--S-----LGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLAD 84 (264)
T ss_dssp EEEECCSHHH-------HHHHHHHTCCEEEE-CT--T-----HHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred EEEeCcCHHH-------HHHHHHcCCCEEEE-CH--H-----HHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 3777765443 23344679999877 72 1 12 2233333322 3456778888888788899
Q ss_pred ecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCC---CCceeechhh
Q 014237 219 VALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGF---QHVSIMSYTA 295 (428)
Q Consensus 219 VcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf---~~v~IMSYsa 295 (428)
.-+-.| - +.++..+.|..+.++||+.|=-.|= +-.+..||.+- ++|. -|+++..=+.
T Consensus 85 ~pfgsy--------------~----~~~~a~~~a~rl~kaGa~aVklEgg-~e~~~~I~al~-~agipV~gHiGLtPq~v 144 (264)
T 1m3u_A 85 LPFMAY--------------A----TPEQAFENAATVMRAGANMVKIEGG-EWLVETVQMLT-ERAVPVCGHLGLTPQSV 144 (264)
T ss_dssp CCTTSS--------------S----SHHHHHHHHHHHHHTTCSEEECCCS-GGGHHHHHHHH-HTTCCEEEEEESCGGGH
T ss_pred CCCCCc--------------C----CHHHHHHHHHHHHHcCCCEEEECCc-HHHHHHHHHHH-HCCCCeEeeecCCceee
Confidence 533222 1 3355566677788899999987663 11355666554 4552 2333333332
Q ss_pred hhccccccchhhhhcCCCCCCCccccCCCCC---ChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEE
Q 014237 296 KYASSFYGPFREALDSNPRFGDKKTYQMNPA---NYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAY 372 (428)
Q Consensus 296 KyASafYGPFRdAa~Sap~fgDRktYQmdpa---N~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaY 372 (428)
.-- | .|.+--. ..+++|+.+..=.+-|||+|.+. +.+ -++++++.+..++|+...
T Consensus 145 ~~~----g----------------gf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE-~vp-~~~a~~it~~l~iP~igI 202 (264)
T 1m3u_A 145 NIF----G----------------GYKVQGRGDEAGDQLLSDALALEAAGAQLLVLE-CVP-VELAKRITEALAIPVIGI 202 (264)
T ss_dssp HHH----T----------------SSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEE-SCC-HHHHHHHHHHCSSCEEEE
T ss_pred ccc----C----------------CeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEe-cCC-HHHHHHHHHhCCCCEEEe
Confidence 211 2 1222111 13778888887788999998874 456 589999999999999864
No 119
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=72.62 E-value=23 Score=32.61 Aligned_cols=117 Identities=19% Similarity=0.153 Sum_probs=64.8
Q ss_pred HHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC-CchHHHHHHH
Q 014237 201 RTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM-DGRVGAIRAA 279 (428)
Q Consensus 201 rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMM-DGRV~aIR~a 279 (428)
..|+.||+. ++..|+.|+-| + |.-.|++..++. ++++|||+|.=.--+ ...+.+..++
T Consensus 54 ~~v~~l~~~-~g~~v~lD~Kl---------------~--DipnTv~~~~~~---~~~~gad~vtvh~~~G~~~l~~~~~~ 112 (228)
T 3m47_A 54 DIIAEFRKR-FGCRIIADFKV---------------A--DIPETNEKICRA---TFKAGADAIIVHGFPGADSVRACLNV 112 (228)
T ss_dssp HHHHHHHHH-HCCEEEEEEEE---------------C--SCHHHHHHHHHH---HHHTTCSEEEEESTTCHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCeEEEEEee---------------c--ccHhHHHHHHHH---HHhCCCCEEEEeccCCHHHHHHHHHH
Confidence 457777774 45677888755 1 466788887774 467999996543333 3345556666
Q ss_pred HHHCCCCCceee-chhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHH
Q 014237 280 LDAEGFQHVSIM-SYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVI 358 (428)
Q Consensus 280 LD~~Gf~~v~IM-SYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII 358 (428)
+.+.|- .|.++ +-+.+-+..+|. ..+.+-+.+=.+-|.|-+++=. ...+-+
T Consensus 113 ~~~~g~-~v~vLt~~s~~~~~~~~~-------------------------~~~~~~a~~a~~~G~~GvV~~a--t~~~e~ 164 (228)
T 3m47_A 113 AEEMGR-EVFLLTEMSHPGAEMFIQ-------------------------GAADEIARMGVDLGVKNYVGPS--TRPERL 164 (228)
T ss_dssp HHHHTC-EEEEECCCCSGGGGTTHH-------------------------HHHHHHHHHHHHTTCCEEECCS--SCHHHH
T ss_pred HHhcCC-CeEEEEeCCCccHHHHHH-------------------------HHHHHHHHHHHHhCCcEEEECC--CChHHH
Confidence 665552 34332 222221111111 1112222222345888766532 467888
Q ss_pred HHHHhhCC
Q 014237 359 RLLRDKYP 366 (428)
Q Consensus 359 ~~vk~~~~ 366 (428)
+++|+.++
T Consensus 165 ~~ir~~~~ 172 (228)
T 3m47_A 165 SRLREIIG 172 (228)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcC
Confidence 88888764
No 120
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=72.33 E-value=5.6 Score=35.91 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=37.1
Q ss_pred CCccccCCCCCChHHHHHHHHhchhcCCceEEec-------CCCchHHHHHHHHhhCCCCeEE
Q 014237 316 GDKKTYQMNPANYREALVEAQADESEGADILLVK-------PGLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 316 gDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-------Pal~YLDII~~vk~~~~lPvaa 371 (428)
|++..|+..+.+..|..++.+ +.|||+|-+= -....++.+++++ .+++|+.+
T Consensus 20 G~~~~~~~~~~~~~~~a~~~~---~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~-~~~ipvi~ 78 (241)
T 1qo2_A 20 GRKENTIFYEKDPVELVEKLI---EEGFTLIHVVDLSNAIENSGENLPVLEKLS-EFAEHIQI 78 (241)
T ss_dssp GCGGGEEEESSCHHHHHHHHH---HTTCCCEEEEEHHHHHHCCCTTHHHHHHGG-GGGGGEEE
T ss_pred cccccceecCcCHHHHHHHHH---HcCCCEEEEecccccccCCchhHHHHHHHH-hcCCcEEE
Confidence 667777655566667666654 5899988662 2235689999999 88899764
No 121
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=72.33 E-value=22 Score=31.10 Aligned_cols=89 Identities=16% Similarity=0.197 Sum_probs=57.9
Q ss_pred CCCCChHHHHHHHHhchhcCCceEEec-CC-Cc-hHHHHHHHHhhC-CCCeEEEEe--chHHHHHHHHHHCCC-----Cc
Q 014237 323 MNPANYREALVEAQADESEGADILLVK-PG-LP-YLDVIRLLRDKY-PLPIAAYQV--SGEYSMIKAGGALKM-----ID 391 (428)
Q Consensus 323 mdpaN~~EAlrE~~lDi~EGADilMVK-Pa-l~-YLDII~~vk~~~-~lPvaaYqV--SGEYaMIkaAa~~G~-----iD 391 (428)
+|..|.++++..+.. +..|+|++|+= |- +. =+++|+++|+.+ ++|+.+--+ -|....++.+.+.|. .+
T Consensus 7 ~D~~~~~~~~~~~~~-~~~~~diie~G~p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~ 85 (211)
T 3f4w_A 7 LDELTLPEAMVFMDK-VVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLG 85 (211)
T ss_dssp ECSCCHHHHHHHHHH-HGGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEET
T ss_pred eCCCCHHHHHHHHHH-hhcCccEEEeCcHHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeC
Confidence 477788888877654 24699999985 32 11 179999999985 899854221 233335777788773 11
Q ss_pred h--hhHHHHHHHHHHHhcccEee
Q 014237 392 E--QRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 392 ~--~~~vlEsL~~~kRAGAd~Ii 412 (428)
+ ++.+-|.+..+++.|..+++
T Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 86 VTDVLTIQSCIRAAKEAGKQVVV 108 (211)
T ss_dssp TSCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCChhHHHHHHHHHHHcCCeEEE
Confidence 1 23445666667777877764
No 122
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=72.08 E-value=78 Score=31.05 Aligned_cols=33 Identities=12% Similarity=0.062 Sum_probs=25.5
Q ss_pred hhcCCceEEecCCC------chHHHHHHHHhhCCCCeEE
Q 014237 339 ESEGADILLVKPGL------PYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 339 i~EGADilMVKPal------~YLDII~~vk~~~~lPvaa 371 (428)
.+.|+|+|-|=.+. .-++.++++|+.+++||++
T Consensus 261 ~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~ 299 (364)
T 1vyr_A 261 AKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIG 299 (364)
T ss_dssp HHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEE
T ss_pred HHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEE
Confidence 35799999885421 1378999999999999875
No 123
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=72.00 E-value=14 Score=33.75 Aligned_cols=137 Identities=17% Similarity=0.238 Sum_probs=81.3
Q ss_pred ccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccc
Q 014237 221 LDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASS 300 (428)
Q Consensus 221 Lc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASa 300 (428)
|-.|-+| +++. -...|+.++.|++.|..+ |++.|. +--+.|...++.|. ++.+.+.. .
T Consensus 4 ~~~~iDh---t~l~---p~~t~~~i~~l~~~a~~~---g~~~v~---v~~~~v~~~~~~l~-----~v~v~~v~-----~ 61 (225)
T 1mzh_A 4 VRKYIDN---AALK---PHLSEKEIEEFVLKSEEL---GIYAVC---VNPYHVKLASSIAK-----KVKVCCVI-----G 61 (225)
T ss_dssp GGGGEEE---EECC---TTCCHHHHHHHHHHHHHT---TCSEEE---ECGGGHHHHHHHCS-----SSEEEEEE-----S
T ss_pred hHhhccc---cccC---CCCCHHHHHHHHHHHHHh---CCeEEE---ECHHHHHHHHHHhc-----CCceeeEe-----c
Confidence 3455555 4452 336789999999998865 888865 33355777677663 34443221 1
Q ss_pred cccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEe----------cCCCchHHHHHHHHhhCCCCeE
Q 014237 301 FYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLV----------KPGLPYLDVIRLLRDKYPLPIA 370 (428)
Q Consensus 301 fYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMV----------KPal~YLDII~~vk~~~~lPva 370 (428)
| |+ |. | ....-..|++.=++.|||.|=+ .+.. .++.|+.+++... |+.
T Consensus 62 ~--P~----------g~----~----~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~-~~~~i~~v~~a~~-pv~ 119 (225)
T 1mzh_A 62 F--PL----------GL----N----KTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDF-VVEELKEIFRETP-SAV 119 (225)
T ss_dssp T--TT----------CC----S----CHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHH-HHHHHHHHHHTCT-TSE
T ss_pred C--CC----------Cc----c----chhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHH-HHHHHHHHHHHhc-Cce
Confidence 1 22 11 1 1111123334445678888853 1211 2456889999887 874
Q ss_pred EEEe---chHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhc
Q 014237 371 AYQV---SGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 371 aYqV---SGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
..| ++ +| +.+ -+.+.......+|||+|-|..
T Consensus 120 -vKvi~e~~-----------~l-~~~-~~~~~a~~a~eaGad~I~tst 153 (225)
T 1mzh_A 120 -HKVIVETP-----------YL-NEE-EIKKAVEICIEAGADFIKTST 153 (225)
T ss_dssp -EEEECCGG-----------GC-CHH-HHHHHHHHHHHHTCSEEECCC
T ss_pred -EEEEEeCC-----------CC-CHH-HHHHHHHHHHHhCCCEEEECC
Confidence 666 44 24 443 367778888899999998764
No 124
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=71.60 E-value=1.1e+02 Score=32.35 Aligned_cols=188 Identities=20% Similarity=0.195 Sum_probs=100.1
Q ss_pred eEEEeeCCCCcccCCCCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCC
Q 014237 132 PLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP 211 (428)
Q Consensus 132 PlFV~eg~~~~~I~SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P 211 (428)
.|.|.|-.=+.- ..-+|..+++.+ +.++.++.|.++|+..|=.-+ |.. -|.. --..+++ -...+|.|++..|
T Consensus 24 ~V~I~DtTLRDG-~Qs~~~~~~~te-dKl~Ia~~L~~~Gv~~IE~G~--pat-F~~~-~rfl~~d--~~e~lr~l~~~~~ 95 (539)
T 1rqb_A 24 EVGITELVLRDA-HQSLMATRMAME-DMVGACADIDAAGYWSVECWG--GAT-YDSC-IRFLNED--PWERLRTFRKLMP 95 (539)
T ss_dssp ECEEEECTTTHH-HHHHSTTCCCGG-GTGGGHHHHHHTTCSEEEEEE--TTH-HHHH-HHTSCCC--HHHHHHHHHHHCT
T ss_pred ceEEEECCCCch-hccCCCCCCCHH-HHHHHHHHHHHcCCCEEEeCc--ccc-cccc-hhccCCC--HHHHHHHHHHhCC
Confidence 367776441111 112334456665 488899999999999988732 110 0000 0000111 1356888888888
Q ss_pred CeEEEeee---cccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeec----CCCCCCchHHHHHHHHHHCC
Q 014237 212 DLVIYTDV---ALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVS----PSDMMDGRVGAIRAALDAEG 284 (428)
Q Consensus 212 dl~VitDV---cLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVA----PSDMMDGRV~aIR~aLD~~G 284 (428)
+..+.+=+ .++-|+. . . ..+ ++.+++.+ +++|+|+|. -||. + ++...-+.+.+.|
T Consensus 96 ~~~l~~L~R~~N~~G~~~------y-p-ddv-~~~~ve~a-------~~aGvd~vrIf~s~sd~-~-ni~~~i~~ak~~G 157 (539)
T 1rqb_A 96 NSRLQMLLRGQNLLGYRH------Y-N-DEV-VDRFVDKS-------AENGMDVFRVFDAMNDP-R-NMAHAMAAVKKAG 157 (539)
T ss_dssp TSCEEEEECGGGTTSSSC------C-C-HHH-HHHHHHHH-------HHTTCCEEEECCTTCCT-H-HHHHHHHHHHHTT
T ss_pred CCEEEEEeccccccCccc------C-c-ccc-cHHHHHHH-------HhCCCCEEEEEEehhHH-H-HHHHHHHHHHHCC
Confidence 75554322 2334431 0 0 011 45566554 367999875 4554 2 2333333445677
Q ss_pred CCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEec-------CCCchHHH
Q 014237 285 FQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVK-------PGLPYLDV 357 (428)
Q Consensus 285 f~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-------Pal~YLDI 357 (428)
..-...+||. +| + +.+.+.++.-+..=++-|||.|-+| |. .+-++
T Consensus 158 ~~v~~~i~~~-------~~---------~-----------~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~-~v~~l 209 (539)
T 1rqb_A 158 KHAQGTICYT-------IS---------P-----------VHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQ-PAYDI 209 (539)
T ss_dssp CEEEEEEECC-------CS---------T-----------TCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHH-HHHHH
T ss_pred CeEEEEEEee-------eC---------C-----------CCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHH-HHHHH
Confidence 6322234553 11 0 1144444443433345699999877 44 35799
Q ss_pred HHHHHhhC--CCCeEEEEe
Q 014237 358 IRLLRDKY--PLPIAAYQV 374 (428)
Q Consensus 358 I~~vk~~~--~lPvaaYqV 374 (428)
|+.+++++ ++|+. +|-
T Consensus 210 v~~l~~~~p~~i~I~-~H~ 227 (539)
T 1rqb_A 210 IKAIKDTYGQKTQIN-LHC 227 (539)
T ss_dssp HHHHHHHHCTTCCEE-EEE
T ss_pred HHHHHHhcCCCceEE-EEe
Confidence 99999998 68874 454
No 125
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=71.57 E-value=16 Score=27.32 Aligned_cols=62 Identities=27% Similarity=0.329 Sum_probs=43.2
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... +...|++++= |++.-+++++.+++...+|+....-+.+......+.+.|..|
T Consensus 33 ~~~~a~~~~~---~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~ 97 (120)
T 2a9o_A 33 NGREALEQFE---AEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDSEFDKVIGLELGADD 97 (120)
T ss_dssp SHHHHHHHHH---HHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCSHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHH---hCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCchHHHHHHHhCCHhh
Confidence 5566766554 2457998876 555668999999987789999887666655555555555543
No 126
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=71.51 E-value=16 Score=27.58 Aligned_cols=63 Identities=21% Similarity=0.210 Sum_probs=45.9
Q ss_pred CChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 326 ANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
.|..||+..... +..|++++= |++.-+++++.+++.. .+|+....-+++......+.+.|..|
T Consensus 34 ~~~~~a~~~~~~---~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~ 100 (120)
T 1tmy_A 34 TNGREAVEKYKE---LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKD 100 (120)
T ss_dssp SSHHHHHHHHHH---HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHh---cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHHhCcce
Confidence 367777776542 457999887 4455688999999876 59999988777777766666666544
No 127
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=71.43 E-value=12 Score=35.80 Aligned_cols=71 Identities=18% Similarity=0.317 Sum_probs=49.5
Q ss_pred hHHHHHHHHhchhcCCceEEec------CCCch-------HHHHHHHHhhC---------CCCeEEEEechHHHHHHHHH
Q 014237 328 YREALVEAQADESEGADILLVK------PGLPY-------LDVIRLLRDKY---------PLPIAAYQVSGEYSMIKAGG 385 (428)
Q Consensus 328 ~~EAlrE~~lDi~EGADilMVK------Pal~Y-------LDII~~vk~~~---------~lPvaaYqVSGEYaMIkaAa 385 (428)
.-|.+.++..-+.+|+|.|-+= ++..+ .+||+.+|+.. ++||.. -+|++
T Consensus 151 ~~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~v-Ki~~~-------- 221 (336)
T 1f76_A 151 GKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAV-KIAPD-------- 221 (336)
T ss_dssp THHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEE-ECCSC--------
T ss_pred cHHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEE-EecCC--------
Confidence 3455666666666799998663 22333 48999999887 899987 56653
Q ss_pred HCCCCchhhHHHHHHHHHHHhcccEee
Q 014237 386 ALKMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 386 ~~G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
| +.+ -+.|....+..+|+|.|+
T Consensus 222 ---~-~~~-~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 222 ---L-SEE-ELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp ---C-CHH-HHHHHHHHHHHTTCSEEE
T ss_pred ---C-CHH-HHHHHHHHHHHcCCcEEE
Confidence 3 333 356777888899999886
No 128
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=71.24 E-value=6.6 Score=37.90 Aligned_cols=107 Identities=10% Similarity=0.126 Sum_probs=71.0
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------C--CchHHHHHHHHHHCCCCCceeechhhhhccccccchh
Q 014237 235 EDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------M--DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFR 306 (428)
Q Consensus 235 ~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------M--DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFR 306 (428)
+||.|| -+.++.|++ -+.++|+|-|.+.+. | +=|...|+.+.+..+ .+++|+.=..
T Consensus 26 ~dg~iD-~~~l~~lv~---~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGvg----------- 89 (314)
T 3d0c_A 26 GTREID-WKGLDDNVE---FLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN-GRATVVAGIG----------- 89 (314)
T ss_dssp TTCCBC-HHHHHHHHH---HHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEEC-----------
T ss_pred CCCCCC-HHHHHHHHH---HHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC-CCCeEEecCC-----------
Confidence 456776 334444443 456789998877652 2 347788888887765 3788876321
Q ss_pred hhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 307 EALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 307 dAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
. |.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||.+|
T Consensus 90 ----------~---------st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~tg 147 (314)
T 3d0c_A 90 ----------Y---------SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYFKDA 147 (314)
T ss_dssp ----------S---------SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEECCT
T ss_pred ----------c---------CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 1 3457777666666679999999654222 3444577788899999999766
No 129
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=71.18 E-value=35 Score=26.62 Aligned_cols=64 Identities=13% Similarity=0.198 Sum_probs=47.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+..... -++..|+|++- |++.-+++++.+++.. .+|+...--..+...+..+.+.|..|
T Consensus 35 ~~~~a~~~~~~-~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~ 102 (143)
T 3jte_A 35 SSTEGLRIFTE-NCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFE 102 (143)
T ss_dssp SHHHHHHHHHH-TTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHh-CCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcce
Confidence 55666665442 24578999987 6666799999999987 59999987777777777777777543
No 130
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=71.10 E-value=34 Score=26.52 Aligned_cols=65 Identities=14% Similarity=0.174 Sum_probs=45.4
Q ss_pred ChHHHHHHHHhch-------hcCCceEEec---CCCchHHHHHHHHhhC---CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADE-------SEGADILLVK---PGLPYLDVIRLLRDKY---PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi-------~EGADilMVK---Pal~YLDII~~vk~~~---~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+......- ++..|+|++= |++.-+++++.+++.. .+|+..+--+.+-..+..+.+.|..+
T Consensus 40 ~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~ 117 (149)
T 1k66_A 40 TGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISS 117 (149)
T ss_dssp SHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCE
Confidence 5667776655311 1567999886 6667799999999874 58999987766666666666666544
No 131
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=71.05 E-value=36 Score=26.97 Aligned_cols=65 Identities=17% Similarity=0.258 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhc------hhcCCceEEec---CCCchHHHHHHHHh--hC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQAD------ESEGADILLVK---PGLPYLDVIRLLRD--KY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lD------i~EGADilMVK---Pal~YLDII~~vk~--~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+...... .+...|+|++= |++.=+++++.+|+ .. .+|+...--+.+-..+..+.+.|..+
T Consensus 38 ~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~ 114 (152)
T 3heb_A 38 DGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANV 114 (152)
T ss_dssp SHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcE
Confidence 566777666422 24567899886 77778999999998 44 68999887666656666666776544
No 132
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=70.46 E-value=15 Score=37.77 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=77.7
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCC
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSS 226 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTs 226 (428)
+.|...|.- +-..+.++.+.+.|+..|-+|....+ . --+..+|+.+|+.. +.|..++|. ++
T Consensus 91 ~~G~~~~~d-dv~~~~v~~a~~~Gvd~i~if~~~sd-~------------~ni~~~i~~ak~~G--~~v~~~i~~---~~ 151 (464)
T 2nx9_A 91 LLGYRHYAD-DVVDTFVERAVKNGMDVFRVFDAMND-V------------RNMQQALQAVKKMG--AHAQGTLCY---TT 151 (464)
T ss_dssp TTSSSCCCH-HHHHHHHHHHHHTTCCEEEECCTTCC-T------------HHHHHHHHHHHHTT--CEEEEEEEC---CC
T ss_pred ccCcccccc-hhhHHHHHHHHhCCcCEEEEEEecCH-H------------HHHHHHHHHHHHCC--CEEEEEEEe---ee
Confidence 444444443 23467789999999999999975432 1 12568899998874 556666642 11
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc--------hHHHHHHHHHHC-CC--CCceeechhh
Q 014237 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDG--------RVGAIRAALDAE-GF--QHVSIMSYTA 295 (428)
Q Consensus 227 hGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDG--------RV~aIR~aLD~~-Gf--~~v~IMSYsa 295 (428)
. ..- +++.+.+.+-...++|||+|+-.||.=+ .|.++|+.++-. |+ +|+.=|+.|.
T Consensus 152 ~----------~~~---~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN 218 (464)
T 2nx9_A 152 S----------PVH---NLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMT 218 (464)
T ss_dssp C----------TTC---CHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHH
T ss_pred C----------CCC---CHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHH
Confidence 1 111 4566777777778999999999998753 456666665211 21 4555566655
Q ss_pred hhcccccc
Q 014237 296 KYASSFYG 303 (428)
Q Consensus 296 KyASafYG 303 (428)
=.+..-.|
T Consensus 219 ~laAv~AG 226 (464)
T 2nx9_A 219 LLKAIEAG 226 (464)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhC
Confidence 55544444
No 133
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=70.43 E-value=8.5 Score=34.26 Aligned_cols=54 Identities=30% Similarity=0.465 Sum_probs=36.4
Q ss_pred hhcCCceEEecC--------CC--chHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcc
Q 014237 339 ESEGADILLVKP--------GL--PYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGA 408 (428)
Q Consensus 339 i~EGADilMVKP--------al--~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGA 408 (428)
.+.|||+|++=| +. .=++.++++++.+++|+.+ .|-|+.+. +..+.++||
T Consensus 127 ~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia---------------~GGI~~~n-----v~~~~~~Ga 186 (221)
T 1yad_A 127 EKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIA---------------IGGMTPDR-----LRDVKQAGA 186 (221)
T ss_dssp HHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEE---------------ESSCCGGG-----HHHHHHTTC
T ss_pred HhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEE---------------ECCCCHHH-----HHHHHHcCC
Confidence 358999999833 21 1367888888888899864 56666543 334556899
Q ss_pred cEee
Q 014237 409 DIIL 412 (428)
Q Consensus 409 d~Ii 412 (428)
|.|.
T Consensus 187 ~gv~ 190 (221)
T 1yad_A 187 DGIA 190 (221)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 9754
No 134
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=70.43 E-value=21 Score=34.60 Aligned_cols=109 Identities=16% Similarity=0.132 Sum_probs=67.7
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcC--cCCCCCHHHHHHHHHHHC--CCeEEEeeeccc
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEA--YNDNGLVPRTIWLLKDRY--PDLVIYTDVALD 222 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A--~~~~g~v~rAIr~iK~~~--Pdl~VitDVcLc 222 (428)
||.=|- +.. .+.+.++++.+.|+..|.|=+-+.+ +|- |... .-+-.-...-|++++++- |+..|++
T Consensus 89 ~d~Gyg-~~~-~~~~~v~~l~~aGa~gv~iED~~~p-Krc--gh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~a----- 158 (287)
T 3b8i_A 89 ADHGYG-NAL-NVMRTVVELERAGIAALTIEDTLLP-AQF--GRKSTDLICVEEGVGKIRAALEARVDPALTIIA----- 158 (287)
T ss_dssp CTTCSS-SHH-HHHHHHHHHHHHTCSEEEEECBCCS-CCT--TTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEE-----
T ss_pred CCCCCC-CHH-HHHHHHHHHHHhCCeEEEEcCCCCc-ccc--CCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEE-----
Confidence 343354 554 5899999999999999999665322 221 2211 111112345677777763 3444443
Q ss_pred CCCCCCcceeecCCCcccc-HHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHH
Q 014237 223 PYSSDGHDGIVREDGVIMN-DETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAAL 280 (428)
Q Consensus 223 ~YTshGHcGil~~~g~IdN-D~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aL 280 (428)
+.|. ...++.+.+-|..|++||||+|-+-.+-| -.+.+|.++|
T Consensus 159 ---------------Rtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~ 203 (287)
T 3b8i_A 159 ---------------RTNAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHL 203 (287)
T ss_dssp ---------------EEETTTSCHHHHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC
T ss_pred ---------------echhhhcCHHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC
Confidence 2221 01367788889999999999998777665 5666666666
No 135
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=70.22 E-value=1.8 Score=38.75 Aligned_cols=72 Identities=26% Similarity=0.275 Sum_probs=47.7
Q ss_pred CCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHH
Q 014237 323 MNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMM 397 (428)
Q Consensus 323 mdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vl 397 (428)
+|..|.+|+++.++ +-|+|++.+|++..+ .++|+.+|+.++.+++. ....-|--..+.
T Consensus 6 ~D~~~l~~~~~~~~---~~~~~~~~~kv~~~~f~~~G~~~i~~lr~~~~~~v~~--------------D~kl~DI~~t~~ 68 (208)
T 2czd_A 6 LDVYEGERAIKIAK---SVKDYISMIKVNWPLILGSGVDIIRRLKEETGVEIIA--------------DLKLADIPNTNR 68 (208)
T ss_dssp CCCCSHHHHHHHHH---HHGGGCSEEEEEHHHHHHHCTTHHHHHHHHHCCEEEE--------------EEEECSCHHHHH
T ss_pred ecCCCHHHHHHHHH---HhcccccEEEecHHHHHhhCHHHHHHHHHcCCCEEEE--------------EeeeCchHHHHH
Confidence 68889999988775 237899999999865 46888888874444431 111123233344
Q ss_pred HHHHHHHHhcccEe
Q 014237 398 ESLMCLRRAGADII 411 (428)
Q Consensus 398 EsL~~~kRAGAd~I 411 (428)
.....+.++|||+|
T Consensus 69 ~~v~~~~~~Gad~v 82 (208)
T 2czd_A 69 LIARKVFGAGADYV 82 (208)
T ss_dssp HHHHHHHHTTCSEE
T ss_pred HHHHHHHhcCCCEE
Confidence 55566778888877
No 136
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=70.17 E-value=10 Score=34.07 Aligned_cols=42 Identities=24% Similarity=0.304 Sum_probs=30.0
Q ss_pred ChHHHHHHHHhchhcCCceEEec-------CCCchHHHHHHHHhhCCCCeEE
Q 014237 327 NYREALVEAQADESEGADILLVK-------PGLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK-------Pal~YLDII~~vk~~~~lPvaa 371 (428)
+..|..++. .+.|||.|-+= ....+++.++++++.+++|+.+
T Consensus 32 d~~~~a~~~---~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iPvi~ 80 (252)
T 1ka9_F 32 DPVEAARAY---DEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTV 80 (252)
T ss_dssp CHHHHHHHH---HHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEE
T ss_pred CHHHHHHHH---HHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCCEEE
Confidence 445555544 46799987761 1235689999999999999986
No 137
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=70.08 E-value=24 Score=27.34 Aligned_cols=60 Identities=12% Similarity=0.087 Sum_probs=41.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKM 389 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~ 389 (428)
|..||+..... +..|+|++- |.+.-+++++.+++.. .+|+...--..+-..+..+.+.|.
T Consensus 39 ~~~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~ 102 (137)
T 3hdg_A 39 DGEEGERLFGL---HAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGV 102 (137)
T ss_dssp SHHHHHHHHHH---HCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCC
T ss_pred CHHHHHHHHhc---cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCc
Confidence 67777776643 468999998 5566789999999887 588887655444444444444444
No 138
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=69.99 E-value=15 Score=28.07 Aligned_cols=62 Identities=21% Similarity=0.356 Sum_probs=44.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... +...|++++= |++.-+++++.+++.. .+|+....-+++......+.+.|..|
T Consensus 35 ~~~~a~~~~~---~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~ 100 (124)
T 1srr_A 35 NGLQALDIVT---KERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALT 100 (124)
T ss_dssp SHHHHHHHHH---HHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCC
T ss_pred CHHHHHHHHh---ccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHh
Confidence 5677776664 2457999875 6677799999999876 58998876666665555555655544
No 139
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=69.79 E-value=5.7 Score=40.82 Aligned_cols=54 Identities=30% Similarity=0.371 Sum_probs=40.6
Q ss_pred hhcCCceEEecCCCc----hHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEee
Q 014237 339 ESEGADILLVKPGLP----YLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 339 i~EGADilMVKPal~----YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
++.|+|+|-+=-+.+ .+|+|+++|+.+ ++||.+-+|. + .|....+..||||.|+
T Consensus 240 ~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~---------------t-----~e~a~~l~~aGaD~I~ 298 (496)
T 4fxs_A 240 VEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVA---------------T-----AEGARALIEAGVSAVK 298 (496)
T ss_dssp HHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEEC---------------S-----HHHHHHHHHHTCSEEE
T ss_pred HhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccC---------------c-----HHHHHHHHHhCCCEEE
Confidence 567999999865544 479999999999 7999986552 1 1334556778999987
No 140
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=69.78 E-value=17 Score=28.59 Aligned_cols=62 Identities=18% Similarity=0.093 Sum_probs=44.5
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+..+. ++..|+|++= |++.-+++++.+++...+|+...--..+-..+..+.+.|..|
T Consensus 36 ~~~~al~~~~---~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~ 100 (136)
T 2qzj_A 36 NCEEAIGKIF---SNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGDD 100 (136)
T ss_dssp SHHHHHHHHH---HCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCCHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHH---hcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCCCHHHHHHHHHcCCcE
Confidence 6677776654 2457999875 666678999999987789998876655555556666666554
No 141
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=69.46 E-value=20 Score=27.84 Aligned_cols=62 Identities=8% Similarity=-0.049 Sum_probs=45.8
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... ++.-|+|++= |++.-+++++.+++.. .+|+...--.++......+.+.|..|
T Consensus 35 ~~~~al~~~~---~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~ 100 (132)
T 3crn_A 35 TAGEGLAKIE---NEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYASLENSVFSLNAGADA 100 (132)
T ss_dssp SHHHHHHHHH---HSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCCCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHh---cCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccccHHHHHHHHhccchh
Confidence 5667776654 3467999886 6667789999999876 58998887766666666777777655
No 142
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=69.39 E-value=20 Score=28.24 Aligned_cols=62 Identities=26% Similarity=0.298 Sum_probs=46.6
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh---CCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK---YPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~---~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+..+. ++..|+|++= |++.-+++++.+|+. ..+|+....-+++......|.+.|..|
T Consensus 36 ~~~~al~~~~---~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~ 103 (136)
T 3t6k_A 36 SGEEALQQIY---KNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGAND 103 (136)
T ss_dssp SHHHHHHHHH---HSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHH---hCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcce
Confidence 6677776654 3567999876 667779999999974 369999988877777777777777654
No 143
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=69.36 E-value=36 Score=27.04 Aligned_cols=62 Identities=16% Similarity=0.158 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+..+. +...|+|++= |.+.-+++++.+++.. .+|+...--..+...+..+.+.|..|
T Consensus 54 ~~~~al~~l~---~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~ 119 (150)
T 4e7p_A 54 NGQEAIQLLE---KESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDA 119 (150)
T ss_dssp SHHHHHHHHT---TSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHhh---ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcE
Confidence 6677776654 3558999986 6667799999999877 59999887766666666667776554
No 144
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=68.94 E-value=8 Score=36.79 Aligned_cols=107 Identities=17% Similarity=0.239 Sum_probs=71.8
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------C--CchHHHHHHHHHHCCCCCceeechhhhhccccccchhh
Q 014237 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------M--DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFRE 307 (428)
Q Consensus 236 ~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------M--DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRd 307 (428)
||.|| -+.++.|++ -+.++|+|-+.+.+. | +=|...++.+.+..+ .+++|+.=..
T Consensus 15 dg~iD-~~~l~~lv~---~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg------------ 77 (294)
T 2ehh_A 15 EGEVD-YEALGNLIE---FHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAA-GRIKVIAGTG------------ 77 (294)
T ss_dssp TTEEC-HHHHHHHHH---HHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECC------------
T ss_pred CCCcC-HHHHHHHHH---HHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC------------
Confidence 56776 334444443 456789998876553 2 247788888887754 3777775321
Q ss_pred hhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 308 ALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 308 Aa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 78 ---~--------------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 136 (294)
T 2ehh_A 78 ---G--------------NATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPS 136 (294)
T ss_dssp ---C--------------SCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred ---C--------------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 1 25788888777767789999999654221 3444577788899999999755
No 145
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=68.69 E-value=17 Score=34.48 Aligned_cols=30 Identities=17% Similarity=0.270 Sum_probs=23.1
Q ss_pred HHHHCCCCch---hhHHHHHHHHHHHhcccEee
Q 014237 383 AGGALKMIDE---QRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 383 aAa~~G~iD~---~~~vlEsL~~~kRAGAd~Ii 412 (428)
...++|+++. ++.+.|.+..+++.|+|.||
T Consensus 170 ~~ve~g~~~~~~~~~~l~~~l~~l~~~g~D~IV 202 (290)
T 2vvt_A 170 PIVESNQYRSSVAKKIVAETLQALQLKGLDTLI 202 (290)
T ss_dssp HHHHTTCTTSHHHHHHHHHHHGGGTTSCCSEEE
T ss_pred HHHHcCCCCCHHHHHHHHHHHHHHHhCCCCEEE
Confidence 3457888874 35677888888888999998
No 146
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=68.66 E-value=27 Score=26.18 Aligned_cols=62 Identities=23% Similarity=0.161 Sum_probs=44.6
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... ++..|++++= |++.-+++++.+++.. .+|+....-+++......+.+.|..|
T Consensus 32 ~~~~a~~~~~---~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~ 97 (121)
T 2pl1_A 32 DAKEADYYLN---EHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADD 97 (121)
T ss_dssp SHHHHHHHHH---HSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHh---ccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCCHHHHHHHHHcCccc
Confidence 5566666554 2357999875 5556789999999876 59999987777776666677777644
No 147
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=68.58 E-value=12 Score=33.48 Aligned_cols=62 Identities=19% Similarity=0.156 Sum_probs=42.9
Q ss_pred HHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCch-HHHHHHH
Q 014237 201 RTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGR-VGAIRAA 279 (428)
Q Consensus 201 rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGR-V~aIR~a 279 (428)
..|+.||+.+|+.-|+.|+-|. + +-.|+.. ..+++|||+|.-.--+... +.+.++.
T Consensus 45 ~~i~~l~~~~p~~~v~lD~kl~-------d----------ip~t~~~------~~~~~Gad~itvh~~~g~~~l~~~~~~ 101 (216)
T 1q6o_A 45 RAVRDLKALYPHKIVLADAKIA-------D----------AGKILSR------MCFEANADWVTVICCADINTAKGALDV 101 (216)
T ss_dssp HHHHHHHHHCTTSEEEEEEEEC-------S----------CHHHHHH------HHHHTTCSEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEEEec-------c----------cHHHHHH------HHHhCCCCEEEEeccCCHHHHHHHHHH
Confidence 4699999999999999999772 1 2334322 5778999999665444333 6677777
Q ss_pred HHHCCC
Q 014237 280 LDAEGF 285 (428)
Q Consensus 280 LD~~Gf 285 (428)
+.+.|-
T Consensus 102 ~~~~g~ 107 (216)
T 1q6o_A 102 AKEFNG 107 (216)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 776664
No 148
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=68.50 E-value=6.6 Score=39.18 Aligned_cols=55 Identities=29% Similarity=0.350 Sum_probs=38.9
Q ss_pred hhcCCceEEec----CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 339 ESEGADILLVK----PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 339 i~EGADilMVK----Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
+++|+|+|.+= +.-.++|.|+++|+.+ ++||.+-+|. + .|....+.+||||+|..
T Consensus 117 ieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~---------------t-----~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 117 VEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVA---------------T-----AEGARALIEAGVSAVKV 176 (366)
T ss_dssp HHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEEC---------------S-----HHHHHHHHHHTCSEEEE
T ss_pred HhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeC---------------C-----HHHHHHHHHcCCCEEEE
Confidence 57899999872 1125789999999999 7999886653 1 22233456778888875
No 149
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=68.27 E-value=8.1 Score=36.70 Aligned_cols=108 Identities=18% Similarity=0.285 Sum_probs=71.4
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------C--CchHHHHHHHHHHCCCCCceeechhhhhccccccchh
Q 014237 235 EDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------M--DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFR 306 (428)
Q Consensus 235 ~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------M--DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFR 306 (428)
+||.||- +.++.|++ -+.++|+|-+.+.+. | +=|...++.+.+..+ .+++|++=..
T Consensus 14 ~dg~iD~-~~l~~lv~---~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg----------- 77 (292)
T 2vc6_A 14 ADDRIDE-VALHDLVE---WQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTAN-GRVPVIAGAG----------- 77 (292)
T ss_dssp ETTEECH-HHHHHHHH---HHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECC-----------
T ss_pred CCCCcCH-HHHHHHHH---HHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC-----------
Confidence 3577763 34444444 456789999877653 2 247777887777654 3677764421
Q ss_pred hhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch----HHHH---HHHHhhCCCCeEEEEech
Q 014237 307 EALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY----LDVI---RLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 307 dAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y----LDII---~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| =.++ +.+.+.+++|+..||+-|
T Consensus 78 ----~--------------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 136 (292)
T 2vc6_A 78 ----S--------------NSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPG 136 (292)
T ss_dssp ----C--------------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred ----C--------------ccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCcc
Confidence 1 15678887777667789999998664221 2333 477888999999999754
No 150
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=68.18 E-value=30 Score=31.82 Aligned_cols=166 Identities=15% Similarity=0.151 Sum_probs=96.1
Q ss_pred HHHHHHHHCCC--eEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC---------
Q 014237 202 TIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD--------- 270 (428)
Q Consensus 202 AIr~iK~~~Pd--l~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD--------- 270 (428)
..+.|++..|+ ++-++|....||- .-..++-.+++.+.+-.+.++|+|.|.=..--+
T Consensus 15 v~~~l~~~~P~~~~iy~~D~~~~pyG------------~~s~~~i~~~~~~~~~~L~~~g~d~iviaCnTa~~~~~~~lr 82 (254)
T 1b73_A 15 VLKAIRNRYRKVDIVYLGDTARVPYG------------IRSKDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALERLK 82 (254)
T ss_dssp HHHHHHHHSTTCEEEEEECTTTCCCT------------TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHTTSHHHHH
T ss_pred HHHHHHHhCCCCcEEEeecCCCCCCC------------cCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHHHHHHHH
Confidence 56778888996 4445999988982 112333344455555556678999875332222
Q ss_pred --------c-hHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhc------CCCCCC-CccccCCCCCChHHHHHH
Q 014237 271 --------G-RVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALD------SNPRFG-DKKTYQMNPANYREALVE 334 (428)
Q Consensus 271 --------G-RV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~------Sap~fg-DRktYQmdpaN~~EAlrE 334 (428)
| -..+++.++...+-.+++||+=.....|.+|.-+-++.+ ..|.+- .-+.-++++...++.+++
T Consensus 83 ~~~~iPvigi~e~~~~~A~~~~~~~rigVlaT~~T~~~~~y~~~l~~~g~~v~~~~~~~~v~~ie~g~~~~~~~~~~l~~ 162 (254)
T 1b73_A 83 KEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSGAYQRKLEEGGADVFAKACPLFAPLAEEGLLEGEITRKVVEH 162 (254)
T ss_dssp HHSSSCEEESHHHHHHHHHHHCSSCEEEEEECHHHHHHCHHHHHHHTTSCEEEEEECCCCTTTSCGGGGSGGGHHHHHHH
T ss_pred HhCCCCEEeeeHHHHHHHHHccCCCEEEEEEChHHhhhHHHHHHHHcCCCEEEecCCHHHHHHHHCCCCCCHHHHHHHHH
Confidence 2 223556666655667899998777777788765444322 122221 111222333345677888
Q ss_pred HHhchhcCCceEEecCCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHH
Q 014237 335 AQADESEGADILLVKPGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAG 384 (428)
Q Consensus 335 ~~lDi~EGADilMVKPal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaA 384 (428)
....+.+.+|.|+.= -..|--+...+++.+ ++|+ |++--++.+++
T Consensus 163 ~~~~l~~~~d~IILG-CT~~p~l~~~i~~~~~~vpv----iDs~~~~a~~~ 208 (254)
T 1b73_A 163 YLKEFKGKIDTLILG-CTHYPLLKKEIKKFLGDAEV----VDSSEALSLSL 208 (254)
T ss_dssp HSTTTTTTCSEEEEC-CCCTTCCHHHHHHHSCSCEE----ECHHHHHHHTT
T ss_pred HHHHHHhcCCEEEEC-ccChHHHHHHHHHHcCCCeE----ECCHHHHHHHH
Confidence 877765449988874 223333566666666 6665 46666666654
No 151
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=67.89 E-value=8.2 Score=36.91 Aligned_cols=108 Identities=20% Similarity=0.313 Sum_probs=71.8
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------C--CchHHHHHHHHHHCCCCCceeechhhhhccccccchh
Q 014237 235 EDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------M--DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFR 306 (428)
Q Consensus 235 ~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------M--DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFR 306 (428)
+||.||- +.++.|++ -+.++|+|-|.+.+. | +=|...++.+.+..+ .+++|+.=..
T Consensus 14 ~dg~iD~-~~l~~lv~---~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg----------- 77 (297)
T 2rfg_A 14 INGQVDE-KALAGLVD---WQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQ-GRVPVIAGAG----------- 77 (297)
T ss_dssp ETTEECH-HHHHHHHH---HHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECC-----------
T ss_pred CCCCcCH-HHHHHHHH---HHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEccC-----------
Confidence 3577763 33444443 456789998877653 2 347777888877654 3677764321
Q ss_pred hhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 307 EALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 307 dAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 78 ----~--------------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 136 (297)
T 2rfg_A 78 ----S--------------NNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPP 136 (297)
T ss_dssp ----C--------------SSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred ----C--------------CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 1 25688887777666679999999664322 3444577788899999999765
No 152
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=67.85 E-value=35 Score=26.70 Aligned_cols=61 Identities=21% Similarity=0.186 Sum_probs=41.6
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCC---chHHHHHHHHh--hC-CCCeEEEEechHHHHHHHHHHCCCC
Q 014237 327 NYREALVEAQADESEGADILLVKPGL---PYLDVIRLLRD--KY-PLPIAAYQVSGEYSMIKAGGALKMI 390 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal---~YLDII~~vk~--~~-~lPvaaYqVSGEYaMIkaAa~~G~i 390 (428)
|..||+..+. +..-|+|++--.+ .-+++++.+|+ .. .+|+...--..+-..+..+.+.|..
T Consensus 39 ~~~~a~~~l~---~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~ 105 (144)
T 3kht_A 39 NGAKALYQVQ---QAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGAS 105 (144)
T ss_dssp SHHHHHHHHT---TCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCS
T ss_pred CHHHHHHHhh---cCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCC
Confidence 5667766654 2458999997554 45889999998 33 6999988765555555555555543
No 153
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=67.67 E-value=40 Score=25.97 Aligned_cols=62 Identities=11% Similarity=0.023 Sum_probs=44.7
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHh--hC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRD--KY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~--~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+..... +..|+|++= |++.-+++++.+++ .. .+|+...--+.+...+..+.+.|..|
T Consensus 42 ~~~~a~~~l~~---~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~ 109 (143)
T 3cnb_A 42 NPFDAGDLLHT---VKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAET 109 (143)
T ss_dssp SHHHHHHHHHH---TCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHh---cCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcE
Confidence 56666666542 458999986 66677999999998 34 69999987766666666666666544
No 154
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=67.59 E-value=26 Score=33.78 Aligned_cols=99 Identities=19% Similarity=0.241 Sum_probs=64.9
Q ss_pred cCCC-CCCCccccCCCCCChHHHHHHHHhchhcCCceEEec-----CCCc----------hHHHHHHHHhhCCCCeEEEE
Q 014237 310 DSNP-RFGDKKTYQMNPANYREALVEAQADESEGADILLVK-----PGLP----------YLDVIRLLRDKYPLPIAAYQ 373 (428)
Q Consensus 310 ~Sap-~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-----Pal~----------YLDII~~vk~~~~lPvaaYq 373 (428)
.-+| +|-|-..| .+.++|++.+..=+++|||||=|= |+.. .+-+|+.+++. ++|+..=
T Consensus 13 N~TpDSFsdgg~~----~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~piSID- 86 (280)
T 1eye_A 13 NVTDDSFSDGGCY----LDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSID- 86 (280)
T ss_dssp ECSCCTTCSSCCC----CSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-TCCEEEE-
T ss_pred eCCCCCcCCCccc----CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CCEEEEe-
Confidence 4455 47665555 367999999999999999999764 5533 36677777776 8888652
Q ss_pred echHHHHHHHHHHCC--CCch---hhHHHHHHHHHHHhcccEeehhc
Q 014237 374 VSGEYSMIKAGGALK--MIDE---QRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 374 VSGEYaMIkaAa~~G--~iD~---~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
|=....+++|.++| +|+. ....-|.+.-+++.|+-+|+...
T Consensus 87 -T~~~~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 87 -TMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp -CSCHHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECC
T ss_pred -CCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcC
Confidence 34456788888887 2321 00011345556888999999664
No 155
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=67.56 E-value=8.1 Score=36.70 Aligned_cols=109 Identities=19% Similarity=0.320 Sum_probs=74.2
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.||- +.++.|++ -+.++|+|-+-+.+. .+=|...++.+.+..+ .+++|+.-..
T Consensus 14 ~~dg~iD~-~~l~~lv~---~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---------- 78 (291)
T 3tak_A 14 LKDGGVDW-KSLEKLVE---WHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVAN-KRIPIIAGTG---------- 78 (291)
T ss_dssp CTTSCBCH-HHHHHHHH---HHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC----------
T ss_pred CCCCCcCH-HHHHHHHH---HHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-CCCeEEEeCC----------
Confidence 35677773 34444444 456799998776553 3457777887777765 3677775421
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+-.+.+.+.+++|+..||+-+
T Consensus 79 -----~--------------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~ 137 (291)
T 3tak_A 79 -----A--------------NSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPG 137 (291)
T ss_dssp -----C--------------SSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred -----C--------------CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeccc
Confidence 1 25788888777767789999998764322 4445677788899999999754
No 156
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=67.54 E-value=16 Score=34.94 Aligned_cols=94 Identities=15% Similarity=0.151 Sum_probs=60.7
Q ss_pred CCCCCChHHHHHHHHhchhcCCceEEecCCC--------chHHHHHHHHhhC-CCCeEE-E---------EechH--HHH
Q 014237 322 QMNPANYREALVEAQADESEGADILLVKPGL--------PYLDVIRLLRDKY-PLPIAA-Y---------QVSGE--YSM 380 (428)
Q Consensus 322 QmdpaN~~EAlrE~~lDi~EGADilMVKPal--------~YLDII~~vk~~~-~lPvaa-Y---------qVSGE--YaM 380 (428)
.+-..+..|++.++..=.+.|||+|=..=.+ .-.+.++.+|+.+ ++|+.. | ..|-| ...
T Consensus 45 ~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~l 124 (276)
T 3o1n_A 45 SLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDL 124 (276)
T ss_dssp EECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHH
Confidence 3444577777776654334899998653321 2346677888887 799643 3 33322 458
Q ss_pred HHHHHHCC---CCchh----hHHHHHH-HHHHHhcccEeehhc
Q 014237 381 IKAGGALK---MIDEQ----RVMMESL-MCLRRAGADIILTYF 415 (428)
Q Consensus 381 IkaAa~~G---~iD~~----~~vlEsL-~~~kRAGAd~IiTYf 415 (428)
++.|++.| ++|-+ .-.+..| ...++.|..+|++|+
T Consensus 125 l~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~~~kvI~S~H 167 (276)
T 3o1n_A 125 NRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNH 167 (276)
T ss_dssp HHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhCCCEEEEEee
Confidence 88899888 56654 2233344 345899999999998
No 157
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=67.32 E-value=41 Score=26.96 Aligned_cols=61 Identities=15% Similarity=0.166 Sum_probs=42.6
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh---CCCCeEEEEechHHHHHHHHHHCCCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK---YPLPIAAYQVSGEYSMIKAGGALKMI 390 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~---~~lPvaaYqVSGEYaMIkaAa~~G~i 390 (428)
|..||+..+. +...|+|++- |++.-+++++.+|+. ..+|+...--..+-..+..+.+.|..
T Consensus 39 ~~~~al~~l~---~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~ 105 (154)
T 3gt7_A 39 NGREAVRFLS---LTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGAD 105 (154)
T ss_dssp SHHHHHHHHT---TCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCS
T ss_pred CHHHHHHHHH---hCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCC
Confidence 5567766553 3458999987 666678999999986 36899988765555555555555543
No 158
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=67.28 E-value=12 Score=29.30 Aligned_cols=62 Identities=23% Similarity=0.326 Sum_probs=45.2
Q ss_pred ChHHHHHHHHhchhcCCceEEec--CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK--PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK--Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+..... +..|+|++= |++.-+++++.+++.+ .+|+...--..+...+..+.+.|..|
T Consensus 36 ~~~~a~~~l~~---~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~ 100 (142)
T 2qxy_A 36 NEQEAFTFLRR---EKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVD 100 (142)
T ss_dssp SHHHHHHHHTT---SCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSC
T ss_pred CHHHHHHHHhc---cCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcce
Confidence 56677766543 468999886 5556788999999887 59999987766666666666666543
No 159
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=67.17 E-value=3.4 Score=38.75 Aligned_cols=69 Identities=26% Similarity=0.341 Sum_probs=49.3
Q ss_pred HHHHHHHHHHcCCCeecC-----CCC-CC--chHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCcc
Q 014237 248 LCKQAVSQARAGADVVSP-----SDM-MD--GRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKK 319 (428)
Q Consensus 248 Lak~Als~A~AGADiVAP-----SDM-MD--GRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRk 319 (428)
=..||+.-|+|||+.|+| .|. .| ..|..|++.++..|| ++-||+=|
T Consensus 112 S~~Qa~~Aa~AGa~yISPfvgRi~d~~~dG~~~v~~i~~~~~~~~~-~t~ilaAS------------------------- 165 (212)
T 3r8r_A 112 NANQALLAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGL-DTQIIAAS------------------------- 165 (212)
T ss_dssp SHHHHHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTC-CCEEEEBS-------------------------
T ss_pred CHHHHHHHHHcCCeEEEeccchhhhcCCChHHHHHHHHHHHHHcCC-CCEEEEec-------------------------
Confidence 356999999999999999 222 13 357888888999997 77887633
Q ss_pred ccCCCCCChHHHHHHHHhchhcCCceEEecCC
Q 014237 320 TYQMNPANYREALVEAQADESEGADILLVKPG 351 (428)
Q Consensus 320 tYQmdpaN~~EAlrE~~lDi~EGADilMVKPa 351 (428)
.+|..+.+..+ .-|||++-+=|.
T Consensus 166 -----~R~~~~v~~~a----~~G~d~~Tip~~ 188 (212)
T 3r8r_A 166 -----IRHPQHVTEAA----LRGAHIGTMPLK 188 (212)
T ss_dssp -----CCSHHHHHHHH----HTTCSEEEECHH
T ss_pred -----CCCHHHHHHHH----HcCCCEEEcCHH
Confidence 23666654433 479999988664
No 160
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=67.14 E-value=8.9 Score=36.71 Aligned_cols=109 Identities=17% Similarity=0.281 Sum_probs=72.4
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------C--CchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------M--DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------M--DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.||- +.++.|++ -+.++|+|-|.+.+. | +=|...++.+.+..+ .+++|+.=..
T Consensus 25 ~~dg~iD~-~~l~~lv~---~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg---------- 89 (301)
T 1xky_A 25 DINGNIDF-AKTTKLVN---YLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD-KRVPVIAGTG---------- 89 (301)
T ss_dssp CTTSSBCH-HHHHHHHH---HHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC----------
T ss_pred CCCCCcCH-HHHHHHHH---HHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCceEEeCCC----------
Confidence 35678873 34444443 456789998877553 2 347777888887754 3677764321
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 90 -----~--------------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 148 (301)
T 1xky_A 90 -----S--------------NNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPG 148 (301)
T ss_dssp -----C--------------SCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHH
T ss_pred -----C--------------CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 1 15688887777666779999998654221 3444577788899999999765
No 161
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=67.09 E-value=21 Score=26.98 Aligned_cols=62 Identities=15% Similarity=0.073 Sum_probs=43.5
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... ++..|+|++= |++.=+++++.+++...+|+....-+++......+.+.|..|
T Consensus 35 ~~~~a~~~~~---~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~ 99 (123)
T 1xhf_A 35 DGAEMHQILS---EYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADD 99 (123)
T ss_dssp SHHHHHHHHH---HSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCSHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHh---cCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCChHHHHHHHhcCcce
Confidence 5667776654 3468999875 566678999999988778988876666665555555555543
No 162
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=66.78 E-value=9.2 Score=37.14 Aligned_cols=95 Identities=25% Similarity=0.400 Sum_probs=55.6
Q ss_pred cCCC-CCCCccccCCCCCChHHHHHHHHhchhcCCceEEe-----cCCCch----------HHHHHHHHhhCCCCeEEEE
Q 014237 310 DSNP-RFGDKKTYQMNPANYREALVEAQADESEGADILLV-----KPGLPY----------LDVIRLLRDKYPLPIAAYQ 373 (428)
Q Consensus 310 ~Sap-~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMV-----KPal~Y----------LDII~~vk~~~~lPvaaYq 373 (428)
+-+| +|-|-..|+ +.+.|++.+..=++||||||=| +|+-.. +-+|+.+++ .++|+..=-
T Consensus 14 NvTPDSFsDGG~~~----~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~-~~v~iSIDT 88 (270)
T 4hb7_A 14 NVTPDSFSDGGKFN----NVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG-FDVKISVDT 88 (270)
T ss_dssp ECC----------C----HHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT-SSSEEEEEC
T ss_pred eCCCCCCCCCCCCC----CHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc-CCCeEEEEC
Confidence 3444 355544453 6788999999999999999999 888776 456677764 677766533
Q ss_pred echHHHHHHHHHHCCC--Cch------hhHHHHHHHHHHHhcccEeehh
Q 014237 374 VSGEYSMIKAGGALKM--IDE------QRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 374 VSGEYaMIkaAa~~G~--iD~------~~~vlEsL~~~kRAGAd~IiTY 414 (428)
-.- ...++|.++|. |+. +. |.+.-+...|+-+|+.+
T Consensus 89 ~~~--~Va~~al~aGa~iINDVs~g~~d~---~m~~~va~~~~~~vlMH 132 (270)
T 4hb7_A 89 FRS--EVAEACLKLGVDMINDQWAGLYDH---RMFQIVAKYDAEIILMH 132 (270)
T ss_dssp SCH--HHHHHHHHHTCCEEEETTTTSSCT---HHHHHHHHTTCEEEEEC
T ss_pred CCH--HHHHHHHHhccceeccccccccch---hHHHHHHHcCCCeEEec
Confidence 222 34455555542 221 12 33344566788888753
No 163
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=66.58 E-value=11 Score=35.10 Aligned_cols=90 Identities=16% Similarity=0.294 Sum_probs=53.9
Q ss_pred CChHHHHHHHHhchhcCCceEEecCCCc-------hHHHHHHHHhhC-CCCe-EEEE---------ech-HH-HHHHHHH
Q 014237 326 ANYREALVEAQADESEGADILLVKPGLP-------YLDVIRLLRDKY-PLPI-AAYQ---------VSG-EY-SMIKAGG 385 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVKPal~-------YLDII~~vk~~~-~lPv-aaYq---------VSG-EY-aMIkaAa 385 (428)
.+.+|++.++..=.+.|||+|=..=... -.++++.+++.. ++|+ +.|- .|- || ..++.++
T Consensus 14 ~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~ 93 (238)
T 1sfl_A 14 LSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLA 93 (238)
T ss_dssp C---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHHHHHH
Confidence 4677888887775677999986554321 133455666666 6898 4443 221 23 5778888
Q ss_pred HCC---CCc-------hhhHHHHHHHHHHHhcccEeehhc
Q 014237 386 ALK---MID-------EQRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 386 ~~G---~iD-------~~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
+.| ++| .+..+.+.....++.|..+|++|+
T Consensus 94 ~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~H 133 (238)
T 1sfl_A 94 NINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHH 133 (238)
T ss_dssp GCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HhCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEec
Confidence 775 566 333445555566677899999998
No 164
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=66.15 E-value=8.8 Score=36.45 Aligned_cols=109 Identities=16% Similarity=0.227 Sum_probs=73.4
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------C--CchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------M--DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------M--DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.|| -+.++.|++ -+.++|+|-+.+.+. | +=|...++.+.+..+ .+++|+.=..
T Consensus 14 ~~dg~iD-~~~l~~lv~---~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---------- 78 (292)
T 2ojp_A 14 DEKGNVC-RASLKKLID---YHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLAD-GRIPVIAGTG---------- 78 (292)
T ss_dssp CTTSCBC-HHHHHHHHH---HHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC----------
T ss_pred CCCCCcC-HHHHHHHHH---HHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC----------
Confidence 3567776 344444444 456689999877553 2 347788888887754 3677775421
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 79 -----~--------------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 137 (292)
T 2ojp_A 79 -----A--------------NATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPS 137 (292)
T ss_dssp -----C--------------SSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHH
T ss_pred -----C--------------ccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 1 15688888887777789999999664322 3444577788899999999744
No 165
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=66.08 E-value=48 Score=26.31 Aligned_cols=59 Identities=7% Similarity=0.037 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALK 388 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G 388 (428)
|..||+..+. +...|+|++= |++.-+++++.+++.. .+|+...--..+...+..+.+.|
T Consensus 39 ~~~~a~~~l~---~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g 101 (154)
T 2rjn_A 39 SPLDALEALK---GTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRG 101 (154)
T ss_dssp CHHHHHHHHT---TSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTT
T ss_pred CHHHHHHHHh---cCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhcc
Confidence 5666666554 2458999986 6667899999999987 69999988888877888888877
No 166
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=66.06 E-value=14 Score=35.56 Aligned_cols=101 Identities=21% Similarity=0.314 Sum_probs=67.9
Q ss_pred hcCCC-CCCCccccCCCCCChHHHHHHHHhchhcCCceEEec-----CCCc----------hHHHHHHHHhhCCCCeEEE
Q 014237 309 LDSNP-RFGDKKTYQMNPANYREALVEAQADESEGADILLVK-----PGLP----------YLDVIRLLRDKYPLPIAAY 372 (428)
Q Consensus 309 a~Sap-~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-----Pal~----------YLDII~~vk~~~~lPvaaY 372 (428)
+.-+| +|.|--.| .+.++|++.+..=+++|||||=|= |+-. .+.+|+.+++.+++|+..=
T Consensus 21 lN~TpdSFsdgg~~----~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSID 96 (282)
T 1aj0_A 21 LNVTPDSFSDGGTH----NSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVD 96 (282)
T ss_dssp EECCTTTSCCCCCC----THHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred EeCCCCcccccccc----CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEe
Confidence 34455 36554444 367899999999999999999774 4422 3778889999899998762
Q ss_pred EechHHHHHHHHHHCCC--Cchhh--HHHHHHHHHHHhcccEeehhc
Q 014237 373 QVSGEYSMIKAGGALKM--IDEQR--VMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 373 qVSGEYaMIkaAa~~G~--iD~~~--~vlEsL~~~kRAGAd~IiTYf 415 (428)
|=....+++|.++|. |+.=. ..-|.+.-+++.|+-+|+...
T Consensus 97 --T~~~~va~aAl~aGa~iINdvsg~~d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 97 --TSKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp --CCCHHHHHHHHHTTCCEEEETTTTCSTTHHHHHHHHTCCEEEECC
T ss_pred --CCCHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhCCeEEEEcc
Confidence 334567788887763 22100 112445556888999999765
No 167
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=66.04 E-value=45 Score=26.54 Aligned_cols=59 Identities=12% Similarity=0.135 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALK 388 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G 388 (428)
|..||+..+. +..-|+|++- |++.-+++++.+|+.+ .+|+...--..+...+..+.+.|
T Consensus 46 ~~~~a~~~l~---~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g 108 (153)
T 3hv2_A 46 DATQALQLLA---SREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEG 108 (153)
T ss_dssp SHHHHHHHHH---HSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTT
T ss_pred CHHHHHHHHH---cCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCC
Confidence 6677776664 3468999986 6777899999999987 59999887777777777777777
No 168
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=65.80 E-value=22 Score=33.47 Aligned_cols=91 Identities=19% Similarity=0.302 Sum_probs=61.0
Q ss_pred CCChHHHHHHHHhchhcCCceEEecCCC-------c-hHHHHHHHHhhC-CCCeE-EEE---------echH-H-HHHHH
Q 014237 325 PANYREALVEAQADESEGADILLVKPGL-------P-YLDVIRLLRDKY-PLPIA-AYQ---------VSGE-Y-SMIKA 383 (428)
Q Consensus 325 paN~~EAlrE~~lDi~EGADilMVKPal-------~-YLDII~~vk~~~-~lPva-aYq---------VSGE-Y-aMIka 383 (428)
..+.+|.+.++..=.+.|||+|=+-=.+ . -.+.+..+|+.. ++|+. .|- .|-| | ..++.
T Consensus 28 ~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~ 107 (258)
T 4h3d_A 28 GKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKE 107 (258)
T ss_dssp CSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHHHH
Confidence 3578899999988788999998654332 1 234677788776 68975 443 3322 3 45677
Q ss_pred HHHCC---CCchh-----hHHHHHHHHHHHhcccEeehhc
Q 014237 384 GGALK---MIDEQ-----RVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 384 Aa~~G---~iD~~-----~~vlEsL~~~kRAGAd~IiTYf 415 (428)
+++.| |+|-+ +.+-+.+...++.|..+|++|+
T Consensus 108 ~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~~~kiI~S~H 147 (258)
T 4h3d_A 108 ISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVIISNH 147 (258)
T ss_dssp HHHTTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHhcCCchhhHHhhhccHHHHHHHHHHHHhCCCEEEEEEe
Confidence 88887 45543 3334444456788999999998
No 169
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=65.76 E-value=9.9 Score=36.27 Aligned_cols=109 Identities=23% Similarity=0.333 Sum_probs=73.9
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.|| -+.++.|++ -+.++|+|-+.+.+. .+=|...++.+.+..+ .+++|+.-..
T Consensus 20 ~~dg~iD-~~~l~~lv~---~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------- 84 (297)
T 3flu_A 20 NQDGSIH-YEQLRDLID---WHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA-KRVPVIAGTG---------- 84 (297)
T ss_dssp CTTSCBC-HHHHHHHHH---HHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC----------
T ss_pred CCCCCcC-HHHHHHHHH---HHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEeCC----------
Confidence 3567777 344444444 456899998776553 3457777777777665 3677775422
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||-+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 85 -----~--------------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 143 (297)
T 3flu_A 85 -----A--------------NNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPG 143 (297)
T ss_dssp -----C--------------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred -----C--------------cCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 1 25788888777767789999998764322 3445677788899999999755
No 170
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=65.68 E-value=15 Score=32.36 Aligned_cols=46 Identities=22% Similarity=0.343 Sum_probs=33.9
Q ss_pred CCCCChHHHHHHHHhchhcCCce--EEecCCC--ch----HHHHHHHHhhCCCCeEE
Q 014237 323 MNPANYREALVEAQADESEGADI--LLVKPGL--PY----LDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 323 mdpaN~~EAlrE~~lDi~EGADi--lMVKPal--~Y----LDII~~vk~~~~lPvaa 371 (428)
+|+.+..|+++.+. +.|+|+ +-++.+. .+ +++++++++.++.|+.+
T Consensus 13 ~D~~~~~~~~~~~~---~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v 66 (220)
T 2fli_A 13 ADYANFASELARIE---ETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDC 66 (220)
T ss_dssp SCGGGHHHHHHHHH---HTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEE
T ss_pred CCHHHHHHHHHHHH---HcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEE
Confidence 56677778777764 468998 4455554 45 89999999988777655
No 171
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=65.67 E-value=32 Score=26.52 Aligned_cols=63 Identities=14% Similarity=0.203 Sum_probs=46.3
Q ss_pred CChHHHHHHHHhchhcCCceEEecC--------CCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 326 ANYREALVEAQADESEGADILLVKP--------GLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVKP--------al~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
.|..||+..... ...|+|++=- .+.-+++++.+++.+ .+|+..+--..+...+..+.+.|..+
T Consensus 34 ~~~~~a~~~l~~---~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~ 105 (140)
T 2qr3_A 34 SSPVSLSTVLRE---ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASD 105 (140)
T ss_dssp CCHHHHHHHHHH---SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHc---CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchh
Confidence 366777766543 4589999853 556789999999987 69999998877777777777777644
No 172
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=65.65 E-value=2.9 Score=39.52 Aligned_cols=119 Identities=17% Similarity=0.210 Sum_probs=67.9
Q ss_pred HHHHHHHHHHcCCCeecCCCCCC----c--------------------------hHHHHHHHHHHCCCCCceeechhhhh
Q 014237 248 LCKQAVSQARAGADVVSPSDMMD----G--------------------------RVGAIRAALDAEGFQHVSIMSYTAKY 297 (428)
Q Consensus 248 Lak~Als~A~AGADiVAPSDMMD----G--------------------------RV~aIR~aLD~~Gf~~v~IMSYsaKy 297 (428)
|.+.+..+.++|+|+|.=..--+ | -+.++-++|...|.++|+|++=..+-
T Consensus 79 l~~aa~~L~~~g~d~IviaCnta~~~~G~~~~~~~~~~l~~~~~~~~~~iPv~~~~~A~~~al~~~g~~rvgvltp~~~~ 158 (273)
T 2xed_A 79 RERCVLEIADAAPEVILYACLVAVMVGGPGEHHRVESAVAEQLATGGSQALVRSSAGALVEGLRALDAQRVALVTPYMRP 158 (273)
T ss_dssp HHHHHHHHHTTCCSEEEECCHHHHHTTCTTHHHHHHHHHHHHHHHTTCCCEEEEHHHHHHHHHHHTTCCEEEEEECSCHH
T ss_pred HHHHHHHHhhcCCCEEEECCChHHHhcccchhHHHHHHHHHHhhccCCCCCEecHHHHHHHHHHHcCCCeEEEEcCChhh
Confidence 45566667778888887655222 1 13455566666787889998633332
Q ss_pred ccccccchhhhhcCCC----CCC--C-ccccCCCCCChHHHHHHHHhchh-cCCceEEec--CCCchHHHHHHHHhhCCC
Q 014237 298 ASSFYGPFREALDSNP----RFG--D-KKTYQMNPANYREALVEAQADES-EGADILLVK--PGLPYLDVIRLLRDKYPL 367 (428)
Q Consensus 298 ASafYGPFRdAa~Sap----~fg--D-RktYQmdpaN~~EAlrE~~lDi~-EGADilMVK--Pal~YLDII~~vk~~~~l 367 (428)
-+.+|--|-++.+-.. .++ | -+--+.++ +.+.++...+. .|||.|+.= =.++.++++..+.+.+++
T Consensus 159 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~g~~~~----~~l~~~~~~l~~~gadaIvLg~CT~l~~~~~~~~le~~lg~ 234 (273)
T 2xed_A 159 LAEKVVAYLEAEGFTISDWRALEVADNTEVGCIPG----EQVMAAARSLDLSEVDALVISCAVQMPSLPLVETAEREFGI 234 (273)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCCCBHHHHHTCCH----HHHHHHHHHSCCTTCSEEEEESSSSSCCTTHHHHHHHHHSS
T ss_pred hHHHHHHHHHHCCCEEeccccCCCccchhhcccCH----HHHHHHHHHHhhCCCCEEEEcCCCCcchHHhHHHHHHHhCC
Confidence 2334433333322111 011 0 11112333 34555444443 699998875 467778999999988999
Q ss_pred CeE
Q 014237 368 PIA 370 (428)
Q Consensus 368 Pva 370 (428)
||.
T Consensus 235 PVi 237 (273)
T 2xed_A 235 PVL 237 (273)
T ss_dssp CEE
T ss_pred CEE
Confidence 984
No 173
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=65.57 E-value=20 Score=32.12 Aligned_cols=184 Identities=22% Similarity=0.227 Sum_probs=92.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
+..+.++.+.+.|+..+.+-.. + ..+ ...+.....++.|++.+ ++-|+. | |
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~-~-----~~~----~~~~~~~~~i~~i~~~~-~ipvi~-----------~-------g 81 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDI-T-----ASV----EKRKTMLELVEKVAEQI-DIPFTV-----------G-------G 81 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEES-S-----CSS----SHHHHHHHHHHHHHTTC-CSCEEE-----------E-------S
T ss_pred CHHHHHHHHHHcCCCEEEEECC-c-----hhh----cCCcccHHHHHHHHHhC-CCCEEE-----------e-------C
Confidence 3788889999999999877542 1 111 11223446677777654 333333 2 2
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCC-CCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPSD-MMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFG 316 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPSD-MMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fg 316 (428)
.|.+- +++....++|||.|.=.. .+.. -..+++.+...|-+.+ +++-++|-.. |-++=... |
T Consensus 82 gI~~~-------~~~~~~~~~Gad~V~lg~~~l~~-p~~~~~~~~~~g~~~i-~~~~~~~~~~---g~~~v~~~-----g 144 (253)
T 1thf_D 82 GIHDF-------ETASELILRGADKVSINTAAVEN-PSLITQIAQTFGSQAV-VVAIDAKRVD---GEFMVFTY-----S 144 (253)
T ss_dssp SCCSH-------HHHHHHHHTTCSEEEESHHHHHC-THHHHHHHHHHCGGGE-EEEEEEEEET---TEEEEEET-----T
T ss_pred CCCCH-------HHHHHHHHcCCCEEEEChHHHhC-hHHHHHHHHHcCCCcE-EEEEEEEccC---CcEEEEEC-----C
Confidence 33222 233344468999874221 1111 1224445544443222 2333332100 00000000 0
Q ss_pred CccccCCCCCChHHHHHHHHhchhcCCceEEe---cCCCch----HHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCC
Q 014237 317 DKKTYQMNPANYREALVEAQADESEGADILLV---KPGLPY----LDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKM 389 (428)
Q Consensus 317 DRktYQmdpaN~~EAlrE~~lDi~EGADilMV---KPal~Y----LDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~ 389 (428)
-... ...+..|.+++++ +.|+|.|.+ ++...+ ++.++++++..++|+.+ .|-
T Consensus 145 ~~~~---~~~~~~e~~~~~~---~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~ipvia---------------~GG 203 (253)
T 1thf_D 145 GKKN---TGILLRDWVVEVE---KRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA---------------SGG 203 (253)
T ss_dssp TTEE---EEEEHHHHHHHHH---HTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCCSCEEE---------------ESC
T ss_pred Cccc---cCCCHHHHHHHHH---HCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcCCCEEE---------------ECC
Confidence 0000 0012345455554 479997776 665544 89999999999999876 344
Q ss_pred CchhhHHHHHHHHHHHhcccEee
Q 014237 390 IDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 390 iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
+... |-+..++.+|||.++
T Consensus 204 I~~~----~d~~~~~~~Gadgv~ 222 (253)
T 1thf_D 204 AGKM----EHFLEAFLAGADAAL 222 (253)
T ss_dssp CCSH----HHHHHHHHTTCSEEE
T ss_pred CCCH----HHHHHHHHcCChHHH
Confidence 4432 233344467888755
No 174
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=65.46 E-value=9.9 Score=36.34 Aligned_cols=108 Identities=21% Similarity=0.291 Sum_probs=73.3
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccchhh
Q 014237 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFRE 307 (428)
Q Consensus 236 ~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRd 307 (428)
||.|| -+.++.|++ -+.++|+|-+.+.+. .+=|...++.+.+..+-.+++|+.=..
T Consensus 22 dg~iD-~~~l~~lv~---~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg------------ 85 (301)
T 3m5v_A 22 NGKVD-EQSYARLIK---RQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG------------ 85 (301)
T ss_dssp TTEEC-HHHHHHHHH---HHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC------------
T ss_pred CCCCC-HHHHHHHHH---HHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC------------
Confidence 56776 334444444 456799998877553 345677777777776523677775321
Q ss_pred hhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 308 ALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 308 Aa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 86 ---~--------------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 144 (301)
T 3m5v_A 86 ---S--------------NATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPG 144 (301)
T ss_dssp ---C--------------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred ---C--------------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCch
Confidence 1 15788888887777789999999764322 3445577788899999999865
No 175
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=65.44 E-value=9.3 Score=36.25 Aligned_cols=107 Identities=16% Similarity=0.160 Sum_probs=71.5
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------C--CchHHHHHHHHHHCCCCCceeechhhhhccccccchhh
Q 014237 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------M--DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFRE 307 (428)
Q Consensus 236 ~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------M--DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRd 307 (428)
||.|| -+.++.|++ -+.++|+|-+.+.+. | +=|...++.+.+..+ .+++|+.=..
T Consensus 15 dg~iD-~~~l~~lv~---~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg------------ 77 (289)
T 2yxg_A 15 NKEVD-FDGLEENIN---FLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN-GRVQVIAGAG------------ 77 (289)
T ss_dssp TTEEC-HHHHHHHHH---HHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECC------------
T ss_pred CCCcC-HHHHHHHHH---HHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC------------
Confidence 56776 334444444 456789998877553 2 347778888887654 3677775422
Q ss_pred hhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 308 ALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 308 Aa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 78 ---~--------------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 136 (289)
T 2yxg_A 78 ---S--------------NCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPS 136 (289)
T ss_dssp ---C--------------SSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred ---C--------------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 1 15688887777666679999998654221 3444577788899999999755
No 176
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=65.44 E-value=8.3 Score=33.98 Aligned_cols=33 Identities=24% Similarity=0.560 Sum_probs=24.9
Q ss_pred hhcCCceEEec------CCC-chHHHHHHHHhhCCCCeEE
Q 014237 339 ESEGADILLVK------PGL-PYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 339 i~EGADilMVK------Pal-~YLDII~~vk~~~~lPvaa 371 (428)
.+.|+|.|.+= +.. ..+++|+++++.+++|+.+
T Consensus 43 ~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~ 82 (253)
T 1h5y_A 43 EEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLV 82 (253)
T ss_dssp HHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEE
Confidence 46799977653 222 4689999999999999875
No 177
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=65.43 E-value=19 Score=31.35 Aligned_cols=85 Identities=16% Similarity=0.203 Sum_probs=54.3
Q ss_pred CCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhhC-CCCeEE----EEechHHHHHHHHHHCCC--C
Q 014237 323 MNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDKY-PLPIAA----YQVSGEYSMIKAGGALKM--I 390 (428)
Q Consensus 323 mdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~~-~lPvaa----YqVSGEYaMIkaAa~~G~--i 390 (428)
+|..|.+|++..++ .+.+|+|+ +|.++++ +++|+++|+.+ ++|+.+ |++ ++. .++.|++.|. +
T Consensus 7 ~d~~~~~~~~~~~~-~~~~~v~~--iev~~~~~~~~g~~~i~~l~~~~~~~~i~~~l~~~di-~~~-~~~~a~~~Gad~v 81 (207)
T 3ajx_A 7 IDLLSTEAALELAG-KVAEYVDI--IELGTPLIKAEGLSVITAVKKAHPDKIVFADMKTMDA-GEL-EADIAFKAGADLV 81 (207)
T ss_dssp ECCSCHHHHHHHHH-HHGGGCSE--EEECHHHHHHHCTHHHHHHHHHSTTSEEEEEEEECSC-HHH-HHHHHHHTTCSEE
T ss_pred eCCCCHHHHHHHHH-HhhccCCE--EEECcHHHHhhCHHHHHHHHHhCCCCeEEEEEEecCc-cHH-HHHHHHhCCCCEE
Confidence 35667888776654 34559998 6778875 78999999998 799884 542 444 3466666653 1
Q ss_pred ---ch--hhHHHHHHHHHHHhcccEee
Q 014237 391 ---DE--QRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 391 ---D~--~~~vlEsL~~~kRAGAd~Ii 412 (428)
.+ +..+-+.+..+++.|..+-+
T Consensus 82 ~vh~~~~~~~~~~~~~~~~~~g~~~gv 108 (207)
T 3ajx_A 82 TVLGSADDSTIAGAVKAAQAHNKGVVV 108 (207)
T ss_dssp EEETTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEeccCChHHHHHHHHHHHHcCCceEE
Confidence 11 13444555666666766533
No 178
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=65.34 E-value=8 Score=35.60 Aligned_cols=18 Identities=17% Similarity=0.418 Sum_probs=15.6
Q ss_pred hHHHHHHHHhhCCCCeEE
Q 014237 354 YLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 354 YLDII~~vk~~~~lPvaa 371 (428)
++++++++|+.+++|+..
T Consensus 82 ~~~~i~~ir~~~~~Pv~~ 99 (262)
T 1rd5_A 82 VLEMLREVTPELSCPVVL 99 (262)
T ss_dssp HHHHHHHHGGGCSSCEEE
T ss_pred HHHHHHHHHhcCCCCEEE
Confidence 468999999999999876
No 179
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=65.29 E-value=9.2 Score=37.54 Aligned_cols=108 Identities=22% Similarity=0.287 Sum_probs=72.0
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccchh
Q 014237 235 EDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFR 306 (428)
Q Consensus 235 ~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFR 306 (428)
+||.||- +.++.|++ -+.++|+|-|.+.+. .+=|...++.+.+..+ .+++|+.=..
T Consensus 45 ~dg~ID~-~~l~~lv~---~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg----------- 108 (343)
T 2v9d_A 45 ADGQLDK-PGTAALID---DLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVD-RRVPVLIGTG----------- 108 (343)
T ss_dssp TTSSBCH-HHHHHHHH---HHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC-----------
T ss_pred CCCCcCH-HHHHHHHH---HHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC-----------
Confidence 4677763 33444443 456789998876543 2347777887777654 3677764321
Q ss_pred hhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 307 EALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 307 dAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.|.+.+++||..||+-|
T Consensus 109 ----~--------------~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~ 167 (343)
T 2v9d_A 109 ----G--------------TNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPA 167 (343)
T ss_dssp ----S--------------SCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHH
T ss_pred ----C--------------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCch
Confidence 1 15788888777666779999999654322 3444577788899999999755
No 180
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=65.12 E-value=26 Score=27.64 Aligned_cols=63 Identities=13% Similarity=0.174 Sum_probs=46.7
Q ss_pred CChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 326 ANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
.|..||+.... +...|+|++= |++.-+++++.+++.. .+|+...--.++......+.+.|..|
T Consensus 35 ~~~~~a~~~l~---~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~ 101 (137)
T 3cfy_A 35 ETGRDAIQFIE---RSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHGSVDLAVNLIQKGAED 101 (137)
T ss_dssp SSHHHHHHHHH---HHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHH---hcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecCcHHHHHHHHHCCccE
Confidence 36677776654 2457999875 6777799999999876 58998887766666667777777654
No 181
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=65.06 E-value=14 Score=33.53 Aligned_cols=42 Identities=31% Similarity=0.392 Sum_probs=29.6
Q ss_pred ChHHHHHHHHhchhcCCceEEe-------cCCCchHHHHHHHHhhCCCCeEE
Q 014237 327 NYREALVEAQADESEGADILLV-------KPGLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMV-------KPal~YLDII~~vk~~~~lPvaa 371 (428)
+..|..++.+ +.|+|.|.+ ......+++|+++++.+++|+.+
T Consensus 36 ~~~~~a~~~~---~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~ 84 (247)
T 3tdn_A 36 LLRDWVVEVE---KRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA 84 (247)
T ss_dssp EHHHHHHHHH---HTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCCSCEEE
T ss_pred CHHHHHHHHH---HcCCCEEEEEecCcccCCCcccHHHHHHHHHhCCCCEEE
Confidence 3444444443 579999976 12235689999999999999865
No 182
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=64.76 E-value=9.3 Score=38.29 Aligned_cols=125 Identities=18% Similarity=0.281 Sum_probs=80.8
Q ss_pred chHHHHHHHHHHCCCC---CceeechhhhhccccccchhhhhcCCCCCCCccccCCCCC-----ChHHHHHHHHhchhcC
Q 014237 271 GRVGAIRAALDAEGFQ---HVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPA-----NYREALVEAQADESEG 342 (428)
Q Consensus 271 GRV~aIR~aLD~~Gf~---~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpa-----N~~EAlrE~~lDi~EG 342 (428)
-+|.+||+++.+.||+ ++.||-=+| ||.||. ...|-+.-. +..||++ ....+++.
T Consensus 220 ~~l~~vreai~~~g~~~G~dv~l~vDaa--as~~~~--------------~~~Y~~~~~n~~~~t~~~ai~-~~~~L~~~ 282 (431)
T 2fym_A 220 EALAVIAEAVKAAGYELGKDITLAMDCA--ASEFYK--------------DGKYVLAGEGNKAFTSEEFTH-FLEELTKQ 282 (431)
T ss_dssp HHHHHHHHHHHHTTCCBTTTBEEEEECC--GGGGEE--------------TTEEEEGGGTTEEECHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCccEEEEeec--hhhccc--------------cCceeeccCCCCCCCHHHHHH-HHHHHHHh
Confidence 5799999999999994 688887665 788992 123554222 3566654 34445555
Q ss_pred CceEEecCCCch--HHHHHHHHhhC--CCCeEEEE--echHHHHHHHHHHCCCCch-----hh--HHHHHHHH---HHHh
Q 014237 343 ADILLVKPGLPY--LDVIRLLRDKY--PLPIAAYQ--VSGEYSMIKAGGALKMIDE-----QR--VMMESLMC---LRRA 406 (428)
Q Consensus 343 ADilMVKPal~Y--LDII~~vk~~~--~lPvaaYq--VSGEYaMIkaAa~~G~iD~-----~~--~vlEsL~~---~kRA 406 (428)
-++.++.=-++- +|=.+++++++ ++||++=. |.. -..++.+.++|.+|- .+ .+.|++.. .+.+
T Consensus 283 ~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~-~~~~~~~i~~~a~d~i~ik~~~~GGite~~~i~~~A~~~ 361 (431)
T 2fym_A 283 YPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTN-TKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDA 361 (431)
T ss_dssp SCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTC-HHHHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHT
T ss_pred CCceEEECCCCcccHHHHHHHHHHhCCCCeEEeCCcccCC-HHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHC
Confidence 678888655554 56678899988 89998633 111 245666778887663 22 36666554 4456
Q ss_pred cccEeeh
Q 014237 407 GADIILT 413 (428)
Q Consensus 407 GAd~IiT 413 (428)
|-.+++.
T Consensus 362 g~~~~~~ 368 (431)
T 2fym_A 362 GYTAVIS 368 (431)
T ss_dssp TCEEEEE
T ss_pred CCeEEEe
Confidence 6666553
No 183
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=64.44 E-value=18 Score=34.79 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHcCCCeec---------CC---CCCCchHHHHHHHHHHCCCC------Cceeechhhhhccccc---
Q 014237 244 TVHQLCKQAVSQARAGADVVS---------PS---DMMDGRVGAIRAALDAEGFQ------HVSIMSYTAKYASSFY--- 302 (428)
Q Consensus 244 Tl~~Lak~Als~A~AGADiVA---------PS---DMMDGRV~aIR~aLD~~Gf~------~v~IMSYsaKyASafY--- 302 (428)
++++..+.|-..+++|||++= |. ++-.--...+|+..++.|.. +..-.-|.+++.+.+.
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~kIgs 129 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYADMLQIGA 129 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHCSEEEECG
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHhCCeEEECc
Confidence 466777778888899999971 21 11122456788888999972 2222345555644433
Q ss_pred -----cchhhhhcCCCC-CCCccccCCCCCChHHHHHHHHhchhcCC-ceEEec------CCCch----HHHHHHHHhhC
Q 014237 303 -----GPFREALDSNPR-FGDKKTYQMNPANYREALVEAQADESEGA-DILLVK------PGLPY----LDVIRLLRDKY 365 (428)
Q Consensus 303 -----GPFRdAa~Sap~-fgDRktYQmdpaN~~EAlrE~~lDi~EGA-DilMVK------Pal~Y----LDII~~vk~~~ 365 (428)
-|+++++.+..+ -+=++.--+++.....|+..+. ..|. ++++.. |.-++ |-.|..+|+.|
T Consensus 130 ~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~---~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~ 206 (276)
T 1vs1_A 130 RNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYIL---LEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEAT 206 (276)
T ss_dssp GGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHH---HTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHB
T ss_pred ccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHH---HcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHh
Confidence 234555543221 1224444446666666655543 5786 888877 54333 44478899999
Q ss_pred CCCeEEEE
Q 014237 366 PLPIAAYQ 373 (428)
Q Consensus 366 ~lPvaaYq 373 (428)
++||..|.
T Consensus 207 ~lpVi~ds 214 (276)
T 1vs1_A 207 HLPVIVDP 214 (276)
T ss_dssp SSCEEECC
T ss_pred CCCEEEeC
Confidence 99987664
No 184
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=64.10 E-value=9.8 Score=36.56 Aligned_cols=109 Identities=23% Similarity=0.301 Sum_probs=73.5
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.||- +.++.|++ -+.++|+|-|-+.+. .+=|...++.+.+..+ .+++|+.=..
T Consensus 28 ~~dg~iD~-~~l~~lv~---~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg---------- 92 (304)
T 3l21_A 28 SGDGSLDT-ATAARLAN---HLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG-DRARVIAGAG---------- 92 (304)
T ss_dssp CTTSCBCH-HHHHHHHH---HHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECC----------
T ss_pred CCCCCcCH-HHHHHHHH---HHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEeCC----------
Confidence 34677763 33444433 456789997766543 3567777888887765 4777775421
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|=..| .+=.+.+.+.+++|+..||+-|
T Consensus 93 -----~--------------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 151 (304)
T 3l21_A 93 -----T--------------YDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPG 151 (304)
T ss_dssp -----C--------------SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHH
T ss_pred -----C--------------CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 1 15788888777767789999999764322 3445678888999999999865
No 185
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=64.08 E-value=24 Score=27.74 Aligned_cols=62 Identities=18% Similarity=0.226 Sum_probs=43.8
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHh--hC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRD--KY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~--~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+..+.. +..|+|++= |++.-+++++.+++ .. .+|+..+--+++...+..+.+.|..|
T Consensus 40 ~~~~a~~~l~~---~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~ 107 (147)
T 2zay_A 40 NAIEAVPVAVK---THPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFID 107 (147)
T ss_dssp SHHHHHHHHHH---HCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHc---CCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCE
Confidence 56666665543 358999886 66677999999998 34 69999987766666665555555543
No 186
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=64.00 E-value=9.3 Score=36.57 Aligned_cols=109 Identities=22% Similarity=0.362 Sum_probs=72.8
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.||- +.++.|++ -+.++|+|-|.+.+. .+=|...++.+.+..+ .+++|+.=..
T Consensus 17 ~~dg~iD~-~~l~~lv~---~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------- 81 (300)
T 3eb2_A 17 DAEGRVRA-DVMGRLCD---DLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQ-RRVPVVAGVA---------- 81 (300)
T ss_dssp CTTSCBCH-HHHHHHHH---HHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCBEEEEE----------
T ss_pred CCCCCcCH-HHHHHHHH---HHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhC-CCCcEEEeCC----------
Confidence 35677763 34444444 456799998876643 3457777888877754 4677775321
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||-+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 82 -----~--------------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 140 (300)
T 3eb2_A 82 -----S--------------TSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQ 140 (300)
T ss_dssp -----E--------------SSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTT
T ss_pred -----C--------------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECcc
Confidence 1 14678877776666789999999654322 3445577788899999999754
No 187
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=63.97 E-value=46 Score=25.33 Aligned_cols=65 Identities=15% Similarity=0.154 Sum_probs=44.2
Q ss_pred ChHHHHHHHHhch----hcCCceEEec---CCCchHHHHHHHHhhC---CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADE----SEGADILLVK---PGLPYLDVIRLLRDKY---PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi----~EGADilMVK---Pal~YLDII~~vk~~~---~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+......- .+-.|+|++= |++.-+++++.+++.. .+|+..+--+.+...+..+.+.|..+
T Consensus 36 ~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~ 110 (140)
T 1k68_A 36 DGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNC 110 (140)
T ss_dssp SHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhh
Confidence 5666666554311 1458999886 5667799999999874 58999987666555555556665543
No 188
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=63.96 E-value=38 Score=30.09 Aligned_cols=152 Identities=17% Similarity=0.242 Sum_probs=85.3
Q ss_pred HHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHH------
Q 014237 202 TIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGA------ 275 (428)
Q Consensus 202 AIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~a------ 275 (428)
..+.|++..|+..++. .-.||... .+ ++..+-......+.+.+..+.++|+|.|.=..--+--+.+
T Consensus 26 ~~~~~~~~~p~~~i~~--~~~p~g~~---~~---~~~~~~~~~~~~l~~~~~~l~~~g~d~iviaCnta~~~~~l~~~~~ 97 (228)
T 2eq5_A 26 HGRIIESAFPELKVVS--RCIEDQPK---GI---YNEETEREAEPKIIRLAKEFEREGVDAIIISCAADPAVEKVRKLLS 97 (228)
T ss_dssp HHHHHHHHCTTEEEEE--EECSSCTT---CC---SSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSTTCTTHHHHHHHCS
T ss_pred HHHHHHhhCCCCeEEE--EeCCCCch---hc---cccccHHHhHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhCC
Confidence 4667888899988887 33466321 11 1222223344567776767778999998765544422223
Q ss_pred ----------HHHHHHHCCCCCceeechhhhhccccccchhhhh-c------CCCCCCCccccCCCCCChHHHHHHHHhc
Q 014237 276 ----------IRAALDAEGFQHVSIMSYTAKYASSFYGPFREAL-D------SNPRFGDKKTYQMNPANYREALVEAQAD 338 (428)
Q Consensus 276 ----------IR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa-~------Sap~fgDRktYQmdpaN~~EAlrE~~lD 338 (428)
++.++ ..| .+++|++=...-.+ . |++.+ . ..+.+.+ -.+++-....+.+++....
T Consensus 98 iPvi~i~~~~~~~a~-~~~-~rigVlat~~t~~~-~---~~~~~~~~~g~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~ 169 (228)
T 2eq5_A 98 IPVIGAGSSVSALAL-AYG-RRVGVLNLTEETPK-V---IRSILGNNLIAEDHPSGVSN--TLDLLTDWGRREVINAAKR 169 (228)
T ss_dssp SCEEEHHHHHHHHHH-TTC-SSEEEECSSSCCCH-H---HHHHHGGGEEEEECCTTCCS--GGGGGSHHHHHHHHHHHHH
T ss_pred CCEeCccHHHHHHHH-HhC-CeEEEEecCcccHH-H---HHHHHHHHhCccccCCceee--HHHhcChHHHHHHHHHHHH
Confidence 33343 345 68888875443333 2 23333 1 1222322 2222211245666666666
Q ss_pred h-hcCCceEEecCCCchH--HHHHHHHhhCCCCeE
Q 014237 339 E-SEGADILLVKPGLPYL--DVIRLLRDKYPLPIA 370 (428)
Q Consensus 339 i-~EGADilMVKPal~YL--DII~~vk~~~~lPva 370 (428)
+ ++|+|.|+. =-..|- .+...+++.+++||.
T Consensus 170 l~~~~~d~IvL-gCT~~~t~~~~~~i~~~~~vpvi 203 (228)
T 2eq5_A 170 LKEKGVEVIAL-GCTGMSTIGIAPVLEEEVGIPVI 203 (228)
T ss_dssp HHHTTCSEEEE-CCTHHHHHTCHHHHHHHHSSCEE
T ss_pred HHHcCCCEEEE-CCCCcchHHHHHHHHHHcCCCEE
Confidence 5 469999887 344555 778888777788874
No 189
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=63.90 E-value=8.9 Score=37.42 Aligned_cols=109 Identities=25% Similarity=0.232 Sum_probs=72.7
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------C--CchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------M--DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------M--DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.|| -+.++.|++ -+.++|+|-|.+.+. | +=|...|+.+.+..+ .+++|+.=..
T Consensus 47 ~~dg~iD-~~~l~~lv~---~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg---------- 111 (332)
T 2r8w_A 47 DEAGRVD-IEAFSALIA---RLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILR-GRRTLMAGIG---------- 111 (332)
T ss_dssp CTTCCBC-HHHHHHHHH---HHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEEC----------
T ss_pred CCCCCcC-HHHHHHHHH---HHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC----------
Confidence 3467776 444555444 455689998877653 2 247778888887764 3677775321
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.|.+.+++||..||+-|
T Consensus 112 -----~--------------~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~ 170 (332)
T 2r8w_A 112 -----A--------------LRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPT 170 (332)
T ss_dssp -----C--------------SSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHH
T ss_pred -----C--------------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 1 15688887777666779999999664221 4444577788899999999754
No 190
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=63.79 E-value=8.1 Score=37.28 Aligned_cols=123 Identities=15% Similarity=0.226 Sum_probs=78.0
Q ss_pred HHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHH
Q 014237 206 LKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIR 277 (428)
Q Consensus 206 iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR 277 (428)
+++.|..++. .-+-||+.. ||.|| -+.++.|++ -+.++|+|-|.+.+. .+=|...++
T Consensus 8 ~~~~~~Gv~~---a~vTPf~~~--------dg~iD-~~~l~~lv~---~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~ 72 (316)
T 3e96_A 8 LAKALETISG---IPITPFRKS--------DGSID-WHHYKETVD---RIVDNGIDVIVPCGNTSEFYALSLEEAKEEVR 72 (316)
T ss_dssp HHHHTSSEEE---CCCCCBCTT--------TCCBC-HHHHHHHHH---HHHTTTCCEECTTSGGGTGGGSCHHHHHHHHH
T ss_pred hhhcCCceEE---eeeCCccCC--------CCCCC-HHHHHHHHH---HHHHcCCCEEEeCccccCcccCCHHHHHHHHH
Confidence 5555544433 234566431 56776 344444444 455799999988763 345777788
Q ss_pred HHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch---
Q 014237 278 AALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY--- 354 (428)
Q Consensus 278 ~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y--- 354 (428)
.+.+..+ .+++|+.=.. .|.+|+++.+..=.+-|||.+||=|-..+
T Consensus 73 ~~v~~~~-grvpViaGvg------------------------------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s 121 (316)
T 3e96_A 73 RTVEYVH-GRALVVAGIG------------------------------YATSTAIELGNAAKAAGADAVMIHMPIHPYVT 121 (316)
T ss_dssp HHHHHHT-TSSEEEEEEC------------------------------SSHHHHHHHHHHHHHHTCSEEEECCCCCSCCC
T ss_pred HHHHHhC-CCCcEEEEeC------------------------------cCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC
Confidence 8887765 4788875421 03567777666666679999999643211
Q ss_pred ----HHHHHHHHhhCCCCeEEEEe
Q 014237 355 ----LDVIRLLRDKYPLPIAAYQV 374 (428)
Q Consensus 355 ----LDII~~vk~~~~lPvaaYqV 374 (428)
.+=.+.+.+.+++|+..||+
T Consensus 122 ~~~l~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 122 AGGVYAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeC
Confidence 34445677788999999995
No 191
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=63.69 E-value=10 Score=36.36 Aligned_cols=107 Identities=18% Similarity=0.243 Sum_probs=71.4
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------C--CchHHHHHHHHHHCCCCCceeechhhhhccccccchhh
Q 014237 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------M--DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFRE 307 (428)
Q Consensus 236 ~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------M--DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRd 307 (428)
||.||- +.++.|+ --+.++|+|-+.+.+. | +=|...++.+.+..+ .+++|++=..
T Consensus 27 dg~iD~-~~l~~lv---~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGvg------------ 89 (306)
T 1o5k_A 27 NGELDL-ESYERLV---RYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVD-GKIPVIVGAG------------ 89 (306)
T ss_dssp TTEECH-HHHHHHH---HHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEECC------------
T ss_pred CCCcCH-HHHHHHH---HHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEcCC------------
Confidence 677763 3344444 3456789998876542 2 347788888887754 3677775421
Q ss_pred hhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 308 ALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 308 Aa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 90 ---~--------------~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 148 (306)
T 1o5k_A 90 ---T--------------NSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPG 148 (306)
T ss_dssp ---C--------------SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHH
T ss_pred ---C--------------ccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCcc
Confidence 1 15688887777666679999999654221 3444577788899999999754
No 192
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=63.67 E-value=11 Score=35.72 Aligned_cols=103 Identities=17% Similarity=0.141 Sum_probs=64.8
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHH----CCCeEEEeeecccCCCCCCcceeecC
Q 014237 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDR----YPDLVIYTDVALDPYSSDGHDGIVRE 235 (428)
Q Consensus 160 ~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~----~Pdl~VitDVcLc~YTshGHcGil~~ 235 (428)
.+.++++.+.|+..|-|=+-+ + ..|.+-++.+ -...-|++++++ -+++.|++=+-. + +.
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~--~---~~~k~l~~~~-e~~~~I~a~~~a~~~~g~~~~v~aRtd~--~--------~~- 158 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVV--H---SEGKRVREAQ-EHADYIAAARQAADVAGVDVVINGRTDA--V--------KL- 158 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEE--G---GGTTEECCHH-HHHHHHHHHHHHHHHHTCCCEEEEEECH--H--------HH-
T ss_pred HHHHHHHHHcCCcEEEECCCC--C---CCCCcccCHH-HHHHHHHHHHHHHHhcCCCeEEEEEech--h--------hc-
Confidence 677888889999999883321 0 0011111111 245667777777 566666543222 0 11
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHHH
Q 014237 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAAL 280 (428)
Q Consensus 236 ~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~aL 280 (428)
|.-++.+.++.+.+-|..|++||||+|-+-.+-+ -.+..|.++|
T Consensus 159 -g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~ 203 (255)
T 2qiw_A 159 -GADVFEDPMVEAIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAV 203 (255)
T ss_dssp -CTTTSSSHHHHHHHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTC
T ss_pred -cCCcchHHHHHHHHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhC
Confidence 2223346789999999999999999998877766 5666666665
No 193
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=63.51 E-value=30 Score=26.94 Aligned_cols=63 Identities=13% Similarity=0.177 Sum_probs=46.7
Q ss_pred CChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 326 ANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
.|..||+.... ++..|+|++= |++.=+++++.+++.. .+|+...--..+...+..+.+.|..+
T Consensus 36 ~~~~~al~~~~---~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~ 102 (133)
T 3b2n_A 36 DNGLDAMKLIE---EYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDA 102 (133)
T ss_dssp SCHHHHHHHHH---HHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHh---hcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCcE
Confidence 36777776654 2457999886 5556689999999876 59999987777777777777777655
No 194
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=63.49 E-value=54 Score=25.99 Aligned_cols=60 Identities=15% Similarity=0.082 Sum_probs=46.4
Q ss_pred CChHHHHHHHHhchhcC-CceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCC
Q 014237 326 ANYREALVEAQADESEG-ADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALK 388 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EG-ADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G 388 (428)
.|..||+..... .. -|+|++= |++.-+++++.+|+.. .+|+...--+.+...+..+.+.|
T Consensus 34 ~~~~~a~~~l~~---~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g 98 (151)
T 3kcn_A 34 ESGPEALACIKK---SDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEG 98 (151)
T ss_dssp SSHHHHHHHHHH---SCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHT
T ss_pred CCHHHHHHHHHc---CCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcC
Confidence 366777766542 23 4999986 6677899999999877 59999988888888888888888
No 195
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=63.40 E-value=29 Score=32.99 Aligned_cols=62 Identities=15% Similarity=0.199 Sum_probs=40.5
Q ss_pred hcCCceEEe-cCCCc----------h-------HHHHHHHHhhCCCCeEEE---EechHHHHHHHHHHCCCCchhhHHHH
Q 014237 340 SEGADILLV-KPGLP----------Y-------LDVIRLLRDKYPLPIAAY---QVSGEYSMIKAGGALKMIDEQRVMME 398 (428)
Q Consensus 340 ~EGADilMV-KPal~----------Y-------LDII~~vk~~~~lPvaaY---qVSGEYaMIkaAa~~G~iD~~~~vlE 398 (428)
+-|+|.||+ =+... + .++++.+|+ ..+.|-+| -.+.||. |-.|.+ .++|
T Consensus 94 ~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~-~G~~V~~~l~~~~~~e~~--------~~~~~~-~~~~ 163 (302)
T 2ftp_A 94 ESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQ-HQVRVRGYISCVLGCPYD--------GDVDPR-QVAW 163 (302)
T ss_dssp HTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECTTCBTTT--------BCCCHH-HHHH
T ss_pred hCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEEEeeCCcC--------CCCCHH-HHHH
Confidence 359999997 33322 1 455555555 45666433 3556763 556654 7789
Q ss_pred HHHHHHHhcccEe
Q 014237 399 SLMCLRRAGADII 411 (428)
Q Consensus 399 sL~~~kRAGAd~I 411 (428)
....+..+|||.|
T Consensus 164 ~~~~~~~~G~d~i 176 (302)
T 2ftp_A 164 VARELQQMGCYEV 176 (302)
T ss_dssp HHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEE
Confidence 9999999999986
No 196
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=63.36 E-value=11 Score=36.36 Aligned_cols=109 Identities=19% Similarity=0.321 Sum_probs=72.6
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.|| -+.++.|++ -+.++|+|-+.+.+. .+=|...++.+.+..+ .+++|+.=..
T Consensus 36 ~~dg~iD-~~~l~~lv~---~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaGvg---------- 100 (314)
T 3qze_A 36 DAQGRLD-WDSLAKLVD---FHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK-GRIPVIAGTG---------- 100 (314)
T ss_dssp CTTSCBC-HHHHHHHHH---HHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEECC----------
T ss_pred CCCCCcC-HHHHHHHHH---HHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC----------
Confidence 3457776 344444444 356789997766442 3456777777777765 3677775321
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 101 -----~--------------~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 159 (314)
T 3qze_A 101 -----A--------------NSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPG 159 (314)
T ss_dssp -----C--------------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHH
T ss_pred -----C--------------cCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 1 15688887777666789999999764322 3445577788899999999855
No 197
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=63.28 E-value=11 Score=37.45 Aligned_cols=90 Identities=19% Similarity=0.206 Sum_probs=56.2
Q ss_pred hhhhhcCCCCCCCccccCCCC-CChHHHHHHHHhchhcCCceEEe-------cCC-Cc-----hHHHHHHHHhhCCCCeE
Q 014237 305 FREALDSNPRFGDKKTYQMNP-ANYREALVEAQADESEGADILLV-------KPG-LP-----YLDVIRLLRDKYPLPIA 370 (428)
Q Consensus 305 FRdAa~Sap~fgDRktYQmdp-aN~~EAlrE~~lDi~EGADilMV-------KPa-l~-----YLDII~~vk~~~~lPva 370 (428)
.|+.+.+.|.+++--..|+.+ .+.++ ++++...++.||..|=+ +|. -. ++|+|+.+++.+++||.
T Consensus 113 vr~~ap~~~~~anlg~~ql~~~~~~~~-~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVi 191 (368)
T 3vkj_A 113 VRKVAPTIPIIANLGMPQLVKGYGLKE-FQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPII 191 (368)
T ss_dssp HHHHCSSSCEEEEEEGGGGGTTCCHHH-HHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEE
T ss_pred HHHhCcCcceecCcCeeecCCCCCHHH-HHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEE
Confidence 355555556666677788877 44444 44444445666666533 233 23 79999999999999998
Q ss_pred EEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEee
Q 014237 371 AYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 371 aYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
+=.|-+- +. .|....+..+|||.|.
T Consensus 192 vK~vG~g------------~s-----~~~A~~l~~aGad~I~ 216 (368)
T 3vkj_A 192 VKESGNG------------IS-----METAKLLYSYGIKNFD 216 (368)
T ss_dssp EECSSSC------------CC-----HHHHHHHHHTTCCEEE
T ss_pred EEeCCCC------------CC-----HHHHHHHHhCCCCEEE
Confidence 7544111 11 2445566678888875
No 198
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=63.22 E-value=40 Score=33.72 Aligned_cols=107 Identities=21% Similarity=0.202 Sum_probs=67.2
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.|| -+.++.|++ -+.++|+|-|.+.+. .+=|...++.+.+..+ .+++|+.=..
T Consensus 72 ~~dg~ID-~~al~~lv~---~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg---------- 136 (360)
T 4dpp_A 72 LPDGRFD-LEAYDDLVN---IQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG-GSIKVIGNTG---------- 136 (360)
T ss_dssp CTTSSBC-HHHHHHHHH---HHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECC----------
T ss_pred CCCCCcC-HHHHHHHHH---HHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC-CCCeEEEecC----------
Confidence 3467776 445555554 456899998877553 3457777888877765 4777775321
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch----HHHHH---HHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY----LDVIR---LLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y----LDII~---~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| =.+++ .+.+. +|+..||+-|
T Consensus 137 -----~--------------~st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a--~PiilYNiP~ 193 (360)
T 4dpp_A 137 -----S--------------NSTREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHM--GPTIIYNVPG 193 (360)
T ss_dssp -----C--------------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGG--SCEEEEECHH
T ss_pred -----C--------------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh--CCEEEEeCCc
Confidence 1 15677777776666779999988654211 13333 33333 6999998755
No 199
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=63.19 E-value=14 Score=39.12 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=26.0
Q ss_pred HHhchhcCCceEEe-------------cC----CCchHHHHHHHHhhCCCCeEE
Q 014237 335 AQADESEGADILLV-------------KP----GLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 335 ~~lDi~EGADilMV-------------KP----al~YLDII~~vk~~~~lPvaa 371 (428)
...=+++|+|+|=| +| ...+++.++.+|+.+++||.+
T Consensus 243 ~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~ 296 (729)
T 1o94_A 243 FVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLG 296 (729)
T ss_dssp HHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEEC
T ss_pred HHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEE
Confidence 44446678998733 11 122589999999999999875
No 200
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=63.15 E-value=35 Score=26.67 Aligned_cols=65 Identities=23% Similarity=0.264 Sum_probs=46.5
Q ss_pred ChHHHHHHHHhchh--cCCceEEec---CCCchHHHHHHHHhh--CCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADES--EGADILLVK---PGLPYLDVIRLLRDK--YPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~--EGADilMVK---Pal~YLDII~~vk~~--~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.....-.. +--|+|++= |++.=+++++.+|+. ...|+....-+++......|.+.|..|
T Consensus 35 ~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~ 106 (133)
T 2r25_B 35 DGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNG 106 (133)
T ss_dssp SHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCCCHHHHHHHHHcCCCE
Confidence 66777766543111 457888875 666778999999974 368999887777777777777777654
No 201
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=62.91 E-value=31 Score=33.81 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCc--ccCcCcCCCCCHHHHHHHHHHH----CCCeEEEeeecccCCCCCCcce
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSP--TGDEAYNDNGLVPRTIWLLKDR----YPDLVIYTDVALDPYSSDGHDG 231 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~--~Gs~A~~~~g~v~rAIr~iK~~----~Pdl~VitDVcLc~YTshGHcG 231 (428)
.+.+.++++.+.|+-.|.|=+.+.+ +|.. .|..-.+.+-.+ .=|++.+++ -||++|++=+-- |..+
T Consensus 96 ~v~~tv~~l~~aGaagv~iEDq~~~-Krcgh~~gk~l~~~~e~~-~rI~Aa~~A~~~~~~d~~I~ARTDa--~~~~---- 167 (302)
T 3fa4_A 96 MVARTTEQYSRSGVAAFHIEDQVQT-KRCGHLAGKILVDTDTYV-TRIRAAVQARQRIGSDIVVIARTDS--LQTH---- 167 (302)
T ss_dssp HHHHHHHHHHHTTCCEEEECSBCCC--------CCCBCCHHHHH-HHHHHHHHHHHHHTCCCEEEEEECC--HHHH----
T ss_pred HHHHHHHHHHHcCCcEEEECCCCCC-cccCCCCCCeecCHHHHH-HHHHHHHHHHHhcCCCEEEEEEecc--cccC----
Confidence 4788899999999999998655332 1211 111122211122 223333332 589999864321 1100
Q ss_pred eecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc-hHHHHHHHH
Q 014237 232 IVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDG-RVGAIRAAL 280 (428)
Q Consensus 232 il~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDG-RV~aIR~aL 280 (428)
| -|++++ -+-.|++||||+|-+-.+-|- .+.+|.+++
T Consensus 168 -----g---ldeAi~----Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~ 205 (302)
T 3fa4_A 168 -----G---YEESVA----RLRAARDAGADVGFLEGITSREMARQVIQDL 205 (302)
T ss_dssp -----C---HHHHHH----HHHHHHTTTCSEEEETTCCCHHHHHHHHHHT
T ss_pred -----C---HHHHHH----HHHHHHHcCCCEEeecCCCCHHHHHHHHHHh
Confidence 1 355554 467899999999988777652 355555554
No 202
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=62.69 E-value=24 Score=26.41 Aligned_cols=62 Identities=23% Similarity=0.264 Sum_probs=42.6
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... ++..|++++= |++.-+++++.+++...+|+....-+.+......+.+.|..|
T Consensus 33 ~~~~~~~~~~---~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~ 97 (121)
T 1zh2_A 33 TLQRGLLEAA---TRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADD 97 (121)
T ss_dssp SHHHHHHHHH---HHCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHh---cCCCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHhcCCCe
Confidence 5667776554 3467999875 555668999999965579998887666665555555555543
No 203
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=62.35 E-value=21 Score=27.76 Aligned_cols=64 Identities=14% Similarity=0.132 Sum_probs=43.5
Q ss_pred ChHHHHHHHHhch---hcCCceEEec---CCCchHHHHHHHHhhC---CCCeEEEEechHHHHHHHHHHCCCC
Q 014237 327 NYREALVEAQADE---SEGADILLVK---PGLPYLDVIRLLRDKY---PLPIAAYQVSGEYSMIKAGGALKMI 390 (428)
Q Consensus 327 N~~EAlrE~~lDi---~EGADilMVK---Pal~YLDII~~vk~~~---~lPvaaYqVSGEYaMIkaAa~~G~i 390 (428)
|..||+....... .+..|+|++= |++.-+++++.+++.. .+|+..+--+.+...+..+.+.|..
T Consensus 41 ~~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~ 113 (143)
T 2qvg_A 41 SGNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFESLNIR 113 (143)
T ss_dssp SHHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTTSGGGTTCEEEEEESCCCHHHHHHHTTTTCC
T ss_pred CHHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHcCccccCCcEEEEeCCCCHHHHHHHHhcCCC
Confidence 5566666655322 1457999986 6667789999999874 6899988766555555555555543
No 204
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=62.31 E-value=17 Score=31.05 Aligned_cols=76 Identities=7% Similarity=0.009 Sum_probs=55.3
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc-------hhhHHHH
Q 014237 327 NYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID-------EQRVMME 398 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD-------~~~~vlE 398 (428)
|..||+.... +...|+|+ =|++.-+++++.+++.. .+|+....-..+...+..|.+.|..| ....+.+
T Consensus 32 ~~~~al~~l~---~~~~dlvi-lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~~L~~ 107 (223)
T 2hqr_A 32 SLEDGEYLMD---IRNYDLVM-VSDKNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVA 107 (223)
T ss_dssp SHHHHHHHHT---TSCCSEEE-ECCTTHHHHHHHHHHHCTTSEEEEEESSCCHHHHHHHHHHTCSEEEETTCSCTHHHHH
T ss_pred CHHHHHHHHh---cCCCCEEE-eCCCCHHHHHHHHHhCCCCCcEEEEECCCCHHHHHHHHHcCCCEEEECCCCCHHHHHH
Confidence 5677776554 24689998 89999999999999886 79999988877778888888887654 2234555
Q ss_pred HHHHHHHh
Q 014237 399 SLMCLRRA 406 (428)
Q Consensus 399 sL~~~kRA 406 (428)
.+..+.+-
T Consensus 108 ~i~~~~~~ 115 (223)
T 2hqr_A 108 RIEARLRF 115 (223)
T ss_dssp HHHHHTSS
T ss_pred HHHHHhcc
Confidence 55555443
No 205
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=62.30 E-value=12 Score=36.18 Aligned_cols=72 Identities=24% Similarity=0.309 Sum_probs=48.7
Q ss_pred cCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhC--CCCeEEEEechHHHHHHHHHHCCCCchhhHHHH
Q 014237 321 YQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKY--PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMME 398 (428)
Q Consensus 321 YQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~--~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlE 398 (428)
-..-..|.+|+ +|+. +.|||+||+-| .+.+-++++.+.. ++|+.| || -|+ +|
T Consensus 199 IgVev~t~eea-~eA~---~aGaD~I~ld~--~~~~~~k~av~~v~~~ipi~A---sG------------GIt-----~e 252 (286)
T 1x1o_A 199 VEVEVRSLEEL-EEAL---EAGADLILLDN--FPLEALREAVRRVGGRVPLEA---SG------------NMT-----LE 252 (286)
T ss_dssp EEEEESSHHHH-HHHH---HHTCSEEEEES--CCHHHHHHHHHHHTTSSCEEE---ES------------SCC-----HH
T ss_pred EEEEeCCHHHH-HHHH---HcCCCEEEECC--CCHHHHHHHHHHhCCCCeEEE---Ec------------CCC-----HH
Confidence 33445566665 3433 57999999999 4667777766554 577765 33 355 56
Q ss_pred HHHHHHHhcccEeehhcHHH
Q 014237 399 SLMCLRRAGADIILTYFALQ 418 (428)
Q Consensus 399 sL~~~kRAGAd~IiTYfA~e 418 (428)
.+..+..+|+|+|.+-....
T Consensus 253 ni~~~a~tGvD~IsVgs~~~ 272 (286)
T 1x1o_A 253 RAKAAAEAGVDYVSVGALTH 272 (286)
T ss_dssp HHHHHHHHTCSEEECTHHHH
T ss_pred HHHHHHHcCCCEEEEcHHHc
Confidence 67889999999998744433
No 206
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=62.23 E-value=29 Score=30.94 Aligned_cols=46 Identities=24% Similarity=0.328 Sum_probs=32.0
Q ss_pred CCCCChHHHHHHHHhchhcCCceEEec-------CCCch-HHHHHHHHhhCCCCeEE
Q 014237 323 MNPANYREALVEAQADESEGADILLVK-------PGLPY-LDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 323 mdpaN~~EAlrE~~lDi~EGADilMVK-------Pal~Y-LDII~~vk~~~~lPvaa 371 (428)
.|+.+..|.++++. +-|+|+|=+- |.+.+ +++++++++.++.|+.+
T Consensus 20 ~d~~~~~~~i~~~~---~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v 73 (230)
T 1rpx_A 20 ANFSKLGEQVKAIE---QAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDV 73 (230)
T ss_dssp SCGGGHHHHHHHHH---HTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEE
T ss_pred CCHHHHHHHHHHHH---HCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEE
Confidence 34567777777663 5699988664 33333 79999999988777654
No 207
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=62.21 E-value=21 Score=33.27 Aligned_cols=65 Identities=18% Similarity=0.105 Sum_probs=43.8
Q ss_pred hcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhcHHHH
Q 014237 340 SEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQA 419 (428)
Q Consensus 340 ~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYfA~e~ 419 (428)
...++.+-..-.+.--+.|+.+++ .+++|.+|-|--+ |.+..+.+.|+|.|||-+-..+
T Consensus 216 ~~~~~~v~~~~~~~~~~~v~~~~~-~G~~v~~wTvn~~--------------------~~~~~l~~~GVdgIiTD~P~~~ 274 (287)
T 2oog_A 216 RSYAIGLGPDYTDLTEQNTHHLKD-LGFIVHPYTVNEK--------------------ADMLRLNKYGVDGVFTNFADKY 274 (287)
T ss_dssp HTTCSEEEEBGGGCCHHHHHHHHH-TTCEECCBCCCSH--------------------HHHHHHHHHTCSEEEESCHHHH
T ss_pred hhhheEEcccHhhcCHHHHHHHHH-CCCeEEEEeCCCH--------------------HHHHHHHHcCCCEEEeCCHHHH
Confidence 345665543222222467777775 5799999888432 2344566789999999999888
Q ss_pred HHHHhc
Q 014237 420 ARCLCG 425 (428)
Q Consensus 420 a~wL~~ 425 (428)
.++|.+
T Consensus 275 ~~~~~~ 280 (287)
T 2oog_A 275 KEVIKE 280 (287)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 899875
No 208
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=62.05 E-value=15 Score=33.73 Aligned_cols=61 Identities=23% Similarity=0.235 Sum_probs=42.3
Q ss_pred HHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC-chHHHHHHH
Q 014237 201 RTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-GRVGAIRAA 279 (428)
Q Consensus 201 rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-GRV~aIR~a 279 (428)
..|+.||+.+|+..|+.|+-| | |+-.|+... .+++|||+|.=..... ..+.+.+++
T Consensus 47 ~~v~~l~~~~p~~~iflDlKl-------~----------Dip~t~~~~------~~~~Gad~vtVH~~~g~~~l~~a~~~ 103 (221)
T 3exr_A 47 ELVEVLRSLFPDKIIVADTKC-------A----------DAGGTVAKN------NAVRGADWMTCICSATIPTMKAARKA 103 (221)
T ss_dssp HHHHHHHHHCTTSEEEEEEEE-------C----------SCHHHHHHH------HHTTTCSEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEEe-------e----------ccHHHHHHH------HHHcCCCEEEEeccCCHHHHHHHHHH
Confidence 579999999999999999876 1 345665543 4899999954333222 346667777
Q ss_pred HHHCC
Q 014237 280 LDAEG 284 (428)
Q Consensus 280 LD~~G 284 (428)
+.+.|
T Consensus 104 ~~~~g 108 (221)
T 3exr_A 104 IEDIN 108 (221)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 76665
No 209
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=61.96 E-value=20 Score=35.82 Aligned_cols=76 Identities=22% Similarity=0.246 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEe-eecccCCCCCCcceeecCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT-DVALDPYSSDGHDGIVRED 236 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vit-DVcLc~YTshGHcGil~~~ 236 (428)
...+.++.+++.|+.-|.+-. +. |. . -.+...|+.||+.+|++.||. .| .
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~--a~------G~----~-~~~~e~I~~ir~~~~~~~Vi~G~V-------------~--- 150 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDV--AH------AH----A-KYVGKTLKSLRQLLGSRCIMAGNV-------------A--- 150 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC--SC------CS----S-HHHHHHHHHHHHHHTTCEEEEEEE-------------C---
T ss_pred HHHHHHHHHHHcCCCEEEEeC--CC------CC----c-HhHHHHHHHHHHhcCCCeEEEcCc-------------C---
Confidence 467889999999999555521 11 11 1 124578999999999988886 22 1
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHH
Q 014237 237 GVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVG 274 (428)
Q Consensus 237 g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~ 274 (428)
| .+.|....++|||.|-=| +--|++.
T Consensus 151 -------T----~e~A~~a~~aGaD~I~Vg-~g~G~~~ 176 (361)
T 3r2g_A 151 -------T----YAGADYLASCGADIIKAG-IGGGSVC 176 (361)
T ss_dssp -------S----HHHHHHHHHTTCSEEEEC-CSSSSCH
T ss_pred -------C----HHHHHHHHHcCCCEEEEc-CCCCcCc
Confidence 1 234666778999988753 3335543
No 210
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=61.83 E-value=12 Score=38.18 Aligned_cols=55 Identities=18% Similarity=0.350 Sum_probs=39.3
Q ss_pred hhcCCceEEecCCCc----hHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 339 ESEGADILLVKPGLP----YLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 339 i~EGADilMVKPal~----YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
++.|+|+|.+=-+.- .+++|+.+|+.+ ++||.+-.| .+ .|....+.++|||.|+.
T Consensus 264 ~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v---------------~t-----~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 264 TQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNV---------------VT-----AAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEE---------------CS-----HHHHHHHHHHTCSEEEE
T ss_pred HHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEeccc---------------ch-----HHHHHHHHHcCCCEEEE
Confidence 568999999833322 469999999999 899987555 11 23345667789998843
No 211
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=61.81 E-value=34 Score=26.10 Aligned_cols=62 Identities=18% Similarity=0.227 Sum_probs=43.2
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..|++.... ++..|++++= |++.=+++++.+++.. .+|+....-.++......+.+.|..|
T Consensus 35 ~~~~~~~~~~---~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~ 100 (126)
T 1dbw_A 35 SAEAFLAFAP---DVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVD 100 (126)
T ss_dssp CHHHHHHHGG---GCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHh---cCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHH
Confidence 4555555432 2357888875 6667789999999876 69999987766666666666666644
No 212
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=61.80 E-value=29 Score=26.18 Aligned_cols=62 Identities=18% Similarity=0.115 Sum_probs=42.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..|++.... ++.-|++++= |++.-+++++.+++...+|+....-+++......+.+.|..|
T Consensus 34 ~~~~~~~~~~---~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~ 98 (122)
T 1zgz_A 34 SGAGLREIMQ---NQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADD 98 (122)
T ss_dssp SHHHHHHHHH---HSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHh---cCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCCChhhHHHHHHhCHHH
Confidence 4455554433 2457888875 666678999999995579998887766666666666666544
No 213
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=61.76 E-value=42 Score=33.43 Aligned_cols=46 Identities=22% Similarity=0.299 Sum_probs=32.6
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEe
Q 014237 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (428)
Q Consensus 159 l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vit 217 (428)
..+.++.+++.|+.-|.|.- .. | +++ -+...|+.+|+.+|++.||.
T Consensus 109 ~~~~~~~lieaGvd~I~idt--a~------G----~~~-~~~~~I~~ik~~~p~v~Vi~ 154 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDS--SH------G----HSE-GVLQRIRETRAAYPHLEIIG 154 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEEC--SC------T----TSH-HHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHhCCCCEEEEeC--CC------C----CCH-HHHHHHHHHHHhcCCCceEe
Confidence 57788999999999776632 11 1 111 34568999999999988776
No 214
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=61.65 E-value=15 Score=36.41 Aligned_cols=55 Identities=20% Similarity=0.295 Sum_probs=39.2
Q ss_pred hhcCCceEEec--CCC--chHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 339 ESEGADILLVK--PGL--PYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 339 i~EGADilMVK--Pal--~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
++.|+|+|.+= .+. .++|.|+++|+.+++||.+-+|. + .|....+.++|||.|+.
T Consensus 114 ~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v~---------------t-----~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 114 VEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVV---------------T-----EEATKELIENGADGIKV 172 (361)
T ss_dssp HHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEEC---------------S-----HHHHHHHHHTTCSEEEE
T ss_pred HHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccCC---------------C-----HHHHHHHHHcCcCEEEE
Confidence 56899999872 222 46899999999999999986552 1 22334556788888864
No 215
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=61.62 E-value=9.9 Score=36.12 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=71.7
Q ss_pred cCCCccccHHHHHHHHHHHHHHHH-cCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccc
Q 014237 234 REDGVIMNDETVHQLCKQAVSQAR-AGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGP 304 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~-AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGP 304 (428)
++||.|| -+.++.|++ -+.+ +|+|-|.+.+. .+=|...++.+.+..+ .+++|++=..
T Consensus 16 ~~dg~iD-~~~l~~lv~---~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg--------- 81 (293)
T 1f6k_A 16 NEDGTIN-EKGLRQIIR---HNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQVG--------- 81 (293)
T ss_dssp CTTSCBC-HHHHHHHHH---HHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECC---------
T ss_pred CCCCCcC-HHHHHHHHH---HHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEecC---------
Confidence 3467776 334444444 4566 89998876542 2347778888887765 3788875422
Q ss_pred hhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 305 FREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 305 FRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 82 ------~--------------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 140 (293)
T 1f6k_A 82 ------S--------------VNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPF 140 (293)
T ss_dssp ------C--------------SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHH
T ss_pred ------C--------------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECcc
Confidence 1 15688887776656679999999654221 3444567778899999999744
No 216
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=61.59 E-value=14 Score=34.97 Aligned_cols=64 Identities=19% Similarity=0.181 Sum_probs=47.3
Q ss_pred CCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhcHHHHHH
Q 014237 342 GADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAAR 421 (428)
Q Consensus 342 GADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYfA~e~a~ 421 (428)
|+|.+-..-.+.--+.|+.+++ .+++|.+|-|- .. |.+..+...|+|.|||-+-..+.+
T Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~-~Gl~V~~WTVn----------------~~----~~~~~l~~~GVDgIiTD~P~~~~~ 303 (313)
T 3l12_A 245 GGQLWCPYFLDVTPELVAEAHD-LGLIVLTWTVN----------------EP----EDIRRMATTGVDGIVTDYPGRTQR 303 (313)
T ss_dssp TCSEEEEBGGGCCHHHHHHHHH-TTCEEEEBCCC----------------SH----HHHHHHHHHTCSEEEESCHHHHHH
T ss_pred CCcEEecchhcCCHHHHHHHHH-CCCEEEEEcCC----------------CH----HHHHHHHHcCCCEEEeCCHHHHHH
Confidence 5888765433333578888876 48999999984 22 345556778999999999998888
Q ss_pred HHhcc
Q 014237 422 CLCGE 426 (428)
Q Consensus 422 wL~~~ 426 (428)
+|++.
T Consensus 304 ~l~~~ 308 (313)
T 3l12_A 304 ILIDM 308 (313)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 88753
No 217
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=61.39 E-value=9.9 Score=36.18 Aligned_cols=108 Identities=13% Similarity=0.219 Sum_probs=71.0
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++| .|| -+.++.|++ -+.++|+|-|.+.+. .+=|...++.+.+..+ .+++|+.=..
T Consensus 16 ~~d-~iD-~~~l~~lv~---~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg---------- 79 (292)
T 3daq_A 16 TNN-KVN-LEALKAHVN---FLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGTG---------- 79 (292)
T ss_dssp ETT-EEC-HHHHHHHHH---HHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC----------
T ss_pred CCC-CcC-HHHHHHHHH---HHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeCC----------
Confidence 345 665 344444444 456899998877543 3456777777777654 4677765321
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 80 -----~--------------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~ 138 (292)
T 3daq_A 80 -----T--------------NDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPS 138 (292)
T ss_dssp -----C--------------SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHH
T ss_pred -----c--------------ccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeccc
Confidence 1 15788887776666679999999764322 3445567777899999999754
No 218
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=61.06 E-value=27 Score=37.17 Aligned_cols=98 Identities=19% Similarity=0.261 Sum_probs=63.5
Q ss_pred hhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecC
Q 014237 156 RHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE 235 (428)
Q Consensus 156 ~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~ 235 (428)
..+-.+.++.|++.|+.-+.+ +.. .|... -+..+++.||+.||++.||+=
T Consensus 279 ~~d~~eR~~aLv~AGvD~ivi----D~a----hGhs~-----~v~~~i~~ik~~~p~~~viaG----------------- 328 (556)
T 4af0_A 279 RPGDKDRLKLLAEAGLDVVVL----DSS----QGNSV-----YQIEFIKWIKQTYPKIDVIAG----------------- 328 (556)
T ss_dssp SHHHHHHHHHHHHTTCCEEEE----CCS----CCCSH-----HHHHHHHHHHHHCTTSEEEEE-----------------
T ss_pred CccHHHHHHHHHhcCCcEEEE----ecc----ccccH-----HHHHHHHHHHhhCCcceEEec-----------------
Confidence 334688999999999986655 322 23222 267899999999999988852
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCee----cCCC-----CC----CchHHHHHHHHHHCCCCCceeec
Q 014237 236 DGVIMNDETVHQLCKQAVSQARAGADVV----SPSD-----MM----DGRVGAIRAALDAEGFQHVSIMS 292 (428)
Q Consensus 236 ~g~IdND~Tl~~Lak~Als~A~AGADiV----APSD-----MM----DGRV~aIR~aLD~~Gf~~v~IMS 292 (428)
.|-. .++|..+.+||||.| .|-. ++ -.++.||.+.-+.+.-.+|+|++
T Consensus 329 --NVaT-------~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIA 389 (556)
T 4af0_A 329 --NVVT-------REQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIA 389 (556)
T ss_dssp --EECS-------HHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred --cccC-------HHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEe
Confidence 1211 456777888999998 3432 22 25677777765544333455544
No 219
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=60.92 E-value=19 Score=27.55 Aligned_cols=60 Identities=13% Similarity=0.056 Sum_probs=40.7
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CC-CchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PG-LPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALK 388 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pa-l~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G 388 (428)
|..||+...... +..|+|++= |. +.-+++++.+++.. .+|+....-..+......+.+.|
T Consensus 37 ~~~~a~~~l~~~--~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~ 101 (132)
T 2rdm_A 37 SGAKAIEMLKSG--AAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHAALEWASNGVPDS 101 (132)
T ss_dssp SHHHHHHHHHTT--CCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSCCTTHHHHSCTTC
T ss_pred CHHHHHHHHHcC--CCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCccHHHHHhhcCCc
Confidence 566777655422 258999886 54 66789999999887 59999887666555444444433
No 220
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=60.90 E-value=34 Score=32.06 Aligned_cols=29 Identities=14% Similarity=0.232 Sum_probs=23.1
Q ss_pred HHHCCCCch---hhHHHHHHHHHHHhcccEee
Q 014237 384 GGALKMIDE---QRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 384 Aa~~G~iD~---~~~vlEsL~~~kRAGAd~Ii 412 (428)
..++|+++. ++.+.|.+..+++.|+|.||
T Consensus 154 ~ve~g~~~~~~~~~~l~~~l~~l~~~~~D~IV 185 (276)
T 2dwu_A 154 VVENRLEDTAYVTQQVKQALLPLTKEDIDTLI 185 (276)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHHHTSCCSEEE
T ss_pred HHHcCCcCCHHHHHHHHHHHHHHHhcCCCEEE
Confidence 356788873 35788888889989999998
No 221
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=60.84 E-value=48 Score=29.02 Aligned_cols=92 Identities=21% Similarity=0.237 Sum_probs=58.3
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCc
Q 014237 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (428)
Q Consensus 159 l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~ 238 (428)
..+.++.+.+.|+..|+++++ . .+..+ .|+-...++.+++.. ++-|++ +|-
T Consensus 156 ~~e~~~~~~~~G~d~i~~~~~-~---~~g~~------~~~~~~~i~~l~~~~-~~pvia------------------~GG 206 (253)
T 1h5y_A 156 AVKWAKEVEELGAGEILLTSI-D---RDGTG------LGYDVELIRRVADSV-RIPVIA------------------SGG 206 (253)
T ss_dssp HHHHHHHHHHHTCSEEEEEET-T---TTTTC------SCCCHHHHHHHHHHC-SSCEEE------------------ESC
T ss_pred HHHHHHHHHhCCCCEEEEecc-c---CCCCc------CcCCHHHHHHHHHhc-CCCEEE------------------eCC
Confidence 577889999999999999985 2 12222 123356778887753 333322 255
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeec-CCCCCCc--hHHHHHHHHHHCCCC
Q 014237 239 IMNDETVHQLCKQAVSQARAGADVVS-PSDMMDG--RVGAIRAALDAEGFQ 286 (428)
Q Consensus 239 IdND~Tl~~Lak~Als~A~AGADiVA-PSDMMDG--RV~aIR~aLD~~Gf~ 286 (428)
|.+-+.+..+ .++|||.|. -|..+.+ .+..+++.|+++||.
T Consensus 207 i~~~~~~~~~-------~~~Ga~~v~vgsal~~~~~~~~~~~~~l~~~g~~ 250 (253)
T 1h5y_A 207 AGRVEHFYEA-------AAAGADAVLAASLFHFRVLSIAQVKRYLKERGVE 250 (253)
T ss_dssp CCSHHHHHHH-------HHTTCSEEEESHHHHTTSSCHHHHHHHHHHTTCB
T ss_pred CCCHHHHHHH-------HHcCCcHHHHHHHHHcCCCCHHHHHHHHHHcCCC
Confidence 5554444442 257999653 3444444 378999999999983
No 222
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=60.70 E-value=29 Score=33.93 Aligned_cols=112 Identities=15% Similarity=0.237 Sum_probs=71.2
Q ss_pred cccccchh---hhhcCCC-CCCCc--cccCCCCCChHHHHHHHHhchhcCCceEEec-----CCCch------HHHHHHH
Q 014237 299 SSFYGPFR---EALDSNP-RFGDK--KTYQMNPANYREALVEAQADESEGADILLVK-----PGLPY------LDVIRLL 361 (428)
Q Consensus 299 SafYGPFR---dAa~Sap-~fgDR--ktYQmdpaN~~EAlrE~~lDi~EGADilMVK-----Pal~Y------LDII~~v 361 (428)
-.||.|-+ +.++-+| +|-|- ..|+ |+- +.++..+..=+++|||||=|. |+... +++|+.+
T Consensus 41 ~~~~~~p~i~m~I~n~tpdsf~d~i~~~~~-~~~--~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v 117 (310)
T 2h9a_B 41 GEMPNPPRFALEVFDTPPTDWPDILVEPFK-DVI--NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAV 117 (310)
T ss_dssp SCCCSCCEEEEEEESSCCSSCCHHHHGGGT-TTT--TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHH
T ss_pred cCCCCCCeEEEEEeeCCCcccchhhhhhhc-cHH--HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHH
Confidence 34555555 5556677 56554 5553 110 345556666679999999887 44221 8899999
Q ss_pred HhhCCCCeEEEEec----hHHHHHHHHHHCCC-----Cc---hhhHHHHHHHHHHHhcccEeehhc
Q 014237 362 RDKYPLPIAAYQVS----GEYSMIKAGGALKM-----ID---EQRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 362 k~~~~lPvaaYqVS----GEYaMIkaAa~~G~-----iD---~~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
++.+++|+..+- | =.-..+++|.+.|. |+ .. -.-+.+...++.|+-+|+...
T Consensus 118 ~~~~~vplsI~D-T~~~~~~~~V~eaal~aga~~k~iINdvs~~-~~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 118 ADAIDVPLMIIG-CGVEEKDAEIFPVIGEALSGRNCLLSSATKD-NYKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp HHHCSSCEEEEC-CSCHHHHHHHHHHHHHHTTTSCCEEEEECTT-THHHHHHHHHHHTCEEEEECS
T ss_pred HHhCCceEEEEC-CCCCCCCHHHHHHHHHhCCCCCCEEEECCCC-ccHHHHHHHHHhCCCEEEECh
Confidence 999999996622 3 34567777777753 33 12 123445556888999988765
No 223
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=60.69 E-value=22 Score=31.92 Aligned_cols=19 Identities=16% Similarity=0.268 Sum_probs=15.9
Q ss_pred hHHHHHHHHhhCCCCeEEE
Q 014237 354 YLDVIRLLRDKYPLPIAAY 372 (428)
Q Consensus 354 YLDII~~vk~~~~lPvaaY 372 (428)
.+++|+++|+.+++||..-
T Consensus 68 ~~~~i~~i~~~~~~pv~~~ 86 (248)
T 1geq_A 68 AFWIVKEFRRHSSTPIVLM 86 (248)
T ss_dssp HHHHHHHHHTTCCCCEEEE
T ss_pred HHHHHHHHHhhCCCCEEEE
Confidence 3899999999999997653
No 224
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=60.58 E-value=15 Score=34.84 Aligned_cols=106 Identities=9% Similarity=0.111 Sum_probs=65.3
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.||- +.++.|++ -+.++|+|-|.+.+. .+=|...++.+.+..+ . |+. |
T Consensus 12 ~~dg~iD~-~~l~~lv~---~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~--g--Via----------G-- 71 (288)
T 2nuw_A 12 DKQGKVNV-DALKTHAK---NLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTH--K--LIF----------Q-- 71 (288)
T ss_dssp CTTSCBCH-HHHHHHHH---HHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCS--C--EEE----------E--
T ss_pred CCCCCcCH-HHHHHHHH---HHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--C--eEE----------e--
Confidence 35677763 34444444 456789998876543 2235566666555432 1 221 1
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch--------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY--------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y--------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ |. .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 72 ---v------g~--------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 133 (288)
T 2nuw_A 72 ---V------GS--------LNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPA 133 (288)
T ss_dssp ---C------CC--------SCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred ---e------CC--------CCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECch
Confidence 1 11 26788888777666779999999654322 2233467788899999999755
No 225
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=60.41 E-value=14 Score=35.42 Aligned_cols=108 Identities=12% Similarity=0.121 Sum_probs=72.3
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCeecCCC--------CCCchHHHHHHHHHHCCCCCceeechhhhhccccccchh
Q 014237 235 EDGVIMNDETVHQLCKQAVSQARAGADVVSPSD--------MMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFR 306 (428)
Q Consensus 235 ~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSD--------MMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFR 306 (428)
+||.||-+ .++.|++ -+.++|+|-+.+.+ -.+=|...++.+.+..+ .+++|+.=..
T Consensus 28 ~dg~iD~~-~l~~lv~---~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg----------- 91 (307)
T 3s5o_A 28 ATAEVDYG-KLEENLH---KLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMP-KNRLLLAGSG----------- 91 (307)
T ss_dssp TTSCBCHH-HHHHHHH---HHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSC-TTSEEEEECC-----------
T ss_pred CCCCcCHH-HHHHHHH---HHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcC-CCCcEEEecC-----------
Confidence 46777633 4444444 46689999876554 24467777777777665 4677765321
Q ss_pred hhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchH------HHH---HHHHhhCCCCeEEEEech
Q 014237 307 EALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYL------DVI---RLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 307 dAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YL------DII---~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..|- .|+ +.+.+.+++|+..||+-|
T Consensus 92 ----~--------------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 152 (307)
T 3s5o_A 92 ----C--------------ESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPA 152 (307)
T ss_dssp ----C--------------SSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred ----C--------------CCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCc
Confidence 1 167888887776677899999996544331 233 466678899999999855
No 226
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=60.13 E-value=41 Score=26.70 Aligned_cols=91 Identities=12% Similarity=0.110 Sum_probs=62.0
Q ss_pred CCChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCch------hh
Q 014237 325 PANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDE------QR 394 (428)
Q Consensus 325 paN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~------~~ 394 (428)
..|..||+.... ++..|+|++= |++.-+++++.+++.. .+|+..+--+.+......+.+.|..|. ..
T Consensus 37 ~~~~~~a~~~l~---~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~ 113 (153)
T 3cz5_A 37 AADAGEAYRLYR---ETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDPA 113 (153)
T ss_dssp ESSHHHHHHHHH---TTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEETTSCTT
T ss_pred eCCHHHHHHHHh---cCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEecCCCHH
Confidence 346778777654 2458999986 5666789999999987 599999887777777788888887652 23
Q ss_pred HHHHHHHHHHHhcccEeehhcHHHHHHHH
Q 014237 395 VMMESLMCLRRAGADIILTYFALQAARCL 423 (428)
Q Consensus 395 ~vlEsL~~~kRAGAd~IiTYfA~e~a~wL 423 (428)
.+.+.+..+.+-. .|+.+++++.|
T Consensus 114 ~L~~~i~~~~~~~-----~~~~~~~~~~l 137 (153)
T 3cz5_A 114 ELVQAIEAILAGR-----RAMSPDIAQEI 137 (153)
T ss_dssp HHHHHHHHHTTTC-----CEECHHHHHHH
T ss_pred HHHHHHHHHHhCC-----ccCChHHHHHH
Confidence 4555555444332 34555555544
No 227
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=59.83 E-value=5.3 Score=32.95 Aligned_cols=36 Identities=11% Similarity=0.111 Sum_probs=24.9
Q ss_pred CCCCchHHHHHHHHHHCCCCCceeechh-hhhcccccc
Q 014237 267 DMMDGRVGAIRAALDAEGFQHVSIMSYT-AKYASSFYG 303 (428)
Q Consensus 267 DMMDGRV~aIR~aLD~~Gf~~v~IMSYs-aKyASafYG 303 (428)
+||+ |+..+|+.|.++|..-+-|.+-. -.|-|.|.|
T Consensus 1 ~~m~-Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~ 37 (140)
T 3i7m_A 1 GHMT-KLEQIQQWTAQHHASMTYLSNPKTIEYLTGFGS 37 (140)
T ss_dssp ---C-HHHHHHHHHHHTTCSEEEECCHHHHHHHHCCCC
T ss_pred Ccch-HHHHHHHHHHHcCCCEEEECCCCcceeecCCCC
Confidence 4788 99999999999998655555432 347777765
No 228
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=59.74 E-value=11 Score=36.90 Aligned_cols=97 Identities=23% Similarity=0.363 Sum_probs=58.1
Q ss_pred hcCCC-CCCCccccCCCCCChHHHHHHHHhchhcCCceEEec-----CCCc----------hHHHHHHHHhhCCCCeEEE
Q 014237 309 LDSNP-RFGDKKTYQMNPANYREALVEAQADESEGADILLVK-----PGLP----------YLDVIRLLRDKYPLPIAAY 372 (428)
Q Consensus 309 a~Sap-~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-----Pal~----------YLDII~~vk~~~~lPvaaY 372 (428)
++-+| +|-|-..|+ +.++|+..+..=+++|||||=|= |+.. .+-+|+.+++. ++|+..
T Consensus 35 lNvTPDSFsdgg~~~----~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~-~vpiSI- 108 (294)
T 2dqw_A 35 LNLTPDSFSDGGRYL----DPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL-GVPVSV- 108 (294)
T ss_dssp EECCC-----------------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT-CSCEEE-
T ss_pred EeCCCCCCCCCCCCC----CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC-CCeEEE-
Confidence 45566 476666563 55778888888999999999774 5533 46788888876 889865
Q ss_pred EechHHHHHHHHHHCC--CCch-----hhHHHHHHHHHHHhcccEeehhc
Q 014237 373 QVSGEYSMIKAGGALK--MIDE-----QRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 373 qVSGEYaMIkaAa~~G--~iD~-----~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
=|=....+++|.++| +|+. +. |.+.-.++.||-+|+...
T Consensus 109 -DT~~~~Va~aAl~aGa~iINdVsg~~d~---~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 109 -DTRKPEVAEEALKLGAHLLNDVTGLRDE---RMVALAARHGVAAVVMHM 154 (294)
T ss_dssp -ECSCHHHHHHHHHHTCSEEECSSCSCCH---HHHHHHHHHTCEEEEECC
T ss_pred -ECCCHHHHHHHHHhCCCEEEECCCCCCh---HHHHHHHHhCCCEEEEcC
Confidence 344556777877776 3432 22 344456788999998665
No 229
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=59.68 E-value=14 Score=35.82 Aligned_cols=109 Identities=20% Similarity=0.258 Sum_probs=72.6
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccchh
Q 014237 235 EDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFR 306 (428)
Q Consensus 235 ~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFR 306 (428)
+||.||- +.++.|+ --+.++|+|-+.+.+. .+=|...++.+.+..+ .+++|+.-..
T Consensus 25 ~dg~iD~-~~l~~lv---~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg----------- 88 (318)
T 3qfe_A 25 KTDTLDL-ASQERYY---AYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVG-PDFPIMAGVG----------- 88 (318)
T ss_dssp TTTEECH-HHHHHHH---HHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHC-TTSCEEEECC-----------
T ss_pred CCCCCCH-HHHHHHH---HHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC-----------
Confidence 5677773 3344443 3566789998776553 3456777777777664 4777775421
Q ss_pred hhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch---H------HHHHHHHhhCCCCeEEEEechH
Q 014237 307 EALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY---L------DVIRLLRDKYPLPIAAYQVSGE 377 (428)
Q Consensus 307 dAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y---L------DII~~vk~~~~lPvaaYqVSGE 377 (428)
+ .|.+|+++.+..=.+-|||-+||=|-..| + +=.+.+.+.+++|+..||+-|-
T Consensus 89 ----~--------------~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~ 150 (318)
T 3qfe_A 89 ----A--------------HSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGV 150 (318)
T ss_dssp ----C--------------SSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC-
T ss_pred ----C--------------CCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcc
Confidence 1 16688888777766789999999776444 2 2234677888999999999653
No 230
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=59.62 E-value=45 Score=30.45 Aligned_cols=125 Identities=14% Similarity=0.066 Sum_probs=71.9
Q ss_pred CCCCCCchHHHHHHHHHHCCCC-CceeechhhhhccccccchhhhhcCCCCCCCccccCCC--CCChHHHHHHHHhchhc
Q 014237 265 PSDMMDGRVGAIRAALDAEGFQ-HVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMN--PANYREALVEAQADESE 341 (428)
Q Consensus 265 PSDMMDGRV~aIR~aLD~~Gf~-~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmd--paN~~EAlrE~~lDi~E 341 (428)
+...-.|-+..+-+.|.+.|.. +|.|.|+....- --+|.. .|.+ +..|-.+ +.+..+.+++ -
T Consensus 123 ~~~~~~~~~~~v~~~l~~~~~~~~vii~SF~~~~l----~~~~~~---~p~~--~~~~l~~~~~~~~~~~~~~------~ 187 (252)
T 2pz0_A 123 GIVLYPGIEEKLIKAIKEYNFEERVIISSFNHYSL----RDVKKM---APHL--KIGLLYQCGLVEPWHMALR------M 187 (252)
T ss_dssp SSCCCTTHHHHHHHHHHHTTCTTTEEEEESBHHHH----HHHHHH---CTTS--EEEEEECSBCSSTHHHHHH------T
T ss_pred CCcccHHHHHHHHHHHHhcCCCCCEEEEeCCHHHH----HHHHHH---CCCC--CEEEEecCccccHHHHHHH------c
Confidence 3333457778899999998884 466666644211 112222 2321 1111111 1122222222 3
Q ss_pred CCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhcHHHHHH
Q 014237 342 GADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAAR 421 (428)
Q Consensus 342 GADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYfA~e~a~ 421 (428)
|+|.+-+.-.+.--+.|+.+++ .+++|.+|-| |.+ |.+..+.+.|+|.|||-+-..+.+
T Consensus 188 ~~~~i~~~~~~~~~~~v~~~~~-~G~~v~~wTv----------------n~~----~~~~~l~~~GvdgIiTD~P~~~~~ 246 (252)
T 2pz0_A 188 EAYSLHPFYFNIIPELVEGCKK-NGVKLFPWTV----------------DRK----EDMERMIKAGVDGIITDDPETLIN 246 (252)
T ss_dssp TCSEEEEBGGGCCHHHHHHHHH-TTCEECCBCC----------------CSH----HHHHHHHHHTCSEEEESCHHHHHH
T ss_pred CCeEEecchhcCCHHHHHHHHH-CCCEEEEECC----------------CCH----HHHHHHHHcCCCEEEcCCHHHHHH
Confidence 6887765433333467777776 5799999987 332 334556778999999999888878
Q ss_pred HHhc
Q 014237 422 CLCG 425 (428)
Q Consensus 422 wL~~ 425 (428)
+|++
T Consensus 247 ~l~~ 250 (252)
T 2pz0_A 247 LVRK 250 (252)
T ss_dssp HHC-
T ss_pred HHhh
Confidence 8763
No 231
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=59.55 E-value=98 Score=27.67 Aligned_cols=27 Identities=11% Similarity=0.249 Sum_probs=21.3
Q ss_pred HCCCCchhhHHHHHHHHHHH-hcccEee
Q 014237 386 ALKMIDEQRVMMESLMCLRR-AGADIIL 412 (428)
Q Consensus 386 ~~G~iD~~~~vlEsL~~~kR-AGAd~Ii 412 (428)
+.|.++.++.+.|.+..+++ .|||.||
T Consensus 163 ~~g~~~~~~~l~~~~~~l~~~~g~d~ii 190 (226)
T 2zsk_A 163 AFGNLKNKEWIVRLIEKYRESEGIEGVI 190 (226)
T ss_dssp GGTCCTTHHHHHHHHHHHHHHSCCSEEE
T ss_pred HcCchhHHHHHHHHHHHHHhhcCCCEEE
Confidence 35666445788889989988 8999998
No 232
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=59.45 E-value=21 Score=35.01 Aligned_cols=97 Identities=19% Similarity=0.266 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeec---------CC--CCCCCcccCcCcCCCCCHHHHHHHHHHHCC-CeEEEeeecccCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPK---------VP--DALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYS 225 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgv---------i~--~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P-dl~VitDVcLc~YT 225 (428)
...+.++.+.+.|...|-|-+- =| +...|+.|-.--|.--++...|++++++++ |..|..-+..++|.
T Consensus 159 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~ 238 (363)
T 3l5l_A 159 DFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYD 238 (363)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcC
Confidence 4667777888999999999762 02 234566665432322356678999999986 77788777766552
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 014237 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (428)
Q Consensus 226 shGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSD 267 (428)
. +| +.|++...+.+-.+.++|+|.|--|.
T Consensus 239 ~---------~G----~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 239 G---------RD----EQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp S---------CH----HHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred C---------CC----CCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 2 12 13455566667777899999997664
No 233
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=59.43 E-value=34 Score=26.27 Aligned_cols=62 Identities=16% Similarity=0.161 Sum_probs=41.8
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... ++..|+|++= |++.-+++++.+|+.. .+|+...--..+-.....+.+.|..|
T Consensus 34 ~~~~a~~~~~---~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~ 99 (134)
T 3f6c_A 34 EGGSAVQRVE---TLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANG 99 (134)
T ss_dssp SSTTHHHHHH---HHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSE
T ss_pred CHHHHHHHHH---hcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCE
Confidence 4455655544 3468999986 6667799999999887 58988876666555666666666543
No 234
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=59.29 E-value=17 Score=34.49 Aligned_cols=106 Identities=16% Similarity=0.192 Sum_probs=65.8
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.||- +.++.|++ -+.++|+|-+.+.+. .+=|...++.+.+..+= |++=
T Consensus 12 ~~dg~iD~-~~l~~lv~---~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g----viaG------------ 71 (293)
T 1w3i_A 12 TKDNRIDK-EKLKIHAE---NLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK----IIFQ------------ 71 (293)
T ss_dssp CTTSSBCH-HHHHHHHH---HHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC----EEEE------------
T ss_pred CCCCCcCH-HHHHHHHH---HHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC----EEEe------------
Confidence 35677763 33444443 456789997776543 22366666666655431 2211
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch--------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY--------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y--------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+++ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 72 ---vg~--------------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 133 (293)
T 1w3i_A 72 ---VGG--------------LNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPT 133 (293)
T ss_dssp ---CCC--------------SCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred ---cCC--------------CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECch
Confidence 111 26789888887777789999998554322 2233467788899999999643
No 235
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=59.19 E-value=37 Score=29.00 Aligned_cols=77 Identities=26% Similarity=0.330 Sum_probs=55.8
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCch------hhHHH
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDE------QRVMM 397 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~------~~~vl 397 (428)
|..||+.... +...|+|++= |++.-+++++.+++...+|+....-..+......|.+.|..|. .+.+.
T Consensus 36 ~~~~al~~~~---~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~ 112 (230)
T 2oqr_A 36 DGPAALAEFD---RAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELI 112 (230)
T ss_dssp SHHHHHHHHH---HHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCHHHHHHHHHHHHCCSCCCCSSCCHHHHH
T ss_pred CHHHHHHHHh---ccCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCCcHHHHHHHHHcCCCEEEeCCCCHHHHH
Confidence 5667766554 2357999875 6667799999999987899999988888888888877776442 24556
Q ss_pred HHHHHHHHh
Q 014237 398 ESLMCLRRA 406 (428)
Q Consensus 398 EsL~~~kRA 406 (428)
+.+..+.+-
T Consensus 113 ~~i~~~~~~ 121 (230)
T 2oqr_A 113 ARIRAVLRR 121 (230)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 666655543
No 236
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=59.09 E-value=27 Score=33.72 Aligned_cols=94 Identities=18% Similarity=0.266 Sum_probs=60.9
Q ss_pred HHHHHHHHHHcCCCeEEEeecC---------C--CCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCC
Q 014237 159 LVQEVAKARDVGVNSVVLFPKV---------P--DALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSD 227 (428)
Q Consensus 159 l~~~v~~~~~~GI~sv~LFgvi---------~--~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTsh 227 (428)
..+.++.+.+.|...|-|-+-= | +...|+.|..--|.--++.+.+++++++. +.-|...+..+.|..
T Consensus 146 ~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~- 223 (338)
T 1z41_A 146 FKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTD- 223 (338)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCST-
T ss_pred HHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCC-
Confidence 5666777889999999986521 2 22456666543333345678899999998 778888888776632
Q ss_pred CcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 014237 228 GHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (428)
Q Consensus 228 GHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSD 267 (428)
. | .+-++ ..+.|-...++|+|.|-=|+
T Consensus 224 --~------g-~~~~~----~~~~a~~l~~~Gvd~i~v~~ 250 (338)
T 1z41_A 224 --K------G-LDIAD----HIGFAKWMKEQGVDLIDCSS 250 (338)
T ss_dssp --T------S-CCHHH----HHHHHHHHHHTTCCEEEEEC
T ss_pred --C------C-CCHHH----HHHHHHHHHHcCCCEEEEec
Confidence 1 2 12222 33445556789999997654
No 237
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=59.08 E-value=5.2 Score=37.08 Aligned_cols=44 Identities=16% Similarity=0.118 Sum_probs=30.9
Q ss_pred ccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhh
Q 014237 318 KKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDK 364 (428)
Q Consensus 318 RktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~ 364 (428)
+..-=+|+.|.+|+++.++. ....+|+ +|+++.+ .++|+.+|+.
T Consensus 16 ~~ilalD~~~l~~~~~~~~~-~~~~v~~--~Kv~~d~~~~~G~~~v~~lr~~ 64 (245)
T 1eix_A 16 PVVVALDYHNRDDALAFVDK-IDPRDCR--LKVGKEMFTLFGPQFVRELQQR 64 (245)
T ss_dssp CEEEEECCSSHHHHHHHHTT-SCTTTCE--EEEEHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEECCCCHHHHHHHHHH-hCccCcE--EEEcHHHHHHhCHHHHHHHHHC
Confidence 34455889999998876642 2233666 8998876 5788888886
No 238
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=59.08 E-value=18 Score=33.23 Aligned_cols=122 Identities=11% Similarity=0.134 Sum_probs=70.3
Q ss_pred CchHHHHHHHHHHCCC-CCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCC-----ChHHHHHHHHhchhcCC
Q 014237 270 DGRVGAIRAALDAEGF-QHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPA-----NYREALVEAQADESEGA 343 (428)
Q Consensus 270 DGRV~aIR~aLD~~Gf-~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpa-----N~~EAlrE~~lDi~EGA 343 (428)
.+-+..+-+.|.+.|+ .++.|.||....- --+|+. .|.. + ++.+... +..+ +.+.. -.-|+
T Consensus 116 ~~~~~~v~~~l~~~~~~~~v~~~SF~~~~l----~~~~~~---~p~~--~-~~l~~~~~~~~~~~~~-~~~~~--~~~~~ 182 (250)
T 3ks6_A 116 EGFVALVIAGLERHSMLERTTFSSFLLASM----DELWKA---TTRP--R-LWLVSPSVLQQLGPGA-VIETA--IAHSI 182 (250)
T ss_dssp TTHHHHHHHHHHHTTCGGGEEEEESCHHHH----HHHHHH---CCSC--E-EEEECHHHHHHHHHHH-HHHHH--HHTTC
T ss_pred hHHHHHHHHHHHhcCCCCCEEEEeCCHHHH----HHHHHH---CCCC--c-EEEEecccccccchhH-HHHHH--HhcCC
Confidence 3667778888888887 4466666643321 122332 2321 1 1111110 0011 11111 23578
Q ss_pred ceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhcHHHHHHHH
Q 014237 344 DILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCL 423 (428)
Q Consensus 344 DilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYfA~e~a~wL 423 (428)
|.+-..-...--+.|+.+++ .+++|.+|-| |.. |.+..+...|+|.|||-+-..+.+++
T Consensus 183 ~~~~~~~~~~~~~~v~~~~~-~G~~V~~WTv----------------n~~----~~~~~l~~~GVDgIiTD~P~~~~~~~ 241 (250)
T 3ks6_A 183 HEIGVHIDTADAGLMAQVQA-AGLDFGCWAA----------------HTP----SQITKALDLGVKVFTTDRPTLAIALR 241 (250)
T ss_dssp CEEEEEGGGCCHHHHHHHHH-TTCEEEEECC----------------CSH----HHHHHHHHHTCSEEEESCHHHHHHHH
T ss_pred CEEecchhhCCHHHHHHHHH-CCCEEEEEeC----------------CCH----HHHHHHHHcCCCEEEcCCHHHHHHHH
Confidence 87765443334577888775 5899999977 332 34556677899999999988888887
Q ss_pred hc
Q 014237 424 CG 425 (428)
Q Consensus 424 ~~ 425 (428)
++
T Consensus 242 ~~ 243 (250)
T 3ks6_A 242 TE 243 (250)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 239
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=58.77 E-value=31 Score=26.63 Aligned_cols=62 Identities=16% Similarity=0.125 Sum_probs=42.9
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh--CCCCeEEEEechHHHHHHHHHHCCCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK--YPLPIAAYQVSGEYSMIKAGGALKMI 390 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~--~~lPvaaYqVSGEYaMIkaAa~~G~i 390 (428)
|..+|+..... ....|+|++- |++.-+++++.+++. ..+|+...--..+...+..+.+.|..
T Consensus 39 ~~~~a~~~~~~--~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~ 105 (136)
T 3hdv_A 39 GAEEARLYLHY--QKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVV 105 (136)
T ss_dssp SHHHHHHHHHH--CTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHh--CCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcc
Confidence 55666665542 2237899886 666779999999987 36899988766666666666666643
No 240
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=58.63 E-value=40 Score=25.87 Aligned_cols=63 Identities=22% Similarity=0.215 Sum_probs=46.3
Q ss_pred CChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh-C-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 326 ANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK-Y-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~-~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
.|..||+.... ++..|+|++= |++.-+|+++.+++. . ..|+....-+++......+.+.|..|
T Consensus 35 ~~~~~a~~~~~---~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~ 102 (130)
T 1dz3_A 35 YNGQDCLQMLE---EKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASY 102 (130)
T ss_dssp SSHHHHHHHHH---HHCCSEEEEESCCSSSCHHHHHHHHHHHCSSCCEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHh---cCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCcEEEEecCCCHHHHHHHHHcCCCE
Confidence 47788877664 2457999876 666778999999986 3 57888887777777777777777644
No 241
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=58.60 E-value=1.7e+02 Score=30.09 Aligned_cols=173 Identities=18% Similarity=0.195 Sum_probs=91.5
Q ss_pred CCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEE--ee-ecccCC
Q 014237 148 PGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIY--TD-VALDPY 224 (428)
Q Consensus 148 PGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vi--tD-VcLc~Y 224 (428)
+|..+++.+ +.++.++.+.++|+.++=.-+ |.. -|.. --..+++ -...++.|++..|+..+. +. ..++-|
T Consensus 22 ~~~~~~~~~-dkl~Ia~~L~~~Gv~~IE~g~--~at-F~~~-~r~~~~d--~~e~l~~i~~~~~~~~l~~l~R~~N~~G~ 94 (464)
T 2nx9_A 22 LFATRLRID-DMLPIAQQLDQIGYWSLECWG--GAT-FDSC-IRFLGED--PWQRLRLLKQAMPNTPLQMLLRGQNLLGY 94 (464)
T ss_dssp HSTTCCCGG-GTGGGHHHHHTSCCSEEEEEE--TTH-HHHH-HHTTCCC--HHHHHHHHHHHCSSSCEEEEECGGGTTSS
T ss_pred CCCcCCCHH-HHHHHHHHHHHcCCCEEEeCc--Ccc-ccch-hhccCCC--HHHHHHHHHHhCCCCeEEEEeccccccCc
Confidence 445566775 478888999999999998843 210 0000 0001121 135788888888874443 32 134455
Q ss_pred CCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecC----CCCCCchHHHHHHHHHHCCCCCceeechhhhhccc
Q 014237 225 SSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSP----SDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASS 300 (428)
Q Consensus 225 TshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAP----SDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASa 300 (428)
+.. .+ .+ .+..++.. +++|+|+|.- ||. +.-..+| +.+.+.|..-..-++|.
T Consensus 95 ~~~-------~d-dv-~~~~v~~a-------~~~Gvd~i~if~~~sd~-~ni~~~i-~~ak~~G~~v~~~i~~~------ 150 (464)
T 2nx9_A 95 RHY-------AD-DV-VDTFVERA-------VKNGMDVFRVFDAMNDV-RNMQQAL-QAVKKMGAHAQGTLCYT------ 150 (464)
T ss_dssp SCC-------CH-HH-HHHHHHHH-------HHTTCCEEEECCTTCCT-HHHHHHH-HHHHHTTCEEEEEEECC------
T ss_pred ccc-------cc-hh-hHHHHHHH-------HhCCcCEEEEEEecCHH-HHHHHHH-HHHHHCCCEEEEEEEee------
Confidence 310 10 11 23344332 3679998763 343 2222233 33345665211111331
Q ss_pred cccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEec-------CCCchHHHHHHHHhhCCCCeEEEE
Q 014237 301 FYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVK-------PGLPYLDVIRLLRDKYPLPIAAYQ 373 (428)
Q Consensus 301 fYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-------Pal~YLDII~~vk~~~~lPvaaYq 373 (428)
.|+ +.+.+..+.-+..=++-|||.|-+| |. ..-++|+.+|+++++|+. +|
T Consensus 151 -~~~--------------------~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~-~v~~lv~~l~~~~~~~i~-~H 207 (464)
T 2nx9_A 151 -TSP--------------------VHNLQTWVDVAQQLAELGVDSIALKDMAGILTPY-AAEELVSTLKKQVDVELH-LH 207 (464)
T ss_dssp -CCT--------------------TCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHH-HHHHHHHHHHHHCCSCEE-EE
T ss_pred -eCC--------------------CCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHH-HHHHHHHHHHHhcCCeEE-EE
Confidence 121 1244444444443356799999887 43 246899999999999875 44
Q ss_pred e
Q 014237 374 V 374 (428)
Q Consensus 374 V 374 (428)
-
T Consensus 208 ~ 208 (464)
T 2nx9_A 208 C 208 (464)
T ss_dssp E
T ss_pred E
Confidence 3
No 242
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=58.48 E-value=6.3 Score=36.50 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=30.0
Q ss_pred ccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhh
Q 014237 320 TYQMNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDK 364 (428)
Q Consensus 320 tYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~ 364 (428)
---+|+.|.+|+++.++. . |..+.++|+++.+ .++|+.+|+.
T Consensus 8 ilalD~~~l~~~~~~v~~-~--~~~v~~~Kv~~d~~~~~G~~~v~~lr~~ 54 (246)
T 2yyu_A 8 IVALDFPSKQEVERFLRP-F--AGTPLFVKVGMELYYQEGPAIVAFLKEQ 54 (246)
T ss_dssp EEECCCSSHHHHHHHHGG-G--TTSCCEEEECHHHHHHHTHHHHHHHHHT
T ss_pred EEEeCCCCHHHHHHHHHH-h--cccccEEEeCHHHHHHhCHHHHHHHHHC
Confidence 345788999998877642 2 4334559999876 5788888886
No 243
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=58.42 E-value=18 Score=37.28 Aligned_cols=61 Identities=26% Similarity=0.396 Sum_probs=42.3
Q ss_pred HHHHHhchhcCCceEEecCCC----chHHHHHHHHhhCC-CCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHh
Q 014237 332 LVEAQADESEGADILLVKPGL----PYLDVIRLLRDKYP-LPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRA 406 (428)
Q Consensus 332 lrE~~lDi~EGADilMVKPal----~YLDII~~vk~~~~-lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRA 406 (428)
+..+..=++.|+|+|.|=-+. ..+|.|+++|++++ +|+.+-+|. + .|....+..+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~---------------t-----~e~a~~~~~a 317 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVA---------------T-----AEATKALIEA 317 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEEC---------------S-----HHHHHHHHHH
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeec---------------c-----HHHHHHHHHh
Confidence 344433367899999995433 35799999999995 899986663 1 2334455667
Q ss_pred cccEee
Q 014237 407 GADIIL 412 (428)
Q Consensus 407 GAd~Ii 412 (428)
|||.|+
T Consensus 318 Gad~i~ 323 (511)
T 3usb_A 318 GANVVK 323 (511)
T ss_dssp TCSEEE
T ss_pred CCCEEE
Confidence 888885
No 244
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=58.25 E-value=30 Score=27.53 Aligned_cols=51 Identities=22% Similarity=0.239 Sum_probs=40.8
Q ss_pred cCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 341 EGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 341 EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
...|+|++= |++.-+++++.+++.. .+|+..+--+.+-..+..+.+.|..|
T Consensus 46 ~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~ 100 (155)
T 1qkk_A 46 DFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYD 100 (155)
T ss_dssp TCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCChHHHHHHHhcCCCe
Confidence 357888875 6667789999999887 69999998877777778888888754
No 245
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=58.00 E-value=28 Score=30.67 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=26.8
Q ss_pred HHHHHHhc-hhcCCceEEecCCCchHHHHHHHHhhCCCCeE
Q 014237 331 ALVEAQAD-ESEGADILLVKPGLPYLDVIRLLRDKYPLPIA 370 (428)
Q Consensus 331 AlrE~~lD-i~EGADilMVKPal~YLDII~~vk~~~~lPva 370 (428)
-..+...- .+.|++.+.+. -.+.|+.+|+.+++|+.
T Consensus 24 ~~~~~a~~~~~~Ga~~i~~~----~~~~i~~i~~~~~~pv~ 60 (223)
T 1y0e_A 24 IMSKMALAAYEGGAVGIRAN----TKEDILAIKETVDLPVI 60 (223)
T ss_dssp HHHHHHHHHHHHTCSEEEEE----SHHHHHHHHHHCCSCEE
T ss_pred cHHHHHHHHHHCCCeeeccC----CHHHHHHHHHhcCCCEE
Confidence 33444333 46799999874 46999999999999985
No 246
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=57.90 E-value=59 Score=25.70 Aligned_cols=63 Identities=17% Similarity=0.164 Sum_probs=40.4
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+..... ....|+|++= |++.-+++++.+++.+ .+|+...--+.+-..+..+.+.|..+
T Consensus 37 ~~~~a~~~l~~--~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~ 103 (154)
T 2qsj_A 37 TVSDALAFLEA--DNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADG 103 (154)
T ss_dssp SHHHHHHHHHT--TCCCSEEEECC------CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCB
T ss_pred CHHHHHHHHhc--cCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCCE
Confidence 66777766653 1457999886 5556789999999987 58999877666666777777777654
No 247
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=57.78 E-value=50 Score=31.22 Aligned_cols=79 Identities=13% Similarity=0.169 Sum_probs=50.0
Q ss_pred cccCCCCCChHHHHHHHHhchhcCCceEEecCCCc------------------hHHHHHHHHhhCCCCeEEE---EechH
Q 014237 319 KTYQMNPANYREALVEAQADESEGADILLVKPGLP------------------YLDVIRLLRDKYPLPIAAY---QVSGE 377 (428)
Q Consensus 319 ktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~------------------YLDII~~vk~~~~lPvaaY---qVSGE 377 (428)
..|++-..|.++.-+. ++-|+|.|.|=-+.. ..++|+.+|+ ..++|-+| .+|.|
T Consensus 74 ~~~~~l~~~~~~i~~a----~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~-~G~~v~~~l~~~~~~~ 148 (298)
T 2cw6_A 74 INYPVLTPNLKGFEAA----VAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQS-ANISVRGYVSCALGCP 148 (298)
T ss_dssp CBCCEECCSHHHHHHH----HHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHH-TTCEEEEEEETTTCBT
T ss_pred CEEEEEcCCHHhHHHH----HHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEEEeeCC
Confidence 3566655665542222 346999988744433 2345666665 46677544 46677
Q ss_pred HHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEe
Q 014237 378 YSMIKAGGALKMIDEQRVMMESLMCLRRAGADII 411 (428)
Q Consensus 378 YaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~I 411 (428)
| .|..|. +.++|....+..+|||.|
T Consensus 149 ~--------~~~~~~-~~~~~~~~~~~~~Ga~~i 173 (298)
T 2cw6_A 149 Y--------EGKISP-AKVAEVTKKFYSMGCYEI 173 (298)
T ss_dssp T--------TBSCCH-HHHHHHHHHHHHTTCSEE
T ss_pred c--------CCCCCH-HHHHHHHHHHHHcCCCEE
Confidence 6 344565 477899999999999986
No 248
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=57.75 E-value=49 Score=26.30 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=46.6
Q ss_pred ChHHHHHHHHhch----hcCCceEEec---CCCchHHHHHHHHhhC---CCCeEEEEechHHHHHHHHHHCCCCch
Q 014237 327 NYREALVEAQADE----SEGADILLVK---PGLPYLDVIRLLRDKY---PLPIAAYQVSGEYSMIKAGGALKMIDE 392 (428)
Q Consensus 327 N~~EAlrE~~lDi----~EGADilMVK---Pal~YLDII~~vk~~~---~lPvaaYqVSGEYaMIkaAa~~G~iD~ 392 (428)
|..||+....... ++..|+|++= |++.=+|+++.+++.. .+|+...--+++-..+..+.+.|..|.
T Consensus 42 ~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~ 117 (149)
T 1i3c_A 42 DGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCY 117 (149)
T ss_dssp SHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEE
Confidence 5667776654321 1357999886 6666789999999863 589999877776667777777777553
No 249
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=57.68 E-value=18 Score=33.94 Aligned_cols=63 Identities=29% Similarity=0.338 Sum_probs=42.1
Q ss_pred CChHHHHHHHHhchhcCCceEEecC--------CC--chHHHHHHHHhh--CCCCeEEEEechHHHHHHHHHHCCCCchh
Q 014237 326 ANYREALVEAQADESEGADILLVKP--------GL--PYLDVIRLLRDK--YPLPIAAYQVSGEYSMIKAGGALKMIDEQ 393 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVKP--------al--~YLDII~~vk~~--~~lPvaaYqVSGEYaMIkaAa~~G~iD~~ 393 (428)
.|..|+.+.. +.|||+|.+=| .. .=+|.++++++. .++|+.| -|-|+.+
T Consensus 143 ht~~Ea~~A~----~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvA---------------iGGI~~~ 203 (243)
T 3o63_A 143 HDPDQVAAAA----AGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFA---------------IGGINAQ 203 (243)
T ss_dssp CSHHHHHHHH----HSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEE---------------ESSCCTT
T ss_pred CCHHHHHHHh----hCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEE---------------ecCCCHH
Confidence 4666754432 47999999943 31 237889999987 4799876 3445654
Q ss_pred hHHHHHHHHHHHhcccEee
Q 014237 394 RVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 394 ~~vlEsL~~~kRAGAd~Ii 412 (428)
.+..++++|||.|.
T Consensus 204 -----ni~~~~~aGa~gva 217 (243)
T 3o63_A 204 -----RLPAVLDAGARRIV 217 (243)
T ss_dssp -----THHHHHHTTCCCEE
T ss_pred -----HHHHHHHcCCCEEE
Confidence 34567889999875
No 250
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=57.58 E-value=1e+02 Score=27.26 Aligned_cols=142 Identities=18% Similarity=0.137 Sum_probs=74.4
Q ss_pred HHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHH
Q 014237 202 TIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALD 281 (428)
Q Consensus 202 AIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD 281 (428)
.|+.||+.+ +..|+.|+-|. |--.|.+..++. ++++|||+|.=+--+.-. .|+.+.+
T Consensus 42 ~i~~lr~~~-~~~v~~D~kl~-----------------DI~~t~~~~v~~---~~~~Gad~vtvh~~~g~~--~i~~~~~ 98 (208)
T 2czd_A 42 IIRRLKEET-GVEIIADLKLA-----------------DIPNTNRLIARK---VFGAGADYVIVHTFVGRD--SVMAVKE 98 (208)
T ss_dssp HHHHHHHHH-CCEEEEEEEEC-----------------SCHHHHHHHHHH---HHHTTCSEEEEESTTCHH--HHHHHHT
T ss_pred HHHHHHHcC-CCEEEEEeeeC-----------------chHHHHHHHHHH---HHhcCCCEEEEeccCCHH--HHHHHHH
Confidence 566777776 67788888663 223344554444 457999998544433211 2444432
Q ss_pred HCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHH
Q 014237 282 AEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLL 361 (428)
Q Consensus 282 ~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~v 361 (428)
.| .+.++.-.. ..+. + .| . ....... +.+=.+-|+|.+-+-|.. ++-++++
T Consensus 99 -~~--gv~vl~~t~---------~~~~---------~-~~-~-~~~v~~~---~~~a~~~G~~G~~~~~~~--~~~i~~l 149 (208)
T 2czd_A 99 -LG--EIIMVVEMS---------HPGA---------L-EF-I-NPLTDRF---IEVANEIEPFGVIAPGTR--PERIGYI 149 (208)
T ss_dssp -TS--EEEEECCCC---------SGGG---------G-TT-T-GGGHHHH---HHHHHHHCCSEEECCCSS--THHHHHH
T ss_pred -hC--CcEEEEecC---------Ccch---------h-hH-H-HHHHHHH---HHHHHHhCCcEEEECCCC--hHHHHHH
Confidence 23 444442210 0000 0 01 1 1122222 233356799998777764 6778888
Q ss_pred HhhCCC-CeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 362 RDKYPL-PIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 362 k~~~~l-PvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
|+..+. ++ . |.| -+..+.. ......++|||+|+.
T Consensus 150 r~~~~~~~~--i-v~g------------GI~~~g~---~~~~~~~aGad~vvv 184 (208)
T 2czd_A 150 RDRLKEGIK--I-LAP------------GIGAQGG---KAKDAVKAGADYIIV 184 (208)
T ss_dssp HHHSCTTCE--E-EEC------------CCCSSTT---HHHHHHHHTCSEEEE
T ss_pred HHhCCCCeE--E-EEC------------CCCCCCC---CHHHHHHcCCCEEEE
Confidence 888753 32 2 554 2332210 134456889998873
No 251
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=57.18 E-value=18 Score=34.29 Aligned_cols=104 Identities=23% Similarity=0.269 Sum_probs=65.9
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccchhh
Q 014237 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFRE 307 (428)
Q Consensus 236 ~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRd 307 (428)
||.|| -+.++.|++ -+.++|+|-+.+.+. .+=|...+|.+.+..+= |+.=
T Consensus 13 dg~iD-~~~l~~lv~---~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g----vi~G-------------- 70 (286)
T 2r91_A 13 GGRLD-PELFANHVK---NITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR----VIVQ-------------- 70 (286)
T ss_dssp TTEEC-HHHHHHHHH---HHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS----EEEE--------------
T ss_pred CCccC-HHHHHHHHH---HHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC----EEEe--------------
Confidence 56776 334444444 456789998876543 23477777777776531 3221
Q ss_pred hhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch--------HHHHHHHHhhCCCCeEEEEech
Q 014237 308 ALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY--------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 308 Aa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y--------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+++ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+++|+..||+-|
T Consensus 71 -vg~--------------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 132 (286)
T 2r91_A 71 -VAS--------------LNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPA 132 (286)
T ss_dssp -CCC--------------SSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred -eCC--------------CCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChh
Confidence 111 25788887777666779999999654322 2233467788899999999743
No 252
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=57.08 E-value=45 Score=34.15 Aligned_cols=46 Identities=22% Similarity=0.271 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEe
Q 014237 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (428)
Q Consensus 159 l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vit 217 (428)
..+.++.+++.|+..|.|-.. + | + ...+...|+.||+++|++.|+.
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a----~----g----~-~~~~~~~i~~ir~~~p~~~Vi~ 277 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSS----H----G----H-SEGVLQRIRETRAAYPHLEIIG 277 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECS----C----T----T-SHHHHHHHHHHHHHCTTCCEEE
T ss_pred hHHHHHHHHhccCceEEeccc----c----c----c-chHHHHHHHHHHHHCCCceEEE
Confidence 578899999999997766432 1 1 1 1235578999999999987776
No 253
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=57.06 E-value=16 Score=36.72 Aligned_cols=55 Identities=24% Similarity=0.506 Sum_probs=37.9
Q ss_pred hhcCCceEEe--cCCCc--hHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 339 ESEGADILLV--KPGLP--YLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 339 i~EGADilMV--KPal~--YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
++.|+|.|.+ --+.+ .+++|+.+|+.+ ++||.+= +..+. |....+..+|||.|..
T Consensus 246 ~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g---------------~~~t~-----e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 246 VKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG---------------NVATP-----EGTEALIKAGADAVKV 305 (494)
T ss_dssp HHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE---------------EECSH-----HHHHHHHHTTCSEEEE
T ss_pred HHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC---------------CcCCH-----HHHHHHHHcCCCEEEE
Confidence 6789999997 22333 789999999999 6998761 12222 2224556789999874
No 254
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=56.59 E-value=14 Score=35.62 Aligned_cols=108 Identities=12% Similarity=0.154 Sum_probs=73.1
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.||- +.++.|++ -+.++|+|-|.+.+. .+=|...++.+.+.. .+++|+.=.
T Consensus 21 ~~dg~iD~-~~l~~lv~---~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGv----------- 83 (313)
T 3dz1_A 21 HDDGKIDD-VSIDRLTD---FYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGV----------- 83 (313)
T ss_dssp CTTSCBCH-HHHHHHHH---HHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEEC-----------
T ss_pred CCCCCcCH-HHHHHHHH---HHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEec-----------
Confidence 35677773 34444443 456799998766542 345777888888777 488887532
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch------HHHHHHHHhhCC--CCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY------LDVIRLLRDKYP--LPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y------LDII~~vk~~~~--lPvaaYqVSG 376 (428)
++ .|.+|+++.+..=.+-|||.+||=|-..+ .+=.+.+.+.++ +|+..||+-|
T Consensus 84 ----g~--------------~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~ 144 (313)
T 3dz1_A 84 ----SA--------------PGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPL 144 (313)
T ss_dssp ----CC--------------SSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHH
T ss_pred ----CC--------------CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCcc
Confidence 11 15788888777666779999999665421 334556778888 9999999855
No 255
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=56.48 E-value=14 Score=35.99 Aligned_cols=49 Identities=20% Similarity=0.074 Sum_probs=35.1
Q ss_pred cCCCCCChHHHHHHHHhchhcCCceEEec----CC---------CchHHHHHHHHhhCCCCeEEEE
Q 014237 321 YQMNPANYREALVEAQADESEGADILLVK----PG---------LPYLDVIRLLRDKYPLPIAAYQ 373 (428)
Q Consensus 321 YQmdpaN~~EAlrE~~lDi~EGADilMVK----Pa---------l~YLDII~~vk~~~~lPvaaYq 373 (428)
--||..+.+.| +.. .+.|||-|||= .. +.-++.|+++++.+.+||.+..
T Consensus 24 v~~d~~~~e~A-~~y---e~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~ 85 (297)
T 4adt_A 24 VIMDVKNVEQA-KIA---EKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKV 85 (297)
T ss_dssp EEEEESSHHHH-HHH---HHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEE
T ss_pred cccCCCcHHHH-HHH---HHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEec
Confidence 34566666554 222 56899999997 11 1259999999999999999863
No 256
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=56.27 E-value=20 Score=36.61 Aligned_cols=54 Identities=19% Similarity=0.402 Sum_probs=39.5
Q ss_pred hhcCCceEEecCCC----chHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEee
Q 014237 339 ESEGADILLVKPGL----PYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 339 i~EGADilMVKPal----~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
++.|+|+|.+=-+. ..+|.|+++|+.+ ++|+.+-+|. + .|....+..||||.|+
T Consensus 238 ~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~---------------t-----~e~a~~l~~aGaD~I~ 296 (490)
T 4avf_A 238 VAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIA---------------T-----AEAAKALAEAGADAVK 296 (490)
T ss_dssp HHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEEC---------------S-----HHHHHHHHHTTCSEEE
T ss_pred hhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeC---------------c-----HHHHHHHHHcCCCEEE
Confidence 46799999874333 3479999999999 7999996552 1 1334567778899886
No 257
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=56.23 E-value=19 Score=34.68 Aligned_cols=107 Identities=15% Similarity=0.157 Sum_probs=71.9
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.|| -+.++.|++ -+.++|+|-+.+.+. .+=|...++.+.+..+ .+++|+.-..
T Consensus 21 ~~dg~iD-~~~l~~lv~---~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------- 85 (309)
T 3fkr_A 21 ADTGDLD-LASQKRAVD---FMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVA-GRVPVIVTTS---------- 85 (309)
T ss_dssp CTTSSBC-HHHHHHHHH---HHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC----------
T ss_pred CcCCCcC-HHHHHHHHH---HHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEecC----------
Confidence 3567776 444555554 456899997766542 3456777777777654 3677775421
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-----------HHHHHHHHhhCCCCeEEEEe
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY-----------LDVIRLLRDKYPLPIAAYQV 374 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----------LDII~~vk~~~~lPvaaYqV 374 (428)
+ .|.+|+++.+..=.+-|||-+||=|- .| .+=.+.+.+.+++|+..||+
T Consensus 86 -----~--------------~~t~~ai~la~~A~~~Gadavlv~~P-yy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~ 145 (309)
T 3fkr_A 86 -----H--------------YSTQVCAARSLRAQQLGAAMVMAMPP-YHGATFRVPEAQIFEFYARVSDAIAIPIMVQDA 145 (309)
T ss_dssp -----C--------------SSHHHHHHHHHHHHHTTCSEEEECCS-CBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred -----C--------------chHHHHHHHHHHHHHcCCCEEEEcCC-CCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 1 16788888777767789999999763 22 22345677888999999998
Q ss_pred c
Q 014237 375 S 375 (428)
Q Consensus 375 S 375 (428)
-
T Consensus 146 P 146 (309)
T 3fkr_A 146 P 146 (309)
T ss_dssp G
T ss_pred C
Confidence 4
No 258
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=55.85 E-value=21 Score=35.10 Aligned_cols=59 Identities=20% Similarity=0.255 Sum_probs=38.3
Q ss_pred HHHHhchhc--CCceEEec--CC--CchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHH
Q 014237 333 VEAQADESE--GADILLVK--PG--LPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRR 405 (428)
Q Consensus 333 rE~~lDi~E--GADilMVK--Pa--l~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kR 405 (428)
..+..-+++ |+|++-+= .+ ...+|.|+.+|+.+ ++||.+=.|. + .|......+
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~---------------t-----~e~A~~a~~ 180 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVV---------------T-----GEMVEELIL 180 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEEC---------------S-----HHHHHHHHH
T ss_pred HHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCC---------------C-----HHHHHHHHH
Confidence 334333455 99988763 11 23678999999999 7999865553 2 233345567
Q ss_pred hcccEe
Q 014237 406 AGADII 411 (428)
Q Consensus 406 AGAd~I 411 (428)
+|||+|
T Consensus 181 aGaD~I 186 (351)
T 2c6q_A 181 SGADII 186 (351)
T ss_dssp TTCSEE
T ss_pred hCCCEE
Confidence 788887
No 259
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=55.82 E-value=5.5 Score=38.29 Aligned_cols=87 Identities=15% Similarity=0.155 Sum_probs=51.9
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEe----------cCCCc---hHHHHHHHHhhCCCCeEEE
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLV----------KPGLP---YLDVIRLLRDKYPLPIAAY 372 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMV----------KPal~---YLDII~~vk~~~~lPvaaY 372 (428)
|+.....|.+|.+...|+...+.+++.+.++. -|+|.+.+ .|... ++++|+.+|+ .++||.+=
T Consensus 112 ~~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~---~~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~-~~~Pv~vK 187 (332)
T 1vcf_A 112 RKVAPKALLIANLGLAQLRRYGRDDLLRLVEM---LEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLP-LPFPVMVK 187 (332)
T ss_dssp TTTCSSSCEEEEEEGGGGGTCCHHHHHHHHHH---HTCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCS-CSSCEEEE
T ss_pred eccCCCceeecccChhhhhccChHHHHHHHhh---cCCCceeeccchHHHHhcCCCccHHHHHHHHHHHHc-CCCCEEEE
Confidence 44434466666666677755444554443321 14554422 34444 4899999999 99999974
Q ss_pred EechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 373 QVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 373 qVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
-|+ .|| .. |....+..+|+|.|+-
T Consensus 188 ~v~-----------~g~-~~-----e~a~~~~~~G~d~I~v 211 (332)
T 1vcf_A 188 EVG-----------HGL-SR-----EAALALRDLPLAAVDV 211 (332)
T ss_dssp CSS-----------SCC-CH-----HHHHHHTTSCCSEEEC
T ss_pred ecC-----------CCC-CH-----HHHHHHHHcCCCEEEe
Confidence 443 233 22 2234677889998853
No 260
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=55.62 E-value=28 Score=26.82 Aligned_cols=62 Identities=27% Similarity=0.322 Sum_probs=45.2
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... +...|+|++= |++.-+++++.+++.. .+|+....-+++......+.+.|..|
T Consensus 35 ~~~~a~~~~~---~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~ 100 (136)
T 1mvo_A 35 DGEEALKKAE---TEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADD 100 (136)
T ss_dssp SHHHHHHHHH---HHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCE
T ss_pred CHHHHHHHHh---hcCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHhCCCCE
Confidence 5566665543 2457999886 5666789999999875 68999988777777666677777654
No 261
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=55.59 E-value=33 Score=32.69 Aligned_cols=58 Identities=19% Similarity=0.217 Sum_probs=36.8
Q ss_pred hHHHHHHHHhh-CCCCeEE--E-Ee---chHHHHHHHHHHCCCC-----ch-hhHHHHHHHHHHHhcccEe
Q 014237 354 YLDVIRLLRDK-YPLPIAA--Y-QV---SGEYSMIKAGGALKMI-----DE-QRVMMESLMCLRRAGADII 411 (428)
Q Consensus 354 YLDII~~vk~~-~~lPvaa--Y-qV---SGEYaMIkaAa~~G~i-----D~-~~~vlEsL~~~kRAGAd~I 411 (428)
++|+|+++|++ .++|+.. | |- -|.-..++.++++|.= |+ -+-.-|....+++.|-+.|
T Consensus 82 ~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 82 CFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEE
Confidence 38999999998 7899876 3 32 2444556666666631 11 0124566677777887765
No 262
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=55.58 E-value=1.3e+02 Score=29.18 Aligned_cols=104 Identities=24% Similarity=0.221 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCc-----CcCCCCCHHHHHHHHHHHC--CCeEEEeeecccCCCCCCcc
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDE-----AYNDNGLVPRTIWLLKDRY--PDLVIYTDVALDPYSSDGHD 230 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~-----A~~~~g~v~rAIr~iK~~~--Pdl~VitDVcLc~YTshGHc 230 (428)
.+.+.++++.+.|+-+|.|=+-+.. +| +|-- ..-|-.-...-|++++++. ++..|++=. |.+. .|
T Consensus 95 ~v~~~v~~l~~aGaagv~iED~~~~-k~--cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRt--da~~-a~-- 166 (295)
T 1s2w_A 95 NARRLVRKLEDRGVAGACLEDKLFP-KT--NSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARV--EAFI-AG-- 166 (295)
T ss_dssp HHHHHHHHHHHTTCCEEEEECBCC-----------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEE--CTTT-TT--
T ss_pred HHHHHHHHHHHcCCcEEEECCCCCC-cc--ccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEee--hHHh-cc--
Confidence 5888999999999999999554211 11 2211 1112122234466666654 666666532 1110 01
Q ss_pred eeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC-CCC-chHHHHHHHHH
Q 014237 231 GIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD-MMD-GRVGAIRAALD 281 (428)
Q Consensus 231 Gil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSD-MMD-GRV~aIR~aLD 281 (428)
..++.+.+-|..|++||||+|-+-. +-| -.+..|.++|+
T Consensus 167 ------------~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 167 ------------WGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWN 207 (295)
T ss_dssp ------------CCHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHT
T ss_pred ------------ccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcC
Confidence 1267788889999999999998754 553 56778888885
No 263
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=55.51 E-value=9.8 Score=36.12 Aligned_cols=108 Identities=21% Similarity=0.309 Sum_probs=70.3
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC------C--CchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM------M--DGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM------M--DGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++|| || -+.++.|++ -+.++|+|-+.+.+. | +=|...++.+.+..+ .+++|+.=..
T Consensus 15 ~~dg-iD-~~~l~~lv~---~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pvi~Gvg---------- 78 (291)
T 3a5f_A 15 TNTG-VD-FDKLSELIE---WHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVN-KRIPVIAGTG---------- 78 (291)
T ss_dssp CSSS-BC-HHHHHHHHH---HHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC----------
T ss_pred CCCC-cC-HHHHHHHHH---HHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC----------
Confidence 3457 55 445555554 456789998876542 2 357888888887754 3677775321
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch----HHHH---HHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY----LDVI---RLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y----LDII---~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| =.++ +.+.+.+++|+..||+-|
T Consensus 79 -----~--------------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 137 (291)
T 3a5f_A 79 -----S--------------NNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPG 137 (291)
T ss_dssp -----C--------------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHH
T ss_pred -----c--------------ccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 1 25688887777666779999999654221 2333 356678899999999754
No 264
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=55.35 E-value=57 Score=25.87 Aligned_cols=62 Identities=21% Similarity=0.240 Sum_probs=43.2
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh-----CCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK-----YPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~-----~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... ++.-|+|++= |++.=+++++.+|+. ..+|+....-+++-..+..+.+.|..|
T Consensus 46 ~~~~al~~~~---~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~ 115 (143)
T 3m6m_D 46 GAEQVLDAMA---EEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARA 115 (143)
T ss_dssp SHHHHHHHHH---HSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCCCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHh---cCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCCCHHHHHHHHHcChhh
Confidence 4556665553 3568999986 777779999999853 248998887666666666666666544
No 265
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=55.26 E-value=29 Score=36.54 Aligned_cols=126 Identities=16% Similarity=0.070 Sum_probs=78.6
Q ss_pred CCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCC
Q 014237 147 MPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSS 226 (428)
Q Consensus 147 MPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTs 226 (428)
+.|.-.|.-+ -..+.++.+.+.|+..|-+|....+ . --+..+|+.+|+..- .+-+ ++|.-.+
T Consensus 108 ~~G~~~ypdd-v~~~~ve~a~~aGvd~vrIf~s~sd-~------------~ni~~~i~~ak~~G~--~v~~--~i~~~~~ 169 (539)
T 1rqb_A 108 LLGYRHYNDE-VVDRFVDKSAENGMDVFRVFDAMND-P------------RNMAHAMAAVKKAGK--HAQG--TICYTIS 169 (539)
T ss_dssp TTSSSCCCHH-HHHHHHHHHHHTTCCEEEECCTTCC-T------------HHHHHHHHHHHHTTC--EEEE--EEECCCS
T ss_pred ccCcccCccc-ccHHHHHHHHhCCCCEEEEEEehhH-H------------HHHHHHHHHHHHCCC--eEEE--EEEeeeC
Confidence 4455455432 3567889999999999999976432 1 125788999988753 2322 2321111
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc--------hHHHHHHHHH-H--CCC--CCceeech
Q 014237 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDG--------RVGAIRAALD-A--EGF--QHVSIMSY 293 (428)
Q Consensus 227 hGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDG--------RV~aIR~aLD-~--~Gf--~~v~IMSY 293 (428)
.. - +++.+.+.+-...++|||+|.-.||.=+ .|.++|+.+. . -|+ +|+.=|+.
T Consensus 170 ~~-----------~---~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAv 235 (539)
T 1rqb_A 170 PV-----------H---TVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTE 235 (539)
T ss_dssp TT-----------C---CHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHH
T ss_pred CC-----------C---CHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHH
Confidence 11 1 4666777777778899999999998753 5778888773 1 122 55555666
Q ss_pred hhhhccccccc
Q 014237 294 TAKYASSFYGP 304 (428)
Q Consensus 294 saKyASafYGP 304 (428)
|.=.+..-.|-
T Consensus 236 AN~laAveAGa 246 (539)
T 1rqb_A 236 VSLMKAIEAGV 246 (539)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhCC
Confidence 65555544443
No 266
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=55.15 E-value=27 Score=33.48 Aligned_cols=33 Identities=27% Similarity=0.540 Sum_probs=26.4
Q ss_pred hhcCCceEEecC---C-----CchHHHHHHHHhhCCCCeEE
Q 014237 339 ESEGADILLVKP---G-----LPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 339 i~EGADilMVKP---a-----l~YLDII~~vk~~~~lPvaa 371 (428)
.+.|+|+|.|-. + .+-+++++++++.+++||.+
T Consensus 127 ~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~iPVia 167 (332)
T 2z6i_A 127 EKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIA 167 (332)
T ss_dssp HHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEE
T ss_pred HHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcCCCEEE
Confidence 357999999943 1 35589999999999999875
No 267
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=55.13 E-value=36 Score=32.14 Aligned_cols=88 Identities=19% Similarity=0.232 Sum_probs=56.4
Q ss_pred cCCCCCChHHHHHHHHhchhcCCceEEec-------CCCch-HHHHHHHHhhC-CCCeEE-EEec--hHHHHHHHHHHCC
Q 014237 321 YQMNPANYREALVEAQADESEGADILLVK-------PGLPY-LDVIRLLRDKY-PLPIAA-YQVS--GEYSMIKAGGALK 388 (428)
Q Consensus 321 YQmdpaN~~EAlrE~~lDi~EGADilMVK-------Pal~Y-LDII~~vk~~~-~lPvaa-YqVS--GEYaMIkaAa~~G 388 (428)
.-.|..|-.|+++.+. +-|||.+=++ |.+.| .++|+.+|+.+ ++|+-+ --|. +.| ++.++++|
T Consensus 35 lsaD~~~L~~~i~~l~---~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~--i~~~~~aG 109 (246)
T 3inp_A 35 LSADLARLGDDVKAVL---AAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDAL--IESFAKAG 109 (246)
T ss_dssp GGSCGGGHHHHHHHHH---HTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHH--HHHHHHHT
T ss_pred hcCChhhHHHHHHHHH---HcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHH--HHHHHHcC
Confidence 3467788888888875 4689987663 44444 79999999999 899877 3333 334 45555555
Q ss_pred C--C----chhhHHHHHHHHHHHhcccEeeh
Q 014237 389 M--I----DEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 389 ~--i----D~~~~vlEsL~~~kRAGAd~IiT 413 (428)
. + .-..-+.+++..+|++|....++
T Consensus 110 Ad~itvH~Ea~~~~~~~i~~ir~~G~k~Gva 140 (246)
T 3inp_A 110 ATSIVFHPEASEHIDRSLQLIKSFGIQAGLA 140 (246)
T ss_dssp CSEEEECGGGCSCHHHHHHHHHTTTSEEEEE
T ss_pred CCEEEEccccchhHHHHHHHHHHcCCeEEEE
Confidence 2 1 00123566677777777665553
No 268
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=55.10 E-value=28 Score=27.18 Aligned_cols=51 Identities=12% Similarity=0.112 Sum_probs=36.9
Q ss_pred cCCceEEec---CC--CchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 341 EGADILLVK---PG--LPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 341 EGADilMVK---Pa--l~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
+.-|+|++- |+ +.-+++++.+|+.. .+|+....-..+......+.+.|..|
T Consensus 49 ~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~ 105 (136)
T 3kto_A 49 DDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSSDIPTAVRAMRASAAD 105 (136)
T ss_dssp TTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSE
T ss_pred cCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHH
Confidence 346888886 44 55589999999887 69999887666666666666666543
No 269
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=54.66 E-value=92 Score=27.27 Aligned_cols=75 Identities=23% Similarity=0.211 Sum_probs=55.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCch------hhHH
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDE------QRVM 396 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~------~~~v 396 (428)
|..||+..+. ++..|+|++= |++.=+++++.+++.. .+|+....-..+-..+..|.+.|..|. .+.+
T Consensus 55 ~~~~al~~~~---~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~Kp~~~~~L 131 (250)
T 3r0j_A 55 NGAQALDRAR---ETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEV 131 (250)
T ss_dssp SHHHHHHHHH---HHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEEESSCCHHHH
T ss_pred CHHHHHHHHH---hCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHHH
Confidence 5566666554 2458999886 6666799999999876 699999988888888888899987652 2445
Q ss_pred HHHHHHHH
Q 014237 397 MESLMCLR 404 (428)
Q Consensus 397 lEsL~~~k 404 (428)
.+.+..+.
T Consensus 132 ~~~i~~~~ 139 (250)
T 3r0j_A 132 VARLRVIL 139 (250)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555543
No 270
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=54.53 E-value=51 Score=25.46 Aligned_cols=62 Identities=13% Similarity=0.085 Sum_probs=44.0
Q ss_pred ChHHHHHHHHhchh--cCCceEEec---CCCchHHHHHHHHh----hC-CCCeEEEEechHHHHHHHHHHCC
Q 014237 327 NYREALVEAQADES--EGADILLVK---PGLPYLDVIRLLRD----KY-PLPIAAYQVSGEYSMIKAGGALK 388 (428)
Q Consensus 327 N~~EAlrE~~lDi~--EGADilMVK---Pal~YLDII~~vk~----~~-~lPvaaYqVSGEYaMIkaAa~~G 388 (428)
|..||+........ +.-|+|++= |++.=+++++.+++ .. .+|+...--+.+...+..+.+.|
T Consensus 43 ~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g 114 (146)
T 3ilh_A 43 SGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASD 114 (146)
T ss_dssp SHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCS
T ss_pred CHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcC
Confidence 66777766653222 458999886 66777999999998 33 68888876666556666667777
No 271
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=54.47 E-value=45 Score=24.92 Aligned_cols=59 Identities=8% Similarity=0.068 Sum_probs=40.0
Q ss_pred ChHHHHHHHHhchhcCCceEEec---C-CCchHHHHHHHHhh---CCCCeEEEEechHHHHHHHHHHCCC
Q 014237 327 NYREALVEAQADESEGADILLVK---P-GLPYLDVIRLLRDK---YPLPIAAYQVSGEYSMIKAGGALKM 389 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---P-al~YLDII~~vk~~---~~lPvaaYqVSGEYaMIkaAa~~G~ 389 (428)
|..||+..... ...|+|++= | .+.-+++++.+++. ..+|+... -+.+-.....+.+.|.
T Consensus 37 ~~~~a~~~~~~---~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~~~~g~ 102 (127)
T 2gkg_A 37 DGKGSVEQIRR---DRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII-GNPDGFAQHRKLKAHA 102 (127)
T ss_dssp CHHHHHHHHHH---HCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE-ECGGGHHHHHHSTTCC
T ss_pred CHHHHHHHHHh---cCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE-ecCCchhHHHHHHhCc
Confidence 55666665542 458999885 3 55568999999987 46999998 6665555555555554
No 272
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=54.34 E-value=15 Score=37.92 Aligned_cols=137 Identities=15% Similarity=0.151 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCC-CCCcccc
Q 014237 243 ETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPR-FGDKKTY 321 (428)
Q Consensus 243 ~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~-fgDRktY 321 (428)
-|-+.+++++-.++..|.|+|= |.+++.+-+-|-+--.+--+ .+|+..+-+ -|.+|-|
T Consensus 174 Ls~~~~a~~~ye~~~GGlDfiK----------------DDE~~~~q~f~p~~eRv~~v-----~eai~rA~~eTGe~k~y 232 (432)
T 3nwr_A 174 LSAAETAALVRELCEAGVDFIK----------------DDEVCANPAHAPLAERVRAV-----MSEVRRYRERSGRPVMV 232 (432)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEE----------------CCTTCSSCTTSCHHHHHHHH-----HHHHHHHHHHHSCCCEE
T ss_pred CCHHHHHHHHHHHHhcCCceeE----------------CCCCCCCCCcccHHHHHHHH-----HHHHHHHHHHhCCcceE
Confidence 4667899999999999999973 23343332222222111100 012211111 2678888
Q ss_pred CCCCC-ChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhh------
Q 014237 322 QMNPA-NYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQR------ 394 (428)
Q Consensus 322 Qmdpa-N~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~------ 394 (428)
-+|-. ..+|.++.++.=.+.|++++||=+-..=++.++.+++.+++|+-+ |= +-.|.++...
T Consensus 233 ~~NiT~~~~em~~Ra~~a~e~G~~~~mvd~~~~G~~a~~~l~r~~~~~lh~-Hr----------A~hga~~r~~~~Gi~~ 301 (432)
T 3nwr_A 233 AFNITDDLDAMRRHAELVEREGGSCVMASINWCGFSAIQSLRRTTPLVLHA-HR----------NGYGMMSRDPALGMSF 301 (432)
T ss_dssp EEECCSCHHHHHHHHHHHHHTTCCEEEEEHHHHCHHHHHHHHHHCCSEEEE-EC----------TTTTTTTSSTTEEECH
T ss_pred EeecCCCHHHHHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHhcCCceEEE-Cc----------CcccccccCCCCCcCH
Confidence 76665 567888888888999999999987544478899999888999875 33 3345666432
Q ss_pred HHHHHHHHHHHhcccEeeh
Q 014237 395 VMMESLMCLRRAGADIILT 413 (428)
Q Consensus 395 ~vlEsL~~~kRAGAd~IiT 413 (428)
-++ -+.+|-+|+|.|++
T Consensus 302 ~vl--~Kl~RlaG~D~ih~ 318 (432)
T 3nwr_A 302 QAY--QTLWRLSGVDHMHV 318 (432)
T ss_dssp HHH--HHHHHTBTCSEEEE
T ss_pred HHH--HHHHHHcCCCeeec
Confidence 133 45677799999985
No 273
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=54.27 E-value=20 Score=35.08 Aligned_cols=74 Identities=26% Similarity=0.378 Sum_probs=43.8
Q ss_pred hcCCC-CCCCccccCCCCCChHHHHHHHHhchhcCCceEEec-----CCCch----------HHHHHHHHhhCCCCeEEE
Q 014237 309 LDSNP-RFGDKKTYQMNPANYREALVEAQADESEGADILLVK-----PGLPY----------LDVIRLLRDKYPLPIAAY 372 (428)
Q Consensus 309 a~Sap-~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-----Pal~Y----------LDII~~vk~~~~lPvaaY 372 (428)
++-+| +|-|-..|+ +.+.|+..+..=+++|||||=|= |+... +-+|+.+++.+++|+..=
T Consensus 16 lNvTPDSFsdgg~~~----~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSID 91 (314)
T 2vef_A 16 INVTPDSFSDGGQFF----ALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVLISID 91 (314)
T ss_dssp EECCC---------C----HHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred EeCCCCCCCCCCCCC----CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEEe
Confidence 44566 466665563 67899999999999999999874 66543 567888888889988641
Q ss_pred EechHHHHHHHHHHCC
Q 014237 373 QVSGEYSMIKAGGALK 388 (428)
Q Consensus 373 qVSGEYaMIkaAa~~G 388 (428)
|=.-..+++|.++|
T Consensus 92 --T~~~~Va~aAl~aG 105 (314)
T 2vef_A 92 --TWKSQVAEAALAAG 105 (314)
T ss_dssp --CSCHHHHHHHHHTT
T ss_pred --CCCHHHHHHHHHcC
Confidence 22233444444444
No 274
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=54.06 E-value=25 Score=38.27 Aligned_cols=120 Identities=17% Similarity=0.138 Sum_probs=75.3
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCc
Q 014237 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (428)
Q Consensus 159 l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~ 238 (428)
..+.++.+++.|+..|-+|..+. +=--+.++++.+|+.- ..+..++| ||.+ + ++..
T Consensus 199 ~~~~i~~a~~~Gvd~irIf~s~n-------------~l~~l~~~i~~ak~~G--~~v~~~i~---~~~d-----~-~dp~ 254 (718)
T 3bg3_A 199 VFKFCEVAKENGMDVFRVFDSLN-------------YLPNMLLGMEAAGSAG--GVVEAAIS---YTGD-----V-ADPS 254 (718)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSC-------------CHHHHHHHHHHHHTTT--SEEEEEEE---CCSC-----T-TCTT
T ss_pred hHHHHHHHHhcCcCEEEEEecHH-------------HHHHHHHHHHHHHHcC--CeEEEEEE---eecc-----c-cCCC
Confidence 56789999999999999996421 1014567788888754 55555555 3310 0 0110
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeecCCCCCC--------chHHHHHHHHHH--CCC--CCceeechhhhhcccccc
Q 014237 239 IMNDETVHQLCKQAVSQARAGADVVSPSDMMD--------GRVGAIRAALDA--EGF--QHVSIMSYTAKYASSFYG 303 (428)
Q Consensus 239 IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD--------GRV~aIR~aLD~--~Gf--~~v~IMSYsaKyASafYG 303 (428)
...-+++.+.+++-...++|||+|.-.||.= -.|.++|+.+.. -|| +|..=|+.|.=.+..-.|
T Consensus 255 -r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAG 330 (718)
T 3bg3_A 255 -RTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAG 330 (718)
T ss_dssp -CCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTT
T ss_pred -CCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhC
Confidence 0111466677777777889999999999875 357777777721 122 566667776656655555
No 275
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=54.04 E-value=31 Score=29.16 Aligned_cols=62 Identities=15% Similarity=0.202 Sum_probs=49.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+..+. +...|+|++= |++.-+++++.+++....|+...--.++......|.+.|..|
T Consensus 46 ~~~~al~~~~---~~~~dlvi~D~~~p~~~g~~~~~~l~~~~~~pii~lt~~~~~~~~~~~~~~ga~~ 110 (205)
T 1s8n_A 46 DGQEAVELAE---LHKPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMA 110 (205)
T ss_dssp SHHHHHHHHH---HHCCSEEEEESSCSSSCHHHHHHHHHHTTCSCEEEEEEGGGHHHHHTTGGGSCEE
T ss_pred CHHHHHHHHh---hcCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHhcCCcE
Confidence 6667776554 2457998876 667779999999998888999998888888888888888765
No 276
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=53.95 E-value=31 Score=33.42 Aligned_cols=41 Identities=27% Similarity=0.455 Sum_probs=29.5
Q ss_pred ChHHHHHHHHhchhcCCceEEe-cC------C------------CchHHHHHHHHhhCCCCeEE
Q 014237 327 NYREALVEAQADESEGADILLV-KP------G------------LPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMV-KP------a------------l~YLDII~~vk~~~~lPvaa 371 (428)
+.+||.+ =.+.|+|+|.| =| + ...++.++++++.+++||.+
T Consensus 154 t~~~a~~----a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPVia 213 (369)
T 3bw2_A 154 TPEEARA----VEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVA 213 (369)
T ss_dssp SHHHHHH----HHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEE
T ss_pred CHHHHHH----HHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEE
Confidence 5555443 24689999999 22 1 24589999999999999875
No 277
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=53.42 E-value=28 Score=31.76 Aligned_cols=69 Identities=10% Similarity=0.039 Sum_probs=48.0
Q ss_pred hcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhcHHHH
Q 014237 340 SEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQA 419 (428)
Q Consensus 340 ~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYfA~e~ 419 (428)
.-|+|.+-+.-...--+.|+.+++ .+++|.+|-|-+ .|.+. |.+..+.+.|+|.|||-+-..+
T Consensus 187 ~~~~~~v~~~~~~~~~~~v~~~~~-~G~~v~~wTv~~-------------~~n~~---~~~~~l~~~GvdgI~TD~p~~~ 249 (258)
T 2o55_A 187 YGDANGVSMLFHYLTKEQVCTAHE-KGLSVTVWMPWI-------------FDDSE---EDWKKCLELQVDLICSNYPFGL 249 (258)
T ss_dssp HTTCSEEEEEGGGCCHHHHHHHHH-TTCEEEEECCTT-------------CCCCH---HHHHHHHHHTCSEEEESCHHHH
T ss_pred hcCCeEEecChhhcCHHHHHHHHH-CCCEEEEeeCCC-------------CCCCH---HHHHHHHHcCCCEEEeCCHHHH
Confidence 357887765433333467888875 689999999832 22222 3444567789999999999988
Q ss_pred HHHHhc
Q 014237 420 ARCLCG 425 (428)
Q Consensus 420 a~wL~~ 425 (428)
.++|++
T Consensus 250 ~~~l~~ 255 (258)
T 2o55_A 250 MNFLSN 255 (258)
T ss_dssp HHHHTC
T ss_pred HHHHHH
Confidence 888864
No 278
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=53.39 E-value=26 Score=30.33 Aligned_cols=62 Identities=31% Similarity=0.399 Sum_probs=41.1
Q ss_pred ChHHHHHHHHhchhcCCceEEe---cCC-------CchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHH
Q 014237 327 NYREALVEAQADESEGADILLV---KPG-------LPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVM 396 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMV---KPa-------l~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~v 396 (428)
+..|+. ++ .+.|+|+|++ .|+ ..-++.++++++.+++|+.+ .|-|+.+. +
T Consensus 117 t~~e~~-~~---~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia---------------~GGI~~~n-v 176 (215)
T 1xi3_A 117 SLEEAL-EA---EKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVA---------------IGGINKDN-A 176 (215)
T ss_dssp SHHHHH-HH---HHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEE---------------ESSCCTTT-H
T ss_pred CHHHHH-HH---HhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEE---------------ECCcCHHH-H
Confidence 555643 32 3579999996 443 23578899999988999864 45566432 2
Q ss_pred HHHHHHHHHhcccEee
Q 014237 397 MESLMCLRRAGADIIL 412 (428)
Q Consensus 397 lEsL~~~kRAGAd~Ii 412 (428)
- .++.+|||.|+
T Consensus 177 ~----~~~~~Ga~gv~ 188 (215)
T 1xi3_A 177 R----EVLKTGVDGIA 188 (215)
T ss_dssp H----HHHTTTCSEEE
T ss_pred H----HHHHcCCCEEE
Confidence 3 34568999875
No 279
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=53.11 E-value=36 Score=31.49 Aligned_cols=66 Identities=17% Similarity=0.243 Sum_probs=43.4
Q ss_pred HHHHHhchh--cCCceEEe-------cC-CCch-------HHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhh
Q 014237 332 LVEAQADES--EGADILLV-------KP-GLPY-------LDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQR 394 (428)
Q Consensus 332 lrE~~lDi~--EGADilMV-------KP-al~Y-------LDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~ 394 (428)
+.++..-++ .|+|.|-+ ++ +..| +++|+.+++..++||.+= ++ .+|-+
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk-~~-----------~~~~~--- 177 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVK-LS-----------PNVTD--- 177 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEE-EC-----------SCSSC---
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEE-EC-----------CChHH---
Confidence 444444444 69998855 23 2333 899999999989998753 22 13433
Q ss_pred HHHHHHHHHHHhcccEeeh
Q 014237 395 VMMESLMCLRRAGADIILT 413 (428)
Q Consensus 395 ~vlEsL~~~kRAGAd~IiT 413 (428)
+.|....+..+|+|.|+.
T Consensus 178 -~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 178 -IVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp -SHHHHHHHHHTTCSEEEE
T ss_pred -HHHHHHHHHHcCCCEEEE
Confidence 245566778899998875
No 280
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=53.08 E-value=35 Score=32.85 Aligned_cols=80 Identities=19% Similarity=0.058 Sum_probs=49.3
Q ss_pred ccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch------------------HHHHHHHHhhCCCCeEE---EEech
Q 014237 318 KKTYQMNPANYREALVEAQADESEGADILLVKPGLPY------------------LDVIRLLRDKYPLPIAA---YQVSG 376 (428)
Q Consensus 318 RktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y------------------LDII~~vk~~~~lPvaa---YqVSG 376 (428)
...|++--.|.+. ++.+ ++-|+|.|.+=-+..- .++|+.+|+. .+.|-+ |.+|.
T Consensus 74 ~~~~~~l~~~~~~-i~~a---~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~-G~~v~~~i~~~~~~ 148 (307)
T 1ydo_A 74 GVTYAALVPNQRG-LENA---LEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKA-NLTTRAYLSTVFGC 148 (307)
T ss_dssp TCEEEEECCSHHH-HHHH---HHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECTTCB
T ss_pred CCeEEEEeCCHHh-HHHH---HhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCEEEEEEEEEecC
Confidence 3456554456543 2222 3459999886444332 4666777764 455543 34566
Q ss_pred HHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEe
Q 014237 377 EYSMIKAGGALKMIDEQRVMMESLMCLRRAGADII 411 (428)
Q Consensus 377 EYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~I 411 (428)
||. |-.|. +.++|....+..+|||.|
T Consensus 149 ~~~--------~~~~~-~~~~~~~~~~~~~Ga~~i 174 (307)
T 1ydo_A 149 PYE--------KDVPI-EQVIRLSEALFEFGISEL 174 (307)
T ss_dssp TTT--------BCCCH-HHHHHHHHHHHHHTCSCE
T ss_pred CcC--------CCCCH-HHHHHHHHHHHhcCCCEE
Confidence 763 44565 478999999999999976
No 281
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=53.02 E-value=1.2e+02 Score=28.75 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=23.0
Q ss_pred HHHHcCCCeecCCCCCC-----------------chHHHHHHHHHHCCCC
Q 014237 254 SQARAGADVVSPSDMMD-----------------GRVGAIRAALDAEGFQ 286 (428)
Q Consensus 254 s~A~AGADiVAPSDMMD-----------------GRV~aIR~aLD~~Gf~ 286 (428)
.--.+||+.+.|.=|=+ -.+..+++.+.++||.
T Consensus 288 ~~l~~Gan~~~~~~~~~~~~ag~~~~~~~~~~~~~~~~~~~~~i~~~G~~ 337 (350)
T 3t7v_A 288 LRLNAGANIVTSILPPDSQLEGVANYDRDLEERDRDIKSVVRRLEIMGMK 337 (350)
T ss_dssp HHHHTTCCEEEEECCSSCCCCCSSCTTTTCSSCCCCHHHHHHHHHHHTCE
T ss_pred HHHhcCCceecCCCCCCCCCCCCCCCcccchhccCCHHHHHHHHHHcCCc
Confidence 34478999988763323 1568888888888884
No 282
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=52.98 E-value=21 Score=35.18 Aligned_cols=49 Identities=20% Similarity=0.241 Sum_probs=36.6
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCCch--------HHHHHHHHh-hCCCCeEEEEec
Q 014237 327 NYREALVEAQADESEGADILLVKPGLPY--------LDVIRLLRD-KYPLPIAAYQVS 375 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal~Y--------LDII~~vk~-~~~lPvaaYqVS 375 (428)
|.+|+++.+..=.+-|||.+||=|-..| .+=.+.|.+ ..++||..||+-
T Consensus 103 st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 103 NTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence 6788888887767789999999664322 223346777 789999999974
No 283
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=52.93 E-value=68 Score=32.97 Aligned_cols=47 Identities=19% Similarity=0.316 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEe
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vit 217 (428)
...+.++.+++.|+..|.+... . | +.. -+...|+.||+.||++.|+.
T Consensus 256 d~~era~aLveaGvd~I~Id~a--~------g----~~~-~v~~~i~~i~~~~~~~~vi~ 302 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTA--H------G----HSQ-GVIDKVKEVRAKYPSLNIIA 302 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECS--C------T----TSH-HHHHHHHHHHHHCTTSEEEE
T ss_pred chHHHHHHHHhhccceEEeccc--c------c----chh-hhhhHHHHHHHhCCCceEEe
Confidence 4688899999999998888542 1 1 111 24569999999999976663
No 284
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=52.88 E-value=33 Score=28.69 Aligned_cols=62 Identities=19% Similarity=0.007 Sum_probs=48.0
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+..+. ++..|+|++= |++.=+++++.+++.. .+|+...--..+...+..|.+.|..|
T Consensus 39 ~~~~al~~~~---~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~ 104 (184)
T 3rqi_A 39 NKDEALKLAG---AEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYASIATAVQAVKDGADN 104 (184)
T ss_dssp SHHHHHHHHT---TSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHh---hCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHhCHHH
Confidence 6677776553 3457888875 7777799999999877 59999988888888888888888754
No 285
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=52.83 E-value=27 Score=32.03 Aligned_cols=65 Identities=8% Similarity=0.158 Sum_probs=47.1
Q ss_pred cCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhcHHHHH
Q 014237 341 EGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAA 420 (428)
Q Consensus 341 EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYfA~e~a 420 (428)
-|++.+-+.-.+.--+.|+.+++ .+++|.+|-|- .. |.+..+.+.|+|.|||-+-..+.
T Consensus 186 ~~~~~i~~~~~~~~~~~v~~~~~-~G~~v~~WTvn----------------~~----~~~~~l~~~GVdgIiTD~P~~~~ 244 (252)
T 3qvq_A 186 LDCAGLHIHQSFFDVQQVSDIKA-AGYKVLAFTIN----------------DE----SLALKLYNQGLDAVFSDYPQKIQ 244 (252)
T ss_dssp HTCSEEEEEGGGCCHHHHHHHHH-TTCEEEEECCC----------------CH----HHHHHHHHTTCCEEEESSHHHHH
T ss_pred cCCeEEecchhhCCHHHHHHHHH-CCCEEEEEcCC----------------CH----HHHHHHHHcCCCEEEeCCHHHHH
Confidence 47887765444334467777765 58999999873 32 33456677899999999999999
Q ss_pred HHHhcc
Q 014237 421 RCLCGE 426 (428)
Q Consensus 421 ~wL~~~ 426 (428)
++|+++
T Consensus 245 ~~l~~~ 250 (252)
T 3qvq_A 245 SAIDSH 250 (252)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 988753
No 286
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=52.61 E-value=57 Score=26.21 Aligned_cols=62 Identities=11% Similarity=0.117 Sum_probs=41.4
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKM 389 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~ 389 (428)
|..||+..+.. ....-|+|++= |++.-+++++.+|+.. .+|+..+--..+-..+..+.+.|.
T Consensus 69 ~~~~al~~l~~-~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~ 134 (157)
T 3hzh_A 69 DGEEAVIKYKN-HYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGA 134 (157)
T ss_dssp SHHHHHHHHHH-HGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHh-cCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCC
Confidence 56677766542 11257999986 6667799999999877 599988765444444444444443
No 287
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=51.77 E-value=8.6 Score=35.33 Aligned_cols=40 Identities=18% Similarity=0.265 Sum_probs=28.0
Q ss_pred CCCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhh
Q 014237 322 QMNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDK 364 (428)
Q Consensus 322 QmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~ 364 (428)
-+|+.|.+|+++.++. ....+|+ +|+++.+ .++|+.+|+.
T Consensus 9 alD~~~l~~~~~~~~~-~~~~v~~--~Kv~~d~~~~~G~~~v~~l~~~ 53 (239)
T 1dbt_A 9 ALDFASAEETLAFLAP-FQQEPLF--VKVGMELFYQEGPSIVKQLKER 53 (239)
T ss_dssp ECCCSSHHHHHHHTGG-GTTSCCE--EEECHHHHHHHTHHHHHHHHHT
T ss_pred EeCCCCHHHHHHHHHH-hcccCcE--EEECHHHHHHhCHHHHHHHHHC
Confidence 4688899998876542 2233455 9999765 5778888876
No 288
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=51.69 E-value=41 Score=26.16 Aligned_cols=62 Identities=15% Similarity=0.214 Sum_probs=41.2
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCCc----hHHHHHHHHh--hC-CCCeEEEEechHHHHHHHHHHCCCC
Q 014237 327 NYREALVEAQADESEGADILLVKPGLP----YLDVIRLLRD--KY-PLPIAAYQVSGEYSMIKAGGALKMI 390 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal~----YLDII~~vk~--~~-~lPvaaYqVSGEYaMIkaAa~~G~i 390 (428)
|..||+..+... ..-|+|++=-.++ -+++++.+|+ .. .+|+...--..+-..+..+.+.|..
T Consensus 37 ~~~~a~~~l~~~--~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~ 105 (140)
T 3lua_A 37 NLKKFYSIFKDL--DSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVS 105 (140)
T ss_dssp SHHHHHTTTTTC--CCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCS
T ss_pred CHHHHHHHHhcC--CCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCC
Confidence 444554433221 4679999876555 6889999998 44 6999988766655566666666644
No 289
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=51.47 E-value=33 Score=26.10 Aligned_cols=62 Identities=10% Similarity=0.225 Sum_probs=42.9
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh---CCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK---YPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~---~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... +...|+|++= |++.=+++++.+++. ..+|+....-+++......+.+.|..|
T Consensus 39 ~~~~a~~~~~---~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~ 106 (129)
T 1p6q_A 39 DGEQGMKIMA---QNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQGDRALVQKAAALGANN 106 (129)
T ss_dssp SHHHHHHHHH---TSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSCCCHHHHHHHHHHTCSC
T ss_pred CHHHHHHHHH---cCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCCCCHHHHHHHHHcCCCE
Confidence 6677776554 2457999876 566678999999985 368888877666666665565555543
No 290
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=51.34 E-value=59 Score=25.15 Aligned_cols=61 Identities=18% Similarity=0.221 Sum_probs=41.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHh--hC-CCCeEEEEechHHHHHH-HHHHCCCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRD--KY-PLPIAAYQVSGEYSMIK-AGGALKMI 390 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~--~~-~lPvaaYqVSGEYaMIk-aAa~~G~i 390 (428)
|..||+..+. ++..|+|++- |++.=+++++.+|+ .. .+|+...--..+..... .+.+.|..
T Consensus 38 ~~~~a~~~l~---~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~ 105 (140)
T 3grc_A 38 SAAQALEQVA---RRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVS 105 (140)
T ss_dssp SHHHHHHHHH---HSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCC
T ss_pred CHHHHHHHHH---hCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCC
Confidence 5567776654 3458999997 66667999999997 33 68998876555544444 44555543
No 291
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=51.16 E-value=32 Score=30.22 Aligned_cols=62 Identities=24% Similarity=0.318 Sum_probs=39.5
Q ss_pred ChHHHHHHHHhchhcCCceEEe---cCC--------CchHHHHHHHHhhCC-CCeEEEEechHHHHHHHHHHCCCCchhh
Q 014237 327 NYREALVEAQADESEGADILLV---KPG--------LPYLDVIRLLRDKYP-LPIAAYQVSGEYSMIKAGGALKMIDEQR 394 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMV---KPa--------l~YLDII~~vk~~~~-lPvaaYqVSGEYaMIkaAa~~G~iD~~~ 394 (428)
+..|+ +++. +.|+|+|.+ -|. ..=++.++++++.++ +|+.+ .|-|+.+.
T Consensus 125 t~~e~-~~a~---~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia---------------~GGI~~~n 185 (227)
T 2tps_A 125 TMSEV-KQAE---EDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVG---------------IGGITIDN 185 (227)
T ss_dssp SHHHH-HHHH---HHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEE---------------ESSCCTTT
T ss_pred CHHHH-HHHH---hCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEE---------------EcCCCHHH
Confidence 55563 3332 579999995 231 123788999999888 99865 35566443
Q ss_pred HHHHHHHHHHHhcccEee
Q 014237 395 VMMESLMCLRRAGADIIL 412 (428)
Q Consensus 395 ~vlEsL~~~kRAGAd~Ii 412 (428)
+ - .+..+|||.|.
T Consensus 186 v-~----~~~~~Ga~gv~ 198 (227)
T 2tps_A 186 A-A----PVIQAGADGVS 198 (227)
T ss_dssp S-H----HHHHTTCSEEE
T ss_pred H-H----HHHHcCCCEEE
Confidence 2 2 34457888765
No 292
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=50.60 E-value=1e+02 Score=31.44 Aligned_cols=68 Identities=29% Similarity=0.383 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
+..+.++.+++.|+..|.| .. . + | + ...+...|+.+|+.+|++.|+. |-
T Consensus 229 ~~~~~a~~l~~aG~d~I~i-d~-a--~----g----~-~~~~~~~v~~i~~~~p~~~Vi~-------------g~----- 277 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVV-DT-A--H----G----H-SKGVIERVRWVKQTFPDVQVIG-------------GN----- 277 (490)
T ss_dssp THHHHHHHHHHTTCSEEEE-EC-S--C----C----S-BHHHHHHHHHHHHHCTTSEEEE-------------EE-----
T ss_pred chHHHHHHHhhcccceEEe-cc-c--C----C----c-chhHHHHHHHHHHHCCCceEEE-------------ee-----
Confidence 4688999999999987665 31 1 1 1 1 1245679999999999977766 11
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeec
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVS 264 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVA 264 (428)
+.+- +.|....++|||.|-
T Consensus 278 -v~t~-------e~a~~l~~aGaD~I~ 296 (490)
T 4avf_A 278 -IATA-------EAAKALAEAGADAVK 296 (490)
T ss_dssp -ECSH-------HHHHHHHHTTCSEEE
T ss_pred -eCcH-------HHHHHHHHcCCCEEE
Confidence 1111 246667789999886
No 293
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=50.57 E-value=81 Score=30.82 Aligned_cols=189 Identities=15% Similarity=0.169 Sum_probs=98.2
Q ss_pred ccCcchhhhhhhhhcc--CC--CCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCChHHHhhhhcCC-CC-CCCceeeEE
Q 014237 61 KLGISDAECEAAVVAG--NI--PEAPPVPPKPAAPAGTPVVPSLPLSRRPRRNRKSPAMRASFQETN-LS-PANFVYPLF 134 (428)
Q Consensus 61 ~~~~~~~~~~a~~~~~--~~--~~~~~~~~~~~~p~g~p~~~~~~~~~R~RRlR~~~~~R~lv~Et~-L~-~~dLI~PlF 134 (428)
...+|.+|..+.+-.- +. |..-+..|+|...+ +.+-||... +.-.-....+++|++|-. .. ..=.|+|-|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---la~~IDhTl-L~p~~T~~dI~~lc~eA~~~g~aaVCV~P~~ 97 (288)
T 3oa3_A 22 MSSLNNEEWDLLISGKKATLQYPIPLLCYPAPEVVS---IAQIIDHTQ-LSLSATGSQIDVLCAEAKEYGFATVCVRPDY 97 (288)
T ss_dssp CTTCCHHHHHHHHHHHHTTSCSSCCCSCSCCCCGGG---GGGGEEEEC-CCTTCCHHHHHHHHHHHHHHTCSEEEECGGG
T ss_pred CCCCCcHHHHHHHHHHHHhcCCccccccCCCCCHHH---HHHhcCccc-CCCCCCHHHHHHHHHHHHhcCCcEEEECHHH
Confidence 3456667776654321 11 23333333333222 445555432 333445567888877732 11 122355655
Q ss_pred EeeC---C-C-Cccc---CCCCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHH
Q 014237 135 IHEG---E-E-DTPI---GAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLL 206 (428)
Q Consensus 135 V~eg---~-~-~~~I---~SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~i 206 (428)
|..- . + ...| -..|.= ..+.. .-+.|++++++.|-..|-+--.+. ..|+. ....+.+-|+.+
T Consensus 98 V~~a~~~L~~s~V~V~tVigFP~G-~~~~~-~Kv~Ea~~Ai~~GAdEIDmVINig-~lk~g-------~~~~v~~eI~~V 167 (288)
T 3oa3_A 98 VSRAVQYLQGTQVGVTCVIGFHEG-TYSTD-QKVSEAKRAMQNGASELDMVMNYP-WLSEK-------RYTDVFQDIRAV 167 (288)
T ss_dssp HHHHHHHTTTSSCEEEEEESTTTS-CSCHH-HHHHHHHHHHHTTCSEEEEECCHH-HHHTT-------CHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCeEEEEeCCCCC-CCcHH-HHHHHHHHHHHcCCCEEEEEeehh-hhcCC-------cHHHHHHHHHHH
Confidence 5321 1 1 1122 334432 12232 468899999999999998732211 12322 124577788999
Q ss_pred HHHCCC--eEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC-CC-Cc----hHHHHHH
Q 014237 207 KDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD-MM-DG----RVGAIRA 278 (428)
Q Consensus 207 K~~~Pd--l~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSD-MM-DG----RV~aIR~ 278 (428)
++..++ |-||-.. +.. +|+-+...++. -++||||+|=.|- -- -| -|.-+|+
T Consensus 168 ~~a~~~~~lKVIlEt-----------------~~L-t~eei~~A~~i---a~eaGADfVKTSTGf~~~GAT~edv~lmr~ 226 (288)
T 3oa3_A 168 RLAAKDAILKVILET-----------------SQL-TADEIIAGCVL---SSLAGADYVKTSTGFNGPGASIENVSLMSA 226 (288)
T ss_dssp HHHTTTSEEEEECCG-----------------GGC-CHHHHHHHHHH---HHHTTCSEEECCCSSSSCCCCHHHHHHHHH
T ss_pred HHHhcCCCceEEEEC-----------------CCC-CHHHHHHHHHH---HHHcCCCEEEcCCCCCCCCCCHHHHHHHHH
Confidence 988654 3444433 333 34445544444 4589999999982 11 12 4666666
Q ss_pred HHHHCC
Q 014237 279 ALDAEG 284 (428)
Q Consensus 279 aLD~~G 284 (428)
..+..|
T Consensus 227 ~v~~~g 232 (288)
T 3oa3_A 227 VCDSLQ 232 (288)
T ss_dssp HHHHSS
T ss_pred HHHHhC
Confidence 665433
No 294
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=50.48 E-value=62 Score=24.89 Aligned_cols=62 Identities=18% Similarity=0.257 Sum_probs=40.8
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC---CCCeEEEEechHHHHHHHHHHCCCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY---PLPIAAYQVSGEYSMIKAGGALKMI 390 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~---~lPvaaYqVSGEYaMIkaAa~~G~i 390 (428)
|..||+..... ....|+|++= |++.=+++++.+|+.. .+|+....-.++...+..|.+.|..
T Consensus 38 ~~~~a~~~~~~--~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~ 105 (129)
T 3h1g_A 38 HGVEAWEKLDA--NADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVN 105 (129)
T ss_dssp SHHHHHHHHHH--CTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHh--CCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCcc
Confidence 55666655432 2346888875 6666789999999743 5899987766666555555555543
No 295
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=50.30 E-value=67 Score=24.33 Aligned_cols=62 Identities=18% Similarity=0.276 Sum_probs=43.5
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh--C-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK--Y-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~--~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... +...|++++= |++.-+++++.+++. + .+|+....-+.+...+..+.+.|..|
T Consensus 37 ~~~~a~~~~~---~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~ 104 (128)
T 1jbe_A 37 DGVDALNKLQ---AGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASG 104 (128)
T ss_dssp SHHHHHHHHT---TCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHH---hcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCc
Confidence 5667776553 2457999875 666678999999973 3 58998887666666666667777654
No 296
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=50.14 E-value=44 Score=27.29 Aligned_cols=62 Identities=16% Similarity=0.182 Sum_probs=42.1
Q ss_pred CChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCCCCeEEEEechHH--HHHHHHHHCCCC
Q 014237 326 ANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYPLPIAAYQVSGEY--SMIKAGGALKMI 390 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~lPvaaYqVSGEY--aMIkaAa~~G~i 390 (428)
.|..||+..+. ++..|+|++= |++.=+++++.+++..+.|+...--..+. ..+..+.+.|..
T Consensus 58 ~~~~~al~~l~---~~~~dlvilD~~l~~~~g~~l~~~lr~~~~~~ii~~s~~~~~~~~~~~~~~~~ga~ 124 (164)
T 3t8y_A 58 KDGLEAVEKAI---ELKPDVITMDIEMPNLNGIEALKLIMKKAPTRVIMVSSLTEEGAAITIEALRNGAV 124 (164)
T ss_dssp SSHHHHHHHHH---HHCCSEEEECSSCSSSCHHHHHHHHHHHSCCEEEEEESSCCTTCHHHHHHHHTTCC
T ss_pred CCHHHHHHHhc---cCCCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEecCCccchHHHHHHHHcCcC
Confidence 36777777664 3458999986 66667999999999888888876553332 244444555543
No 297
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=49.94 E-value=33 Score=33.11 Aligned_cols=61 Identities=18% Similarity=0.191 Sum_probs=38.6
Q ss_pred HHHHHhchhcC--CceEEecCCC----chHHHHHHHHhhCC-CCeEEEEechHHHHHHHHHHCC-CCchhhHHHHHHHHH
Q 014237 332 LVEAQADESEG--ADILLVKPGL----PYLDVIRLLRDKYP-LPIAAYQVSGEYSMIKAGGALK-MIDEQRVMMESLMCL 403 (428)
Q Consensus 332 lrE~~lDi~EG--ADilMVKPal----~YLDII~~vk~~~~-lPvaaYqVSGEYaMIkaAa~~G-~iD~~~~vlEsL~~~ 403 (428)
++.+..=++.| +|++-+-.+. ..+|+|+.+|+.++ .|+.. | ..+ .|....+
T Consensus 108 ~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~----------------G~v~s-----~e~A~~a 166 (336)
T 1ypf_A 108 YEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIA----------------GNVGT-----PEAVREL 166 (336)
T ss_dssp HHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEE----------------EEECS-----HHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEE----------------CCcCC-----HHHHHHH
Confidence 34444445678 8988764422 46899999999996 55542 2 222 2344556
Q ss_pred HHhcccEeeh
Q 014237 404 RRAGADIILT 413 (428)
Q Consensus 404 kRAGAd~IiT 413 (428)
..+|||.|+.
T Consensus 167 ~~aGad~Ivv 176 (336)
T 1ypf_A 167 ENAGADATKV 176 (336)
T ss_dssp HHHTCSEEEE
T ss_pred HHcCCCEEEE
Confidence 6778888765
No 298
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=49.14 E-value=14 Score=35.70 Aligned_cols=56 Identities=13% Similarity=0.128 Sum_probs=45.0
Q ss_pred echhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEE
Q 014237 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIY 216 (428)
Q Consensus 153 ~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vi 216 (428)
++.+ ++.+...++.+.|-.-|=|.. +|++|...+|+ ....+++..||++.||++|-
T Consensus 27 vTpe-Eia~~A~~~~~AGAaivHlHv------Rd~~G~~s~d~-~~~~e~~~~IR~~~pd~ii~ 82 (275)
T 3no5_A 27 ITVS-EQVESTQAAFEAGATLVHLHV------RNDDETPTSNP-DRFALVLEGIRKHAPGMITQ 82 (275)
T ss_dssp CSHH-HHHHHHHHHHHHTCCEEEECE------ECTTSCEECCH-HHHHHHHHHHHHHSTTCEEE
T ss_pred CCHH-HHHHHHHHHHHccCcEEEEee------cCCCCCcCCCH-HHHHHHHHHHHHhCCCeEEE
Confidence 4565 699999999999998877754 45558877766 46788999999999998873
No 299
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=48.85 E-value=76 Score=29.87 Aligned_cols=158 Identities=16% Similarity=0.131 Sum_probs=77.2
Q ss_pred HHHHHHHHHCCCeE--EEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHH
Q 014237 201 RTIWLLKDRYPDLV--IYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRA 278 (428)
Q Consensus 201 rAIr~iK~~~Pdl~--VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~ 278 (428)
..++.|++..|+-. -++|..-.||-. .+.+++.......+. .
T Consensus 35 tv~~~i~~~lP~~~~iy~~D~~~~PyG~-------------~s~~~i~~~~~~i~~-----------------------~ 78 (285)
T 2jfn_A 35 SVYDEIRHLLPDLHYIYAFDNVAFPYGE-------------KSEAFIVERVVAIVT-----------------------A 78 (285)
T ss_dssp HHHHHHHHHSTTSEEEEEECTTTCCTTT-------------SCHHHHHHHHHHHHH-----------------------H
T ss_pred HHHHHHHHhCCCCCeEEeeccCCCCCcc-------------CCHHHHHHHHHHHHH-----------------------H
Confidence 35688888899744 458999889821 245666665555544 2
Q ss_pred HHHHCCCCCceeechhhhhccc-cccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCc-eEEecCCCchHH
Q 014237 279 ALDAEGFQHVSIMSYTAKYASS-FYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGAD-ILLVKPGLPYLD 356 (428)
Q Consensus 279 aLD~~Gf~~v~IMSYsaKyASa-fYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGAD-ilMVKPal~YLD 356 (428)
.|++.|. + .+-.++..+|+ ++.-.|+.. +-|-+| |.|+ ..+|++. ..+-- -|+-=|+.---+
T Consensus 79 ll~~~g~-d--~IviaCNTas~~~l~~lr~~~-~iPVig------i~~a-~~~a~~~-----~~~~rIgVLaT~~T~~s~ 142 (285)
T 2jfn_A 79 VQERYPL-A--LAVVACNTASTVSLPALREKF-DFPVVG------VVPA-IKPAARL-----TANGIVGLLATRGTVKRS 142 (285)
T ss_dssp HHHHSCC-S--EEEECCHHHHHHHHHHHHHHC-SSCEEC------CCCC-HHHHHHH-----CSSSEEEEEECTTGGGCH
T ss_pred HHHhCCC-C--EEEEECccccHHHHHHHHHhC-CCCEEe------hHHH-HHHHHHh-----cCCCEEEEEEcHHHHhhH
Confidence 3333443 2 22234555554 555455544 234433 3332 2222211 11112 222344432122
Q ss_pred HHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc---hhhHHHHHHHHHHH--hcccEee
Q 014237 357 VIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID---EQRVMMESLMCLRR--AGADIIL 412 (428)
Q Consensus 357 II~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD---~~~~vlEsL~~~kR--AGAd~Ii 412 (428)
..++.-+++..-+-.+.+...- .+ ..++.|+.+ .++.+.|.+..+++ .|+|.||
T Consensus 143 ~y~~~l~~~g~~~~v~~~~~~~-lv-~~ie~~~~~~~~~~~~l~~~l~~l~~~~~~~D~IV 201 (285)
T 2jfn_A 143 YTHELIARFANECQIEMLGSAE-MV-ELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVV 201 (285)
T ss_dssp HHHHHHHHSCTTSEEEEEECHH-HH-HHHHHHHHTCCCCHHHHHHHTHHHHTCSSCCSEEE
T ss_pred HHHHHHHHhCCCCEEeCCCCHH-HH-HHHHhcccCCHHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 3333333344333344443331 11 223334333 34678888888876 5899988
No 300
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=48.83 E-value=19 Score=33.32 Aligned_cols=52 Identities=19% Similarity=0.310 Sum_probs=41.7
Q ss_pred CceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehh
Q 014237 343 ADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 343 ADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTY 414 (428)
.|++=+=||.. -.+|+++++.++.|+.| -|.|..++-+.+. ..||||.|-|-
T Consensus 128 PD~iEiLPGi~-p~iI~~i~~~~~~PiIa---------------GGlI~~~edv~~a----l~aGA~aVsTs 179 (192)
T 3kts_A 128 PDCIELLPGII-PEQVQKMTQKLHIPVIA---------------GGLIETSEQVNQV----IASGAIAVTTS 179 (192)
T ss_dssp CSEEEEECTTC-HHHHHHHHHHHCCCEEE---------------ESSCCSHHHHHHH----HTTTEEEEEEC
T ss_pred CCEEEECCchh-HHHHHHHHHhcCCCEEE---------------ECCcCCHHHHHHH----HHcCCeEEEeC
Confidence 35655559864 59999999999999987 6899988766655 57899999884
No 301
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=48.76 E-value=57 Score=31.73 Aligned_cols=135 Identities=14% Similarity=0.037 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHcCCCeec----CCCCCC--chHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCC
Q 014237 244 TVHQLCKQAVSQARAGADVVS----PSDMMD--GRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGD 317 (428)
Q Consensus 244 Tl~~Lak~Als~A~AGADiVA----PSDMMD--GRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgD 317 (428)
+.+.+++.|....++|.+.|= -.+ ++ -+|.+||+++ |- ++.|+- +..
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~-~~~~e~v~avr~a~---g~-d~~l~v---Dan------------------- 216 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVAD-DGPAAEIANLRQVL---GP-QAKIAA---DMH------------------- 216 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCT-TCHHHHHHHHHHHH---CT-TSEEEE---ECC-------------------
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCC-hHHHHHHHHHHHHh---CC-CCEEEE---ECC-------------------
Confidence 556778888888899998863 112 23 4566666665 42 555552 111
Q ss_pred ccccCCCCCChHHHHHHHHhchh-cCCceEEecCCC-chHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchh--
Q 014237 318 KKTYQMNPANYREALVEAQADES-EGADILLVKPGL-PYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQ-- 393 (428)
Q Consensus 318 RktYQmdpaN~~EAlrE~~lDi~-EGADilMVKPal-~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~-- 393 (428)
..| +..||++-+.. ++ .|.|+|= -|-. ..++-.+++++++++||++=.---....++.+.+.|.+|-=
T Consensus 217 -~~~-----~~~~a~~~~~~-l~~~~i~~iE-qP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 288 (388)
T 2nql_A 217 -WNQ-----TPERALELIAE-MQPFDPWFAE-APVWTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQP 288 (388)
T ss_dssp -SCS-----CHHHHHHHHHH-HGGGCCSCEE-CCSCTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECC
T ss_pred -CCC-----CHHHHHHHHHH-HhhcCCCEEE-CCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 122 34666655443 33 3666542 3322 25888999999999999974332234567777778876641
Q ss_pred ----hHHHHHHHH---HHHhcccEeeh
Q 014237 394 ----RVMMESLMC---LRRAGADIILT 413 (428)
Q Consensus 394 ----~~vlEsL~~---~kRAGAd~IiT 413 (428)
--+.|++.. .+.+|-.+++.
T Consensus 289 k~~~GGit~~~~i~~~A~~~g~~~~~h 315 (388)
T 2nql_A 289 EMGHKGITNFIRIGALAAEHGIDVIPH 315 (388)
T ss_dssp CHHHHCHHHHHHHHHHHHHHTCEECCC
T ss_pred cCCCCCHHHHHHHHHHHHHcCCeEEee
Confidence 235555543 35557777665
No 302
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=48.55 E-value=1.2e+02 Score=28.54 Aligned_cols=72 Identities=18% Similarity=0.439 Sum_probs=44.4
Q ss_pred ccccCCCCCChHHHHHHHHhchhcCCceEEe----cCC-----CchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCC
Q 014237 318 KKTYQMNPANYREALVEAQADESEGADILLV----KPG-----LPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALK 388 (428)
Q Consensus 318 RktYQmdpaN~~EAlrE~~lDi~EGADilMV----KPa-----l~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G 388 (428)
.+.|.| ..+|.+.++..-.+.|..-|.. -|. --++|+++.+|+.+++++. +| .|
T Consensus 86 ~~~~~l---s~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~i~---~s-----------~g 148 (350)
T 3t7v_A 86 INRYRL---TMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIM---IS-----------PG 148 (350)
T ss_dssp CCCCBC---CHHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSCEE---EE-----------CS
T ss_pred CCceeC---CHHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCceEE---Ee-----------CC
Confidence 345666 4566666666556688886654 232 1238999999998887764 33 34
Q ss_pred CCchhhHHHHHHHHHHHhcccEe
Q 014237 389 MIDEQRVMMESLMCLRRAGADII 411 (428)
Q Consensus 389 ~iD~~~~vlEsL~~~kRAGAd~I 411 (428)
.+++ |.+..++.||.|.+
T Consensus 149 ~~~~-----e~l~~L~~aG~~~i 166 (350)
T 3t7v_A 149 LMDN-----ATLLKAREKGANFL 166 (350)
T ss_dssp SCCH-----HHHHHHHHTTEEEE
T ss_pred CCCH-----HHHHHHHHcCCCEE
Confidence 4443 44556666776654
No 303
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=48.38 E-value=27 Score=27.42 Aligned_cols=61 Identities=11% Similarity=0.152 Sum_probs=42.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---C-CCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCC
Q 014237 327 NYREALVEAQADESEGADILLVK---P-GLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKM 389 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---P-al~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~ 389 (428)
|..||+..... ..-.|+|++= | ++.-+++++.+++...+|+....-..+...+..+.+.|.
T Consensus 37 ~~~~a~~~l~~--~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~ 101 (140)
T 3h5i_A 37 TGEAAVEKVSG--GWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTEPAVVEKIRSVTA 101 (140)
T ss_dssp SHHHHHHHHHT--TCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSSCCCCGGGGGSCE
T ss_pred ChHHHHHHHhc--CCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHhCCC
Confidence 56677766542 2457999986 4 466799999999987899998876555444444444453
No 304
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=48.15 E-value=45 Score=37.96 Aligned_cols=219 Identities=17% Similarity=0.165 Sum_probs=122.1
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCc
Q 014237 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV 238 (428)
Q Consensus 159 l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~ 238 (428)
..+.++.+++.|+..|-+|..+. .---+..+++.+|+.. ..+..++| ||.|=-| +.
T Consensus 647 ~~~~i~~a~~~g~d~irif~sl~-------------~~~~~~~~i~~~~~~g--~~v~~~i~---~~~~~~d------~~ 702 (1165)
T 2qf7_A 647 VKYFVRQAAKGGIDLFRVFDCLN-------------WVENMRVSMDAIAEEN--KLCEAAIC---YTGDILN------SA 702 (1165)
T ss_dssp HHHHHHHHHHHTCCEEEEECTTC-------------CGGGGHHHHHHHHHTT--CEEEEEEE---CCSCTTC------TT
T ss_pred HHHHHHHHHhcCcCEEEEEeeHH-------------HHHHHHHHHHHHHhcc--ceEEEEEE---EeccccC------CC
Confidence 45789999999999999996421 1125668999999875 55555555 5543111 11
Q ss_pred cccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc--------hHHHHHHHHHHC-CC--CCceeechhhhhccccccchhh
Q 014237 239 IMNDETVHQLCKQAVSQARAGADVVSPSDMMDG--------RVGAIRAALDAE-GF--QHVSIMSYTAKYASSFYGPFRE 307 (428)
Q Consensus 239 IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDG--------RV~aIR~aLD~~-Gf--~~v~IMSYsaKyASafYGPFRd 307 (428)
....+++.+.+.+-...++|||+|+-.||.=+ .|.++|+.++-. ++ +|+.=|+.|.=.+..-.|- +
T Consensus 703 -r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnd~GlAvAn~laAv~aGa--~ 779 (1165)
T 2qf7_A 703 -RPKYDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREATGLPIHFHTHDTSGIAAATVLAAVEAGV--D 779 (1165)
T ss_dssp -SGGGCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHCSSCEEEEECBTTSCHHHHHHHHHHTTC--S
T ss_pred -CCCCCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHhCC--C
Confidence 01235667777777788999999999998752 466677665211 22 5566677766666666662 3
Q ss_pred hhcCCCC-CCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCc---hH---HHHHHHHhhC---CCC-------eE
Q 014237 308 ALDSNPR-FGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLP---YL---DVIRLLRDKY---PLP-------IA 370 (428)
Q Consensus 308 Aa~Sap~-fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~---YL---DII~~vk~~~---~lP-------va 370 (428)
.++++-. +|-| +.|. + -|.+..+.... |-| +++- .. +.+.+++..+ .-+ +.
T Consensus 780 ~vd~ti~GlGe~-~Gn~---~-le~vv~~L~~~--g~~-----tgidl~~L~~~s~~~~~~~~~~~~~~~~~~~~~~~v~ 847 (1165)
T 2qf7_A 780 AVDAAMDALSGN-TSQP---C-LGSIVEALSGS--ERD-----PGLDPAWIRRISFYWEAVRNQYAAFESDLKGPASEVY 847 (1165)
T ss_dssp EEEEBCGGGCSB-TSCC---B-HHHHHHHHTTS--TTC-----CCCCHHHHHHHHHHHHHHHGGGGGGCCCCCSCCTTHH
T ss_pred EEEecccccCCC-ccch---h-HHHHHHHHHhc--CCC-----ccccHHHHHHHHHHHHHHhhhccCCCCCccCCccceE
Confidence 3444432 4545 3222 1 23333333221 322 3321 11 2222333322 111 23
Q ss_pred EEEech-HHHH-HHHHHHCCCCchhhHHHHHHHHH-HHhcccEeehhcH
Q 014237 371 AYQVSG-EYSM-IKAGGALKMIDEQRVMMESLMCL-RRAGADIILTYFA 416 (428)
Q Consensus 371 aYqVSG-EYaM-IkaAa~~G~iD~~~~vlEsL~~~-kRAGAd~IiTYfA 416 (428)
.||+.| -|+- ...+.+.|..|.-.-++|-+... +..|=-.-+|-+-
T Consensus 848 ~~~~pGG~~snl~~q~~~~g~~~~~~~v~~~~~~v~~~~G~~~~vtp~S 896 (1165)
T 2qf7_A 848 LHEMPGGQFTNLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVTPSS 896 (1165)
T ss_dssp HHCCCHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTSCCCSTTHH
T ss_pred eccCCCccHHHHHHHHHHcCCchHHHHHHHHHHHHHHHcCCCccCCChh
Confidence 345544 3444 44577799887666677766666 3445545555443
No 305
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=48.03 E-value=52 Score=29.40 Aligned_cols=185 Identities=19% Similarity=0.216 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
+..+.++.+.+.|+..+.+... . ..|. ..+.....++.|++.+ ++-|+. .|
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~-~-----~~~~----~~~~~~~~i~~i~~~~-~iPvi~------------------~G 82 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDI-S-----ATHE----ERAILLDVVARVAERV-FIPLTV------------------GG 82 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEEC-C-----SSTT----CHHHHHHHHHHHHTTC-CSCEEE------------------ES
T ss_pred CHHHHHHHHHHcCCCEEEEEcC-C-----cccc----CccccHHHHHHHHHhC-CCCEEE------------------EC
Confidence 4788999999999999877542 1 1111 1233345677887764 444443 13
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecC-CCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCC
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSP-SDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFG 316 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAP-SDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fg 316 (428)
.|.+-+ ++-...++|||.|.= +..+... ..+++.+...|-..+ +++-++|--. |-|+=+.. |
T Consensus 83 gi~~~~-------~~~~~~~~Gad~V~lg~~~l~~p-~~~~~~~~~~~~~~i-~~~~~~~~~~---g~~~v~~~-----g 145 (252)
T 1ka9_F 83 GVRSLE-------DARKLLLSGADKVSVNSAAVRRP-ELIRELADHFGAQAV-VLAIDARWRG---DFPEVHVA-----G 145 (252)
T ss_dssp SCCSHH-------HHHHHHHHTCSEEEECHHHHHCT-HHHHHHHHHHCGGGE-EEEEEEEEET---TEEEEEET-----T
T ss_pred CcCCHH-------HHHHHHHcCCCEEEEChHHHhCc-HHHHHHHHHcCCCcE-EEEEEEecCC---CCEEEEEC-----C
Confidence 333322 233333569998753 3223221 234555554443222 2333332110 21221111 1
Q ss_pred CccccCCCCCChHHHHHHHHhchhcCCceEEe---cCCCc----hHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCC
Q 014237 317 DKKTYQMNPANYREALVEAQADESEGADILLV---KPGLP----YLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKM 389 (428)
Q Consensus 317 DRktYQmdpaN~~EAlrE~~lDi~EGADilMV---KPal~----YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~ 389 (428)
-... ...+..|.+++++ +.|++.+.+ +.... -++.++++++.+++|+.| .|-
T Consensus 146 ~~~~---~~~~~~e~~~~~~---~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~ipvia---------------~GG 204 (252)
T 1ka9_F 146 GRVP---TGLHAVEWAVKGV---ELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIA---------------SGG 204 (252)
T ss_dssp TTEE---EEEEHHHHHHHHH---HHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEE---------------ESC
T ss_pred Cccc---cCCcHHHHHHHHH---HcCCCEEEEecccCCCCcCCCCHHHHHHHHHHcCCCEEE---------------eCC
Confidence 0000 0012344444443 479997776 44333 489999999999999976 344
Q ss_pred CchhhHHHHHHHHHHHhcccEeeh
Q 014237 390 IDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 390 iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
|... |-+..++.+|||.++.
T Consensus 205 I~~~----~d~~~~~~~Gadgv~v 224 (252)
T 1ka9_F 205 AGRM----EHFLEAFQAGAEAALA 224 (252)
T ss_dssp CCSH----HHHHHHHHTTCSEEEE
T ss_pred CCCH----HHHHHHHHCCCHHHHH
Confidence 4432 2333444678887653
No 306
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=48.01 E-value=59 Score=29.95 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=26.3
Q ss_pred HHHHhch-hcCCceEEecCCCchHHHHHHHHhhCCCCeEE
Q 014237 333 VEAQADE-SEGADILLVKPGLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 333 rE~~lDi-~EGADilMVKPal~YLDII~~vk~~~~lPvaa 371 (428)
-+..... +-||..|-+ .-++-|+++|+.+++||..
T Consensus 39 ~~~A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~~Pvig 74 (229)
T 3q58_A 39 AAMAQAAASAGAVAVRI----EGIENLRTVRPHLSVPIIG 74 (229)
T ss_dssp HHHHHHHHHTTCSEEEE----ESHHHHHHHGGGCCSCEEE
T ss_pred HHHHHHHHHCCCcEEEE----CCHHHHHHHHHhcCCCEEE
Confidence 3444444 468999887 3578899999999999875
No 307
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=47.97 E-value=36 Score=33.11 Aligned_cols=95 Identities=16% Similarity=0.320 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecC---------C--CCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKV---------P--DALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSS 226 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi---------~--~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTs 226 (428)
...+.++.+.+.|...|-|-+-= | +...|+.|-.--|.--++.+.|+++|++. +.-|..-+..+.|..
T Consensus 145 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~ 223 (340)
T 3gr7_A 145 AFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHP 223 (340)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCST
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccC
Confidence 35555667788999999997531 2 23456666543333345677899999998 776776666555532
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 014237 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (428)
Q Consensus 227 hGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSD 267 (428)
+| .+.++ ..+.|-.+.++|+|.|--|+
T Consensus 224 ---------~g-~~~~~----~~~la~~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 224 ---------DG-LTAKD----YVPYAKRMKEQGVDLVDVSS 250 (340)
T ss_dssp ---------TS-CCGGG----HHHHHHHHHHTTCCEEEEEC
T ss_pred ---------CC-CCHHH----HHHHHHHHHHcCCCEEEEec
Confidence 12 22233 33455567889999998764
No 308
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=47.73 E-value=31 Score=30.01 Aligned_cols=75 Identities=20% Similarity=0.269 Sum_probs=53.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCch------hhHHH
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDE------QRVMM 397 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~------~~~vl 397 (428)
|..||+..+. ++..|+|++= |++.-+++++.+++...+|+....-..+...+..|.+.|..|. ...+.
T Consensus 37 ~~~~al~~l~---~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~ 113 (238)
T 2gwr_A 37 DGTQALTAVR---ELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELV 113 (238)
T ss_dssp CGGGHHHHHH---HHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEETTCCSCHHHHHHTTCCEEEEESCCHHHHH
T ss_pred CHHHHHHHHH---hCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHH
Confidence 4455555443 2357888875 6667799999999988999999988888877888888887553 23445
Q ss_pred HHHHHHH
Q 014237 398 ESLMCLR 404 (428)
Q Consensus 398 EsL~~~k 404 (428)
+.+..+.
T Consensus 114 ~~i~~~~ 120 (238)
T 2gwr_A 114 ARVRARL 120 (238)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 5555443
No 309
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=47.72 E-value=20 Score=36.21 Aligned_cols=127 Identities=17% Similarity=0.272 Sum_probs=77.7
Q ss_pred chHHHHHHHHHHCCCC---CceeechhhhhccccccchhhhhcCCCCCCCccccCCC--C------CChHHHHHHHHhch
Q 014237 271 GRVGAIRAALDAEGFQ---HVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMN--P------ANYREALVEAQADE 339 (428)
Q Consensus 271 GRV~aIR~aLD~~Gf~---~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmd--p------aN~~EAlrE~~lDi 339 (428)
-+|.+||+++.+.||. ++.||-=+| ||.||-. ....|.++ . -+..||++-. ..+
T Consensus 227 ~~l~avreav~~agy~pG~dv~L~vDaa--as~~~~~------------~n~~y~~~~n~~~~~~~~t~~eai~~~-~~l 291 (444)
T 1w6t_A 227 DGVETILAAIEAAGYVPGKDVFLGFDCA--SSEFYDK------------ERKVYDYTKFEGEGAAVRTSAEQIDYL-EEL 291 (444)
T ss_dssp HHHHHHHHHHHHTTCCBTTTBEEEEECC--GGGGBC--------------CCCEETHHHHCTTCCEECHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHhccCCCCCcEEEEEcc--chhcccc------------cCCceeeccccCcccCCCCHHHHHHHH-HHH
Confidence 5799999999999984 588886654 6888821 01235442 0 1456766544 344
Q ss_pred hcCCceEEecCCCch--HHHHHHHHhhC--CCCeEEEEe-chHHHHHHHHHHCCCCch-----hh--HHHHHHHHH---H
Q 014237 340 SEGADILLVKPGLPY--LDVIRLLRDKY--PLPIAAYQV-SGEYSMIKAGGALKMIDE-----QR--VMMESLMCL---R 404 (428)
Q Consensus 340 ~EGADilMVKPal~Y--LDII~~vk~~~--~lPvaaYqV-SGEYaMIkaAa~~G~iD~-----~~--~vlEsL~~~---k 404 (428)
.+.-++.++.=-++- ++=.+++++++ ++||++=.. -..-.-++.+.++|.+|- .+ -+.|++... +
T Consensus 292 ~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~ 371 (444)
T 1w6t_A 292 VNKYPIITIEDGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAK 371 (444)
T ss_dssp HHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHH
T ss_pred HHhCCcEEEECCCChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHH
Confidence 444678777654553 66788899988 899986431 111245566666676653 22 256665544 4
Q ss_pred HhcccEee
Q 014237 405 RAGADIIL 412 (428)
Q Consensus 405 RAGAd~Ii 412 (428)
.+|-.+++
T Consensus 372 ~~g~~v~~ 379 (444)
T 1w6t_A 372 EAGYTAVV 379 (444)
T ss_dssp HTTCEEEE
T ss_pred HCCCeEEe
Confidence 55777666
No 310
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=47.70 E-value=1.1e+02 Score=31.44 Aligned_cols=122 Identities=15% Similarity=0.216 Sum_probs=77.5
Q ss_pred hhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCC------------HHHHHHHHHHHCCCeEEEeeeccc
Q 014237 155 WRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALD 222 (428)
Q Consensus 155 ~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~------------v~rAIr~iK~~~Pdl~VitDVcLc 222 (428)
+. ++.+.+..+.++|+++|-|-|+-+. ....+..|++-+. ..+.|++++++ .|-||.|+-+-
T Consensus 118 ~~-~~~~~l~~l~~lG~~~v~l~Pi~~~---~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~--Gi~VilD~V~N 191 (558)
T 3vgf_A 118 FE-GVIRKLDYLKDLGITAIEIMPIAQF---PGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKK--GLGVILDVVYN 191 (558)
T ss_dssp HH-HHHHTHHHHHHHTCCEEEECCCEEC---SSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHT--TCEEEEEECCS
T ss_pred HH-HHHHHHHHHHHcCCcEEEECCcccC---CCCCCcCcccccccccccccCCHHHHHHHHHHHHHc--CCEEEEEEeec
Confidence 44 5889999999999999999885221 1122334554332 34566666665 79999999875
Q ss_pred CCCCCCc----------------ce-eecCCCccccHHHHHHHHHHHHHHH-HcCCCee---cCCCCCC----chHHHHH
Q 014237 223 PYSSDGH----------------DG-IVREDGVIMNDETVHQLCKQAVSQA-RAGADVV---SPSDMMD----GRVGAIR 277 (428)
Q Consensus 223 ~YTshGH----------------cG-il~~~g~IdND~Tl~~Lak~Als~A-~AGADiV---APSDMMD----GRV~aIR 277 (428)
.....++ || .++-++ -.|.+..+.|...+.-.. +.|+|-+ ++..|.| --+..|+
T Consensus 192 H~~~~~~~~~~~~~~~~~~~~~~~g~~~n~~~-~~~~~v~~~l~~~~~~w~~~~gvDGfR~D~~~~~~~~~~~~f~~~l~ 270 (558)
T 3vgf_A 192 HVGPEGNYMVKLGPYFSQKYKTPWGLTFNFDD-AESDEVRKFILENVEYWIKEYNVDGFRLSAVHAIIDTSPKHILEEIA 270 (558)
T ss_dssp CCCSSSCCGGGTSCCEEEEEEETTEEEECSSS-TTHHHHHHHHHHHHHHHHHHHCCCEEEESCGGGCCCCSSSCHHHHHH
T ss_pred cccCCCCcccccCCccCCCCCCCCCCcccCCC-CCCHHHHHHHHHHHHHHHHHhCCCEEEEecccccccccHHHHHHHHH
Confidence 5443221 11 121111 125677788888888888 5799865 4555544 3578888
Q ss_pred HHHHHC
Q 014237 278 AALDAE 283 (428)
Q Consensus 278 ~aLD~~ 283 (428)
+.+++.
T Consensus 271 ~~~~~~ 276 (558)
T 3vgf_A 271 DVVHKY 276 (558)
T ss_dssp HHHHHT
T ss_pred HHHhhc
Confidence 888875
No 311
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=47.57 E-value=30 Score=33.60 Aligned_cols=54 Identities=17% Similarity=0.259 Sum_probs=31.1
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEee
Q 014237 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTD 218 (428)
Q Consensus 160 ~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitD 218 (428)
++.++...+.|..++.+.=.+|.+ ....|-.+. +.-..-|+.|++.+ ++=|++.
T Consensus 31 ~e~A~~ye~~GA~~lsvLe~~~~D-i~~~~g~~R---~~~~~~i~~i~~~v-~iPvl~k 84 (297)
T 4adt_A 31 VEQAKIAEKAGAIGVMILENIPSE-LRNTDGVAR---SVDPLKIEEIRKCI-SINVLAK 84 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC------CCCCCC---CCCHHHHHHHHTTC-CSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCCCCc-chhcCCccc---CCCHHHHHHHHHhc-CCCEEEe
Confidence 467788888999998876333311 122221111 23456788888876 6666654
No 312
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=47.27 E-value=47 Score=24.94 Aligned_cols=60 Identities=18% Similarity=0.192 Sum_probs=35.5
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh---CCCCeEEEEechHHHHHHHHHHCCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK---YPLPIAAYQVSGEYSMIKAGGALKM 389 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~---~~lPvaaYqVSGEYaMIkaAa~~G~ 389 (428)
|..||+.... +...|++++= |++.-+++++.+++. ..+|+....-+.+......+.+.|.
T Consensus 33 ~~~~a~~~~~---~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~ 98 (124)
T 1mb3_A 33 EGLSALSIAR---ENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGC 98 (124)
T ss_dssp CHHHHHHHHH---HHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC------CHHHHHHHTC
T ss_pred CHHHHHHHHh---cCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECCCCHHHHHHHHhCCC
Confidence 5566666553 2457999875 667778999999985 2588887755444433333333333
No 313
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=47.02 E-value=35 Score=34.11 Aligned_cols=42 Identities=26% Similarity=0.181 Sum_probs=29.5
Q ss_pred HHHHhchhcCCceEEec--CCC--chHHHHHHHHhhC-CCCeEEEEe
Q 014237 333 VEAQADESEGADILLVK--PGL--PYLDVIRLLRDKY-PLPIAAYQV 374 (428)
Q Consensus 333 rE~~lDi~EGADilMVK--Pal--~YLDII~~vk~~~-~lPvaaYqV 374 (428)
..+..=++.|+|+|.+= .+. ..+|+|+.+|+.+ ++||.+=+|
T Consensus 103 e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V 149 (361)
T 3r2g_A 103 QRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNV 149 (361)
T ss_dssp HHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCc
Confidence 33344457899999883 111 2368999999987 799999655
No 314
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=46.76 E-value=54 Score=31.92 Aligned_cols=87 Identities=23% Similarity=0.331 Sum_probs=61.8
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCCchHH----------HHHHHHhhCCCCeEEEEechHHHHHHHHHH--CCC--Cch
Q 014237 327 NYREALVEAQADESEGADILLVKPGLPYLD----------VIRLLRDKYPLPIAAYQVSGEYSMIKAGGA--LKM--IDE 392 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal~YLD----------II~~vk~~~~lPvaaYqVSGEYaMIkaAa~--~G~--iD~ 392 (428)
+.++|+..+..-+++|||||=|=-+...+| +|+.+++..++|+..=. =....+++|.+ +|. |+-
T Consensus 35 ~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT--~~~~V~eaaL~~~~Ga~iINd 112 (300)
T 3k13_A 35 KYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARVPVMIDS--SKWEVIEAGLKCLQGKSIVNS 112 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEEC--SCHHHHHHHHHHCSSCCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeC--CCHHHHHHHHHhcCCCCEEEe
Confidence 678999999999999999998876655544 45444466789987643 35567788888 452 221
Q ss_pred ------hhHHHHHHHHHHHhcccEeehhc
Q 014237 393 ------QRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 393 ------~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
+.-+.+.+.-+++.||-+|+-.+
T Consensus 113 Is~~~~d~~~~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 113 ISLKEGEEVFLEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp ECSTTCHHHHHHHHHHHHHHTCEEEEESE
T ss_pred CCcccCChhHHHHHHHHHHhCCeEEEEee
Confidence 22344667778889999998776
No 315
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=46.71 E-value=25 Score=32.68 Aligned_cols=48 Identities=21% Similarity=0.478 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHcCC--CeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGV--NSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI--~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
.+...++.+.+.|. ++|.+.-.|- -+.+++.+.++|||+-|+| .++|+
T Consensus 144 T~~~ai~~L~~~G~pe~~I~~~~~va-----------------a~egl~~l~~~~P~v~i~t-a~iD~ 193 (217)
T 3dmp_A 144 SAAHAIDVLKRRGVPGERLMFLALVA-----------------APEGVQVFQDAHPDVKLYV-ASLDS 193 (217)
T ss_dssp HHHHHHHHHHTTTCCGGGEEEECSEE-----------------CHHHHHHHHHHCTTCEEEE-SEECC
T ss_pred HHHHHHHHHHHcCCCcCeEEEEEEEe-----------------CHHHHHHHHHHCCCCEEEE-EEecC
Confidence 58899999999999 7877754332 2478999999999998887 34444
No 316
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=46.53 E-value=1.5e+02 Score=30.29 Aligned_cols=91 Identities=20% Similarity=0.252 Sum_probs=60.4
Q ss_pred HHHcCCCeEEEeecCCCCCCCcccCcCcCCC--CCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCc-cccH
Q 014237 166 ARDVGVNSVVLFPKVPDALKSPTGDEAYNDN--GLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGV-IMND 242 (428)
Q Consensus 166 ~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~--g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~-IdND 242 (428)
+.++|+.-+.++.. |+.. ....--||. .-++.+++.+|+.--|+.|..|-- -=.||+++++|. |+-|
T Consensus 214 l~~lG~~v~~~~~~-pDg~---Fp~~~p~P~~~~~l~~l~~~v~~~~aDlgia~DgD------aDR~~vvd~~G~~i~gd 283 (485)
T 3uw2_A 214 FKALGCELVELFTD-IDGN---FPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGD------GDRLGVVTKDGQIIYPD 283 (485)
T ss_dssp HHHTTCCEEEESCS-CCTT---CCSSCSCTTSGGGGHHHHHHHHHSSCCEEEEECTT------SSCEEEECTTSCBCCHH
T ss_pred HHHcCCeEEEecCc-cCCC---CCCCCcCCCCHHHHHHHHHHHHhhCCCEEEEECCC------CCeEEEEeCCCceECHH
Confidence 45789998878764 3321 122223332 235678888888888999999843 336899987774 5667
Q ss_pred HHHHHHHHHHHHHHHcCCCeecCCC
Q 014237 243 ETVHQLCKQAVSQARAGADVVSPSD 267 (428)
Q Consensus 243 ~Tl~~Lak~Als~A~AGADiVAPSD 267 (428)
..+.+|++.-+.+ .-|..||.|..
T Consensus 284 ~~~alla~~ll~~-~~~~~vv~~v~ 307 (485)
T 3uw2_A 284 RQLMLFAEEVLSR-NPGAQIIYDVK 307 (485)
T ss_dssp HHHHHHHHHHHHH-STTCEEEEETT
T ss_pred HHHHHHHHHHHHh-CCCCeEEEEeC
Confidence 7888888776664 34777888754
No 317
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=46.40 E-value=1.3e+02 Score=29.09 Aligned_cols=85 Identities=15% Similarity=0.075 Sum_probs=51.5
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCCc--hHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCch-----hh--HHH
Q 014237 327 NYREALVEAQADESEGADILLVKPGLP--YLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDE-----QR--VMM 397 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal~--YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~-----~~--~vl 397 (428)
+..||++-+.. +++ .++.++.=-++ .++-.+++++++++||++=.---.-..++...++|.+|- -+ -+.
T Consensus 211 ~~~~a~~~~~~-l~~-~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 288 (392)
T 2poz_A 211 TTDETIRFCRK-IGE-LDICFVEEPCDPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGGLM 288 (392)
T ss_dssp CHHHHHHHHHH-HGG-GCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTSSCHH
T ss_pred CHHHHHHHHHH-HHh-cCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 34677665544 433 45545442233 578899999999999997433223456777778887664 22 366
Q ss_pred HHHHHHH---HhcccEeeh
Q 014237 398 ESLMCLR---RAGADIILT 413 (428)
Q Consensus 398 EsL~~~k---RAGAd~IiT 413 (428)
|++.... .+|-.+++.
T Consensus 289 ~~~~i~~~A~~~g~~~~~h 307 (392)
T 2poz_A 289 ETKKICAMAEAYNMRVAPH 307 (392)
T ss_dssp HHHHHHHHHHTTTCEECCC
T ss_pred HHHHHHHHHHHcCCeEecC
Confidence 6665554 446655554
No 318
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=46.34 E-value=36 Score=30.34 Aligned_cols=78 Identities=13% Similarity=0.119 Sum_probs=48.6
Q ss_pred HHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHH
Q 014237 166 ARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETV 245 (428)
Q Consensus 166 ~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl 245 (428)
|.+.||+.++|.|+-. +.-|..+.+...+.-=+++|+.|-|- .++...|+|.+. ..-..+.+|
T Consensus 118 L~~~gi~~lvi~G~~T--------------~~CV~~Ta~da~~~Gy~V~vv~Da~a-s~~~~~~~~~~~--a~~~h~~aL 180 (197)
T 4h17_A 118 LQELGHLDLIVCGFMS--------------HSSVSTTVRRAKDYGYRCTLVEDASA-TRDLAFKDGVIP--AAQIHQCEM 180 (197)
T ss_dssp HHHHTCSEEEEEEECT--------------TTHHHHHHHHHHHTTCEEEEEEEEEE-CCCEEETTEEEC--HHHHHHHHH
T ss_pred HHhcCCCEEEEEeeCc--------------CHHHHHHHHHHHHCCCEEEEeCcccc-ccCcccccCCCC--HHHHHHHHH
Confidence 4567999999999722 24455556666555558999999875 455556777553 222344444
Q ss_pred HHHHHHHHHHHHcCCCeecCCC
Q 014237 246 HQLCKQAVSQARAGADVVSPSD 267 (428)
Q Consensus 246 ~~Lak~Als~A~AGADiVAPSD 267 (428)
..|. ..+|+++.-.+
T Consensus 181 ~~l~-------~~~a~V~tt~e 195 (197)
T 4h17_A 181 AVMA-------DNFACVAPTAS 195 (197)
T ss_dssp HHHH-------HHTCEEECGGG
T ss_pred HHHH-------hcceEEeEHHH
Confidence 4333 35777775433
No 319
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=46.28 E-value=73 Score=28.20 Aligned_cols=90 Identities=14% Similarity=0.176 Sum_probs=55.8
Q ss_pred HHHcCCCeec------CCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCCh
Q 014237 255 QARAGADVVS------PSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANY 328 (428)
Q Consensus 255 ~A~AGADiVA------PSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~ 328 (428)
.+++|.|-|= |.++-+..+..+|+.|++.|+.=+++-.+ |. ..
T Consensus 39 ~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~--------~~----------------------~~- 87 (257)
T 3lmz_A 39 LERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPI--------YM----------------------KS- 87 (257)
T ss_dssp HHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEE--------EE----------------------CS-
T ss_pred HHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecc--------cc----------------------CC-
Confidence 3567777663 44667788999999999999854433322 11 01
Q ss_pred HHHHHHH-HhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEec
Q 014237 329 REALVEA-QADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVS 375 (428)
Q Consensus 329 ~EAlrE~-~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVS 375 (428)
.+.+++. +.=-+=||..|.+-|+.-.|.-+.+..++.++.++--+..
T Consensus 88 ~~~~~~~i~~A~~lGa~~v~~~p~~~~l~~l~~~a~~~gv~l~lEn~~ 135 (257)
T 3lmz_A 88 EEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAIHLHG 135 (257)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECGGGHHHHHHHHHHHTCEEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCEEEecCCHHHHHHHHHHHHHcCCEEEEecCC
Confidence 2222222 1112358888888888666766666666777776655553
No 320
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=46.27 E-value=68 Score=31.06 Aligned_cols=111 Identities=15% Similarity=0.133 Sum_probs=68.3
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCcc
Q 014237 160 VQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVI 239 (428)
Q Consensus 160 ~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~I 239 (428)
.+.++.+.+.|++.|.+|-.+. +. -...+.++..|+.. +.++..++ |.++
T Consensus 96 ~~~i~~a~~aGvd~v~I~~~~s----~~---------~~~~~~i~~ak~~G--~~v~~~~~-~a~~-------------- 145 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVATHCT----EA---------DVSKQHIEYARNLG--MDTVGFLM-MSHM-------------- 145 (345)
T ss_dssp HHHHHHHHHHTCCEEEEEEETT----CG---------GGGHHHHHHHHHHT--CEEEEEEE-STTS--------------
T ss_pred HHHHHHHHhCCcCEEEEEEecc----HH---------HHHHHHHHHHHHCC--CEEEEEEE-eCCC--------------
Confidence 4578888899999999984321 11 13577888888874 55555554 2221
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCeecCCCCCCc--------hHHHHHHHHH-H--CCC--CCceeechhhhhcccccc
Q 014237 240 MNDETVHQLCKQAVSQARAGADVVSPSDMMDG--------RVGAIRAALD-A--EGF--QHVSIMSYTAKYASSFYG 303 (428)
Q Consensus 240 dND~Tl~~Lak~Als~A~AGADiVAPSDMMDG--------RV~aIR~aLD-~--~Gf--~~v~IMSYsaKyASafYG 303 (428)
.+.+.+.+++-...++|||+|+-.||.=. .|.++|+.+. . -+| +|..=|+.|.-.+..-.|
T Consensus 146 ---~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aG 219 (345)
T 1nvm_A 146 ---IPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEG 219 (345)
T ss_dssp ---SCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTT
T ss_pred ---CCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcC
Confidence 12456666666667789999999887542 3566666652 1 122 444446666555555555
No 321
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=46.23 E-value=1.1e+02 Score=29.75 Aligned_cols=114 Identities=9% Similarity=0.097 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHcCCCeecCCCCCC------chHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCC
Q 014237 244 TVHQLCKQAVSQARAGADVVSPSDMMD------GRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGD 317 (428)
Q Consensus 244 Tl~~Lak~Als~A~AGADiVAPSDMMD------GRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgD 317 (428)
+.+.+++.|....++|.+.|==---.| -+|.+||+++ | .++.|+ .+....|
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~---G-~d~~l~---vDan~~~---------------- 205 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIV---G-DELPLM---LDLAVPE---------------- 205 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHH---C-SSSCEE---EECCCCS----------------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHh---C-CCCEEE---EEcCCCC----------------
Q ss_pred ccccCCCCCChHHHHHHHHhchhcCCceEEecCCCc--hHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 318 KKTYQMNPANYREALVEAQADESEGADILLVKPGLP--YLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 318 RktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~--YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
+..||++-+.. +++ .++.++.=-++ .++-.+++++++++||++=.---....++...+.|.+|
T Consensus 206 ---------~~~~a~~~~~~-l~~-~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d 270 (391)
T 2qgy_A 206 ---------DLDQTKSFLKE-VSS-FNPYWIEEPVDGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAAD 270 (391)
T ss_dssp ---------CHHHHHHHHHH-HGG-GCCSEEECSSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred ---------CHHHHHHHHHH-HHh-cCCCeEeCCCChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCC
No 322
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=46.15 E-value=1e+02 Score=29.25 Aligned_cols=168 Identities=15% Similarity=0.159 Sum_probs=94.2
Q ss_pred CceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCC
Q 014237 149 GCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDG 228 (428)
Q Consensus 149 Gv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshG 228 (428)
|+.|-..+ ..+.++...+.|..++-+- .+ .+--.|+- .-++.+++.+ ++-|+.
T Consensus 66 g~i~~~~~--p~~~A~~y~~~GA~~isvl---td-~~~f~Gs~---------~~l~~ir~~v-~lPvl~----------- 118 (272)
T 3qja_A 66 GALATIAD--PAKLAQAYQDGGARIVSVV---TE-QRRFQGSL---------DDLDAVRASV-SIPVLR----------- 118 (272)
T ss_dssp -------C--HHHHHHHHHHTTCSEEEEE---CC-GGGHHHHH---------HHHHHHHHHC-SSCEEE-----------
T ss_pred CccCCCCC--HHHHHHHHHHcCCCEEEEe---cC-hhhcCCCH---------HHHHHHHHhC-CCCEEE-----------
Confidence 44444443 5777788888999988652 21 11112221 3567777765 443331
Q ss_pred cceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecC--CCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchh
Q 014237 229 HDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSP--SDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFR 306 (428)
Q Consensus 229 HcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAP--SDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFR 306 (428)
+| .|.|+..++... .+|||.|.- +++-|..+..+.+...+.|.. +.+
T Consensus 119 ------kd-fiid~~qv~~A~-------~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~-~lv---------------- 167 (272)
T 3qja_A 119 ------KD-FVVQPYQIHEAR-------AHGADMLLLIVAALEQSVLVSMLDRTESLGMT-ALV---------------- 167 (272)
T ss_dssp ------ES-CCCSHHHHHHHH-------HTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCE-EEE----------------
T ss_pred ------Cc-cccCHHHHHHHH-------HcCCCEEEEecccCCHHHHHHHHHHHHHCCCc-EEE----------------
Confidence 12 334455443322 599999874 445455666666666666653 211
Q ss_pred hhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCC-----CchHHHHHHHHhhC--CCCeEEEEechHHH
Q 014237 307 EALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPG-----LPYLDVIRLLRDKY--PLPIAAYQVSGEYS 379 (428)
Q Consensus 307 dAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPa-----l~YLDII~~vk~~~--~lPvaaYqVSGEYa 379 (428)
+..|.+|+.+.. +.|||+|-|=+- ..-++.+.++.+.. ++|+.+ -||
T Consensus 168 -----------------ev~t~ee~~~A~----~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVa--egG--- 221 (272)
T 3qja_A 168 -----------------EVHTEQEADRAL----KAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIA--ESG--- 221 (272)
T ss_dssp -----------------EESSHHHHHHHH----HHTCSEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEEE--ESC---
T ss_pred -----------------EcCCHHHHHHHH----HCCCCEEEECCCcccccccCHHHHHHHHHhCcccCEEEE--ECC---
Confidence 113667755443 459999998652 23367788888877 588775 333
Q ss_pred HHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehh
Q 014237 380 MIKAGGALKMIDEQRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 380 MIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTY 414 (428)
.-+. |-+..++++|||.++.-
T Consensus 222 ---------I~t~-----edv~~l~~~GadgvlVG 242 (272)
T 3qja_A 222 ---------VRGT-----ADLLAYAGAGADAVLVG 242 (272)
T ss_dssp ---------CCSH-----HHHHHHHHTTCSEEEEC
T ss_pred ---------CCCH-----HHHHHHHHcCCCEEEEc
Confidence 2222 44557788899987753
No 323
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=46.06 E-value=72 Score=30.48 Aligned_cols=115 Identities=19% Similarity=0.173 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHcCCCee-------cCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCC
Q 014237 244 TVHQLCKQAVSQARAGADVV-------SPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFG 316 (428)
Q Consensus 244 Tl~~Lak~Als~A~AGADiV-------APSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fg 316 (428)
+.+.+++.|....++|.+.| .|....+ +|.+||+++ | .++.|+ .+....|
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e-~v~avr~a~---g-~~~~l~---vDan~~~--------------- 200 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYPALDQDLA-VVRSIRQAV---G-DDFGIM---VDYNQSL--------------- 200 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHH-HHHHHHHHH---C-SSSEEE---EECTTCS---------------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHH-HHHHHHHHh---C-CCCEEE---EECCCCC---------------
Q ss_pred CccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 317 DKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 317 DRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
+..||++-+..=.+-|.|++=--=.-..++-++++++++++||++=.---....++.+.+.|.+|
T Consensus 201 ----------~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d 265 (359)
T 1mdl_A 201 ----------DVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACR 265 (359)
T ss_dssp ----------CHHHHHHHHHHHHHHTCSCEECCSCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred ----------CHHHHHHHHHHHHHhCCCeEECCCChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCC
No 324
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=45.73 E-value=28 Score=33.07 Aligned_cols=109 Identities=15% Similarity=0.171 Sum_probs=71.6
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.||- +.++.|++ -+.++|+|-|.+.+. .+=|...++.+.+..+ .+++|+.=..
T Consensus 16 ~~dg~iD~-~~l~~lv~---~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---------- 80 (294)
T 3b4u_A 16 KTDGTVDI-DAMIAHAR---RCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGI-APSRIVTGVL---------- 80 (294)
T ss_dssp CTTSSBCH-HHHHHHHH---HHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTC-CGGGEEEEEC----------
T ss_pred CCCCCcCH-HHHHHHHH---HHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC----------
Confidence 35678873 33444443 456789998876553 2347777888877654 3677764322
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch--------HHHHHHHHhhC---CCCeEEEEe
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY--------LDVIRLLRDKY---PLPIAAYQV 374 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y--------LDII~~vk~~~---~lPvaaYqV 374 (428)
+ .|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+.+ ++|+..||+
T Consensus 81 -----~--------------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~ 141 (294)
T 3b4u_A 81 -----V--------------DSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNI 141 (294)
T ss_dssp -----C--------------SSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred -----C--------------ccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEEC
Confidence 1 15688887777666789999999664322 22334667788 899999997
Q ss_pred ch
Q 014237 375 SG 376 (428)
Q Consensus 375 SG 376 (428)
-|
T Consensus 142 P~ 143 (294)
T 3b4u_A 142 PS 143 (294)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 325
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=45.67 E-value=54 Score=30.18 Aligned_cols=87 Identities=18% Similarity=0.235 Sum_probs=56.1
Q ss_pred cCCCCCChHHHHHHHHhchhcCCceEEec-------CCCch-HHHHHHHHhh--CCCCeEE-EEec--hHHHHHHHHHHC
Q 014237 321 YQMNPANYREALVEAQADESEGADILLVK-------PGLPY-LDVIRLLRDK--YPLPIAA-YQVS--GEYSMIKAGGAL 387 (428)
Q Consensus 321 YQmdpaN~~EAlrE~~lDi~EGADilMVK-------Pal~Y-LDII~~vk~~--~~lPvaa-YqVS--GEYaMIkaAa~~ 387 (428)
.-.|..|..|+++.+. +-|||.+=++ |.+.| .++|+.+|+. +++|+-+ -.|. +.| ++.+++.
T Consensus 12 l~~D~~~l~~~i~~l~---~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~--i~~~~~a 86 (228)
T 3ovp_A 12 LNSDLANLGAECLRML---DSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQW--VKPMAVA 86 (228)
T ss_dssp TTSCGGGHHHHHHHHH---HTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGG--HHHHHHH
T ss_pred eeCCchhHHHHHHHHH---HcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHH--HHHHHHc
Confidence 4468889899888875 5789977663 33444 7999999998 4788764 2222 334 4555555
Q ss_pred CCCch-------hhHHHHHHHHHHHhcccEeeh
Q 014237 388 KMIDE-------QRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 388 G~iD~-------~~~vlEsL~~~kRAGAd~IiT 413 (428)
|. |. ..-+.+.+..+|++|..+.++
T Consensus 87 Ga-d~itvH~Ea~~~~~~~i~~i~~~G~k~gva 118 (228)
T 3ovp_A 87 GA-NQYTFHLEATENPGALIKDIRENGMKVGLA 118 (228)
T ss_dssp TC-SEEEEEGGGCSCHHHHHHHHHHTTCEEEEE
T ss_pred CC-CEEEEccCCchhHHHHHHHHHHcCCCEEEE
Confidence 52 11 123566777777777766654
No 326
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=45.48 E-value=43 Score=26.23 Aligned_cols=50 Identities=14% Similarity=0.073 Sum_probs=35.1
Q ss_pred cCCceEEecC---CCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCC
Q 014237 341 EGADILLVKP---GLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMI 390 (428)
Q Consensus 341 EGADilMVKP---al~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~i 390 (428)
+-.|+|++=- ++.-+++++.+++.. .+|+...--..+-..+..+.+.|..
T Consensus 66 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~ 119 (146)
T 4dad_A 66 DAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVR 119 (146)
T ss_dssp TTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEE
T ss_pred CCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCc
Confidence 5678998874 445688999999887 5899887665555555555555543
No 327
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=45.36 E-value=52 Score=25.61 Aligned_cols=60 Identities=12% Similarity=0.128 Sum_probs=43.0
Q ss_pred CChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCC
Q 014237 326 ANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALK 388 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G 388 (428)
.|..||+.... ++..|+|++= |++.=+|+++.+++.. ..|+...--..+...+..+...|
T Consensus 31 ~~~~~a~~~~~---~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~ 94 (139)
T 2jk1_A 31 QGAEAAIAILE---EEWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYTDSASMMAAINDA 94 (139)
T ss_dssp SSHHHHHHHHH---HSCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHh---cCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCCChHHHHHHHHhh
Confidence 36677776654 3458999886 6666789999999876 58998887666666666665543
No 328
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=44.43 E-value=57 Score=32.26 Aligned_cols=187 Identities=13% Similarity=0.063 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecC---------C--CCCCCcccCcCcCCCCCHHHHHHHHHHHCC-CeEEEeeecccCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKV---------P--DALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYS 225 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi---------~--~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P-dl~VitDVcLc~YT 225 (428)
...+.++.+.+.|...|-|-+-= | +...|+.|-.--|.--++.+.+++++++++ + -|...+....+-
T Consensus 167 ~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~vrls~~~~~ 245 (377)
T 2r14_A 167 DYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGIRLTPFLEL 245 (377)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCCC
T ss_pred HHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEEEecccccc
Confidence 46666777789999999995420 2 234566654432333356677899999887 5 666676654332
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 226 shGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
...|. | .+++...+.|-...++|+|.|.=|.-+ .. +. ..+. + + .|-.-+
T Consensus 246 ~~~~~------~-----~~~~~~~~la~~le~~Gvd~i~v~~~~---~~---~~--~~~~-~---~--------~~~~~i 294 (377)
T 2r14_A 246 FGLTD------D-----EPEAMAFYLAGELDRRGLAYLHFNEPD---WI---GG--DITY-P---E--------GFREQM 294 (377)
T ss_dssp TTCCC------S-----CHHHHHHHHHHHHHHTTCSEEEEECCC--------------CC-C---T--------THHHHH
T ss_pred CCCCC------C-----CCHHHHHHHHHHHHHcCCCEEEEeCCc---cc---CC--CCcc-h---H--------HHHHHH
Confidence 11121 1 133445555666778999999866521 10 00 0010 0 1 122234
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcC-CceEEe-cCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHH
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEG-ADILLV-KPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKA 383 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EG-ADilMV-KPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIka 383 (428)
|++++ -|-.+.- . ++| ++| +.=+++| ||+||+ .|.+.-=|+++++++. .|+..|.-+.=|.
T Consensus 295 k~~~~-iPvi~~G-g--i~~---~~a----~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g--~~l~~~~~~t~y~---- 357 (377)
T 2r14_A 295 RQRFK-GGLIYCG-N--YDA---GRA----QARLDDNTADAVAFGRPFIANPDLPERFRLG--AALNEPDPSTFYG---- 357 (377)
T ss_dssp HHHCC-SEEEEES-S--CCH---HHH----HHHHHTTSCSEEEESHHHHHCTTHHHHHHHT--CCCCCCCGGGSSS----
T ss_pred HHHCC-CCEEEEC-C--CCH---HHH----HHHHHCCCceEEeecHHHHhCchHHHHHHcC--CCCCCCCHHhcCC----
Confidence 44442 2333211 1 122 222 2224566 999988 4666666999999875 4555566655552
Q ss_pred HHHCCCCchh
Q 014237 384 GGALKMIDEQ 393 (428)
Q Consensus 384 Aa~~G~iD~~ 393 (428)
..++|++|..
T Consensus 358 ~~~~gy~dyp 367 (377)
T 2r14_A 358 GAEVGYTDYP 367 (377)
T ss_dssp SSSTTTTCSC
T ss_pred CCCCCcccCc
Confidence 2346887753
No 329
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=44.43 E-value=35 Score=32.81 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=70.5
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC--------CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM--------MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM--------MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
++||.||-| .++.|++ -+.++|+|-|.+.+. .+=|...++.+.+..+ .+++|+.=..
T Consensus 20 ~~dg~iD~~-~l~~lv~---~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpViaGvg---------- 84 (311)
T 3h5d_A 20 HEDGSINFD-AIPALIE---HLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVN-GRVPLIAGVG---------- 84 (311)
T ss_dssp CTTSSBCTT-HHHHHHH---HHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSC-SSSCEEEECC----------
T ss_pred CCCCCcCHH-HHHHHHH---HHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC----------
Confidence 346777644 3444443 455899998776653 3457778888887765 4777775421
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCC-ceEEecCCCch-------HHHHHHHHhhCCCCeEEEEech
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEGA-DILLVKPGLPY-------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGA-DilMVKPal~Y-------LDII~~vk~~~~lPvaaYqVSG 376 (428)
+ .|.+|+++.+..=.+-|| |.+||=|-..| .+-.+.+.+..++|+..||+-|
T Consensus 85 -----~--------------~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 144 (311)
T 3h5d_A 85 -----T--------------NDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPG 144 (311)
T ss_dssp -----C--------------SSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHH
T ss_pred -----C--------------cCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeccc
Confidence 1 157777766654334487 99998764322 4445677788899999999754
No 330
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=44.30 E-value=30 Score=32.81 Aligned_cols=48 Identities=19% Similarity=0.362 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHcCC--CeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGV--NSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI--~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
.+...++.+.+.|. ++|.+.-.|- -+.+++.|.+.||++.|+|. ++|+
T Consensus 171 T~~~ai~~L~~~G~~p~~I~~~~lva-----------------ap~g~~~l~~~~p~v~I~ta-~ID~ 220 (243)
T 1bd3_D 171 SVCKAIEVLLRLGVKEERIIFVNILA-----------------APQGIERVFKEYPKVRMVTA-AVDI 220 (243)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEEE-----------------CHHHHHHHHHHCTTSEEEEE-EECS
T ss_pred HHHHHHHHHHHcCCCcceEEEEEEEe-----------------CHHHHHHHHHHCCCCEEEEE-EecC
Confidence 48889999999999 8887765432 14589999999999999887 4554
No 331
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=44.18 E-value=58 Score=30.89 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=26.5
Q ss_pred chhcCCceEEecC-------C---CchHHHHHHHHhhCCCCeEE
Q 014237 338 DESEGADILLVKP-------G---LPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 338 Di~EGADilMVKP-------a---l~YLDII~~vk~~~~lPvaa 371 (428)
-++.|+|.|.+-. + .+-++.++++++.+++||.+
T Consensus 134 ~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPvia 177 (328)
T 2gjl_A 134 AERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIA 177 (328)
T ss_dssp HHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEE
T ss_pred HHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEE
Confidence 3568999999942 1 25678999999999999865
No 332
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=43.66 E-value=1.2e+02 Score=29.86 Aligned_cols=47 Identities=19% Similarity=0.312 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEe
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vit 217 (428)
...+.++.+.+.|+..|.|-. . . | ++ ..+...|+.+|+.+|++-|+.
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~--~--~----g----~~-~~~~e~i~~ir~~~~~~pviv 199 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDS--A--H----G----HS-TRIIELIKKIKTKYPNLDLIA 199 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECC--S--C----C----SS-HHHHHHHHHHHHHCTTCEEEE
T ss_pred hHHHHHHHHHHCCCCEEEEeC--C--C----C----Ch-HHHHHHHHHHHHHCCCCeEEE
Confidence 357778889999999887721 1 1 1 12 345678899999998877764
No 333
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=43.64 E-value=38 Score=26.37 Aligned_cols=63 Identities=19% Similarity=0.164 Sum_probs=38.9
Q ss_pred CChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC---CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 326 ANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY---PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~---~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
.|..||+..+.. ...|+|++- |++.=+++++.+|+.. .+|+...--+.+-..+..+.+.|..|
T Consensus 33 ~~~~~a~~~~~~---~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~ 101 (140)
T 3n53_A 33 KNEKEALEQIDH---HHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADD 101 (140)
T ss_dssp SSHHHHHHHHHH---HCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSE
T ss_pred CCHHHHHHHHhc---CCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCe
Confidence 367788876643 468999997 4555688999999874 69999887766655555566666543
No 334
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=43.39 E-value=52 Score=31.77 Aligned_cols=115 Identities=17% Similarity=0.049 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHcCCCee-------cCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCC
Q 014237 244 TVHQLCKQAVSQARAGADVV-------SPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFG 316 (428)
Q Consensus 244 Tl~~Lak~Als~A~AGADiV-------APSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fg 316 (428)
+.+.+++.|....++|.+.| .|....+ +|.+||+++ | .++.|+ .+....|
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e-~v~avr~a~---G-~d~~l~---vDan~~~--------------- 202 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVD-RVSALREHL---G-DSFPLM---VDANMKW--------------- 202 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHH-HHHHHHHHH---C-TTSCEE---EECTTCS---------------
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHH-HHHHHHHHh---C-CCCeEE---EECCCCC---------------
Q ss_pred CccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 317 DKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 317 DRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
+..||++-+..=.+-|.+++=--=.-..++-++++++++++||++=.---....++.+.++|.+|
T Consensus 203 ----------~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d 267 (371)
T 2ovl_A 203 ----------TVDGAIRAARALAPFDLHWIEEPTIPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLT 267 (371)
T ss_dssp ----------CHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCS
T ss_pred ----------CHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCC
No 335
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=43.32 E-value=76 Score=26.81 Aligned_cols=77 Identities=19% Similarity=0.218 Sum_probs=56.0
Q ss_pred CChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCch------hhH
Q 014237 326 ANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDE------QRV 395 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~------~~~ 395 (428)
.|..||+.... +...|+|++= |++.=+++++.+++.. ..|+.....+++...+..+.+.|..|. ...
T Consensus 38 ~~~~~al~~~~---~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~ 114 (215)
T 1a04_A 38 SNGEQGIELAE---SLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPED 114 (215)
T ss_dssp SSHHHHHHHHH---HHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECCCCHHHHHHHHHTTCSEEEETTCCHHH
T ss_pred CCHHHHHHHHH---hcCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHH
Confidence 47778876654 2458999876 5566689999999887 589999988888888888888887542 234
Q ss_pred HHHHHHHHHH
Q 014237 396 MMESLMCLRR 405 (428)
Q Consensus 396 vlEsL~~~kR 405 (428)
+.+.+..+.+
T Consensus 115 L~~~i~~~~~ 124 (215)
T 1a04_A 115 LLKALHQAAA 124 (215)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 5555555544
No 336
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=43.02 E-value=52 Score=33.62 Aligned_cols=59 Identities=19% Similarity=0.152 Sum_probs=41.0
Q ss_pred hhcCCceEEecCCCc-----------------------hHHHHHHHHhhC--CCCeEEEEechHHHHHHHHHHCCCCchh
Q 014237 339 ESEGADILLVKPGLP-----------------------YLDVIRLLRDKY--PLPIAAYQVSGEYSMIKAGGALKMIDEQ 393 (428)
Q Consensus 339 i~EGADilMVKPal~-----------------------YLDII~~vk~~~--~lPvaaYqVSGEYaMIkaAa~~G~iD~~ 393 (428)
++.|+|.|.|=-... .+++|+++++.. ++||.+ .|-|..-
T Consensus 321 ~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg---------------~GGI~s~ 385 (443)
T 1tv5_A 321 LETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIA---------------SGGIFSG 385 (443)
T ss_dssp HHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEE---------------ESSCCSH
T ss_pred HHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEE---------------ECCCCCH
Confidence 457999998755321 379999999998 799876 3445444
Q ss_pred hHHHHHHHHHHHhcccEeehhcH
Q 014237 394 RVMMESLMCLRRAGADIILTYFA 416 (428)
Q Consensus 394 ~~vlEsL~~~kRAGAd~IiTYfA 416 (428)
+-+.|.| ++|||+|-.|=+
T Consensus 386 ~DA~e~l----~aGAd~Vqigra 404 (443)
T 1tv5_A 386 LDALEKI----EAGASVCQLYSC 404 (443)
T ss_dssp HHHHHHH----HTTEEEEEESHH
T ss_pred HHHHHHH----HcCCCEEEEcHH
Confidence 4555555 489999865533
No 337
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=42.50 E-value=20 Score=34.80 Aligned_cols=57 Identities=12% Similarity=0.153 Sum_probs=45.3
Q ss_pred echhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEe
Q 014237 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (428)
Q Consensus 153 ~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vit 217 (428)
++.+ ++.++..++.+.|-.-|=|.. +|+.|...++++ ...+.+..||++.||++|-.
T Consensus 31 vTpe-Eia~~A~~~~~AGAaivHlH~------Rd~~G~ps~d~~-~~~e~~~~IR~~~pd~ii~~ 87 (284)
T 3chv_A 31 ITVS-EQVESTQEAFEAGAAIAHCHV------RNDDGTPSSDPD-RFARLTEGLHTHCPGMIVQF 87 (284)
T ss_dssp CSHH-HHHHHHHHHHHHTCCEEEECE------ECTTSCEECCHH-HHHHHHHHHHHHSTTCEEEE
T ss_pred CCHH-HHHHHHHHHHHcCCcEEEeee------cCCCCCcCCCHH-HHHHHHHHHHHhCCCeEEEe
Confidence 4565 699999999999998877754 445587777664 67789999999999988754
No 338
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=42.49 E-value=48 Score=29.99 Aligned_cols=32 Identities=31% Similarity=0.372 Sum_probs=24.8
Q ss_pred hcCCceEEec-CC------CchHHHHHHHHhhCCCCeEE
Q 014237 340 SEGADILLVK-PG------LPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 340 ~EGADilMVK-Pa------l~YLDII~~vk~~~~lPvaa 371 (428)
+.|||.|.+= +. ...++.|+++++.+++|+.+
T Consensus 41 ~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~iPvi~ 79 (266)
T 2w6r_A 41 KRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA 79 (266)
T ss_dssp HHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEE
T ss_pred HCCCCEEEEEecCcccCCCcccHHHHHHHHHhcCCCEEE
Confidence 5799988861 11 23489999999999999876
No 339
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=42.23 E-value=41 Score=32.67 Aligned_cols=99 Identities=23% Similarity=0.390 Sum_probs=58.8
Q ss_pred hcCCC-CCCCccccCCCCCChHHHHHHHHhchhcCCceEEec-----CCCc----------hHHHHHHHHhhCCCCeEEE
Q 014237 309 LDSNP-RFGDKKTYQMNPANYREALVEAQADESEGADILLVK-----PGLP----------YLDVIRLLRDKYPLPIAAY 372 (428)
Q Consensus 309 a~Sap-~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-----Pal~----------YLDII~~vk~~~~lPvaaY 372 (428)
++-+| +|-|-..|+ +.++|+..+..-+++|||||=|= |+.. .+-+|+.+++. ++|+..
T Consensus 29 lNvTPDSFsdgg~~~----~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~-~vpiSI- 102 (294)
T 2y5s_A 29 LNATPDSFSDGGRFL----ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL-NVPLSI- 102 (294)
T ss_dssp EECCC--------------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG-CSCEEE-
T ss_pred EeCCCCCCCCCCCcC----CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC-CCeEEE-
Confidence 45566 476655553 66889999999999999999874 6644 36777788776 888865
Q ss_pred EechHHHHHHHHHHCC--CCch---hhHHHHHHHHHHHhcccEeehhc
Q 014237 373 QVSGEYSMIKAGGALK--MIDE---QRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 373 qVSGEYaMIkaAa~~G--~iD~---~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
=|=....+++|.++| +|+. .+ .-|.+.-.++.||-+|+...
T Consensus 103 -DT~~~~Va~aAl~aGa~iINdVsg~~-d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 103 -DTYKPAVMRAALAAGADLINDIWGFR-QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp -ECCCHHHHHHHHHHTCSEEEETTTTC-STTHHHHHSSSSCEEEEECC
T ss_pred -ECCCHHHHHHHHHcCCCEEEECCCCC-chHHHHHHHHhCCCEEEECC
Confidence 233445667776666 2221 11 11234445677887777553
No 340
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=42.03 E-value=63 Score=31.43 Aligned_cols=33 Identities=15% Similarity=0.316 Sum_probs=26.6
Q ss_pred hhcCCceEEecCCC---------------chHHHHHHHHhhC-CCCeEE
Q 014237 339 ESEGADILLVKPGL---------------PYLDVIRLLRDKY-PLPIAA 371 (428)
Q Consensus 339 i~EGADilMVKPal---------------~YLDII~~vk~~~-~lPvaa 371 (428)
.+.|+|.|.|-... ..+|.|+++|+.+ ++||.+
T Consensus 154 ~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVia 202 (350)
T 3b0p_A 154 AEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVT 202 (350)
T ss_dssp HHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEE
T ss_pred HHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEE
Confidence 35799999997642 2479999999999 899875
No 341
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=41.55 E-value=55 Score=32.33 Aligned_cols=188 Identities=11% Similarity=0.062 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecC---------C--CCCCCcccCcCcCCCCCHHHHHHHHHHHCC-CeEEEeeecccCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKV---------P--DALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYS 225 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi---------~--~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P-dl~VitDVcLc~YT 225 (428)
...+.++.+.+.|...|-|-+-= | +...|+.|-.--|.--++.+.+++++++++ + -|...+....+.
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrls~~~~~ 246 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRISPFAHY 246 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCCT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEecccccc
Confidence 46677778889999999996520 2 223466554433333356677899999887 5 566677654331
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC-CCchHHHHHHHHHHCCCCCceeechhhhhccccccc
Q 014237 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM-MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGP 304 (428)
Q Consensus 226 shGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM-MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGP 304 (428)
.|+- .+.+++...+.|-...++|+|.|.=|.- .+. ++..+..-.+..-
T Consensus 247 ----~g~~-------~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~--------------------~~~~~~~~~~~~~ 295 (376)
T 1icp_A 247 ----NEAG-------DTNPTALGLYMVESLNKYDLAYCHVVEPRMKT--------------------AWEKIECTESLVP 295 (376)
T ss_dssp ----TTCC-------CSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC--------------------------CCCCSHH
T ss_pred ----CCCC-------CCCCHHHHHHHHHHHHHcCCCEEEEcCCcccC--------------------CCCccccHHHHHH
Confidence 1211 1234555566666778999999966542 110 0000000123344
Q ss_pred hhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcC-CceEEe-cCCCchHHHHHHHHhhCCCCeEEEEechHHHHHH
Q 014237 305 FREALDSNPRFGDKKTYQMNPANYREALVEAQADESEG-ADILLV-KPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIK 382 (428)
Q Consensus 305 FRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EG-ADilMV-KPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIk 382 (428)
+|++++ -|-.+.- .+ ++ ++|. .=+++| ||+||+ .|.+.-=|+++++++. .|+..|.-+-=|.
T Consensus 296 vr~~~~-iPvi~~G-~i--~~---~~a~----~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g--~~l~~~~~~~~y~--- 359 (376)
T 1icp_A 296 MRKAYK-GTFIVAG-GY--DR---EDGN----RALIEDRADLVAYGRLFISNPDLPKRFELN--APLNKYNRDTFYT--- 359 (376)
T ss_dssp HHHHCC-SCEEEES-SC--CH---HHHH----HHHHTTSCSEEEESHHHHHCTTHHHHHHHT--CCCCCCCGGGSSC---
T ss_pred HHHHcC-CCEEEeC-CC--CH---HHHH----HHHHCCCCcEEeecHHHHhCccHHHHHHcC--CCCCCCCHHHccc---
Confidence 566553 3433211 11 22 2222 224456 999998 4666667999999875 4444555444440
Q ss_pred HHHHCCCCchh
Q 014237 383 AGGALKMIDEQ 393 (428)
Q Consensus 383 aAa~~G~iD~~ 393 (428)
....+|++|..
T Consensus 360 ~~~~~gy~dyp 370 (376)
T 1icp_A 360 SDPIVGYTDYP 370 (376)
T ss_dssp CCSSTTTTCSC
T ss_pred CCCCCCcccCc
Confidence 11245887764
No 342
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=41.30 E-value=47 Score=31.19 Aligned_cols=50 Identities=12% Similarity=0.040 Sum_probs=36.9
Q ss_pred eeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCC
Q 014237 151 YRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPD 212 (428)
Q Consensus 151 ~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pd 212 (428)
.|+..+ .+.+.++.+.+.|+..+.|. |..|. ..|+ .+.+-++.|++.+|+
T Consensus 150 ~~~~~~-~~~~~~~~~~~~G~d~i~l~--------Dt~G~--~~P~-~~~~lv~~l~~~~~~ 199 (295)
T 1ydn_A 150 GPVTPQ-AVASVTEQLFSLGCHEVSLG--------DTIGR--GTPD-TVAAMLDAVLAIAPA 199 (295)
T ss_dssp EECCHH-HHHHHHHHHHHHTCSEEEEE--------ETTSC--CCHH-HHHHHHHHHHTTSCG
T ss_pred CCCCHH-HHHHHHHHHHhcCCCEEEec--------CCCCC--cCHH-HHHHHHHHHHHhCCC
Confidence 688886 69999999999999998885 33443 2222 355678888888885
No 343
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=41.23 E-value=31 Score=33.32 Aligned_cols=66 Identities=18% Similarity=0.223 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHCCC-eEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHH
Q 014237 199 VPRTIWLLKDRYPD-LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIR 277 (428)
Q Consensus 199 v~rAIr~iK~~~Pd-l~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR 277 (428)
+..+++..++.+|+ +.|+.-|+ .. |+ + ++|+ ++|||+|--+-|--..+..++
T Consensus 185 i~~ai~~~r~~~~~~~~i~vev~-----------------tl--ee-~----~~A~---~aGaD~I~ld~~~~~~l~~~v 237 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEVECL-----------------SE--DE-A----TEAI---EAGADVIMLDNFKGDGLKMCA 237 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECS-----------------SS--HH-H----HHHH---HHTCSEEECCC----------
T ss_pred HHHHHHHHHHhcCcCCeEEEecC-----------------CH--HH-H----HHHH---HcCCCEEEECCCCHHHHHHHH
Confidence 67899999999875 33333111 01 11 1 2222 579999988776667777888
Q ss_pred HHHHHC--CCCCceee
Q 014237 278 AALDAE--GFQHVSIM 291 (428)
Q Consensus 278 ~aLD~~--Gf~~v~IM 291 (428)
+.++.. ||.++.|.
T Consensus 238 ~~l~~~~~g~~~v~I~ 253 (294)
T 3c2e_A 238 QSLKNKWNGKKHFLLE 253 (294)
T ss_dssp -----------CCEEE
T ss_pred HHhcccccCCCCeEEE
Confidence 888877 78888775
No 344
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=41.08 E-value=2e+02 Score=27.87 Aligned_cols=141 Identities=17% Similarity=0.091 Sum_probs=82.5
Q ss_pred cHHHHHHHHHHHHHHHHcCCCeecCC-------CC--------------CC---chHHHHHHHHHHCCCCCceeechhhh
Q 014237 241 NDETVHQLCKQAVSQARAGADVVSPS-------DM--------------MD---GRVGAIRAALDAEGFQHVSIMSYTAK 296 (428)
Q Consensus 241 ND~Tl~~Lak~Als~A~AGADiVAPS-------DM--------------MD---GRV~aIR~aLD~~Gf~~v~IMSYsaK 296 (428)
|..|.+.+++.|....++|.+.|==- +- ++ -+|.+||+++ |. ++.|+- .
T Consensus 143 ~~~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~av---G~-d~~l~v---D 215 (403)
T 2ox4_A 143 SKGRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAV---GP-DVDIIV---E 215 (403)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHH---CT-TSEEEE---E
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHh---CC-CCeEEE---E
Confidence 44467778888888889999886411 10 01 2455666655 42 555552 1
Q ss_pred hccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCc--hHHHHHHHHhhCCCCeEEEEe
Q 014237 297 YASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLP--YLDVIRLLRDKYPLPIAAYQV 374 (428)
Q Consensus 297 yASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~--YLDII~~vk~~~~lPvaaYqV 374 (428)
.. ..| +..||++-+.. +++ .++.++.=-++ .++-.+++++++++||++=.-
T Consensus 216 an--------------------~~~-----~~~~ai~~~~~-l~~-~~i~~iE~P~~~~d~~~~~~l~~~~~iPIa~dE~ 268 (403)
T 2ox4_A 216 NH--------------------GHT-----DLVSAIQFAKA-IEE-FNIFFYEEINTPLNPRLLKEAKKKIDIPLASGER 268 (403)
T ss_dssp CT--------------------TCS-----CHHHHHHHHHH-HGG-GCEEEEECCSCTTSTHHHHHHHHTCCSCEEECTT
T ss_pred CC--------------------CCC-----CHHHHHHHHHH-HHh-hCCCEEeCCCChhhHHHHHHHHHhCCCCEEecCC
Confidence 11 112 34777665543 443 45545542233 578899999999999997433
Q ss_pred chHHHHHHHHHHCCCCch-----hh--HHHHHHHHH---HHhcccEeehhc
Q 014237 375 SGEYSMIKAGGALKMIDE-----QR--VMMESLMCL---RRAGADIILTYF 415 (428)
Q Consensus 375 SGEYaMIkaAa~~G~iD~-----~~--~vlEsL~~~---kRAGAd~IiTYf 415 (428)
--....++.+.++|.+|- .+ -+.|++... +.+|-.+++...
T Consensus 269 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~ 319 (403)
T 2ox4_A 269 IYSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVA 319 (403)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 223456777778887664 22 355655544 445766666533
No 345
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=41.06 E-value=69 Score=27.11 Aligned_cols=76 Identities=16% Similarity=0.210 Sum_probs=54.7
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCch------hhHH
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDE------QRVM 396 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~------~~~v 396 (428)
|..||+..+. +...|+|++= |++.=+++++.+++.. .+|+....-..+...+..|.+.|..|. ...+
T Consensus 34 ~~~~a~~~~~---~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l 110 (225)
T 1kgs_A 34 DGEEGMYMAL---NEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLREL 110 (225)
T ss_dssp SHHHHHHHHH---HSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEESSCCHHHH
T ss_pred CHHHHHHHHh---cCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHhCCccEEEeCCCCHHHH
Confidence 5677776554 3468999875 6666789999999876 699999988888888888888887542 2345
Q ss_pred HHHHHHHHH
Q 014237 397 MESLMCLRR 405 (428)
Q Consensus 397 lEsL~~~kR 405 (428)
.+.+..+.+
T Consensus 111 ~~~i~~~~~ 119 (225)
T 1kgs_A 111 IARVRALIR 119 (225)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555555443
No 346
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=41.05 E-value=16 Score=34.85 Aligned_cols=48 Identities=17% Similarity=0.178 Sum_probs=34.5
Q ss_pred ccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhhCCCCeEE
Q 014237 320 TYQMNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 320 tYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~~~lPvaa 371 (428)
.-=+|..+.+||++-++. + |-.+.++|+++.+ .++|+.+|+. +.+|+.
T Consensus 31 ivALD~~~~~~al~l~~~-l--~~~v~~~KvG~~l~~~~G~~~v~~Lk~~-g~~Vfl 83 (255)
T 3ldv_A 31 IVALDYDNLADALAFVDK-I--DPSTCRLKVGKEMFTLFGPDFVRELHKR-GFSVFL 83 (255)
T ss_dssp EEEECCSSHHHHHHHHTT-S--CGGGCEEEEEHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred EEEcCCCCHHHHHHHHHH-h--CCcCcEEEeCHHHHHhhCHHHHHHHHhc-CCCEEE
Confidence 344588899998876652 3 3345689999877 6889999875 667664
No 347
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=40.89 E-value=1.7e+02 Score=28.50 Aligned_cols=86 Identities=14% Similarity=-0.011 Sum_probs=52.4
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCCc--hHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCch-----hh--HHH
Q 014237 327 NYREALVEAQADESEGADILLVKPGLP--YLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDE-----QR--VMM 397 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal~--YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~-----~~--~vl 397 (428)
+..||++-+.. +++ .++.++.=-++ .++-.+++++++++||++=.---.-..++...++|.+|- -+ -+.
T Consensus 230 ~~~~ai~~~~~-l~~-~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 307 (410)
T 2gl5_A 230 GTNSAIQFAKA-IEK-YRIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGIT 307 (410)
T ss_dssp CHHHHHHHHHH-HGG-GCEEEEECSSCSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTTCCSEECCCTTTTTHHH
T ss_pred CHHHHHHHHHH-HHh-cCCCeEECCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 35777666544 443 45545542233 588899999999999997433223456677777787664 22 366
Q ss_pred HHHHHHH---HhcccEeehh
Q 014237 398 ESLMCLR---RAGADIILTY 414 (428)
Q Consensus 398 EsL~~~k---RAGAd~IiTY 414 (428)
|++.... .+|-.+++..
T Consensus 308 ~~~~ia~~A~~~gi~~~~h~ 327 (410)
T 2gl5_A 308 EGKKICDYANIYDTTVQVHV 327 (410)
T ss_dssp HHHHHHHHHHTTTCEECCCC
T ss_pred HHHHHHHHHHHcCCeEeecC
Confidence 6665554 4466665543
No 348
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=40.50 E-value=21 Score=31.84 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=50.5
Q ss_pred ccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhhC-CCCeEE---EEechHHHHHHHHHHCCC-
Q 014237 320 TYQMNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDKY-PLPIAA---YQVSGEYSMIKAGGALKM- 389 (428)
Q Consensus 320 tYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~~-~lPvaa---YqVSGEYaMIkaAa~~G~- 389 (428)
.--+|+.|.+|+++.++. ..+..|++ |.+..+ .++|+.+|+.+ +.+++. ...-++.. ++.+++.|.
T Consensus 7 ilalD~~~~~~~~~~~~~-~~~~v~~~--kv~~~~f~~~G~~~i~~l~~~~p~~~v~lD~kl~dip~t~-~~~~~~~Gad 82 (216)
T 1q6o_A 7 QVALDNQTMDSAYETTRL-IAEEVDII--EVGTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKIL-SRMCFEANAD 82 (216)
T ss_dssp EEEECCSSHHHHHHHHHH-HGGGCSEE--EECHHHHHHHCTHHHHHHHHHCTTSEEEEEEEECSCHHHH-HHHHHHTTCS
T ss_pred EEEECCCCHHHHHHHHHH-hcccCCEE--EECHHHHHHhCHHHHHHHHHhCCCCeEEEEEEecccHHHH-HHHHHhCCCC
Confidence 344788899998877653 33456664 877663 67999999986 456553 12234432 445556653
Q ss_pred -C-----chhhHHHHHHHHHHHhccc
Q 014237 390 -I-----DEQRVMMESLMCLRRAGAD 409 (428)
Q Consensus 390 -i-----D~~~~vlEsL~~~kRAGAd 409 (428)
+ -....+-+.+..+++.|..
T Consensus 83 ~itvh~~~g~~~l~~~~~~~~~~g~~ 108 (216)
T 1q6o_A 83 WVTVICCADINTAKGALDVAKEFNGD 108 (216)
T ss_dssp EEEEETTSCHHHHHHHHHHHHHTTCE
T ss_pred EEEEeccCCHHHHHHHHHHHHHcCCC
Confidence 0 1123344555566666655
No 349
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=40.27 E-value=27 Score=33.20 Aligned_cols=88 Identities=15% Similarity=0.146 Sum_probs=0.0
Q ss_pred hccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCC-----CCeEE
Q 014237 297 YASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYP-----LPIAA 371 (428)
Q Consensus 297 yASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~-----lPvaa 371 (428)
++.+...+|+.+....| +.+.-..-..+.+|+..... .|||+||+-+ .-++-++++++..+ +|+.|
T Consensus 164 ~~g~~~~ai~~~r~~~~---~~~~i~vev~tlee~~~A~~----aGaD~I~ld~--~~~~~l~~~v~~l~~~~~~~~i~A 234 (273)
T 2b7n_A 164 HVKDLKSFLTHARKNLP---FTAKIEIECESFEEAKNAMN----AGADIVMCDN--LSVLETKEIAAYRDAHYPFVLLEA 234 (273)
T ss_dssp TCSSHHHHHHHHGGGSC---TTCCEEEEESSHHHHHHHHH----HTCSEEEEET--CCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HhCCHHHHHHHHHHhCC---CCceEEEEcCCHHHHHHHHH----cCCCEEEECC--CCHHHHHHHHHHhhccCCCcEEEE
Q ss_pred EEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 372 YQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 372 YqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
.|-|+++.+ ..+..+|||.|-+
T Consensus 235 ---------------sGGI~~~ni-----~~~~~aGaD~i~v 256 (273)
T 2b7n_A 235 ---------------SGNISLESI-----NAYAKSGVDAISV 256 (273)
T ss_dssp ---------------ESSCCTTTH-----HHHHTTTCSEEEC
T ss_pred ---------------ECCCCHHHH-----HHHHHcCCcEEEE
No 350
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=40.26 E-value=1.4e+02 Score=30.74 Aligned_cols=156 Identities=15% Similarity=0.150 Sum_probs=93.3
Q ss_pred CCCCCCceeeEEEee---CCC-CcccCCC--------CCceee-chhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCccc
Q 014237 123 NLSPANFVYPLFIHE---GEE-DTPIGAM--------PGCYRL-GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTG 189 (428)
Q Consensus 123 ~L~~~dLI~PlFV~e---g~~-~~~I~SM--------PGv~r~-s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~G 189 (428)
..+.++.||=||+.. |.. ......+ +|-|.- .+ .++.+.+..+.++||.+|-|=|+.+....| .+
T Consensus 102 ~~~~~~viY~i~~drF~~gd~~nd~~~~~~~~~~~~~~~~~~gGdl-~gi~~~Ldyl~~LGv~aI~l~Pi~~~~~~~-~~ 179 (601)
T 3edf_A 102 GFGPGDAIYQIMPDRFANGDPSNDNVAGMREQADRRHGGGRHGGDI-RGTIDHLDYIAGLGFTQLWPTPLVENDAAA-YS 179 (601)
T ss_dssp CCCTTCCEEEECHHHHCCSCGGGSSCTTCSCCCCTTSTTSCCCCCH-HHHHHTHHHHHHTTCCEEEESCCEECCCSS-SG
T ss_pred CCCccCeEEEEehHHhcCCCCCcCcCcCcccccCccccccccCcCH-HHHHHHHHHHHHcCCCEEEECccccCCCCC-CC
Confidence 555677899998853 331 1222222 233332 25 368999999999999999998864322122 12
Q ss_pred CcCcCCCCC------------HHHHHHHHHHHCCCeEEEeeecccCCCCCCcc-------------------------ee
Q 014237 190 DEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALDPYSSDGHD-------------------------GI 232 (428)
Q Consensus 190 s~A~~~~g~------------v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHc-------------------------Gi 232 (428)
...|+.-.. ..+-|+.++++ .|-||-|+-+-+- +..|- .+
T Consensus 180 ~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~--Gi~VilD~V~NH~-~~~~~~~~~~p~~dw~~~~~~~~~~~~~~~~~ 256 (601)
T 3edf_A 180 YHGYAATDHYRIDPRYGSNEDFVRLSTEARKR--GMGLIQDVVLSHI-GKHHWWMKDLPTPDWINYGGKFVPTQHHRVAV 256 (601)
T ss_dssp GGCCSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSBC-CTTSGGGGSCSSTTSBGGGGSCCBCCCCGGGG
T ss_pred CCCcCccccccccccCCCHHHHHHHHHHHHHc--CCEEEEEECCccc-CCcchhhhhCCccCceeeCCCCCCCccccccc
Confidence 345555443 45666666665 7999999988543 22221 11
Q ss_pred ecCCC--------------------ccccHHHHHHHHHHHHHHH-HcCCCeec---CCCCCCchHHHHHHHHHHC
Q 014237 233 VREDG--------------------VIMNDETVHQLCKQAVSQA-RAGADVVS---PSDMMDGRVGAIRAALDAE 283 (428)
Q Consensus 233 l~~~g--------------------~IdND~Tl~~Lak~Als~A-~AGADiVA---PSDMMDGRV~aIR~aLD~~ 283 (428)
.+..+ .-.|.+..+.|.+.+.-.. +.|+|-+= ..-|-..-+..+|+++.+.
T Consensus 257 ~d~~~~~~~~~~~~~~wf~~~lpdLN~~np~V~~~l~~~~~~Wi~~~GVDGfRlD~~~~~~~~f~~~~~~~v~~~ 331 (601)
T 3edf_A 257 QDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLTEYTRRLMAE 331 (601)
T ss_dssp GCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHTCSEEEESSGGGSCHHHHHHHHHHHHHH
T ss_pred cCCCCccccccccccccccccccccccCCHHHHHHHHHHHHHHHhhcCCCEEEeeccccCCHHHHHHHHHHHHHh
Confidence 11000 1246777788888888888 78988652 2222225567788887664
No 351
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=40.21 E-value=42 Score=34.22 Aligned_cols=60 Identities=18% Similarity=0.378 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCC---------C---HHHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNG---------L---VPRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g---------~---v~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
++.+.+..+.++||.+|-|-|+.+. ......|+.-. - +.+.|++++++ .|-||.|+-+-+
T Consensus 32 gi~~~ldyl~~lGv~~i~l~Pi~~~----~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~--Gi~vilD~V~NH 103 (555)
T 2ze0_A 32 GIIEKLDYLVELGVDIVWICPIYRS----PNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRR--GLKVILDLVINH 103 (555)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEEC----CCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEEECSB
T ss_pred HHHHHHHHHHHcCCCEEEeCCcccC----CCCCCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEeccc
Confidence 6888899999999999999886432 11223444432 2 33455555554 799999998865
No 352
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=40.09 E-value=74 Score=31.23 Aligned_cols=185 Identities=17% Similarity=0.189 Sum_probs=101.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecC---------C--CCCCCcccCcCcCCCCCHHHHHHHHHHHCC-CeEEEeeecccCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKV---------P--DALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYS 225 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi---------~--~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P-dl~VitDVcLc~YT 225 (428)
...+.++.+.+.|...|-|-+-= | +...|+.|..--|.--++.+.++++|++++ + -|..-+..+.+.
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-pv~vris~~~~~ 240 (365)
T 2gou_A 162 DYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAE-RVGVRLAPLTTL 240 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGG-GEEEEECSSCCT
T ss_pred HHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCC-cEEEEEcccccc
Confidence 35666677789999999995410 1 234566665433333456677899998886 5 454444443221
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC-CCchHHHHHHHHHHCCCCCceeechhhhhccccccc
Q 014237 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM-MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGP 304 (428)
Q Consensus 226 shGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM-MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGP 304 (428)
...| + ..|++...+.|-...++|+|.|.-|.. ++|. .++ . -.|-.-
T Consensus 241 ~~~~------~-----~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~----------~~~---~---------~~~~~~ 287 (365)
T 2gou_A 241 NGTV------D-----ADPILTYTAAAALLNKHRIVYLHIAEVDWDDA----------PDT---P---------VSFKRA 287 (365)
T ss_dssp TSCC------C-----SSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC----------CCC---C---------HHHHHH
T ss_pred CCCC------C-----CCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCC----------CCc---c---------HHHHHH
Confidence 1111 1 124445555566677899999976653 2220 010 0 012223
Q ss_pred hhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcC-CceEEe-cCCCchHHHHHHHHhhCCCCeEEEEechHHHHHH
Q 014237 305 FREALDSNPRFGDKKTYQMNPANYREALVEAQADESEG-ADILLV-KPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIK 382 (428)
Q Consensus 305 FRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EG-ADilMV-KPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIk 382 (428)
+|++++ -|-.+.- .+ +| ++| +.=+++| ||+||+ .+.+.-=|+++++++. .|+..|.-++-|.
T Consensus 288 i~~~~~-iPvi~~G-gi--~~---~~a----~~~l~~g~aD~V~igR~~i~~P~l~~~~~~g--~~l~~~~~~~~y~--- 351 (365)
T 2gou_A 288 LREAYQ-GVLIYAG-RY--NA---EKA----EQAINDGLADMIGFGRPFIANPDLPERLRHG--YPLAEHVPATLFG--- 351 (365)
T ss_dssp HHHHCC-SEEEEES-SC--CH---HHH----HHHHHTTSCSEEECCHHHHHCTTHHHHHHHT--CCCCCCCGGGSSS---
T ss_pred HHHHCC-CcEEEeC-CC--CH---HHH----HHHHHCCCcceehhcHHHHhCchHHHHHHcC--CCCCCCchhhccC---
Confidence 444442 2433211 12 33 332 2224566 999998 4555556899999875 4555677776663
Q ss_pred HHHHCCCCchh
Q 014237 383 AGGALKMIDEQ 393 (428)
Q Consensus 383 aAa~~G~iD~~ 393 (428)
..+.|++|..
T Consensus 352 -~~~~gy~dyp 361 (365)
T 2gou_A 352 -GGEKGLTDYP 361 (365)
T ss_dssp -SSSTTTTCCC
T ss_pred -CCCCCCCCCc
Confidence 2346888753
No 353
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=39.99 E-value=80 Score=29.52 Aligned_cols=125 Identities=12% Similarity=0.083 Sum_probs=72.0
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCcc
Q 014237 240 MNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKK 319 (428)
Q Consensus 240 dND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRk 319 (428)
+.++.++.|++.|.. .||.-|.|-.+-++++...+..-+=+.-....+|+
T Consensus 14 ~t~~~i~~l~~~A~~----------------------------~~~~aVcv~p~~v~~a~~~l~gv~v~tvigFP~G~-- 63 (226)
T 1vcv_A 14 LTVDEAVAGARKAEE----------------------------LGVAAYCVNPIYAPVVRPLLRKVKLCVVADFPFGA-- 63 (226)
T ss_dssp CCHHHHHHHHHHHHH----------------------------HTCSEEEECGGGHHHHGGGCSSSEEEEEESTTTCC--
T ss_pred CCHHHHHHHHHHHHH----------------------------hCCCEEEECHHHHHHHHHHhCCCeEEEEeCCCCCC--
Confidence 467777788888776 35555555555555555444221100001111233
Q ss_pred ccCCCCCChHHHHHHHHhchhcCCceEEecCCCc------h---HHHHHHHHhhC---CCCeEEEEechHHHHHHHHHHC
Q 014237 320 TYQMNPANYREALVEAQADESEGADILLVKPGLP------Y---LDVIRLLRDKY---PLPIAAYQVSGEYSMIKAGGAL 387 (428)
Q Consensus 320 tYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~------Y---LDII~~vk~~~---~lPvaaYqVSGEYaMIkaAa~~ 387 (428)
.+...-+.|++. ++.|||-|-+=.-.- | ++=|+.+++.. .+||. .+.
T Consensus 64 ------~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvI--------------lEt 122 (226)
T 1vcv_A 64 ------LPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVI--------------TEE 122 (226)
T ss_dssp ------SCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEE--------------CCG
T ss_pred ------CchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEE--------------Eec
Confidence 256667889999 999999874333222 3 33444555554 24433 256
Q ss_pred CCCchhhHHHHHHHHHHHhcccEeehh--cH
Q 014237 388 KMIDEQRVMMESLMCLRRAGADIILTY--FA 416 (428)
Q Consensus 388 G~iD~~~~vlEsL~~~kRAGAd~IiTY--fA 416 (428)
+++..++ +...-.....||||+|=|. |.
T Consensus 123 ~~Lt~ee-i~~a~~ia~eaGADfVKTSTGf~ 152 (226)
T 1vcv_A 123 PYLRDEE-RYTLYDIIAEAGAHFIKSSTGFA 152 (226)
T ss_dssp GGCCHHH-HHHHHHHHHHHTCSEEECCCSCC
T ss_pred cCCCHHH-HHHHHHHHHHcCCCEEEeCCCCC
Confidence 6666554 4555556678999999998 75
No 354
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=39.88 E-value=68 Score=30.45 Aligned_cols=80 Identities=19% Similarity=0.125 Sum_probs=51.6
Q ss_pred cccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------------------HHHHHHHHhhCCCCeEEEEechHHH
Q 014237 319 KTYQMNPANYREALVEAQADESEGADILLVKPGLPY-------------------LDVIRLLRDKYPLPIAAYQVSGEYS 379 (428)
Q Consensus 319 ktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------------------LDII~~vk~~~~lPvaaYqVSGEYa 379 (428)
-.-|+- ++..+.+.++..-+++-+|.|-+-=+-|. ++||+.+++..++||.. -++.
T Consensus 61 ~~~QL~-g~~~~~~~~aa~~a~~~~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~v-Kir~--- 135 (318)
T 1vhn_A 61 VAVQIF-GSEPNELSEAARILSEKYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSV-KTRL--- 135 (318)
T ss_dssp EEEEEE-CSCHHHHHHHHHHHTTTCSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEE-EEES---
T ss_pred EEEEeC-CCCHHHHHHHHHHHHHhCCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEE-EecC---
Confidence 344444 22234455555444444888877643332 68899999999988764 4443
Q ss_pred HHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 380 MIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 380 MIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
||-+++.. |....+..+|+|.|+-
T Consensus 136 --------G~~~~~~~--~~a~~l~~~G~d~i~v 159 (318)
T 1vhn_A 136 --------GWEKNEVE--EIYRILVEEGVDEVFI 159 (318)
T ss_dssp --------CSSSCCHH--HHHHHHHHTTCCEEEE
T ss_pred --------CCChHHHH--HHHHHHHHhCCCEEEE
Confidence 88665433 8888999999998853
No 355
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=39.83 E-value=30 Score=31.62 Aligned_cols=65 Identities=18% Similarity=0.128 Sum_probs=43.4
Q ss_pred hcCCceEEecCCCc-hHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHH-HHHhcccEeehhcHH
Q 014237 340 SEGADILLVKPGLP-YLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMC-LRRAGADIILTYFAL 417 (428)
Q Consensus 340 ~EGADilMVKPal~-YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~-~kRAGAd~IiTYfA~ 417 (428)
+-|+|.+-+.-... --+.|+++++ .+++|.+|-|- .. |.+.. +.+.|+|.|||-+-.
T Consensus 168 ~~~~~~i~~~~~~~~~~~~v~~~~~-~G~~v~~wTvn----------------~~----~~~~~~l~~~GvdgIiTD~p~ 226 (248)
T 1zcc_A 168 VHHASIIEITPAQMRRPGIIEASRK-AGLEIMVYYGG----------------DD----MAVHREIATSDVDYINLDRPD 226 (248)
T ss_dssp TTCCSEEEECHHHHHSHHHHHHHHH-HTCEEEEECCC----------------CC----HHHHHHHHHSSCSEEEESCHH
T ss_pred HcCCCEEEecHHHhCCHHHHHHHHH-CCCEEEEECCC----------------CH----HHHHHHHHHcCCCEEEECCHH
Confidence 35788776532211 2356666665 57999999872 22 33445 677899999999988
Q ss_pred HHHHHHhc
Q 014237 418 QAARCLCG 425 (428)
Q Consensus 418 e~a~wL~~ 425 (428)
.+.+++++
T Consensus 227 ~~~~~~~~ 234 (248)
T 1zcc_A 227 LFAAVRSG 234 (248)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777653
No 356
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=39.73 E-value=57 Score=32.87 Aligned_cols=66 Identities=18% Similarity=0.182 Sum_probs=41.3
Q ss_pred HHHHHHHHHHCCC---eEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHc--CCCeecCCCCCC--c-
Q 014237 200 PRTIWLLKDRYPD---LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARA--GADVVSPSDMMD--G- 271 (428)
Q Consensus 200 ~rAIr~iK~~~Pd---l~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~A--GADiVAPSDMMD--G- 271 (428)
..|++..++.||+ +.+-+| .|.+ -.+.|+..|++ |+|+|=.-.|-. |
T Consensus 197 ~~A~~~~~~~~p~~~~~~vlvD----T~d~---------------------~~~~al~~a~~l~~~d~IrlDs~~~~~gd 251 (398)
T 2i1o_A 197 EEAWKLTLENTKNGQKSVLLID----TYMD---------------------EKFAAIKIAEMFDKVDYIRLDTPSSRRGN 251 (398)
T ss_dssp HHHHHHHHHTCCTTSCCEEECC----SSSC---------------------HHHHHHHHHTTCSCCCEEEECCCGGGCSC
T ss_pred HHHHHHHHHhCCCCCCEEEEEc----CchH---------------------HHHHHHHHHHhhcCCcEEEeCCCCCCccc
Confidence 7899999999996 333333 3311 12345555566 888887666532 2
Q ss_pred ---hHHHHHHHHHHCCCCCcee
Q 014237 272 ---RVGAIRAALDAEGFQHVSI 290 (428)
Q Consensus 272 ---RV~aIR~aLD~~Gf~~v~I 290 (428)
-|..+|+.||+.||.++.|
T Consensus 252 ~~~~v~~v~~~ld~~G~~~~~I 273 (398)
T 2i1o_A 252 FEALIREVRWELALRGRSDIKI 273 (398)
T ss_dssp HHHHHHHHHHHHHHTTCTTSEE
T ss_pred HHHHHHHHHHHHHhCCCCceEE
Confidence 3555778888888766644
No 357
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=39.54 E-value=53 Score=35.05 Aligned_cols=58 Identities=21% Similarity=0.305 Sum_probs=44.2
Q ss_pred HHhchhcCCceEEecCCCch----HHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhccc
Q 014237 335 AQADESEGADILLVKPGLPY----LDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGAD 409 (428)
Q Consensus 335 ~~lDi~EGADilMVKPal~Y----LDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd 409 (428)
+..=++.|+|+|.|==+--| +|.|+.+|+.+ ++||.|=||- + .|.-..+.+||||
T Consensus 286 ~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVa---------------T-----~e~a~~Li~aGAD 345 (556)
T 4af0_A 286 LKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVV---------------T-----REQAAQLIAAGAD 345 (556)
T ss_dssp HHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEEC---------------S-----HHHHHHHHHHTCS
T ss_pred HHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEecccc---------------C-----HHHHHHHHHcCCC
Confidence 33336789999999877544 99999999999 6999999982 2 3344456779999
Q ss_pred Eee
Q 014237 410 IIL 412 (428)
Q Consensus 410 ~Ii 412 (428)
.|.
T Consensus 346 ~vk 348 (556)
T 4af0_A 346 GLR 348 (556)
T ss_dssp EEE
T ss_pred EEe
Confidence 984
No 358
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=39.31 E-value=41 Score=35.39 Aligned_cols=124 Identities=12% Similarity=0.172 Sum_probs=81.4
Q ss_pred chhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCC------------HHHHHHHHHHHCCCeEEEeeecc
Q 014237 154 GWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVAL 221 (428)
Q Consensus 154 s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~------------v~rAIr~iK~~~Pdl~VitDVcL 221 (428)
++. ++.+.+..+.++||++|-|-|+-+- ....+..|++-+. +.+.|+.++++ .|-||.|+-+
T Consensus 152 ~~~-~~~~~L~yl~~lGv~~v~l~Pi~~~---~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~--Gi~VilD~V~ 225 (618)
T 3m07_A 152 TFR-AAIAKLPYLAELGVTVIEVMPVAQF---GGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGY--GLSVVLDIVL 225 (618)
T ss_dssp SHH-HHHTTHHHHHHHTCCEEEECCCEEC---SSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred CHH-HHHHHHHHHHHcCCCEEEeCChhcc---CCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHC--CCEEEEeecC
Confidence 354 5888999999999999999886211 1122334554333 55667777665 7999999988
Q ss_pred cCCCCCCcc------eeecCC-----C---ccccHHHHHHHHHHHHHHH-HcCCCee---cCCCC----CCchHHHHHHH
Q 014237 222 DPYSSDGHD------GIVRED-----G---VIMNDETVHQLCKQAVSQA-RAGADVV---SPSDM----MDGRVGAIRAA 279 (428)
Q Consensus 222 c~YTshGHc------Gil~~~-----g---~IdND~Tl~~Lak~Als~A-~AGADiV---APSDM----MDGRV~aIR~a 279 (428)
-.....++. .-...+ | ...|.+..+.|.+.+.-.. +-|+|-+ +...| -..-+..|++.
T Consensus 226 NH~~~~~~~~~~~~~~~~~~~~~~~wg~~ln~~~p~V~~~i~~~~~~w~~~~gvDGfR~D~~~~~~~~~~~~f~~~l~~~ 305 (618)
T 3m07_A 226 NHFGPEGNYLPLLAPAFFHKERMTPWGNGIAYDVDAVRRYIIEAPLYWLTEYHLDGLRFDAIDQIEDSSARHVLVEIAQR 305 (618)
T ss_dssp SCCCSSSCCHHHHCGGGEEEEEEETTEEEECTTSHHHHHHHHHHHHHHHHHTTCSEEEETTGGGCCCCSSSCHHHHHHHH
T ss_pred ccCCCCcccccccCchhhcCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccEEEecchhhhcccchHHHHHHHHHH
Confidence 765433321 000000 0 2357888888999999888 7899865 44455 34578888888
Q ss_pred HHHC
Q 014237 280 LDAE 283 (428)
Q Consensus 280 LD~~ 283 (428)
+.+.
T Consensus 306 v~~~ 309 (618)
T 3m07_A 306 IRED 309 (618)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8775
No 359
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=39.25 E-value=12 Score=33.91 Aligned_cols=62 Identities=23% Similarity=0.152 Sum_probs=43.2
Q ss_pred CCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhcHHHHHH
Q 014237 342 GADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAAR 421 (428)
Q Consensus 342 GADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYfA~e~a~ 421 (428)
|+|.+-+.-...--+.|+.+++ .+++|.+|-| |.. |.+..+.+.|+|.|||-+-..+.+
T Consensus 184 ~~~~i~~~~~~~~~~~v~~~~~-~G~~v~~wTv----------------n~~----~~~~~l~~~GvdgI~TD~p~~~~~ 242 (247)
T 2otd_A 184 GCVSIHLNHKLLDKARVMQLKD-AGLRILVYTV----------------NKP----QHAAELLRWGVDCICTDAIDVIGP 242 (247)
T ss_dssp TCSEEEEEGGGCCHHHHHHHHH-TTCEEEEECC----------------CCH----HHHHHHHHHTCSEEEESCTTTSCT
T ss_pred CCeEEecChHhCCHHHHHHHHH-CCCEEEEEcc----------------CCH----HHHHHHHHcCCCEEEeCCHHHHHH
Confidence 6787765433333467888775 5899999988 322 345567788999999988766655
Q ss_pred HHh
Q 014237 422 CLC 424 (428)
Q Consensus 422 wL~ 424 (428)
+|+
T Consensus 243 ~l~ 245 (247)
T 2otd_A 243 NFT 245 (247)
T ss_dssp TCC
T ss_pred HHh
Confidence 554
No 360
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=39.19 E-value=25 Score=33.62 Aligned_cols=46 Identities=20% Similarity=0.221 Sum_probs=33.3
Q ss_pred CCCCCChHHHHHHHHhchhcCCce-EEecCCCch-----HHHHHHHHhhCCCCeEE
Q 014237 322 QMNPANYREALVEAQADESEGADI-LLVKPGLPY-----LDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 322 QmdpaN~~EAlrE~~lDi~EGADi-lMVKPal~Y-----LDII~~vk~~~~lPvaa 371 (428)
=+|..+.+||++=+. .+.+. + .++|+++++ +++|+.+|+. +.+|++
T Consensus 10 ALD~~~~~~al~l~~-~l~~~--v~~~~KvG~~l~~~~G~~~v~~Lk~~-g~~Vfl 61 (259)
T 3tfx_A 10 ALDLDNEEQLNKILS-KLGDP--HDVFVKVGMELFYNAGIDVIKKLTQQ-GYKIFL 61 (259)
T ss_dssp ECCCSCHHHHHHHHH-TTCCG--GGCEEEECHHHHHHHCHHHHHHHHHT-TCEEEE
T ss_pred EeCCCCHHHHHHHHH-HhCcc--cceEEEeCHHHHHhcCHHHHHHHHHC-CCcEEE
Confidence 368888898876654 24332 3 489999987 7899999986 677664
No 361
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=39.12 E-value=83 Score=30.46 Aligned_cols=116 Identities=21% Similarity=0.190 Sum_probs=67.3
Q ss_pred CchHHHHHHHHHHCCCCC-----ceee--chhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcC
Q 014237 270 DGRVGAIRAALDAEGFQH-----VSIM--SYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEG 342 (428)
Q Consensus 270 DGRV~aIR~aLD~~Gf~~-----v~IM--SYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EG 342 (428)
+.|+..-+.+++.-|..+ =.+| .---.++.....+|+.+....|. . .-.+-..+.+| ++|+ ++.|
T Consensus 157 ~~r~~e~~Av~~GG~~~hr~~l~d~vlikdnhi~~~Gti~~ai~~~r~~~~~---~-kI~vev~tlee-~~eA---~~aG 228 (296)
T 1qap_A 157 GLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPD---V-PVEVEVENLDE-LDDA---LKAG 228 (296)
T ss_dssp TCHHHHHHHHHHHTCBCCCSSSSSCEEECHHHHHHHSSHHHHHHHHHHHSTT---S-CEEEEESSHHH-HHHH---HHTT
T ss_pred ccHHHHHHHHHHCCchhhccccccEEEEEcCCeeccCCHHHHHHHHHHhCCC---C-cEEEEeCCHHH-HHHH---HHcC
Confidence 456777777776543311 1122 00112334455666666655552 2 34445556666 4444 3579
Q ss_pred CceEEecCCCchHHHHHHHHhhC--CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhc
Q 014237 343 ADILLVKPGLPYLDVIRLLRDKY--PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 343 ADilMVKPal~YLDII~~vk~~~--~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
||+||.-+ .-++-++++.+.. ++|+.| | |-|+ .|.+..+..+|+|.|-+-.
T Consensus 229 aD~I~ld~--~~~e~l~~~v~~~~~~~~I~A---S------------GGIt-----~~~i~~~a~~GvD~isvGs 281 (296)
T 1qap_A 229 ADIIMLDN--FNTDQMREAVKRVNGQARLEV---S------------GNVT-----AETLREFAETGVDFISVGA 281 (296)
T ss_dssp CSEEEESS--CCHHHHHHHHHTTCTTCCEEE---C------------CCSC-----HHHHHHHHHTTCSEEECSH
T ss_pred CCEEEECC--CCHHHHHHHHHHhCCCCeEEE---E------------CCCC-----HHHHHHHHHcCCCEEEEeH
Confidence 99999987 3456666666655 356543 3 3455 4567789999999997754
No 362
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=39.10 E-value=13 Score=37.65 Aligned_cols=24 Identities=17% Similarity=0.344 Sum_probs=20.9
Q ss_pred chhhHHHHHHHHHHHhcccEeehh
Q 014237 391 DEQRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 391 D~~~~vlEsL~~~kRAGAd~IiTY 414 (428)
+..++|.+.+..+.+||||+|.|-
T Consensus 51 ~~Pe~V~~iH~~Yl~AGAdII~TN 74 (406)
T 1lt8_A 51 EHPEAVRQLHREFLRAGSNVMQTF 74 (406)
T ss_dssp HCHHHHHHHHHHHHHTTCSEEECS
T ss_pred cCHHHHHHHHHHHHHhCccceecc
Confidence 346799999999999999999873
No 363
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=38.99 E-value=1.1e+02 Score=30.32 Aligned_cols=180 Identities=14% Similarity=0.164 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecC---------C--CCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKV---------P--DALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSS 226 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi---------~--~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTs 226 (428)
...+.++.+.+.|...|-|-+-= | +...|+.|-.--|.--++...|+++|+++++--|..-+....+.
T Consensus 154 ~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~- 232 (362)
T 4ab4_A 154 AYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADA- 232 (362)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCS-
T ss_pred HHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccc-
Confidence 35566677889999999996531 2 23456666544344446678889999998632555555543321
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchh
Q 014237 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFR 306 (428)
Q Consensus 227 hGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFR 306 (428)
.|.- ...+++...+.|-.+.++|+|.|.-|.-+.|. .|..-+|
T Consensus 233 ---~g~~-------~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~---------------------------~~~~~ik 275 (362)
T 4ab4_A 233 ---HDMG-------DADRAETFTYVARELGKRGIAFICSREREADD---------------------------SIGPLIK 275 (362)
T ss_dssp ---SSCC-------CTTHHHHHHHHHHHHHHTTCSEEEEECCCCTT---------------------------CCHHHHH
T ss_pred ---cccC-------CCCcHHHHHHHHHHHHHhCCCEEEECCCCCCH---------------------------HHHHHHH
Confidence 1211 11234444555666788999999766533221 2334556
Q ss_pred hhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcC-CceEEe-cCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHH
Q 014237 307 EALDSNPRFGDKKTYQMNPANYREALVEAQADESEG-ADILLV-KPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAG 384 (428)
Q Consensus 307 dAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EG-ADilMV-KPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaA 384 (428)
++++ -|-.+.-. + +| ++ ++.-+++| ||+||+ .|.+.-=|+.+++++. .|+..|.-+-=|.-
T Consensus 276 ~~~~-iPvi~~Gg-i--t~---e~----a~~~l~~g~aD~V~iGR~~lanPdl~~k~~~g--~~l~~~d~~~~y~~---- 338 (362)
T 4ab4_A 276 EAFG-GPYIVNER-F--DK---AS----ANAALASGKADAVAFGVPFIANPDLPARLAAD--APLNEAHPETFYGK---- 338 (362)
T ss_dssp HHHC-SCEEEESS-C--CH---HH----HHHHHHTTSCSEEEESHHHHHCTTHHHHHHTT--CCCCCCCGGGSSSS----
T ss_pred HHCC-CCEEEeCC-C--CH---HH----HHHHHHcCCccEEEECHHhHhCcHHHHHHHcC--CCCCCCChhhccCC----
Confidence 6653 34432111 1 33 22 23334566 999987 4555556899999874 66666766655542
Q ss_pred HHCCCCch
Q 014237 385 GALKMIDE 392 (428)
Q Consensus 385 a~~G~iD~ 392 (428)
...|++|.
T Consensus 339 ~~~gy~dy 346 (362)
T 4ab4_A 339 GPVGYIDY 346 (362)
T ss_dssp SSTTTTCS
T ss_pred CCCCcccc
Confidence 34788885
No 364
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=38.81 E-value=85 Score=28.87 Aligned_cols=64 Identities=20% Similarity=0.245 Sum_probs=50.0
Q ss_pred CChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh--C-CCCeEEEEechHHHHHHHHHHCCCCch
Q 014237 326 ANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK--Y-PLPIAAYQVSGEYSMIKAGGALKMIDE 392 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~--~-~lPvaaYqVSGEYaMIkaAa~~G~iD~ 392 (428)
.|..||+..+. ++..|+|++= |++.=+++++.+|+. . .+|+....-.++......|.+.|..|.
T Consensus 50 ~~~~~al~~~~---~~~~dlvl~D~~mp~~~G~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~a~~~Ga~~~ 119 (358)
T 3bre_A 50 SDPQQAVAVAN---QIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLSTKEEPTVKSAAFAAGANDY 119 (358)
T ss_dssp CCHHHHHHHHH---HHCCSEEEEESBCSSSBHHHHHHHHTTSTTTTTSCEEEEESSCCHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHH---hCCCCEEEEeCCCCCCCHHHHHHHHhcCcccCCCcEEEEeCCCCHHHHHHHHhcChheE
Confidence 57888887664 3468999875 777778999999975 2 589998877778888888889997653
No 365
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=38.78 E-value=69 Score=29.57 Aligned_cols=41 Identities=20% Similarity=0.333 Sum_probs=26.8
Q ss_pred HHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehh
Q 014237 355 LDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 355 LDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTY 414 (428)
++.++++++.+++||.+ .|-|..-+-+.| +..+|||.|..+
T Consensus 230 ~~~i~~i~~~~~ipvia---------------~GGI~~~~d~~~----~l~~GAd~V~vg 270 (311)
T 1ep3_A 230 LKLIHQVAQDVDIPIIG---------------MGGVANAQDVLE----MYMAGASAVAVG 270 (311)
T ss_dssp HHHHHHHHTTCSSCEEE---------------CSSCCSHHHHHH----HHHHTCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEE---------------ECCcCCHHHHHH----HHHcCCCEEEEC
Confidence 68999999999999875 344422222333 334799988543
No 366
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=38.69 E-value=58 Score=30.83 Aligned_cols=166 Identities=14% Similarity=0.145 Sum_probs=91.8
Q ss_pred HHHHHHHHCCC--eEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC-----------
Q 014237 202 TIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM----------- 268 (428)
Q Consensus 202 AIr~iK~~~Pd--l~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM----------- 268 (428)
.+|.|++..|+ ++-+.|.+-+||-. -.-++=.++..+.+-.+.++|||+|.=..-
T Consensus 20 v~~~i~~~lP~~~~iy~~D~a~~PYG~------------ks~~~i~~~~~~~~~~L~~~g~~~IVIACNTa~~~al~~lr 87 (269)
T 3ist_A 20 VVREVLKQLPHEQVYYLGDTARCPYGP------------RDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALYDIR 87 (269)
T ss_dssp HHHHHHHHCTTCCEEEEECGGGCCCTT------------SCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCcEEEEeCCCCCCCCC------------CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCCccHHHHHHHH
Confidence 46778888995 88899999999922 222333344445555566788887742110
Q ss_pred ------CCchH-HHHHHHHHHCCCCCceeechhhhhccccccchhhhhcC--------CCCCCC-ccccCCCCCChHHHH
Q 014237 269 ------MDGRV-GAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDS--------NPRFGD-KKTYQMNPANYREAL 332 (428)
Q Consensus 269 ------MDGRV-~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~S--------ap~fgD-RktYQmdpaN~~EAl 332 (428)
.=|-| -+++.++...+..+|+||+=.+--.|.+|--.=...+. .|.+-. =..-+.+....++.+
T Consensus 88 ~~~~iPvigii~pa~~~A~~~~~~~~IGVLaT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lV~~vE~g~~~~~~~~~~l 167 (269)
T 3ist_A 88 EKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIAKKVV 167 (269)
T ss_dssp HHCSSCEEESHHHHHHHHHHHCSSSEEEEEECHHHHHHTHHHHHHHHHCTTCEEEEEECHHHHHHHHTTCTTSHHHHHHH
T ss_pred HhcCCCEEeecHHHHHHHHHHcCCCeEEEEeccchhhHHHHHHHHHHhCCCCEEeccCCHHHHHHHHcCCCCCHHHHHHH
Confidence 01433 37777887777788999988777777777432222210 111100 011122222456667
Q ss_pred HHHHhch-hcCCceEEecCCCchHHHHHHHHhhCC--CCeEEEEechHHHHHHHH
Q 014237 333 VEAQADE-SEGADILLVKPGLPYLDVIRLLRDKYP--LPIAAYQVSGEYSMIKAG 384 (428)
Q Consensus 333 rE~~lDi-~EGADilMVKPal~YLDII~~vk~~~~--lPvaaYqVSGEYaMIkaA 384 (428)
++....+ ++|+|.|+.== .-|-=+...+++.++ +|+ |.+-.++.+.+
T Consensus 168 ~~~l~~l~~~g~D~iVLGC-Th~pll~~~i~~~~~~~v~v----IDs~~~~a~~~ 217 (269)
T 3ist_A 168 AESLLPLKSTKIDTVILGC-THYPLLKPIIENFMGDGVAV----INSGEETASEV 217 (269)
T ss_dssp HHHHGGGGGSCCCEEEECS-TTGGGGHHHHHHHHCTTSEE----ECTHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEECC-CCHHHHHHHHHHHcCCCCeE----ECcHHHHHHHH
Confidence 7776666 46899877632 122223444555442 443 34444444443
No 367
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=38.35 E-value=1.9e+02 Score=27.16 Aligned_cols=107 Identities=16% Similarity=0.076 Sum_probs=63.4
Q ss_pred echhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCccee
Q 014237 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGI 232 (428)
Q Consensus 153 ~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGi 232 (428)
+-.+ .+.+.++.+.+.|+..+.+.|. +|+...=..-=-.+.++...+.... ||+
T Consensus 16 iD~~-~l~~lv~~li~~Gv~gl~v~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~g--vi~--------------- 69 (286)
T 2r91_A 16 LDPE-LFANHVKNITSKGVDVVFVAGT--------TGLGPALSLQEKMELTDAATSAARR--VIV--------------- 69 (286)
T ss_dssp ECHH-HHHHHHHHHHHTTCCEEEETST--------TTTGGGSCHHHHHHHHHHHHHHCSS--EEE---------------
T ss_pred cCHH-HHHHHHHHHHHCCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCC--EEE---------------
Confidence 3443 4888999999999999999995 2333221111234566666666555 332
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCee---cCCC----CCCchHHHHHHHHHHCCCCCceeechh
Q 014237 233 VREDGVIMNDETVHQLCKQAVSQARAGADVV---SPSD----MMDGRVGAIRAALDAEGFQHVSIMSYT 294 (428)
Q Consensus 233 l~~~g~IdND~Tl~~Lak~Als~A~AGADiV---APSD----MMDGRV~aIR~aLD~~Gf~~v~IMSYs 294 (428)
.-|...-.+|++ .+-..+++|||-| .|.= --+|-+...++..++. +++||=|-
T Consensus 70 --Gvg~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~---~lPiilYn 129 (286)
T 2r91_A 70 --QVASLNADEAIA----LAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAV---SIPVFLYN 129 (286)
T ss_dssp --ECCCSSHHHHHH----HHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred --eeCCCCHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 112223344543 3333467899965 3432 1266777777777665 57888875
No 368
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=38.33 E-value=46 Score=32.89 Aligned_cols=74 Identities=14% Similarity=0.226 Sum_probs=53.2
Q ss_pred hhcCCceEEec-----CCC------chHHHHHHHHhhCCCCeEEE---EechHHHHHHHHHHCC-----CCc---hhhHH
Q 014237 339 ESEGADILLVK-----PGL------PYLDVIRLLRDKYPLPIAAY---QVSGEYSMIKAGGALK-----MID---EQRVM 396 (428)
Q Consensus 339 i~EGADilMVK-----Pal------~YLDII~~vk~~~~lPvaaY---qVSGEYaMIkaAa~~G-----~iD---~~~~v 396 (428)
.++|||||=|. |+. -.+.+|+.+++.+++|+..- +.|=.-..+++|.+.| +|+ .++ .
T Consensus 91 ~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~~~~-~ 169 (323)
T 4djd_D 91 AEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAEQEN-Y 169 (323)
T ss_dssp HTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEBTTB-C
T ss_pred HHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECCccc-H
Confidence 48999999986 442 36778899999999999876 5566677888888877 221 221 1
Q ss_pred HHHHHHHHHhcccEeeh
Q 014237 397 MESLMCLRRAGADIILT 413 (428)
Q Consensus 397 lEsL~~~kRAGAd~IiT 413 (428)
-+.+...++.|+-+|+.
T Consensus 170 ~~m~~laa~~g~~vVlm 186 (323)
T 4djd_D 170 KSLTAACMVHKHNIIAR 186 (323)
T ss_dssp HHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHhCCeEEEE
Confidence 24455667889999985
No 369
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=38.28 E-value=56 Score=25.60 Aligned_cols=63 Identities=21% Similarity=0.209 Sum_probs=41.3
Q ss_pred CCChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCCCCeEEEEe--chHHHHHHHHHHCCC
Q 014237 325 PANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYPLPIAAYQV--SGEYSMIKAGGALKM 389 (428)
Q Consensus 325 paN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~lPvaaYqV--SGEYaMIkaAa~~G~ 389 (428)
..|..||+..+... ..-|+|++= |++.=+++++.+|+..+.|+...-. ..+...+..+.+.|.
T Consensus 45 ~~~~~~al~~l~~~--~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~iiil~~~~~~~~~~~~~~~~~ga 112 (145)
T 3kyj_B 45 AANGQEALDKLAAQ--PNVDLILLDIEMPVMDGMEFLRHAKLKTRAKICMLSSVAVSGSPHAARARELGA 112 (145)
T ss_dssp ESSHHHHHHHHHHC--TTCCEEEECTTSCCCTTCHHHHHHHHHCCCEEC-CBSSCSTTSSHHHHHHHTTC
T ss_pred ECCHHHHHHHHhcC--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEeccCChHHHHHHHhCCC
Confidence 45778888776532 158999986 5666789999999988888776655 222333444555554
No 370
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=38.13 E-value=45 Score=37.92 Aligned_cols=215 Identities=14% Similarity=0.096 Sum_probs=123.9
Q ss_pred HHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeec-CCC
Q 014237 159 LVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVR-EDG 237 (428)
Q Consensus 159 l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~-~~g 237 (428)
..+.++.+.+.|+.-|-+|-.+. |- -....+++.+|+.. -++-.++|.+.+ .++ ++.
T Consensus 629 ~~~~v~~a~~~Gvd~irif~~~s----d~---------~~~~~~~~~~~e~g----~~~~~~i~~~~~-----~~~pe~~ 686 (1150)
T 3hbl_A 629 IHKFVQESAKAGIDVFRIFDSLN----WV---------DQMKVANEAVQEAG----KISEGTICYTGD-----ILNPERS 686 (1150)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTC----CG---------GGGHHHHHHHHHTT----CEEEEEEECCSC-----TTCTTTC
T ss_pred HHHHHHHHHhCCcCEEEEEeeCC----HH---------HHHHHHHHHHHHHh----hheeEEEeeccc-----ccChhhc
Confidence 55679999999999998885422 11 12356777777763 344466666532 232 122
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC--------chHHHHHHHHHHC-CC--CCceeechhhhhccccccchh
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPSDMMD--------GRVGAIRAALDAE-GF--QHVSIMSYTAKYASSFYGPFR 306 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD--------GRV~aIR~aLD~~-Gf--~~v~IMSYsaKyASafYGPFR 306 (428)
.. .|++.+.+.+-...++|||+|+-.||.= -.|.++|+.++-. ++ +|+.=|+.+.-.+..-.|-=
T Consensus 687 ~~---~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G~a~An~laA~~aGa~- 762 (1150)
T 3hbl_A 687 NI---YTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAVDLPIHLHTHDTSGNGLLTYKQAIDAGVD- 762 (1150)
T ss_dssp SS---SSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHCCSCEEEEECBTTSCHHHHHHHHHHTTCS-
T ss_pred CC---CCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCCcHHHHHHHHHHHhCCC-
Confidence 22 4566777777777899999999999875 2566777765211 11 55555777776666666642
Q ss_pred hhhcCCCC-CCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCch------HHHHHHHHhh---CCCC-------e
Q 014237 307 EALDSNPR-FGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPY------LDVIRLLRDK---YPLP-------I 369 (428)
Q Consensus 307 dAa~Sap~-fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y------LDII~~vk~~---~~lP-------v 369 (428)
.++++-. +| .+++|- .-|.+..+.... |-| +++-. -+.+.+++.. |.-+ |
T Consensus 763 -~vD~ai~GlG-~~~gn~----~lE~lv~~L~~~--g~~-----tgidl~~l~~~~~~~~~~~~~y~~~~~~~~~~~~~v 829 (1150)
T 3hbl_A 763 -IIDTAVASMS-GLTSQP----SANSLYYALNGF--PRH-----LRTDIEGMESLSHYWSTVRTYYSDFESDIKSPNTEI 829 (1150)
T ss_dssp -EEEEBCGGGC-SBTSCC----BHHHHHHHTTTS--SCC-----BCSCHHHHHHHHHHHHHHHGGGGGGCCSCCSCCTTH
T ss_pred -EEEEeccccC-CCCCCc----cHHHHHHHHHhc--CCC-----cCccHHHHHHHHHHHHHHHhhhccccCCCCCCccce
Confidence 3444433 44 446654 234444433321 322 33311 1223444443 2221 5
Q ss_pred EEEEech-HH-HHHHHHHHCCCCchhhHHHHHHHHHHHhcccEee
Q 014237 370 AAYQVSG-EY-SMIKAGGALKMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 370 aaYqVSG-EY-aMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
.-||+-| -| .|...+.+.|+.|.=.-|+|.+-..++-.-+++.
T Consensus 830 ~~~~~PGg~~snl~~q~~~~g~~~~~~~v~~~~~~v~~~~g~~~~ 874 (1150)
T 3hbl_A 830 YQHEMPGGQYSNLSQQAKSLGLGERFDEVKDMYRRVNFLFGDIVK 874 (1150)
T ss_dssp HHHCCCSSHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTSCCC
T ss_pred EEeeCCCchhhHHHHHHHHCCcHhHHHHHHHHHHHHHHHcCCCce
Confidence 5567776 34 4555688999999766666666666555555553
No 371
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=38.13 E-value=38 Score=33.22 Aligned_cols=50 Identities=18% Similarity=0.232 Sum_probs=36.3
Q ss_pred cCCCCC--ChHHHHHHHHhchhcCCceEEecCCC--c-----hHHHHHHHHhhCCCCeEE
Q 014237 321 YQMNPA--NYREALVEAQADESEGADILLVKPGL--P-----YLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 321 YQmdpa--N~~EAlrE~~lDi~EGADilMVKPal--~-----YLDII~~vk~~~~lPvaa 371 (428)
--+||. +.+++...++.=.+.|+|.|||= .+ . -.+++.++|+.+++|+.-
T Consensus 43 ~liDPdK~~~~~~~~~~~~~~~sGtDai~VG-S~~vt~~~~~~~~~v~~ik~~~~lPvil 101 (286)
T 3vk5_A 43 HIIDPFKVPVTEAVEKAAELTRLGFAAVLLA-STDYESFESHMEPYVAAVKAATPLPVVL 101 (286)
T ss_dssp EEECTTTSCHHHHHHHHHHHHHTTCSCEEEE-CSCCSSHHHHHHHHHHHHHHHCSSCEEE
T ss_pred EEECCCCCCcHHHHHHHHHHHhcCCCEEEEc-cCCCCcchHHHHHHHHHHHHhCCCCEEE
Confidence 356785 35565444443356799999999 75 2 367899999999999987
No 372
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=38.02 E-value=86 Score=28.02 Aligned_cols=91 Identities=10% Similarity=0.123 Sum_probs=57.6
Q ss_pred CChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechH--HHHHHHHHHCC----C----------
Q 014237 326 ANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGE--YSMIKAGGALK----M---------- 389 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGE--YaMIkaAa~~G----~---------- 389 (428)
++-+|++..+..= ++|+|+++--=+.+ +. +|+.+++||.--++||. ...++.|-+.+ +
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRGgta--~~---lr~~~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~ 109 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRGATS--DY---IKKSVSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDK 109 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEHHHH--HH---HHTTCSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCH
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECChHH--HH---HHHhCCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHH
Confidence 5678888887765 79999988765532 33 44567788888888874 22233332221 0
Q ss_pred ---------------CchhhHHHHHHHHHHHhcccEeehh-cHHHHHHH
Q 014237 390 ---------------IDEQRVMMESLMCLRRAGADIILTY-FALQAARC 422 (428)
Q Consensus 390 ---------------iD~~~~vlEsL~~~kRAGAd~IiTY-fA~e~a~w 422 (428)
++...-+.+.+..+++.|+++||.- .+.++|+-
T Consensus 110 ~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~~~~~A~~ 158 (196)
T 2q5c_A 110 HEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKTVTDEAIK 158 (196)
T ss_dssp HHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHHHHHHHHH
T ss_pred HHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHHHHHHHHH
Confidence 1112345778888999999999853 44555553
No 373
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=37.80 E-value=1.3e+02 Score=22.78 Aligned_cols=58 Identities=12% Similarity=0.140 Sum_probs=37.3
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh--C-CCCeEEEEechHHHHHHHHHHCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK--Y-PLPIAAYQVSGEYSMIKAGGALK 388 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~--~-~lPvaaYqVSGEYaMIkaAa~~G 388 (428)
|..||+..+. ++.-|+|++- |++.-+++++.+|+. + .+|+....-..+-.. ..+.+.|
T Consensus 35 ~~~~a~~~l~---~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~-~~~~~~g 98 (133)
T 3nhm_A 35 DGASGLQQAL---AHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTE-GPADQPV 98 (133)
T ss_dssp SHHHHHHHHH---HSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC------TTSCC
T ss_pred CHHHHHHHHh---cCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhH-HHHhhcC
Confidence 6677776654 3568999997 556679999999986 2 689888764433333 3344444
No 374
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=37.80 E-value=62 Score=32.79 Aligned_cols=47 Identities=19% Similarity=0.297 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEe
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vit 217 (428)
...+.++.+++.|+..|.|-.. .|.. ......|+.||+.+|++.|+.
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~--------~G~~-----~~~~~~i~~i~~~~~~~pvi~ 301 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSS--------QGNS-----VYQIAMVHYIKQKYPHLQVIG 301 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCS--------CCCS-----HHHHHHHHHHHHHCTTCEEEE
T ss_pred hhHHHHHHHHHcCCCEEEeecc--------CCcc-----hhHHHHHHHHHHhCCCCceEe
Confidence 4688999999999998877221 1211 134578999999999988885
No 375
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=37.54 E-value=32 Score=33.67 Aligned_cols=107 Identities=15% Similarity=0.131 Sum_probs=63.9
Q ss_pred echhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcc-------cCcCcCCC---------CCHH---HHHHHHHHHCCCe
Q 014237 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPT-------GDEAYNDN---------GLVP---RTIWLLKDRYPDL 213 (428)
Q Consensus 153 ~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~-------Gs~A~~~~---------g~v~---rAIr~iK~~~Pdl 213 (428)
++++ ++.+++..+.++|+++|-|-|+.+ ..++.. +...|++- |-.. +.|+.++++ .|
T Consensus 14 ~~~~-~i~~~l~yl~~lG~~~i~l~Pi~~-~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~lv~~~h~~--Gi 89 (422)
T 1ua7_A 14 WSFN-TLKHNMKDIHDAGYTAIQTSPINQ-VKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEY--GI 89 (422)
T ss_dssp BCHH-HHHHTHHHHHHTTCSEEEECCCEE-ECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTT--TC
T ss_pred CCHH-HHHHHHHHHHHcCCCEEEeCCccc-cccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHHHHHHHHC--CC
Confidence 4675 699999999999999999988422 112221 13344432 3333 444444443 79
Q ss_pred EEEeeecccCCCCCCc----------------ceeec-CC----------C----ccccHHHHHHHHHHHHHHHHcCCCe
Q 014237 214 VIYTDVALDPYSSDGH----------------DGIVR-ED----------G----VIMNDETVHQLCKQAVSQARAGADV 262 (428)
Q Consensus 214 ~VitDVcLc~YTshGH----------------cGil~-~~----------g----~IdND~Tl~~Lak~Als~A~AGADi 262 (428)
-||.|+-+-......+ |.+-+ .+ | .-.|.+..+.|.+...-..+.|+|-
T Consensus 90 ~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~gvDG 169 (422)
T 1ua7_A 90 KVIVDAVINHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLERALNDGADG 169 (422)
T ss_dssp EEEEEECCSBCCSCTTTSCHHHHTSTTCEEECCBCCCTTCHHHHHHSBBTTBCEECTTSHHHHHHHHHHHHHHHHTTCCE
T ss_pred EEEEEeccCcccCCccccCccccCCcccccCCCCCCCcCchhcccccccCCCCccccCCHHHHHHHHHHHHHHHHcCCCE
Confidence 9999998765432211 11110 00 1 1236677888888888888889865
Q ss_pred e
Q 014237 263 V 263 (428)
Q Consensus 263 V 263 (428)
+
T Consensus 170 f 170 (422)
T 1ua7_A 170 F 170 (422)
T ss_dssp E
T ss_pred E
Confidence 4
No 376
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=37.49 E-value=77 Score=31.31 Aligned_cols=53 Identities=19% Similarity=0.271 Sum_probs=40.1
Q ss_pred ccCCCCCChHHHHHHHHhchhcCCceEEecCCCch-------------HHHHHHHHhhCCCCeEEEEech
Q 014237 320 TYQMNPANYREALVEAQADESEGADILLVKPGLPY-------------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 320 tYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-------------LDII~~vk~~~~lPvaaYqVSG 376 (428)
.--||.-|.+.|--. .+-||.-||+==+.|. ++.|+++++...+||.+=-=-|
T Consensus 13 ~vimdv~~~eqa~ia----e~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aVsIPVm~k~rig 78 (291)
T 3o07_A 13 GVIMDVVTPEQAKIA----EKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSVSIPVMAKVRIG 78 (291)
T ss_dssp CEEEEESSHHHHHHH----HHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTCSSCEEEEEETT
T ss_pred CeeeecCCHHHHHHH----HHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhCCCCeEEEEecC
Confidence 445788888776432 3459999999855554 9999999999999999864433
No 377
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=37.33 E-value=70 Score=28.75 Aligned_cols=85 Identities=19% Similarity=0.173 Sum_probs=50.9
Q ss_pred CCCChHHHHHHHHhchhcCCceE--Eec-----CCCch-HHHHHHHHhhCC----CCeEEEEechHHHHHHHHHHCC--C
Q 014237 324 NPANYREALVEAQADESEGADIL--LVK-----PGLPY-LDVIRLLRDKYP----LPIAAYQVSGEYSMIKAGGALK--M 389 (428)
Q Consensus 324 dpaN~~EAlrE~~lDi~EGADil--MVK-----Pal~Y-LDII~~vk~~~~----lPvaaYqVSGEYaMIkaAa~~G--~ 389 (428)
|..|..|.++++ ++-|||+| -+| |.+.+ +++++++|+.++ +++..++ .++| ++.+.+.| +
T Consensus 17 d~~~l~~~i~~~---~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d-~~~~--i~~~~~agad~ 90 (228)
T 1h1y_A 17 DFANLAAEADRM---VRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTN-PSDY--VEPLAKAGASG 90 (228)
T ss_dssp CGGGHHHHHHHH---HHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSC-GGGG--HHHHHHHTCSE
T ss_pred CHHHHHHHHHHH---HHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecC-HHHH--HHHHHHcCCCE
Confidence 456777777666 35689984 444 44433 799999998764 4455665 4566 33333333 2
Q ss_pred C---ch--hhHHHHHHHHHHHhcccEeehh
Q 014237 390 I---DE--QRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 390 i---D~--~~~vlEsL~~~kRAGAd~IiTY 414 (428)
+ ++ +..+.+.+..++..|..++++-
T Consensus 91 v~vH~~~~~~~~~~~~~~i~~~g~~igv~~ 120 (228)
T 1h1y_A 91 FTFHIEVSRDNWQELIQSIKAKGMRPGVSL 120 (228)
T ss_dssp EEEEGGGCTTTHHHHHHHHHHTTCEEEEEE
T ss_pred EEECCCCcccHHHHHHHHHHHcCCCEEEEE
Confidence 2 11 1222566777787887777654
No 378
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=37.27 E-value=41 Score=31.79 Aligned_cols=48 Identities=25% Similarity=0.326 Sum_probs=33.4
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCCch--------HHHHHHHHhhCCCCeEEEEech
Q 014237 327 NYREALVEAQADESEGADILLVKPGLPY--------LDVIRLLRDKYPLPIAAYQVSG 376 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal~Y--------LDII~~vk~~~~lPvaaYqVSG 376 (428)
|.+|+++.+..=.+-|||.+||=|-..| .+=.+.+.+ ++|+..||+-|
T Consensus 73 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~--~lPiilYn~P~ 128 (283)
T 2pcq_A 73 TLPQAEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE--KMPLFLYHVPQ 128 (283)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH--HSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc--CCCEEEEeCcc
Confidence 6788888777666779999999554321 122235555 89999999754
No 379
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=37.26 E-value=59 Score=32.47 Aligned_cols=75 Identities=25% Similarity=0.274 Sum_probs=54.0
Q ss_pred hhcCCceEEec-C------------CCchHHHHHHHHhhCCCCeEEEEech---HHHHHHHHHHCCCCchh---------
Q 014237 339 ESEGADILLVK-P------------GLPYLDVIRLLRDKYPLPIAAYQVSG---EYSMIKAGGALKMIDEQ--------- 393 (428)
Q Consensus 339 i~EGADilMVK-P------------al~YLDII~~vk~~~~lPvaaYqVSG---EYaMIkaAa~~G~iD~~--------- 393 (428)
.+.||+.||+= | =|...+.|+++++..++||-+=-=-| ||..+.+ +-.-.||+.
T Consensus 34 e~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~I~~av~iPV~~K~rig~~~e~qilea-~GaD~Id~s~~l~p~d~~ 112 (330)
T 2yzr_A 34 EEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAVSIPVMAKCRIGHTTEALVLEA-IGVDMIDESEVLTQADPF 112 (330)
T ss_dssp HHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHHCSSCEEEEEETTCHHHHHHHHH-TTCSEEEEETTSCCSCSS
T ss_pred HHcCCCEEEecCCccccccCCcchhhcCCHHHHHHHHHhcCCCeEEEEeecchHHHHHHHH-cCCCEEehhccCCHHHHH
Confidence 34799999984 2 24579999999999999998865554 5555555 334444431
Q ss_pred -h---------------HHHHHHHHHHHhcccEeehhc
Q 014237 394 -R---------------VMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 394 -~---------------~vlEsL~~~kRAGAd~IiTYf 415 (428)
. -+-|.+..+ .+||++|-|..
T Consensus 113 ~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~g 149 (330)
T 2yzr_A 113 FHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKG 149 (330)
T ss_dssp CCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECC
T ss_pred HHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccC
Confidence 1 267888888 89999998877
No 380
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=37.19 E-value=45 Score=31.17 Aligned_cols=45 Identities=7% Similarity=-0.003 Sum_probs=32.2
Q ss_pred HHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 355 LDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 355 LDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
.+||+.+|+..++||..= ++.. | |.+ -+.|....+.++|+|.|+.
T Consensus 147 ~~iv~~vr~~~~~Pv~vK-i~~~-----------~-~~~-~~~~~a~~~~~~G~d~i~v 191 (311)
T 1jub_A 147 EKLLKEVFTFFTKPLGVK-LPPY-----------F-DLV-HFDIMAEILNQFPLTYVNS 191 (311)
T ss_dssp HHHHHHHTTTCCSCEEEE-ECCC-----------C-SHH-HHHHHHHHHTTSCCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEE-ECCC-----------C-CHH-HHHHHHHHHHHcCCcEEEe
Confidence 589999999999999863 3322 3 433 3566677788899998753
No 381
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=37.11 E-value=25 Score=33.12 Aligned_cols=90 Identities=20% Similarity=0.331 Sum_probs=58.1
Q ss_pred ccCCCCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEee--e-
Q 014237 143 PIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTD--V- 219 (428)
Q Consensus 143 ~I~SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitD--V- 219 (428)
.+..|||+. -..|+..++++|...|.+||. . ..| | ...|+.|+..||++-+++= |
T Consensus 127 gi~~ipGv~-------TptEi~~A~~~Gad~vK~FPa-~-----~~g-------G--~~~lkal~~p~p~ip~~ptGGI~ 184 (232)
T 4e38_A 127 GIDIVPGVN-------NPSTVEAALEMGLTTLKFFPA-E-----ASG-------G--ISMVKSLVGPYGDIRLMPTGGIT 184 (232)
T ss_dssp TCEEECEEC-------SHHHHHHHHHTTCCEEEECST-T-----TTT-------H--HHHHHHHHTTCTTCEEEEBSSCC
T ss_pred CCCEEcCCC-------CHHHHHHHHHcCCCEEEECcC-c-----ccc-------C--HHHHHHHHHHhcCCCeeeEcCCC
Confidence 678899973 267889999999999999994 1 111 2 3789999999999776642 2
Q ss_pred --cccCCCCCCcceeecCCCccc--------cHHHHHHHHHHHHHH
Q 014237 220 --ALDPYSSDGHDGIVREDGVIM--------NDETVHQLCKQAVSQ 255 (428)
Q Consensus 220 --cLc~YTshGHcGil~~~g~Id--------ND~Tl~~Lak~Als~ 255 (428)
.+.+|-..|=.+.+- .+.+. |=+.+..++++++..
T Consensus 185 ~~n~~~~l~aGa~~~vg-Gs~l~~~~~i~~~~~~~i~~~a~~~~~~ 229 (232)
T 4e38_A 185 PSNIDNYLAIPQVLACG-GTWMVDKKLVTNGEWDEIARLTREIVEQ 229 (232)
T ss_dssp TTTHHHHHTSTTBCCEE-ECGGGCHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEE-CchhcChHHhhcCCHHHHHHHHHHHHHH
Confidence 244565666444332 12221 224566677766654
No 382
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=36.96 E-value=35 Score=31.64 Aligned_cols=59 Identities=22% Similarity=0.334 Sum_probs=0.0
Q ss_pred HHHhchhc--CCceE---EecC---CCch----HHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHH
Q 014237 334 EAQADESE--GADIL---LVKP---GLPY----LDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESL 400 (428)
Q Consensus 334 E~~lDi~E--GADil---MVKP---al~Y----LDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL 400 (428)
|....+.+ ++|+| -|-| +..+ ||-|+++|+.. ++++.+ -|-|+.+ ++
T Consensus 128 ~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~V---------------dGGI~~~-----ti 187 (227)
T 1tqx_A 128 QKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQV---------------DGGLNIE-----TT 187 (227)
T ss_dssp GGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEE---------------ESSCCHH-----HH
T ss_pred HHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhccCCeEEE---------------ECCCCHH-----HH
Q ss_pred HHHHHhcccEee
Q 014237 401 MCLRRAGADIIL 412 (428)
Q Consensus 401 ~~~kRAGAd~Ii 412 (428)
..++.||||+++
T Consensus 188 ~~~~~aGAd~~V 199 (227)
T 1tqx_A 188 EISASHGANIIV 199 (227)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHcCCCEEE
No 383
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=36.95 E-value=42 Score=30.57 Aligned_cols=117 Identities=14% Similarity=0.116 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHCCC-CCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecC
Q 014237 272 RVGAIRAALDAEGF-QHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKP 350 (428)
Q Consensus 272 RV~aIR~aLD~~Gf-~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKP 350 (428)
-+..+-+.|.+.|+ .+|.|.||....-. -+|.. .|.. +..|-....+..+ ++ .-|++.+-...
T Consensus 116 ~~~~v~~~l~~~~~~~~v~~~Sf~~~~l~----~~~~~---~p~~--~~~~l~~~~~~~~-~~------~~~~~~~~~~~ 179 (238)
T 3no3_A 116 AARLSVQMVKRMKLAKRTDYISFNMDACK----EFIRL---CPKS--EVSYLNGELSPME-LK------ELGFTGLDYHY 179 (238)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEESCHHHHH----HHHHH---CTTS--CEEECSSCSCHHH-HH------HTTCCEEEEEH
T ss_pred HHHHHHHHHHHcCCcCCEEEEECCHHHHH----HHHHH---CCCC--eEEEEeCCCCHHH-HH------HCCCceEeccH
Confidence 45666777778887 45777777543221 12222 2331 2223222222222 21 23666554322
Q ss_pred CCch--HHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhcHHHHHHHHhc
Q 014237 351 GLPY--LDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCG 425 (428)
Q Consensus 351 al~Y--LDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYfA~e~a~wL~~ 425 (428)
.... -+.|+++++ .+++|.+|-| |.. +.+..+.+.|+|.|||-+-..+.++|++
T Consensus 180 ~~~~~~~~~v~~~~~-~G~~v~~WTV----------------n~~----~~~~~l~~~GVdgIiTD~P~~~~~~l~~ 235 (238)
T 3no3_A 180 KVLQSHPDWVKDCKV-LGMTSNVWTV----------------DDP----KLMEEMIDMGVDFITTDLPEETQKILHS 235 (238)
T ss_dssp HHHHHSTTHHHHHHH-TTCEEEEECC----------------CSH----HHHHHHHHHTCSEEEESCHHHHHHHHHH
T ss_pred HhhhCCHHHHHHHHH-CCCEEEEECC----------------CCH----HHHHHHHHcCCCEEECCCHHHHHHHHHh
Confidence 2111 146666664 5789999987 332 3455667789999999999999898865
No 384
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=36.93 E-value=1.1e+02 Score=27.99 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=25.1
Q ss_pred HHHHhch-hcCCceEEecCCCchHHHHHHHHhhCCCCeEE
Q 014237 333 VEAQADE-SEGADILLVKPGLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 333 rE~~lDi-~EGADilMVKPal~YLDII~~vk~~~~lPvaa 371 (428)
.+..... +-||..+-+ .-++-|+++|+.+++||..
T Consensus 39 ~~~A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~~Pvig 74 (232)
T 3igs_A 39 AAMALAAEQAGAVAVRI----EGIDNLRMTRSLVSVPIIG 74 (232)
T ss_dssp HHHHHHHHHTTCSEEEE----ESHHHHHHHHTTCCSCEEE
T ss_pred HHHHHHHHHCCCeEEEE----CCHHHHHHHHHhcCCCEEE
Confidence 3344444 458988877 3578899999999999864
No 385
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=36.84 E-value=52 Score=27.98 Aligned_cols=75 Identities=8% Similarity=0.147 Sum_probs=53.2
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCch------hhHH
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDE------QRVM 396 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~------~~~v 396 (428)
+..||+... +..|+|++= |++.-+++++.+++.. .+|+....-..+...+..+.+.|..|. .+.+
T Consensus 33 ~~~~al~~~-----~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L 107 (220)
T 1p2f_A 33 TGEDFLNDE-----EAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVTKPFNPEIL 107 (220)
T ss_dssp SHHHHHHCC-----SCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHH
T ss_pred CHHHHHHhc-----CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHcCCCEEEECCCCHHHH
Confidence 455665432 568998875 6667799999999885 699999888787777788888776542 2345
Q ss_pred HHHHHHHHHh
Q 014237 397 MESLMCLRRA 406 (428)
Q Consensus 397 lEsL~~~kRA 406 (428)
.+.+..+.+-
T Consensus 108 ~~~i~~~~~~ 117 (220)
T 1p2f_A 108 LARVKRFLER 117 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHcc
Confidence 5555555443
No 386
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=36.79 E-value=17 Score=33.24 Aligned_cols=55 Identities=25% Similarity=0.240 Sum_probs=37.8
Q ss_pred hhcCCceE---EecCC---C----chHHHHHHHHhhC-----CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHH
Q 014237 339 ESEGADIL---LVKPG---L----PYLDVIRLLRDKY-----PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCL 403 (428)
Q Consensus 339 i~EGADil---MVKPa---l----~YLDII~~vk~~~-----~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~ 403 (428)
+.+|+|+| -|-|+ . .-++-|+++|+.. ++|+.+ -|-|+.+ .+..+
T Consensus 131 ~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v---------------~GGI~~~-----~~~~~ 190 (230)
T 1tqj_A 131 VLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEV---------------DGGLKPN-----NTWQV 190 (230)
T ss_dssp TGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEE---------------ESSCCTT-----TTHHH
T ss_pred HHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEE---------------ECCcCHH-----HHHHH
Confidence 45688988 35554 1 1378888888876 788765 4667653 44567
Q ss_pred HHhcccEeeh
Q 014237 404 RRAGADIILT 413 (428)
Q Consensus 404 kRAGAd~IiT 413 (428)
+.||||.++.
T Consensus 191 ~~aGad~vvv 200 (230)
T 1tqj_A 191 LEAGANAIVA 200 (230)
T ss_dssp HHHTCCEEEE
T ss_pred HHcCCCEEEE
Confidence 8899999874
No 387
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=36.65 E-value=90 Score=29.18 Aligned_cols=87 Identities=18% Similarity=0.138 Sum_probs=54.9
Q ss_pred cCCCCCHHHHHHHHHHHCCCeEEEeeec-----ccCCCCCCcceeecCCCcc--ccHHHHHHHHHHHHHHHHcCCCeecC
Q 014237 193 YNDNGLVPRTIWLLKDRYPDLVIYTDVA-----LDPYSSDGHDGIVREDGVI--MNDETVHQLCKQAVSQARAGADVVSP 265 (428)
Q Consensus 193 ~~~~g~v~rAIr~iK~~~Pdl~VitDVc-----Lc~YTshGHcGil~~~g~I--dND~Tl~~Lak~Als~A~AGADiVAP 265 (428)
-|++.+..+|+++|++. |+++. |.- |..+ .. ++-++.- |+- ....+.+.+.+..+.+++.|-+|+=-
T Consensus 25 Gd~~lLTl~A~~~L~~A--DvV~~-d~~~~~~ll~~~-~~-~~~~~~~-~k~~~~~~~~~~~i~~~l~~~~~~G~~Vv~L 98 (280)
T 1s4d_A 25 GDPGLLTLHAANALRQA--DVIVH-DALVNEDCLKLA-RP-GAVLEFA-GKRGGKPSPKQRDISLRLVELARAGNRVLRL 98 (280)
T ss_dssp SCTTSSBHHHHHHHHHC--SEEEE-CSCSCTTGGGGS-ST-TCCEEEC-SCCC--CCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHhC--CEEEE-cCCCCHHHHHhc-cC-CCEEEec-cccccccccCHHHHHHHHHHHHhCCCeEEEE
Confidence 57889999999999986 66664 321 1111 11 1112210 110 11234566777778889999888877
Q ss_pred CC---CCCchHHHHHHHHHHCCC
Q 014237 266 SD---MMDGRVGAIRAALDAEGF 285 (428)
Q Consensus 266 SD---MMDGRV~aIR~aLD~~Gf 285 (428)
++ +.=|+-+.+.+.|.++|+
T Consensus 99 ~~GDP~i~g~g~~l~~~l~~~gi 121 (280)
T 1s4d_A 99 KGGDPFVFGRGGEEALTLVEHQV 121 (280)
T ss_dssp ESBCTTSSSSHHHHHHHHHTTTC
T ss_pred cCCCCccccCHHHHHHHHHHCCC
Confidence 66 233888899999999986
No 388
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=36.62 E-value=85 Score=27.89 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=24.9
Q ss_pred hhcCCceEEe------cC-CCchHHHHHHHHhhC-CCCeEE
Q 014237 339 ESEGADILLV------KP-GLPYLDVIRLLRDKY-PLPIAA 371 (428)
Q Consensus 339 i~EGADilMV------KP-al~YLDII~~vk~~~-~lPvaa 371 (428)
++.|||+|.+ .| +..-.++|+.+|+.+ +.++..
T Consensus 98 ~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~ 138 (234)
T 1yxy_A 98 AALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMA 138 (234)
T ss_dssp HTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEE
T ss_pred HHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEE
Confidence 5789999987 34 235579999999988 566554
No 389
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=36.59 E-value=32 Score=26.04 Aligned_cols=50 Identities=24% Similarity=0.312 Sum_probs=37.2
Q ss_pred CCceEEec---CCCchHHHHHHHHhhC---CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 342 GADILLVK---PGLPYLDVIRLLRDKY---PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 342 GADilMVK---Pal~YLDII~~vk~~~---~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
.-|++++= |++.-+++++.+++.. .+|+....-+++......+.+.|..|
T Consensus 46 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~ 101 (127)
T 2jba_A 46 WPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVVMLTARGEEEDRVRGLETGADD 101 (127)
T ss_dssp CCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEEEEEETTHHHHHHTTCCCSCSE
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHhcCCCe
Confidence 45777764 6667789999999863 68999988777777666666666654
No 390
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=36.54 E-value=1e+02 Score=26.59 Aligned_cols=64 Identities=13% Similarity=0.076 Sum_probs=48.8
Q ss_pred CCChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 325 PANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 325 paN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
..|..||+..+.. ...|+|++= |++.=+++++.+++.. .+|+..+.-..+-..+..+.+.|..|
T Consensus 33 ~~~~~~al~~l~~---~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~ 100 (225)
T 3c3w_A 33 AGSVAEAMARVPA---ARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSYTSDEAMLDAILAGASG 100 (225)
T ss_dssp ESSHHHHHHHHHH---HCCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGGSSSHHHHHHHHHHTCCC
T ss_pred ECCHHHHHHHHhh---cCCCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHHCCCCE
Confidence 4467788776643 458999875 6777799999999877 59999887766677777777888755
No 391
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=36.47 E-value=1.2e+02 Score=27.98 Aligned_cols=121 Identities=13% Similarity=0.191 Sum_probs=70.8
Q ss_pred CCceeechhhhhccccccchhhhhcCCCCCCCccccCCCC--CChHHHHHHHHhchh-cCCceEEecCCCchHHHHHHHH
Q 014237 286 QHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNP--ANYREALVEAQADES-EGADILLVKPGLPYLDVIRLLR 362 (428)
Q Consensus 286 ~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdp--aN~~EAlrE~~lDi~-EGADilMVKPal~YLDII~~vk 362 (428)
.-+-|++|+- +..-|++++. .+..+- .+.. ++-+|++..+..=++ +|+|+++--=+.+ +. +|
T Consensus 14 ~ii~i~~~~~-----L~~~~~~i~~---e~~~~~--~I~vi~~~le~av~~a~~~~~~~~~dVIISRGgta--~~---Lr 78 (225)
T 2pju_A 14 PVIWTVSVTR-----LFELFRDISL---EFDHLA--NITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNG--AY---LK 78 (225)
T ss_dssp CEEEEECCHH-----HHHHHHHHHT---TTTTTC--EEEEECCCHHHHHHHHHHHTTTSCCSEEEEEHHHH--HH---HH
T ss_pred CEEEEEchHH-----HHHHHHHHHH---hhCCCc--eEEEecCcHHHHHHHHHHHHhcCCCeEEEeCChHH--HH---HH
Confidence 3466777754 5667888774 222221 1333 678899988876556 5799888665432 22 34
Q ss_pred hhCCCCeEEEEechHHHHHHHHHHCCC--------------------------------CchhhHHHHHHHHHHHhcccE
Q 014237 363 DKYPLPIAAYQVSGEYSMIKAGGALKM--------------------------------IDEQRVMMESLMCLRRAGADI 410 (428)
Q Consensus 363 ~~~~lPvaaYqVSGEYaMIkaAa~~G~--------------------------------iD~~~~vlEsL~~~kRAGAd~ 410 (428)
+.+++||.--++||. -++++-.++.- ++..+-+-+.+..+++.|+++
T Consensus 79 ~~~~iPVV~I~vs~~-Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~v 157 (225)
T 2pju_A 79 SRLSVPVILIKPSGY-DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEA 157 (225)
T ss_dssp TTCSSCEEEECCCHH-HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCE
T ss_pred hhCCCCEEEecCCHH-HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCE
Confidence 456677777777663 33333221111 112335577888889999999
Q ss_pred eehh-cHHHHHHH
Q 014237 411 ILTY-FALQAARC 422 (428)
Q Consensus 411 IiTY-fA~e~a~w 422 (428)
||.- .+.++|+-
T Consensus 158 VVG~~~~~~~A~~ 170 (225)
T 2pju_A 158 VVGAGLITDLAEE 170 (225)
T ss_dssp EEESHHHHHHHHH
T ss_pred EECCHHHHHHHHH
Confidence 8853 44555543
No 392
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=36.23 E-value=68 Score=31.53 Aligned_cols=37 Identities=24% Similarity=0.447 Sum_probs=28.1
Q ss_pred chhcCCceEEecC--CC--chHHHHHHHHhhC-CCCeEEEEe
Q 014237 338 DESEGADILLVKP--GL--PYLDVIRLLRDKY-PLPIAAYQV 374 (428)
Q Consensus 338 Di~EGADilMVKP--al--~YLDII~~vk~~~-~lPvaaYqV 374 (428)
=++.|+|+|-+=. +. ..+++|+.+|+.+ ++||.+-+|
T Consensus 161 ~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v 202 (404)
T 1eep_A 161 LVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNI 202 (404)
T ss_dssp HHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCC
Confidence 3578999998732 22 3689999999999 899997444
No 393
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=35.99 E-value=28 Score=32.60 Aligned_cols=46 Identities=13% Similarity=0.099 Sum_probs=32.7
Q ss_pred CCCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhhCCCCeEE
Q 014237 322 QMNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 322 QmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~~~lPvaa 371 (428)
=+|..+.+||++-+. .+ |-.+.++|+++.+ .++|+.+|+. +.+|+.
T Consensus 14 ALD~~~~~~al~l~~-~~--~~~v~~~Kvg~~lf~~~G~~~v~~L~~~-g~~ifl 64 (239)
T 3tr2_A 14 AIDAGTVEQARAQIN-PL--TPELCHLKIGSILFTRYGPAFVEELMQK-GYRIFL 64 (239)
T ss_dssp ECCCSSHHHHHHHHT-TC--CTTTCEEEEEHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred EeCCCCHHHHHHHHH-Hh--CCcccEEEeCHHHHHhhCHHHHHHHHhc-CCCEEE
Confidence 468889899876654 23 3345688999876 6788898874 666664
No 394
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=35.82 E-value=50 Score=32.58 Aligned_cols=60 Identities=18% Similarity=0.376 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCC------------HHHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~------------v~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
++.+.+.-+.++||++|-|-|+.+. +.....|+.-+. +.+-|++++++ .|-||-|+-+-.
T Consensus 33 Gi~~kLdYLk~LGvt~I~L~Pi~~~----~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~--Gi~VilD~V~NH 104 (549)
T 4aie_A 33 GIISRLDYLEKLGIDAIWLSPVYQS----PGVDNGYDISDYEAIDPQYGTMADMDELISKAKEH--HIKIVMDLVVNH 104 (549)
T ss_dssp HHHTTHHHHHHHTCSEEEECCCEEC----CCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHhhHHHHHCCCCEEEeCCCcCC----CCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHC--CCEEEEEECccC
Confidence 5788888999999999999886442 122233443322 34555555554 799999998754
No 395
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=35.46 E-value=22 Score=34.49 Aligned_cols=57 Identities=12% Similarity=0.205 Sum_probs=44.7
Q ss_pred echhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEe
Q 014237 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (428)
Q Consensus 153 ~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vit 217 (428)
++.+ ++.++..++.+.|-.-|=|.. +|++|...+|++ ...+++..||++.||++|-.
T Consensus 31 vTpe-Eia~~A~~a~~AGAaivHlHv------Rd~~G~ps~d~~-~~~e~~~~IR~~~pd~ii~~ 87 (282)
T 2y7e_A 31 ITPE-EQAKEAKACFEAGARVIHLHI------REDDGRPSQRLD-RFQEAISAIREVVPEIIIQI 87 (282)
T ss_dssp CSHH-HHHHHHHHHHHHTEEEEEECE------ECTTSCEECCHH-HHHHHHHHHHHHCTTSEEEE
T ss_pred CCHH-HHHHHHHHHHHcCCcEEEEee------cCCCCCcCCCHH-HHHHHHHHHHHHCCCeEEEe
Confidence 4565 699999999999987766644 456788777664 67889999999999988743
No 396
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=35.41 E-value=2e+02 Score=26.55 Aligned_cols=125 Identities=17% Similarity=0.148 Sum_probs=71.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccC-------------C
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP-------------Y 224 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~-------------Y 224 (428)
++.+.++++.+.|++.|++.|... -.|++- + -+++.+..+++.||++.+..-..-++ +
T Consensus 61 si~~aL~~l~~~G~~~vvV~Pl~l-----~~G~~~---~-di~~~v~~~~~~~~~i~~~~pl~~~~~~~~~l~~~l~~~~ 131 (264)
T 2xwp_A 61 TPLQALQKLAAQGYQDVAIQSLHI-----INGDEY---E-KIVREVQLLRPLFTRLTLGVPLLSSHNDYVQLMQALRQQM 131 (264)
T ss_dssp CHHHHHHHHHHHTCCEEEEEECCS-----SSSHHH---H-HHHHHHHHHGGGCSEEEEECCSSCSHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHhCCCCEEEEEeCcc-----cCcHHH---H-HHHHHHHHHHhhCCceEEecCCCCCHHHHHHHHHHHHHhc
Confidence 466778999999999999998643 135432 2 56778888888899876543322221 1
Q ss_pred CCC-Ccceeec-CCCccccHHHHHHHHHHHHHHHHcCCCe-ecCCCCCCchHHHHHHHHHHCCCCCceeechh
Q 014237 225 SSD-GHDGIVR-EDGVIMNDETVHQLCKQAVSQARAGADV-VSPSDMMDGRVGAIRAALDAEGFQHVSIMSYT 294 (428)
Q Consensus 225 Tsh-GHcGil~-~~g~IdND~Tl~~Lak~Als~A~AGADi-VAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYs 294 (428)
... ...+++- -.|.=+. .-....+.+....+.|-.+ ++.-.. .=.+...=+.|.+.|.++|.|+.|.
T Consensus 132 ~~~~~~~~lvl~gHGs~~~--~~~~~~~~a~~l~~~~~~v~~g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~ 201 (264)
T 2xwp_A 132 PSLRQTEKVVFMGHGASHH--AFAAYACLDHMMTAQRFPARVGAVES-YPEVDILIDSLRDEGVTGVHLMPLM 201 (264)
T ss_dssp CCCCTTEEEEEEECCCSSG--GGHHHHHHHHHHHHTTCSEEEEESSS-SSCHHHHHHHHHHHTCCEEEEEECS
T ss_pred cccCCCCeEEEEECCCCch--hhHHHHHHHHHHHhhCCCEEEEEeCC-CCCHHHHHHHHHHCCCCEEEEEeee
Confidence 111 1234442 2343332 2233444444444445322 232221 3345555556777899999998884
No 397
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=35.35 E-value=63 Score=28.71 Aligned_cols=76 Identities=22% Similarity=0.262 Sum_probs=54.1
Q ss_pred ChHHHHHHHHhchhcCCceEEecCCCc---hHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCch------hhHHH
Q 014237 327 NYREALVEAQADESEGADILLVKPGLP---YLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDE------QRVMM 397 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVKPal~---YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~------~~~vl 397 (428)
|..||+..+. +...|+|++=-.|+ =+++++.+++...+|+..+.-..+-..+..|.+.|..|. .+.++
T Consensus 69 ~~~~al~~~~---~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~~L~ 145 (249)
T 3q9s_A 69 SAMNGLIKAR---EDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARDTVEEKVRLLGLGADDYLIKPFHPDELL 145 (249)
T ss_dssp SHHHHHHHHH---HSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHh---cCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHCCCcEEEECCCCHHHHH
Confidence 6677776654 24589999875554 478899999876899999988887777888888876542 24455
Q ss_pred HHHHHHHH
Q 014237 398 ESLMCLRR 405 (428)
Q Consensus 398 EsL~~~kR 405 (428)
+.+..+.+
T Consensus 146 ~~i~~~l~ 153 (249)
T 3q9s_A 146 ARVKVQLR 153 (249)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 55555544
No 398
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=35.21 E-value=23 Score=32.66 Aligned_cols=45 Identities=29% Similarity=0.335 Sum_probs=30.8
Q ss_pred CCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhhCCCCeE
Q 014237 323 MNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDKYPLPIA 370 (428)
Q Consensus 323 mdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~~~lPva 370 (428)
+|..|.+|+++-++. +...+ -++|+++.. .++|+.+|+..+.+++
T Consensus 19 lD~~~~~~a~~~v~~-~~~~v--~~~Kvg~~lf~~~G~~~v~~l~~~~g~~v~ 68 (228)
T 3m47_A 19 MDLMNRDDALRVTGE-VREYI--DTVKIGYPLVLSEGMDIIAEFRKRFGCRII 68 (228)
T ss_dssp CCCCSHHHHHHHHHT-TTTTC--SEEEEEHHHHHHHCTHHHHHHHHHHCCEEE
T ss_pred eCCCCHHHHHHHHHH-cCCcc--cEEEEcHHHHHhcCHHHHHHHHhcCCCeEE
Confidence 688999999888763 33334 467888755 6888898885344444
No 399
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=35.16 E-value=89 Score=27.32 Aligned_cols=86 Identities=16% Similarity=0.047 Sum_probs=46.7
Q ss_pred ChHHHHHHHHhchhcCCceEEe-cCCCchHHHHHHHHhhCCCCeEE--EEechHHHHHHHHHHCCC--CchhhHHHHHHH
Q 014237 327 NYREALVEAQADESEGADILLV-KPGLPYLDVIRLLRDKYPLPIAA--YQVSGEYSMIKAGGALKM--IDEQRVMMESLM 401 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMV-KPal~YLDII~~vk~~~~lPvaa--YqVSGEYaMIkaAa~~G~--iD~~~~vlEsL~ 401 (428)
+.++.+..+..=++.|+|+|-+ -+....+..|+++++.+++|+.. -.+.-.+ -++.|.+.|. +=....-.+.+.
T Consensus 17 d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~-~i~~a~~~Gad~V~~~~~~~~~~~ 95 (212)
T 2v82_A 17 TPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPE-QVDALARMGCQLIVTPNIHSEVIR 95 (212)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHH-HHHHHHHTTCCEEECSSCCHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHH-HHHHHHHcCCCEEEeCCCCHHHHH
Confidence 3444444444335679999865 34445678889998888877654 1111122 3555666552 000111134445
Q ss_pred HHHHhcccEeeh
Q 014237 402 CLRRAGADIILT 413 (428)
Q Consensus 402 ~~kRAGAd~IiT 413 (428)
..++.|.++++.
T Consensus 96 ~~~~~g~~~~~g 107 (212)
T 2v82_A 96 RAVGYGMTVCPG 107 (212)
T ss_dssp HHHHTTCEEECE
T ss_pred HHHHcCCCEEee
Confidence 566777776655
No 400
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=35.12 E-value=36 Score=34.52 Aligned_cols=139 Identities=18% Similarity=0.204 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCC-CCCccc
Q 014237 242 DETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPR-FGDKKT 320 (428)
Q Consensus 242 D~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~-fgDRkt 320 (428)
=-|-+.+++++-.++..|.|+|= |.++..+-+-|-+--.+.-+. +|+..+-+ -|.+|-
T Consensus 142 GLs~~~~a~~~ye~~~GGlDfiK----------------DDE~l~~qpf~p~~eR~~~~~-----eai~ra~~eTGe~k~ 200 (378)
T 3qfw_A 142 GLSPAALASIAHQLALGGVDLIK----------------DDHGLADQAFSPFAERAAAVG-----KAVREANAARGGRTL 200 (378)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEE----------------ECTTCSSCTTSCHHHHHHHHH-----HHHHHHHHHHTCCCE
T ss_pred cCCHHHHHHHHHHHHhcCCCccc----------------CCcCcCCCCcccHHHHHHHHH-----HHHHHHHHhhCCccE
Confidence 34667899999999999999973 233333333222222111100 11111111 166777
Q ss_pred cCCCCC-ChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCchhhHHHH
Q 014237 321 YQMNPA-NYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMME 398 (428)
Q Consensus 321 YQmdpa-N~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlE 398 (428)
|-.+-. ..+|.++.++.=.+.|+.++||=+-..=++.++.+++.+ ++|+-+- =- |.= + .|+-. ..++
T Consensus 201 y~~NiTa~~~em~~ra~~a~e~G~~~~mvd~~~~G~~a~~~l~r~~p~~~lh~H-rA----~~g--a-hGi~~--~~vl- 269 (378)
T 3qfw_A 201 YAPNISGTLDDMRRQLGVIRDEGIGAVLVAPMIVGVSNFHAIVKEAAGLVVVAH-PA----MAG--A-AKIAA--PLLL- 269 (378)
T ss_dssp EECBCCSSHHHHHHHHHHHHHHTCCEEEECHHHHCHHHHHHHHTTCTTCEEEEC-CT----TC------CBCH--HHHH-
T ss_pred EEeecCCCHHHHHHHHHHHHHcCCCEEEEeccccCHHHHHHHHHhCCCCEEEeC-cC----chh--h-ccCcH--HHHH-
Confidence 777665 456777778888889999999987554578999999888 8887643 21 111 1 45421 1122
Q ss_pred HHHHHHHhcccEeeh
Q 014237 399 SLMCLRRAGADIILT 413 (428)
Q Consensus 399 sL~~~kRAGAd~IiT 413 (428)
-+.+|=+|+|.|++
T Consensus 270 -~Kl~RLaG~D~ih~ 283 (378)
T 3qfw_A 270 -GRLFRLFGADATVF 283 (378)
T ss_dssp -THHHHHHTCSEEEE
T ss_pred -HHHHHHhCCCccee
Confidence 23567789999975
No 401
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=34.83 E-value=1.2e+02 Score=30.76 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCC-eEEE
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPD-LVIY 216 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pd-l~Vi 216 (428)
...+.++.+++.|++.+.+.. . .| +..+ +...|+.||+.+|+ +.||
T Consensus 242 ~~~e~~~~l~e~gv~~l~Vd~--~------~g----~~~~-~~~~i~~lk~~~~~~~~Vi 288 (503)
T 1me8_A 242 DFRERVPALVEAGADVLCIDS--S------DG----FSEW-QKITIGWIREKYGDKVKVG 288 (503)
T ss_dssp SHHHHHHHHHHHTCSEEEECC--S------CC----CSHH-HHHHHHHHHHHHGGGSCEE
T ss_pred hHHHHHHHHHhhhccceEEec--c------cC----cccc-hhhHHHHHHHhCCCCceEe
Confidence 467778888888988655532 1 11 1122 56678999998887 6555
No 402
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=34.72 E-value=1.1e+02 Score=29.64 Aligned_cols=56 Identities=20% Similarity=0.269 Sum_probs=39.5
Q ss_pred chhcCCceEEecCCCch----HHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEee
Q 014237 338 DESEGADILLVKPGLPY----LDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 338 Di~EGADilMVKPal~Y----LDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
..+-||+.|=|=-.-.| +|-++.+|+.+++||-.=-. .+|+- -+.|+ |.+|||+|+
T Consensus 72 ~~~~GA~aiSVLTd~~~F~Gs~~~L~~vr~~v~lPvLrKDF--------------iid~y-QI~eA----r~~GADaIL 131 (258)
T 4a29_A 72 FMERYAVGLSITTEEKYFNGSYETLRKIASSVSIPILMSDF--------------IVKES-QIDDA----YNLGADTVL 131 (258)
T ss_dssp HHTTTCSEEEEECCSTTTCCCHHHHHHHHTTCSSCEEEESC--------------CCSHH-HHHHH----HHHTCSEEE
T ss_pred HHhCCCeEEEEeCCCCCCCCCHHHHHHHHHhcCCCEeeccc--------------cccHH-HHHHH----HHcCCCeee
Confidence 45679999988665555 78899999999999875321 34543 34554 556888775
No 403
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=34.66 E-value=81 Score=30.56 Aligned_cols=62 Identities=18% Similarity=0.130 Sum_probs=43.0
Q ss_pred HHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCC-chhhHHHHHHHHHHHhcccEee
Q 014237 334 EAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMI-DEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 334 E~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~i-D~~~~vlEsL~~~kRAGAd~Ii 412 (428)
.+..=.+-|||+|=+++- -|-++++.+..++||.+ || |-- + ++-++|.+....++||+.++
T Consensus 194 aariA~elGAD~VKt~~t---~e~~~~vv~~~~vPVv~---~G-----------G~~~~-~~~~l~~v~~ai~aGA~Gv~ 255 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTYYV---EKGFERIVAGCPVPIVI---AG-----------GKKLP-EREALEMCWQAIDQGASGVD 255 (295)
T ss_dssp HHHHHHHTTCSEEEEECC---TTTHHHHHHTCSSCEEE---EC-----------CSCCC-HHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhCCCEEEeCCC---HHHHHHHHHhCCCcEEE---EE-----------CCCCC-HHHHHHHHHHHHHhCCeEEE
Confidence 445556789999888853 26678999888999873 33 211 3 34667777777788888776
Q ss_pred h
Q 014237 413 T 413 (428)
Q Consensus 413 T 413 (428)
.
T Consensus 256 v 256 (295)
T 3glc_A 256 M 256 (295)
T ss_dssp E
T ss_pred e
Confidence 4
No 404
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=34.66 E-value=3.2e+02 Score=26.27 Aligned_cols=184 Identities=19% Similarity=0.233 Sum_probs=102.7
Q ss_pred HHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCCccccHHHH
Q 014237 166 ARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETV 245 (428)
Q Consensus 166 ~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl 245 (428)
..+.|=+-++.|-+.|+ |+..|.+. +.+.++.|+..-||.+-|||-. .|. ..+.|+
T Consensus 6 ~l~~~~~~~~S~E~~PP--k~~~~~~~------l~~~~~~L~~~~pd~vsVT~~~---------~g~-------~r~~t~ 61 (310)
T 3apt_A 6 LLKARRGPLFSFEFFPP--KDPEGEEA------LFRTLEELKAFRPAFVSITYGA---------MGS-------TRERSV 61 (310)
T ss_dssp HHHTTCSCEEEEEECCC--SSHHHHHH------HHHHHHHHGGGCCSEEEECCCS---------TTC-------SHHHHH
T ss_pred HHhCCCCcEEEEEEeCC--CCcchHHH------HHHHHHHHhcCCCCEEEEecCC---------CCC-------cchhHH
Confidence 34445324677776664 55544332 3457788888779998887743 111 234466
Q ss_pred HHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHH---HCCCCCceeech------------------hhh---hcccc
Q 014237 246 HQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALD---AEGFQHVSIMSY------------------TAK---YASSF 301 (428)
Q Consensus 246 ~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD---~~Gf~~v~IMSY------------------saK---yASaf 301 (428)
+.-.. .+ +.|-+.|+==-..|--..+|++.|+ +.|..|+..+.= |.. |.-.+
T Consensus 62 ~~a~~---i~-~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~ 137 (310)
T 3apt_A 62 AWAQR---IQ-SLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRER 137 (310)
T ss_dssp HHHHH---HH-HTTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHH
T ss_pred HHHHH---HH-HhCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 53222 22 5687777665566666666766665 567777655431 110 11122
Q ss_pred ccc-hhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCC---chHHHHHHHHhh-CCCCeEEEEe-c
Q 014237 302 YGP-FREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGL---PYLDVIRLLRDK-YPLPIAAYQV-S 375 (428)
Q Consensus 302 YGP-FRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal---~YLDII~~vk~~-~~lPvaaYqV-S 375 (428)
||. |.=.+..-|. |. .+-.|.+.-+.....=++-|||+++.-+-. .|++.+.++++. .++||.+.=- =
T Consensus 138 ~g~~f~igvA~yPE-~H-----p~~~~~~~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi 211 (310)
T 3apt_A 138 YGDRVSVGGAAYPE-GH-----PESESLEADLRHFKAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPV 211 (310)
T ss_dssp HGGGSEEEEEECTT-CC-----TTSSCHHHHHHHHHHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCC
T ss_pred CCCCeEEEEEeCCC-cC-----CCCCCHHHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEeccc
Confidence 232 3322222221 10 122355556777777789999999998864 467777777764 3688877644 2
Q ss_pred hHHHHHHH
Q 014237 376 GEYSMIKA 383 (428)
Q Consensus 376 GEYaMIka 383 (428)
.-|.+++.
T Consensus 212 ~s~~~~~~ 219 (310)
T 3apt_A 212 TSYRQLRR 219 (310)
T ss_dssp CCTTHHHH
T ss_pred CCHHHHHH
Confidence 34444443
No 405
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=34.64 E-value=24 Score=32.25 Aligned_cols=81 Identities=15% Similarity=0.191 Sum_probs=50.3
Q ss_pred CCCCCChHHHHHHHHhchhcCCceEEecCCCch-----HHHHHHHHhhC-CCCeEE---EEechHHHHHHHHHHCCCCch
Q 014237 322 QMNPANYREALVEAQADESEGADILLVKPGLPY-----LDVIRLLRDKY-PLPIAA---YQVSGEYSMIKAGGALKMIDE 392 (428)
Q Consensus 322 QmdpaN~~EAlrE~~lDi~EGADilMVKPal~Y-----LDII~~vk~~~-~lPvaa---YqVSGEYaMIkaAa~~G~iD~ 392 (428)
=+|..|.+||++-+.. +...+ .++|.++.. +++|+++|+++ +.+++. .+--|+. +.+++++.|. |-
T Consensus 11 AlD~~~~~~a~~~~~~-~~~~~--~~ikvg~~lf~~~G~~~v~~l~~~~p~~~iflDlKl~Dip~t-~~~~~~~~Ga-d~ 85 (221)
T 3exr_A 11 ALDHSNLKGAITAAVS-VGNEV--DVIEAGTVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGT-VAKNNAVRGA-DW 85 (221)
T ss_dssp EECCSSHHHHHHHHHH-HGGGC--SEEEECHHHHHHHCTHHHHHHHHHCTTSEEEEEEEECSCHHH-HHHHHHTTTC-SE
T ss_pred EeCCCCHHHHHHHHHh-hCCCc--eEEEECHHHHHhcCHHHHHHHHHhCCCCcEEEEEEeeccHHH-HHHHHHHcCC-CE
Confidence 3688899999988764 44444 466777643 78999999987 677776 3344544 2344555552 21
Q ss_pred --------hhHHHHHHHHHHHhc
Q 014237 393 --------QRVMMESLMCLRRAG 407 (428)
Q Consensus 393 --------~~~vlEsL~~~kRAG 407 (428)
...+-+.+..++..|
T Consensus 86 vtVH~~~g~~~l~~a~~~~~~~g 108 (221)
T 3exr_A 86 MTCICSATIPTMKAARKAIEDIN 108 (221)
T ss_dssp EEEETTSCHHHHHHHHHHHHHHC
T ss_pred EEEeccCCHHHHHHHHHHHHhcC
Confidence 334445555555555
No 406
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=34.56 E-value=39 Score=30.26 Aligned_cols=189 Identities=15% Similarity=0.099 Sum_probs=95.7
Q ss_pred cCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecC----CCccccHHHHHHHH---------HHHHHH
Q 014237 189 GDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE----DGVIMNDETVHQLC---------KQAVSQ 255 (428)
Q Consensus 189 Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~----~g~IdND~Tl~~La---------k~Als~ 255 (428)
|..+.-|+|-+. |++.-.+.--| .|=+||.| |.+|+-=++++ +|. ..|-|++.|. ++.+..
T Consensus 15 G~~~~~PENTl~-Af~~A~~~G~d-~iE~DV~l---T~Dg~lVv~HD~~l~~g~-v~~~t~~eL~~l~~~iptL~evl~~ 88 (224)
T 1vd6_A 15 GAPLKAKENTLE-SFRLALEAGLD-GVELDVWP---TRDGVFAVRHDPDTPLGP-VFQVDYADLKAQEPDLPRLEEVLAL 88 (224)
T ss_dssp SCTTTSCTTSHH-HHHHHHHTTCS-EEEEEEEE---CTTSCEEECSCSEETTEE-GGGSCHHHHHHHSTTCCBHHHHHGG
T ss_pred CCCCCCCcchHH-HHHHHHHcCCC-EEEEEeeE---ecCCcEEEECCCccCCCC-hhhCCHHHHHhcCCCCCCHHHHHHh
Confidence 444455666544 33332222223 46678776 56665444431 233 3466666653 345555
Q ss_pred HH--cCCC----eecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChH
Q 014237 256 AR--AGAD----VVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYR 329 (428)
Q Consensus 256 A~--AGAD----iVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~ 329 (428)
+. .+.- +=.+...-.|-+..+-+.|.+ ..+|.|.||...... -+|.. .|.+ +..|-..... .
T Consensus 89 ~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~--~~~v~i~Sf~~~~l~----~~~~~---~p~~--~~~~l~~~~~-~ 156 (224)
T 1vd6_A 89 KEAFPQAVFNVELKSFPGLGEEAARRLAALLRG--REGVWVSSFDPLALL----ALRKA---APGL--PLGFLMAEDH-S 156 (224)
T ss_dssp GGTCTTCEEEEEECCCTTSHHHHHHHHHHHTTT--CSSEEEEESCHHHHH----HHHHH---CTTS--CEEEEESSCC-G
T ss_pred hhccCCceEEEEECCCCCccHHHHHHHHHHHhc--CCcEEEEeCCHHHHH----HHHHH---CCCC--CEEEEecccc-H
Confidence 54 1221 112222222345566666655 456777776543211 12222 2322 1112211111 1
Q ss_pred HHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhccc
Q 014237 330 EALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGAD 409 (428)
Q Consensus 330 EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd 409 (428)
+.. -+-|+|.+-+.-.+.--+.|+.+++ .+++|.+|-| |.+ |.+..+.+.|+|
T Consensus 157 ----~~~--~~~~~~~i~~~~~~~~~~~v~~~~~-~G~~v~~wtv----------------n~~----~~~~~l~~~Gvd 209 (224)
T 1vd6_A 157 ----ALL--PCLGVEAVHPHHALVTEEAVAGWRK-RGLFVVAWTV----------------NEE----GEARRLLALGLD 209 (224)
T ss_dssp ----GGG--GGSCCSEEEEBGGGCCHHHHHHHHH-TTCEEEEECC----------------CCH----HHHHHHHHTTCS
T ss_pred ----HHH--HHcCCcEEecCcccCCHHHHHHHHH-CCCEEEEEeC----------------CCH----HHHHHHHhcCCC
Confidence 111 1247888765433333567888775 6899999988 322 345566788999
Q ss_pred EeehhcHHHHHHH
Q 014237 410 IILTYFALQAARC 422 (428)
Q Consensus 410 ~IiTYfA~e~a~w 422 (428)
.|+|-+-..+.++
T Consensus 210 gI~TD~p~~~~~~ 222 (224)
T 1vd6_A 210 GLIGDRPEVLLPL 222 (224)
T ss_dssp EEEESCHHHHTTS
T ss_pred EEEcCCHHHHHHh
Confidence 9999987665443
No 407
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=34.33 E-value=44 Score=25.40 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=34.4
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh--C-CCCeEEEEech
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK--Y-PLPIAAYQVSG 376 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~--~-~lPvaaYqVSG 376 (428)
|..||+.... ++..|+|++= |++.-+++++.+|+. . .+|+....-+.
T Consensus 35 ~~~~a~~~l~---~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 87 (127)
T 3i42_A 35 SGTDALHAMS---TRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFA 87 (127)
T ss_dssp SHHHHHHHHH---HSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-
T ss_pred CHHHHHHHHH---hcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCc
Confidence 5667776654 3558999986 667779999999986 3 68988876543
No 408
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=34.22 E-value=80 Score=29.94 Aligned_cols=42 Identities=31% Similarity=0.427 Sum_probs=29.1
Q ss_pred hHHHHHHHHhhC--CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehh
Q 014237 354 YLDVIRLLRDKY--PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 354 YLDII~~vk~~~--~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTY 414 (428)
.++.++++++.. ++||.+ .|-|..-+-+.|.| ++|||+|-.+
T Consensus 275 ~~~~i~~i~~~~~~~ipVi~---------------~GGI~~~~da~~~l----~~GAd~V~ig 318 (336)
T 1f76_A 275 STEIIRRLSLELNGRLPIIG---------------VGGIDSVIAAREKI----AAGASLVQIY 318 (336)
T ss_dssp HHHHHHHHHHHHTTSSCEEE---------------ESSCCSHHHHHHHH----HHTCSEEEES
T ss_pred HHHHHHHHHHHhCCCCCEEE---------------ECCCCCHHHHHHHH----HCCCCEEEee
Confidence 368999999988 799875 34454444445544 4799999654
No 409
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=34.12 E-value=69 Score=34.69 Aligned_cols=104 Identities=19% Similarity=0.230 Sum_probs=68.2
Q ss_pred chhhhHHHHH-HHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCC------------HHHHHHHHHHHCCCeEEEeeec
Q 014237 154 GWRHGLVQEV-AKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVA 220 (428)
Q Consensus 154 s~~~~l~~~v-~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~------------v~rAIr~iK~~~Pdl~VitDVc 220 (428)
++. ++.+++ ..+.++|+++|-|-|+-+. ...++..|++-+. ..+.|+.++++ .|-||.|+.
T Consensus 261 ~~~-~l~~~l~~yLk~lG~t~I~L~Pi~e~---~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~--GI~VilD~V 334 (722)
T 3k1d_A 261 SYR-QLARELTDYIVDQGFTHVELLPVAEH---PFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQA--GIGVIVDWV 334 (722)
T ss_dssp CHH-HHHHHHHHHHHHHTCSEEEESCCEEC---SCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred CHH-HHHHHHHHHHHHcCCCeEEECCcccC---CCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHc--CCEEEEEEE
Confidence 454 578887 8899999999999885321 1223445655444 24566666665 699999999
Q ss_pred ccCCCCCCcc-----e--eec-CC---------C----ccccHHHHHHHHHHHHHHHH-cCCCee
Q 014237 221 LDPYSSDGHD-----G--IVR-ED---------G----VIMNDETVHQLCKQAVSQAR-AGADVV 263 (428)
Q Consensus 221 Lc~YTshGHc-----G--il~-~~---------g----~IdND~Tl~~Lak~Als~A~-AGADiV 263 (428)
+-....++|. | ... .+ | ...|.+..+.|...++-..+ -|+|-+
T Consensus 335 ~NH~~~~~~~~~~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~gvDGf 399 (722)
T 3k1d_A 335 PAHFPKDAWALGRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHIDGL 399 (722)
T ss_dssp TTCCCCCTTTTTTTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHSCCCEE
T ss_pred eeccCCccchhhcCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 8776555431 1 000 00 0 23577888889999988888 598765
No 410
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=33.92 E-value=79 Score=32.88 Aligned_cols=126 Identities=18% Similarity=0.248 Sum_probs=74.6
Q ss_pred CCceeeEEEeeCCCCcccCCCCCceeechhhhHHHHH-HHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCC-------
Q 014237 127 ANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEV-AKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------- 198 (428)
Q Consensus 127 ~dLI~PlFV~eg~~~~~I~SMPGv~r~s~~~~l~~~v-~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~------- 198 (428)
.-.||=|+|..=.. .+ . .| .+-++. ++.+.+ ..+.++||++|-|-|+-+. . ..++..|++-+.
T Consensus 131 ~~~iYei~~~~f~~-~~-~--~g-~~g~~~-~i~~~ll~yl~~lGv~~i~l~Pi~~~-~--~~~~~GY~~~~y~~~~~~~ 201 (617)
T 1m7x_A 131 PISIYEVHLGSWRR-HT-D--NN-FWLSYR-ELADQLVPYAKWMGFTHLELLPINEH-P--FDGSWGYQPTGLYAPTRRF 201 (617)
T ss_dssp CCEEEEECTTSSCB-CT-T--TC-CBCCHH-HHHHHHHHHHHHTTCSEEEESCCEEC-S--CGGGTTSSCSEEEEECGGG
T ss_pred CcEEEEEEHHHhcC-CC-C--CC-CccCHH-HHHHHHHHHHHHcCCCEEEecccccC-C--CCCCCCcccccCCccCccC
Confidence 34577777653221 10 0 12 133564 578886 8999999999999886322 1 123445655443
Q ss_pred -----HHHHHHHHHHHCCCeEEEeeecccCCCCCCcc-----e--eec-C---CC----------ccccHHHHHHHHHHH
Q 014237 199 -----VPRTIWLLKDRYPDLVIYTDVALDPYSSDGHD-----G--IVR-E---DG----------VIMNDETVHQLCKQA 252 (428)
Q Consensus 199 -----v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHc-----G--il~-~---~g----------~IdND~Tl~~Lak~A 252 (428)
+.+.|+.+.++ .|-||-|+-+-...+.+|. | ... . +| .-.|.+..+.|...+
T Consensus 202 Gt~~~~~~lv~~~H~~--Gi~VilD~V~NH~~~~~~~~~~~d~~~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~ 279 (617)
T 1m7x_A 202 GTRDDFRYFIDAAHAA--GLNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNA 279 (617)
T ss_dssp SCHHHHHHHHHHHHHT--TCEEEEEECTTSCCCSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHC--CCEEEEEEecCcccCccchhhhcCCCccccccCcccCCcCCCCCceecCCCHHHHHHHHHHH
Confidence 23445555554 7999999998776544441 1 000 0 01 124667788888888
Q ss_pred HHHHHc-CCCee
Q 014237 253 VSQARA-GADVV 263 (428)
Q Consensus 253 ls~A~A-GADiV 263 (428)
.-..+. |+|-+
T Consensus 280 ~~W~~~~gvDGf 291 (617)
T 1m7x_A 280 LYWIERFGIDAL 291 (617)
T ss_dssp HHHHHHSCCCEE
T ss_pred HHHHHHhCcCEE
Confidence 888886 88744
No 411
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=33.79 E-value=62 Score=33.47 Aligned_cols=60 Identities=15% Similarity=0.289 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCC------------HHHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~------------v~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
++.+.+..+.++||.+|-|-|+.+. +..+..|+.-+. +.+.|+.++++ .|-||.|+-+-.
T Consensus 41 gi~~~Ldyl~~LGv~~i~l~Pi~~~----~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~--Gi~VilD~V~NH 112 (589)
T 3aj7_A 41 GIASKLEYIKELGADAIWISPFYDS----PQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKL--GMKFITDLVINH 112 (589)
T ss_dssp HHHHTHHHHHHHTCSEEEECCCEEC----CCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHHHHHHHHcCCCEEEECCcccC----CCCCCCcCcccccccccccCCHHHHHHHHHHHHHC--CCEEEEEecccc
Confidence 6888899999999999999886332 222344554433 34555555554 799999998754
No 412
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=33.78 E-value=70 Score=29.86 Aligned_cols=33 Identities=12% Similarity=0.269 Sum_probs=23.7
Q ss_pred hhcCCceEEe-cC------CCchHHHHHHHHhhCCCCeEE
Q 014237 339 ESEGADILLV-KP------GLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 339 i~EGADilMV-KP------al~YLDII~~vk~~~~lPvaa 371 (428)
.+.|+|+|+. .+ ++.-.+.|+++++..++||++
T Consensus 144 ~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv 183 (264)
T 1xm3_A 144 EELGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVPVIV 183 (264)
T ss_dssp HHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE
T ss_pred HHhCCCEEEECCcccCCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 3468998876 11 122378899999988999976
No 413
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=33.55 E-value=60 Score=32.39 Aligned_cols=25 Identities=32% Similarity=0.530 Sum_probs=16.5
Q ss_pred cCCCchHHHHHHHHhhCCCCeEEEEe
Q 014237 349 KPGLPYLDVIRLLRDKYPLPIAAYQV 374 (428)
Q Consensus 349 KPal~YLDII~~vk~~~~lPvaaYqV 374 (428)
.|.+. +++|+.+|+.+++||..=-|
T Consensus 236 d~~~~-~~~i~~lr~~~~~PvivKgv 260 (392)
T 2nzl_A 236 DPSIS-WEDIKWLRRLTSLPIVAKGI 260 (392)
T ss_dssp CTTCC-HHHHHHHC--CCSCEEEEEE
T ss_pred ChHHH-HHHHHHHHHhhCCCEEEEec
Confidence 35444 56799999999999887543
No 414
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=33.26 E-value=1.9e+02 Score=27.38 Aligned_cols=154 Identities=16% Similarity=0.194 Sum_probs=87.0
Q ss_pred eechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCC--CeEEEeeecccCCCCCCc
Q 014237 152 RLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP--DLVIYTDVALDPYSSDGH 229 (428)
Q Consensus 152 r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P--dl~VitDVcLc~YTshGH 229 (428)
++-.+ .+.+.++.+++.|+..+.+.|. +|+...=..-=-.+.++...+... .+-||+=+
T Consensus 24 ~iD~~-~l~~lv~~li~~Gv~gl~v~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------- 84 (301)
T 3m5v_A 24 KVDEQ-SYARLIKRQIENGIDAVVPVGT--------TGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------- 84 (301)
T ss_dssp EECHH-HHHHHHHHHHHTTCCEEECSST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC----------
T ss_pred CCCHH-HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC----------
Confidence 34454 5888999999999999999985 233222111122345555555443 35555422
Q ss_pred ceeecCCCccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeechhhhhcccccc
Q 014237 230 DGIVREDGVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYG 303 (428)
Q Consensus 230 cGil~~~g~IdND~Tl~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYG 303 (428)
|.-.-++|+ +.+-..+++|||-| .|.= --+|-+...|+..+.. +++||=|-.
T Consensus 85 -------g~~~t~~ai----~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn~-------- 142 (301)
T 3m5v_A 85 -------GSNATHEAV----GLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSV---DIPVLLYNV-------- 142 (301)
T ss_dssp -------CCSSHHHHH----HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEEC--------
T ss_pred -------CCCCHHHHH----HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEeC--------
Confidence 111233444 33344467899964 3321 1268888888887775 689988732
Q ss_pred chhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhC
Q 014237 304 PFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKY 365 (428)
Q Consensus 304 PFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~ 365 (428)
|- |..+.|+| |-+.+.. + .--.++-+|=+..=++-+.++.+.+
T Consensus 143 P~------------~tg~~l~~----~~~~~La-~--~~pnivgiKdssgd~~~~~~~~~~~ 185 (301)
T 3m5v_A 143 PG------------RTGCEIST----DTIIKLF-R--DCENIYGVKEASGNIDKCVDLLAHE 185 (301)
T ss_dssp HH------------HHSCCCCH----HHHHHHH-H--HCTTEEEEEECSSCHHHHHHHHHHC
T ss_pred ch------------hhCcCCCH----HHHHHHH-h--cCCCEEEEEeCCCCHHHHHHHHHhC
Confidence 22 23344444 3344443 1 2135889997766566666666655
No 415
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=32.91 E-value=1.5e+02 Score=22.46 Aligned_cols=36 Identities=33% Similarity=0.353 Sum_probs=26.7
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY 365 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~ 365 (428)
|..||+..+. +...|+|++- |++.-+++++.+|+..
T Consensus 38 ~~~~a~~~l~---~~~~dlii~d~~l~~~~g~~~~~~l~~~~ 76 (132)
T 3lte_A 38 NGFDAGIKLS---TFEPAIMTLDLSMPKLDGLDVIRSLRQNK 76 (132)
T ss_dssp SHHHHHHHHH---HTCCSEEEEESCBTTBCHHHHHHHHHTTT
T ss_pred CHHHHHHHHH---hcCCCEEEEecCCCCCCHHHHHHHHHhcC
Confidence 5667766654 3457999887 5556789999999876
No 416
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=32.86 E-value=1.7e+02 Score=28.11 Aligned_cols=116 Identities=16% Similarity=0.119 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHcCCCeec------------CCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcC
Q 014237 244 TVHQLCKQAVSQARAGADVVS------------PSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDS 311 (428)
Q Consensus 244 Tl~~Lak~Als~A~AGADiVA------------PSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~S 311 (428)
+.+.+++.|....++|.+.|= .-+..--+|.+||+++ | .++.|| .+....|
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~---g-~d~~l~---vDan~~~---------- 211 (382)
T 1rvk_A 149 TPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV---G-PDIRLM---IDAFHWY---------- 211 (382)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH---C-TTSEEE---EECCTTC----------
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh---C-CCCeEE---EECCCCC----------
Q ss_pred CCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechH-HHHHHHHHHCCCC
Q 014237 312 NPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGE-YSMIKAGGALKMI 390 (428)
Q Consensus 312 ap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGE-YaMIkaAa~~G~i 390 (428)
+..||++-+..=.+-|.+++=.-=.-..++-.+++++++++||++=.---. -...+...+.|.+
T Consensus 212 ---------------~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~ 276 (382)
T 1rvk_A 212 ---------------SRTDALALGRGLEKLGFDWIEEPMDEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGAC 276 (382)
T ss_dssp ---------------CHHHHHHHHHHHHTTTCSEEECCSCTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCC
T ss_pred ---------------CHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCC
Q ss_pred c
Q 014237 391 D 391 (428)
Q Consensus 391 D 391 (428)
|
T Consensus 277 d 277 (382)
T 1rvk_A 277 D 277 (382)
T ss_dssp S
T ss_pred C
No 417
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=32.85 E-value=1.3e+02 Score=25.83 Aligned_cols=48 Identities=21% Similarity=0.203 Sum_probs=33.9
Q ss_pred ChHHHHHHHHhchh----------cCCceEEec---CCCchHHHHHHHHhh-----CCCCeEEEEe
Q 014237 327 NYREALVEAQADES----------EGADILLVK---PGLPYLDVIRLLRDK-----YPLPIAAYQV 374 (428)
Q Consensus 327 N~~EAlrE~~lDi~----------EGADilMVK---Pal~YLDII~~vk~~-----~~lPvaaYqV 374 (428)
|..||+..+..... .--|+|++= |++.=+|+++.+|+. ..+|+...--
T Consensus 94 ~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~ 159 (206)
T 3mm4_A 94 SGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSG 159 (206)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEES
T ss_pred CHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEEC
Confidence 66777776654321 257888875 666778999999985 5689887654
No 418
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=32.82 E-value=66 Score=32.93 Aligned_cols=60 Identities=17% Similarity=0.458 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCC------------HHHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~------------v~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
++.+.+..+.++||.+|-|-|+.+. +..+..|+.-+. ..+.|++++++ .|-||-|+-+-+
T Consensus 46 gi~~~LdyL~~LGv~~I~l~Pi~~~----~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~--Gi~VilD~V~NH 117 (570)
T 1m53_A 46 GIIEKLDYLKSLGIDAIWINPHYDS----PNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKR--NMRLMIDVVINH 117 (570)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEEC----CCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHHHHHHHHcCCCEEEECCcccC----CCCCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEeccc
Confidence 5888899999999999999886432 222344554433 33445555554 799999998754
No 419
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=32.82 E-value=1.6e+02 Score=27.46 Aligned_cols=55 Identities=24% Similarity=0.218 Sum_probs=35.2
Q ss_pred hhcCCceEEecCCC----chHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEee
Q 014237 339 ESEGADILLVKPGL----PYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 339 i~EGADilMVKPal----~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
.+-||+.|-|--.- -.++-++.+++.+++||-. - -+.+|+.+ +.| .+.+|||.|+
T Consensus 75 ~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~lPvl~---k-----------dfI~d~~q-i~~----a~~~GAD~Vl 133 (254)
T 1vc4_A 75 ARGGARAVSVLTEPHRFGGSLLDLKRVREAVDLPLLR---K-----------DFVVDPFM-LEE----ARAFGASAAL 133 (254)
T ss_dssp HHTTCSEEEEECCCSSSCCCHHHHHHHHHHCCSCEEE---E-----------SCCCSHHH-HHH----HHHTTCSEEE
T ss_pred HHcCCCEEEEecchhhhccCHHHHHHHHHhcCCCEEE---C-----------CcCCCHHH-HHH----HHHcCCCEEE
Confidence 45789999993211 2567778888899999853 2 24555543 232 4566888775
No 420
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=32.81 E-value=60 Score=29.73 Aligned_cols=92 Identities=13% Similarity=0.173 Sum_probs=50.9
Q ss_pred HHHHCCCCCceeechhhhhccccccchhhhhcCCCC-CCCccccCCCCCChHHHHHHHHhchhcCCceEEec-CCCchHH
Q 014237 279 ALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPR-FGDKKTYQMNPANYREALVEAQADESEGADILLVK-PGLPYLD 356 (428)
Q Consensus 279 aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~-fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-Pal~YLD 356 (428)
.|.+.|++++.|+.-..-|......-|++++...-. .-....|..+..+....+.++. +.++|.|++= ....-.-
T Consensus 135 ~l~~~g~~~iaii~~~~~~g~~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~~~~~~~l~---~~~~d~v~~~~~~~~a~~ 211 (364)
T 3lop_A 135 ALVTIGVTRIGVLYQEDALGKEAITGVERTLKAHALAITAMASYPRNTANVGPAVDKLL---AADVQAIFLGATAEPAAQ 211 (364)
T ss_dssp HHHHTTCCCEEEEEETTHHHHHHHHHHHHHHHTTTCCCSEEEEECTTSCCCHHHHHHHH---HSCCSEEEEESCHHHHHH
T ss_pred HHHHcCCceEEEEEeCchhhHHHHHHHHHHHHHcCCcEEEEEEecCCCccHHHHHHHHH---hCCCCEEEEecCcHHHHH
Confidence 444667777777754444555566667777755321 1123345444445566666554 3689999881 1112244
Q ss_pred HHHHHHhh-CCCCeEEEE
Q 014237 357 VIRLLRDK-YPLPIAAYQ 373 (428)
Q Consensus 357 II~~vk~~-~~lPvaaYq 373 (428)
+++.+++. ..+|+..+.
T Consensus 212 ~~~~~~~~g~~~~~i~~~ 229 (364)
T 3lop_A 212 FVRQYRARGGEAQLLGLS 229 (364)
T ss_dssp HHHHHHHTTCCCEEEECT
T ss_pred HHHHHHHcCCCCeEEEec
Confidence 66666654 367765443
No 421
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=32.66 E-value=30 Score=32.68 Aligned_cols=42 Identities=40% Similarity=0.610 Sum_probs=30.2
Q ss_pred HHHHHHHHcCCCeecCC-----CC-CCch--HHHHHHHHHHCCCCCceeec
Q 014237 250 KQAVSQARAGADVVSPS-----DM-MDGR--VGAIRAALDAEGFQHVSIMS 292 (428)
Q Consensus 250 k~Als~A~AGADiVAPS-----DM-MDGR--V~aIR~aLD~~Gf~~v~IMS 292 (428)
.||+.-|+|||++|+|= |. .||. |..|++.++..|| ++-||.
T Consensus 125 ~QA~laa~AGa~~iSpFVgRidd~g~dG~~~v~~i~~~~~~~~~-~t~iL~ 174 (230)
T 1vpx_A 125 AQAILAAKAGATYVSPFVGRMDDLSNDGMRMLGEIVEIYNNYGF-ETEIIA 174 (230)
T ss_dssp HHHHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTC-SCEEEE
T ss_pred HHHHHHHhCCCeEEEeccchhhhccccHHHHHHHHHHHHHHcCC-CeEEEe
Confidence 36888899999999991 11 1332 6777888888886 666665
No 422
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=32.49 E-value=1e+02 Score=28.69 Aligned_cols=41 Identities=20% Similarity=0.244 Sum_probs=29.0
Q ss_pred HHHHHHHHhhC--CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehh
Q 014237 355 LDVIRLLRDKY--PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 355 LDII~~vk~~~--~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTY 414 (428)
++.|+++++.+ ++||.+ .|-|..-+-+.|.| .+|||.|..+
T Consensus 229 ~~~i~~v~~~~~~~ipvi~---------------~GGI~~~~da~~~l----~~GAd~V~vg 271 (311)
T 1jub_A 229 LANVRAFYTRLKPEIQIIG---------------TGGIETGQDAFEHL----LCGATMLQIG 271 (311)
T ss_dssp HHHHHHHHTTSCTTSEEEE---------------ESSCCSHHHHHHHH----HHTCSEEEEC
T ss_pred HHHHHHHHHhcCCCCCEEE---------------ECCCCCHHHHHHHH----HcCCCEEEEc
Confidence 78999999988 899875 34454444445554 4799998654
No 423
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=32.37 E-value=63 Score=32.89 Aligned_cols=99 Identities=18% Similarity=0.216 Sum_probs=62.4
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCC---------H---HHHHHHHHHHCCCeEEEeeecccCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL---------V---PRTIWLLKDRYPDLVIYTDVALDPYS 225 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~---------v---~rAIr~iK~~~Pdl~VitDVcLc~YT 225 (428)
++.+.+..+.++||.+|-|=|+.+. +..+..|+.-.. . .+.|++++++ .|-||-|+-+-.-
T Consensus 32 gi~~~Ldyl~~LGv~~I~l~Pi~~~----~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~--Gi~VilD~V~NH~- 104 (543)
T 2zic_A 32 GITSKLDYLQKLGVMAIWLSPVYDS----PMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMR--GIKIIMDLVVNHT- 104 (543)
T ss_dssp HHHHTHHHHHHHTCSEEEECCCEEC----CCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTT--TCEEEEEECCSBC-
T ss_pred HHHHHHHHHHHcCCCEEEECCcccC----CCCCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEecCcc-
Confidence 6888899999999999999886432 122234444332 3 3444444443 7999999987543
Q ss_pred CCCcc----------------eeecC--C---------------------------C----ccccHHHHHHHHHHHHHHH
Q 014237 226 SDGHD----------------GIVRE--D---------------------------G----VIMNDETVHQLCKQAVSQA 256 (428)
Q Consensus 226 shGHc----------------Gil~~--~---------------------------g----~IdND~Tl~~Lak~Als~A 256 (428)
+..|- -+..+ + + .-.|.+..+.|.+.+.-..
T Consensus 105 s~~~~~f~~~~~~~~~~y~d~y~~~~~p~~~~~~f~~~~w~~~~~~~~~y~~~f~~~~pdLN~~np~Vr~~i~~~~~~Wl 184 (543)
T 2zic_A 105 SDEHAWFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNFWI 184 (543)
T ss_dssp CTTSHHHHHHHHCTTSGGGGGBCEESSCCSCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHHHHHHHHHH
T ss_pred cccchhhHhhhcCCCCCCcceeecCCCCCcccccCCCCCCcccCCCCcEEECcccCCCCccCcCCHHHHHHHHHHHHHHH
Confidence 22231 00000 0 0 1347788888999888889
Q ss_pred HcCCCee
Q 014237 257 RAGADVV 263 (428)
Q Consensus 257 ~AGADiV 263 (428)
+.|+|-+
T Consensus 185 ~~GvDGf 191 (543)
T 2zic_A 185 DKGIGGF 191 (543)
T ss_dssp TTTCCEE
T ss_pred hcCCCEE
Confidence 9999865
No 424
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=32.24 E-value=85 Score=27.87 Aligned_cols=60 Identities=17% Similarity=0.136 Sum_probs=37.8
Q ss_pred ChHHHHHHHHhchhcCCceEEe--------cCCC---chHHHHHHHHhh--CCCCeEEEEechHHHHHHHHHHCCCCchh
Q 014237 327 NYREALVEAQADESEGADILLV--------KPGL---PYLDVIRLLRDK--YPLPIAAYQVSGEYSMIKAGGALKMIDEQ 393 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMV--------KPal---~YLDII~~vk~~--~~lPvaaYqVSGEYaMIkaAa~~G~iD~~ 393 (428)
|..|+. ++ . .|||+|.+ ||+. .=++.++.+++. .++|+.+ .|-|+.+
T Consensus 97 t~~e~~-~A---~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPvia---------------iGGI~~~ 156 (210)
T 3ceu_A 97 SVEEVK-NR---K-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMA---------------LGGINED 156 (210)
T ss_dssp SHHHHH-TT---G-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEE---------------ESSCCTT
T ss_pred CHHHHH-HH---h-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEE---------------ECCCCHH
Confidence 566643 33 2 69999984 5542 237889999987 5899976 4666754
Q ss_pred hHHHHHHHHHHHhcccEe
Q 014237 394 RVMMESLMCLRRAGADII 411 (428)
Q Consensus 394 ~~vlEsL~~~kRAGAd~I 411 (428)
+ +..+.++||+.|
T Consensus 157 n-----v~~~~~~Ga~gV 169 (210)
T 3ceu_A 157 N-----LLEIKDFGFGGA 169 (210)
T ss_dssp T-----HHHHHHTTCSEE
T ss_pred H-----HHHHHHhCCCEE
Confidence 3 233446888876
No 425
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=32.20 E-value=1.1e+02 Score=31.44 Aligned_cols=98 Identities=9% Similarity=0.132 Sum_probs=61.0
Q ss_pred hcCCCC-CCCccccCCCCCChHHHHHHHHhchhcCCceEEec-----CCCch----------HHHHHHHHh---h--CCC
Q 014237 309 LDSNPR-FGDKKTYQMNPANYREALVEAQADESEGADILLVK-----PGLPY----------LDVIRLLRD---K--YPL 367 (428)
Q Consensus 309 a~Sap~-fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVK-----Pal~Y----------LDII~~vk~---~--~~l 367 (428)
++-+|- |-|-. .+.++|+..+..=++||||||=|= |+... +.+|+.+++ + +++
T Consensus 197 lNvTPDSFsDgg------~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~v 270 (442)
T 3mcm_A 197 VNLSNQSFSDGN------FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKP 270 (442)
T ss_dssp EECSSCC-CCCS------SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCC
T ss_pred EeCCCCCCCCCC------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCC
Confidence 556664 65554 256789999999999999999875 77554 345777877 3 378
Q ss_pred CeEEEEechHHHHHHHHHH--CC--C-C---chhhHHHHHHHHHHHhcccEeehhc
Q 014237 368 PIAAYQVSGEYSMIKAGGA--LK--M-I---DEQRVMMESLMCLRRAGADIILTYF 415 (428)
Q Consensus 368 PvaaYqVSGEYaMIkaAa~--~G--~-i---D~~~~vlEsL~~~kRAGAd~IiTYf 415 (428)
|+..=-- ....+++|.+ +| + | ... ..-+.+.-+++.||-+|+...
T Consensus 271 pISIDT~--~~~VaeaAL~~~aGa~i~INDVsg~-~d~~m~~v~a~~g~~vVlMh~ 323 (442)
T 3mcm_A 271 LVSIDTR--KLEVMQKILAKHHDIIWMINDVECN-NIEQKAQLIAKYNKKYVIIHN 323 (442)
T ss_dssp EEEEECC--CHHHHHHHHHHHGGGCCEEEECCCT-THHHHHHHHHHHTCEEEEECC
T ss_pred eEEEeCC--CHHHHHHHHhhCCCCCEEEEcCCCC-CChHHHHHHHHhCCeEEEECC
Confidence 8765322 3456677777 44 4 2 221 123455567788998888553
No 426
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=32.17 E-value=1e+02 Score=33.04 Aligned_cols=131 Identities=15% Similarity=0.221 Sum_probs=73.8
Q ss_pred CceeeEEEeeCCCCcccCCCCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCC------C---CcccCcCcCCCCC
Q 014237 128 NFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDAL------K---SPTGDEAYNDNGL 198 (428)
Q Consensus 128 dLI~PlFV~eg~~~~~I~SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~------K---D~~Gs~A~~~~g~ 198 (428)
-.||=|+|..=.... ++.|.-++-.+. .+.+.+..+.++||++|-|-|+-+... | +..++..|++-+.
T Consensus 179 ~vIYe~hv~~f~~~~--~~~~~~~~Gt~~-gl~~~l~yLk~LGvt~V~L~Pi~~~~~~~~~~~~~~~g~~~~wGY~~~dy 255 (750)
T 1bf2_A 179 DVIYEVHVRGFTEQD--TSIPAQYRGTYY-GAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENY 255 (750)
T ss_dssp CCEEEECHHHHHTTC--TTSCGGGTTSHH-HHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCS
T ss_pred cEEEEEEhhHhhCcC--CCCCccCCcCHH-HHHHHHHHHHHcCCCEEEECCcccCccccccccccccccccccCcCcccc
Confidence 467777775311100 112222334554 688889999999999999988643211 1 1113334443322
Q ss_pred -------------------HHHHHHHHHHHCCCeEEEeeecccCCCCCCcce-------------------ee--cCC--
Q 014237 199 -------------------VPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDG-------------------IV--RED-- 236 (428)
Q Consensus 199 -------------------v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcG-------------------il--~~~-- 236 (428)
+.+.|++++++ .|-||-||-+-.....++.| .. ..+
T Consensus 256 ~~~~~~yGt~~~~~~~~~efk~lV~~~H~~--Gi~VilDvV~NH~~~~~~~~~~d~~~~p~~~~~~~d~~~~y~~~~~~~ 333 (750)
T 1bf2_A 256 FSPDRRYAYNKAAGGPTAEFQAMVQAFHNA--GIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQ 333 (750)
T ss_dssp SCBCGGGCSCCSTTHHHHHHHHHHHHHHHT--TCEEEEEECCSSCTTCSBSSSSCSSCBBCSSHHHHHHHHHBCBCTTSS
T ss_pred cccCccccCCCCCccHHHHHHHHHHHHHHC--CCEEEEEEecccccCcccccccccccCCCcccccCCCCcceEECCCCC
Confidence 22344444444 79999999987655444433 00 000
Q ss_pred ------C-----ccccHHHHHHHHHHHHHHHH-cCCCee
Q 014237 237 ------G-----VIMNDETVHQLCKQAVSQAR-AGADVV 263 (428)
Q Consensus 237 ------g-----~IdND~Tl~~Lak~Als~A~-AGADiV 263 (428)
| ...|.+..+.|...+.-.++ -|+|-+
T Consensus 334 ~~~~~~g~~~~ln~~~p~V~~~i~d~l~~W~~e~gvDGf 372 (750)
T 1bf2_A 334 YFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGF 372 (750)
T ss_dssp SBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCEE
T ss_pred ceecCCCcCCccccCCHHHHHHHHHHHHHHHHHcCCcEE
Confidence 1 13456777778887777777 788743
No 427
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=32.17 E-value=1.1e+02 Score=27.81 Aligned_cols=126 Identities=17% Similarity=0.084 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHcCCCeecCCCCCCchHH-HHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCcccc
Q 014237 243 ETVHQLCKQAVSQARAGADVVSPSDMMDGRVG-AIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTY 321 (428)
Q Consensus 243 ~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~-aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktY 321 (428)
.-.+.-.+.+-..|++|..+|. +.--|-=+ +-|.+|+..| .-++|+ |+.+-. -.+.+ +
T Consensus 42 ~~~~~A~~lg~~LA~~G~~vVs--Gg~~GiM~aa~~gAl~~GG-~~iGVl------------P~e~~~---~~~~~---~ 100 (195)
T 1rcu_A 42 ELRDICLELGRTLAKKGYLVFN--GGRDGVMELVSQGVREAGG-TVVGIL------------PDEEAG---NPYLS---V 100 (195)
T ss_dssp GGHHHHHHHHHHHHHTTCEEEE--CCSSHHHHHHHHHHHHTTC-CEEEEE------------STTCCC---CTTCS---E
T ss_pred HHHHHHHHHHHHHHHCCCEEEe--CCHHHHHHHHHHHHHHcCC-cEEEEe------------CCcccC---CCCcc---e
Confidence 5556666777888999999998 55555444 4567776666 578887 432111 11222 1
Q ss_pred CCCCCChHHHHHHHHhchhcCCceEEecCCCc-hHHHHHHHHhhCCCCeEEEEechHHH-HHHHHHHCC-CCchh
Q 014237 322 QMNPANYREALVEAQADESEGADILLVKPGLP-YLDVIRLLRDKYPLPIAAYQVSGEYS-MIKAGGALK-MIDEQ 393 (428)
Q Consensus 322 QmdpaN~~EAlrE~~lDi~EGADilMVKPal~-YLDII~~vk~~~~lPvaaYqVSGEYa-MIkaAa~~G-~iD~~ 393 (428)
-+... ..-..|... +.+=||.++|=||.. -||=+.++-+ .+.||++++++|-|. .++...+.| +++.+
T Consensus 101 ~~~~~-~~f~~Rk~~--m~~~sda~IvlpGG~GTL~E~~eal~-~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~ 171 (195)
T 1rcu_A 101 AVKTG-LDFQMRSFV--LLRNADVVVSIGGEIGTAIEILGAYA-LGKPVILLRGTGGWTDRISQVLIDGKYLDNR 171 (195)
T ss_dssp EEECC-CCHHHHHHH--HHTTCSEEEEESCCHHHHHHHHHHHH-TTCCEEEETTSCHHHHHGGGGCBTTTBSSTT
T ss_pred eeecC-CCHHHHHHH--HHHhCCEEEEecCCCcHHHHHHHHHh-cCCCEEEECCCCccHHHHHHHHHcCCcCCHH
Confidence 11110 011223333 566789999999973 2666666554 589999999999997 555555566 66554
No 428
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=31.91 E-value=1e+02 Score=29.55 Aligned_cols=33 Identities=21% Similarity=0.444 Sum_probs=26.0
Q ss_pred hhcCCceEEecC---C-----CchHHHHHHHHhhCCCCeEE
Q 014237 339 ESEGADILLVKP---G-----LPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 339 i~EGADilMVKP---a-----l~YLDII~~vk~~~~lPvaa 371 (428)
.+.|+|.|.|-. + .+-+++++++++..++||.+
T Consensus 141 ~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPvia 181 (326)
T 3bo9_A 141 ERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIA 181 (326)
T ss_dssp HHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEE
T ss_pred HHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEE
Confidence 357999999954 1 35679999999999999865
No 429
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=31.74 E-value=89 Score=30.58 Aligned_cols=123 Identities=14% Similarity=0.131 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccC--cCcCCCCC------------HHHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGD--EAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs--~A~~~~g~------------v~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
++.+.+..+.++|+++|-|=|+.+....+..|. ..|++-.. +.+.|+.++++ .|-||.|+-+-.
T Consensus 31 ~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~--Gi~vi~D~V~NH 108 (449)
T 3dhu_A 31 GVTADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHEL--GMKVMLDIVYNH 108 (449)
T ss_dssp HHHTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSE
T ss_pred HHHHhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEccCc
Confidence 688899999999999999988654322222222 23554443 23455555554 799999998743
Q ss_pred CCCC-------------Ccceeec---C--CC----ccccHHHHHHHHHHHHHHHHcCCCee---cCCCCCCchHHHHHH
Q 014237 224 YSSD-------------GHDGIVR---E--DG----VIMNDETVHQLCKQAVSQARAGADVV---SPSDMMDGRVGAIRA 278 (428)
Q Consensus 224 YTsh-------------GHcGil~---~--~g----~IdND~Tl~~Lak~Als~A~AGADiV---APSDMMDGRV~aIR~ 278 (428)
-+.. ..+|-.. . ++ .-.|.+..+.+.+...-..+. +|=+ +..-|-..-+..+|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~dLn~~np~Vr~~l~~~l~~w~~~-vDGfRlDaa~~~~~~f~~~~~~ 187 (449)
T 3dhu_A 109 TSPDSVLATEHPEWFYHDADGQLTNKVGDWSDVKDLDYGHHELWQYQIDTLLYWSQF-VDGYRCDVAPLVPLDFWLEARK 187 (449)
T ss_dssp ECTTSHHHHHCGGGBCBCTTSCBCCSSTTCTTCEEBCTTSHHHHHHHHHHHHHHTTT-CSEEEETTGGGSCHHHHHHHHH
T ss_pred CcCccchhhcCccceEECCCCCcCCCCCCCCCCCccCCCCHHHHHHHHHHHHHHHHh-CCEEEEEChhhCCHHHHHHHHH
Confidence 3221 1111110 0 01 124677777777777767666 5532 233333355678888
Q ss_pred HHHHC
Q 014237 279 ALDAE 283 (428)
Q Consensus 279 aLD~~ 283 (428)
.+.+.
T Consensus 188 ~~~~~ 192 (449)
T 3dhu_A 188 QVNAK 192 (449)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88664
No 430
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=31.65 E-value=37 Score=30.85 Aligned_cols=28 Identities=25% Similarity=0.456 Sum_probs=20.2
Q ss_pred CCceEEecCCCchHHHHHHHHhhCCCCeEEEE
Q 014237 342 GADILLVKPGLPYLDVIRLLRDKYPLPIAAYQ 373 (428)
Q Consensus 342 GADilMVKPal~YLDII~~vk~~~~lPvaaYq 373 (428)
+.+ +.+.|...|| +.+|+.+++|+.+=+
T Consensus 33 ~~~-~~~~~~~~~l---~~v~~~~~~~v~aqd 60 (219)
T 2h6r_A 33 GIT-IGVAPQFVDL---RMIVENVNIPVYAQH 60 (219)
T ss_dssp TCC-EEEECCTTTH---HHHHHHCCSCBEESC
T ss_pred CCc-EEEECCHHHH---HHHHHHcCCcEEEEE
Confidence 455 5678888888 555666799999843
No 431
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=31.55 E-value=57 Score=31.14 Aligned_cols=163 Identities=15% Similarity=0.134 Sum_probs=92.0
Q ss_pred HHHHHHHHCC--CeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCC-C----------
Q 014237 202 TIWLLKDRYP--DLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSD-M---------- 268 (428)
Q Consensus 202 AIr~iK~~~P--dl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSD-M---------- 268 (428)
..|.|++..| +++-+.|.+-+|| |.=+-|+-.+++.+.+-.+.++|||+|.=-. -
T Consensus 39 v~~~i~~~lP~e~~iy~~D~a~~PY------------G~ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa~~~al~~lr 106 (274)
T 3uhf_A 39 VLKSLYEARLFDEIIYYGDTARVPY------------GVKDKDTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDALR 106 (274)
T ss_dssp HHHHHHHTTCCSEEEEEECTTTCCC------------TTSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHHHSHHHHH
T ss_pred HHHHHHHHCCCCCEEEEecCCCCCC------------CCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHH
Confidence 5788888898 4888999999999 2224455555666666666778999874211 0
Q ss_pred ------CCchH-HHHHHHHHH--CCCCCceeechhhhhccccccchhhhhcCC----------CCCCCc-cccCCCCCCh
Q 014237 269 ------MDGRV-GAIRAALDA--EGFQHVSIMSYTAKYASSFYGPFREALDSN----------PRFGDK-KTYQMNPANY 328 (428)
Q Consensus 269 ------MDGRV-~aIR~aLD~--~Gf~~v~IMSYsaKyASafYGPFRdAa~Sa----------p~fgDR-ktYQmdpaN~ 328 (428)
.=|-| .+++.+... .+..+|+||+=.+--.|.+|- +.+... |.|-.. ..-..+-...
T Consensus 107 ~~~~iPvigiiepa~~~a~~~~~t~~~~IGVLaT~~Ti~s~~Y~---~~l~~~~~~~V~~~~~~~lV~~IE~g~~~~~~~ 183 (274)
T 3uhf_A 107 AKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQ---KRLLSQGYTNINALATGLFVPMVEEGIFEGDFL 183 (274)
T ss_dssp HHCSSCEECSHHHHHHHHHHHHCCTTSCEEEEECHHHHHHTHHH---HHHHTTTCCCEEEEECTTHHHHHHTTCCSSHHH
T ss_pred HhcCCCEEcCCHHHHHHHHHhcccCCCeEEEEeccccccHHHHH---HHHHHcCCceEEecCCHHHHHHHHcCCCCCHHH
Confidence 11555 566777766 566789999877777776663 222221 111000 0000011123
Q ss_pred HHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhC--CCCeEEEEechHHHHHHHHH
Q 014237 329 REALVEAQADESEGADILLVKPGLPYLDVIRLLRDKY--PLPIAAYQVSGEYSMIKAGG 385 (428)
Q Consensus 329 ~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~--~lPvaaYqVSGEYaMIkaAa 385 (428)
++.+++....+. |+|.|+.= =.-|--+...+++.+ ++|+ |.+-.++.+++.
T Consensus 184 ~~~~~~~l~~l~-g~D~iILG-CTh~PlL~~~i~~~~~~~v~l----IDs~~~~A~~~~ 236 (274)
T 3uhf_A 184 QSAMEYYFKNIT-TPDALILA-CTHFPLLGRSLSKYFGDKTKL----IHSGDAIVEFLK 236 (274)
T ss_dssp HHHHHHHHTTCC-CCSEEEEC-STTGGGGHHHHHHHHCTTCEE----EEHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCCEEEEC-CCChHHHHHHHHHHcCCCCEE----EcCHHHHHHHHH
Confidence 556666666666 88877652 123333344444444 3443 455555555543
No 432
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=31.50 E-value=2.1e+02 Score=25.42 Aligned_cols=61 Identities=16% Similarity=0.105 Sum_probs=42.0
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCC
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMI 390 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~i 390 (428)
|..||+..... +.-|+|++= |.+.=+++++.+|+.. .+|+.++.-...-.....+.+.|..
T Consensus 161 ~~~eal~~l~~---~~~dlvl~D~~mp~~~G~~l~~~ir~~~~~~piI~lt~~~~~~~~~~~~~~G~~ 225 (254)
T 2ayx_A 161 DGVDALNVLSK---NHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMD 225 (254)
T ss_dssp CSHHHHHHHHH---SCCSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEEESSTTSHHHHHHHHCCCE
T ss_pred CHHHHHHHHHh---CCCCEEEEcCCCCCCCHHHHHHHHHhcCCCCcEEEEECCCCHHHHHHHHHcCCc
Confidence 55677766542 357888864 7777889999999865 6999988665544455555555543
No 433
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=31.47 E-value=72 Score=30.57 Aligned_cols=32 Identities=16% Similarity=0.338 Sum_probs=22.9
Q ss_pred hcCCceEEe--------------cC----------CCchHHHHHHHHhhC-CCCeEE
Q 014237 340 SEGADILLV--------------KP----------GLPYLDVIRLLRDKY-PLPIAA 371 (428)
Q Consensus 340 ~EGADilMV--------------KP----------al~YLDII~~vk~~~-~lPvaa 371 (428)
+-|||.|.| ++ +++-.+.|+++++.. ++||.+
T Consensus 200 ~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia 256 (349)
T 1p0k_A 200 EAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIA 256 (349)
T ss_dssp HHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEE
T ss_pred HcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEE
Confidence 569999999 43 356677888888776 688764
No 434
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=31.33 E-value=73 Score=24.55 Aligned_cols=61 Identities=13% Similarity=0.241 Sum_probs=38.9
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-----CCC-eEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-----PLP-IAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-----~lP-vaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... +..|+|++- |++.=+++++.+++.. ..| +....-+++......+.+.|..|
T Consensus 39 ~~~~a~~~~~----~~~dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~ 108 (136)
T 1dcf_A 39 SNEECLRVVS----HEHKVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDG 108 (136)
T ss_dssp SHHHHHHHCC----TTCSEEEEECCSSTTTTTHHHHHHHHHHC-CCSCCCEEEEEESCCSHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHh----ccCCEEEEeCCCCCCcHHHHHHHHHHhhhhccCCCceEEEEeCCCCHHHHHHHHHcCCCe
Confidence 5566665432 223888876 5555678999998532 244 66676666677666677777644
No 435
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=31.22 E-value=47 Score=26.22 Aligned_cols=64 Identities=14% Similarity=0.188 Sum_probs=40.0
Q ss_pred CCChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 325 PANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 325 paN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
..|..||+..+. ++..|+|++= |++.=+|+++.+++.. .+|+....-+.+-..+..+.+.|..|
T Consensus 35 ~~~~~~al~~~~---~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~ 102 (141)
T 3cu5_A 35 ADDGINAIQIAL---KHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIR 102 (141)
T ss_dssp ESSHHHHHHHHT---TSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCE
T ss_pred cccHHHHHHHHh---cCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccE
Confidence 346778777654 2457999875 6666789999999876 58998876555544444555555543
No 436
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=31.17 E-value=1e+02 Score=29.99 Aligned_cols=53 Identities=26% Similarity=0.430 Sum_probs=32.8
Q ss_pred hcCCceEEecC----------CCchHHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhccc
Q 014237 340 SEGADILLVKP----------GLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGAD 409 (428)
Q Consensus 340 ~EGADilMVKP----------al~YLDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd 409 (428)
+.|+|+|.+-. .....| |..+++.+++||.+ | |..+.+. ...+..+|||
T Consensus 176 ~agad~i~i~~~~~~~~~~~~~~~~~~-i~~l~~~~~~pvi~----g-----------gi~t~e~-----a~~~~~~Gad 234 (393)
T 2qr6_A 176 KAGADLLVIQGTLISAEHVNTGGEALN-LKEFIGSLDVPVIA----G-----------GVNDYTT-----ALHMMRTGAV 234 (393)
T ss_dssp HTTCSEEEEECSSCCSSCCCC-----C-HHHHHHHCSSCEEE----E-----------CCCSHHH-----HHHHHTTTCS
T ss_pred HCCCCEEEEeCCccccccCCCcccHHH-HHHHHHhcCCCEEE----C-----------CcCCHHH-----HHHHHHcCCC
Confidence 46999987642 123445 67888889999987 2 4445432 2344568999
Q ss_pred Eeeh
Q 014237 410 IILT 413 (428)
Q Consensus 410 ~IiT 413 (428)
.|+.
T Consensus 235 ~i~v 238 (393)
T 2qr6_A 235 GIIV 238 (393)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 437
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=31.05 E-value=1.3e+02 Score=29.14 Aligned_cols=63 Identities=11% Similarity=0.188 Sum_probs=49.9
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCch
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDE 392 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~ 392 (428)
|..||+..+. ++.-|+|++= |++.=+++++.+|+.. .+|+...--.++-.....|.+.|..|.
T Consensus 32 ~~~eal~~l~---~~~~DlvllD~~mp~~dG~ell~~lr~~~~~~pvIvlT~~~~~~~~~~a~~~Ga~dy 98 (387)
T 1ny5_A 32 RGKEAYKLLS---EKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDF 98 (387)
T ss_dssp SHHHHHHHHH---HSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEEETTCHHHHHHHHTTTCCEE
T ss_pred CHHHHHHHHH---hCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHhcCceEE
Confidence 5677776654 3467999875 7777899999999877 589999888888888888889998663
No 438
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=30.88 E-value=25 Score=33.01 Aligned_cols=51 Identities=24% Similarity=0.455 Sum_probs=39.0
Q ss_pred CCCCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEe
Q 014237 145 GAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYT 217 (428)
Q Consensus 145 ~SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vit 217 (428)
..|||+. -..|+..++++|..-|-+||- . ..| | ...|+.|+.-||++-++.
T Consensus 114 ~~~PG~~-------TptE~~~A~~~Gad~vK~FPa-~-----~~g-------G--~~~lkal~~p~p~i~~~p 164 (217)
T 3lab_A 114 VFLPGVA-------TASEVMIAAQAGITQLKCFPA-S-----AIG-------G--AKLLKAWSGPFPDIQFCP 164 (217)
T ss_dssp EEEEEEC-------SHHHHHHHHHTTCCEEEETTT-T-----TTT-------H--HHHHHHHHTTCTTCEEEE
T ss_pred eEeCCCC-------CHHHHHHHHHcCCCEEEECcc-c-----ccc-------C--HHHHHHHHhhhcCceEEE
Confidence 7889881 367888999999999999973 1 111 2 478999999999977664
No 439
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=30.85 E-value=30 Score=32.28 Aligned_cols=44 Identities=23% Similarity=0.286 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCCCeecCC-----CC-CCch--HHHHHHHHHHCCCCCceeech
Q 014237 249 CKQAVSQARAGADVVSPS-----DM-MDGR--VGAIRAALDAEGFQHVSIMSY 293 (428)
Q Consensus 249 ak~Als~A~AGADiVAPS-----DM-MDGR--V~aIR~aLD~~Gf~~v~IMSY 293 (428)
..||+.-|+|||++|+|= |. .||. |..|++.++..|| ++-||.=
T Consensus 114 ~~QA~~aa~AGa~~iSpfvgRidd~g~~G~~~i~~~~~~y~~~~~-~t~il~A 165 (220)
T 1l6w_A 114 AAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAP-QAKVLAA 165 (220)
T ss_dssp HHHHHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHCT-TCEEEEB
T ss_pred HHHHHHHHHCCCeEEEeccchhhcccccHHHHHHHHHHHHHhcCC-CeEEeec
Confidence 457999999999999992 11 2343 6777888888886 6666643
No 440
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=30.79 E-value=38 Score=31.64 Aligned_cols=44 Identities=34% Similarity=0.502 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCCeecCC-----CC-CCc--hHHHHHHHHHHCCCCCceeech
Q 014237 249 CKQAVSQARAGADVVSPS-----DM-MDG--RVGAIRAALDAEGFQHVSIMSY 293 (428)
Q Consensus 249 ak~Als~A~AGADiVAPS-----DM-MDG--RV~aIR~aLD~~Gf~~v~IMSY 293 (428)
..||+.-|+|||++|+|= |. .|| .|..|++.++..|| ++-||.=
T Consensus 121 ~~Qa~~aa~AGa~~iSpFVgRidd~g~~G~~~v~~i~~~~~~~~~-~t~vl~A 172 (223)
T 1wx0_A 121 ANQALLAARAGASYVSPFLGRVDDISWDGGELLREIVEMIQVQDL-PVKVIAA 172 (223)
T ss_dssp HHHHHHHHHTTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHTTC-SCEEEEB
T ss_pred HHHHHHHHHCCCeEEEeccchHhhcCCCHHHHHHHHHHHHHHcCC-CeEEeec
Confidence 358888899999999992 11 134 36778888888886 6666653
No 441
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=30.66 E-value=57 Score=31.31 Aligned_cols=69 Identities=14% Similarity=0.211 Sum_probs=44.2
Q ss_pred eechhhhHHHHHHH-HHHcCCCeEEEeecCCCCCCCcccC---cCcCCCCC-----------HHHHHHHHHHHCCCeEEE
Q 014237 152 RLGWRHGLVQEVAK-ARDVGVNSVVLFPKVPDALKSPTGD---EAYNDNGL-----------VPRTIWLLKDRYPDLVIY 216 (428)
Q Consensus 152 r~s~~~~l~~~v~~-~~~~GI~sv~LFgvi~~~~KD~~Gs---~A~~~~g~-----------v~rAIr~iK~~~Pdl~Vi 216 (428)
-|..+ +|.+++.+ +.++|+.+|-|=|+......+..|. +.|++-.. ..+.|++++++ .|-||
T Consensus 18 ~W~w~-~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~--Gi~Vi 94 (496)
T 4gqr_A 18 EWRWV-DIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNV--GVRIY 94 (496)
T ss_dssp TCCHH-HHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHT--TCEEE
T ss_pred CCCHH-HHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHC--CCEEE
Confidence 34565 58888877 9999999999988532111111122 23443222 45667777666 69999
Q ss_pred eeecccC
Q 014237 217 TDVALDP 223 (428)
Q Consensus 217 tDVcLc~ 223 (428)
.|+-+-+
T Consensus 95 lD~V~NH 101 (496)
T 4gqr_A 95 VDAVINH 101 (496)
T ss_dssp EEECCSE
T ss_pred EEEccCc
Confidence 9998765
No 442
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=30.65 E-value=35 Score=30.59 Aligned_cols=58 Identities=22% Similarity=0.417 Sum_probs=0.0
Q ss_pred CCCCCCCccccCCCCC-ChHHHHHHHHhchhc-CCceEEecCCCchHHHHHHHHhhCCCCe
Q 014237 311 SNPRFGDKKTYQMNPA-NYREALVEAQADESE-GADILLVKPGLPYLDVIRLLRDKYPLPI 369 (428)
Q Consensus 311 Sap~fgDRktYQmdpa-N~~EAlrE~~lDi~E-GADilMVKPal~YLDII~~vk~~~~lPv 369 (428)
|.|.|.||..||.+-. +..+.+.++..-+++ |+|+|.+==...- =.+.++++.+++|+
T Consensus 41 ~~~~i~~r~~~~~~~~~~~~~~l~~~~~~l~~~g~d~iviaCnTa~-~~~~~l~~~~~iPv 100 (228)
T 1jfl_A 41 NNPQIPDRTAYILGKGEDPRPQLIWTAKRLEECGADFIIMPCNTAH-AFVEDIRKAIKIPI 100 (228)
T ss_dssp ECTTSCCHHHHHTTSSCCCHHHHHHHHHHHHHHTCSEEECSCTGGG-GGHHHHHHHCSSCB
T ss_pred eCCCHHHHHHHHHcCCchHHHHHHHHHHHHHHcCCCEEEEcCccHH-HHHHHHHHhCCCCE
No 443
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=30.48 E-value=2.3e+02 Score=24.99 Aligned_cols=107 Identities=11% Similarity=0.047 Sum_probs=62.4
Q ss_pred ceeechhhhhccccccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCC-ceEEecCCCchHH-HHHHHHhhC
Q 014237 288 VSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGA-DILLVKPGLPYLD-VIRLLRDKY 365 (428)
Q Consensus 288 v~IMSYsaKyASafYGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGA-DilMVKPal~YLD-II~~vk~~~ 365 (428)
+-.+.|++..++.+||.+.+.+... ..++ -+|+.++... -|+ -+-++=|...-+. ..++.-+..
T Consensus 67 ~d~ivi~Cnt~~~~~g~~~~~l~~~--------~~iP----~~a~~~a~~~--~g~~rvgvlt~~~~~~~~~~~~~l~~~ 132 (223)
T 2dgd_A 67 SDIIIYGRTYGTHKHAHVIKRVIKD--------VVIP----EESVYELLKK--LNVRKLWIGTPYIKERTLEEVEWWRNK 132 (223)
T ss_dssp CSEEEECCCTTTTTCHHHHHHHSTT--------CBCH----HHHHHHHHHH--TTCCEEEEEESSCHHHHHHHHHHHHTT
T ss_pred CCEEEEcCCHHHHhhhHHHHHHHHh--------cCCC----HHHHHHHHHH--cCCCeEEEEeCCchHHHHHHHHHHHhC
Confidence 3445577777888888776666332 2233 5666665532 353 3555534433322 444343445
Q ss_pred CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHh--cccEeeh
Q 014237 366 PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRA--GADIILT 413 (428)
Q Consensus 366 ~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRA--GAd~IiT 413 (428)
++.+....-.|-+..++.+ -+++ +.+.+....+... |||.||-
T Consensus 133 G~~v~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~l~~~~~gadaIvL 177 (223)
T 2dgd_A 133 GFEIVGYDGLGKIRGIDIS----NTPI-FTIYRLVKRHLNEVLKADAVYI 177 (223)
T ss_dssp TCEEEEEEECCCCSHHHHH----TCCH-HHHHHHHHTTHHHHTTSSEEEE
T ss_pred CcEEecccCCCCCCcchhh----ccCH-HHHHHHHHHHhcccCCCCEEEE
Confidence 6777666666655444433 4454 4577888888888 9999983
No 444
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=30.41 E-value=80 Score=22.92 Aligned_cols=47 Identities=17% Similarity=0.203 Sum_probs=33.3
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhh---CCCCeEEEEech
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDK---YPLPIAAYQVSG 376 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~---~~lPvaaYqVSG 376 (428)
|..+|+.... ++..|++++= |+..-+++++.+++. ..+|+..+.-++
T Consensus 33 ~~~~~~~~l~---~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~ 85 (119)
T 2j48_A 33 DGSTALDQLD---LLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEP 85 (119)
T ss_dssp CHHHHHHHHH---HHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSC
T ss_pred CHHHHHHHHH---hcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCC
Confidence 5566665554 2467988875 666779999999987 468998876543
No 445
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp}
Probab=30.05 E-value=2e+02 Score=29.01 Aligned_cols=92 Identities=14% Similarity=0.159 Sum_probs=61.0
Q ss_pred HHHHHHHHHCCCeEEEeeecccCC--CCCCc---ceeecCCCccccHHHHHHHHHHHHHHHHcCCCeec-----------
Q 014237 201 RTIWLLKDRYPDLVIYTDVALDPY--SSDGH---DGIVREDGVIMNDETVHQLCKQAVSQARAGADVVS----------- 264 (428)
Q Consensus 201 rAIr~iK~~~Pdl~VitDVcLc~Y--TshGH---cGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVA----------- 264 (428)
.-++.+|+..|++.|++..-=.|. ++.|+ -|-|+. . .-+.--..|++-.-.+.+.|.+|-+
T Consensus 125 ~~lk~A~~~~~~l~i~aspWSpP~wMk~n~~~~~gg~L~~-~--~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~ 201 (447)
T 2wnw_A 125 PLISGALRLNPHMKLMASPWSPPAFMKTNNDMNGGGKLRR-E--CYADWADIIINYLLEYRRHGINVQALSVQNEPVAVK 201 (447)
T ss_dssp HHHHHHHHHCTTCEEEEEESCCCGGGBTTSCSBSCCBBCG-G--GHHHHHHHHHHHHHHHHHTTCCCCEEESCSSTTCCC
T ss_pred HHHHHHHHhCCCcEEEEecCCCcHHhccCCCcCCCCcCCH-H--HHHHHHHHHHHHHHHHHHcCCCeeEEeeeccCCCCC
Confidence 456777777899999988876663 44443 233321 0 1234456788888888889998654
Q ss_pred --CCCCCCch-----HH-HHHHHHHHCCCCCceeechhh
Q 014237 265 --PSDMMDGR-----VG-AIRAALDAEGFQHVSIMSYTA 295 (428)
Q Consensus 265 --PSDMMDGR-----V~-aIR~aLD~~Gf~~v~IMSYsa 295 (428)
||--|+.. |+ .++.+|+++|+.+|-||.+=.
T Consensus 202 ~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~kI~~~D~ 240 (447)
T 2wnw_A 202 TWDSCLYSVEEETAFAVQYLRPRLARQGMDEMEIYIWDH 240 (447)
T ss_dssp SSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTCEEEEEEE
T ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEeCC
Confidence 22234432 55 678899999998999987654
No 446
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=29.99 E-value=1.2e+02 Score=28.15 Aligned_cols=81 Identities=22% Similarity=0.319 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCC--eEEEeeecccCCCCCCcceeecC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVRE 235 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pd--l~VitDVcLc~YTshGHcGil~~ 235 (428)
..+.++++++++|-..|-+--.+. ..|+ | ....+.+-|+.+++..++ |=||-..|+
T Consensus 72 ~k~~e~~~Ai~~GAdevd~vinig-~~~~--g-----~~~~v~~ei~~v~~a~~~~~lkvIlet~~-------------- 129 (220)
T 1ub3_A 72 VKALEAALACARGADEVDMVLHLG-RAKA--G-----DLDYLEAEVRAVREAVPQAVLKVILETGY-------------- 129 (220)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCHH-HHHT--T-----CHHHHHHHHHHHHHHSTTSEEEEECCGGG--------------
T ss_pred HHHHHHHHHHHcCCCEEEecccch-hhhC--C-----CHHHHHHHHHHHHHHHcCCCceEEEecCC--------------
Confidence 578999999999999998732221 1221 1 224567788888888754 445555554
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCC
Q 014237 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSD 267 (428)
Q Consensus 236 ~g~IdND~Tl~~Lak~Als~A~AGADiVAPSD 267 (428)
. +|+-+...++.| +++|||+|=-|-
T Consensus 130 ---l-~~e~i~~a~~ia---~eaGADfVKTsT 154 (220)
T 1ub3_A 130 ---F-SPEEIARLAEAA---IRGGADFLKTST 154 (220)
T ss_dssp ---S-CHHHHHHHHHHH---HHHTCSEEECCC
T ss_pred ---C-CHHHHHHHHHHH---HHhCCCEEEeCC
Confidence 2 355555555555 589999998883
No 447
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=29.83 E-value=55 Score=30.17 Aligned_cols=51 Identities=27% Similarity=0.473 Sum_probs=36.2
Q ss_pred cCCCCCceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEE
Q 014237 144 IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIY 216 (428)
Q Consensus 144 I~SMPGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~Vi 216 (428)
++.+||+ . -.+++.++.+.|...|.+||. + ..| | ...++.++..+|++-++
T Consensus 111 ~~~i~Gv-----~--t~~e~~~A~~~Gad~vk~Fpa-~-----~~g-------G--~~~lk~l~~~~~~ipvv 161 (224)
T 1vhc_A 111 FPITPGV-----N--NPMAIEIALEMGISAVKFFPA-E-----ASG-------G--VKMIKALLGPYAQLQIM 161 (224)
T ss_dssp CCEECEE-----C--SHHHHHHHHHTTCCEEEETTT-T-----TTT-------H--HHHHHHHHTTTTTCEEE
T ss_pred CCEEecc-----C--CHHHHHHHHHCCCCEEEEeeC-c-----ccc-------C--HHHHHHHHhhCCCCeEE
Confidence 5678884 1 256788899999999999982 1 010 1 56889999999876553
No 448
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=29.74 E-value=35 Score=35.04 Aligned_cols=166 Identities=25% Similarity=0.315 Sum_probs=92.3
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCeecCC--CCCC-chHHHHHHHHHHCCCCCceeec---hh-----------hhhccc
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVVSPS--DMMD-GRVGAIRAALDAEGFQHVSIMS---YT-----------AKYASS 300 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiVAPS--DMMD-GRV~aIR~aLD~~Gf~~v~IMS---Ys-----------aKyASa 300 (428)
.-|-++|++++ ..+++||||+|==+ ||=| --+..||+.|+..|+ +|++++ |- +.....
T Consensus 34 T~Dv~aTv~QI----~~L~~aG~eiVRvaVp~~~~A~al~~I~~~l~~~~~-~vPLVADiHF~~~~al~a~~~~a~~~dk 108 (406)
T 4g9p_A 34 TRDVEATTAQV----LELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGV-EVPLVGDFHFNGHLLLRKYPKMAEALDK 108 (406)
T ss_dssp TTCHHHHHHHH----HHHHHHTCSEEEEECCSHHHHHHHHHHHHHHHHTTC-CCCEEEECCSSHHHHHHHCHHHHHHCSE
T ss_pred cccHHHHHHHH----HHHHHcCCCEEEEecCCHHHHHhHHHHHHHHHhcCC-CCceEeeecccHHHHHHHHHHHHhHHhh
Confidence 34556676554 66789999998422 3333 236789999999996 888876 11 111111
Q ss_pred ------ccc-------chhhhhcCCCC---------------------CCCccccCCCCCC----hHHHHHHHHhch---
Q 014237 301 ------FYG-------PFREALDSNPR---------------------FGDKKTYQMNPAN----YREALVEAQADE--- 339 (428)
Q Consensus 301 ------fYG-------PFRdAa~Sap~---------------------fgDRktYQmdpaN----~~EAlrE~~lDi--- 339 (428)
=+| -|++.++.+-. +||+....-.|.. ..|||.|.+++.
T Consensus 109 iRINPGNig~~~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~ 188 (406)
T 4g9p_A 109 FRINPGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEA 188 (406)
T ss_dssp EEECTTSSCSTHHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCccccCccccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHH
Confidence 122 24433332111 1111111222322 337777777642
Q ss_pred --hcCC---ce-EEecCCCch--HHHHHHHHhhCCCCeEEEEe------chHHHHHHHHHHCCCC------c--------
Q 014237 340 --SEGA---DI-LLVKPGLPY--LDVIRLLRDKYPLPIAAYQV------SGEYSMIKAGGALKMI------D-------- 391 (428)
Q Consensus 340 --~EGA---Di-lMVKPal~Y--LDII~~vk~~~~lPvaaYqV------SGEYaMIkaAa~~G~i------D-------- 391 (428)
++|= |+ |=+|=.-.. ...-|.+.++++.|+ |+ .|+...||.|+..|.+ |
T Consensus 189 ~~~~~f~~~~iviS~KaSdv~~~i~aYr~la~~~dyPL---HLGvTEAG~~~~G~IKSaigiG~LL~~GIGDTIRVSLT~ 265 (406)
T 4g9p_A 189 ALEMGLGEDKLVLSAKVSKARDLVWVYRELARRTQAPL---HLGLTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTP 265 (406)
T ss_dssp HHHHTCCGGGEEEEEECSSHHHHHHHHHHHHHHCCSCB---EECCTTCBSHHHHHHHHHHHHHHHHHTTCCSEEECCBCC
T ss_pred HHHcCCChhheEEEeecCCHHHHHHHHHHHHHhCCCCc---eeeeecCCCcccceechHHHHHHHHhccCchhEEeeccC
Confidence 2354 23 445765433 355567788898886 43 4788899998765532 2
Q ss_pred --------hhhHHHHHHHHHH--HhcccEe
Q 014237 392 --------EQRVMMESLMCLR--RAGADII 411 (428)
Q Consensus 392 --------~~~~vlEsL~~~k--RAGAd~I 411 (428)
|=++-.|.|.++. .-|..+|
T Consensus 266 dP~e~~~~EV~va~~ILqslglR~~~~~ii 295 (406)
T 4g9p_A 266 SPKEPRTKEVEVAQEILQALGLRAFAPEVT 295 (406)
T ss_dssp CTTSCTTHHHHHHHHHHHHTTSCCCSCEEE
T ss_pred CCCcccHHHHHHHHHHHHHhCCcccCCCcc
Confidence 2257788887763 3466665
No 449
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=29.72 E-value=86 Score=29.18 Aligned_cols=44 Identities=16% Similarity=0.428 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEee
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTD 218 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitD 218 (428)
.+...++.+.+.|.++|.+.-.|-. +.+++.|.+.||++.|+|+
T Consensus 151 Tl~~ai~~L~~~G~~~I~~~~lv~~-----------------~~g~~~l~~~~p~v~I~t~ 194 (221)
T 1o5o_A 151 SSIKAIEILKENGAKKITLVALIAA-----------------PEGVEAVEKKYEDVKIYVA 194 (221)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSEEC-----------------HHHHHHHHHHCTTCEEEES
T ss_pred HHHHHHHHHHHcCCCEEEEEEEEeC-----------------HHHHHHHHHHCCCcEEEEE
Confidence 4889999999999999888654321 3489999999999999996
No 450
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=29.71 E-value=76 Score=32.36 Aligned_cols=91 Identities=16% Similarity=0.284 Sum_probs=56.3
Q ss_pred CCChHHHHHHHHhchhcCCceEEecCCCc----hHHHHHHHHhhCCCCe-EEEEec----------hH-HHHHHHHHHCC
Q 014237 325 PANYREALVEAQADESEGADILLVKPGLP----YLDVIRLLRDKYPLPI-AAYQVS----------GE-YSMIKAGGALK 388 (428)
Q Consensus 325 paN~~EAlrE~~lDi~EGADilMVKPal~----YLDII~~vk~~~~lPv-aaYqVS----------GE-YaMIkaAa~~G 388 (428)
..+.+|++.++....+.|||+|=..=.+. =.+-|+.+.+...+|+ +.|--. .| +..++.|.+.|
T Consensus 13 ~~~~~~~~~~~~~~~~~g~D~vElRvD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~~ 92 (523)
T 2o7s_A 13 ADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELG 92 (523)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEEEGGGCSSCCHHHHHHHHHHHCSSCEEEECCBGGGTSSBCSCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhhhcCCCEEEEEEecccccChHHHHHHHHhcCCCcEEEEecccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 34788999998888899999985543210 0335677777788995 334221 22 45677777655
Q ss_pred --CCchhhHHHHHHH----HHHHhcccEeehhc
Q 014237 389 --MIDEQRVMMESLM----CLRRAGADIILTYF 415 (428)
Q Consensus 389 --~iD~~~~vlEsL~----~~kRAGAd~IiTYf 415 (428)
++|-+--.-|.+. ..++.|..+|++|+
T Consensus 93 ~~yiDvEl~~~~~~~~~~~~~~~~~~kiI~S~H 125 (523)
T 2o7s_A 93 ADYIDVELQVASEFIKSIDGKKPGKFKVIVSSH 125 (523)
T ss_dssp CSEEEEEHHHHHHHHHHTTTCCCTTCEEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHhccCCCEEEEEcc
Confidence 4564533333222 22334788999998
No 451
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=29.65 E-value=2e+02 Score=25.25 Aligned_cols=93 Identities=13% Similarity=0.232 Sum_probs=59.4
Q ss_pred HHHcCCCeecCC----------------CCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCCc
Q 014237 255 QARAGADVVSPS----------------DMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDK 318 (428)
Q Consensus 255 ~A~AGADiVAPS----------------DMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgDR 318 (428)
.+++|.|-|=.. ++-+..+..+|+.|++.|++=+++-.| +.
T Consensus 31 ~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~--------~~--------------- 87 (262)
T 3p6l_A 31 TQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY--------VA--------------- 87 (262)
T ss_dssp HHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE--------CC---------------
T ss_pred HHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc--------CC---------------
Confidence 356788876433 344567999999999999853333322 11
Q ss_pred cccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCCCCeEEEEechH
Q 014237 319 KTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGE 377 (428)
Q Consensus 319 ktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~lPvaaYqVSGE 377 (428)
......+.+++.+. +=||+.|.+-|+--.++-+.++.++.++.++--+..++
T Consensus 88 ----~~~~~~~~~i~~A~---~lGa~~v~~~~~~~~~~~l~~~a~~~gv~l~~En~~~~ 139 (262)
T 3p6l_A 88 ----EKSSDWEKMFKFAK---AMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQP 139 (262)
T ss_dssp ----SSTTHHHHHHHHHH---HTTCSEEEECCCGGGHHHHHHHHHHHTCEEEEECCSSS
T ss_pred ----ccHHHHHHHHHHHH---HcCCCEEEecCCHHHHHHHHHHHHHhCCEEEEEeCCCc
Confidence 01112233333322 34999999999887888777777778887776666543
No 452
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=29.58 E-value=96 Score=30.32 Aligned_cols=60 Identities=18% Similarity=0.339 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCC------------HHHHHHHHHHHCCCeEEEeeecccCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALDPY 224 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~------------v~rAIr~iK~~~Pdl~VitDVcLc~Y 224 (428)
++.+.+..+.++||++|-|=|+.+. . +...|+.-.. ..+.|++++++ .|-||-|+-+-.-
T Consensus 24 gi~~~LdyL~~LGv~~I~L~Pi~~~-~----~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~--Gi~VilD~V~NH~ 95 (441)
T 1lwj_A 24 GLKNAVSYLKELGIDFVWLMPVFSS-I----SFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDS--GIKVVLDLPIHHT 95 (441)
T ss_dssp HHHHTHHHHHHTTCCEEEECCCEEC-S----SSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECTTBC
T ss_pred HHHHhhHHHHHcCCCEEEeCCCcCC-C----CCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEeCCCcc
Confidence 6888999999999999999886432 1 2234444332 34555555554 7999999987543
No 453
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=29.56 E-value=1.2e+02 Score=29.71 Aligned_cols=93 Identities=18% Similarity=0.294 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHcCCCeEEEee----------cCC--CCCCCcccCcCcCCCCCHHHHHHHHHHHCC-CeEEEeeecccCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFP----------KVP--DALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPY 224 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFg----------vi~--~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P-dl~VitDVcLc~Y 224 (428)
...+.++.+.+.|...|-|-+ . | +...|+.|..--|.--++...|+++|++++ |.-|..-+..+.|
T Consensus 144 ~f~~AA~~a~~aGfDgVEih~ahGYLl~qFls-p~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~ 222 (343)
T 3kru_A 144 AFGEAAKRANLAGYDVVEIHAAHGYLIHEFLS-PLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDY 222 (343)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHC-TTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCS
T ss_pred HHHHHHhhccccCCceEEEecccchhHHHhhc-ccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhh
Confidence 355566678889999999953 2 3 234677776555555677889999999996 7778877777665
Q ss_pred CCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC
Q 014237 225 SSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS 266 (428)
Q Consensus 225 TshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPS 266 (428)
.. +| .+ ++...+.|-.+.++ +|.|--|
T Consensus 223 ~~---------~g-~~----~~~~~~~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 223 ME---------GG-IN----IDMMVEYINMIKDK-VDLIDVS 249 (343)
T ss_dssp ST---------TS-CC----HHHHHHHHHHHTTT-CSEEEEE
T ss_pred hc---------cC-cc----HHHHHHHHHHhhcc-ccEEecc
Confidence 32 12 22 33334445556777 9998765
No 454
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=29.43 E-value=82 Score=32.07 Aligned_cols=60 Identities=23% Similarity=0.508 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCC---------CCH---HHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDN---------GLV---PRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~---------g~v---~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
++.+.+..+.++||.+|-|-|+.+. +..+..|+.- |-. .+-|++++++ .|-||-|+-+-+
T Consensus 33 gi~~~Ldyl~~LGv~~I~L~Pi~~~----~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~--Gi~VilD~V~NH 104 (557)
T 1zja_A 33 GLTEKLDYLKGLGIDAIWINPHYAS----PNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKR--GMRLMVDVVINH 104 (557)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEEC----CCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHHHHHHHHcCCCEEEECCCccC----CCCCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEeccc
Confidence 6888899999999999999886432 1122334433 222 3444445444 799999998754
No 455
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A
Probab=29.40 E-value=55 Score=32.47 Aligned_cols=22 Identities=41% Similarity=0.516 Sum_probs=18.7
Q ss_pred HHHHHHHHHcCCCeecCCCCCCchH
Q 014237 249 CKQAVSQARAGADVVSPSDMMDGRV 273 (428)
Q Consensus 249 ak~Als~A~AGADiVAPSDMMDGRV 273 (428)
..||+.-|+|||.+|+| +=|||
T Consensus 181 ~~Qa~aaa~AGa~~iSp---FVgRi 202 (337)
T 3cwn_A 181 FAQARACAEAGVFLISP---YVGRI 202 (337)
T ss_dssp HHHHHHHHHTTCSEEEE---BSHHH
T ss_pred HHHHHHHHHcCCcEEEe---echhh
Confidence 56999999999999999 55555
No 456
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=29.38 E-value=41 Score=28.25 Aligned_cols=62 Identities=18% Similarity=0.237 Sum_probs=45.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCc
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMID 391 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD 391 (428)
|..||+.... +...|+|++= |++.-+++++.+++.. .+|+....-.++...+..|.+.|..|
T Consensus 36 ~~~~al~~~~---~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~a~~~Ga~~ 101 (208)
T 1yio_A 36 CASTFLEHRR---PEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHGDIPMTVRAMKAGAIE 101 (208)
T ss_dssp SHHHHHHHCC---TTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESCTTSCCCHHHHHTTEEE
T ss_pred CHHHHHHhhh---ccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHCCCcE
Confidence 4555554432 2457888775 6667789999999876 59999988877777777788888654
No 457
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=29.36 E-value=1e+02 Score=22.82 Aligned_cols=49 Identities=29% Similarity=0.363 Sum_probs=35.1
Q ss_pred ChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhC-CCCeEEEEechHH
Q 014237 327 NYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKY-PLPIAAYQVSGEY 378 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~-~lPvaaYqVSGEY 378 (428)
|..||+.... ++..|++++= |++.=+++++.+++.. .+|+....-.+++
T Consensus 33 ~~~~a~~~~~---~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~ 85 (116)
T 3a10_A 33 NGEEALKKFF---SGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYSHY 85 (116)
T ss_dssp SHHHHHHHHH---HSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCGGG
T ss_pred CHHHHHHHHh---cCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCcch
Confidence 5667776654 2457999876 5556689999999876 5899887665554
No 458
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=29.27 E-value=1.3e+02 Score=30.23 Aligned_cols=68 Identities=16% Similarity=0.183 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHCCC---eEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHH---cCCCeecCCCCCC--
Q 014237 199 VPRTIWLLKDRYPD---LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQAR---AGADVVSPSDMMD-- 270 (428)
Q Consensus 199 v~rAIr~iK~~~Pd---l~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~---AGADiVAPSDMMD-- 270 (428)
...|++..++.+|+ +.+-+| .|.+ -.+.|+..++ +|+|+|=.-.|-.
T Consensus 193 ~~~A~~~~~~~~p~~~~~~vlvD----T~d~---------------------~~~~al~~~~~~~~~~d~IrlDs~~~~~ 247 (395)
T 2i14_A 193 QVKAWKYFDEVIEEEVPRIALVD----TFYD---------------------EKVEAVMAAEALGKKLFAVRLDTPSSRR 247 (395)
T ss_dssp HHHHHHHHHHHSCSSSCCEEECC----SSBC---------------------HHHHHHHHHTTTGGGCCEEEECCCTTTC
T ss_pred HHHHHHHHHHhCCCCccEEEEec----cchH---------------------HHHHHHHHHHHhccCCcEEEeCCCCCCc
Confidence 56899999999996 233333 3311 1122333334 7899998766633
Q ss_pred c----hHHHHHHHHHHCCCCCceee
Q 014237 271 G----RVGAIRAALDAEGFQHVSIM 291 (428)
Q Consensus 271 G----RV~aIR~aLD~~Gf~~v~IM 291 (428)
| -|..+|+.||+.||.++.|.
T Consensus 248 gd~~~~v~~~r~~ld~~G~~~~~I~ 272 (395)
T 2i14_A 248 GNFRKIIEEVRWELKVRGYDWVKIF 272 (395)
T ss_dssp SCHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred ccHHHHHHHHHHHHHhCCCCceEEE
Confidence 3 36678899999998777553
No 459
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=29.19 E-value=54 Score=30.62 Aligned_cols=66 Identities=14% Similarity=0.126 Sum_probs=43.5
Q ss_pred CCCChHHHHHHHHhchhcCCceEEe---cCCCc-------hHHHHHHHHhhC-----CCCeEEEEechHHHHHHHHHHCC
Q 014237 324 NPANYREALVEAQADESEGADILLV---KPGLP-------YLDVIRLLRDKY-----PLPIAAYQVSGEYSMIKAGGALK 388 (428)
Q Consensus 324 dpaN~~EAlrE~~lDi~EGADilMV---KPal~-------YLDII~~vk~~~-----~lPvaaYqVSGEYaMIkaAa~~G 388 (428)
+|.+..|.+. .+.+++|+|.| -|+.. -||-|+++|+.. ++|+.+ -|
T Consensus 134 ~p~Tp~~~l~----~~l~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~v---------------dG 194 (237)
T 3cu2_A 134 CPETPISELE----PYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINI---------------DG 194 (237)
T ss_dssp CTTSCGGGGT----TTTTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEE---------------ES
T ss_pred eCCChHHHHH----HHhhcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEE---------------EC
Confidence 4445444443 34568999977 88542 278888888765 466543 45
Q ss_pred CCchhhHHHHHHHHHHH--hcccEeeh
Q 014237 389 MIDEQRVMMESLMCLRR--AGADIILT 413 (428)
Q Consensus 389 ~iD~~~~vlEsL~~~kR--AGAd~IiT 413 (428)
-|+. |++..++. ||||+++.
T Consensus 195 GI~~-----~~~~~~~~~~aGad~~Vv 216 (237)
T 3cu2_A 195 SMTL-----ELAKYFKQGTHQIDWLVS 216 (237)
T ss_dssp SCCH-----HHHHHHHHSSSCCCCEEE
T ss_pred CcCH-----HHHHHHHHhCCCCcEEEE
Confidence 5664 55667899 99999873
No 460
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=29.16 E-value=70 Score=31.08 Aligned_cols=72 Identities=18% Similarity=0.338 Sum_probs=47.5
Q ss_pred HHHHHHHhch-hcCCceEEecCCCch-------------------HHHHHHHHhhCCCCeEEEEechHHHHHHHHHHCCC
Q 014237 330 EALVEAQADE-SEGADILLVKPGLPY-------------------LDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKM 389 (428)
Q Consensus 330 EAlrE~~lDi-~EGADilMVKPal~Y-------------------LDII~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~ 389 (428)
+.+.++..-+ +.|+|.|-+--+-|. ++||+.+++..++||..=- ..||
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKi------------R~g~ 137 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKM------------RLGL 137 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEE------------ESCB
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEE------------ecCc
Confidence 4444444434 458999988754333 6788999998999987611 1245
Q ss_pred Cchh--hHHHHHHHHHHHhcccEeeh
Q 014237 390 IDEQ--RVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 390 iD~~--~~vlEsL~~~kRAGAd~IiT 413 (428)
-|.. ....|....+..+|+|.|+.
T Consensus 138 ~~~~~~~~~~~~a~~l~~aG~d~I~V 163 (350)
T 3b0p_A 138 EGKETYRGLAQSVEAMAEAGVKVFVV 163 (350)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CccccHHHHHHHHHHHHHcCCCEEEE
Confidence 4432 24567778888999998864
No 461
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=29.16 E-value=82 Score=30.26 Aligned_cols=90 Identities=12% Similarity=0.185 Sum_probs=51.3
Q ss_pred HHHHHHHHcCCCeEEEeecCCCC-CCCcccCcCcCCCC---CHHHHHHHHHHHCCCeEEEeeecc---cCCCCCCcceee
Q 014237 161 QEVAKARDVGVNSVVLFPKVPDA-LKSPTGDEAYNDNG---LVPRTIWLLKDRYPDLVIYTDVAL---DPYSSDGHDGIV 233 (428)
Q Consensus 161 ~~v~~~~~~GI~sv~LFgvi~~~-~KD~~Gs~A~~~~g---~v~rAIr~iK~~~Pdl~VitDVcL---c~YTshGHcGil 233 (428)
+-++.+++.|++.|-+|....+. .+-..+. +.+. .+.++|+.+|+.. +.|-..+|. |||
T Consensus 85 ~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~---s~~e~l~~~~~~v~~ak~~G--~~v~~~i~~~~~~~~--------- 150 (307)
T 1ydo_A 85 RGLENALEGGINEACVFMSASETHNRKNINK---STSESLHILKQVNNDAQKAN--LTTRAYLSTVFGCPY--------- 150 (307)
T ss_dssp HHHHHHHHHTCSEEEEEEESSHHHHHTTTCS---CHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTT---------
T ss_pred HhHHHHHhCCcCEEEEEeecCHHHHHHHhCC---CHHHHHHHHHHHHHHHHHCC--CEEEEEEEEEecCCc---------
Confidence 34777888999999999854321 0011110 1111 2345667777764 444444443 554
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC
Q 014237 234 REDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD 270 (428)
Q Consensus 234 ~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD 270 (428)
+|..+ .+.+.+.+-...++|||.|.-.|+.=
T Consensus 151 --~~~~~----~~~~~~~~~~~~~~Ga~~i~l~DT~G 181 (307)
T 1ydo_A 151 --EKDVP----IEQVIRLSEALFEFGISELSLGDTIG 181 (307)
T ss_dssp --TBCCC----HHHHHHHHHHHHHHTCSCEEEECSSC
T ss_pred --CCCCC----HHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 13332 33455555556688999999988754
No 462
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=28.98 E-value=2.3e+02 Score=28.69 Aligned_cols=110 Identities=18% Similarity=0.213 Sum_probs=70.1
Q ss_pred hHHHHHHHHH-----HcCCCeEEEeecCCC----CCCCcccCcCcCCCCC---HHHHHHHHHHHCCCeEEEeeecccCCC
Q 014237 158 GLVQEVAKAR-----DVGVNSVVLFPKVPD----ALKSPTGDEAYNDNGL---VPRTIWLLKDRYPDLVIYTDVALDPYS 225 (428)
Q Consensus 158 ~l~~~v~~~~-----~~GI~sv~LFgvi~~----~~KD~~Gs~A~~~~g~---v~rAIr~iK~~~Pdl~VitDVcLc~YT 225 (428)
.+.+.++.++ ++|+.-|+| ++ ..+|..|.--.|++-+ +..-+..|++.-=.+.|.+|.-- .|
T Consensus 37 ~i~~~ad~~~~~Gl~~~G~~~~~i----DDgW~~~~rd~~G~~~~~~~kFP~Gl~~l~~~ih~~Glk~Giw~~~g~--~t 110 (404)
T 3hg3_A 37 LFMEMAELMVSEGWKDAGYEYLCI----DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGN--KT 110 (404)
T ss_dssp HHHHHHHHHHHTTHHHHTCCEEEC----CSSCBCSSCCTTSCCCBCTTTSTTHHHHHHHHHHHTTCEEEEEEESSS--BC
T ss_pred HHHHHHHHHHHCCcHhhCCeEEEE----CCCcCCCCCCCCCCeeeChhhcCCCHHHHHHHHHHCCCeeEEEecCCc--cc
Confidence 3555666554 677777665 32 1467777755554332 34566777777767888888643 33
Q ss_pred CCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC-------CCchHHHHHHHHHHCCC
Q 014237 226 SDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM-------MDGRVGAIRAALDAEGF 285 (428)
Q Consensus 226 shGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM-------MDGRV~aIR~aLD~~Gf 285 (428)
-.||-|.+ |..+.| |-.+|+=|.|.|==-.+ +.-|..++|+||.+.|=
T Consensus 111 C~~~pGs~---~~~~~d---------a~~fa~WGvDylK~D~C~~~~~~~~~~~y~~m~~AL~~tGR 165 (404)
T 3hg3_A 111 CAGFPGSF---GYYDID---------AQTFADWGVDLLKFAGCYCDSLENLADGYKHMSLALNRTGR 165 (404)
T ss_dssp TTSSBCCT---TCHHHH---------HHHHHHHTCCEEEEECCSCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCccH---HHHHHH---------HHHHHHhCCcEEEecCcCCCcchhHHHHHHHHHHHHHhcCC
Confidence 34666654 344444 45799999998742221 44588999999999883
No 463
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=28.68 E-value=80 Score=32.21 Aligned_cols=106 Identities=12% Similarity=0.178 Sum_probs=59.7
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcc----cCcCcCCCCCHH---HHHHHHHHHCC-CeEEEeeecccCCCCCCc
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPT----GDEAYNDNGLVP---RTIWLLKDRYP-DLVIYTDVALDPYSSDGH 229 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~----Gs~A~~~~g~v~---rAIr~iK~~~P-dl~VitDVcLc~YTshGH 229 (428)
++.+.++.+.+.|+..|++++.... .-|-. +...++-.-+-+ +.|+.+++..+ ++-||.
T Consensus 284 ~i~~iA~~a~~aGaDgIiv~Ntt~~-r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg------------ 350 (415)
T 3i65_A 284 QKKEIADVLLETNIDGMIISNTTTQ-INDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIA------------ 350 (415)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCBSC-CCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE------------
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCcc-cccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEE------------
Confidence 4888888899999999999986432 11211 111111111123 56777777764 444442
Q ss_pred ceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCC--CCCCc--hH----HHHHHHHHHCCCCCce
Q 014237 230 DGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS--DMMDG--RV----GAIRAALDAEGFQHVS 289 (428)
Q Consensus 230 cGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPS--DMMDG--RV----~aIR~aLD~~Gf~~v~ 289 (428)
+|-|.+-+ .|+..-++|||.|.=- -+.+| -+ ..+++.|++.||+++.
T Consensus 351 ------~GGI~s~e-------Da~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~~~l~~~G~~si~ 405 (415)
T 3i65_A 351 ------SGGIFSGL-------DALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNLK 405 (415)
T ss_dssp ------CSSCCSHH-------HHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHTTCSSST
T ss_pred ------ECCCCCHH-------HHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 35565543 3444556899987521 11232 23 3455667788997653
No 464
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=28.64 E-value=2e+02 Score=22.16 Aligned_cols=45 Identities=13% Similarity=0.039 Sum_probs=32.5
Q ss_pred CChHHHHHHHHhchhcCCceEEec---CCCchHHHHHHHHhhCC-CCeEEEE
Q 014237 326 ANYREALVEAQADESEGADILLVK---PGLPYLDVIRLLRDKYP-LPIAAYQ 373 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVK---Pal~YLDII~~vk~~~~-lPvaaYq 373 (428)
.+..||+..... +..|+|++= |++.-+++++.+++..+ .|+....
T Consensus 42 ~~~~~al~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s 90 (143)
T 2qv0_A 42 DDGLDVLKFLQH---NKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFIT 90 (143)
T ss_dssp SCHHHHHHHHHH---CCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEE
T ss_pred CCHHHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEe
Confidence 467777776653 458999987 66677899999998775 4466553
No 465
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=28.46 E-value=1.1e+02 Score=30.33 Aligned_cols=33 Identities=9% Similarity=0.015 Sum_probs=25.9
Q ss_pred hhcCCceEEecCCC-------chHHHHHHHHhhCCCCeEE
Q 014237 339 ESEGADILLVKPGL-------PYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 339 i~EGADilMVKPal-------~YLDII~~vk~~~~lPvaa 371 (428)
.+.|+|+|-|=.+. ..++.++++|+.+++||++
T Consensus 265 e~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~ 304 (377)
T 2r14_A 265 DRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIY 304 (377)
T ss_dssp HHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEE
T ss_pred HHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEE
Confidence 35799999884321 2588999999999999886
No 466
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=28.38 E-value=1e+02 Score=28.66 Aligned_cols=91 Identities=15% Similarity=0.154 Sum_probs=58.0
Q ss_pred HHHHHHHHHCCC--eEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCC--------
Q 014237 201 RTIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMD-------- 270 (428)
Q Consensus 201 rAIr~iK~~~Pd--l~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMD-------- 270 (428)
.-.+.|++..|+ ++-++|....||-. -..++-.+.+.+.+-.+.++|||.|.=..=-+
T Consensus 26 tv~~~i~~~~P~~~~iy~~D~~~~Pyg~------------~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~~~l~~l 93 (273)
T 2oho_A 26 TVVCELIRQLPHEKIVYIGDSARAPYGP------------RPKKQIKEYTWELVNFLLTQNVKMIVFACNTATAVAWEEV 93 (273)
T ss_dssp HHHHHHHHHCTTCCEEEEECGGGCCCTT------------SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEeCCCCCCCCC------------CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchHhHHHHHHH
Confidence 377888888984 67779999889822 12344455566666666778999775322211
Q ss_pred ---------c-hHHHHHHHHHHCCCCCceeechhhhhcccccc
Q 014237 271 ---------G-RVGAIRAALDAEGFQHVSIMSYTAKYASSFYG 303 (428)
Q Consensus 271 ---------G-RV~aIR~aLD~~Gf~~v~IMSYsaKyASafYG 303 (428)
| -..+++.++...+..+++||+=..--.|.+|-
T Consensus 94 r~~~~iPvigi~epa~~~A~~~~~~~rIgVlaT~~T~~~~~y~ 136 (273)
T 2oho_A 94 KAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYR 136 (273)
T ss_dssp HHHCSSCEEESHHHHHHHHHHHCSSSEEEEEECHHHHHHTHHH
T ss_pred HHhCCCCEEeccHHHHHHHHHhcCCCeEEEEECchhhcchHHH
Confidence 2 23446666666666789998765555666663
No 467
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides}
Probab=28.29 E-value=4.2e+02 Score=25.75 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=23.7
Q ss_pred CCceeechhhhHHHHHHHHHHcCCCeEEEeecCC
Q 014237 148 PGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVP 181 (428)
Q Consensus 148 PGv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~ 181 (428)
+|--+|... .+-+.++.+.+.|++-++.++..|
T Consensus 76 ~g~~~y~~~-~~D~~~d~~~~~G~~p~~~l~~~P 108 (500)
T 4ekj_A 76 DGKIVYDWT-KIDQLYDALLAKGIKPFIELGFTP 108 (500)
T ss_dssp TTEEEECCH-HHHHHHHHHHHTTCEEEEEECCBC
T ss_pred CCCeecchH-HHHHHHHHHHHCCCEEEEEEeCCc
Confidence 444455553 366778888999999998887654
No 468
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=28.20 E-value=1.9e+02 Score=28.54 Aligned_cols=71 Identities=17% Similarity=0.162 Sum_probs=46.9
Q ss_pred hHHHHHHHHhchhcCCceEEe------cCCCchH-------HHHHHHHhh-------CCCCeEEEEechHHHHHHHHHHC
Q 014237 328 YREALVEAQADESEGADILLV------KPGLPYL-------DVIRLLRDK-------YPLPIAAYQVSGEYSMIKAGGAL 387 (428)
Q Consensus 328 ~~EAlrE~~lDi~EGADilMV------KPal~YL-------DII~~vk~~-------~~lPvaaYqVSGEYaMIkaAa~~ 387 (428)
.-|-+.++..-++++||+|-+ +|++..| +|++.+++. .++||.+= ++ -
T Consensus 162 ~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vK-i~-----------p 229 (367)
T 3zwt_A 162 AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVK-IA-----------P 229 (367)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEE-EC-----------S
T ss_pred CHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEE-eC-----------C
Confidence 334455565666778998876 4555443 677777653 67898764 32 2
Q ss_pred CCCchhhHHHHHHHHHHHhcccEee
Q 014237 388 KMIDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 388 G~iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
+| |.+ -+.|....+.++|||.|+
T Consensus 230 ~~-~~~-~~~~ia~~~~~aGadgi~ 252 (367)
T 3zwt_A 230 DL-TSQ-DKEDIASVVKELGIDGLI 252 (367)
T ss_dssp CC-CHH-HHHHHHHHHHHHTCCEEE
T ss_pred CC-CHH-HHHHHHHHHHHcCCCEEE
Confidence 33 332 357888888999999887
No 469
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=28.11 E-value=1.5e+02 Score=28.43 Aligned_cols=65 Identities=18% Similarity=0.357 Sum_probs=47.8
Q ss_pred hhcCCceEEecCCCch----------------------------HHHHHHHHhhCCCCeEEEEech-HHHHHHHHHHCCC
Q 014237 339 ESEGADILLVKPGLPY----------------------------LDVIRLLRDKYPLPIAAYQVSG-EYSMIKAGGALKM 389 (428)
Q Consensus 339 i~EGADilMVKPal~Y----------------------------LDII~~vk~~~~lPvaaYqVSG-EYaMIkaAa~~G~ 389 (428)
.+.|.|.|=+..+--| ++||+.+|+..+.||+. -+|. +|. ..||
T Consensus 154 ~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~v-ris~~~~~------~~g~ 226 (338)
T 1z41_A 154 KEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFV-RVSASDYT------DKGL 226 (338)
T ss_dssp HHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEE-EEECCCCS------TTSC
T ss_pred HHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEE-EecCcccC------CCCC
Confidence 3579999999877533 78999999999999886 4443 331 2355
Q ss_pred CchhhHHHHHHHHHHHhcccEee
Q 014237 390 IDEQRVMMESLMCLRRAGADIIL 412 (428)
Q Consensus 390 iD~~~~vlEsL~~~kRAGAd~Ii 412 (428)
+.+ -..|....+..+|+|+|-
T Consensus 227 -~~~-~~~~~a~~l~~~Gvd~i~ 247 (338)
T 1z41_A 227 -DIA-DHIGFAKWMKEQGVDLID 247 (338)
T ss_dssp -CHH-HHHHHHHHHHHTTCCEEE
T ss_pred -CHH-HHHHHHHHHHHcCCCEEE
Confidence 433 467888889999999886
No 470
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=27.81 E-value=24 Score=35.13 Aligned_cols=17 Identities=41% Similarity=0.460 Sum_probs=15.9
Q ss_pred HHHHHHHHHcCCCeecC
Q 014237 249 CKQAVSQARAGADVVSP 265 (428)
Q Consensus 249 ak~Als~A~AGADiVAP 265 (428)
..||+.-|+|||..|+|
T Consensus 165 ~~Qa~~aa~AGa~~ISP 181 (334)
T 3hjz_A 165 FCQAVTCANANITLISP 181 (334)
T ss_dssp HHHHHHHHHTTCSEECC
T ss_pred HHHHHHHHHcCCcEEEe
Confidence 57999999999999999
No 471
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=27.73 E-value=52 Score=30.29 Aligned_cols=27 Identities=19% Similarity=0.111 Sum_probs=21.6
Q ss_pred HHHHHHHhcccEeehhcHHHHHHHHhc
Q 014237 399 SLMCLRRAGADIILTYFALQAARCLCG 425 (428)
Q Consensus 399 sL~~~kRAGAd~IiTYfA~e~a~wL~~ 425 (428)
.+..+.+.|+|.|||-+-..+.++|++
T Consensus 237 ~~~~l~~~GVDgIiTD~P~~~~~~l~~ 263 (285)
T 1xx1_A 237 TTKAALDVGVDGIMTNYPNVLIGVLKE 263 (285)
T ss_dssp HHHHHHHHTCSEEEESCHHHHHHHHHS
T ss_pred HHHHHHhcCCCEEEeCCHHHHHHHHhh
Confidence 344556789999999999888888864
No 472
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=27.64 E-value=1.2e+02 Score=28.63 Aligned_cols=32 Identities=13% Similarity=0.290 Sum_probs=24.4
Q ss_pred hcCCceEEe-cC------------CCchHHHHHHHHhhCCCCeEE
Q 014237 340 SEGADILLV-KP------------GLPYLDVIRLLRDKYPLPIAA 371 (428)
Q Consensus 340 ~EGADilMV-KP------------al~YLDII~~vk~~~~lPvaa 371 (428)
+.|||.|++ =| -+..+++|+++++.+++|+.+
T Consensus 39 ~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~ 83 (305)
T 2nv1_A 39 EAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMA 83 (305)
T ss_dssp HTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEE
T ss_pred HcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEe
Confidence 479999954 11 133789999999999999874
No 473
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=27.64 E-value=1.4e+02 Score=29.48 Aligned_cols=43 Identities=26% Similarity=0.383 Sum_probs=31.0
Q ss_pred HHHHHHHHhhC--CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhcH
Q 014237 355 LDVIRLLRDKY--PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFA 416 (428)
Q Consensus 355 LDII~~vk~~~--~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYfA 416 (428)
+++|+++++.+ ++||.+ .|-|..-+-+.|.| ++|||.|..|=+
T Consensus 285 ~~~v~~i~~~v~~~ipvI~---------------~GGI~s~~da~~~l----~~GAd~V~vgra 329 (367)
T 3zwt_A 285 TQTIREMYALTQGRVPIIG---------------VGGVSSGQDALEKI----RAGASLVQLYTA 329 (367)
T ss_dssp HHHHHHHHHHTTTCSCEEE---------------ESSCCSHHHHHHHH----HHTCSEEEESHH
T ss_pred HHHHHHHHHHcCCCceEEE---------------ECCCCCHHHHHHHH----HcCCCEEEECHH
Confidence 69999999999 799986 45555444555544 479999885543
No 474
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=27.58 E-value=1.3e+02 Score=27.81 Aligned_cols=140 Identities=19% Similarity=0.211 Sum_probs=81.5
Q ss_pred cCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhcccc
Q 014237 222 DPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSF 301 (428)
Q Consensus 222 c~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASaf 301 (428)
-.|-+| +++ +-.+..+.++.|+++|..+ |++-|. +--|.|...++.|.. +++.|-+-. .|
T Consensus 4 ~~~iDh---t~L---~p~~t~~~i~~l~~~a~~~---~~~aVc---v~p~~v~~~~~~l~~---~~v~v~~vi-----gF 63 (220)
T 1ub3_A 4 AAHIDH---TLL---KPTATLEEVAKAAEEALEY---GFYGLC---IPPSYVAWVRARYPH---APFRLVTVV-----GF 63 (220)
T ss_dssp GGGEEE---ECC---CTTCCHHHHHHHHHHHHHH---TCSEEE---CCGGGHHHHHHHCTT---CSSEEEEEE-----ST
T ss_pred HHhcce---ecc---CCCCCHHHHHHHHHHHHHh---CCCEEE---ECHHHHHHHHHHhCC---CCceEEEEe-----cC
Confidence 345555 344 3345788888999999877 777776 445778887777742 234332211 12
Q ss_pred ccchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCc------h---HHHHHHHHhhCC---CCe
Q 014237 302 YGPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLP------Y---LDVIRLLRDKYP---LPI 369 (428)
Q Consensus 302 YGPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~------Y---LDII~~vk~~~~---lPv 369 (428)
| +|. .+...-+-|++.=++.|||-|-+=.-.- | ++=|+.+++... +||
T Consensus 64 --P----------~G~--------~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkv 123 (220)
T 1ub3_A 64 --P----------LGY--------QEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKV 123 (220)
T ss_dssp --T----------TCC--------SCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEE
T ss_pred --C----------CCC--------CchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceE
Confidence 1 121 1334456777777889999884433222 3 334445555542 343
Q ss_pred EEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehh--cH
Q 014237 370 AAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTY--FA 416 (428)
Q Consensus 370 aaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTY--fA 416 (428)
.- +.++++.+. +...-.....+|||+|=|+ |.
T Consensus 124 Il--------------et~~l~~e~-i~~a~~ia~eaGADfVKTsTGf~ 157 (220)
T 1ub3_A 124 IL--------------ETGYFSPEE-IARLAEAAIRGGADFLKTSTGFG 157 (220)
T ss_dssp EC--------------CGGGSCHHH-HHHHHHHHHHHTCSEEECCCSSS
T ss_pred EE--------------ecCCCCHHH-HHHHHHHHHHhCCCEEEeCCCCC
Confidence 21 334456544 4555556678999999998 64
No 475
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=27.41 E-value=80 Score=32.18 Aligned_cols=60 Identities=15% Similarity=0.439 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCC------------HHHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGL------------VPRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~------------v~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
++.+.+..+.++||.+|-|=|+.+. +.....|+.-.. ..+.|+.++++ .|-||-|+-+-+
T Consensus 32 gi~~~ldyl~~LGv~~I~l~Pi~~~----~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~--Gi~VilD~V~NH 103 (558)
T 1uok_A 32 GIISKLDYLKELGIDVIWLSPVYES----PNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHER--NMKLMMDLVVNH 103 (558)
T ss_dssp HHHTTHHHHHHHTCCEEEECCCEEC----CCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHHHHHHHHcCCCEEEECCcccC----CCCCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEeccc
Confidence 5778889999999999999886432 122234444322 23455555554 799999998754
No 476
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=27.10 E-value=1.1e+02 Score=30.25 Aligned_cols=183 Identities=11% Similarity=0.030 Sum_probs=97.8
Q ss_pred hHHHHHHHHH-HcCCCeEEEeecC---------CC--CC-CCcccC-cCcCCCCCHHHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKAR-DVGVNSVVLFPKV---------PD--AL-KSPTGD-EAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~-~~GI~sv~LFgvi---------~~--~~-KD~~Gs-~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
...+.++.+. +.|...|-|-+-= |. .. .|+.|- .--|.--++...++++++++++-.|..-+....
T Consensus 175 ~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~ 254 (379)
T 3aty_A 175 LFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLN 254 (379)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECccc
Confidence 4667778888 9999999996521 21 22 566554 222222355667899999886323554444333
Q ss_pred CCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC-CCchHHHHHHHHHHCCCCCceeechhhhhccccc
Q 014237 224 YSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM-MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFY 302 (428)
Q Consensus 224 YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM-MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafY 302 (428)
+....|. | .+++...+.+-...++|+|.|.-|.- +++ .++ +. . .
T Consensus 255 ~~~~~~~------~-----~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-----------~~~---~~---------~-~ 299 (379)
T 3aty_A 255 GVHGMID------S-----NPEALTKHLCKKIEPLSLAYLHYLRGDMVN-----------QQI---GD---------V-V 299 (379)
T ss_dssp CGGGCCC------S-----CHHHHHHHHHHHHGGGCCSEEEEECSCTTS-----------CCC---CC---------H-H
T ss_pred ccccCCC------C-----CCHHHHHHHHHHHHHhCCCEEEEcCCCcCC-----------CCc---cH---------H-H
Confidence 2111121 1 13344455555667899999976652 111 111 00 1 1
Q ss_pred cchhhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcC-CceEEe-cCCCchHHHHHHHHhhCCCCeEEEEechHHHH
Q 014237 303 GPFREALDSNPRFGDKKTYQMNPANYREALVEAQADESEG-ADILLV-KPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSM 380 (428)
Q Consensus 303 GPFRdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EG-ADilMV-KPal~YLDII~~vk~~~~lPvaaYqVSGEYaM 380 (428)
.-+|++++ -|-.+.- .+ + .++|. .=+++| ||+||+ .|.+.-=|+.+++++. .|+..|.-+-=|.
T Consensus 300 ~~ir~~~~-iPvi~~G-~i--t---~~~a~----~~l~~g~aD~V~igR~~l~~P~l~~k~~~g--~~l~~~~~~t~y~- 365 (379)
T 3aty_A 300 AWVRGSYS-GVKISNL-RY--D---FEEAD----QQIREGKVDAVAFGAKFIANPDLVERAQQN--WPLNEPRPETYYT- 365 (379)
T ss_dssp HHHHTTCC-SCEEEES-SC--C---HHHHH----HHHHTTSCSEEEESHHHHHCTTHHHHHHHT--CCCCCCCGGGTTC-
T ss_pred HHHHHHCC-CcEEEEC-CC--C---HHHHH----HHHHcCCCeEEEecHHHHhCcHHHHHHHcC--CCCCCCCHhhccC-
Confidence 23344442 2433211 12 2 33332 224456 999998 4666666899999875 4444565444331
Q ss_pred HHHHHHCCCCch
Q 014237 381 IKAGGALKMIDE 392 (428)
Q Consensus 381 IkaAa~~G~iD~ 392 (428)
..+.|+.|.
T Consensus 366 ---~~~~gy~dy 374 (379)
T 3aty_A 366 ---RTAVGYNDY 374 (379)
T ss_dssp ---SSSTTTTCC
T ss_pred ---CCCCCccCC
Confidence 234577775
No 477
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=27.09 E-value=2.8e+02 Score=25.86 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCC--eEEEeeecccCCCCCCcceeecC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPD--LVIYTDVALDPYSSDGHDGIVRE 235 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pd--l~VitDVcLc~YTshGHcGil~~ 235 (428)
.-+.|+++ ++.|-..|-.--.+. ..|+ | ....+.+=|+.+++..++ |=||- |
T Consensus 68 ~k~~E~~~-i~~GAdEID~Vinig-~~~~--g-----~~~~v~~ei~~v~~a~~~~~lKvIl-----------------E 121 (226)
T 1vcv_A 68 SRIALVSR-LAEVADEIDVVAPIG-LVKS--R-----RWAEVRRDLISVVGAAGGRVVKVIT-----------------E 121 (226)
T ss_dssp HHHHHHHH-HTTTCSEEEEECCHH-HHHT--T-----CHHHHHHHHHHHHHHTTTSEEEEEC-----------------C
T ss_pred HHHHHHHH-HHCCCCEEEEecchh-hhcC--C-----CHHHHHHHHHHHHHHHcCCCceEEE-----------------e
Confidence 46789999 999999997732111 1222 1 114577788888887654 22333 3
Q ss_pred CCccccHHHHHHHHHHHHHHHHcCCCeecCCC-CC----------Cc-----hHHHHHHHHHHCCCCCceee
Q 014237 236 DGVIMNDETVHQLCKQAVSQARAGADVVSPSD-MM----------DG-----RVGAIRAALDAEGFQHVSIM 291 (428)
Q Consensus 236 ~g~IdND~Tl~~Lak~Als~A~AGADiVAPSD-MM----------DG-----RV~aIR~aLD~~Gf~~v~IM 291 (428)
.++. +|+-+...++.|. ++|||+|=-|- -- -| .|..+|+..++.| .+++|-
T Consensus 122 t~~L-t~eei~~a~~ia~---eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g-~~v~vK 188 (226)
T 1vcv_A 122 EPYL-RDEERYTLYDIIA---EAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKG-YRLGVK 188 (226)
T ss_dssp GGGC-CHHHHHHHHHHHH---HHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHT-CCCEEE
T ss_pred ccCC-CHHHHHHHHHHHH---HcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhC-CCceEE
Confidence 4444 3555666666664 89999999983 22 25 6777777766655 345553
No 478
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=26.93 E-value=76 Score=29.72 Aligned_cols=90 Identities=16% Similarity=0.124 Sum_probs=48.4
Q ss_pred HHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHH---HHHHHHHHHCCCeEEEeeecc---cCCCCCCcceeec
Q 014237 161 QEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVP---RTIWLLKDRYPDLVIYTDVAL---DPYSSDGHDGIVR 234 (428)
Q Consensus 161 ~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~---rAIr~iK~~~Pdl~VitDVcL---c~YTshGHcGil~ 234 (428)
+.++.+.+.|++.|.+|...++. -+.. .-..+.+..+. ++++..|+. .+-|-+.++. |||
T Consensus 83 ~~i~~a~~~G~~~V~i~~~~S~~-h~~~-~~~~~~~e~~~~~~~~v~~a~~~--G~~V~~~l~~~~~~e~---------- 148 (295)
T 1ydn_A 83 KGYEAAAAAHADEIAVFISASEG-FSKA-NINCTIAESIERLSPVIGAAIND--GLAIRGYVSCVVECPY---------- 148 (295)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHH-HHHH-HTSSCHHHHHHHHHHHHHHHHHT--TCEEEEEEECSSEETT----------
T ss_pred HHHHHHHHCCCCEEEEEEecCHH-HHHH-HcCCCHHHHHHHHHHHHHHHHHc--CCeEEEEEEEEecCCc----------
Confidence 55678889999999998642210 0000 00012223344 446666665 3555555553 343
Q ss_pred CCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC
Q 014237 235 EDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM 269 (428)
Q Consensus 235 ~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMM 269 (428)
+.-.|.+-+ .+.+-...++|||.|+-.|+.
T Consensus 149 --~~~~~~~~~---~~~~~~~~~~G~d~i~l~Dt~ 178 (295)
T 1ydn_A 149 --DGPVTPQAV---ASVTEQLFSLGCHEVSLGDTI 178 (295)
T ss_dssp --TEECCHHHH---HHHHHHHHHHTCSEEEEEETT
T ss_pred --CCCCCHHHH---HHHHHHHHhcCCCEEEecCCC
Confidence 112234444 444444557899999988753
No 479
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=26.92 E-value=2.8e+02 Score=26.86 Aligned_cols=136 Identities=17% Similarity=0.126 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHcCCCeecCC----CC-CC-chHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCCCCCCC
Q 014237 244 TVHQLCKQAVSQARAGADVVSPS----DM-MD-GRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGD 317 (428)
Q Consensus 244 Tl~~Lak~Als~A~AGADiVAPS----DM-MD-GRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sap~fgD 317 (428)
|.+.+++.|....++|.+.|==- +. -| -+|.+||+++ | .++.|+- ...
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~---G-~~~~l~v---Dan------------------- 198 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTCV---P-AGSKVMI---DPN------------------- 198 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTTS---C-TTCEEEE---ECT-------------------
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHhh---C-CCCeEEE---ECC-------------------
Confidence 45667778888888998886310 10 01 2455555443 4 3556552 111
Q ss_pred ccccCCCCCChHHHHHHHHhchhc-CCceEEecCCCc--hHHHHHHHHhhC-CCCeEEEEechHHHHHHHHHHCCCCch-
Q 014237 318 KKTYQMNPANYREALVEAQADESE-GADILLVKPGLP--YLDVIRLLRDKY-PLPIAAYQVSGEYSMIKAGGALKMIDE- 392 (428)
Q Consensus 318 RktYQmdpaN~~EAlrE~~lDi~E-GADilMVKPal~--YLDII~~vk~~~-~lPvaaYqVSGEYaMIkaAa~~G~iD~- 392 (428)
..| +..||++-+.. +++ |.++.++.=-++ .++-.+++++++ ++||++=.-- ....++.+.++|.+|-
T Consensus 199 -~~~-----~~~~a~~~~~~-l~~~g~~i~~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v 270 (389)
T 2oz8_A 199 -EAW-----TSKEALTKLVA-IREAGHDLLWVEDPILRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADIL 270 (389)
T ss_dssp -TCB-----CHHHHHHHHHH-HHHTTCCCSEEESCBCTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEE
T ss_pred -CCC-----CHHHHHHHHHH-HHhcCCCceEEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEE
Confidence 112 44677655544 443 455544432233 578899999999 9999986555 5667777888887764
Q ss_pred --hhHHHHHHHHHHH---hcccEeeh
Q 014237 393 --QRVMMESLMCLRR---AGADIILT 413 (428)
Q Consensus 393 --~~~vlEsL~~~kR---AGAd~IiT 413 (428)
+--+.|++..... .|-.+.+.
T Consensus 271 ~ikGGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 271 NVHGQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp EECSCHHHHHHHHHHHHHHTCCEEEC
T ss_pred EECcCHHHHHHHHHHHHHcCCeEeec
Confidence 2446666665544 47777776
No 480
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=26.89 E-value=3.3e+02 Score=25.51 Aligned_cols=109 Identities=18% Similarity=0.263 Sum_probs=62.0
Q ss_pred echhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCC-CeEEEeeecccCCCCCCcce
Q 014237 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDG 231 (428)
Q Consensus 153 ~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P-dl~VitDVcLc~YTshGHcG 231 (428)
+-.+ .+.+.++.+.+.|+..+.+.|. +|+...=..-=-.+.++...+... .+-||+=+
T Consensus 18 iD~~-~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv------------ 76 (289)
T 2yxg_A 18 VDFD-GLEENINFLIENGVSGIVAVGT--------TGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA------------ 76 (289)
T ss_dssp ECHH-HHHHHHHHHHHTTCSEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC------------
T ss_pred cCHH-HHHHHHHHHHHCCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC------------
Confidence 4443 5888999999999999999995 233322111112344555554432 34455422
Q ss_pred eecCCCccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeechh
Q 014237 232 IVREDGVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYT 294 (428)
Q Consensus 232 il~~~g~IdND~Tl~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYs 294 (428)
|...-.+|++ +++ ..+++|||-| .|.= --+|-+...|+..++. +++||=|-
T Consensus 77 -----g~~~t~~ai~-la~---~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~---~lPiilYn 133 (289)
T 2yxg_A 77 -----GSNCTEEAIE-LSV---FAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESI---NLPIVLYN 133 (289)
T ss_dssp -----CCSSHHHHHH-HHH---HHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred -----CCCCHHHHHH-HHH---HHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 1112244443 333 3467899964 4432 1267777777777665 57888774
No 481
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=26.87 E-value=77 Score=29.13 Aligned_cols=163 Identities=23% Similarity=0.318 Sum_probs=91.4
Q ss_pred hHHHHHHHHHHcCCCeEEE--e-e-cCCCCCCCcccCcCcCCCCCHHHHHHHHHHHC-CCeEEEeeecccCCCCCCccee
Q 014237 158 GLVQEVAKARDVGVNSVVL--F-P-KVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGI 232 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~L--F-g-vi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~-Pdl~VitDVcLc~YTshGHcGi 232 (428)
.|.++++.+.+.|+..+-+ - | -||+- .+=+..++.||+.+ |++.+ ||.|=..
T Consensus 18 ~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~-------------~~G~~~v~~ir~~~~~~~~~--dvhLmv~-------- 74 (228)
T 3ovp_A 18 NLGAECLRMLDSGADYLHLDVMDGHFVPNI-------------TFGHPVVESLRKQLGQDPFF--DMHMMVS-------- 74 (228)
T ss_dssp GHHHHHHHHHHTTCSCEEEEEEBSSSSSCB-------------CBCHHHHHHHHHHHCSSSCE--EEEEECS--------
T ss_pred hHHHHHHHHHHcCCCEEEEEecCCCcCccc-------------ccCHHHHHHHHHhhCCCCcE--EEEEEeC--------
Confidence 3889999999999986544 0 0 02320 12245888888887 88765 4433111
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhcCC
Q 014237 233 VREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSN 312 (428)
Q Consensus 233 l~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~Sa 312 (428)
+ - +...+ .++++|||+|.--.--.-.+...-+.+.+.|. +++|
T Consensus 75 -~-------p---~~~i~---~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~-k~gv---------------------- 117 (228)
T 3ovp_A 75 -K-------P---EQWVK---PMAVAGANQYTFHLEATENPGALIKDIRENGM-KVGL---------------------- 117 (228)
T ss_dssp -C-------G---GGGHH---HHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTC-EEEE----------------------
T ss_pred -C-------H---HHHHH---HHHHcCCCEEEEccCCchhHHHHHHHHHHcCC-CEEE----------------------
Confidence 1 0 11222 35789999985432111123333334445564 2211
Q ss_pred CCCCCccccCCCCCChHHHHHHHHhchhcCCceEEe---cCCC-------chHHHHHHHHhhC-CCCeEEEEechHHHHH
Q 014237 313 PRFGDKKTYQMNPANYREALVEAQADESEGADILLV---KPGL-------PYLDVIRLLRDKY-PLPIAAYQVSGEYSMI 381 (428)
Q Consensus 313 p~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMV---KPal-------~YLDII~~vk~~~-~lPvaaYqVSGEYaMI 381 (428)
-++|....|.+. .+.+..|+|++ -||. .-|+-|+++|+.. ++|+ +|
T Consensus 118 ---------al~p~t~~e~l~----~~l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I---~V------- 174 (228)
T 3ovp_A 118 ---------AIKPGTSVEYLA----PWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDI---EV------- 174 (228)
T ss_dssp ---------EECTTSCGGGTG----GGGGGCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEE---EE-------
T ss_pred ---------EEcCCCCHHHHH----HHhccCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhcCCCCE---EE-------
Confidence 122222233333 23345788764 6753 2378899999876 4555 34
Q ss_pred HHHHHCCCCchhhHHHHHHHHHHHhcccEeeh
Q 014237 382 KAGGALKMIDEQRVMMESLMCLRRAGADIILT 413 (428)
Q Consensus 382 kaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiT 413 (428)
-|-|+. |+...+.+||||+++.
T Consensus 175 -----dGGI~~-----~t~~~~~~aGAd~~Vv 196 (228)
T 3ovp_A 175 -----DGGVGP-----DTVHKCAEAGANMIVS 196 (228)
T ss_dssp -----ESSCST-----TTHHHHHHHTCCEEEE
T ss_pred -----eCCcCH-----HHHHHHHHcCCCEEEE
Confidence 455654 6777889999999875
No 482
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=26.87 E-value=62 Score=29.98 Aligned_cols=47 Identities=15% Similarity=0.364 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHcCC-CeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGV-NSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI-~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
.+...++.+.+ |. +.|.+.-.|- .+.+++.|.+.|||+-|+| .++|+
T Consensus 148 T~~~ai~~L~~-G~p~~I~~~~~va-----------------a~~gl~~l~~~~P~v~I~t-a~iD~ 195 (216)
T 1xtt_A 148 TMLKVLEEVVK-ANPKRIYIVSIIS-----------------SEYGVNKILSKYPFIYLFT-VAIDP 195 (216)
T ss_dssp HHHHHHHHHGG-GCCSEEEEECSEE-----------------EHHHHHHHHHHCTTSEEEE-SEEES
T ss_pred HHHHHHHHHHh-CCCCeEEEEEEec-----------------CHHHHHHHHHHCCCcEEEE-EEecC
Confidence 58899999999 99 6666644321 2468999999999998887 35555
No 483
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=26.85 E-value=2.5e+02 Score=26.40 Aligned_cols=103 Identities=12% Similarity=0.045 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
.+.+.++.+.+.|+..+.+.|. +|+...=..-=-.+.++...+.... |+-.-|
T Consensus 21 ~l~~lv~~li~~Gv~gl~v~Gt--------TGE~~~Ls~eEr~~v~~~~~~~~~g-------------------ViaGvg 73 (288)
T 2nuw_A 21 ALKTHAKNLLEKGIDAIFVNGT--------TGLGPALSKDEKRQNLNALYDVTHK-------------------LIFQVG 73 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEETST--------TTTGGGSCHHHHHHHHHHHTTTCSC-------------------EEEECC
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCC-------------------eEEeeC
Confidence 4888899999999999999995 2333221111123444555444333 332122
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCee---cCCCC----CCchHHHHHHHHHHCCCCCceeechh
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVV---SPSDM----MDGRVGAIRAALDAEGFQHVSIMSYT 294 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiV---APSDM----MDGRV~aIR~aLD~~Gf~~v~IMSYs 294 (428)
...-.+|++ .+-..+++|||-| .|.=- -+|-+...++..++. +++||=|-
T Consensus 74 ~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~---~lPiilYn 130 (288)
T 2nuw_A 74 SLNLNDVME----LVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARIS---SHSLYIYN 130 (288)
T ss_dssp CSCHHHHHH----HHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHC---CSCEEEEE
T ss_pred CCCHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc---CCCEEEEE
Confidence 222244433 3334467899964 44422 267777777777765 57888885
No 484
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=26.84 E-value=3.1e+02 Score=25.78 Aligned_cols=109 Identities=17% Similarity=0.218 Sum_probs=61.5
Q ss_pred echhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCC-CeEEEeeecccCCCCCCcce
Q 014237 153 LGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDG 231 (428)
Q Consensus 153 ~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P-dl~VitDVcLc~YTshGHcG 231 (428)
+-.+ .+.+.++.+.+.|+..+.+.|. +|+...=..-=-.+.++...+... .+-||+=+
T Consensus 18 iD~~-~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv------------ 76 (294)
T 2ehh_A 18 VDYE-ALGNLIEFHVDNGTDAILVCGT--------TGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT------------ 76 (294)
T ss_dssp ECHH-HHHHHHHHHHTTTCCEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC------------
T ss_pred cCHH-HHHHHHHHHHHCCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec------------
Confidence 4443 5888999999999999999995 233222111112344444444432 34455422
Q ss_pred eecCCCccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeechh
Q 014237 232 IVREDGVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYT 294 (428)
Q Consensus 232 il~~~g~IdND~Tl~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYs 294 (428)
|...-.+|++ .+-..+++|||-| .|.= --+|-+...++..++. +++||=|-
T Consensus 77 -----g~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 133 (294)
T 2ehh_A 77 -----GGNATHEAVH----LTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV---DIPIIIYN 133 (294)
T ss_dssp -----CCSCHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---CSCEEEEE
T ss_pred -----CCCCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 1112244443 3333467899965 4431 1267777777777665 57888774
No 485
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=26.82 E-value=2.1e+02 Score=25.91 Aligned_cols=86 Identities=15% Similarity=0.161 Sum_probs=48.1
Q ss_pred CCCChHHHHHHHHhchhcCCceE--Eec-----CCCch-HHHHHHHHhhCCCCeEEEEec---hHHHHHHHHHHCC--CC
Q 014237 324 NPANYREALVEAQADESEGADIL--LVK-----PGLPY-LDVIRLLRDKYPLPIAAYQVS---GEYSMIKAGGALK--MI 390 (428)
Q Consensus 324 dpaN~~EAlrE~~lDi~EGADil--MVK-----Pal~Y-LDII~~vk~~~~lPvaaYqVS---GEYaMIkaAa~~G--~i 390 (428)
|..+..|.++++. +-|||+| =++ |.+.+ +++++++|+.+++|+-+--.. +.|. +.+++.| ++
T Consensus 15 D~~~l~~~i~~~~---~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i--~~~~~aGadgv 89 (230)
T 1tqj_A 15 DFSRLGEEIKAVD---EAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYV--EDFAKAGADII 89 (230)
T ss_dssp CGGGHHHHHHHHH---HTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTH--HHHHHHTCSEE
T ss_pred CHhHHHHHHHHHH---HcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHHHHH--HHHHHcCCCEE
Confidence 4567777776664 4689984 344 33333 599999999887665543221 2242 3333333 11
Q ss_pred ---ch---hhHHHHHHHHHHHhcccEeehh
Q 014237 391 ---DE---QRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 391 ---D~---~~~vlEsL~~~kRAGAd~IiTY 414 (428)
++ .....+.+..++..|..+.++-
T Consensus 90 ~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~ 119 (230)
T 1tqj_A 90 SVHVEHNASPHLHRTLCQIRELGKKAGAVL 119 (230)
T ss_dssp EEECSTTTCTTHHHHHHHHHHTTCEEEEEE
T ss_pred EECcccccchhHHHHHHHHHHcCCcEEEEE
Confidence 22 1234566666666776666543
No 486
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=26.79 E-value=1.7e+02 Score=28.60 Aligned_cols=186 Identities=20% Similarity=0.270 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeec---------CC--CCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPK---------VP--DALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSS 226 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgv---------i~--~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTs 226 (428)
...+.++.+.+.|...|-|-+- -| +...|+.|-.--|.--++.+.++++|+++++--|.. -|.++..
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~v--rls~~~~ 239 (364)
T 1vyr_A 162 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGI--RVSPIGT 239 (364)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEE--EECCSSC
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEE--EEccccc
Confidence 3566667778999999999542 02 223566665444444466778999999996323333 3333311
Q ss_pred CCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCC-CCchHHHHHHHHHHCCCCCceeechhhhhccccccch
Q 014237 227 DGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDM-MDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPF 305 (428)
Q Consensus 227 hGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDM-MDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPF 305 (428)
|.|+- . + ..+++...+.|-...++|+|.|.=|.. +.+ +. . + .-.|..-+
T Consensus 240 --~~~~~-~-~----~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~------------~~-~-----~----~~~~~~~v 289 (364)
T 1vyr_A 240 --FQNVD-N-G----PNEEADALYLIEELAKRGIAYLHMSETDLAG------------GK-P-----Y----SEAFRQKV 289 (364)
T ss_dssp --BTTBC-C-C----TTHHHHHHHHHHHHHHTTCSEEEEECCBTTB------------CC-C-----C----CHHHHHHH
T ss_pred --ccccc-C-C----CCCHHHHHHHHHHHHHhCCCEEEEecCcccC------------CC-c-----c----cHHHHHHH
Confidence 11110 1 1 224555566666778999999986642 111 00 0 0 01123334
Q ss_pred hhhhcCCCCCCCccccCCCCCChHHHHHHHHhchhcC-CceEEe-cCCCchHHHHHHHHhhCCCCeEEEEechHHHHHHH
Q 014237 306 REALDSNPRFGDKKTYQMNPANYREALVEAQADESEG-ADILLV-KPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKA 383 (428)
Q Consensus 306 RdAa~Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EG-ADilMV-KPal~YLDII~~vk~~~~lPvaaYqVSGEYaMIka 383 (428)
|++++ -|-.+.- .+ + .++|. ++ +++| ||+||+ .|.+.-=|+++++++.. |+..|.-+==|.
T Consensus 290 ~~~~~-iPvi~~G-gi--t---~~~a~-~~---l~~g~aD~V~~gR~~l~~P~~~~~~~~g~--~l~~~~~~~~y~---- 352 (364)
T 1vyr_A 290 RERFH-GVIIGAG-AY--T---AEKAE-DL---IGKGLIDAVAFGRDYIANPDLVARLQKKA--ELNPQRPESFYG---- 352 (364)
T ss_dssp HHHCC-SEEEEES-SC--C---HHHHH-HH---HHTTSCSEEEESHHHHHCTTHHHHHHHTC--CCCCCCGGGSSS----
T ss_pred HHHCC-CCEEEEC-Cc--C---HHHHH-HH---HHCCCccEEEECHHHHhChhHHHHHHcCC--CCCCCCHHhccC----
Confidence 55542 3433211 12 2 22322 22 4456 999987 56666669999998754 444454433331
Q ss_pred HHHCCCCch
Q 014237 384 GGALKMIDE 392 (428)
Q Consensus 384 Aa~~G~iD~ 392 (428)
..++|+.|.
T Consensus 353 ~~~~gy~dy 361 (364)
T 1vyr_A 353 GGAEGYTDY 361 (364)
T ss_dssp SSSTTTTCS
T ss_pred CCCCCcCCC
Confidence 123577664
No 487
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=26.66 E-value=2.8e+02 Score=26.32 Aligned_cols=149 Identities=15% Similarity=0.182 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHC-CCeEEEeeecccCCCCCCcceeecCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRY-PDLVIYTDVALDPYSSDGHDGIVRED 236 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~-Pdl~VitDVcLc~YTshGHcGil~~~ 236 (428)
.+.+.++.+.+.|+..+.+.|. +|+...=...=-.+.++...+.. ..+-||+=|
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~Gt--------TGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv----------------- 88 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTAIVVGGT--------TGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT----------------- 88 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC-----------------
Confidence 4788899999999999999995 23332211111234444444443 234454322
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeechhhhhccccccchhhhhc
Q 014237 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALD 310 (428)
Q Consensus 237 g~IdND~Tl~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGPFRdAa~ 310 (428)
|...-.+|++ +++ ..+++|||-| .|.= --+|-+...|+..+.. +++||=|-. |-
T Consensus 89 g~~~t~~ai~-la~---~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn~--------P~----- 148 (301)
T 1xky_A 89 GSNNTHASID-LTK---KATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST---PLPVMLYNV--------PG----- 148 (301)
T ss_dssp CCSCHHHHHH-HHH---HHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC---SSCEEEEEC--------HH-----
T ss_pred CCCCHHHHHH-HHH---HHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeC--------cc-----
Confidence 1112244443 333 3467899964 4431 1266777777766644 578887742 21
Q ss_pred CCCCCCCccccCCCCCChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhhCC
Q 014237 311 SNPRFGDKKTYQMNPANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYP 366 (428)
Q Consensus 311 Sap~fgDRktYQmdpaN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~~~ 366 (428)
|..+.|+| |-+.+.. ++ --++-||=+..-++-+.++.+.++
T Consensus 149 -------~tg~~l~~----~~~~~La-~~---pnIvgiKdssgd~~~~~~~~~~~~ 189 (301)
T 1xky_A 149 -------RSIVQISV----DTVVRLS-EI---ENIVAIKDAGGDVLTMTEIIEKTA 189 (301)
T ss_dssp -------HHSSCCCH----HHHHHHH-TS---TTEEEEEECSSCHHHHHHHHHHSC
T ss_pred -------ccCCCCCH----HHHHHHH-cC---CCEEEEEcCCCCHHHHHHHHHhcC
Confidence 22233433 3344443 22 358888877665666666665543
No 488
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=26.66 E-value=1.5e+02 Score=30.26 Aligned_cols=43 Identities=23% Similarity=0.201 Sum_probs=30.6
Q ss_pred HHHHHHHHhhC--CCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehhcH
Q 014237 355 LDVIRLLRDKY--PLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFA 416 (428)
Q Consensus 355 LDII~~vk~~~--~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTYfA 416 (428)
+++|+++++.. ++||.+ .|-|..-+-+.|.| ++|||+|..|=+
T Consensus 332 l~~I~~v~~~v~~~iPIIg---------------~GGI~s~eDa~e~l----~aGAd~VqIgra 376 (415)
T 3i65_A 332 TKFICEMYNYTNKQIPIIA---------------SGGIFSGLDALEKI----EAGASVCQLYSC 376 (415)
T ss_dssp HHHHHHHHHHTTTCSCEEE---------------CSSCCSHHHHHHHH----HHTEEEEEESHH
T ss_pred HHHHHHHHHHhCCCCCEEE---------------ECCCCCHHHHHHHH----HcCCCEEEEcHH
Confidence 68999999988 699875 45555544555554 489999876544
No 489
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=26.55 E-value=23 Score=35.06 Aligned_cols=38 Identities=18% Similarity=0.349 Sum_probs=30.9
Q ss_pred CChHHHHHHHHhchhcCCceEEecCCCchHHHHHHHHhh
Q 014237 326 ANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDK 364 (428)
Q Consensus 326 aN~~EAlrE~~lDi~EGADilMVKPal~YLDII~~vk~~ 364 (428)
.+.+||+..+....++| |+|+++|+..-+|..+...++
T Consensus 388 ~~~~~a~~~~~~~~~~g-d~vL~~~a~~S~~~~~~~~~R 425 (439)
T 2x5o_A 388 ETMEQAMRLLAPRVQPG-DMVLLSPACASLDQFKNFEQR 425 (439)
T ss_dssp SSHHHHHHHHGGGCCTT-CEEEECCSSBSTTTSSSHHHH
T ss_pred CCHHHHHHHHHHhCCCC-CEEEEcchhhHhhhhhCHHHH
Confidence 58899998887766666 999999999999988765543
No 490
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=26.48 E-value=1.2e+02 Score=28.54 Aligned_cols=155 Identities=11% Similarity=0.054 Sum_probs=87.9
Q ss_pred HHHHHHHHCC--CeEEEeeecccCCCCCCcceeecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCCCch--HHHHH
Q 014237 202 TIWLLKDRYP--DLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGR--VGAIR 277 (428)
Q Consensus 202 AIr~iK~~~P--dl~VitDVcLc~YTshGHcGil~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMMDGR--V~aIR 277 (428)
..|.|++..| +++-++|..-+|| |.=+-|+-.+++.+.+-.+.++|||+|.=..=-+-. +..+|
T Consensus 22 v~~~i~~~lp~~~~iy~~D~a~~PY------------G~~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~~~al~~lr 89 (268)
T 3out_A 22 IVKNLMSILPNEDIIYFGDIARIPY------------GTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTISAIAKDIVQ 89 (268)
T ss_dssp HHHHHHHHCTTCCEEEEECTTTCCC------------TTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCcEEEecCCCCCCC------------CCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHH
Confidence 4677888888 5888999999999 222445666666677777788899987543322221 24555
Q ss_pred HHH-H-------------HCCCCCceeechhhhhccccccchhhhhc--------CCCCCCC-ccccCCCCCChHHHHHH
Q 014237 278 AAL-D-------------AEGFQHVSIMSYTAKYASSFYGPFREALD--------SNPRFGD-KKTYQMNPANYREALVE 334 (428)
Q Consensus 278 ~aL-D-------------~~Gf~~v~IMSYsaKyASafYGPFRdAa~--------Sap~fgD-RktYQmdpaN~~EAlrE 334 (428)
+.+ + ..+..+|+||+=.+--.|.||--.=...+ ..|.|-. =..-+.+-...++.+++
T Consensus 90 ~~~~~iPvigiiep~~~~~~~~~~IGVLaT~~Ti~s~~y~~~l~~~~~~~~V~~~~~~~lV~~vE~g~~~~~~~~~~l~~ 169 (268)
T 3out_A 90 EIAKAIPVIDVITAGVSLVDNLNTVGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKE 169 (268)
T ss_dssp HHHTTSCEEEHHHHHHHTTTTCSEEEEEECHHHHHHTHHHHHHHHHCTTSEEEEEECTTHHHHHHTTCCSSHHHHHHHHH
T ss_pred HhcCCCCEEeccHHHHHHhccCCeEEEEecCcccccHHHHHHHHHhCCCCEEecCCChHHHHHHHcCCcCCHHHHHHHHH
Confidence 555 1 23446789998777677777743222111 1122100 00111222234566777
Q ss_pred HHhchh-cCCceEEecCCCchHHHHHHHHhhCCCCe
Q 014237 335 AQADES-EGADILLVKPGLPYLDVIRLLRDKYPLPI 369 (428)
Q Consensus 335 ~~lDi~-EGADilMVKPal~YLDII~~vk~~~~lPv 369 (428)
....+. +|+|.|+.== .-|--+...+++..++|+
T Consensus 170 ~l~~l~~~g~D~iILGC-Th~pll~~~i~~~~~v~v 204 (268)
T 3out_A 170 YLSYFHDKNIQALILGC-THYPIIKESIAKILDVKL 204 (268)
T ss_dssp HHGGGTTSCCSEEEECS-TTGGGGHHHHHHHCCSEE
T ss_pred HHHHHHhCCCCEEEECC-CChHHHHHHHhcCCCCce
Confidence 766664 6899877632 123333444444445554
No 491
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=26.42 E-value=1.4e+02 Score=28.48 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=24.7
Q ss_pred hhcCCceEEe--------------cC------------CCchHHHHHHHHhhC-CCCeEE
Q 014237 339 ESEGADILLV--------------KP------------GLPYLDVIRLLRDKY-PLPIAA 371 (428)
Q Consensus 339 i~EGADilMV--------------KP------------al~YLDII~~vk~~~-~lPvaa 371 (428)
.+.|+|.|.| +. +.+.++.|.++++.. ++||.+
T Consensus 202 ~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia 261 (332)
T 1vcf_A 202 RDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVA 261 (332)
T ss_dssp TTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEE
T ss_pred HHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEE
Confidence 5679999988 22 346788888888887 688865
No 492
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=26.41 E-value=3e+02 Score=26.55 Aligned_cols=105 Identities=21% Similarity=0.214 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCC-CeEEEeeecccCCCCCCcceeecCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYP-DLVIYTDVALDPYSSDGHDGIVRED 236 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~P-dl~VitDVcLc~YTshGHcGil~~~ 236 (428)
.+.+.++.+++.|+..+.+.|. +|+...=..-=-.+.++...+... .+-||+=|.
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~Gt--------TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---------------- 111 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGS--------TGIYMYLTREERRRAIEAAATILRGRRTLMAGIG---------------- 111 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC----------------
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC----------------
Confidence 4888899999999999999995 233322111122345555554443 455554322
Q ss_pred CccccHHHHHHHHHHHHHHHHcCCCee---cCCC---CCCchHHHHHHHHHHCCCCCceeechh
Q 014237 237 GVIMNDETVHQLCKQAVSQARAGADVV---SPSD---MMDGRVGAIRAALDAEGFQHVSIMSYT 294 (428)
Q Consensus 237 g~IdND~Tl~~Lak~Als~A~AGADiV---APSD---MMDGRV~aIR~aLD~~Gf~~v~IMSYs 294 (428)
...-.+|++ |++. .+++|||-| .|.= --+|-+...|+..+.. +++||=|-
T Consensus 112 -~~st~eai~-la~~---A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~---~lPiilYn 167 (332)
T 2r8w_A 112 -ALRTDEAVA-LAKD---AEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGAT---ALPLAIYN 167 (332)
T ss_dssp -CSSHHHHHH-HHHH---HHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEC
T ss_pred -CCCHHHHHH-HHHH---HHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 112244443 3333 467899964 4431 1267777777777764 57888774
No 493
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=26.24 E-value=77 Score=29.71 Aligned_cols=123 Identities=16% Similarity=0.147 Sum_probs=75.7
Q ss_pred HHHHHHHHHHCCCCCceeechhhhhccccccc-----hhhhhcCCCCCCCcccc-----CCCCCChHHHHHHHHhchhcC
Q 014237 273 VGAIRAALDAEGFQHVSIMSYTAKYASSFYGP-----FREALDSNPRFGDKKTY-----QMNPANYREALVEAQADESEG 342 (428)
Q Consensus 273 V~aIR~aLD~~Gf~~v~IMSYsaKyASafYGP-----FRdAa~Sap~fgDRktY-----QmdpaN~~EAlrE~~lDi~EG 342 (428)
..+++. |...|. -.+.|++-.+|.+||+ +.+.+ ++.. .++.-+.-+|+.++.... |
T Consensus 80 ~~aa~~-L~~~g~---d~IviaCnta~~~~G~~~~~~~~~~l--------~~~~~~~~~~iPv~~~~~A~~~al~~~--g 145 (273)
T 2xed_A 80 ERCVLE-IADAAP---EVILYACLVAVMVGGPGEHHRVESAV--------AEQLATGGSQALVRSSAGALVEGLRAL--D 145 (273)
T ss_dssp HHHHHH-HHTTCC---SEEEECCHHHHHTTCTTHHHHHHHHH--------HHHHHHTTCCCEEEEHHHHHHHHHHHT--T
T ss_pred HHHHHH-HhhcCC---CEEEECCChHHHhcccchhHHHHHHH--------HHHhhccCCCCCEecHHHHHHHHHHHc--C
Confidence 455554 666664 4566788888888884 33555 2233 455557778888876443 5
Q ss_pred C-ceEEecCCCchHH-HHHHHHhhCCCCeEEEEechHHHHHHHHHHCCCCchhhHHHHHHHHHHHhcccEeehh
Q 014237 343 A-DILLVKPGLPYLD-VIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTY 414 (428)
Q Consensus 343 A-DilMVKPal~YLD-II~~vk~~~~lPvaaYqVSGEYaMIkaAa~~G~iD~~~~vlEsL~~~kRAGAd~IiTY 414 (428)
+ -+-++=|-..-+. ..++.-+...+.+....-.|.+..++. |.+|+ +.+.+....+...|||.||--
T Consensus 146 ~~rvgvltp~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~----g~~~~-~~l~~~~~~l~~~gadaIvLg 214 (273)
T 2xed_A 146 AQRVALVTPYMRPLAEKVVAYLEAEGFTISDWRALEVADNTEV----GCIPG-EQVMAAARSLDLSEVDALVIS 214 (273)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHHHTTCEEEEEEECCCCBHHHH----HTCCH-HHHHHHHHHSCCTTCSEEEEE
T ss_pred CCeEEEEcCChhhhHHHHHHHHHHCCCEEeccccCCCccchhh----cccCH-HHHHHHHHHHhhCCCCEEEEc
Confidence 4 3555534443332 444444456777776666665544443 35564 457788888888899998755
No 494
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=26.08 E-value=51 Score=31.27 Aligned_cols=90 Identities=17% Similarity=0.187 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCCCeEEEeecCCCC-CCCcccCcCcCCCCC---HHHHHHHHHHHCCCeEEEeeecc---cCCCCCCccee
Q 014237 160 VQEVAKARDVGVNSVVLFPKVPDA-LKSPTGDEAYNDNGL---VPRTIWLLKDRYPDLVIYTDVAL---DPYSSDGHDGI 232 (428)
Q Consensus 160 ~~~v~~~~~~GI~sv~LFgvi~~~-~KD~~Gs~A~~~~g~---v~rAIr~iK~~~Pdl~VitDVcL---c~YTshGHcGi 232 (428)
.+.++.+++.|++.|.+|....+. .+...+ .+.+.. +.+.++..|+.. +-|-+.++. |||.
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~---~s~ee~l~~~~~~v~~a~~~G--~~V~~~l~~~~~~e~~------- 153 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNIN---CSIKDSLERFVPVLEAARQHQ--VRVRGYISCVLGCPYD------- 153 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHS---SCHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTTT-------
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhC---CCHHHHHHHHHHHHHHHHHCC--CeEEEEEEEEeeCCcC-------
Confidence 356788899999999998643210 000000 011122 335566666653 445444442 4541
Q ss_pred ecCCCccccHHHHHHHHHHHHHHHHcCCCeecCCCCC
Q 014237 233 VREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMM 269 (428)
Q Consensus 233 l~~~g~IdND~Tl~~Lak~Als~A~AGADiVAPSDMM 269 (428)
|+.+ .+.+.+.+-...++|||.|+-.|+.
T Consensus 154 ----~~~~----~~~~~~~~~~~~~~G~d~i~l~DT~ 182 (302)
T 2ftp_A 154 ----GDVD----PRQVAWVARELQQMGCYEVSLGDTI 182 (302)
T ss_dssp ----BCCC----HHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred ----CCCC----HHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 2222 3345555555668899999999865
No 495
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=26.07 E-value=54 Score=31.12 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=25.0
Q ss_pred HHHHHHHHHhcccEeehhcHHHHHHHHhc
Q 014237 397 MESLMCLRRAGADIILTYFALQAARCLCG 425 (428)
Q Consensus 397 lEsL~~~kRAGAd~IiTYfA~e~a~wL~~ 425 (428)
-|.+..+...|+|.|||-+-..+.++|++
T Consensus 249 ~~~~~~L~~~GVDgIiTD~P~~l~~~L~~ 277 (292)
T 3mz2_A 249 AEAYRMIIRQGVDIIESDRPIEVAEAISS 277 (292)
T ss_dssp HHHHHHHHHTTCCEEEESCHHHHHHHHGG
T ss_pred HHHHHHHHHcCCCEEEeCCHHHHHHHHHH
Confidence 35677788889999999999999999975
No 496
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=25.99 E-value=89 Score=28.72 Aligned_cols=48 Identities=15% Similarity=0.255 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDP 223 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~ 223 (428)
.+...++.+.+.|.++|.+.-.|- -+.+++.|.+.+|++.|+|+. +|+
T Consensus 138 T~~~ai~~L~~~G~~~I~~~~lv~-----------------~~~g~~~l~~~~p~v~I~t~~-iD~ 185 (208)
T 1v9s_A 138 SASLALSLLKERGATGVKLMAILA-----------------APEGLERIAKDHPDTEVVVAA-IDE 185 (208)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEEE-----------------CHHHHHHHHHHCTTCEEEEEE-ECS
T ss_pred HHHHHHHHHHHcCCCEEEEEEEEe-----------------CHHHHHHHHHHCCCcEEEEEe-ecC
Confidence 588899999999999988866432 145899999999999999874 443
No 497
>1xrs_A D-lysine 5,6-aminomutase alpha subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.1.19.4
Probab=25.93 E-value=31 Score=36.24 Aligned_cols=55 Identities=33% Similarity=0.416 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCeec---------CCCCCCc--------------hHHHHHHHHHHCCCCCceeechhhhhccccccc
Q 014237 249 CKQAVSQARAGADVVS---------PSDMMDG--------------RVGAIRAALDAEGFQHVSIMSYTAKYASSFYGP 304 (428)
Q Consensus 249 ak~Als~A~AGADiVA---------PSDMMDG--------------RV~aIR~aLD~~Gf~~v~IMSYsaKyASafYGP 304 (428)
..||..-|+.|||+|| -....-| .+.+.|+|||+-| ..|+=-=.=..|+|..-+|
T Consensus 166 i~qa~aAA~~GAD~IaVIRttgQSllDyvp~GaT~eG~GGt~aTqenfR~mRkALD~v~-~evgRyI~~~nY~SGlcmP 243 (516)
T 1xrs_A 166 ITQAVAAAKQGADVIAVIRTTGQSLLDYVPYGATTEGFGGTYATQENFRLMREALDKVG-AEVGKYIRLCNYCSGLCMP 243 (516)
T ss_dssp HHHHHHHHHTTCSEEEECCCTTGGGCSSCCCSCCSCCTTSCCCCHHHHHHHHHHHHHHH-HHHTSCCEEEEECCSTTHH
T ss_pred HHHHHHHHHcCCCEEEEecccchhhhcccCCCCCCCCcCCchhhHHHHHHHHHHHHHHH-HHhCCeeeeeccccccccH
No 498
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=25.86 E-value=2.9e+02 Score=26.06 Aligned_cols=103 Identities=12% Similarity=0.034 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHHCCCeEEEeeecccCCCCCCcceeecCCC
Q 014237 158 GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDG 237 (428)
Q Consensus 158 ~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~~Pdl~VitDVcLc~YTshGHcGil~~~g 237 (428)
.+.+.++.+.+.|+..+.+.|. +|+...=..-=-.+.++...+.... ||+ .-|
T Consensus 21 ~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~eEr~~v~~~~~~~~~g--via-----------------Gvg 73 (293)
T 1w3i_A 21 KLKIHAENLIRKGIDKLFVNGT--------TGLGPSLSPEEKLENLKAVYDVTNK--IIF-----------------QVG 73 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEESST--------TTTGGGSCHHHHHHHHHHHHTTCSC--EEE-----------------ECC
T ss_pred HHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHcCC--EEE-----------------ecC
Confidence 4888999999999999999995 2332221111223556666655444 222 112
Q ss_pred ccccHHHHHHHHHHHHHHHHcCCCee---cCCCC----CCchHHHHHHHHHHCCCCCceeechh
Q 014237 238 VIMNDETVHQLCKQAVSQARAGADVV---SPSDM----MDGRVGAIRAALDAEGFQHVSIMSYT 294 (428)
Q Consensus 238 ~IdND~Tl~~Lak~Als~A~AGADiV---APSDM----MDGRV~aIR~aLD~~Gf~~v~IMSYs 294 (428)
...-++|++ .+-..+++|||-| .|.=- -+|-+...++..+.. +++||=|-
T Consensus 74 ~~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~---~lPiilYn 130 (293)
T 1w3i_A 74 GLNLDDAIR----LAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVS---PHPVYLYN 130 (293)
T ss_dssp CSCHHHHHH----HHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred CCCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhC---CCCEEEEE
Confidence 222344443 3334467899965 44321 266777777777765 57888885
No 499
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=25.82 E-value=1e+02 Score=28.75 Aligned_cols=50 Identities=18% Similarity=0.233 Sum_probs=35.7
Q ss_pred CceeechhhhHHHHHHHHHHcCCCeEEEeecCCCCCCCcccCcCcCCCCCHHHHHHHHHHH
Q 014237 149 GCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDR 209 (428)
Q Consensus 149 Gv~r~s~~~~l~~~v~~~~~~GI~sv~LFgvi~~~~KD~~Gs~A~~~~g~v~rAIr~iK~~ 209 (428)
.-|+++.+ +++++++++.+.|++.|.|.|--+ + .++ ..-+.+.++.||+.
T Consensus 80 ~~~~ls~e-ei~~~i~~~~~~g~~~i~~~gGe~-----p----~~~-~~~~~~li~~i~~~ 129 (348)
T 3iix_A 80 KRYRMTPE-EIVERARLAVQFGAKTIVLQSGED-----P----YXM-PDVISDIVKEIKKM 129 (348)
T ss_dssp CCCBCCHH-HHHHHHHHHHHTTCSEEEEEESCC-----G----GGT-THHHHHHHHHHHTT
T ss_pred CceeCCHH-HHHHHHHHHHHCCCCEEEEEeCCC-----C----Ccc-HHHHHHHHHHHHhc
Confidence 34567886 699999999999999999877311 1 121 13466788888876
No 500
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=25.78 E-value=38 Score=31.45 Aligned_cols=55 Identities=9% Similarity=0.153 Sum_probs=29.4
Q ss_pred ChHHHHHHHHhchhcCCceEEe-cCCCchHHHHHHHHhh-CCCCeEEEEechHHHHHHHH
Q 014237 327 NYREALVEAQADESEGADILLV-KPGLPYLDVIRLLRDK-YPLPIAAYQVSGEYSMIKAG 384 (428)
Q Consensus 327 N~~EAlrE~~lDi~EGADilMV-KPal~YLDII~~vk~~-~~lPvaaYqVSGEYaMIkaA 384 (428)
+....+.++. +.++|.|++ =....-.-+++.+++. .++|+....-...-.+++.+
T Consensus 186 d~~~~~~~l~---~~~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 242 (392)
T 3lkb_A 186 DNTALLKRFE---QAGVEYVVHQNVAGPVANILKDAKRLGLKMRHLGAHYTGGPDLIALA 242 (392)
T ss_dssp CCHHHHHHHH---HTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEEECGGGCSHHHHHHH
T ss_pred CHHHHHHHHH---hcCCCEEEEecCcchHHHHHHHHHHcCCCceEEEecCcccHHHHHhh
Confidence 4444455443 368999886 2222234456666653 35777655433344566654
Done!