Your job contains 1 sequence.
>014242
MTDAGLYEFEYGDCESSGLLHDENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDW
SCLLQTERKLKQANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTATHLKKIVDRSC
PFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR
MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR
LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY
SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF
ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFT
ELREFVQV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014242
(428 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090832 - symbol:SNM1 "SENSITIVE TO NITROGEN M... 1342 1.4e-146 2
UNIPROTKB|I3LAK7 - symbol:DCLRE1A "Uncharacterized protei... 879 2.7e-90 2
UNIPROTKB|F1S5H8 - symbol:DCLRE1A "Uncharacterized protei... 874 9.0e-90 2
UNIPROTKB|I3LLR2 - symbol:DCLRE1A "Uncharacterized protei... 874 9.0e-90 2
MGI|MGI:1930042 - symbol:Dclre1a "DNA cross-link repair 1... 851 3.5e-88 2
UNIPROTKB|E2QZ29 - symbol:DCLRE1A "Uncharacterized protei... 858 1.2e-87 2
RGD|1306156 - symbol:Dclre1a "DNA cross-link repair 1A" s... 846 3.1e-87 2
UNIPROTKB|E1BN11 - symbol:DCLRE1A "Uncharacterized protei... 871 3.7e-87 1
UNIPROTKB|Q5QJC4 - symbol:DCLRE1A "DNA cross-link repair ... 863 2.6e-86 1
UNIPROTKB|F1NC75 - symbol:DCLRE1A "DNA cross-link repair ... 859 6.9e-86 1
ZFIN|ZDB-GENE-050522-124 - symbol:dclre1a "DNA cross-link... 857 1.1e-85 1
UNIPROTKB|Q6PJP8 - symbol:DCLRE1A "DNA cross-link repair ... 854 2.4e-85 1
FB|FBgn0037338 - symbol:Snm1 "Snm1" species:7227 "Drosoph... 668 1.2e-65 1
TAIR|locus:2043689 - symbol:AT2G45700 species:3702 "Arabi... 652 6.0e-64 1
POMBASE|SPAC22A12.01c - symbol:pso2 "DNA 5' exonuclease (... 564 1.1e-58 2
DICTYBASE|DDB_G0277755 - symbol:dclre1 "DNA repair metall... 551 1.6e-52 1
ASPGD|ASPL0000068746 - symbol:AN10962 species:162425 "Eme... 309 4.5e-51 3
UNIPROTKB|Q5QJC3 - symbol:DCLRE1B "5' exonuclease Apollo"... 404 7.6e-44 2
UNIPROTKB|F1NF26 - symbol:DCLRE1B "5' exonuclease Apollo"... 387 4.6e-42 2
ZFIN|ZDB-GENE-061013-328 - symbol:dclre1b "DNA cross-link... 384 1.0e-41 2
UNIPROTKB|E2RLH4 - symbol:DCLRE1B "Uncharacterized protei... 327 9.2e-36 2
UNIPROTKB|A8J921 - symbol:CHLREDRAFT_176829 "Predicted pr... 275 1.7e-35 2
UNIPROTKB|E1BFI5 - symbol:DCLRE1B "Uncharacterized protei... 331 2.0e-35 2
UNIPROTKB|D2H8V8 - symbol:DCLRE1B "5' exonuclease Apollo"... 328 3.5e-35 2
UNIPROTKB|Q9H816 - symbol:DCLRE1B "5' exonuclease Apollo"... 329 9.7e-35 2
MGI|MGI:2156057 - symbol:Dclre1b "DNA cross-link repair 1... 323 1.4e-34 2
UNIPROTKB|F1SBR3 - symbol:DCLRE1B "Uncharacterized protei... 321 2.2e-34 2
RGD|1310343 - symbol:Dclre1b "DNA cross-link repair 1B" s... 318 4.1e-34 2
GENEDB_PFALCIPARUM|PF14_0711 - symbol:PF14_0711 "hypothet... 234 3.8e-30 2
UNIPROTKB|Q8IK95 - symbol:PF14_0711 "DNA repair metallo-b... 234 3.8e-30 2
TAIR|locus:2015939 - symbol:AT1G27410 "AT1G27410" species... 298 2.1e-26 1
CGD|CAL0005993 - symbol:orf19.2926 species:5476 "Candida ... 151 1.4e-24 5
SGD|S000004745 - symbol:PSO2 "Nuclease required for DNA s... 213 3.8e-21 3
WB|WBGene00045237 - symbol:mrt-1 species:6239 "Caenorhabd... 271 3.9e-21 1
RGD|708574 - symbol:Dclre1c "DNA cross-link repair 1C" sp... 224 4.1e-19 2
UNIPROTKB|Q96SD1 - symbol:DCLRE1C "Protein artemis" speci... 224 8.1e-19 2
MGI|MGI:2441769 - symbol:Dclre1c "DNA cross-link repair 1... 220 1.2e-18 2
UNIPROTKB|F1NW11 - symbol:DCLRE1C "Protein artemis" speci... 208 7.9e-18 2
UNIPROTKB|Q5QJC2 - symbol:DCLRE1C "Protein artemis" speci... 207 1.0e-17 2
UNIPROTKB|F1RW83 - symbol:DCLRE1C "Uncharacterized protei... 219 1.1e-17 2
UNIPROTKB|E2RBE9 - symbol:DCLRE1C "Uncharacterized protei... 206 6.4e-17 2
UNIPROTKB|A6QLL4 - symbol:DCLRE1C "Uncharacterized protei... 207 6.8e-17 2
TAIR|locus:505006131 - symbol:AT1G19025 "AT1G19025" speci... 203 2.4e-13 1
ZFIN|ZDB-GENE-041210-72 - symbol:dclre1c "DNA cross-link ... 158 9.9e-11 2
UNIPROTKB|Q0C1L6 - symbol:HNE_1669 "Putative uncharacteri... 129 1.7e-05 1
TIGR_CMR|ECH_0966 - symbol:ECH_0966 "metallo-beta-lactama... 120 0.00039 1
CGD|CAL0004348 - symbol:PSO2 species:5476 "Candida albica... 124 0.00053 2
UNIPROTKB|Q5A5N8 - symbol:PSO2 "Putative uncharacterized ... 124 0.00053 2
>TAIR|locus:2090832 [details] [associations]
symbol:SNM1 "SENSITIVE TO NITROGEN MUSTARD 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006281 GO:GO:0016787 eggNOG:COG1236 KO:K15340
InterPro:IPR011084 Pfam:PF07522 EMBL:X98130 EMBL:AB026648
UniGene:At.21140 UniGene:At.43974 EMBL:X97827 EMBL:AK117422
EMBL:BT005000 IPI:IPI00516333 RefSeq:NP_001030773.1
RefSeq:NP_189302.1 RefSeq:NP_850635.1 ProteinModelPortal:Q38961
SMR:Q38961 STRING:Q38961 EnsemblPlants:AT3G26680.1
EnsemblPlants:AT3G26680.2 EnsemblPlants:AT3G26680.3 GeneID:822280
KEGG:ath:AT3G26680 GeneFarm:5058 TAIR:At3g26680
HOGENOM:HOG000030842 InParanoid:Q38961 OMA:AALIHFR PhylomeDB:Q38961
ProtClustDB:CLSN2684871 Genevestigator:Q38961 GermOnline:AT3G26680
Uniprot:Q38961
Length = 484
Score = 1342 (477.5 bits), Expect = 1.4e-146, Sum P(2) = 1.4e-146
Identities = 254/363 (69%), Positives = 294/363 (80%)
Query: 66 TERKLKQANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTA-THLKKIVDRSCPFYK 124
T +K+KQ +LF WGL+ S + S KK ++ GK + R CPFYK
Sbjct: 92 TTKKMKQTDLFQSWGLQKPSPFTSPA--SNSAKKTTSALGKRRRDSSFSNDSPRPCPFYK 149
Query: 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL 184
K+PGTPFTVDAFRYG ++GCSAYFLTHFH DHY GL K WSHGPIYCS LT+RL+R+ L
Sbjct: 150 KLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLLRLSLS 209
Query: 185 VNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS 244
VNPS IHPLEL+ E+ I+G+KVTL+EANHCPGAALIHFRL DG CYLHTGDFRAS+ MQ+
Sbjct: 210 VNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRASKQMQT 269
Query: 245 YPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK 304
+PLL N RV+VLYLDTTYCNP+YKFPSKEDVL+YVVR+TK+ L+KQPKTL+VVG+YSIGK
Sbjct: 270 HPLLFNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGK 329
Query: 305 ESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLK 364
E V+LAI+KALGVKI+ANASRRR+LQSF W ++S NL T G T LHVLPMSSLK E L
Sbjct: 330 ECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKATCLHVLPMSSLKVERLD 389
Query: 365 DYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELRE 424
++LK Y QY AVLAFRPTGWTYSE +G LDLI+P SRG ITIYGVPYSEHSSFTELRE
Sbjct: 390 EHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELRE 449
Query: 425 FVQ 427
FVQ
Sbjct: 450 FVQ 452
Score = 111 (44.1 bits), Expect = 1.4e-146, Sum P(2) = 1.4e-146
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 53 FYRCGTDWSCLLQTE-------RKLKQANLFDMWGLKSNS 85
FY+ G+DWSCL++ E +K+KQ+NLF +WGL+ NS
Sbjct: 50 FYKAGSDWSCLVEDEETVSSSVKKMKQSNLFQIWGLQENS 89
>UNIPROTKB|I3LAK7 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
EMBL:CU424456 Ensembl:ENSSSCT00000023797
GeneTree:ENSGT00530000063183 GO:GO:0016787 InterPro:IPR001279
InterPro:IPR011084 Pfam:PF07522 SMART:SM00849 Uniprot:I3LAK7
Length = 956
Score = 879 (314.5 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 163/330 (49%), Positives = 232/330 (70%)
Query: 98 KKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHY 157
K+LK S+ S ++K+ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY
Sbjct: 597 KRLKKSD--SLQEGVRKLRKRTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHY 654
Query: 158 GGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGA 217
GL K ++ P+YCS +T L++ L V YIHPL ++TE V++GVKV LL+ANHCPGA
Sbjct: 655 AGLSKNFTF-PVYCSEVTGNLLKSKLHVQEQYIHPLPIDTECVVNGVKVVLLDANHCPGA 713
Query: 218 ALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLN 277
++ F L +G LHTGDFRA M+ LL +V+ LYLDTTYC+P+Y FPS+++V+
Sbjct: 714 VMVLFHLPNGHVILHTGDFRADPTMER-SLLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQ 772
Query: 278 YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPEL 337
+ + + P TLVV G YSIGKE VFLAI+ LG K+ + + L+ + PE+
Sbjct: 773 FAINTAFEAVTLNPHTLVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYNTLRCLNIPEI 832
Query: 338 SGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL 397
+ + T ++L+H+LPM + F+ L+++LK +G +Y +LAFRPTGWT+S + + D+
Sbjct: 833 NSFITTDMCNSLVHLLPMMQINFKGLQNHLKKFGGKYNQILAFRPTGWTHSNKLTSIADV 892
Query: 398 IRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ P ++GNI+IYG+PYSEHSS+ E++ FVQ
Sbjct: 893 L-PQTKGNISIYGIPYSEHSSYPEMKRFVQ 921
Score = 41 (19.5 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 77 DMWGLKSNSESEA----NCLFSPPMKKLKASNGK 106
D+W KS + ++ NC + P KA++GK
Sbjct: 10 DIWEYKSKRKPKSVHSNNCSENIPKSVEKATDGK 43
>UNIPROTKB|F1S5H8 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 GO:GO:0016787 InterPro:IPR011084
Pfam:PF07522 OMA:ECPDGLL GeneTree:ENSGT00530000063183 EMBL:CU424456
Ensembl:ENSSSCT00000011643 Uniprot:F1S5H8
Length = 1045
Score = 874 (312.7 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 161/330 (48%), Positives = 232/330 (70%)
Query: 99 KLKASNGKST-ATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHY 157
+L+ N K+ +++ K+ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY
Sbjct: 684 RLQRGNTKTPESSNAGKLRKRTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHY 743
Query: 158 GGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGA 217
GL K ++ P+YCS +T L++ L V YIHPL ++TE V++GVKV LL+ANHCPGA
Sbjct: 744 AGLSKNFTF-PVYCSEVTGNLLKSKLHVQEQYIHPLPIDTECVVNGVKVVLLDANHCPGA 802
Query: 218 ALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLN 277
++ F L +G LHTGDFRA M+ LL +V+ LYLDTTYC+P+Y FPS+++V+
Sbjct: 803 VMVLFHLPNGHVILHTGDFRADPTMER-SLLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQ 861
Query: 278 YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPEL 337
+ + + P TLVV G YSIGKE VFLAI+ LG K+ + + L+ + PE+
Sbjct: 862 FAINTAFEAVTLNPHTLVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYNTLRCLNIPEI 921
Query: 338 SGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL 397
+ + T ++L+H+LPM + F+ L+++LK +G +Y +LAFRPTGWT+S + + D+
Sbjct: 922 NSFITTDMCNSLVHLLPMMQINFKGLQNHLKKFGGKYNQILAFRPTGWTHSNKLTSIADV 981
Query: 398 IRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ P ++GNI+IYG+PYSEHSS+ E++ FVQ
Sbjct: 982 L-PQTKGNISIYGIPYSEHSSYPEMKRFVQ 1010
Score = 41 (19.5 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 77 DMWGLKSNSESEA----NCLFSPPMKKLKASNGK 106
D+W KS + ++ NC + P KA++GK
Sbjct: 9 DIWEYKSKRKPKSVHSNNCSENIPKSVEKATDGK 42
>UNIPROTKB|I3LLR2 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 GO:GO:0016787 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 EMBL:CU424456
Ensembl:ENSSSCT00000024095 Uniprot:I3LLR2
Length = 1034
Score = 874 (312.7 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 161/330 (48%), Positives = 232/330 (70%)
Query: 99 KLKASNGKST-ATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHY 157
+L+ N K+ +++ K+ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY
Sbjct: 673 RLQRGNTKTPESSNAGKLRKRTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHY 732
Query: 158 GGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGA 217
GL K ++ P+YCS +T L++ L V YIHPL ++TE V++GVKV LL+ANHCPGA
Sbjct: 733 AGLSKNFTF-PVYCSEVTGNLLKSKLHVQEQYIHPLPIDTECVVNGVKVVLLDANHCPGA 791
Query: 218 ALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLN 277
++ F L +G LHTGDFRA M+ LL +V+ LYLDTTYC+P+Y FPS+++V+
Sbjct: 792 VMVLFHLPNGHVILHTGDFRADPTMER-SLLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQ 850
Query: 278 YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPEL 337
+ + + P TLVV G YSIGKE VFLAI+ LG K+ + + L+ + PE+
Sbjct: 851 FAINTAFEAVTLNPHTLVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYNTLRCLNIPEI 910
Query: 338 SGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL 397
+ + T ++L+H+LPM + F+ L+++LK +G +Y +LAFRPTGWT+S + + D+
Sbjct: 911 NSFITTDMCNSLVHLLPMMQINFKGLQNHLKKFGGKYNQILAFRPTGWTHSNKLTSIADV 970
Query: 398 IRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ P ++GNI+IYG+PYSEHSS+ E++ FVQ
Sbjct: 971 L-PQTKGNISIYGIPYSEHSSYPEMKRFVQ 999
Score = 41 (19.5 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 77 DMWGLKSNSESEA----NCLFSPPMKKLKASNGK 106
D+W KS + ++ NC + P KA++GK
Sbjct: 10 DIWEYKSKRKPKSVHSNNCSENIPKSVEKATDGK 43
>MGI|MGI:1930042 [details] [associations]
symbol:Dclre1a "DNA cross-link repair 1A, PSO2 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR001279 SMART:SM00849 MGI:MGI:1930042
EMBL:AF241240 GO:GO:0005634 GO:GO:0051301 GO:GO:0007067
GO:GO:0016787 GO:GO:0006289 eggNOG:COG1236 HOGENOM:HOG000168450
HOVERGEN:HBG081418 OrthoDB:EOG4F4SB1 InterPro:IPR011084
Pfam:PF07522 EMBL:BC072667 EMBL:AK220214 IPI:IPI00120389
UniGene:Mm.2805 ProteinModelPortal:Q9JIC3 SMR:Q9JIC3 STRING:Q9JIC3
PhosphoSite:Q9JIC3 PRIDE:Q9JIC3 UCSC:uc008hza.1 InParanoid:Q9JIC3
NextBio:311638 Genevestigator:Q9JIC3 GermOnline:ENSMUSG00000025077
Uniprot:Q9JIC3
Length = 1026
Score = 851 (304.6 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 158/312 (50%), Positives = 217/312 (69%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
V R+CPFYK+IPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 683 VRRTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEIT 741
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
L++ L V YI L ++TE V+D VKV LL+ANHCPGA +I F+L +G LHTGD
Sbjct: 742 GNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILHTGD 801
Query: 236 FRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
FRA M+ L +V+ L+LDTTYC+P+Y FPS+++V+ + + + P+ LV
Sbjct: 802 FRADPSMER-SRLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALV 860
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V G Y IGKE VFLAI+ LG K+ + + + LQ + PE+S + T D+L+H+LPM
Sbjct: 861 VCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPM 920
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
+ F+ L+ +LK G +Y +LAFRPTGWT+S + + D+I P +RGNI+IYG+PYSE
Sbjct: 921 MQINFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADII-PQTRGNISIYGIPYSE 979
Query: 416 HSSFTELREFVQ 427
HSS+ E++ FVQ
Sbjct: 980 HSSYLEMKRFVQ 991
Score = 49 (22.3 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 62 CLLQTERKLKQANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTATHLKKIVDRSCP 121
CL +T+ ++ A + S+ N + P K+ + GK ++ + D CP
Sbjct: 65 CLAETDSQIS-AGSSQSSSCRDESQQSQN-KETTPKKQHRTRRGKQVTPKVRPVYDGYCP 122
>UNIPROTKB|E2QZ29 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005730 GO:GO:0016787 GO:GO:0006289 CTD:9937 KO:K15340
InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 InterPro:IPR008996 SUPFAM:SSF50353
EMBL:AAEX03015537 RefSeq:XP_535018.3 Ensembl:ENSCAFT00000017779
GeneID:477824 KEGG:cfa:477824 NextBio:20853244 Uniprot:E2QZ29
Length = 1049
Score = 858 (307.1 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 155/310 (50%), Positives = 219/310 (70%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 708 KTCPFYKKIPGTGFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEITGN 766
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL ++TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 767 LLKSKLHVQKQYIHPLPMDTECIVNGVKVVLLDANHCPGAVMILFYLPNGNVLLHTGDFR 826
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ L +V+ LYLDTTYC+P+Y FPS+++V+ + + + + P+ LVV
Sbjct: 827 ADPTMER-SRLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTRNPRVLVVC 885
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG ++ + + + LQ + P+L+ + T ++L+H+LPM
Sbjct: 886 GTYSIGKEKVFLAIADVLGSRVAMSQEKYKTLQCLNIPDLNSFITTDMCNSLVHLLPMMQ 945
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G ++ +LAFRPTGWT+S + N D++ P +GNI+IYG+PYSEHS
Sbjct: 946 INFKALQSHLKKCGGEFNQILAFRPTGWTHSNQLTNIRDIV-PQIKGNISIYGIPYSEHS 1004
Query: 418 SFTELREFVQ 427
S+ EL+ FVQ
Sbjct: 1005 SYLELKRFVQ 1014
Score = 37 (18.1 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 91 CLFSPPMKKLKASNGK-STAT---HLKK 114
CL SPP+ + + +G T+T H K+
Sbjct: 145 CLDSPPVSETECPDGLLCTSTIPSHFKR 172
>RGD|1306156 [details] [associations]
symbol:Dclre1a "DNA cross-link repair 1A" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006289 "nucleotide-excision
repair" evidence=IEA;ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001279 SMART:SM00849 RGD:1306156
GO:GO:0005730 GO:GO:0016787 GO:GO:0006289 CTD:9937 KO:K15340
OrthoDB:EOG4F4SB1 InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 EMBL:CH473986 IPI:IPI00363761
RefSeq:NP_001099671.1 UniGene:Rn.41244 Ensembl:ENSRNOT00000036321
GeneID:292127 KEGG:rno:292127 UCSC:RGD:1306156 NextBio:633805
Uniprot:D3Z924
Length = 1026
Score = 846 (302.9 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
Identities = 155/310 (50%), Positives = 218/310 (70%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK+IPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K ++ PIYCS +T
Sbjct: 685 RTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTR-PIYCSEITGS 743
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIH L ++TE ++DGVKV LL+ANHCPGA +I F+L +G LHTGDFR
Sbjct: 744 LLKKKLRVQEQYIHQLPMDTECIVDGVKVVLLDANHCPGATMILFQLPNGAVTLHTGDFR 803
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V+ L+LDTTYC+P+Y FPS+++ + + + + P+ L+V
Sbjct: 804 ADPSMER-SLLASRKVHTLFLDTTYCSPEYTFPSQQEAIQFAINTAFEAVTLNPRALIVC 862
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G Y IGKE VFLAI+ LG K+ + + + LQ + PE+S + T ++L+H+LPM
Sbjct: 863 GTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCNSLVHLLPMMQ 922
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+++LK G ++ +LAFRPTGWT+S + + D I P ++GNI IYG+PYSEHS
Sbjct: 923 INFKGLQNHLKKCGGKFDQILAFRPTGWTHSNNITSIAD-ITPQTKGNIAIYGIPYSEHS 981
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 982 SYLEMKRFVQ 991
Score = 45 (20.9 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 96 PMKKLKASNGKSTATHLKKIVDRSCP 121
P K+ + + GK ++ + D CP
Sbjct: 100 PKKQCRTNRGKQATPKVRPLYDGHCP 125
Score = 38 (18.4 bits), Expect = 1.7e-86, Sum P(2) = 1.7e-86
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 91 CLFSPPMKKLKASNG---KSTA-THLKK 114
CL SPP+ + +G ST +H KK
Sbjct: 146 CLDSPPISDTECPDGVLCSSTIPSHYKK 173
>UNIPROTKB|E1BN11 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006289 "nucleotide-excision repair" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005730 GO:GO:0016787 GO:GO:0006289 CTD:9937 KO:K15340
InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 EMBL:DAAA02059252 EMBL:DAAA02059253
IPI:IPI00712829 RefSeq:XP_002698556.1 RefSeq:XP_580486.2
UniGene:Bt.37962 Ensembl:ENSBTAT00000026896 GeneID:504377
KEGG:bta:504377 NextBio:20866632 Uniprot:E1BN11
Length = 1051
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 163/330 (49%), Positives = 232/330 (70%)
Query: 99 KLKASNGK-STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHY 157
+++ N K S +++ ++ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY
Sbjct: 690 RVQRENTKISESSNAGELRKRTCPFYKKIPGTGFTVDAFQYGWVEGCTAYFLTHFHSDHY 749
Query: 158 GGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGA 217
GL K ++ PIYCS +T L++ L V YIHPL +TE +++G+KV LL+ANHCPGA
Sbjct: 750 AGLSKNFTF-PIYCSKITGNLLKSKLHVQEQYIHPLPTDTECIVNGIKVILLDANHCPGA 808
Query: 218 ALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLN 277
+I F L +G LHTGDFRA M+ LL H+V+ LYLDTTYC+P+Y FPS+++V+
Sbjct: 809 VMILFCLPNGHVILHTGDFRADPSMER-SLLGCHKVHTLYLDTTYCSPEYSFPSQQEVIQ 867
Query: 278 YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPEL 337
+ + + P+ LVV G YSIGKE +FLAI+ LG K+ + + LQ F+ PE+
Sbjct: 868 FAINTAFETVTLNPRALVVCGTYSIGKEKIFLAIADVLGSKVGMSKEKYNTLQCFNIPEV 927
Query: 338 SGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL 397
S + T ++L+H+LPM + F+ L+++LK G +Y +LAFRPTGWT+S + + D+
Sbjct: 928 SSFITTDMCNSLVHLLPMMQINFKGLQNHLKKCGGKYNQILAFRPTGWTHSNKLTSLADI 987
Query: 398 IRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
I P ++GNI+IYG+PYSEHSS+ E++ FVQ
Sbjct: 988 I-PQTKGNISIYGIPYSEHSSYLEMKRFVQ 1016
>UNIPROTKB|Q5QJC4 [details] [associations]
symbol:DCLRE1A "DNA cross-link repair 1A protein"
species:9031 "Gallus gallus" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000715 "nucleotide-excision repair, DNA damage
recognition" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] InterPro:IPR001279
SMART:SM00849 GO:GO:0005654 GO:GO:0016787 Reactome:REACT_115612
eggNOG:COG1236 EMBL:AY376896 IPI:IPI00680526 RefSeq:NP_001008683.1
UniGene:Gga.22844 ProteinModelPortal:Q5QJC4 STRING:Q5QJC4
GeneID:423902 KEGG:gga:423902 CTD:9937 HOGENOM:HOG000168450
HOVERGEN:HBG081418 InParanoid:Q5QJC4 KO:K15340 OrthoDB:EOG4F4SB1
NextBio:20826302 GO:GO:0000715 InterPro:IPR011084 Pfam:PF07522
Uniprot:Q5QJC4
Length = 972
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 168/366 (45%), Positives = 238/366 (65%)
Query: 65 QTERKLKQANLFDMWGLKSNSESE---ANCLFSPPMKKLKASNGKSTATHLKKIVDRSCP 121
Q +RK + ++ D+ ++ +S + AN K K ST + + CP
Sbjct: 575 QQKRKA-EGSVEDLEAVEESSNKDGGDANVTSGGQRKWRKRFRESSTTDEGAR--KKQCP 631
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRM 181
FYKKIPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K + P+YC+ +T LV+
Sbjct: 632 FYKKIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYCGLTKNFVF-PLYCNKITGNLVKS 690
Query: 182 CLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241
L V YI+ L ++TE +++G+KV LL+ANHCPGA +I F L G LHTGDFRA
Sbjct: 691 KLRVKEQYINVLPMDTECIVNGIKVLLLDANHCPGATMILFYLPSGTAILHTGDFRADPS 750
Query: 242 MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYS 301
M+ YP L+ +++ LYLDTTYC+P+Y FPS+++V+ + V + P+TLVV G YS
Sbjct: 751 MERYPALIGQKIHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFEMVTLNPRTLVVCGTYS 810
Query: 302 IGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFE 361
IGKE VFLAI++ LG K + + + LQ + ++ + + TLLH+LPM + F+
Sbjct: 811 IGKEKVFLAIAEVLGSKASMSRDKYKTLQCLESAAVNSLITMNWDGTLLHILPMMQINFK 870
Query: 362 TLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTE 421
L+D+L + + VLAF+PTGWTYS++ + +D I+P +RGNITIYG+PYSEHSS+ E
Sbjct: 871 GLQDHLNKFSENFDQVLAFKPTGWTYSDSCLSVMD-IKPQTRGNITIYGIPYSEHSSYLE 929
Query: 422 LREFVQ 427
++ FVQ
Sbjct: 930 MKRFVQ 935
>UNIPROTKB|F1NC75 [details] [associations]
symbol:DCLRE1A "DNA cross-link repair 1A protein"
species:9031 "Gallus gallus" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0005730 GO:GO:0016787 GO:GO:0006289
IPI:IPI00680526 InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 EMBL:AADN02030915
Ensembl:ENSGALT00000033097 Uniprot:F1NC75
Length = 972
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 165/365 (45%), Positives = 241/365 (66%)
Query: 65 QTERKLKQANLFDMWGLKSNSESEANC--LFSPPMKKLKASNGKSTATHLKKIVDRSCPF 122
Q +RK + ++ D+ ++ +S + + S +K + +S+ T + + CPF
Sbjct: 575 QQKRKA-EGSVEDLEAVEESSNKDGGVANVTSGGQRKWRKRFRESSTTD-EGARKKQCPF 632
Query: 123 YKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMC 182
YKKIPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K + P+YC+ +T LV+
Sbjct: 633 YKKIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYCGLTKNFVF-PLYCNKITGNLVKSK 691
Query: 183 LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLM 242
L V YI+ L ++TE +++G+KV LL+ANHCPGA +I F L G LHTGDFRA M
Sbjct: 692 LRVKEQYINVLPMDTECIVNGIKVLLLDANHCPGATMILFYLPSGTAILHTGDFRADPSM 751
Query: 243 QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302
+ YP L+ +++ LYLDTTYC+P+Y FPS+++V+ + V + P+TLVV G YSI
Sbjct: 752 ERYPALIGQKIHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFEMVTLNPRTLVVCGTYSI 811
Query: 303 GKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFET 362
GKE VFLAI++ LG K + + + LQ + ++ + + TLLH+LPM + F+
Sbjct: 812 GKEKVFLAIAEVLGSKASMSRDKYKTLQCLESAAVNSLITMNWDGTLLHILPMMQINFKG 871
Query: 363 LKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTEL 422
L+++L + + VLAF+PTGWTYS++ + +D I+P +RGNITIYG+PYSEHSS+ E+
Sbjct: 872 LQEHLNKFSENFDQVLAFKPTGWTYSDSCLSVMD-IKPQTRGNITIYGIPYSEHSSYLEM 930
Query: 423 REFVQ 427
+ FVQ
Sbjct: 931 KRFVQ 935
>ZFIN|ZDB-GENE-050522-124 [details] [associations]
symbol:dclre1a "DNA cross-link repair 1A (PSO2
homolog, S. cerevisiae)" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001279 SMART:SM00849
ZFIN:ZDB-GENE-050522-124 GO:GO:0016787 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 EMBL:CU695011
IPI:IPI00829229 Ensembl:ENSDART00000075876 ArrayExpress:F1QNK4
Bgee:F1QNK4 Uniprot:F1QNK4
Length = 904
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 162/325 (49%), Positives = 224/325 (68%)
Query: 103 SNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK 162
+ GK+T K+ + CPFYKKIPGT F VDAF+YG ++G +AYFLTHFH DHYGGL K
Sbjct: 548 NRGKATDGDPKE--PKRCPFYKKIPGTGFAVDAFQYGVVEGVTAYFLTHFHSDHYGGL-K 604
Query: 163 RWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHF 222
+ S PIYC+ +T+ LV+ L V+ YIH L +NTE ++ GVKVTLL+ANHCPGAA++ F
Sbjct: 605 KDSAVPIYCNKVTSNLVKSKLKVDEQYIHVLPMNTECIVQGVKVTLLDANHCPGAAMLLF 664
Query: 223 RLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL 282
L DGQ LHTGDFRA M+ YP L R+ LYLDTTYC+P+Y FP++++V+ + V
Sbjct: 665 VLPDGQTVLHTGDFRADPSMERYPELQGLRIQTLYLDTTYCSPEYTFPTQQEVVTFAVNT 724
Query: 283 TKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLC 342
+ P+TLVV G YS+GKE VFLA+S+ L K+ + + + + ++ +
Sbjct: 725 AFERVTLNPRTLVVCGTYSVGKEKVFLAVSEVLSSKVCLSKDKYNTMCCLESEDIGQRIT 784
Query: 343 TQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS 402
T +HVLPM + F+ L+ +LK + +Y ++AF+PTGWT+++TVG +D I P +
Sbjct: 785 TNWQSAQVHVLPMMQINFKNLQTHLKKFSKKYDQLVAFKPTGWTFNQTVG--VDDILPQT 842
Query: 403 RGNITIYGVPYSEHSSFTELREFVQ 427
+GNI+IYG+PYSEHSSF EL+ FVQ
Sbjct: 843 QGNISIYGIPYSEHSSFLELKRFVQ 867
>UNIPROTKB|Q6PJP8 [details] [associations]
symbol:DCLRE1A "DNA cross-link repair 1A protein"
species:9606 "Homo sapiens" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001279 SMART:SM00849
EMBL:D42045 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067 EMBL:CH471066
GO:GO:0016787 GO:GO:0006289 EMBL:AL592546 eggNOG:COG1236 CTD:9937
HOGENOM:HOG000168450 HOVERGEN:HBG081418 KO:K15340 OrthoDB:EOG4F4SB1
InterPro:IPR011084 Pfam:PF07522 EMBL:AY607842 EMBL:BC013124
EMBL:BC062582 IPI:IPI00478916 RefSeq:NP_001258745.1
RefSeq:NP_055696.3 UniGene:Hs.1560 PDB:4B87 PDBsum:4B87
ProteinModelPortal:Q6PJP8 SMR:Q6PJP8 STRING:Q6PJP8
PhosphoSite:Q6PJP8 DMDM:311033461 PaxDb:Q6PJP8 PRIDE:Q6PJP8
Ensembl:ENST00000361384 Ensembl:ENST00000369305 GeneID:9937
KEGG:hsa:9937 UCSC:uc001law.2 GeneCards:GC10M115584 HGNC:HGNC:17660
HPA:HPA036907 MIM:609682 neXtProt:NX_Q6PJP8 PharmGKB:PA27174
InParanoid:Q6PJP8 OMA:ECPDGLL GenomeRNAi:9937 NextBio:37488
Bgee:Q6PJP8 CleanEx:HS_DCLRE1A Genevestigator:Q6PJP8
GermOnline:ENSG00000198924 Uniprot:Q6PJP8
Length = 1040
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 158/310 (50%), Positives = 218/310 (70%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 699 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 757
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 758 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 817
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V++LYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 818 ADPSMER-SLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 876
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 877 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 936
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 937 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 995
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 996 SYLEMKRFVQ 1005
>FB|FBgn0037338 [details] [associations]
symbol:Snm1 "Snm1" species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001279 SMART:SM00849
EMBL:AE014297 GO:GO:0016787 eggNOG:COG1236 KO:K15340
InterPro:IPR011084 Pfam:PF07522 GeneTree:ENSGT00530000063183
EMBL:AY058585 RefSeq:NP_649548.1 UniGene:Dm.13655 SMR:Q9VND2
MINT:MINT-1328399 STRING:Q9VND2 EnsemblMetazoa:FBtr0078688
GeneID:40669 KEGG:dme:Dmel_CG10018 UCSC:CG10018-RA CTD:40669
FlyBase:FBgn0037338 InParanoid:Q9VND2 OMA:QPSISTF OrthoDB:EOG47H451
GenomeRNAi:40669 NextBio:819942 Uniprot:Q9VND2
Length = 763
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 142/369 (38%), Positives = 220/369 (59%)
Query: 67 ERKLKQANLFDMWGLKSN-SESEANCLF-SPPMKKLKASN-GKST--ATHLKKIVDRSCP 121
E KL ++L D+ + ++S N + S P K S GK++ T K+ + CP
Sbjct: 207 EAKLSNSSL-DLVEISPGPNKSPTNNFYRSSPAAITKESPLGKNSKKGTVRKQRKPKPCP 265
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRM 181
YK + GT F VD F++G I+G + YFLTHFH DHY GL K++ H P+Y SP++ARLVR
Sbjct: 266 PYKVVEGTSFCVDGFQFGEIEGVTHYFLTHFHADHYIGLTKKFCH-PLYVSPISARLVRT 324
Query: 182 CLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241
+ ++ ++IH ++++ +DGV+VT LEANHCPGA + F+L G+C LHTGDFRAS
Sbjct: 325 FIKLDETHIHEIDVDQTLDVDGVQVTALEANHCPGALMFFFKLSSGECILHTGDFRASAD 384
Query: 242 MQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP--KTLVVVG 298
M+S P+ NH +++LYLDTTY N Y F + + ++ V L + L+K + L+V G
Sbjct: 385 MESLPIFWNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAVDLVRAFLEKNAAKRILIVCG 444
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSL 358
+Y IGKE ++LA++K ++++ ++R ++ +WP+L L + LHV+ M +
Sbjct: 445 SYVIGKEKIWLALAKEFTMRVWTESNRSTAVRCLNWPDLDSVLTEDRSGANLHVIAMGKI 504
Query: 359 KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSS 418
+ +L DY + +QY +L RP+GW + +P I+ G+ YSEHSS
Sbjct: 505 SYPSLVDYFTEFEDQYDMLLGIRPSGWEKNS---------KPSYGKRISTIGIEYSEHSS 555
Query: 419 FTELREFVQ 427
+ EL FV+
Sbjct: 556 YKELERFVR 564
>TAIR|locus:2043689 [details] [associations]
symbol:AT2G45700 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR001279
InterPro:IPR001660 PROSITE:PS50105 SMART:SM00454 SMART:SM00849
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016787
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 EMBL:AC003680 EMBL:AC004665
eggNOG:COG1236 KO:K15340 InterPro:IPR011084 Pfam:PF07522
HSSP:P39769 EMBL:BT005774 EMBL:BT006104 EMBL:AK228444
IPI:IPI00544610 PIR:T00883 RefSeq:NP_182094.1 UniGene:At.36606
ProteinModelPortal:O64649 SMR:O64649 PRIDE:O64649
EnsemblPlants:AT2G45700.1 GeneID:819178 KEGG:ath:AT2G45700
TAIR:At2g45700 HOGENOM:HOG000030436 InParanoid:O64649 OMA:TIIRYEV
PhylomeDB:O64649 ProtClustDB:CLSN2683367 ArrayExpress:O64649
Genevestigator:O64649 Uniprot:O64649
Length = 723
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 136/309 (44%), Positives = 195/309 (63%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
P + IPGTPF VDAF+Y + + C +FLTHFH DHY GL K +SHG IYCS +TA+LV
Sbjct: 393 PHWNCIPGTPFRVDAFKYLT-RDCCHWFLTHFHLDHYQGLTKSFSHGKIYCSLVTAKLVN 451
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
M + + + L+L + I G+ VT +ANHCPG+ +I F +G+ LHTGDFR S
Sbjct: 452 MKIGIPWERLQVLDLGQKVNISGIDVTCFDANHCPGSIMILFEPANGKAVLHTGDFRYSE 511
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
M ++ L+ ++ L LDTTYCNP+Y FP +E V+ +VV + PKTL ++G+Y
Sbjct: 512 EMSNW--LIGSHISSLILDTTYCNPQYDFPKQEAVIQFVVEAIQ-AEAFNPKTLFLIGSY 568
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCT-QGNDTLLHVLPMSSL- 358
+IGKE +FL +++ L KIY N ++ ++L+ + + T + ++ +HV+P+ +L
Sbjct: 569 TIGKERLFLEVARVLREKIYINPAKLKLLECLGFSKDDIQWFTVKEEESHIHVVPLWTLA 628
Query: 359 KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSS 418
F+ LK Y N+Y+ ++AF PTGWT +T R L +G I Y VPYSEHSS
Sbjct: 629 SFKRLKHVANRYTNRYSLIVAFSPTGWTSGKTKKKSPG--RRLQQGTIIRYEVPYSEHSS 686
Query: 419 FTELREFVQ 427
FTEL+EFVQ
Sbjct: 687 FTELKEFVQ 695
>POMBASE|SPAC22A12.01c [details] [associations]
symbol:pso2 "DNA 5' exonuclease (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003684 "damaged DNA
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001279 SMART:SM00849
PomBase:SPAC22A12.01c GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006281
eggNOG:COG1236 GO:GO:0008409 KO:K15340 InterPro:IPR011084
Pfam:PF07522 PIR:T38927 RefSeq:NP_593231.2
ProteinModelPortal:Q10264 STRING:Q10264
EnsemblFungi:SPAC22A12.01c.1 GeneID:2541503 KEGG:spo:SPAC22A12.01c
OMA:SEHSSFK OrthoDB:EOG4M68SB NextBio:20802602 Uniprot:Q10264
Length = 560
Score = 564 (203.6 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 119/291 (40%), Positives = 172/291 (59%)
Query: 113 KKIVDRSC-PFYKKIP-GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIY 170
K+I RS PFYK +P PF VDAF YG+I G AYFL+HFH DHYGGL +W HGPIY
Sbjct: 175 KQINVRSVVPFYKLMPYNIPFAVDAFAYGAIDGVEAYFLSHFHSDHYGGLTPKWKHGPIY 234
Query: 171 CSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR-LQDGQC 229
CS +T L+ + V+ Y+ L+LN + I G+ V +L+ANHCPG+A+ F LQ Q
Sbjct: 235 CSEVTGNLLINVMHVDEQYVKRLKLNQPYNIMGITVYVLDANHCPGSAMFVFETLQSNQT 294
Query: 230 --YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL 287
LH GDFRAS+ +P+L ++ +YLDTTY NPKY FP + DV+ +
Sbjct: 295 RRVLHCGDFRASKDHVMHPVLREKTIHKVYLDTTYLNPKYTFPPQADVVQACADKAISIK 354
Query: 288 KK-QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
K + LVVV YSIGKE V +AI+K+L +IY + +++ + +L L
Sbjct: 355 KSTDSRLLVVVSTYSIGKEKVAVAIAKSLSSRIYVVPRKMHIIKQLENQDLIDLLTDDPT 414
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL 397
+H++ M + +L DYL+ Y + + ++ ++ TGWT+ + + N+ L
Sbjct: 415 QASVHMVTMMGIHPNSLLDYLEQYNSSFDKIIGYKVTGWTF-QPLENRAQL 464
Score = 56 (24.8 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 402 SRGNITIYGVPYSEHSSFTELREF 425
S + + PYSEHSSF +L F
Sbjct: 489 STDKVAAFVAPYSEHSSFYDLTMF 512
>DICTYBASE|DDB_G0277755 [details] [associations]
symbol:dclre1 "DNA repair metallo-beta-lactamase
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008408 "3'-5' exonuclease activity" evidence=ISS] [GO:0006289
"nucleotide-excision repair" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;IC] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
dictyBase:DDB_G0277755 GO:GO:0005634 GenomeReviews:CM000151_GR
EMBL:AAFI02000022 GO:GO:0008408 GO:GO:0006289 eggNOG:COG1236
KO:K15340 InterPro:IPR011084 Pfam:PF07522 RefSeq:XP_642494.1
HSSP:Q9UPQ7 ProteinModelPortal:Q86KS1 EnsemblProtists:DDB0232254
GeneID:8621205 KEGG:ddi:DDB_G0277755 InParanoid:Q86KS1
Uniprot:Q86KS1
Length = 920
Score = 551 (199.0 bits), Expect = 1.6e-52, P = 1.6e-52
Identities = 131/330 (39%), Positives = 178/330 (53%)
Query: 106 KSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS 165
+ T T KKI P +K I GT F VD F+Y S + + YFLTHFH DHY G+ K WS
Sbjct: 250 RKTPTKEKKIP----PSFKVIDGTNFLVDGFQYKS-EDFTHYFLTHFHSDHYVGITKTWS 304
Query: 166 HGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHF--- 222
G IYC+ T +LV L V+ YI E N I GVKV L++NHCPG+ALI F
Sbjct: 305 FGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIP 364
Query: 223 -RLQDGQCY-----LHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
R +DG+ LHTGDFR ++ M +YPLL ++ LYLD TYC+P+Y FP + +++
Sbjct: 365 LRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEII 424
Query: 277 NYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
V + + + +TL + G Y IGKE + L I+K G ++ + + +L
Sbjct: 425 KQVASIVRK--ENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCL 482
Query: 337 LSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD 396
T T + MS L + + L N+Y V+ FRPTGWT ++
Sbjct: 483 DINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKS----- 537
Query: 397 LIRPLSRGNITIYGVPYSEHSSFTELREFV 426
I L+RG T Y V YSEHSSF ELR+ +
Sbjct: 538 -ITYLNRGPTTFYSVAYSEHSSFNELRDCI 566
>ASPGD|ASPL0000068746 [details] [associations]
symbol:AN10962 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
EMBL:BN001304 InterPro:IPR011084 Pfam:PF07522
EnsemblFungi:CADANIAT00000700 HOGENOM:HOG000166938 OMA:FCCALRI
Uniprot:C8VBT0
Length = 832
Score = 309 (113.8 bits), Expect = 4.5e-51, Sum P(3) = 4.5e-51
Identities = 64/131 (48%), Positives = 83/131 (63%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNP 187
G +VDAFRYG+++ C+AYFL+HFH DHY GL K W HGPIYCS TA LVR L V+P
Sbjct: 401 GFSISVDAFRYGAVESCNAYFLSHFHSDHYIGLSKSWRHGPIYCSRATANLVRQQLKVDP 460
Query: 188 SYIHPLELNTEHVIDG---VKVTLLEANHCPGAALIHFR--LQDG-----QCYLHTGDFR 237
++ L+ + + G V+VT++EANHCPG+A+ F + G Q LH GDFR
Sbjct: 461 KWVVDLDFEKKTEVPGTGGVQVTMIEANHCPGSAIFLFEKAVSSGASTRIQRVLHCGDFR 520
Query: 238 ASRLMQSYPLL 248
AS + LL
Sbjct: 521 ASPQHVQHALL 531
Score = 212 (79.7 bits), Expect = 4.5e-51, Sum P(3) = 4.5e-51
Identities = 50/131 (38%), Positives = 71/131 (54%)
Query: 271 SKEDVLNYVVRLT---KNCLKKQPK--TLVVVGAYSIGKESVFLAISKALGVKIYANASR 325
SK + ++ T K + +PK LVV+G YSIGKE + LAI++AL KIYA ++
Sbjct: 603 SKNPISKFMSAATAAVKPSTQPEPKGRLLVVIGTYSIGKERICLAIARALKSKIYATPAK 662
Query: 326 RRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGW 385
+RV + PELS L +H+ + ++ ETL DYL + V+ FRPTGW
Sbjct: 663 QRVCACLEDPELSALLTDDPLQAQVHMQTLFEIRAETLCDYLDSMKPHFTRVIGFRPTGW 722
Query: 386 TYSETVGNQLD 396
TY G L+
Sbjct: 723 TYRPPAGRTLE 733
Score = 103 (41.3 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 28/67 (41%), Positives = 35/67 (52%)
Query: 228 QCYLHTGDFRASRLMQSYPLL----VN--------HRVNVLYLDTTYCNPKYKFPSKEDV 275
Q LH GDFRAS + LL V+ R++ YLDTTY +PKY FP + DV
Sbjct: 511 QRVLHCGDFRASPQHVQHALLRPDVVDPKTGKRWQQRIDACYLDTTYLSPKYAFPRQSDV 570
Query: 276 LNYVVRL 282
+N L
Sbjct: 571 INACAEL 577
Score = 69 (29.3 bits), Expect = 4.5e-51, Sum P(3) = 4.5e-51
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 409 YGVPYSEHSSFTELREF 425
+GVPYSEHSSF EL F
Sbjct: 768 FGVPYSEHSSFRELTMF 784
>UNIPROTKB|Q5QJC3 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005813 "centrosome" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISS]
[GO:0008409 "5'-3' exonuclease activity" evidence=ISS] [GO:0031848
"protection from non-homologous end joining at telomere"
evidence=ISS] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=ISS] [GO:0031860
"telomeric 3' overhang formation" evidence=ISS] [GO:0031627
"telomeric loop formation" evidence=ISS] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0005813 GO:GO:0006281
GO:GO:0031848 GO:GO:0000781 GO:GO:0000075 eggNOG:COG1236
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 HOGENOM:HOG000043118
GO:GO:0031860 GO:GO:0031627 EMBL:AY376897 IPI:IPI00585177
RefSeq:NP_001026671.2 UniGene:Gga.12786 ProteinModelPortal:Q5QJC3
STRING:Q5QJC3 GeneID:428269 KEGG:gga:428269 CTD:64858
HOVERGEN:HBG081419 InParanoid:Q5QJC3 KO:K15341 OrthoDB:EOG43R3N5
NextBio:20829309 Uniprot:Q5QJC3
Length = 457
Score = 404 (147.3 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 93/260 (35%), Positives = 137/260 (52%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IPGTP VD + G +FL+H H DH GL WS P+YCSPLTARL+ L V
Sbjct: 6 IPGTPIAVDFWSVRRAGGARLFFLSHMHSDHTVGLSSTWSR-PLYCSPLTARLLHHRLKV 64
Query: 186 NPSYIHPLELNTEHVI-DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS 244
+I PLE+ H + + V VTLL+ANHCPG+ + F G L+TGDFR S MQ
Sbjct: 65 PTRWIRPLEVGQSHAVGEEVTVTLLDANHCPGSVMFLFEGAFGTI-LYTGDFRYSPAMQR 123
Query: 245 YPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK 304
P L R++ LYLD T C P PS+ +L +++ P+ VV+G YS+GK
Sbjct: 124 EPALSGRRIDRLYLDNTNCRPHGALPSRSRAALQAAQL----IRRHPQHRVVIGVYSLGK 179
Query: 305 ESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLK 364
E + + ++ G + + SR ++ + PE+ T+ +H + ++ ++++TL
Sbjct: 180 EELLVDLALEFGTWVVVSPSRLEQMRLLELPEV---FTTEEGAGRIHAVDVAEIRWDTLV 236
Query: 365 DYLKPYGNQYAAVLAFRPTG 384
+ N +A PTG
Sbjct: 237 SW-----NVLHPTIAILPTG 251
Score = 75 (31.5 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFVQ 427
RP+ + I+ +PYS+HSSF+EL EFV+
Sbjct: 252 RPVKVTHPQIHLIPYSDHSSFSELCEFVK 280
>UNIPROTKB|F1NF26 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9031 "Gallus
gallus" [GO:0000075 "cell cycle checkpoint" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0008409 "5'-3'
exonuclease activity" evidence=IEA] [GO:0031627 "telomeric loop
formation" evidence=IEA] [GO:0031848 "protection from
non-homologous end joining at telomere" evidence=IEA] [GO:0031860
"telomeric 3' overhang formation" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0005813 GO:GO:0031848 GO:GO:0000781
GO:GO:0000075 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GO:GO:0031860 GO:GO:0031627 IPI:IPI00585177
GeneTree:ENSGT00530000063183 OMA:MAIDAHH EMBL:AADN02045017
EMBL:AADN02045018 Ensembl:ENSGALT00000002953 Uniprot:F1NF26
Length = 459
Score = 387 (141.3 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 91/261 (34%), Positives = 136/261 (52%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLL 184
IPGTP VD + G +FL+H H + GL WS P+YCSPLTARL+ L
Sbjct: 6 IPGTPIAVDFWSVRRAGGARLFFLSHMHSEKTVGLSSTWSRPLPLYCSPLTARLLYHRLK 65
Query: 185 VNPSYIHPLELNTEHVI-DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQ 243
V +I PLE+ H + + V VTLL+ANHCPG+ + F G L+TGDFR S MQ
Sbjct: 66 VPTRWIRPLEVGQSHAVGEEVTVTLLDANHCPGSVMFLFEGAFGTI-LYTGDFRYSPAMQ 124
Query: 244 SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIG 303
P L R++ LYLD T C P PS+ +L +++ P+ VV+G YS+G
Sbjct: 125 REPALSGRRIDRLYLDNTNCRPHGALPSRSRAALQAAQL----IRRHPQHRVVIGVYSLG 180
Query: 304 KESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETL 363
KE + + ++ G + + SR ++ + PE+ T+ +H + ++ ++++TL
Sbjct: 181 KEELLVDLALEFGTWVVVSPSRLEQMRLLELPEV---FTTEEGAGRIHAVDVAEIRWDTL 237
Query: 364 KDYLKPYGNQYAAVLAFRPTG 384
+ N +A PTG
Sbjct: 238 VSW-----NVLHPTIAILPTG 253
Score = 75 (31.5 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFVQ 427
RP+ + I+ +PYS+HSSF+EL EFV+
Sbjct: 254 RPVKVTHPQIHLIPYSDHSSFSELCEFVK 282
>ZFIN|ZDB-GENE-061013-328 [details] [associations]
symbol:dclre1b "DNA cross-link repair 1B"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISS]
[GO:0005813 "centrosome" evidence=ISS] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISS] [GO:0031627 "telomeric loop
formation" evidence=ISS] [GO:0031848 "protection from
non-homologous end joining at telomere" evidence=ISS] [GO:0031860
"telomeric 3' overhang formation" evidence=ISS] [GO:0000075 "cell
cycle checkpoint" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] InterPro:IPR001279
SMART:SM00849 ZFIN:ZDB-GENE-061013-328 GO:GO:0005634 GO:GO:0005813
GO:GO:0006281 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
eggNOG:COG1236 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GO:GO:0031860 GO:GO:0031627 CTD:64858 KO:K15341 OrthoDB:EOG43R3N5
EMBL:CT025875 EMBL:BC124809 IPI:IPI00806625 RefSeq:NP_001070751.1
UniGene:Dr.86618 ProteinModelPortal:B0V2S2 STRING:B0V2S2
Ensembl:ENSDART00000099692 GeneID:768137 KEGG:dre:768137
GeneTree:ENSGT00530000063183 HOGENOM:HOG000204482
HOVERGEN:HBG096227 InParanoid:Q08BA3 OMA:NHINIDV NextBio:20918457
Bgee:B0V2S2 Uniprot:B0V2S2
Length = 571
Score = 384 (140.2 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 92/268 (34%), Positives = 137/268 (51%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K +P TP VD ++ +FL+H H DH GL WSH PIYCSPLTA+L+R+ L
Sbjct: 4 KVLPDTPIAVDCWQLRKCLHVRLFFLSHMHSDHTCGLSSTWSHRPIYCSPLTAKLLRLKL 63
Query: 184 LVNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+ +I PLE+ +H++ + + V L++ANHCPGA + F+ G L+TGDF
Sbjct: 64 QIKQKWIRPLEIGQDHMLMLDDLGKERLTVNLIDANHCPGAVMFLFQGYFGT-RLYTGDF 122
Query: 237 RASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
R + M P L NH ++VLYLD T C+P PS++ + K ++ P V
Sbjct: 123 RYTPSMLRVPCLQNHINIDVLYLDNTNCDPTRALPSRQQATQQI----KQIIRDHPGYAV 178
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V+G YS+GKES L + A+ K + R R L++ +L T + V+
Sbjct: 179 VIGLYSLGKES--LLVDLAMEFKTWVEVDRER-LETLRVLQLPDVFTTDSGAGRIRVVNQ 235
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPT 383
S + L + N+ + +A PT
Sbjct: 236 SMISASNLMAW-----NKLQSTIAILPT 258
Score = 78 (32.5 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 372 NQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
NQ + + A W ++ L RP+ + +Y VPYS+HSS+ EL +FV
Sbjct: 234 NQ-SMISASNLMAWNKLQSTIAILPTSRPMVSCHPNVYVVPYSDHSSYQELEDFV 287
>UNIPROTKB|E2RLH4 [details] [associations]
symbol:DCLRE1B "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001279 SMART:SM00849 GO:GO:0016787
InterPro:IPR011084 Pfam:PF07522 OMA:KYLLTPV
GeneTree:ENSGT00530000063183 EMBL:AAEX03010988 EMBL:AAEX03010989
Ensembl:ENSCAFT00000014735 Uniprot:E2RLH4
Length = 463
Score = 327 (120.2 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 74/213 (34%), Positives = 113/213 (53%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA LV L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLVHRQLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKRWIRALEVGESHVLPLDEIGRETMTVTLMDANHCPGSVMFLFEGYFGTI-LYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ +V L ++K P+ + +
Sbjct: 124 TPSMLKEPALKLGKQIHTLYLDNTNCNPARVLPSRQEAARQIVEL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
G YS+GKES+ ++ + + R ++Q
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQ 212
Score = 75 (31.5 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 385 WTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
W + L R + R + I+ +PYS+HSSF+EL+ FV
Sbjct: 245 WNQTHPTIAILPTSRKIHRSHPDIHIIPYSDHSSFSELQTFV 286
>UNIPROTKB|A8J921 [details] [associations]
symbol:CHLREDRAFT_176829 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0003910 "DNA ligase (ATP) activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005694
"chromosome" evidence=IBA] [GO:0006266 "DNA ligation" evidence=IBA]
[GO:0006273 "lagging strand elongation" evidence=IBA] [GO:0006289
"nucleotide-excision repair" evidence=IBA] InterPro:IPR012308
InterPro:IPR012309 InterPro:IPR012310 Pfam:PF01068 Pfam:PF04675
Pfam:PF04679 PROSITE:PS50160 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0003677 GO:GO:0006310 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006289 eggNOG:COG1236
KO:K15340 InterPro:IPR011084 Pfam:PF07522 GO:GO:0006273
GO:GO:0003910 Gene3D:1.10.3260.10 SUPFAM:SSF117018 EMBL:DS496145
RefSeq:XP_001698007.1 ProteinModelPortal:A8J921
EnsemblPlants:EDO99592 GeneID:5723644 KEGG:cre:CHLREDRAFT_176829
Uniprot:A8J921
Length = 1384
Score = 275 (101.9 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 57/107 (53%), Positives = 71/107 (66%)
Query: 121 PFYKKIPGT--PFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL 178
P +K IPGT TVDAFRY G AYFLTH H DHY GL + W GP+YCS LTARL
Sbjct: 36 PAHKVIPGTGGAVTVDAFRYAH-PGVKAYFLTHAHSDHYTGLSEAWCAGPVYCSELTARL 94
Query: 179 VRMCLLVNPSYIHPLELNTEHVIDG-VKVTLLEANHCPGAALIHFRL 224
V V+ +++ PL L V++G V+VTL++ANHCPGA + FR+
Sbjct: 95 VAHLTGVSTAWLRPLPLGRPVVVEGLVEVTLVDANHCPGAVQLLFRV 141
Score = 181 (68.8 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 60/199 (30%), Positives = 96/199 (48%)
Query: 230 YLHTGDFRASRLMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
YLH GD R S MQS+P L R ++LDTTYC PK+ FP++++ ++YV +
Sbjct: 190 YLHCGDMRYSPAMQSWPQLGAWRGCEGVFLDTTYCQPKHTFPTQDEAVDYVAS------Q 243
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
+T + + S + + L + A + + + D P S + G T
Sbjct: 244 IHERTGLRIHVSSTKLDVLRLLLPPEPNPDPDAGVAAAAHVFTDD-PAASP-VHVVGWGT 301
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITI 408
L P F ++ + G + V+ F PTGWTY + + S+G +++
Sbjct: 302 LGETWPYFRPNFVNMQRAAEIMGAR--CVVGFVPTGWTYEM----KRSVFSVHSKGALSV 355
Query: 409 YGVPYSEHSSFTELREFVQ 427
+ VPYSEHSS+ EL E+V+
Sbjct: 356 HLVPYSEHSSYPELLEYVK 374
>UNIPROTKB|E1BFI5 [details] [associations]
symbol:DCLRE1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031860 "telomeric 3' overhang formation" evidence=IEA]
[GO:0031848 "protection from non-homologous end joining at
telomere" evidence=IEA] [GO:0031627 "telomeric loop formation"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000075 "cell
cycle checkpoint" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005813 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 OMA:KYLLTPV
GO:GO:0031860 GO:GO:0031627 GeneTree:ENSGT00530000063183
EMBL:DAAA02007479 IPI:IPI00700462 Ensembl:ENSBTAT00000004713
Uniprot:E1BFI5
Length = 541
Score = 331 (121.6 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 81/211 (38%), Positives = 114/211 (54%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI--DGV-----KVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ D V VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDEVGRETMTVTLLDANHCPGSVMFLFEGYFGTI-LYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+E+ +V L ++K P+ + +
Sbjct: 124 TPSMLKEPALRLGKQIHTLYLDNTNCNPDLVLPSQEEAARQIVEL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRV 328
G YS+GKES+ + AL + + S RR+
Sbjct: 180 GLYSLGKESLLERL--ALEFQTWVVLSPRRL 208
Score = 76 (31.8 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 385 WTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
W + L R + R + I+ +PYS+HSS++ELR FV
Sbjct: 245 WNQTHPTIAILPTSRKIYRSHPNIHVIPYSDHSSYSELRVFV 286
>UNIPROTKB|D2H8V8 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9646
"Ailuropoda melanoleuca" [GO:0000075 "cell cycle checkpoint"
evidence=ISS] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISS]
[GO:0005813 "centrosome" evidence=ISS] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISS] [GO:0031627 "telomeric loop
formation" evidence=ISS] [GO:0031848 "protection from
non-homologous end joining at telomere" evidence=ISS] [GO:0031860
"telomeric 3' overhang formation" evidence=ISS] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0006281 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 EMBL:GL192586
HOGENOM:HOG000043118 OMA:KYLLTPV GO:GO:0031860 GO:GO:0031627
Uniprot:D2H8V8
Length = 529
Score = 328 (120.5 bits), Expect = 3.5e-35, Sum P(2) = 3.5e-35
Identities = 77/211 (36%), Positives = 114/211 (54%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA LV L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 PKEWIRALEVGESHVLPLDEIGRETMTVTLMDANHCPGSVMFLFEGYFGTI-LYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP + PS+++ +V L ++K P+ + +
Sbjct: 124 TPSMLKEPALKLGKQIHTLYLDNTNCNPAWVLPSRQEAARQIVEL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRV 328
G YS+GKES+ + AL + + S RR+
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRRL 208
Score = 76 (31.8 bits), Expect = 3.5e-35, Sum P(2) = 3.5e-35
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 385 WTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
W + L R + R + I+ +PYS+HSS++ELR FV
Sbjct: 245 WNQTHPTIAILPTSRKIHRSHPDIHIIPYSDHSSYSELRTFV 286
>UNIPROTKB|Q9H816 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000075 "cell cycle
checkpoint" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IDA] [GO:0031848
"protection from non-homologous end joining at telomere"
evidence=IMP] [GO:0031860 "telomeric 3' overhang formation"
evidence=ISS] [GO:0031627 "telomeric loop formation" evidence=ISS]
InterPro:IPR001279 SMART:SM00849 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0006281 GO:GO:0031848 EMBL:AL137856
GO:GO:0000781 GO:GO:0000075 eggNOG:COG1236 GO:GO:0008409
InterPro:IPR011084 Pfam:PF07522 HOGENOM:HOG000043118 OMA:KYLLTPV
GO:GO:0031860 GO:GO:0031627 CTD:64858 KO:K15341 OrthoDB:EOG43R3N5
EMBL:AK022872 EMBL:AK024060 EMBL:AY849379 EMBL:BC029687
IPI:IPI00010223 RefSeq:NP_073747.1 UniGene:Hs.591412 PDB:3BUA
PDB:3ZDK PDBsum:3BUA PDBsum:3ZDK ProteinModelPortal:Q9H816
SMR:Q9H816 DIP:DIP-42669N IntAct:Q9H816 MINT:MINT-3372972
STRING:Q9H816 PhosphoSite:Q9H816 DMDM:73620756 PaxDb:Q9H816
PRIDE:Q9H816 DNASU:64858 Ensembl:ENST00000369563 GeneID:64858
KEGG:hsa:64858 UCSC:uc001eeg.3 GeneCards:GC01P114447
HGNC:HGNC:17641 MIM:300240 MIM:609683 neXtProt:NX_Q9H816
PharmGKB:PA27175 HOVERGEN:HBG081420 InParanoid:Q9H816
PhylomeDB:Q9H816 EvolutionaryTrace:Q9H816 GenomeRNAi:64858
NextBio:67007 Bgee:Q9H816 CleanEx:HS_DCLRE1B Genevestigator:Q9H816
GermOnline:ENSG00000118655 Uniprot:Q9H816
Length = 532
Score = 329 (120.9 bits), Expect = 9.7e-35, Sum P(2) = 9.7e-35
Identities = 77/211 (36%), Positives = 116/211 (54%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFGTI-LYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRV 328
G YS+GKES+ + AL + + S RR+
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRRL 208
Score = 71 (30.1 bits), Expect = 9.7e-35, Sum P(2) = 9.7e-35
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 385 WTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
W + L R + + I+ +PYS+HSS++ELR FV
Sbjct: 245 WNQTHPTIAILPTSRKIHSSHPDIHVIPYSDHSSYSELRAFV 286
>MGI|MGI:2156057 [details] [associations]
symbol:Dclre1b "DNA cross-link repair 1B, PSO2 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000075 "cell cycle
checkpoint" evidence=ISO] [GO:0000723 "telomere maintenance"
evidence=ISO] [GO:0000781 "chromosome, telomeric region"
evidence=ISO;IDA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=ISA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISO;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031627 "telomeric loop formation"
evidence=IMP] [GO:0031848 "protection from non-homologous end
joining at telomere" evidence=ISO;IMP] [GO:0031860 "telomeric 3'
overhang formation" evidence=IMP] InterPro:IPR001279 SMART:SM00849
MGI:MGI:2156057 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0031848 EMBL:CU210953 GO:GO:0000781 GO:GO:0000075
GO:GO:0006289 eggNOG:COG1236 GO:GO:0008409 InterPro:IPR011084
Pfam:PF07522 OMA:KYLLTPV GO:GO:0031860 GO:GO:0031627 CTD:64858
KO:K15341 OrthoDB:EOG43R3N5 GeneTree:ENSGT00530000063183
HOVERGEN:HBG081420 EMBL:AK046571 EMBL:AK049115 EMBL:AK084347
EMBL:AK134324 EMBL:AK137495 EMBL:AK138568 EMBL:AK154124
EMBL:BC011094 EMBL:BC067017 EMBL:BC125277 IPI:IPI00226917
IPI:IPI00403798 IPI:IPI00458408 RefSeq:NP_001020483.1
RefSeq:NP_598626.2 UniGene:Mm.374850 ProteinModelPortal:Q8C7W7
SMR:Q8C7W7 STRING:Q8C7W7 PRIDE:Q8C7W7 Ensembl:ENSMUST00000029435
Ensembl:ENSMUST00000063502 Ensembl:ENSMUST00000106832
Ensembl:ENSMUST00000106834 GeneID:140917 KEGG:mmu:140917
UCSC:uc008qtl.1 UCSC:uc008qtm.1 UCSC:uc008qto.1 InParanoid:B0V3P0
NextBio:370035 Bgee:Q8C7W7 Genevestigator:Q8C7W7
GermOnline:ENSMUSG00000027845 Uniprot:Q8C7W7
Length = 541
Score = 323 (118.8 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 73/213 (34%), Positives = 115/213 (53%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQETMTVTLIDANHCPGSVMFLFEGYFGTI-LYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L++ +++ LYLD T CNP PS+++ +V+L +++ P+ + +
Sbjct: 124 TPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQL----IRQFPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
G YS+GKES+ ++ + + R ++Q
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQ 212
Score = 77 (32.2 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 14/20 (70%), Positives = 18/20 (90%)
Query: 407 TIYGVPYSEHSSFTELREFV 426
+IY VPYS+HSS++ELR FV
Sbjct: 267 SIYTVPYSDHSSYSELRAFV 286
>UNIPROTKB|F1SBR3 [details] [associations]
symbol:DCLRE1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031860 "telomeric 3' overhang formation" evidence=IEA]
[GO:0031848 "protection from non-homologous end joining at
telomere" evidence=IEA] [GO:0031627 "telomeric loop formation"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000075 "cell
cycle checkpoint" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005813 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 OMA:KYLLTPV
GO:GO:0031860 GO:GO:0031627 KO:K15341 GeneTree:ENSGT00530000063183
EMBL:CU651648 RefSeq:XP_003125885.1 UniGene:Ssc.61003
Ensembl:ENSSSCT00000007407 GeneID:100516672 KEGG:ssc:100516672
Uniprot:F1SBR3
Length = 537
Score = 321 (118.1 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 80/214 (37%), Positives = 118/214 (55%)
Query: 126 IPGTPFTVDAFRYGSIK--GCSA-YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMC 182
IP TP VD + S++ GC+ +FL+H H DH GL W P+YCSP+TA L+
Sbjct: 6 IPHTPIAVD---FWSLRRAGCARLFFLSHMHSDHTVGLSSTWCR-PVYCSPITAYLLHRH 61
Query: 183 LLVNPSYIHPLELNTEHVI--DGV-----KVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
L V+ +I LE+ H++ D V VTL++ANHCPG+ + F G L+TGD
Sbjct: 62 LQVSKQWIRALEVGESHILPLDEVGRETMTVTLIDANHCPGSVMFLFEGYFGTI-LYTGD 120
Query: 236 FRASRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTL 294
FR + M P L + ++ LYLD T CNP PS+++ +V L ++K P+
Sbjct: 121 FRFTPSMLKEPALQLGKPIHTLYLDNTNCNPALVLPSQQEAARQIVEL----IRKHPQHN 176
Query: 295 VVVGAYSIGKESVFLAISKALGVKIYANASRRRV 328
+ +G YS+GKES+ + AL + + S RR+
Sbjct: 177 IKIGLYSLGKESLLEQL--ALEFQTWVVLSPRRL 208
Score = 77 (32.2 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 385 WTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
W + L R + R + I+ +PYS+HSSF+ELR FV
Sbjct: 245 WNQTHPTIAILPTSRRIYRSHPDIHIIPYSDHSSFSELRAFV 286
>RGD|1310343 [details] [associations]
symbol:Dclre1b "DNA cross-link repair 1B" species:10116 "Rattus
norvegicus" [GO:0000075 "cell cycle checkpoint"
evidence=IEA;ISO;ISS] [GO:0000723 "telomere maintenance"
evidence=ISO;ISS] [GO:0000781 "chromosome, telomeric region"
evidence=IEA;ISO;ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA;ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA;ISO;ISS]
[GO:0031627 "telomeric loop formation" evidence=IEA;ISO;ISS]
[GO:0031848 "protection from non-homologous end joining at
telomere" evidence=IEA;ISO;ISS] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA;ISO;ISS] InterPro:IPR001279 SMART:SM00849
RGD:1310343 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006281
GO:GO:0031848 GO:GO:0000781 GO:GO:0000075 eggNOG:COG1236
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 HOGENOM:HOG000043118
GO:GO:0031860 GO:GO:0031627 CTD:64858 HOVERGEN:HBG081419 KO:K15341
OrthoDB:EOG43R3N5 EMBL:BC098939 IPI:IPI00368893
RefSeq:NP_001020858.1 UniGene:Rn.39355 STRING:Q4KLY6 GeneID:310745
KEGG:rno:310745 UCSC:RGD:1310343 InParanoid:Q4KLY6 NextBio:662540
ArrayExpress:Q4KLY6 Genevestigator:Q4KLY6 Uniprot:Q4KLY6
Length = 541
Score = 318 (117.0 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
Identities = 71/213 (33%), Positives = 114/213 (53%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEIGESHVLLLDEIGQETMTVTLIDANHCPGSVMFLFEGYFGTI-LYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ +++L +++ P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEATQQIIQL----IRQFPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
G YS+GKES+ ++ + + R ++Q
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPQRLELVQ 212
Score = 78 (32.5 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 407 TIYGVPYSEHSSFTELREFV 426
+IY +PYS+HSS++ELR FV
Sbjct: 267 SIYSIPYSDHSSYSELRAFV 286
>GENEDB_PFALCIPARUM|PF14_0711 [details] [associations]
symbol:PF14_0711 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001279 SMART:SM00849 GO:GO:0016787 EMBL:AE014187
InterPro:IPR011084 Pfam:PF07522 RefSeq:XP_001348885.1
ProteinModelPortal:Q8IK95 EnsemblProtists:PF14_0711:mRNA
GeneID:812293 KEGG:pfa:PF14_0711 EuPathDB:PlasmoDB:PF3D7_1474300
HOGENOM:HOG000282173 ProtClustDB:CLSZ2431799 Uniprot:Q8IK95
Length = 860
Score = 234 (87.4 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 48/131 (36%), Positives = 77/131 (58%)
Query: 115 IVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPL 174
IVD+ P+ KK + D + K C +FLTHFH DHY + K ++ ++CS +
Sbjct: 16 IVDKF-PYTKKRDALRISEDKEKR---KICRIFFLTHFHADHYTNINKYFNEN-VFCSQI 70
Query: 175 TARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTG 234
T +L+ + V Y+H L++N + + KV ++ANHCPG+ +I+F ++G +HTG
Sbjct: 71 TKKLLVNIIEVQDKYVHNLKINKIYYLFNFKVAFIDANHCPGSVIIYFEFKNGTKIIHTG 130
Query: 235 DFRASRLMQSY 245
DFR S + QS+
Sbjct: 131 DFRYSNI-QSF 140
Score = 174 (66.3 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 54/184 (29%), Positives = 96/184 (52%)
Query: 255 VLYLDTTYCN-PKYKFPSKEDVLNYVVRLTKN-CLKKQPKTLVVVGAYSIGKESVFLAIS 312
++ DT Y N ++ +K D+L YV K +KK KTL + G Y++GKE ++L++S
Sbjct: 592 IINSDTKYSNIHMHEKVNKLDLLTYVNEDKKGEQIKK--KTLFLFGTYNLGKEKIYLSLS 649
Query: 313 KALGVKIY-ANASRRRVLQSFDWPELSGNLCTQGN-DTLLHVLPMS-SLKFETL--KDYL 367
A +KIY N +R++++SF + + N T + +H++ ++ S F + + +L
Sbjct: 650 DACNMKIYYKNEKKRKIIESFLYNKHILNKITDNKLEAQIHIVDINYSYIFPKIDKRKFL 709
Query: 368 ----KPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELR 423
+ ++ + PTGW + R NI+I+ +PYSEHS+ EL+
Sbjct: 710 NLIDEEIEKEFDSFYYIIPTGWVKKFSF---------YERNNISIFLIPYSEHSNLDELK 760
Query: 424 EFVQ 427
FV+
Sbjct: 761 NFVK 764
Score = 56 (24.8 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 253 VNVLYLDTTYCNPKYK-FPSKEDVLNYVVRLTKNCL 287
+ +YLDTTY K F + ++NYV+ + K L
Sbjct: 472 IKTIYLDTTYALSKNNLFAPQMYLINYVIYVCKKRL 507
>UNIPROTKB|Q8IK95 [details] [associations]
symbol:PF14_0711 "DNA repair metallo-beta-lactamase
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 SMART:SM00849 GO:GO:0016787
EMBL:AE014187 InterPro:IPR011084 Pfam:PF07522 RefSeq:XP_001348885.1
ProteinModelPortal:Q8IK95 EnsemblProtists:PF14_0711:mRNA
GeneID:812293 KEGG:pfa:PF14_0711 EuPathDB:PlasmoDB:PF3D7_1474300
HOGENOM:HOG000282173 ProtClustDB:CLSZ2431799 Uniprot:Q8IK95
Length = 860
Score = 234 (87.4 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 48/131 (36%), Positives = 77/131 (58%)
Query: 115 IVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPL 174
IVD+ P+ KK + D + K C +FLTHFH DHY + K ++ ++CS +
Sbjct: 16 IVDKF-PYTKKRDALRISEDKEKR---KICRIFFLTHFHADHYTNINKYFNEN-VFCSQI 70
Query: 175 TARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTG 234
T +L+ + V Y+H L++N + + KV ++ANHCPG+ +I+F ++G +HTG
Sbjct: 71 TKKLLVNIIEVQDKYVHNLKINKIYYLFNFKVAFIDANHCPGSVIIYFEFKNGTKIIHTG 130
Query: 235 DFRASRLMQSY 245
DFR S + QS+
Sbjct: 131 DFRYSNI-QSF 140
Score = 174 (66.3 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 54/184 (29%), Positives = 96/184 (52%)
Query: 255 VLYLDTTYCN-PKYKFPSKEDVLNYVVRLTKN-CLKKQPKTLVVVGAYSIGKESVFLAIS 312
++ DT Y N ++ +K D+L YV K +KK KTL + G Y++GKE ++L++S
Sbjct: 592 IINSDTKYSNIHMHEKVNKLDLLTYVNEDKKGEQIKK--KTLFLFGTYNLGKEKIYLSLS 649
Query: 313 KALGVKIY-ANASRRRVLQSFDWPELSGNLCTQGN-DTLLHVLPMS-SLKFETL--KDYL 367
A +KIY N +R++++SF + + N T + +H++ ++ S F + + +L
Sbjct: 650 DACNMKIYYKNEKKRKIIESFLYNKHILNKITDNKLEAQIHIVDINYSYIFPKIDKRKFL 709
Query: 368 ----KPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELR 423
+ ++ + PTGW + R NI+I+ +PYSEHS+ EL+
Sbjct: 710 NLIDEEIEKEFDSFYYIIPTGWVKKFSF---------YERNNISIFLIPYSEHSNLDELK 760
Query: 424 EFVQ 427
FV+
Sbjct: 761 NFVK 764
Score = 56 (24.8 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 253 VNVLYLDTTYCNPKYK-FPSKEDVLNYVVRLTKNCL 287
+ +YLDTTY K F + ++NYV+ + K L
Sbjct: 472 IKTIYLDTTYALSKNNLFAPQMYLINYVIYVCKKRL 507
>TAIR|locus:2015939 [details] [associations]
symbol:AT1G27410 "AT1G27410" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC004557
eggNOG:COG1236 InterPro:IPR011084 Pfam:PF07522 KO:K15341
EMBL:AY065116 EMBL:AY081629 IPI:IPI00538938 PIR:E86399
RefSeq:NP_174061.1 UniGene:At.28586 ProteinModelPortal:Q9FZJ4
SMR:Q9FZJ4 PRIDE:Q9FZJ4 EnsemblPlants:AT1G27410.1 GeneID:839631
KEGG:ath:AT1G27410 TAIR:At1g27410 HOGENOM:HOG000082912
InParanoid:Q9FZJ4 OMA:MAIDAHH PhylomeDB:Q9FZJ4
ProtClustDB:CLSN2682886 Genevestigator:Q9FZJ4 Uniprot:Q9FZJ4
Length = 422
Score = 298 (110.0 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 84/250 (33%), Positives = 127/250 (50%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR-------MCLL 184
+VD +R GS AYFLTH H DH GL WS GP+YCS TA L + LL
Sbjct: 7 SVDRWRNGS----QAYFLTHIHSDHTRGLSGGWSQGPLYCSRTTASLFPSRFPGFDLSLL 62
Query: 185 -VNPSYIHP-LELNTEHVIDGVKVTLL--EANHCPGAALIHFRLQDGQCYLHTGDFR--A 238
V P + L L + V++ L+ +A+HCPG+ + FR G C+L+TGDFR +
Sbjct: 63 RVVPLFSWTSLSLRSPSSGSTVRLHLMAIDAHHCPGSIMFLFRGDFG-CFLYTGDFRWDS 121
Query: 239 SRLMQSYPLLV----NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTL 294
++ LV V++LYLD TYCNP Y FPS+ V+L + + P
Sbjct: 122 DASDEARTTLVAAIDEFPVDILYLDNTYCNPIYSFPSRL----VAVQLVADIIASHPSHD 177
Query: 295 VVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLP 354
+++ S+GKE + + +S+ L +KI+ R R + + ++ T + T + +P
Sbjct: 178 IIIAVDSLGKEDLLVHVSRILNIKIWVWPERLRTMHLLGFQDI---FTTDTSLTRVRAVP 234
Query: 355 MSSLKFETLK 364
S +TL+
Sbjct: 235 RYSFSIQTLE 244
Score = 203 (76.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 66/244 (27%), Positives = 118/244 (48%)
Query: 209 LEANHCPGAALIHFRLQDGQCYLHTGDFR--ASRLMQSYPLLV----NHRVNVLYLDTTY 262
++A+HCPG+ + FR G C+L+TGDFR + ++ LV V++LYLD TY
Sbjct: 91 IDAHHCPGSIMFLFRGDFG-CFLYTGDFRWDSDASDEARTTLVAAIDEFPVDILYLDNTY 149
Query: 263 CNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
CNP Y FPS+ V+L + + P +++ S+GKE + + +S+ L +KI+
Sbjct: 150 CNPIYSFPSRL----VAVQLVADIIASHPSHDIIIAVDSLGKEDLLVHVSRILNIKIWVW 205
Query: 323 ASRRRVLQSFDW----------------PELSGNLCT-QGNDTLLHVLPMSSLKFETLKD 365
R R + + P S ++ T +G +T+ + + +K
Sbjct: 206 PERLRTMHLLGFQDIFTTDTSLTRVRAVPRYSFSIQTLEGLNTMCPTIGIMPSGLPWVK- 264
Query: 366 YLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL-IRPLSRGNITIYGVPYSEHSSFTELRE 424
+P+ +F T +ETV + +L + + + +Y V YS+HS + E+ E
Sbjct: 265 --RPFKGDDKLSGSFL-TASMKNETVSAKKELEAAAVHKFHDYMYSVHYSDHSCYEEIGE 321
Query: 425 FVQV 428
F+++
Sbjct: 322 FIKL 325
Score = 38 (18.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 92 LFSPPMKKLKA-SNGKSTATHLKKIVDRSCP 121
LFS L++ S+G + HL I CP
Sbjct: 67 LFSWTSLSLRSPSSGSTVRLHLMAIDAHHCP 97
>CGD|CAL0005993 [details] [associations]
symbol:orf19.2926 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR001279
SMART:SM00849 CGD:CAL0005993 EMBL:AACQ01000017 EMBL:AACQ01000015
GO:GO:0016787 eggNOG:COG1236 InterPro:IPR011084 Pfam:PF07522
RefSeq:XP_721154.1 RefSeq:XP_721426.1 ProteinModelPortal:Q5AIC7
GeneID:3636791 GeneID:3637070 KEGG:cal:CaO19.10443
KEGG:cal:CaO19.2926 Uniprot:Q5AIC7
Length = 830
Score = 151 (58.2 bits), Expect = 1.4e-24, Sum P(5) = 1.4e-24
Identities = 38/112 (33%), Positives = 61/112 (54%)
Query: 194 ELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ--DGQCY--LHTGDFRASRLMQSYPLL- 248
E+ + + G+ VT + ANHCPGAA+ F D + Y LH GDFR + + ++P+L
Sbjct: 371 EMESNDMTPGLYVTPITANHCPGAAIFFFESIGIDNKIYRILHCGDFRVNMEILNHPILR 430
Query: 249 ---VNHRVNVL-------YLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
+ H N L YLDTTY +PK+ P +E V + L ++ ++++
Sbjct: 431 PFSLTHSKNNLLQSIDKVYLDTTYMSPKHNLPKQELVCEIMANLFQDLIQQE 482
Score = 112 (44.5 bits), Expect = 1.4e-24, Sum P(5) = 1.4e-24
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIY 170
VDAF + + YFLTHFH DHYGG+ K+W++ ++
Sbjct: 258 VDAFCFAPHDTINQYFLTHFHADHYGGISKKWAYERVF 295
Score = 77 (32.2 bits), Expect = 1.4e-24, Sum P(5) = 1.4e-24
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 282 LTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG-VKIYANA--SRRRVLQSF-----D 333
LT+ KK K L+V+G Y IGKE + ++ISK L IY ++ SR+ + F D
Sbjct: 522 LTRPIRKK--KFLIVIGTYIIGKEKLAISISKRLNNCLIYLSSIGSRKDKFEIFKTYKND 579
Query: 334 W-------PELSGNLC-TQGNDTLLHVLPMS 356
+ + GN+ T +D ++H++PM+
Sbjct: 580 YLNSVMTIEKEFGNINDTNDSDCMIHLVPMT 610
Score = 72 (30.4 bits), Expect = 1.4e-24, Sum P(5) = 1.4e-24
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 408 IYGVPYSEHSSFTELREFV 426
+Y VPYSEHSSF EL F+
Sbjct: 741 LYSVPYSEHSSFRELAYFI 759
Score = 70 (29.7 bits), Expect = 7.3e-24, Sum P(5) = 7.3e-24
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 339 GNLC-TQGNDTLLHVLPMSSLKF-ETLKDYLK--PYGNQYAAVLAFRPTGWTYSE 389
GN+ T +D ++H++PM+ + E L Y Y + + PTGW+YS+
Sbjct: 592 GNINDTNDSDCMIHLVPMTLVSNNEELSKYFNHNKYYQFFERCIGLCPTGWSYSK 646
Score = 68 (29.0 bits), Expect = 1.4e-24, Sum P(5) = 1.4e-24
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 169 IYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI 201
IYC+ +T RL+ + ++P +I LEL+T + I
Sbjct: 319 IYCTGITGRLLTLRYSIDPRFIKHLELDTRYKI 351
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 274 DVLNYVVRLTKNCLKKQPKT 293
D+L+ + T N K++ KT
Sbjct: 703 DILSQIPTTTPNSTKRKTKT 722
>SGD|S000004745 [details] [associations]
symbol:PSO2 "Nuclease required for DNA single- and
double-strand break repair" species:4932 "Saccharomyces cerevisiae"
[GO:0006302 "double-strand break repair" evidence=TAS] [GO:0090305
"nucleic acid phosphodiester bond hydrolysis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IC;IDA] [GO:0003684 "damaged DNA
binding" evidence=IMP] [GO:0008409 "5'-3' exonuclease activity"
evidence=IMP;IDA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0036297 "interstrand cross-link repair" evidence=IGI;IMP]
SGD:S000004745 GO:GO:0005634 GO:GO:0046872 GO:GO:0003684
EMBL:BK006946 GO:GO:0006302 eggNOG:COG1236 GO:GO:0036297
EMBL:Z47071 GO:GO:0008409 KO:K15340 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 OMA:SEHSSFK OrthoDB:EOG4M68SB
EMBL:X64004 EMBL:X76917 PIR:S19646 RefSeq:NP_013857.1
ProteinModelPortal:P30620 DIP:DIP-6301N IntAct:P30620
MINT:MINT-699963 STRING:P30620 PaxDb:P30620 EnsemblFungi:YMR137C
GeneID:855168 KEGG:sce:YMR137C CYGD:YMR137c HOGENOM:HOG000115743
NextBio:978602 Genevestigator:P30620 GermOnline:YMR137C
Uniprot:P30620
Length = 661
Score = 213 (80.0 bits), Expect = 3.8e-21, Sum P(3) = 3.8e-21
Identities = 65/202 (32%), Positives = 95/202 (47%)
Query: 82 KSNSESEANCLFSPPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSI 141
K N S + SP K + K T +K ++ S K G VD F Y +
Sbjct: 181 KKNIRSFISNPSSPAKTKRDIATSKKP-TRVKLVLP-SFKIIKFNNGHEIVVDGFNYKAS 238
Query: 142 KGCSAYFLTHFHYDHYGGLGKRWSH---GPI----YCSPLTARLVRMCLLVNPSYIHPLE 194
+ S YFL+HFH DHY GL K W++ PI YCS +TA LV + + I L
Sbjct: 239 ETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSKITAILVNLKFKIPMDEIQILP 298
Query: 195 LNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQCY-------LHTGDFRAS-RLMQSY 245
+N + D + V L+ANHCPGA ++ F+ Y LHTGDFR++ +++++
Sbjct: 299 MNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANSYDKPIRQILHTGDFRSNAKMIETI 358
Query: 246 PLLVNHRVNVLYLDTTYCNPKY 267
+ N +D Y + Y
Sbjct: 359 QKWLAETANET-IDQVYLDTTY 379
Score = 171 (65.3 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 46/133 (34%), Positives = 65/133 (48%)
Query: 169 IYCSPLTARLVRMCLLVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDG 227
+YCS +TA LV + + I L +N + D + V L+ANHCPGA ++ F+
Sbjct: 273 LYCSKITAILVNLKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLA 332
Query: 228 QCY-------LHTGDFRASRLM----QSYPL-LVNHRVNVLYLDTTYCNPKYKFPSKEDV 275
Y LHTGDFR++ M Q + N ++ +YLDTTY Y FPS+ V
Sbjct: 333 NSYDKPIRQILHTGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSV 392
Query: 276 LNYVVRLTKNCLK 288
V T +K
Sbjct: 393 CETVADFTLRLIK 405
Score = 79 (32.9 bits), Expect = 3.8e-21, Sum P(3) = 3.8e-21
Identities = 29/91 (31%), Positives = 51/91 (56%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYA--NASR----RRVLQSFD-----WPE--LS 338
+ L +VG Y+IGKE + + I + L K++ N+ + VLQ+ + W E L+
Sbjct: 434 RVLFLVGTYTIGKEKLAIKICEFLKTKLFVMPNSVKFSMMLTVLQNNENQNDMWDESLLT 493
Query: 339 GNLCTQGNDTLLHVLPMSSLKF-ETLKDYLK 368
NL +++ +H++P+ LK ET++ YLK
Sbjct: 494 SNL----HESSVHLVPIRVLKSQETIEAYLK 520
Score = 67 (28.6 bits), Expect = 3.8e-21, Sum P(3) = 3.8e-21
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 397 LIRPLSRGN-ITIYGVPYSEHSSFTELREF 425
++R + N ++ VPYSEHSSF +L +F
Sbjct: 591 ILRQYKKYNKFQVFNVPYSEHSSFNDLVKF 620
Score = 66 (28.3 bits), Expect = 8.3e-20, Sum P(3) = 8.3e-20
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 334 WPE--LSGNLCTQGNDTLLHVLPMSSLKF-ETLKDYLKP-------YGNQYAAVLAFRPT 383
W E L+ NL +++ +H++P+ LK ET++ YLK Y V+ F PT
Sbjct: 487 WDESLLTSNL----HESSVHLVPIRVLKSQETIEAYLKSLKELETDYVKDIEDVVGFIPT 542
Query: 384 GWTYS 388
GW+++
Sbjct: 543 GWSHN 547
>WB|WBGene00045237 [details] [associations]
symbol:mrt-1 species:6239 "Caenorhabditis elegans"
[GO:0008408 "3'-5' exonuclease activity" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0000003
"reproduction" evidence=IMP] [GO:0007004 "telomere maintenance via
telomerase" evidence=IGI] [GO:0006289 "nucleotide-excision repair"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0000003 GO:GO:0003697
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0008408 GO:GO:0007004
GO:GO:0006289 eggNOG:COG1236 InterPro:IPR011084 Pfam:PF07522
EMBL:Z81080 RefSeq:NP_740895.1 ProteinModelPortal:Q8T3E0 SMR:Q8T3E0
PaxDb:Q8T3E0 EnsemblMetazoa:F39H2.5.1 EnsemblMetazoa:F39H2.5.2
GeneID:172666 KEGG:cel:CELE_F39H2.5 UCSC:F39H2.5.1 CTD:172666
WormBase:F39H2.5 GeneTree:ENSGT00390000008639 HOGENOM:HOG000018686
InParanoid:Q8T3E0 OMA:HENIVIP NextBio:876487 Uniprot:Q8T3E0
Length = 608
Score = 271 (100.5 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 92/317 (29%), Positives = 151/317 (47%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL---L 184
G +VD F S G FLTH H DHY GL K+W+ +YCSP TA+L+ +
Sbjct: 220 GEDISVDYFLKKS--GSRYNFLTHAHSDHYRGLDKKWTRS-VYCSPETAKLLPHIMGYTA 276
Query: 185 VNP---SYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHF---RLQD--GQCYLHTGDF 236
+P I+PLE N H D +VTL+ ANHCPGA + F ++++ G L TGDF
Sbjct: 277 DSPPPAGLINPLEENVPHKFDSFQVTLVNANHCPGAVMFVFEGSKIEEIAGGAVLCTGDF 336
Query: 237 RASRL-MQSY-P-----LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK 289
RA ++ ++S P + + ++YLD TY + FP + + +++ ++
Sbjct: 337 RADKMFLESLKPGNQLHWMTEIKFGIIYLDNTYFSLDMPFPERCEAEKILLK----AIEA 392
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
P +V+ + +G+E + AIS+ L I R+ + D+ G L Q D
Sbjct: 393 HPHENIVIPLHRLGREELIQAISRILNEPIMVYDERKVISDLLDFSSNCGVL-KQYRD-- 449
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIY 409
+ V+ S Y + +Q + ++ +T+ V + +IR
Sbjct: 450 IKVIKKGS--------YCEI--SQNSVIIDISMLYYTFGNGVNDDEGIIR---------- 489
Query: 410 GVPYSEHSSFTELREFV 426
+PYS+HSS +E+ +F+
Sbjct: 490 -IPYSDHSSRSEILKFL 505
>RGD|708574 [details] [associations]
symbol:Dclre1c "DNA cross-link repair 1C" species:10116 "Rattus
norvegicus" [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA;ISO] [GO:0000723
"telomere maintenance" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA;ISO] [GO:0006310 "DNA
recombination" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA;ISO] [GO:0010212 "response to ionizing radiation"
evidence=IEA;ISO] [GO:0030183 "B cell differentiation"
evidence=IEA;ISO] [GO:0051276 "chromosome organization"
evidence=ISO] RGD:708574 GO:GO:0005634 GO:GO:0010212 GO:GO:0006310
GO:GO:0030183 GO:GO:0006302 GO:GO:0090305 GO:GO:0000723
eggNOG:COG1236 GO:GO:0000014 GO:GO:0008409 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 CTD:64421
HOGENOM:HOG000231568 HOVERGEN:HBG081421 KO:K10887 OrthoDB:EOG4894M0
OMA:MFRNMPD EMBL:AF395746 EMBL:BC083546 IPI:IPI00209347
RefSeq:NP_671486.2 UniGene:Rn.204346 ProteinModelPortal:Q5XIX3
STRING:Q5XIX3 PhosphoSite:Q5XIX3 PRIDE:Q5XIX3
Ensembl:ENSRNOT00000021506 GeneID:259171 KEGG:rno:259171
UCSC:RGD:708574 InParanoid:Q5XIX3 NextBio:624222
ArrayExpress:Q5XIX3 Genevestigator:Q5XIX3
GermOnline:ENSRNOG00000015980 Uniprot:Q5XIX3
Length = 698
Score = 224 (83.9 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 87/289 (30%), Positives = 148/289 (51%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTE---HVID---GVK----VTLLEAN 212
+YCSP+T L LL +P Y I +E+ T ++D G K VTLL A
Sbjct: 59 LYCSPVTKEL----LLTSPKYKFWENRIIAIEIETPTQVSLVDEASGEKEEVVVTLLPAG 114
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNH--RVNVL---YLDTTYCNPK- 266
HCPG+ + F+ +G L+TGDFR ++ S L++ RV + YLDTT+C+P+
Sbjct: 115 HCPGSVMFLFQGSNGTV-LYTGDFRLAKGEVSRMELLHSGGRVKDIQSVYLDTTFCDPRF 173
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASR 325
Y+ PS+E+ L V+ L ++ + + PK +V + + G E +F +S+ LGV+++ +
Sbjct: 174 YQIPSREECLRGVLELVRSWITRSPKHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-- 231
Query: 326 RRVLQSF-DWPELSGNLCTQGNDTLLHVL--PMSSLKFETLKDYLKPYG--NQYAAVL-- 378
L F + P++ +L T N T +H P + F+ K P G ++ VL
Sbjct: 232 ---LDMFKNMPDILHHLTTDRN-TQIHACRHPKAEEYFQWNK---LPCGMASKTKTVLHT 284
Query: 379 -AFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ +P+ + E ++R G + Y +S HSS++E+++F+
Sbjct: 285 ISIKPSTMWFGERTRKTNVIVRT---GESS-YRACFSFHSSYSEIKDFL 329
Score = 77 (32.2 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 25/66 (37%), Positives = 33/66 (50%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMCL 183
++D F ++K AYFL+H H DH GL KR + YCSP+T L L
Sbjct: 15 SIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSMKRRLECSLKVFLYCSPVTKEL----L 69
Query: 184 LVNPSY 189
L +P Y
Sbjct: 70 LTSPKY 75
>UNIPROTKB|Q96SD1 [details] [associations]
symbol:DCLRE1C "Protein artemis" species:9606 "Homo
sapiens" [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0010212 "response to ionizing
radiation" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000014
"single-stranded DNA specific endodeoxyribonuclease activity"
evidence=IDA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IDA] InterPro:IPR001279 SMART:SM00849 GO:GO:0005634
GO:GO:0010212 EMBL:CH471072 GO:GO:0006310 GO:GO:0030183
GO:GO:0006302 GO:GO:0000723 eggNOG:COG1236 GO:GO:0000014
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 CTD:64421
HOVERGEN:HBG081421 KO:K10887 EMBL:AJ296101 EMBL:AF395747
EMBL:AF395748 EMBL:AF395749 EMBL:AF395750 EMBL:AF395751
EMBL:AF395752 EMBL:AK021422 EMBL:DQ504427 EMBL:AL360083
EMBL:AC069544 EMBL:BC000863 EMBL:BC009185 EMBL:BC022254
IPI:IPI00290459 IPI:IPI00290918 IPI:IPI00396624 IPI:IPI00607742
RefSeq:NP_001029027.1 RefSeq:NP_001029029.1 RefSeq:NP_001029030.1
RefSeq:NP_071932.2 UniGene:Hs.656065 PDB:4HTP PDBsum:4HTP
ProteinModelPortal:Q96SD1 SMR:Q96SD1 STRING:Q96SD1
PhosphoSite:Q96SD1 DMDM:71153325 PaxDb:Q96SD1 PRIDE:Q96SD1
Ensembl:ENST00000357717 Ensembl:ENST00000378241
Ensembl:ENST00000378246 Ensembl:ENST00000378249
Ensembl:ENST00000378254 Ensembl:ENST00000378255
Ensembl:ENST00000378258 Ensembl:ENST00000378278
Ensembl:ENST00000378289 Ensembl:ENST00000396817
Ensembl:ENST00000418843 Ensembl:ENST00000453695
Ensembl:ENST00000456122 GeneID:64421 KEGG:hsa:64421 UCSC:uc001inl.3
UCSC:uc001ino.3 UCSC:uc010qbx.2 GeneCards:GC10M014939
HGNC:HGNC:17642 MIM:602450 MIM:603554 MIM:605988 neXtProt:NX_Q96SD1
Orphanet:39041 Orphanet:275 PharmGKB:PA27176 InParanoid:Q96SD1
OMA:RTRTIHR PhylomeDB:Q96SD1 GenomeRNAi:64421 NextBio:66403
ArrayExpress:Q96SD1 Bgee:Q96SD1 Genevestigator:Q96SD1
GermOnline:ENSG00000152457 Uniprot:Q96SD1
Length = 692
Score = 224 (83.9 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 86/289 (29%), Positives = 148/289 (51%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTE---HVID---GVK----VTLLEAN 212
+YCSP+T L LL +P Y I +E+ T ++D G K VTLL A
Sbjct: 59 LYCSPVTKEL----LLTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAG 114
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNH--RVNVL---YLDTTYCNPK- 266
HCPG+ + F+ +G L+TGDFR ++ + L++ RV + YLDTT+C+P+
Sbjct: 115 HCPGSVMFLFQGNNGTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRF 173
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASR 325
Y+ PS+E+ L+ V+ L ++ + + P +V + + G E +F +S+ LGV+++ N
Sbjct: 174 YQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-- 231
Query: 326 RRVLQSF-DWPELSGNLCTQGNDTLLHVL--PMSSLKFETLKDYLKPYG----NQYAA-V 377
L F + PE+ +L T N T +H P + F+ K P G N+ +
Sbjct: 232 ---LDMFRNMPEILHHLTTDRN-TQIHACRHPKAEEYFQWSK---LPCGITSRNRIPLHI 284
Query: 378 LAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ +P+ + E ++R G + Y +S HSS++E+++F+
Sbjct: 285 ISIKPSTMWFGERSRKTNVIVRT---GESS-YRACFSFHSSYSEIKDFL 329
Score = 74 (31.1 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMCL 183
++D F +++ AYFL+H H DH GL KR + YCSP+T L L
Sbjct: 15 SIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL----L 69
Query: 184 LVNPSY 189
L +P Y
Sbjct: 70 LTSPKY 75
>MGI|MGI:2441769 [details] [associations]
symbol:Dclre1c "DNA cross-link repair 1C, PSO2 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000014
"single-stranded DNA specific endodeoxyribonuclease activity"
evidence=ISO] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=ISO] [GO:0010212 "response to ionizing radiation"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030183 "B cell differentiation" evidence=IMP] [GO:0051276
"chromosome organization" evidence=IMP] InterPro:IPR001279
SMART:SM00849 MGI:MGI:2441769 GO:GO:0005634 GO:GO:0010212
GO:GO:0006310 GO:GO:0030183 GO:GO:0006302 GO:GO:0000723
EMBL:AL732620 eggNOG:COG1236 GO:GO:0000014 GO:GO:0008409
InterPro:IPR011084 Pfam:PF07522 GeneTree:ENSGT00530000063183
CTD:64421 HOGENOM:HOG000231568 HOVERGEN:HBG081421 KO:K10887
OrthoDB:EOG4894M0 OMA:MFRNMPD EMBL:AF387731 EMBL:AK037126
EMBL:AK052369 EMBL:AK088810 IPI:IPI00170222 IPI:IPI00221500
IPI:IPI00607937 RefSeq:NP_001103684.1 RefSeq:NP_666226.2
RefSeq:NP_783614.1 UniGene:Mm.23483 UniGene:Mm.442710
ProteinModelPortal:Q8K4J0 SMR:Q8K4J0 STRING:Q8K4J0
PhosphoSite:Q8K4J0 PRIDE:Q8K4J0 Ensembl:ENSMUST00000061852
Ensembl:ENSMUST00000102988 Ensembl:ENSMUST00000115066 GeneID:227525
KEGG:mmu:227525 UCSC:uc008idz.2 UCSC:uc008iea.2 UCSC:uc008ieb.2
InParanoid:A2AJG6 NextBio:378619 Bgee:Q8K4J0 Genevestigator:Q8K4J0
Uniprot:Q8K4J0
Length = 705
Score = 220 (82.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 86/289 (29%), Positives = 146/289 (50%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTE---HVID---GVK----VTLLEAN 212
+YCSP+T L LL +P Y I +E+ T ++D G K VTLL A
Sbjct: 59 LYCSPVTKEL----LLTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAG 114
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNH--RVNVL---YLDTTYCNPK- 266
HCPG+ + F+ +G L+TGDFR ++ S L++ RV + YLDTT+C+P+
Sbjct: 115 HCPGSVMFLFQGSNGTV-LYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRF 173
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASR 325
Y+ PS+E L ++ L ++ + + P +V + + G E +F +S+ LGV+++ +
Sbjct: 174 YQIPSREQCLRGILELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-- 231
Query: 326 RRVLQSF-DWPELSGNLCTQGNDTLLHVL--PMSSLKFETLKDYLKPYG----NQYAA-V 377
L F + P++ +L T N T +H P + F+ K P G N+ A
Sbjct: 232 ---LDMFKNMPDILHHLTTDRN-TQIHACRHPKAEECFQWNK---LPCGITSQNKTALHT 284
Query: 378 LAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ +P+ + E ++R G + Y +S HSSF+E+++F+
Sbjct: 285 ISIKPSTMWFGERTRKTNVIVRT---GESS-YRACFSFHSSFSEIKDFL 329
Score = 77 (32.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 25/66 (37%), Positives = 33/66 (50%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMCL 183
++D F ++K AYFL+H H DH GL KR + YCSP+T L L
Sbjct: 15 SIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKEL----L 69
Query: 184 LVNPSY 189
L +P Y
Sbjct: 70 LTSPKY 75
>UNIPROTKB|F1NW11 [details] [associations]
symbol:DCLRE1C "Protein artemis" species:9031 "Gallus
gallus" [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0010212
"response to ionizing radiation" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0010212 GO:GO:0006310 GO:GO:0006302 GO:GO:0000723
GO:GO:0000014 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 IPI:IPI00602543 OMA:MFRNMPD
EMBL:AADN02060984 Ensembl:ENSGALT00000022573 Uniprot:F1NW11
Length = 714
Score = 208 (78.3 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 78/286 (27%), Positives = 139/286 (48%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTEHVI----------DGVKVTLLEAN 212
+YCSP+T L LL N Y I LE+ T I + ++VTLL A
Sbjct: 59 LYCSPVTKEL----LLTNSKYAFWENHIAALEVETPTQISLVDETTGEKEDIEVTLLPAG 114
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNV-----LYLDTTYCNPK- 266
HCPG+ + F+ ++G L+TGDFR ++ + L++ +V +YLDTT+C+P+
Sbjct: 115 HCPGSVMFLFQGENGTV-LYTGDFRLAKGEAARMELLHSGTSVKDIQSVYLDTTFCDPRF 173
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASR 325
Y PS+E+ L+ ++ L ++ +V + + G E +F+ +S+ LG+K++ N
Sbjct: 174 YHIPSREECLSGILELVRSWTTLSRYHVVWLNCKAAYGYEYLFINLSEELGIKVHVNK-- 231
Query: 326 RRVLQSF-DWPELSGNLCTQGNDTLLHVL--PMSS--LKFETLKDYLKPYGNQYAAVLAF 380
L F + PE+ ++ T T +H P ++ L + V++
Sbjct: 232 ---LDMFKNMPEILYHITTD-RYTQIHACRHPKDDDYVRGNRLPCGITCQNGTPLHVISI 287
Query: 381 RPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+P+ + E + ++R G T Y +S HSS++E+ +F+
Sbjct: 288 KPSTMWFGERIKKTNVIVRT---GEST-YRACFSFHSSYSEIMDFL 329
Score = 83 (34.3 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLG-----KRWSHG---PIYCSPLTARLVRMCL 183
++D F Y +++ AYFL+H H DH GL +R +YCSP+T L L
Sbjct: 15 SIDRFDYDNLRA-RAYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKEL----L 69
Query: 184 LVNPSY 189
L N Y
Sbjct: 70 LTNSKY 75
>UNIPROTKB|Q5QJC2 [details] [associations]
symbol:DCLRE1C "Protein artemis" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0006281 GO:GO:0006310
GO:GO:0004527 GO:GO:0090305 GO:GO:0004519 eggNOG:COG1236
InterPro:IPR011084 Pfam:PF07522 EMBL:AY376898 IPI:IPI00602543
RefSeq:NP_001026765.1 UniGene:Gga.22874 ProteinModelPortal:Q5QJC2
STRING:Q5QJC2 GeneID:430764 KEGG:gga:430764 CTD:64421
HOGENOM:HOG000231568 HOVERGEN:HBG081421 InParanoid:Q5QJC2 KO:K10887
OrthoDB:EOG4894M0 NextBio:20830567 Uniprot:Q5QJC2
Length = 714
Score = 207 (77.9 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 78/286 (27%), Positives = 139/286 (48%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTEHVI----------DGVKVTLLEAN 212
+YCSP+T L LL N Y I LE+ T I + ++VTLL A
Sbjct: 59 LYCSPVTKEL----LLTNSKYAFWENHIVALEVETPTQISLVDETTGEKEDIEVTLLPAG 114
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNV-----LYLDTTYCNPK- 266
HCPG+ + F+ ++G L+TGDFR ++ + L++ +V +YLDTT+C+P+
Sbjct: 115 HCPGSVMFLFQGENGTV-LYTGDFRLAKGEAARMELLHSGTSVKDIQSVYLDTTFCDPRF 173
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASR 325
Y PS+E+ L+ ++ L ++ +V + + G E +F+ +S+ LG+K++ N
Sbjct: 174 YHIPSREECLSGILELVRSWTTLSRYHVVWLNCKAAYGYEYLFINLSEELGIKVHVNK-- 231
Query: 326 RRVLQSF-DWPELSGNLCTQGNDTLLHVL--PMSS--LKFETLKDYLKPYGNQYAAVLAF 380
L F + PE+ ++ T T +H P ++ L + V++
Sbjct: 232 ---LDMFKNMPEILYHITTD-RYTQIHACRHPKDDDYVRGNRLPCGITCQNGTPLHVISI 287
Query: 381 RPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+P+ + E + ++R G T Y +S HSS++E+ +F+
Sbjct: 288 KPSTMWFGERIKKTNVIVRT---GEST-YRACFSFHSSYSEIMDFL 329
Score = 83 (34.3 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLG-----KRWSHG---PIYCSPLTARLVRMCL 183
++D F Y +++ AYFL+H H DH GL +R +YCSP+T L L
Sbjct: 15 SIDRFDYDNLRA-RAYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKEL----L 69
Query: 184 LVNPSY 189
L N Y
Sbjct: 70 LTNSKY 75
>UNIPROTKB|F1RW83 [details] [associations]
symbol:DCLRE1C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA] GO:GO:0010212
GO:GO:0006310 GO:GO:0030183 GO:GO:0006302 GO:GO:0000723
GO:GO:0000014 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 OMA:MFRNMPD EMBL:CU929591
EMBL:FP312867 Ensembl:ENSSSCT00000012093 Uniprot:F1RW83
Length = 695
Score = 219 (82.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 84/288 (29%), Positives = 141/288 (48%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTE---HVID---GVK----VTLLEAN 212
+YCSP+T L LL NP Y I +E+ T +ID G K VTLL A
Sbjct: 60 LYCSPVTREL----LLTNPRYRFWEKRIVSIEVETPTQISLIDEASGEKEEIVVTLLPAG 115
Query: 213 HCPGAALIHFRLQDGQCYLHTGDF----RASRLMQSYPLLVNHRVNVLYLDTTYCNPKY- 267
HCPG+ + +FR G L+TGDF A+R+ + + +YLDTT+C+PKY
Sbjct: 116 HCPGSVMSYFRXTHGTV-LYTGDFWQKGEAARMELLHSGGSVKDIQSVYLDTTFCHPKYY 174
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRR 326
+ PS+E+ L ++ L ++ + + P +V + + G E +F +S+ GV+++ N
Sbjct: 175 QIPSREECLRGILELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVNK--- 231
Query: 327 RVLQSF-DWPELSGNLCTQGNDTLLHVL--PMSSLKFETLKDYLKPYG----NQYAA-VL 378
L F + P++ +L T T +H P + F K P G N+ ++
Sbjct: 232 --LDMFRNMPDILHHLTTD-RGTQIHACRHPKAEEYFHWNK---LPCGITSKNRIPLHII 285
Query: 379 AFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ +P+ + E ++R G + Y +S HSS++E+++F+
Sbjct: 286 SIKPSTMWFGERTRKTNVIVRT---GESS-YRACFSFHSSYSEIKDFL 329
Score = 69 (29.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHY-DHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 15 SIDRFDRENLRA-RAYFLSHCHKADHMKGLRASTLKRRLECSLKVSLYCSPVTREL---- 69
Query: 183 LLVNPSY 189
LL NP Y
Sbjct: 70 LLTNPRY 76
>UNIPROTKB|E2RBE9 [details] [associations]
symbol:DCLRE1C "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030183 "B cell differentiation"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] [GO:0000014 "single-stranded
DNA specific endodeoxyribonuclease activity" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 GO:GO:0010212 GO:GO:0006310
GO:GO:0030183 GO:GO:0006302 GO:GO:0000723 GO:GO:0000014
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 CTD:64421 KO:K10887 OMA:MFRNMPD
EMBL:AAEX03001258 RefSeq:XP_544251.2 ProteinModelPortal:E2RBE9
Ensembl:ENSCAFT00000007553 GeneID:487123 KEGG:cfa:487123
NextBio:20860765 Uniprot:E2RBE9
Length = 693
Score = 206 (77.6 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 84/289 (29%), Positives = 143/289 (49%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTEH---VID---GVK----VTLLEAN 212
+YCSP+T L LL +P Y I +E+ T ++D G K VTLL A
Sbjct: 59 LYCSPVTKEL----LLTSPRYRFWEKRIISIEIETPTQIPLVDEASGEKEDIVVTLLPAG 114
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNH--RVNVL---YLDTTYCNPK- 266
HCPG+ + F+ +G L+TGDFR ++ + L++ RV + YLDTT+C+PK
Sbjct: 115 HCPGSVMFLFQGNNGTV-LYTGDFRMAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKF 173
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASR 325
Y+ PS+E+ L + L ++ + + P +V + + G E +F +S+ GV+I+ +
Sbjct: 174 YQIPSREECLRGISELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQIHVDK-- 231
Query: 326 RRVLQSF-DWPELSGNLCTQGNDTLLHVL--PMSSLKFETLKDYLKPYG----NQYAA-V 377
L F + P++ +L T N T +H P + F K P G N+
Sbjct: 232 ---LDMFRNMPDILHHLTTDRN-TQIHACRHPKAEEYFHWNK---LPCGAISKNRIPLHT 284
Query: 378 LAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ +P+ + E ++R G + Y +S HSS++E+++F+
Sbjct: 285 ISIKPSTMWFGERTRKTNVIVRT---GESS-YRACFSFHSSYSEIKDFL 329
Score = 76 (31.8 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 25/66 (37%), Positives = 33/66 (50%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMCL 183
++D F ++K AYFL+H H DH GL KR + YCSP+T L L
Sbjct: 15 SIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPALKRRLECSLKVRLYCSPVTKEL----L 69
Query: 184 LVNPSY 189
L +P Y
Sbjct: 70 LTSPRY 75
>UNIPROTKB|A6QLL4 [details] [associations]
symbol:DCLRE1C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0010212 GO:GO:0006310 GO:GO:0030183
GO:GO:0006302 GO:GO:0000723 eggNOG:COG1236 GO:GO:0000014
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 CTD:64421 HOGENOM:HOG000231568
HOVERGEN:HBG081421 KO:K10887 OrthoDB:EOG4894M0 OMA:MFRNMPD
EMBL:DAAA02035537 EMBL:DAAA02035538 EMBL:BC148006 IPI:IPI00701939
RefSeq:NP_001093847.1 UniGene:Bt.59419 STRING:A6QLL4
Ensembl:ENSBTAT00000013484 GeneID:517886 KEGG:bta:517886
InParanoid:A6QLL4 NextBio:20872534 Uniprot:A6QLL4
Length = 710
Score = 207 (77.9 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 77/285 (27%), Positives = 141/285 (49%)
Query: 169 IYCSPLTARLVRMC--------LLVNPSYIHPLELNTEHVIDGVK----VTLLEANHCPG 216
+YCSP+T L+ +V+ P +++ G K VTLL A HCPG
Sbjct: 59 LYCSPVTKELLLTSPKYRFWEKRIVSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG 118
Query: 217 AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNH--RVNVL---YLDTTYCNPKY-KFP 270
+ + F+ +G L+TGDFR ++ + L++ RV + YLDTT+CNPKY + P
Sbjct: 119 SVMFLFQGNNGTV-LYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCNPKYYQIP 177
Query: 271 SKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVL 329
S+E+ L ++ L ++ + + P +V + + G E +F +S+ G++++ + L
Sbjct: 178 SREECLRGIMELVRSWISRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVDK-----L 232
Query: 330 QSF-DWPELSGNLCTQGNDTLLHVL--PMSSLKFETLKDYLKPYG----NQYAA-VLAFR 381
F + P++ +L T DT +H P + F+ K P G N+ ++ +
Sbjct: 233 DMFRNMPDILHHLTTD-RDTQIHACRHPKAEEYFQWSK---LPCGITSKNRIPLHTISIK 288
Query: 382 PTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
P+ + E + ++I R + Y +S HSS++E+++F+
Sbjct: 289 PSTMWFGERT-RKTNIIM---RTGESSYRACFSFHSSYSEIKDFL 329
Score = 75 (31.5 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 28/80 (35%), Positives = 39/80 (48%)
Query: 119 SCPFYKKIPGTP-FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI---- 169
SC F ++ P ++D F +++ AYFL+H H DH GL KR +
Sbjct: 2 SC-FEGQMAEYPTISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVCL 59
Query: 170 YCSPLTARLVRMCLLVNPSY 189
YCSP+T L LL +P Y
Sbjct: 60 YCSPVTKEL----LLTSPKY 75
>TAIR|locus:505006131 [details] [associations]
symbol:AT1G19025 "AT1G19025" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 KO:K15340 InterPro:IPR011084
Pfam:PF07522 IPI:IPI00546684 RefSeq:NP_564070.1 UniGene:At.41767
UniGene:At.74256 ProteinModelPortal:F4IDZ7 SMR:F4IDZ7
EnsemblPlants:AT1G19025.1 GeneID:838484 KEGG:ath:AT1G19025
OMA:IRPSAQW Uniprot:F4IDZ7
Length = 549
Score = 203 (76.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 68/216 (31%), Positives = 101/216 (46%)
Query: 128 GTPFTVDAFR-YGSIKGCSAY-FLTHFHYDHYGGLG-KRWSHGPIYCSPLT-ARLVRMCL 183
G PF VD F Y K + FLTH H DH G+ PIY + LT + L++
Sbjct: 8 GLPFAVDTFGPYTETKRRKRHHFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFP 67
Query: 184 LVNPSYIHPLELNTEHVIDG----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
++ SY +E+ ++D KVT +ANHCPGA + F G LHTGD R +
Sbjct: 68 QLDESYFVRVEIGQSVIVDDPDGEFKVTAFDANHCPGAVMFLFEGSFGNI-LHTGDCRLT 126
Query: 240 R-LMQSYPLLV---NH------RVNVLYLDTTYCNPKY--KFPSKEDVLNYVVRLTKNCL 287
+ S P +H + ++LD T+ + +FP+K + ++ NC+
Sbjct: 127 LDCLHSLPEKYVGRSHGMKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQII----NCI 182
Query: 288 KKQPKTLVVVGAYS-IGKESVFLAISKALGVKIYAN 322
P VV A +G+E V L +S+ G KIY +
Sbjct: 183 WNHPDAPVVYLACDMLGQEDVLLEVSRTFGSKIYVD 218
>ZFIN|ZDB-GENE-041210-72 [details] [associations]
symbol:dclre1c "DNA cross-link repair 1C, PSO2
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 ZFIN:ZDB-GENE-041210-72
GO:GO:0005634 GO:GO:0006281 GO:GO:0006310 GO:GO:0004527
GO:GO:0090305 GO:GO:0004519 eggNOG:COG1236 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 CTD:64421
HOGENOM:HOG000231568 HOVERGEN:HBG081421 KO:K10887 OrthoDB:EOG4894M0
EMBL:BX901962 EMBL:BC115304 IPI:IPI00507176 RefSeq:NP_001038566.1
UniGene:Dr.133955 ProteinModelPortal:Q5RGE5 STRING:Q5RGE5
Ensembl:ENSDART00000067188 GeneID:566285 KEGG:dre:566285
InParanoid:Q5RGE5 OMA:MFRNMPD NextBio:20888116 Bgee:Q5RGE5
Uniprot:Q5RGE5
Length = 639
Score = 158 (60.7 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 80/289 (27%), Positives = 133/289 (46%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTE---HVID---G----VKVTLLEAN 212
+YCS +T L LL NP Y I PLEL++ +ID G V VTLL A
Sbjct: 59 LYCSYVTKEL----LLSNPRYAFWEDHIVPLELDSPTSISLIDESTGETEDVVVTLLSAG 114
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
HCPG+ + F G L+TGDFR A+R+ + + +Y+DTT+ +PKY
Sbjct: 115 HCPGSVMFLFEGAKGTV-LYTGDFRLAVGDAARMEYLHSGDRVKDIQSVYIDTTFFDPKY 173
Query: 268 -KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASR 325
+ PS+E L + +L ++ + + P +V + + G E +F + + +I+ N+
Sbjct: 174 YQIPSREACLAGIQQLVQDWICQSPYHVVWLNCKAAYGYEYLFTNLGQEFNSQIHVNS-- 231
Query: 326 RRVLQSFD-WPELSGNLC--TQGNDTLLHVL--PMSSLKFETLK---DYLKPYGNQYAAV 377
L F PE+ LC T T +H P F + P G +
Sbjct: 232 ---LDMFKKMPEI---LCHVTTNRATQIHACRHPKDEEFFRANRLPCGSTAPDGIPLN-I 284
Query: 378 LAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ +P+ + E +++ G+ + Y +S HSS+ E+++F+
Sbjct: 285 ISIKPSTIWFGERTRKTSVVVK---MGSSS-YRACFSFHSSYLEVKDFL 329
Score = 68 (29.0 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 29/66 (43%), Positives = 35/66 (53%)
Query: 146 AYFLTHFHYDHYGGL-G---KR---WSHG-PIYCSPLTARLVRMCLLVNPSY------IH 191
AYFL+H H DH GL G KR +S +YCS +T L LL NP Y I
Sbjct: 28 AYFLSHCHKDHMKGLKGPLLKRKLKFSLTVKLYCSYVTKEL----LLSNPRYAFWEDHIV 83
Query: 192 PLELNT 197
PLEL++
Sbjct: 84 PLELDS 89
>UNIPROTKB|Q0C1L6 [details] [associations]
symbol:HNE_1669 "Putative uncharacterized protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001279 SMART:SM00849 GO:GO:0016787 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG1236 RefSeq:YP_760377.1
ProteinModelPortal:Q0C1L6 STRING:Q0C1L6 GeneID:4288204
KEGG:hne:HNE_1669 PATRIC:32216161 HOGENOM:HOG000035995 OMA:STFGLPI
ProtClustDB:CLSK2517173 BioCyc:HNEP228405:GI69-1701-MONOMER
InterPro:IPR026360 TIGRFAMs:TIGR04122 Uniprot:Q0C1L6
Length = 333
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/156 (28%), Positives = 72/156 (46%)
Query: 149 LTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTL 208
+TH H DH R HG + +P T L M P+ P+ + V+VTL
Sbjct: 35 VTHGHADH-----ARAGHGRVIATPET--LAIMEARYGPTEGWPVAYGETVEVGDVRVTL 87
Query: 209 LEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYK 268
A H G+A + + G+ + TGDF+ + + P V +VL + T+ P ++
Sbjct: 88 YPAGHVLGSAQVLLE-RAGERVIVTGDFKRAA-DPTCPPFVPIACDVLITEATFGLPVFR 145
Query: 269 FPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK 304
P D + V+ L + P+ V+VGAY++GK
Sbjct: 146 HPPASDEIAKVMER----LAESPERCVLVGAYALGK 177
>TIGR_CMR|ECH_0966 [details] [associations]
symbol:ECH_0966 "metallo-beta-lactamase family, beta-CASP
subfamily" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0016070 "RNA
metabolic process" evidence=ISS] InterPro:IPR001279
InterPro:IPR004613 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0016787
InterPro:IPR011108 eggNOG:COG0595 PANTHER:PTHR11203:SF22
HOGENOM:HOG000280200 KO:K07021 RefSeq:YP_507753.1
ProteinModelPortal:Q2GFN0 STRING:Q2GFN0 GeneID:3928071
KEGG:ech:ECH_0966 PATRIC:20577314 OMA:NIHVSGH
ProtClustDB:CLSK749469 BioCyc:ECHA205920:GJNR-969-MONOMER
Uniprot:Q2GFN0
Length = 540
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 63/234 (26%), Positives = 98/234 (41%)
Query: 115 IVDRSCPFYK-KIPGTPFTV-D-AFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS--HGPI 169
I+D F +PG V D +F + K LTH H DH GG+ W+ PI
Sbjct: 32 IIDFGAGFADDNMPGIDMIVADISFIKKNRKNLLGIVLTHAHEDHIGGIQYLWNDLQCPI 91
Query: 170 YCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTL--LEANHC-PGAALIHFRLQD 226
Y + TA L++ L P I+ E++ ++ TL + H P I +
Sbjct: 92 YATKFTAALLQAKLKEYPFRINITEIDITKKLNLGPFTLEFINLTHSIPEMNAIALHTEK 151
Query: 227 GQCYLHTGDFRASRLMQSYPLLVNHRVN------VLYL--DTTYCNPKYKFPSKEDVLNY 278
G +HTGD++ P+ R+ VL L D+T K K S+ D+
Sbjct: 152 G-IVVHTGDWKLDDNPIIGPVSNTQRLKELGDEGVLALVCDSTNIFTKNKSGSESDLEKS 210
Query: 279 VVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKI-YANASRRRVLQS 331
+ + KNC K V + A +I + + I+ LG K+ S R++Q+
Sbjct: 211 IFNIIKNC---NQKVAVSLFASNIARIYTIVNIATKLGRKVAILGKSLIRIIQA 261
>CGD|CAL0004348 [details] [associations]
symbol:PSO2 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 SMART:SM00849 CGD:CAL0004348
GO:GO:0016787 EMBL:AACQ01000059 EMBL:AACQ01000058 eggNOG:COG1236
RefSeq:XP_717085.1 RefSeq:XP_717164.1 ProteinModelPortal:Q5A5N8
GeneID:3641241 GeneID:3641328 KEGG:cal:CaO19.12822
KEGG:cal:CaO19.5362 Uniprot:Q5A5N8
Length = 537
Score = 124 (48.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 47/155 (30%), Positives = 72/155 (46%)
Query: 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL 184
+ PG VD F G+ + Y LTH H DH GL G +YCS LT + +
Sbjct: 13 EFPGV--VVDKFS-GTAE---VYLLTHCHQDHLQGLLNSSFCGRVYCSALTKSTLELDTR 66
Query: 185 VN--PSYIHPLELNTEHVID---G-VKVTLLEANHCPGAALIHFRLQDGQC--YLHTGDF 236
+ E N +D G V +T++ + HCPG+A+ L + C L TGD
Sbjct: 67 YTRVSRFFKAKEYNETFTVDILLGKVSITMIPSYHCPGSAMF---LLESFCKNVLITGDV 123
Query: 237 RASR-----LMQS---YPLLVNHR-VNVLYLDTTY 262
RA L+++ +P + + ++ +YLDTT+
Sbjct: 124 RAESWWTLSLIKNPHLFPYITGLKTLDQIYLDTTF 158
Score = 37 (18.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 413 YSEHSSFTELREFV 426
+S HSS+ E R V
Sbjct: 323 FSRHSSYQESRNLV 336
>UNIPROTKB|Q5A5N8 [details] [associations]
symbol:PSO2 "Putative uncharacterized protein PSO2"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 SMART:SM00849 CGD:CAL0004348
GO:GO:0016787 EMBL:AACQ01000059 EMBL:AACQ01000058 eggNOG:COG1236
RefSeq:XP_717085.1 RefSeq:XP_717164.1 ProteinModelPortal:Q5A5N8
GeneID:3641241 GeneID:3641328 KEGG:cal:CaO19.12822
KEGG:cal:CaO19.5362 Uniprot:Q5A5N8
Length = 537
Score = 124 (48.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 47/155 (30%), Positives = 72/155 (46%)
Query: 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL 184
+ PG VD F G+ + Y LTH H DH GL G +YCS LT + +
Sbjct: 13 EFPGV--VVDKFS-GTAE---VYLLTHCHQDHLQGLLNSSFCGRVYCSALTKSTLELDTR 66
Query: 185 VN--PSYIHPLELNTEHVID---G-VKVTLLEANHCPGAALIHFRLQDGQC--YLHTGDF 236
+ E N +D G V +T++ + HCPG+A+ L + C L TGD
Sbjct: 67 YTRVSRFFKAKEYNETFTVDILLGKVSITMIPSYHCPGSAMF---LLESFCKNVLITGDV 123
Query: 237 RASR-----LMQS---YPLLVNHR-VNVLYLDTTY 262
RA L+++ +P + + ++ +YLDTT+
Sbjct: 124 RAESWWTLSLIKNPHLFPYITGLKTLDQIYLDTTF 158
Score = 37 (18.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 413 YSEHSSFTELREFV 426
+S HSS+ E R V
Sbjct: 323 FSRHSSYQESRNLV 336
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 428 406 0.00078 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 620 (66 KB)
Total size of DFA: 285 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.74u 0.11s 31.85t Elapsed: 00:00:01
Total cpu time: 31.75u 0.11s 31.86t Elapsed: 00:00:01
Start: Fri May 10 09:27:05 2013 End: Fri May 10 09:27:06 2013