BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014242
(428 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255543475|ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223547811|gb|EEF49303.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 493
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 300/454 (66%), Positives = 352/454 (77%), Gaps = 37/454 (8%)
Query: 8 EFEYGDCESSGLLHDENGFPSFQDNDDDDDDDEEEE--------------EKEESFADDF 53
E YG+ +S+ +E F D +DDDE+E E+EESFA DF
Sbjct: 11 EANYGNGDSND---NEWSLFMFDDEQLIEDDDEKENYEIETKDKETDDEEEEEESFAADF 67
Query: 54 YRCGTDWSCLL---------QTERKLKQANLFDMWGLKSNS-ESEANCLFSP---PMKKL 100
YRCG+DWS LL E+KLKQANL D+WGLK+N+ + +A L S P KKL
Sbjct: 68 YRCGSDWSSLLLDRGDTNNNNIEKKLKQANLLDVWGLKNNNPKPKALPLTSSSPSPFKKL 127
Query: 101 KASNG-----KSTATHL--KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFH 153
K + K +L K I R CPFYKKIPGTPFTVDAFRYG I+ CSAYFLTHFH
Sbjct: 128 KIGSSSSSSIKPNYKNLIPKSIKPRVCPFYKKIPGTPFTVDAFRYGPIQNCSAYFLTHFH 187
Query: 154 YDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANH 213
DHYGGL K WSHGPIYC+ LTARL+++CL VN S+IHPL+LNTE+ I+GV+VTLLEANH
Sbjct: 188 ADHYGGLTKGWSHGPIYCTQLTARLLKLCLYVNSSFIHPLDLNTEYAIEGVRVTLLEANH 247
Query: 214 CPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKE 273
CPGAAL+HFRL +G CYLHTGDFRAS++MQSY LLVN +VN LYLDTTYCNPKYKFPSKE
Sbjct: 248 CPGAALLHFRLSNGLCYLHTGDFRASKVMQSYHLLVNQKVNALYLDTTYCNPKYKFPSKE 307
Query: 274 DVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFD 333
DVLNYVVR+TK+ LK+QP+TL+VVGAYSIGKE V+L+ISKALGVKIYA+ASRR++L+SF
Sbjct: 308 DVLNYVVRVTKDFLKQQPETLIVVGAYSIGKECVYLSISKALGVKIYASASRRQILESFG 367
Query: 334 WPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGN 393
W +LS +LCTQ DT LHVLP+SSL+ ETLKDYLK Y NQY AVLAFRPTGWTYSE VG
Sbjct: 368 WSDLSRSLCTQPKDTPLHVLPISSLRVETLKDYLKKYINQYRAVLAFRPTGWTYSENVGK 427
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+LDLIRP+S+GN+TIYGVPYSEHSSFTEL+EFV+
Sbjct: 428 KLDLIRPISKGNVTIYGVPYSEHSSFTELKEFVE 461
>gi|356560410|ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
Length = 505
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 287/450 (63%), Positives = 329/450 (73%), Gaps = 50/450 (11%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDW------------SCLLQ-TER 68
D+ GFPS + ++ SFA DFYR GTDW S L Q + +
Sbjct: 32 DDEGFPS-------QFPESGTASEKSSFAADFYRSGTDWSSLLLSLEDSKQSDLAQDSGK 84
Query: 69 KLKQANLFDMWGLKSNS---------------------------ESEANCLFSPPMKKL- 100
K+KQANLF +WG K N + E C P K
Sbjct: 85 KMKQANLFQIWGFKRNDAIGSVESGPSKSGCCDDGGGSSERKIVKPENRCSIFPDTGKEF 144
Query: 101 --KASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYG 158
S+ K + + V RSCPFYKK+PGT FTVDAFRYG ++GCSAYFLTHFH DHYG
Sbjct: 145 ENAKSSRKRKGSCGENRVTRSCPFYKKMPGTMFTVDAFRYGCVEGCSAYFLTHFHCDHYG 204
Query: 159 GLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAA 218
GL K+WSHGPIYCSPLT RLV+MCL VNP YIHPLE N EHVIDGVKVTLLEANHCPGAA
Sbjct: 205 GLSKKWSHGPIYCSPLTGRLVQMCLSVNPLYIHPLEFNEEHVIDGVKVTLLEANHCPGAA 264
Query: 219 LIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNY 278
LIHF L +GQ YLHTGDFRA +LMQ+Y LLVN RVNVLYLDTTYCNPKY+FPSKE+VLNY
Sbjct: 265 LIHFNLPNGQRYLHTGDFRACKLMQAYHLLVNQRVNVLYLDTTYCNPKYRFPSKEEVLNY 324
Query: 279 VVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELS 338
VV++TKN LK P+TLVVVGAYSIGKE V+LAISKALGVKIYANASRRR+LQ+F WP+LS
Sbjct: 325 VVKITKNHLKIHPRTLVVVGAYSIGKECVYLAISKALGVKIYANASRRRILQAFGWPDLS 384
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI 398
LCT GN+TLLHVLPMSSL+ ETLKDYLK Y Q+ A+LAFRPTGWT+SE + N L+LI
Sbjct: 385 DKLCTNGNNTLLHVLPMSSLRVETLKDYLKTYKEQFTAILAFRPTGWTFSEKISNDLELI 444
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFVQV 428
+P+S+GNITIYGVPYSEHSSF+EL++FVQV
Sbjct: 445 KPVSKGNITIYGVPYSEHSSFSELQDFVQV 474
>gi|357508501|ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
gi|87241310|gb|ABD33168.1| DNA repair metallo-beta-lactamase [Medicago truncatula]
gi|355499554|gb|AES80757.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
Length = 511
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 288/461 (62%), Positives = 332/461 (72%), Gaps = 39/461 (8%)
Query: 3 DAGLYEFEYGDCESSGLLHDENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSC 62
D Y D + D+ GFPS Q + + E+ SFA DFYRCG+D S
Sbjct: 22 DGDSYNVNDDDASFDAIRLDDEGFPSQQLPIESPSPNGSEKS---SFAADFYRCGSDCSS 78
Query: 63 LLQTER-------KLKQANLFDMWGLKSNSESEA-----------NCLFSPPMKKLKASN 104
LL ER KLKQANLF +WG K N E E+ S K +K N
Sbjct: 79 LLTPERDSLSSGKKLKQANLFQIWGFKRNVEFESPNQGGYCDVVGEGSVSSEKKSVKRGN 138
Query: 105 ------------------GKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSA 146
GK + H +K V RSCPFYKK+PGT FTVDAFRYG ++ CSA
Sbjct: 139 WGSILRDTGKVVENSKSTGKRKSFHGEKRVTRSCPFYKKMPGTNFTVDAFRYGCVEECSA 198
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKV 206
YFL+HFH DHYGGL K+WSHGPIYCSPLT RLV+MCL VNPSYI PLE +TE+VIDG+KV
Sbjct: 199 YFLSHFHADHYGGLSKKWSHGPIYCSPLTGRLVQMCLYVNPSYICPLEFDTEYVIDGIKV 258
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPK 266
TL++ANHCPGAALIHF L +GQCYLHTGDFRA +LMQ Y L VN RVNVLYLDTTYCNPK
Sbjct: 259 TLIDANHCPGAALIHFELPNGQCYLHTGDFRACKLMQDYHLFVNKRVNVLYLDTTYCNPK 318
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRR 326
YKFPSK+DVLNYVV++T N LKK P+TLVVVGAYSIGKE V+LAISKALGVKI+ NASRR
Sbjct: 319 YKFPSKDDVLNYVVKITNNHLKKYPRTLVVVGAYSIGKECVYLAISKALGVKIHVNASRR 378
Query: 327 RVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWT 386
R+L ++D P+ S LCT GN+TLLHVLPMSSL+ ETLK+YLK Y Q+ +VLAFRPTGWT
Sbjct: 379 RILLAYDCPDYSDRLCTNGNNTLLHVLPMSSLRIETLKEYLKTYKEQFTSVLAFRPTGWT 438
Query: 387 YSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+SE +GN L LI+P+S GNIT YGVPYSEHSSFTELR+FVQ
Sbjct: 439 FSEKIGNDLALIKPVSNGNITTYGVPYSEHSSFTELRDFVQ 479
>gi|297814896|ref|XP_002875331.1| hypothetical protein ARALYDRAFT_484438 [Arabidopsis lyrata subsp.
lyrata]
gi|297321169|gb|EFH51590.1| hypothetical protein ARALYDRAFT_484438 [Arabidopsis lyrata subsp.
lyrata]
Length = 483
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 281/444 (63%), Positives = 336/444 (75%), Gaps = 38/444 (8%)
Query: 22 DENGFPS-FQDNDDDDD-------DDEEEEEKEESFADDFYRCGTDWSCLLQTE------ 67
DE+ F S F D ++++ DD E E+EE FA DFY+ G+DWSCL++ E
Sbjct: 8 DEDWFGSRFNDGVNEEEEEGFVFYDDVGENEEEEGFASDFYKAGSDWSCLVEDEETVCSS 67
Query: 68 ---RKLKQANLFDMWGLKSNS-----ESEANCLF--------SPPMKKLKASNGKSTATH 111
+K+KQANLF +WGL+ NS + + LF SP S+ K+T+
Sbjct: 68 EKNKKMKQANLFQIWGLQENSPDTTKKMKQTDLFQSWGLQKPSPFTSPASNSSKKTTSAL 127
Query: 112 LKKIVD--------RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR 163
K+ D R CPFYKK+PGTPFTVDAFRYG ++GCSAYFLTHFH DHY GL K
Sbjct: 128 GKRRRDSSFGNDSPRPCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKA 187
Query: 164 WSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR 223
WSHGPIYCS LT+RL+R+ L V+PS+IHPLEL+ E+ I+G+KVTL+EANHCPGAALIHFR
Sbjct: 188 WSHGPIYCSSLTSRLLRLSLSVDPSFIHPLELDVEYTINGIKVTLIEANHCPGAALIHFR 247
Query: 224 LQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
L DG CYLHTGDFRAS+ MQ++PLL N RV+VLYLDTTYCNP+YKFPSKEDVL+YVVR+T
Sbjct: 248 LLDGTCYLHTGDFRASKKMQTHPLLFNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRIT 307
Query: 284 KNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCT 343
K+ L+KQPKTL+VVG+YSIGKE V+LAI+KALGVKI+ANASRRR+LQSF W ++S NL T
Sbjct: 308 KDFLRKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLST 367
Query: 344 QGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSR 403
G T LHVLPMSSLK E L ++LK Y QY AVLAFRPTGWTYSE +G LDLI+P +
Sbjct: 368 DGKATCLHVLPMSSLKVERLDEHLKVYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTCK 427
Query: 404 GNITIYGVPYSEHSSFTELREFVQ 427
G ITIYGVPYSEHSSFTELREFVQ
Sbjct: 428 GKITIYGVPYSEHSSFTELREFVQ 451
>gi|224131352|ref|XP_002321063.1| predicted protein [Populus trichocarpa]
gi|222861836|gb|EEE99378.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/325 (79%), Positives = 290/325 (89%)
Query: 103 SNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK 162
S GK+ ++ K R+CPFYK+IP T F+VDAFRYG I GCSAYFLTHFHYDHYGGL K
Sbjct: 26 SQGKAASSSPKHNRPRACPFYKRIPDTGFSVDAFRYGPIPGCSAYFLTHFHYDHYGGLTK 85
Query: 163 RWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHF 222
WSHGPIYC+PLTARL+ +CL +N YIHPLEL+TE+VI GVKVTLLEANHCPGAAL+HF
Sbjct: 86 GWSHGPIYCTPLTARLLTICLSLNSLYIHPLELDTEYVIQGVKVTLLEANHCPGAALLHF 145
Query: 223 RLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL 282
RL G CYLHTGDFRAS+LMQ++PLL N+RVNVLYLDTTYCNPKYKFPSKEDVL+YVVR+
Sbjct: 146 RLPTGLCYLHTGDFRASKLMQAHPLLANNRVNVLYLDTTYCNPKYKFPSKEDVLSYVVRV 205
Query: 283 TKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLC 342
TK+ LKKQPKTLVVVGAYSIGKESV+LAISKALGVKIYAN SRRR+LQSF WP+LS NLC
Sbjct: 206 TKSSLKKQPKTLVVVGAYSIGKESVYLAISKALGVKIYANNSRRRILQSFGWPDLSTNLC 265
Query: 343 TQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS 402
T+ DT LHVLP+SSL++ETLKDYLK + NQYAAVLAFRPTGWTYSE +G +LDLIRP +
Sbjct: 266 TKAIDTCLHVLPISSLRYETLKDYLKNHVNQYAAVLAFRPTGWTYSEGLGRELDLIRPST 325
Query: 403 RGNITIYGVPYSEHSSFTELREFVQ 427
RGNITIYGVPYSEHSSFTELR+FV+
Sbjct: 326 RGNITIYGVPYSEHSSFTELRDFVE 350
>gi|15231597|ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|30688447|ref|NP_850635.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|79313637|ref|NP_001030773.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|73621911|sp|Q38961.1|SNM1_ARATH RecName: Full=DNA cross-link repair protein SNM1; Short=AtSNM1
gi|1402886|emb|CAA66817.1| hypothetical protein [Arabidopsis thaliana]
gi|11994302|dbj|BAB01732.1| unnamed protein product [Arabidopsis thaliana]
gi|26449933|dbj|BAC42087.1| unknown protein [Arabidopsis thaliana]
gi|28827378|gb|AAO50533.1| unknown protein [Arabidopsis thaliana]
gi|332643675|gb|AEE77196.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|332643676|gb|AEE77197.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|332643677|gb|AEE77198.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
Length = 484
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 278/419 (66%), Positives = 326/419 (77%), Gaps = 28/419 (6%)
Query: 37 DDDEEEEEKEESFADDFYRCGTDWSCLLQTE-------RKLKQANLFDMWGLKSNS---- 85
+DD EE E+EE FA DFY+ G+DWSCL++ E +K+KQ+NLF +WGL+ NS
Sbjct: 34 NDDVEENEEEEGFASDFYKAGSDWSCLVEDEETVSSSVKKMKQSNLFQIWGLQENSPDTT 93
Query: 86 -ESEANCLF--------SPPMKKLKASNGKSTATHLKKIVD--------RSCPFYKKIPG 128
+ + LF SP S K+T+ K+ D R CPFYKK+PG
Sbjct: 94 KKMKQTDLFQSWGLQKPSPFTSPASNSAKKTTSALGKRRRDSSFSNDSPRPCPFYKKLPG 153
Query: 129 TPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPS 188
TPFTVDAFRYG ++GCSAYFLTHFH DHY GL K WSHGPIYCS LT+RL+R+ L VNPS
Sbjct: 154 TPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLLRLSLSVNPS 213
Query: 189 YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLL 248
IHPLEL+ E+ I+G+KVTL+EANHCPGAALIHFRL DG CYLHTGDFRAS+ MQ++PLL
Sbjct: 214 SIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRASKQMQTHPLL 273
Query: 249 VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVF 308
N RV+VLYLDTTYCNP+YKFPSKEDVL+YVVR+TK+ L+KQPKTL+VVG+YSIGKE V+
Sbjct: 274 FNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGKECVY 333
Query: 309 LAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLK 368
LAI+KALGVKI+ANASRRR+LQSF W ++S NL T G T LHVLPMSSLK E L ++LK
Sbjct: 334 LAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKATCLHVLPMSSLKVERLDEHLK 393
Query: 369 PYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
Y QY AVLAFRPTGWTYSE +G LDLI+P SRG ITIYGVPYSEHSSFTELREFVQ
Sbjct: 394 IYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQ 452
>gi|222423539|dbj|BAH19739.1| AT3G26680 [Arabidopsis thaliana]
Length = 484
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 278/419 (66%), Positives = 325/419 (77%), Gaps = 28/419 (6%)
Query: 37 DDDEEEEEKEESFADDFYRCGTDWSCLLQTE-------RKLKQANLFDMWGLKSNS---- 85
+DD EE E+EE FA DFY+ G+DWSCL++ E +K+KQ+NLF +WGL+ NS
Sbjct: 34 NDDVEENEEEEGFASDFYKAGSDWSCLVEDEETVSSSVKKMKQSNLFQIWGLQENSPDTT 93
Query: 86 -ESEANCLF--------SPPMKKLKASNGKSTATHLKKIVD--------RSCPFYKKIPG 128
+ + LF SP S K+T+ K+ D R CPFYKK+PG
Sbjct: 94 KKMKQTDLFQSWGLQKPSPFTSPASNSAKKTTSALGKRRRDSSFSNDSPRPCPFYKKLPG 153
Query: 129 TPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPS 188
TPFTVDAFRYG ++GCSAYFLTHFH DHY GL K WSHGPIYCS LT+RL+R+ L VNPS
Sbjct: 154 TPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLLRLSLSVNPS 213
Query: 189 YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLL 248
IHPLEL+ E+ I+G+KVTL+EANHCPGAALIHFRL DG CYLHTGDFRAS+ MQ++PLL
Sbjct: 214 SIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRASKQMQTHPLL 273
Query: 249 VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVF 308
N RV VLYLDTTYCNP+YKFPSKEDVL+YVVR+TK+ L+KQPKTL+VVG+YSIGKE V+
Sbjct: 274 FNQRVRVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGKECVY 333
Query: 309 LAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLK 368
LAI+KALGVKI+ANASRRR+LQSF W ++S NL T G T LHVLPMSSLK E L ++LK
Sbjct: 334 LAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKATCLHVLPMSSLKVERLDEHLK 393
Query: 369 PYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
Y QY AVLAFRPTGWTYSE +G LDLI+P SRG ITIYGVPYSEHSSFTELREFVQ
Sbjct: 394 IYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQ 452
>gi|1495267|emb|CAA66406.1| orf12 [Arabidopsis thaliana]
Length = 484
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 278/419 (66%), Positives = 326/419 (77%), Gaps = 28/419 (6%)
Query: 37 DDDEEEEEKEESFADDFYRCGTDWSCLLQTE-------RKLKQANLFDMWGLKSNS---- 85
+DD EE E+EE FA DFY+ G+DWSCL++ E +K+KQ+NLF +WGL+ NS
Sbjct: 34 NDDVEENEEEEGFASDFYKAGSDWSCLVEDEETVSSSVKKMKQSNLFQIWGLQENSPDTT 93
Query: 86 -ESEANCLF--------SPPMKKLKASNGKSTATHLKKIVD--------RSCPFYKKIPG 128
+ + LF SP S K+T+ K+ D R CPFYKK+PG
Sbjct: 94 KKMKQTDLFQSWGLQKPSPFTSPASNSAKKTTSALGKRRRDSSFSNDSPRPCPFYKKLPG 153
Query: 129 TPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPS 188
TPFTVDAFRYG ++GCSAYFLTHFH DHY GL K WSHGPIYCS LT+RL+R+ L VNPS
Sbjct: 154 TPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLLRLSLSVNPS 213
Query: 189 YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLL 248
IHPLEL+ E+ I+G+KVTL+EANHCPGAALIHFRL DG CYLHTGDFRAS+ MQ++PLL
Sbjct: 214 SIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRASKQMQTHPLL 273
Query: 249 VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVF 308
N RV+VLYLDTTYCNP+YKFPSKEDVL+YVVR+TK+ L+KQPKTL+VVG+YSIGKE V+
Sbjct: 274 FNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGKECVY 333
Query: 309 LAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLK 368
LAI+KALGVKI+ANASRRR+LQSF W ++S NL T G T LHVLPMSSLK E L ++LK
Sbjct: 334 LAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKATCLHVLPMSSLKVERLDEHLK 393
Query: 369 PYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
Y QY AVLAFRPTGWTYSE +G LDLI+P SRG ITIYGVPYSEHSSFTELREFVQ
Sbjct: 394 IYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQ 452
>gi|222628797|gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japonica Group]
Length = 517
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/435 (57%), Positives = 301/435 (69%), Gaps = 41/435 (9%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSCLL---------------QT 66
D+NGFP SFADDFYR GTDWS LL ++
Sbjct: 24 DDNGFPLPSSP--------TAATAATSFADDFYRSGTDWSSLLAAPSPPPSSEESGKNKS 75
Query: 67 ERKLKQANLFDMWGLKSNSESEANCLFSP---------------PMKKLKASNGKSTATH 111
L Q +LF WG+ E P +K + A
Sbjct: 76 GDSLVQRSLFQAWGIDRRPRREEEVAGVAGGAGAGASSAPSGSWPGRKRRRGGEVEAAAD 135
Query: 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYC 171
K + +CPFYKKIPGTPFTVDAFRYG+++GC+AYFL+HFH+DHYGGL K+W HGPIYC
Sbjct: 136 RKPL---ACPFYKKIPGTPFTVDAFRYGAVEGCNAYFLSHFHHDHYGGLTKKWCHGPIYC 192
Query: 172 SPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYL 231
+ LTARLV+MCL VNP YI PLEL+ E+VI+GV VTLLEANHCPGAALIHFRL DG+ YL
Sbjct: 193 TALTARLVKMCLSVNPEYICPLELDKEYVIEGVSVTLLEANHCPGAALIHFRLGDGKKYL 252
Query: 232 HTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
HTGDFRAS+ MQ YPLL ++N+LYLDTTYCNPKYKFP KEDV+++ VR K L+K+P
Sbjct: 253 HTGDFRASKSMQLYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEP 312
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
KTL+VVGAYSIGKE+V+LAISKAL V IY +ASRRR+L +F W +LS +C+ + LH
Sbjct: 313 KTLIVVGAYSIGKENVYLAISKALQVPIYTDASRRRILHAFGWSDLSKMICSDSQSSSLH 372
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV 411
VLP+SSL+ E L+ YL+ ++ AVLAFRPTGWT+SE GNQLDLI+P SRG ITIYGV
Sbjct: 373 VLPLSSLRHENLQKYLETLKQRFLAVLAFRPTGWTFSEETGNQLDLIKPSSRGKITIYGV 432
Query: 412 PYSEHSSFTELREFV 426
PYSEHSSF+ELREFV
Sbjct: 433 PYSEHSSFSELREFV 447
>gi|56798256|dbj|BAD82911.1| Snm1 [Oryza sativa Japonica Group]
Length = 485
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/435 (57%), Positives = 301/435 (69%), Gaps = 41/435 (9%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSCLL---------------QT 66
D+NGFP SFADDFYR GTDWS LL ++
Sbjct: 24 DDNGFPLPSSP--------TAATAATSFADDFYRSGTDWSSLLAAPSPPPSSEESGKNKS 75
Query: 67 ERKLKQANLFDMWGLKSNSESEANCLFSP---------------PMKKLKASNGKSTATH 111
L Q +LF WG+ E P +K + A
Sbjct: 76 GDSLVQRSLFQAWGIDRRPRREEEVAGVAGGAGAGASSAPSGSWPGRKRRRGGEVEAAAD 135
Query: 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYC 171
K + +CPFYKKIPGTPFTVDAFRYG+++GC+AYFL+HFH+DHYGGL K+W HGPIYC
Sbjct: 136 RKPL---ACPFYKKIPGTPFTVDAFRYGAVEGCNAYFLSHFHHDHYGGLTKKWCHGPIYC 192
Query: 172 SPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYL 231
+ LTARLV+MCL VNP YI PLEL+ E+VI+GV VTLLEANHCPGAALIHFRL DG+ YL
Sbjct: 193 TALTARLVKMCLSVNPEYICPLELDKEYVIEGVSVTLLEANHCPGAALIHFRLGDGKKYL 252
Query: 232 HTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
HTGDFRAS+ MQ YPLL ++N+LYLDTTYCNPKYKFP KEDV+++ VR K L+K+P
Sbjct: 253 HTGDFRASKSMQLYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEP 312
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
KTL+VVGAYSIGKE+V+LAISKAL V IY +ASRRR+L +F W +LS +C+ + LH
Sbjct: 313 KTLIVVGAYSIGKENVYLAISKALQVPIYTDASRRRILHAFGWSDLSKMICSDSQSSSLH 372
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV 411
VLP+SSL+ E L+ YL+ ++ AVLAFRPTGWT+SE GNQLDLI+P SRG ITIYGV
Sbjct: 373 VLPLSSLRHENLQKYLETLKQRFLAVLAFRPTGWTFSEETGNQLDLIKPSSRGKITIYGV 432
Query: 412 PYSEHSSFTELREFV 426
PYSEHSSF+ELREFV
Sbjct: 433 PYSEHSSFSELREFV 447
>gi|357167428|ref|XP_003581158.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-link repair protein
SNM1-like [Brachypodium distachyon]
Length = 512
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/437 (57%), Positives = 303/437 (69%), Gaps = 42/437 (9%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSCL-LQ------------TER 68
D+NGFP SFADDFYR G DWS L LQ T+
Sbjct: 22 DDNGFPILPPT----------AAATSSFADDFYRSGIDWSSLQLQAAPPHQRNPAAGTKA 71
Query: 69 K----LKQANLFDMWGLKSNSESEANCLFSPPMK--------------KLKASNGKSTAT 110
K L Q +LF WG++ EA + + G S
Sbjct: 72 KCGGPLVQRSLFQAWGIEKPPREEAAQGVRAAAGVSSSSASHSGTWSGRKRRWGGDSEEN 131
Query: 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIY 170
+ K +CPFYKKIPGTPFTVDAFRYG+++GCSAYFL+HFHYDHYGGL K+W HGPIY
Sbjct: 132 GVAK-KPATCPFYKKIPGTPFTVDAFRYGAVEGCSAYFLSHFHYDHYGGLTKKWCHGPIY 190
Query: 171 CSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY 230
C+ LTARLV+M L +N YI PLELNTE+VIDGV VTLLEANHCPGAALIHFRL DG+ Y
Sbjct: 191 CTALTARLVKMLLSINSEYICPLELNTEYVIDGVTVTLLEANHCPGAALIHFRLSDGKTY 250
Query: 231 LHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
LHTGDFRAS+ MQS+PLL R+N+LYLDTTYCNPKYKFP +EDV+++VVR + LKKQ
Sbjct: 251 LHTGDFRASKSMQSHPLLQTGRINLLYLDTTYCNPKYKFPPQEDVIDFVVRTAQRYLKKQ 310
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
PKTL+VVGAYSIGKE+V+LAIS+AL V IY +ASRRR+L SF WP+LS + + + L
Sbjct: 311 PKTLIVVGAYSIGKENVYLAISQALEVPIYTDASRRRILHSFGWPDLSKRISSCDQSSPL 370
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYG 410
HV+P++S++ E L YL+ ++ AVLAFRPTGWT+SE G +LDLI+P SRG +TIYG
Sbjct: 371 HVMPLASVQHEKLTKYLETLNQRFLAVLAFRPTGWTFSEAAGKELDLIKPSSRGRVTIYG 430
Query: 411 VPYSEHSSFTELREFVQ 427
VPYSEHSSFTELR+F++
Sbjct: 431 VPYSEHSSFTELRDFLK 447
>gi|115458180|ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group]
gi|38345210|emb|CAD40784.2| OSJNBb0012E08.8 [Oryza sativa Japonica Group]
gi|113564261|dbj|BAF14604.1| Os04g0401800 [Oryza sativa Japonica Group]
gi|116309317|emb|CAH66404.1| OSIGBa0155K12.7 [Oryza sativa Indica Group]
Length = 481
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/435 (57%), Positives = 301/435 (69%), Gaps = 41/435 (9%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSCLL---------------QT 66
D+NGFP SFADDFYR GTDWS LL ++
Sbjct: 24 DDNGFPLPSSP--------TAATAATSFADDFYRSGTDWSSLLAAPSPPPSSEESGKNKS 75
Query: 67 ERKLKQANLFDMWGLKSNSESEANCLFSP---------------PMKKLKASNGKSTATH 111
L Q +LF WG+ E P +K + A
Sbjct: 76 GDSLVQRSLFQAWGIDRRPRREEEVAGVAGGAGAGASSAPSGSWPGRKRRRGGEVEAAAD 135
Query: 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYC 171
K + +CPFYKKIPGTPFTVDAFRYG+++GC+AYFL+HFH+DHYGGL K+W HGPIYC
Sbjct: 136 RKPL---ACPFYKKIPGTPFTVDAFRYGAVEGCNAYFLSHFHHDHYGGLTKKWCHGPIYC 192
Query: 172 SPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYL 231
+ LTARLV+MCL VNP YI PLEL+ E+VI+GV VTLLEANHCPGAALIHFRL DG+ YL
Sbjct: 193 TALTARLVKMCLSVNPEYICPLELDKEYVIEGVSVTLLEANHCPGAALIHFRLGDGKKYL 252
Query: 232 HTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
HTGDFRAS+ MQ YPLL ++N+LYLDTTYCNPKYKFP KEDV+++ VR K L+K+P
Sbjct: 253 HTGDFRASKSMQLYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEP 312
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
KTL+VVGAYSIGKE+V+LAISKAL V IY +ASRRR+L +F W +LS +C+ + LH
Sbjct: 313 KTLIVVGAYSIGKENVYLAISKALQVPIYTDASRRRILHAFGWSDLSKMICSDSQSSSLH 372
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV 411
VLP+SSL+ E L+ YL+ ++ AVLAFRPTGWT+SE GNQLDLI+P SRG ITIYGV
Sbjct: 373 VLPLSSLRHENLQKYLETLKQRFLAVLAFRPTGWTFSEETGNQLDLIKPSSRGKITIYGV 432
Query: 412 PYSEHSSFTELREFV 426
PYSEHSSF+ELREFV
Sbjct: 433 PYSEHSSFSELREFV 447
>gi|413918214|gb|AFW58146.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
gi|413918215|gb|AFW58147.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
Length = 505
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/454 (55%), Positives = 307/454 (67%), Gaps = 58/454 (12%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSCL-----LQTERKLK----- 71
D+NGFP+ + FA+DFYR GTDWS L L R+
Sbjct: 27 DDNGFPALPSS---------PAACSSGFAEDFYRSGTDWSSLRAPPPLGPPRRAPGVKER 77
Query: 72 ------QANLFDMWGLK---------SNSESEANCLFS------PPMKKLKASNG----- 105
Q++LF WG++ +S LF P + L A +
Sbjct: 78 GGGSAVQSSLFQAWGIEKPRRDGRGAGDSSLVQRSLFQAWGIERPQREGLGAGDSSPSSS 137
Query: 106 ----------KSTATHLKKIVDR---SCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHF 152
+ +T +++ + +CPFYKKIPGTPFTVDAFRYG ++GCSAYFL+HF
Sbjct: 138 LSGSLLARKRRRGSTEEERVAAKKPLACPFYKKIPGTPFTVDAFRYGQVEGCSAYFLSHF 197
Query: 153 HYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEAN 212
H+DHYGGL K+W HGPIYCS LTARLV+MCL VN YI PLEL+TE+VI+GV VTLLEAN
Sbjct: 198 HHDHYGGLTKKWCHGPIYCSALTARLVKMCLSVNSDYICPLELDTEYVIEGVTVTLLEAN 257
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSK 272
HCPGAALIHFRL DG+ LHTGDFRAS+ MQS+PLL RVN++YLDTTYCNPKYKFP +
Sbjct: 258 HCPGAALIHFRLSDGKTCLHTGDFRASKTMQSHPLLQRGRVNLVYLDTTYCNPKYKFPPQ 317
Query: 273 EDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
EDV+++VVR T+ LKKQPKTL+VVGAYSIGKE+V+LAIS+AL IY +ASRRR+L SF
Sbjct: 318 EDVIDFVVRTTRRYLKKQPKTLIVVGAYSIGKENVYLAISQALEAHIYTDASRRRILYSF 377
Query: 333 DWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG 392
WP+LS LC+ + LHVLP+ S+ E LK YL+ ++ AVLAFRPTGWT+SE G
Sbjct: 378 GWPDLSKRLCSCNQSSSLHVLPLGSINHENLKKYLETLNGRFLAVLAFRPTGWTFSEATG 437
Query: 393 NQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
LDLI+P S N+TIYGVPYSEHSSFTELR+FV
Sbjct: 438 KHLDLIKPSSNANVTIYGVPYSEHSSFTELRDFV 471
>gi|242075620|ref|XP_002447746.1| hypothetical protein SORBIDRAFT_06g014970 [Sorghum bicolor]
gi|241938929|gb|EES12074.1| hypothetical protein SORBIDRAFT_06g014970 [Sorghum bicolor]
Length = 496
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/453 (54%), Positives = 302/453 (66%), Gaps = 57/453 (12%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSCLLQTER------------- 68
D+NGFP D FA+DFY GTDWS L
Sbjct: 19 DDNGFP---------DLPCSPAASSSCFAEDFYSSGTDWSSLRAPPPLRPPGRAPGVKEK 69
Query: 69 -----KLKQANLFDMWGLK------SNSESEANCLFS------PPMKKLKASNG------ 105
L Q++L WG++ +S LF PP + L A +
Sbjct: 70 EMGGGSLVQSSLLQAWGIEKPRREAGDSSLVQRSLFQAWGIERPPREGLGAGHSSPSPSR 129
Query: 106 ---------KSTATHLKKIVDR---SCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFH 153
+ +T +++ + +CPFYKKIPGTPFTVDAFRYG ++GCSAYFL+HFH
Sbjct: 130 SGSWLGRKRRRGSTEEERVAPKKPLACPFYKKIPGTPFTVDAFRYGQVEGCSAYFLSHFH 189
Query: 154 YDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANH 213
+DHYGGL K+W HGPIYCS LTARLV+MCL VN YI+PLEL+T +VI+GV VTLLEANH
Sbjct: 190 HDHYGGLTKKWCHGPIYCSALTARLVKMCLSVNSDYIYPLELDTNYVIEGVTVTLLEANH 249
Query: 214 CPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKE 273
CPGAALIHF+L DG+ YLHTGDFRAS+ MQ +PLL RVN++YLDTTYCNPKYKFP +E
Sbjct: 250 CPGAALIHFQLSDGKTYLHTGDFRASKSMQLHPLLQRGRVNLVYLDTTYCNPKYKFPPQE 309
Query: 274 DVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFD 333
DV+++VVR + LKKQPKTL+VVGAYSIGKE+V+LAIS+AL V IY +ASRRR+L SF
Sbjct: 310 DVIDFVVRTAQRYLKKQPKTLIVVGAYSIGKENVYLAISQALEVPIYTDASRRRILHSFG 369
Query: 334 WPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGN 393
W +LS +C+ + LHVLP+ S+ E LK YL+ ++ AVLAFRPTGWT+SE G
Sbjct: 370 WSDLSKRICSCNQSSPLHVLPLGSVNHENLKKYLETLSGRFLAVLAFRPTGWTFSEATGK 429
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
LDLI+P G++TIYGVPYSEHSSFTELR+FV
Sbjct: 430 HLDLIKPSCNGSVTIYGVPYSEHSSFTELRDFV 462
>gi|218194787|gb|EEC77214.1| hypothetical protein OsI_15746 [Oryza sativa Indica Group]
Length = 418
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/437 (52%), Positives = 271/437 (62%), Gaps = 86/437 (19%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSCLL---------------QT 66
D+NGFP SFADDFYR GTDWS LL ++
Sbjct: 24 DDNGFPLPSSP--------TAATAATSFADDFYRSGTDWSSLLAAPSPPPSSEESGKNKS 75
Query: 67 ERKLKQANLFDMWGLKSNSESEANCLFSP---------------PMKKLKASNGKSTATH 111
L Q +LF WG+ E P +K + A
Sbjct: 76 GDSLVQRSLFQAWGIDRRPRREEEVAGVAGGAGAGASSAPSGSWPGRKRRRGGEVEAAAD 135
Query: 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYC 171
K + +CPFYKKIPGTPFTVDAFRYG+++GC+AYFL+HFH+DHYGGL K+W HGPIYC
Sbjct: 136 RKPL---ACPFYKKIPGTPFTVDAFRYGAVEGCNAYFLSHFHHDHYGGLTKKWCHGPIYC 192
Query: 172 SPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYL 231
+ LTARLV+MCL VNP YI PLEL+ E+VI+GV VTLLEANHCPGAALIHFRL DG+ YL
Sbjct: 193 TALTARLVKMCLSVNPEYICPLELDKEYVIEGVSVTLLEANHCPGAALIHFRLGDGKKYL 252
Query: 232 HTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
HTGDFRAS+ MQ YPLL ++N+LYLDTTYCNPKYKFP KEDV+++ VR K L+K+P
Sbjct: 253 HTGDFRASKSMQLYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEP 312
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
KTL+VVGAYSIGKE+V+LAISKAL
Sbjct: 313 KTLIVVGAYSIGKENVYLAISKAL------------------------------------ 336
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV 411
+ L+ YL+ ++ AVLAFRPTGWT+SE GNQLDLI+P SRG ITIYGV
Sbjct: 337 ---------QNLQKYLETLKQRFLAVLAFRPTGWTFSEETGNQLDLIKPSSRGKITIYGV 387
Query: 412 PYSEHSSFTELREFVQV 428
PYSEHSSF+ELREFV V
Sbjct: 388 PYSEHSSFSELREFVMV 404
>gi|168063695|ref|XP_001783805.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664687|gb|EDQ51397.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 334
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 177/302 (58%), Positives = 230/302 (76%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
+PGTPFTVDAF++G+++GC AYFLTHFH DHYGGL + WSHGPI+C+ +TARLV M L V
Sbjct: 1 MPGTPFTVDAFKFGAVEGCKAYFLTHFHSDHYGGLTRSWSHGPIFCTEITARLVSMHLGV 60
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSY 245
+ ++ P++L +++GVKV LEANHCPGAALI F+ GQ LHTGDFRA + MQ Y
Sbjct: 61 DSHWLRPMKLGCVSIVEGVKVQFLEANHCPGAALILFQTSCGQLILHTGDFRACKSMQDY 120
Query: 246 PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKE 305
P L+ R+ LYLDTTYCNPKY FP +EDV+N+VV+LT L + PKTLV VGAYSIGKE
Sbjct: 121 PELLGARITSLYLDTTYCNPKYNFPLQEDVINHVVKLTSAALSRNPKTLVTVGAYSIGKE 180
Query: 306 SVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKD 365
V+L I+KAL ++IYA+ R R L++ DWP+L+ LC+ + + LHVLP+S L L+
Sbjct: 181 RVYLGIAKALSLRIYADKRRVRTLRALDWPDLTDRLCSDASSSRLHVLPISHLNATKLRA 240
Query: 366 YLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREF 425
Y++ Y+AVLAFRPTGWTYSE +G+ L ++P G +TIYGVPYSEHSS++EL+EF
Sbjct: 241 YMQSLHPTYSAVLAFRPTGWTYSEKIGSNLSELKPQRSGVVTIYGVPYSEHSSYSELQEF 300
Query: 426 VQ 427
V+
Sbjct: 301 VK 302
>gi|326520423|dbj|BAK07470.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 434
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/399 (50%), Positives = 249/399 (62%), Gaps = 71/399 (17%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSCLL---------------QT 66
D+NGFP+ SFA DFYR G DWS L Q
Sbjct: 22 DDNGFPA----------SPPAAATTSSFAHDFYRSGIDWSSLQAPPSHRRRPVAGVTEQV 71
Query: 67 ERKLKQANLFDMWGLK--SNSESEANC-------LFS------PPM-------------- 97
L Q NLF WG++ + +E C LF PP
Sbjct: 72 CGPLVQKNLFQAWGIEKPAAGTTEKLCGQRVQKNLFQAWGIKKPPREEAAQGAPVGAGAG 131
Query: 98 --------------KKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKG 143
+K + K + +CPFYKKIPGTPFTVDAFRYG+++G
Sbjct: 132 ASSSSPSPSVAWSGRKRRWGGSDENGASRKPV---ACPFYKKIPGTPFTVDAFRYGAVEG 188
Query: 144 CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDG 203
C AYFL+HFH DHYGGL K+W HGPIYC+ +TARLV+M L ++ +Y+ PLEL+TE+VIDG
Sbjct: 189 CYAYFLSHFHNDHYGGLTKKWCHGPIYCTAITARLVKMLLSIDSAYVCPLELDTEYVIDG 248
Query: 204 VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYC 263
VKVT LEANHCPGAALIHFRL DG+ YLHTGDFRAS+ MQ +PLL R+++LYLDTTYC
Sbjct: 249 VKVTFLEANHCPGAALIHFRLSDGKTYLHTGDFRASKSMQLHPLLQTGRISLLYLDTTYC 308
Query: 264 NPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANA 323
NPKYKFP +EDV+++VVR + LKKQPKTL+VVGAYSIGKE+V+LAIS+AL V IY +A
Sbjct: 309 NPKYKFPPQEDVIDFVVRTAQRYLKKQPKTLIVVGAYSIGKENVYLAISQALEVPIYTDA 368
Query: 324 SRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFET 362
SRRR+L SF WP+LS + + + LHVLP++S++ E
Sbjct: 369 SRRRILHSFGWPDLSKRISSCNQSSPLHVLPLASVQHEV 407
>gi|212721348|ref|NP_001131576.1| uncharacterized protein LOC100192920 [Zea mays]
gi|194691900|gb|ACF80034.1| unknown [Zea mays]
Length = 280
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 169/246 (68%), Positives = 200/246 (81%)
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
MCL VN YI PLEL+TE+VI+GV VTLLEANHCPGAALIHFRL DG+ LHTGDFRAS+
Sbjct: 1 MCLSVNSDYICPLELDTEYVIEGVTVTLLEANHCPGAALIHFRLSDGKTCLHTGDFRASK 60
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
MQS+PLL RVN++YLDTTYCNPKYKFP +EDV+++VVR T+ LKKQPKTL+VVGAY
Sbjct: 61 TMQSHPLLQRGRVNLVYLDTTYCNPKYKFPPQEDVIDFVVRTTRRYLKKQPKTLIVVGAY 120
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF 360
SIGKE+V+LAIS+AL IY +ASRRR+L SF WP+LS LC+ + LHVLP+ S+
Sbjct: 121 SIGKENVYLAISQALEAHIYTDASRRRILYSFGWPDLSKRLCSCNQSSSLHVLPLGSINH 180
Query: 361 ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFT 420
E LK YL+ ++ AVLAFRPTGWT+SE G LDLI+P S N+TIYGVPYSEHSSFT
Sbjct: 181 ENLKKYLETLNGRFLAVLAFRPTGWTFSEATGKHLDLIKPSSNANVTIYGVPYSEHSSFT 240
Query: 421 ELREFV 426
ELR+FV
Sbjct: 241 ELRDFV 246
>gi|395502101|ref|XP_003755424.1| PREDICTED: DNA cross-link repair 1A protein [Sarcophilus harrisii]
Length = 1037
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 157/313 (50%), Positives = 227/313 (72%), Gaps = 2/313 (0%)
Query: 115 IVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPL 174
+ ++ CPFYKKIPGT FTVDAF+YG+I+GC+AYFLTHFH DHY GL K+++ P+YCS +
Sbjct: 692 LKEKKCPFYKKIPGTTFTVDAFQYGAIEGCTAYFLTHFHSDHYAGLSKKFTF-PVYCSKI 750
Query: 175 TARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTG 234
T+ LV+ L V Y+HPL ++T ++G+KV LL+ANHCPGA +I F L +G LHTG
Sbjct: 751 TSNLVKNKLCVQEQYLHPLPMDTVCTVNGIKVVLLDANHCPGAVMILFYLPNGTVTLHTG 810
Query: 235 DFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTL 294
DFRA+ M+ Y LL + +V+ LYLDTTYC+P+Y FPS+++V+ + + + + P+TL
Sbjct: 811 DFRANPSMERYSLLASQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINIAFETVTLSPRTL 870
Query: 295 VVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLP 354
VV G YSIGKE +FLAI+ LG K+ + + + LQ + E++ + T + L+H+LP
Sbjct: 871 VVCGTYSIGKEKIFLAIADVLGSKVSMSQEKYKTLQCLELQEVNSLITTDWSSALVHLLP 930
Query: 355 MSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYS 414
M + F+ L+++L YG +Y +LAFRPTGWT+SE G+ D++ P ++GNI+IYG+PYS
Sbjct: 931 MMQINFKGLQNHLNKYGGKYENILAFRPTGWTHSEKFGSLADIV-PQTKGNISIYGIPYS 989
Query: 415 EHSSFTELREFVQ 427
EHSS+ E++ FVQ
Sbjct: 990 EHSSYLEMKRFVQ 1002
>gi|327277472|ref|XP_003223488.1| PREDICTED: DNA cross-link repair 1A protein-like [Anolis
carolinensis]
Length = 967
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 219/310 (70%), Gaps = 2/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CPFYKKIPGT F VDAF+YG I+GC YFLTHFH DHYGGL K+++ PIYC+ +T
Sbjct: 623 KQCPFYKKIPGTSFVVDAFQYGEIEGCKGYFLTHFHSDHYGGLTKKFTF-PIYCNKITGN 681
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV+ L V YIH L +NTE +IDG+KV LL+ANHCPGAA+I F +G LHTGDFR
Sbjct: 682 LVKSKLRVLEEYIHILPMNTECIIDGIKVVLLDANHCPGAAMILFAFPNGTAILHTGDFR 741
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ YP L+ ++N LYLDTTYC+P+Y FPS+++++ + + P+TLVV
Sbjct: 742 AHPSMERYPFLIGRKINTLYLDTTYCSPEYTFPSQQEMIQFAANTAFEIVTLNPRTLVVC 801
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + E++ + N+TLLH+LPM
Sbjct: 802 GTYSIGKEKVFLAIANVLGSKVSMSQEKYKTLQCLESTEINSLITLDWNNTLLHLLPMMQ 861
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+++L + ++ +LAF+PTGWTYS+ + L+ I+P +RGNITIYG+PYSEHS
Sbjct: 862 INFKGLQNHLSKFSAKFDQILAFKPTGWTYSDQCYS-LNDIQPQTRGNITIYGIPYSEHS 920
Query: 418 SFTELREFVQ 427
SF E++ FVQ
Sbjct: 921 SFVEMKRFVQ 930
>gi|260828015|ref|XP_002608959.1| hypothetical protein BRAFLDRAFT_287105 [Branchiostoma floridae]
gi|229294313|gb|EEN64969.1| hypothetical protein BRAFLDRAFT_287105 [Branchiostoma floridae]
Length = 377
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 218/310 (70%), Gaps = 2/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CPFYKKIPGT F VDAFRYG+I GC+AYFL+HFHYDHY GL K + H IY S +T
Sbjct: 27 KQCPFYKKIPGTTFVVDAFRYGTIPGCTAYFLSHFHYDHYQGLSKHFRHA-IYSSKVTCN 85
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV+ + V Y+HPL LNT ++GV+VTLLEANHCPGA + F+L DG+ LHTGDFR
Sbjct: 86 LVKKKIRVADRYLHPLPLNTPCDVEGVQVTLLEANHCPGAVMFLFQLPDGKNLLHTGDFR 145
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ YP L +V+ LYLDTTYCNP Y FP++ +V+++ V + ++ PKTL+V
Sbjct: 146 ADTSMECYPALTGCKVHTLYLDTTYCNPAYSFPAQMEVIDFAVGVAVEAVQHNPKTLIVC 205
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G+Y+IGKE VF AI++ALG K+ A ++ L D ++ + G +T LHVLPM
Sbjct: 206 GSYTIGKERVFFAIAEALGCKVCATRDKKNTLDCLDSDQVKRLVTLNGRETRLHVLPMKD 265
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
LKF +LK YL+ Y QY +VLAF PTGWT++ +V + IRP GNIT+YG+PYSEHS
Sbjct: 266 LKFNSLKSYLEGYRPQYDSVLAFEPTGWTHNNSVSTVAN-IRPKRHGNITVYGIPYSEHS 324
Query: 418 SFTELREFVQ 427
S+TE++ FVQ
Sbjct: 325 SYTEMKRFVQ 334
>gi|344274721|ref|XP_003409163.1| PREDICTED: DNA cross-link repair 1A protein [Loxodonta africana]
Length = 1046
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 169/321 (52%), Positives = 226/321 (70%), Gaps = 6/321 (1%)
Query: 107 STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH 166
S A L+K RSCPFYKKIPGT FTVDAF+YGSI+ C+AYFLTHFH DHY GL K ++
Sbjct: 697 SNAGGLRK---RSCPFYKKIPGTGFTVDAFQYGSIEDCTAYFLTHFHSDHYAGLSKSFT- 752
Query: 167 GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQD 226
P+YCS +T L++ L V YIHPL ++TE +++GVKV LL+ANHCPGA ++ F L +
Sbjct: 753 SPVYCSEITGNLLKNKLHVQEQYIHPLPMDTECIVNGVKVVLLDANHCPGAVMVLFCLPN 812
Query: 227 GQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
G LHTGDFRA M+ LLVN RV+ LYLDTTYC+P+Y FPS+++V+ + +
Sbjct: 813 GTVILHTGDFRADPTMER-SLLVNWRVHTLYLDTTYCSPEYCFPSQQEVIQFAINTAFEA 871
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
+ P+ LVV G YSIGKE VFLAI+ LG K+ + + LQ + PE++ + T
Sbjct: 872 VTLNPRALVVCGTYSIGKEKVFLAIADVLGSKVGMSREKYTTLQCLNIPEINSLITTDMC 931
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNI 406
L+H+LPM + F+ L+ +LK YG +Y VLAF+PTGWT+S T+ + D+I P +RGNI
Sbjct: 932 SALVHLLPMMQINFKGLQKHLKKYGGKYDQVLAFQPTGWTHSNTLTSIADII-PQTRGNI 990
Query: 407 TIYGVPYSEHSSFTELREFVQ 427
+IYG+PYSEHSS+ E++ FVQ
Sbjct: 991 SIYGIPYSEHSSYLEMKRFVQ 1011
>gi|291404840|ref|XP_002718800.1| PREDICTED: DNA cross-link repair 1A isoform 2 [Oryctolagus
cuniculus]
Length = 1028
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 166/329 (50%), Positives = 232/329 (70%), Gaps = 4/329 (1%)
Query: 100 LKASNGK-STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYG 158
L+ N K S ++ +++ R+CPFYKKIPGT FTVDAF+YG I+GCSAYFLTHFH DHY
Sbjct: 668 LQRRNSKISESSDARELRKRTCPFYKKIPGTGFTVDAFQYGMIEGCSAYFLTHFHSDHYA 727
Query: 159 GLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAA 218
GL K S P+YC+ +T L++ L V YIH L ++TE V++GVKV LL+ANHCPGAA
Sbjct: 728 GLSKN-STFPVYCTEITGNLLKNKLHVQEQYIHTLPMDTECVVNGVKVVLLDANHCPGAA 786
Query: 219 LIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNY 278
+I F L +G LHTGDFRA+ M+ LL +V+VLYLDTTYC+P+Y FPS+++V+ +
Sbjct: 787 MILFHLPNGTVMLHTGDFRANPSMERS-LLAGQKVHVLYLDTTYCSPEYTFPSQQEVIQF 845
Query: 279 VVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELS 338
+ + P+ LVV G YSIGKE VFLAI+ LG K+ + + + L+ + PE++
Sbjct: 846 AINTAFEAVTLNPRALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEIN 905
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI 398
+ T ++L+H+LPM + F+ L+ +LK +G +Y +LAFRPTGWT+S+ + D+I
Sbjct: 906 SLITTDMCNSLVHLLPMMQINFKGLQSHLKKFGGKYDEILAFRPTGWTHSDKLTTMADVI 965
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFVQ 427
P ++GNI+IYG+PYSEHSSF E++ FVQ
Sbjct: 966 -PQTKGNISIYGIPYSEHSSFLEMKRFVQ 993
>gi|291404838|ref|XP_002718799.1| PREDICTED: DNA cross-link repair 1A isoform 1 [Oryctolagus cuniculus]
Length = 1043
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 166/329 (50%), Positives = 232/329 (70%), Gaps = 4/329 (1%)
Query: 100 LKASNGK-STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYG 158
L+ N K S ++ +++ R+CPFYKKIPGT FTVDAF+YG I+GCSAYFLTHFH DHY
Sbjct: 683 LQRRNSKISESSDARELRKRTCPFYKKIPGTGFTVDAFQYGMIEGCSAYFLTHFHSDHYA 742
Query: 159 GLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAA 218
GL K S P+YC+ +T L++ L V YIH L ++TE V++GVKV LL+ANHCPGAA
Sbjct: 743 GLSKN-STFPVYCTEITGNLLKNKLHVQEQYIHTLPMDTECVVNGVKVVLLDANHCPGAA 801
Query: 219 LIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNY 278
+I F L +G LHTGDFRA+ M+ LL +V+VLYLDTTYC+P+Y FPS+++V+ +
Sbjct: 802 MILFHLPNGTVMLHTGDFRANPSMERS-LLAGQKVHVLYLDTTYCSPEYTFPSQQEVIQF 860
Query: 279 VVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELS 338
+ + P+ LVV G YSIGKE VFLAI+ LG K+ + + + L+ + PE++
Sbjct: 861 AINTAFEAVTLNPRALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEIN 920
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI 398
+ T ++L+H+LPM + F+ L+ +LK +G +Y +LAFRPTGWT+S+ + D+I
Sbjct: 921 SLITTDMCNSLVHLLPMMQINFKGLQSHLKKFGGKYDEILAFRPTGWTHSDKLTTMADVI 980
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFVQ 427
P ++GNI+IYG+PYSEHSSF E++ FVQ
Sbjct: 981 -PQTKGNISIYGIPYSEHSSFLEMKRFVQ 1008
>gi|126273412|ref|XP_001377744.1| PREDICTED: DNA cross-link repair 1A protein [Monodelphis domestica]
Length = 1043
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 222/310 (71%), Gaps = 2/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CPFYKKIPGT FTVDAF+YG+I+GC+AYFLTHFH DHY GL K+++ P+YCS +T+
Sbjct: 701 KKCPFYKKIPGTGFTVDAFQYGAIEGCTAYFLTHFHSDHYAGLSKKFTF-PVYCSKITSN 759
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV+ L V Y+HPL ++T +++ +KV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 760 LVKSKLCVQEQYLHPLPMDTVCIVNDIKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 819
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ Y LL N +V+ LYLDTTYC+P+Y FPS+++V+ + + + + P+TLVV
Sbjct: 820 ADPSMERYSLLANQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINIAFESVTLAPRTLVVC 879
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G Y+IGKE VFLAI+ LG K+ + + + L+ + E++ + T N L+H+LPM
Sbjct: 880 GTYAIGKEKVFLAIADVLGSKVSMSQEKYKTLKCLELQEVNSLITTDWNSALVHLLPMMQ 939
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+++L G +Y +LAFRPTGWT+SE + D++ P ++GNI+IYG+PYSEHS
Sbjct: 940 INFKDLQNHLNKCGGKYDCILAFRPTGWTHSEKFDSITDIV-PQTKGNISIYGIPYSEHS 998
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 999 SYVEMKRFVQ 1008
>gi|296221247|ref|XP_002756651.1| PREDICTED: DNA cross-link repair 1A protein [Callithrix jacchus]
Length = 1046
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 162/319 (50%), Positives = 225/319 (70%), Gaps = 3/319 (0%)
Query: 109 ATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP 168
++++ ++ +SCPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P
Sbjct: 696 SSNVGELRKKSCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-P 754
Query: 169 IYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQ 228
+YCS +T L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G
Sbjct: 755 VYCSEITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFCLPNGT 814
Query: 229 CYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
LHTGDFRA M+ LL N V+VLYLDTTYC+P+Y FPS+++V+ + + +
Sbjct: 815 VILHTGDFRADPSMERS-LLANREVHVLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVT 873
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
P+ LVV G YSIGKE VFLAI+ LG K+ + + + LQ + P+++ + T +
Sbjct: 874 LNPRALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPDINSLITTDMCSS 933
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITI 408
L+H+LPM + F+ L+ +LK YG +Y +LAFRPTGWT+S D+I P ++GNI+I
Sbjct: 934 LVHLLPMMQINFKGLQSHLKKYGGKYDQILAFRPTGWTHSNKFTRIADVI-PQTKGNISI 992
Query: 409 YGVPYSEHSSFTELREFVQ 427
YG+PYSEHSSF E++ FVQ
Sbjct: 993 YGIPYSEHSSFLEMKRFVQ 1011
>gi|449276210|gb|EMC84861.1| DNA cross-link repair 1A protein [Columba livia]
Length = 992
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 218/310 (70%), Gaps = 2/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CPFYKKIPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K ++ PIYC+ +T
Sbjct: 648 KHCPFYKKIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYCGLTKNFAF-PIYCNKITGN 706
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV+ L V YIH L ++TE +++G+KV LL+ANHCPGA +I F L G LHTGDFR
Sbjct: 707 LVKAKLRVKEEYIHVLPMDTECIVNGIKVLLLDANHCPGATMILFCLPSGTVILHTGDFR 766
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ YP LV +V+ LYLDTTYC+P+Y FPS+++V+ + V + P+TLVV
Sbjct: 767 ADPSMERYPALVGQQVHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFETVTLNPRTLVVC 826
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI++ LG K + + + LQ + ++S + TLLHVLPM
Sbjct: 827 GTYSIGKEKVFLAIAEVLGSKASMSRDKYKTLQCLESADVSSLISVDWGGTLLHVLPMMQ 886
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F++L+D+L + + VLAF+PTGWTYS++ + +D I+P +RG ITIYG+PYSEHS
Sbjct: 887 INFKSLQDHLYKFSENFDQVLAFKPTGWTYSDSCLSLVD-IKPQTRGRITIYGIPYSEHS 945
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 946 SYLEMKRFVQ 955
>gi|320168273|gb|EFW45172.1| SNM1 [Capsaspora owczarzaki ATCC 30864]
Length = 864
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/309 (53%), Positives = 212/309 (68%), Gaps = 1/309 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R CPFYK++P T F VDAFR+G I GC+ YFLTHFH DHYGGL K W HGPIYCS TA
Sbjct: 513 RPCPFYKRMPDTTFVVDAFRFGRIAGCTGYFLTHFHSDHYGGLSKGWRHGPIYCSEATAN 572
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L L V +H L ++ E +DGV VTL++ANHCPG+ LI F L DG+ YLHTGDFR
Sbjct: 573 LAVHVLGVADDMLHRLPMDREVTVDGVGVTLIDANHCPGSCLIKFVLPDGRVYLHTGDFR 632
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M ++ L R +LYLDTTYC+P+Y FPS+++V+++ R+++ + + + LVVV
Sbjct: 633 ADPAMLAHQALAQCRFAMLYLDTTYCDPRYTFPSQQEVVSFCARISRAMVVRNSRLLVVV 692
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G Y IGKE VF +I+KALGVK + + R+LQ + ELS L N T LH+LP+ S
Sbjct: 693 GTYQIGKEKVFQSIAKALGVKAAVDPHKLRILQCLNNKELSDILTLDKNSTRLHILPLFS 752
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
L ++L+ YL + Y AVLAFRPTGWT+S + + D I+P GNI +YGVPYSEHS
Sbjct: 753 LSAKSLQAYLSNFRPHYNAVLAFRPTGWTFSSKLVSVAD-IQPQITGNICMYGVPYSEHS 811
Query: 418 SFTELREFV 426
SF+EL EFV
Sbjct: 812 SFSELGEFV 820
>gi|348578689|ref|XP_003475115.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-link repair 1A protein-like
[Cavia porcellus]
Length = 1053
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 232/330 (70%), Gaps = 4/330 (1%)
Query: 99 KLKASNGK-STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHY 157
+L+ N K S + + ++ R+CPFYKKIPGT FTVDAF+YG+I+GC+AYFLTHFH DHY
Sbjct: 692 RLQKDNVKVSESPNAGELRKRTCPFYKKIPGTGFTVDAFQYGAIEGCTAYFLTHFHSDHY 751
Query: 158 GGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGA 217
GL K ++ P+YCS +T L++ L V YIH L ++TE +++GVKV LL+ANHCPGA
Sbjct: 752 AGLSKNFTF-PVYCSEITGSLLKNKLHVQEQYIHTLPMDTECIVNGVKVILLDANHCPGA 810
Query: 218 ALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLN 277
A+I F L DG LHTGDFRA M+ + LL H+V+VLYLDTTYC+P+Y FPS+++V+
Sbjct: 811 AMILFCLPDGTVVLHTGDFRADPSME-HSLLSGHKVHVLYLDTTYCSPEYTFPSQQEVIQ 869
Query: 278 YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPEL 337
+ + + + P+ LVV G Y IGKE VFLAI+ LG K+ + + + L+ + E+
Sbjct: 870 FAINTAFETVTQNPRALVVCGTYCIGKEKVFLAIADVLGSKVGMSEEKYKTLRCLNISEI 929
Query: 338 SGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL 397
+ + T ++L+H+LPM + F+ L+ +LK YG +Y +LAFRPTGWT+S + D
Sbjct: 930 NSLITTDMYNSLVHLLPMMQINFKNLQSHLKKYGGEYNQILAFRPTGWTHSNKLTRIAD- 988
Query: 398 IRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ P ++GNI+IYG+PYSEHSS+ E++ FVQ
Sbjct: 989 VTPQTKGNISIYGIPYSEHSSYLEMKRFVQ 1018
>gi|194042051|ref|XP_001926894.1| PREDICTED: DNA cross-link repair 1A protein [Sus scrofa]
Length = 1058
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/330 (48%), Positives = 232/330 (70%), Gaps = 4/330 (1%)
Query: 99 KLKASNGKS-TATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHY 157
+L+ N K+ +++ K+ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY
Sbjct: 697 RLQRGNTKTPESSNAGKLRKRTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHY 756
Query: 158 GGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGA 217
GL K ++ P+YCS +T L++ L V YIHPL ++TE V++GVKV LL+ANHCPGA
Sbjct: 757 AGLSKNFTF-PVYCSEVTGNLLKSKLHVQEQYIHPLPIDTECVVNGVKVVLLDANHCPGA 815
Query: 218 ALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLN 277
++ F L +G LHTGDFRA M+ LL +V+ LYLDTTYC+P+Y FPS+++V+
Sbjct: 816 VMVLFHLPNGHVILHTGDFRADPTMERS-LLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQ 874
Query: 278 YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPEL 337
+ + + P TLVV G YSIGKE VFLAI+ LG K+ + + L+ + PE+
Sbjct: 875 FAINTAFEAVTLNPHTLVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYNTLRCLNIPEI 934
Query: 338 SGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL 397
+ + T ++L+H+LPM + F+ L+++LK +G +Y +LAFRPTGWT+S + + D+
Sbjct: 935 NSFITTDMCNSLVHLLPMMQINFKGLQNHLKKFGGKYNQILAFRPTGWTHSNKLTSIADV 994
Query: 398 IRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ P ++GNI+IYG+PYSEHSS+ E++ FVQ
Sbjct: 995 L-PQTKGNISIYGIPYSEHSSYPEMKRFVQ 1023
>gi|76655155|ref|XP_580486.2| PREDICTED: DNA cross-link repair 1A protein [Bos taurus]
gi|297490989|ref|XP_002698556.1| PREDICTED: DNA cross-link repair 1A protein [Bos taurus]
gi|296472627|tpg|DAA14742.1| TPA: Snm1-like [Bos taurus]
Length = 1051
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 161/321 (50%), Positives = 227/321 (70%), Gaps = 3/321 (0%)
Query: 107 STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH 166
S +++ ++ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++
Sbjct: 699 SESSNAGELRKRTCPFYKKIPGTGFTVDAFQYGWVEGCTAYFLTHFHSDHYAGLSKNFTF 758
Query: 167 GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQD 226
PIYCS +T L++ L V YIHPL +TE +++G+KV LL+ANHCPGA +I F L +
Sbjct: 759 -PIYCSKITGNLLKSKLHVQEQYIHPLPTDTECIVNGIKVILLDANHCPGAVMILFCLPN 817
Query: 227 GQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
G LHTGDFRA M+ LL H+V+ LYLDTTYC+P+Y FPS+++V+ + +
Sbjct: 818 GHVILHTGDFRADPSMERS-LLGCHKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFET 876
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
+ P+ LVV G YSIGKE +FLAI+ LG K+ + + LQ F+ PE+S + T
Sbjct: 877 VTLNPRALVVCGTYSIGKEKIFLAIADVLGSKVGMSKEKYNTLQCFNIPEVSSFITTDMC 936
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNI 406
++L+H+LPM + F+ L+++LK G +Y +LAFRPTGWT+S + + D+I P ++GNI
Sbjct: 937 NSLVHLLPMMQINFKGLQNHLKKCGGKYNQILAFRPTGWTHSNKLTSLADII-PQTKGNI 995
Query: 407 TIYGVPYSEHSSFTELREFVQ 427
+IYG+PYSEHSS+ E++ FVQ
Sbjct: 996 SIYGIPYSEHSSYLEMKRFVQ 1016
>gi|403259476|ref|XP_003922238.1| PREDICTED: DNA cross-link repair 1A protein [Saimiri boliviensis
boliviensis]
Length = 1048
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 159/319 (49%), Positives = 226/319 (70%), Gaps = 3/319 (0%)
Query: 109 ATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP 168
++++ ++ ++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K + P
Sbjct: 698 SSNVGELRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFIF-P 756
Query: 169 IYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQ 228
+YCS +T L++ L V YIHPL L TE +++GVKV LL+ANHCPGA +I F L +G
Sbjct: 757 VYCSEITGNLLKNKLHVQEQYIHPLPLETECIVNGVKVVLLDANHCPGAVMILFCLPNGT 816
Query: 229 CYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
LHTGDFRA M+ LL N +V++LYLDTTYC+P+Y FPS+++V+ + + +
Sbjct: 817 VILHTGDFRADPSMERS-LLANRKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVT 875
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
P+ LVV G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +
Sbjct: 876 LNPRALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSS 935
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITI 408
L+H+LPM + F++L+ +LK YG +Y +LAF+PTGWT+S + D+I P ++GNI+I
Sbjct: 936 LVHLLPMMQINFKSLQSHLKKYGGKYDQILAFKPTGWTHSNKFTSIADVI-PQTKGNISI 994
Query: 409 YGVPYSEHSSFTELREFVQ 427
YG+PYSEHSS+ E++ FVQ
Sbjct: 995 YGIPYSEHSSYLEMKRFVQ 1013
>gi|402881531|ref|XP_003904323.1| PREDICTED: DNA cross-link repair 1A protein [Papio anubis]
Length = 1039
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 221/310 (71%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 698 KTCPFYKKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 756
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE V++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 757 LLKNKLHVQEQYIHPLPLDTECVVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 816
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ + LL + +V++LYLDTTYC+P+Y FPS+++V+ + + L P LVV
Sbjct: 817 ADPSME-HSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHALVVC 875
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + L+ + PE++ + T +L+H+LPM
Sbjct: 876 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCSSLVHLLPMMQ 935
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+++LK YG +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 936 INFKGLQNHLKKYGGKYNQILAFRPTGWTHSNKFPRIADVI-PQTKGNISIYGIPYSEHS 994
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 995 SYLEMKRFVQ 1004
>gi|301755506|ref|XP_002913597.1| PREDICTED: DNA cross-link repair 1A protein-like [Ailuropoda
melanoleuca]
gi|281347740|gb|EFB23324.1| hypothetical protein PANDA_001409 [Ailuropoda melanoleuca]
Length = 1049
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 165/333 (49%), Positives = 227/333 (68%), Gaps = 4/333 (1%)
Query: 96 PMKKLKASNGK-STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHY 154
P +L+ N K + ++ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH
Sbjct: 685 PCGRLQRGNTKIPESPSAGQLRTRTCPFYKKIPGTGFTVDAFQYGLVEGCTAYFLTHFHS 744
Query: 155 DHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHC 214
DHY GL K ++ PIYCS +T L+R L V Y+HPL ++TE +++GVKV LL+ANHC
Sbjct: 745 DHYAGLSKNFTF-PIYCSEITGNLLRSKLHVQKQYVHPLPMDTECIVNGVKVVLLDANHC 803
Query: 215 PGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKED 274
PGA +I F L +G LHTGDFRA M+ L RV+ LYLDTTYC+P+Y FPS+++
Sbjct: 804 PGAVMILFYLPNGNVLLHTGDFRADPTMERS-RLAGQRVHTLYLDTTYCSPEYSFPSQQE 862
Query: 275 VLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW 334
V+ + + + P+ LVV G YSIGKE VFLAI+ LG K+ + + + LQ +
Sbjct: 863 VIQFAINTAFEAVTLNPRVLVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNI 922
Query: 335 PELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQ 394
PEL+ + T +L+H+LPM + F+ L+ +LK G +Y VLAFRPTGWT+S + +
Sbjct: 923 PELNSFITTDMCSSLVHLLPMMQINFKALQSHLKKCGGKYDQVLAFRPTGWTHSNKLTSI 982
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
D+I P ++GNI+IYG+PYSEHSS+ E++ FVQ
Sbjct: 983 ADII-PQTKGNISIYGIPYSEHSSYLEIKRFVQ 1014
>gi|440911917|gb|ELR61536.1| DNA cross-link repair 1A protein [Bos grunniens mutus]
Length = 1051
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 161/321 (50%), Positives = 226/321 (70%), Gaps = 3/321 (0%)
Query: 107 STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH 166
S +++ ++ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++
Sbjct: 699 SESSNAGELRKRTCPFYKKIPGTGFTVDAFQYGWVEGCTAYFLTHFHSDHYAGLSKNFTF 758
Query: 167 GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQD 226
PIYCS +T L++ L V YIHPL +TE +++G+KV LL+ANHCPGA +I F L +
Sbjct: 759 -PIYCSKITGNLLKSKLHVQEQYIHPLPTDTECIVNGIKVILLDANHCPGAVMILFCLPN 817
Query: 227 GQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
G LHTGDFRA M+ LL H+V+ LYLDTTYC+P+Y FPS+++V+ + +
Sbjct: 818 GHVILHTGDFRADPSMERS-LLGCHKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFET 876
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
+ P+ LVV G YSIGKE +FLAI+ LG K+ + + LQ F PE+S + T
Sbjct: 877 VTLNPRALVVCGTYSIGKEKIFLAIADVLGSKVGMSREKYNTLQCFSIPEVSSFITTDMC 936
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNI 406
++L+H+LPM + F+ L+++LK G +Y +LAFRPTGWT+S + + D+I P ++GNI
Sbjct: 937 NSLVHLLPMMQINFKGLQNHLKKCGGKYNQILAFRPTGWTHSNKLTSLADII-PQTKGNI 995
Query: 407 TIYGVPYSEHSSFTELREFVQ 427
+IYG+PYSEHSS+ E++ FVQ
Sbjct: 996 SIYGIPYSEHSSYLEMKRFVQ 1016
>gi|153791623|ref|NP_001093331.1| uncharacterized protein LOC733261 [Xenopus laevis]
gi|148922160|gb|AAI46633.1| LOC733261 protein [Xenopus laevis]
Length = 932
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 217/310 (70%), Gaps = 2/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CPFYKKIPGT F VDAF+YG I+GCSAYFLTHFH DHYGGL K++ PIYCS +T
Sbjct: 588 KQCPFYKKIPGTGFAVDAFQYGQIEGCSAYFLTHFHSDHYGGLTKKFRF-PIYCSKITGN 646
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV+ L V +I+ L +NTE V++G++V LLEANHCPGA L+ FRL +G LHTGDFR
Sbjct: 647 LVQNKLRVESEFINTLPMNTECVVNGIRVVLLEANHCPGAVLLLFRLPNGTSVLHTGDFR 706
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A R M+SYP L+ RV+ LYLDTTYC+P+Y FP +++ + + V + + P+TLVV
Sbjct: 707 ADRSMESYPALIGQRVHTLYLDTTYCSPEYTFPPQQETIQFAVNIAFETVTLYPRTLVVC 766
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKE VFLAI+ LG K+ + + + +Q + ++ + T + T LHVLPM
Sbjct: 767 GTYSVGKEKVFLAIADVLGCKVCMSQDKYKTMQCLESEDIRSLVTTDWHSTALHVLPMMQ 826
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L +L + +Y VLAF+PTGWTYS++ D I+P RG +T+YG+PYSEHS
Sbjct: 827 VNFKGLNVHLGKFPGKYDRVLAFKPTGWTYSDSSVLVAD-IKPEIRGKVTVYGIPYSEHS 885
Query: 418 SFTELREFVQ 427
S++EL+ FVQ
Sbjct: 886 SYSELKRFVQ 895
>gi|380818542|gb|AFE81144.1| DNA cross-link repair 1A protein [Macaca mulatta]
Length = 1039
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 221/310 (71%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 698 KTCPFYKKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 756
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIH L L+TE V++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 757 LLKNKLHVQEQYIHTLPLDTECVVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 816
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ + LL + +V++LYLDTTYC+P+Y FPS+++V+ + + L P TLVV
Sbjct: 817 ADPSME-HSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHTLVVC 875
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + L+ + PE++ + T +L+H+LPM
Sbjct: 876 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCSSLVHLLPMMQ 935
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+++LK YG +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 936 INFKGLQNHLKKYGGKYNQILAFRPTGWTHSNKFPRIADVI-PQTKGNISIYGIPYSEHS 994
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 995 SYLEMKRFVQ 1004
>gi|149634612|ref|XP_001513453.1| PREDICTED: DNA cross-link repair 1A protein [Ornithorhynchus
anatinus]
Length = 994
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 155/308 (50%), Positives = 219/308 (71%), Gaps = 2/308 (0%)
Query: 120 CPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
CPFYKKIPGT FTVDAF+YG+I C+AYFLTHFH DHYGGL K++++ PIYC+ +T LV
Sbjct: 654 CPFYKKIPGTGFTVDAFQYGAIDDCTAYFLTHFHSDHYGGLSKKFTY-PIYCNKITGNLV 712
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ L V YIH L ++T +++G+KV LL+ANHCPGA ++ F L +G LHTGDFRA
Sbjct: 713 KSKLKVQEQYIHILPMDTVCIVNGIKVVLLDANHCPGAVMLLFYLPNGNVILHTGDFRAD 772
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
M+ YP L+ ++++LYLDTTYC+P+Y FPS+++V+ + + P TLV+ G
Sbjct: 773 PSMKRYPKLIGQKIHMLYLDTTYCSPEYSFPSQQEVIQFAANTAFESINLNPHTLVICGT 832
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
YSIGKE VF+AI++ LG K+ + + + L+ + E++ + T + T +H+LPM +
Sbjct: 833 YSIGKEKVFIAIAEVLGSKVSMSQEKYKTLRCLELEEVNSLITTDWSSTKVHLLPMMQIT 892
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSF 419
F+ L+ +L +G +Y VLAF+PTGWTYSE + D I+P +RGNITIYG+PYSEHSS+
Sbjct: 893 FKGLQSHLSKFGGKYNQVLAFKPTGWTYSEKSSSISD-IKPETRGNITIYGIPYSEHSSY 951
Query: 420 TELREFVQ 427
E++ FVQ
Sbjct: 952 LEMKHFVQ 959
>gi|426253134|ref|XP_004020255.1| PREDICTED: DNA cross-link repair 1A protein [Ovis aries]
Length = 1051
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 161/321 (50%), Positives = 224/321 (69%), Gaps = 3/321 (0%)
Query: 107 STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH 166
S +++ ++ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K
Sbjct: 699 SESSNAGELRKRTCPFYKKIPGTGFTVDAFQYGWVEGCTAYFLTHFHSDHYAGLSKNCMF 758
Query: 167 GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQD 226
PIYCS +T L++ L V YIHPL ++TE +++G+KV LLEANHCPGA +I F L +
Sbjct: 759 -PIYCSEITGNLLKSKLHVQEQYIHPLPIDTECIVNGIKVILLEANHCPGAVMILFYLPN 817
Query: 227 GQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
G LHTGDFRA M+ LL +V+ LYLDTTYC+P+Y FPS+++V+ + +
Sbjct: 818 GHVILHTGDFRADPSMERS-LLACQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFET 876
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
+ P+ LVV G YSIGKE +FLAI+ LG K+ + + LQ F+ PE+S + T
Sbjct: 877 VTLNPQALVVCGTYSIGKEKIFLAIADVLGSKVGMSKEKYNTLQCFNIPEVSSLITTDMC 936
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNI 406
+L+H+LPM + F+ L+++LK G +Y +LAFRPTGWT+S + + D+I P ++GNI
Sbjct: 937 KSLVHLLPMMQINFKGLQNHLKKCGGKYNQILAFRPTGWTHSNKLTSLADII-PQTKGNI 995
Query: 407 TIYGVPYSEHSSFTELREFVQ 427
+IYG+PYSEHSS+ E++ FVQ
Sbjct: 996 SIYGIPYSEHSSYLEMKRFVQ 1016
>gi|194205654|ref|XP_001495731.2| PREDICTED: DNA cross-link repair 1A protein [Equus caballus]
Length = 1043
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/333 (50%), Positives = 230/333 (69%), Gaps = 10/333 (3%)
Query: 99 KLKASNGK----STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHY 154
KL+ N K S A L+K ++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH
Sbjct: 682 KLQRGNTKIPESSNAGELRK---KTCPFYKKIPGTGFTVDAFQYGLVEGCTAYFLTHFHS 738
Query: 155 DHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHC 214
DHY GL K ++ P+YCS +T L++ L V YIHPL ++T +++GVKV L+ANHC
Sbjct: 739 DHYAGLSKNFTF-PVYCSEITGNLLKCKLHVQEQYIHPLPMDTGCIVNGVKVVFLDANHC 797
Query: 215 PGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKED 274
PGA +I F L +G LHTGDFRA M+ LL + RV+ LYLDTTYC+P+Y FPS+++
Sbjct: 798 PGAVMILFYLPNGNVMLHTGDFRADPSMERS-LLASQRVHTLYLDTTYCSPEYSFPSQQE 856
Query: 275 VLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW 334
V+ +V+ + P TLVV G YSIGKE VFLAI+ LG K+ + + + LQ +
Sbjct: 857 VIQFVINTAFEAVTLNPCTLVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNI 916
Query: 335 PELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQ 394
PE++ + T ++L+H+LPM + F+ L+ +LK G +Y +LAFRPTGWT+S + +
Sbjct: 917 PEINSLITTDMCNSLVHLLPMMQINFKGLQSHLKKCGGKYDRILAFRPTGWTHSNKLTSI 976
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
D++ P ++GNI+IYGVPYSEHSSF E++ FVQ
Sbjct: 977 ADVL-PRTKGNISIYGVPYSEHSSFLEMKRFVQ 1008
>gi|156390186|ref|XP_001635152.1| predicted protein [Nematostella vectensis]
gi|156222243|gb|EDO43089.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 159/308 (51%), Positives = 212/308 (68%), Gaps = 4/308 (1%)
Query: 120 CPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
CPFYKKIP TPF VDAFRYGSI G YFL+HFHYDHYGGL K +SH PIYCS +TA LV
Sbjct: 2 CPFYKKIPDTPFVVDAFRYGSIPGIKVYFLSHFHYDHYGGLKKGFSH-PIYCSKVTANLV 60
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ V+ YI L ++T ++D V+VTLL+ANHCPGA L+ F L +G+ LHTGDFRAS
Sbjct: 61 ESKIKVSQRYIKALPMDTPVIVDKVQVTLLDANHCPGAVLLLFELPNGKTILHTGDFRAS 120
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
R M+SYP L N ++ LYLDTTYC+P+Y FP +E+ +N+ V + + PKTL+V G
Sbjct: 121 REMESYPALANKTIDTLYLDTTYCDPQYTFPKQEETINFAVTKAAQAVSENPKTLIVCGT 180
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
Y+IGKE VFLAI+K LG K+ + ++R+L S + + + T ++ +HVLPM L
Sbjct: 181 YTIGKEKVFLAIAKELGCKVTVQSDKKRILDSLESDFIQSVITTDKSEGRIHVLPMGKLN 240
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSF 419
+ L Y+ + ++ V+AF+PTGW E L RP+++G I+IYGVPYSEHSS+
Sbjct: 241 HQHLSSYMDQFKGKFTRVVAFKPTGW---EHKSGPLSATRPVTKGPISIYGVPYSEHSSY 297
Query: 420 TELREFVQ 427
E++ FVQ
Sbjct: 298 EEMKRFVQ 305
>gi|410976105|ref|XP_003994466.1| PREDICTED: DNA cross-link repair 1A protein [Felis catus]
Length = 1049
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/321 (49%), Positives = 225/321 (70%), Gaps = 6/321 (1%)
Query: 107 STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH 166
S A L+K ++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++
Sbjct: 700 SNAGQLRK---KTCPFYKKIPGTGFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFTF 756
Query: 167 GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQD 226
P+YCS +T L++ L + Y+HPL ++TE +++GVKV LL+ANHCPGA +I F L +
Sbjct: 757 -PVYCSEITGNLLKSKLHMQKQYVHPLPMDTECIVNGVKVILLDANHCPGAVMILFYLPN 815
Query: 227 GQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
G+ LHTGDFRA M+ LL +V+ LYLDTTYC+P+Y FPS+++V+ + +
Sbjct: 816 GKVLLHTGDFRAHPTMERS-LLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEA 874
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
+ P+ LVV G YSIGKE VFLAI+ LG K+ + + + LQ + PEL+ + T
Sbjct: 875 VTLNPRVLVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPELNSLITTDMC 934
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNI 406
++L+H+LPM + F+ L+ +LK G +Y +LAFRPTGWT+S + D+I P ++GNI
Sbjct: 935 NSLVHLLPMMQINFKALQSHLKKCGGKYDQILAFRPTGWTHSNKLTGIADII-PQTKGNI 993
Query: 407 TIYGVPYSEHSSFTELREFVQ 427
+IYG+PYSEHSS+ E++ FVQ
Sbjct: 994 SIYGIPYSEHSSYLEMKRFVQ 1014
>gi|56711354|ref|NP_001008683.1| DNA cross-link repair 1A protein [Gallus gallus]
gi|73620743|sp|Q5QJC4.1|DCR1A_CHICK RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1
homolog A; Short=chSNM1A
gi|47156206|gb|AAR27404.1| SNM1A [Gallus gallus]
Length = 972
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 217/310 (70%), Gaps = 2/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CPFYKKIPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K + P+YC+ +T
Sbjct: 628 KQCPFYKKIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYCGLTKNFVF-PLYCNKITGN 686
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV+ L V YI+ L ++TE +++G+KV LL+ANHCPGA +I F L G LHTGDFR
Sbjct: 687 LVKSKLRVKEQYINVLPMDTECIVNGIKVLLLDANHCPGATMILFYLPSGTAILHTGDFR 746
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ YP L+ +++ LYLDTTYC+P+Y FPS+++V+ + V + P+TLVV
Sbjct: 747 ADPSMERYPALIGQKIHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFEMVTLNPRTLVVC 806
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI++ LG K + + + LQ + ++ + + TLLH+LPM
Sbjct: 807 GTYSIGKEKVFLAIAEVLGSKASMSRDKYKTLQCLESAAVNSLITMNWDGTLLHILPMMQ 866
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+D+L + + VLAF+PTGWTYS++ + +D I+P +RGNITIYG+PYSEHS
Sbjct: 867 INFKGLQDHLNKFSENFDQVLAFKPTGWTYSDSCLSVMD-IKPQTRGNITIYGIPYSEHS 925
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 926 SYLEMKRFVQ 935
>gi|432922357|ref|XP_004080312.1| PREDICTED: DNA cross-link repair 1A protein-like [Oryzias latipes]
Length = 879
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 157/308 (50%), Positives = 216/308 (70%), Gaps = 2/308 (0%)
Query: 120 CPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
CPFYKKIPGT F +DAF+YG I+G SAYFLTHFH DHYGGL R S PIYC+ +T LV
Sbjct: 539 CPFYKKIPGTKFAIDAFQYGEIEGISAYFLTHFHSDHYGGL-TRNSTLPIYCNKITGNLV 597
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ L V Y+H L +NTE +++GV++ LL+ANHCPGAA++ F L DGQ LHTGDFRA
Sbjct: 598 KSKLRVAEEYVHILPMNTEVIVEGVRICLLDANHCPGAAMLLFFLPDGQTVLHTGDFRAD 657
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
M++YP L+ RV LYLDTTYC+P+Y FP +++V+N+ + P+TLVV G+
Sbjct: 658 PSMETYPELLGCRVQTLYLDTTYCSPEYTFPKQQEVINFAANRAFESVTLNPRTLVVCGS 717
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
YS+GKE VFLA+++ LG K+ + + + + ++ + T +HVLPM L
Sbjct: 718 YSVGKEKVFLALAEVLGSKVSLSKDKYNTMCCLESEQIKKRITTDWKGAQVHVLPMMQLT 777
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSF 419
F+ L+D+L Y +QY ++AF+PTGWT+S+ VG+ +D I+P GN+++YG+PYSEHSSF
Sbjct: 778 FKKLQDHLARYSSQYDQLVAFKPTGWTFSQQVGS-VDDIQPQISGNVSVYGIPYSEHSSF 836
Query: 420 TELREFVQ 427
EL+ FVQ
Sbjct: 837 LELKRFVQ 844
>gi|355562792|gb|EHH19386.1| hypothetical protein EGK_20079 [Macaca mulatta]
gi|355783112|gb|EHH65033.1| hypothetical protein EGM_18373 [Macaca fascicularis]
Length = 1039
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 220/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 698 KTCPFYKKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 756
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIH L L+ E V++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 757 LLKNKLHVQEQYIHTLPLDIECVVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 816
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ + LL + +V++LYLDTTYC+P+Y FPS+++V+ + + L P TLVV
Sbjct: 817 ADPSME-HSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHTLVVC 875
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + L+ + PE++ + T +L+H+LPM
Sbjct: 876 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCSSLVHLLPMMQ 935
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+++LK YG +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 936 INFKGLQNHLKKYGGKYNQILAFRPTGWTHSNKFPRIADVI-PQTKGNISIYGIPYSEHS 994
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 995 SYLEMKRFVQ 1004
>gi|109090605|ref|XP_001090942.1| PREDICTED: DNA cross-link repair 1A protein [Macaca mulatta]
Length = 1039
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 220/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 698 KTCPFYKKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 756
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIH L L+ E V++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 757 LLKNKLHVQEQYIHTLPLDIECVVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 816
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ + LL + +V++LYLDTTYC+P+Y FPS+++V+ + + L P TLVV
Sbjct: 817 ADPSME-HSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHTLVVC 875
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + L+ + PE++ + T +L+H+LPM
Sbjct: 876 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCSSLVHLLPMMQ 935
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+++LK YG +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 936 INFKGLQNHLKKYGGKYNQILAFRPTGWTHSNKFPRIADVI-PQTKGNISIYGIPYSEHS 994
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 995 SYLEMKRFVQ 1004
>gi|345792823|ref|XP_535018.3| PREDICTED: DNA cross-link repair 1A protein [Canis lupus familiaris]
Length = 1049
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 155/314 (49%), Positives = 221/314 (70%), Gaps = 3/314 (0%)
Query: 114 KIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSP 173
++ ++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS
Sbjct: 704 QLRKKTCPFYKKIPGTGFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSE 762
Query: 174 LTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHT 233
+T L++ L V YIHPL ++TE +++GVKV LL+ANHCPGA +I F L +G LHT
Sbjct: 763 ITGNLLKSKLHVQKQYIHPLPMDTECIVNGVKVVLLDANHCPGAVMILFYLPNGNVLLHT 822
Query: 234 GDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
GDFRA M+ L +V+ LYLDTTYC+P+Y FPS+++V+ + + + + P+
Sbjct: 823 GDFRADPTMERS-RLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTRNPRV 881
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL 353
LVV G YSIGKE VFLAI+ LG ++ + + + LQ + P+L+ + T ++L+H+L
Sbjct: 882 LVVCGTYSIGKEKVFLAIADVLGSRVAMSQEKYKTLQCLNIPDLNSFITTDMCNSLVHLL 941
Query: 354 PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPY 413
PM + F+ L+ +LK G ++ +LAFRPTGWT+S + N D++ P +GNI+IYG+PY
Sbjct: 942 PMMQINFKALQSHLKKCGGEFNQILAFRPTGWTHSNQLTNIRDIV-PQIKGNISIYGIPY 1000
Query: 414 SEHSSFTELREFVQ 427
SEHSS+ EL+ FVQ
Sbjct: 1001 SEHSSYLELKRFVQ 1014
>gi|73620752|sp|Q9JIC3.2|DCR1A_MOUSE RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1
homolog A
Length = 1026
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 217/312 (69%), Gaps = 3/312 (0%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
V R+CPFYK+IPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 683 VRRTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEIT 741
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
L++ L V YI L ++TE V+D VKV LL+ANHCPGA +I F+L +G LHTGD
Sbjct: 742 GNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILHTGD 801
Query: 236 FRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
FRA M+ L +V+ L+LDTTYC+P+Y FPS+++V+ + + + P+ LV
Sbjct: 802 FRADPSMERS-RLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALV 860
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V G Y IGKE VFLAI+ LG K+ + + + LQ + PE+S + T D+L+H+LPM
Sbjct: 861 VCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPM 920
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
+ F+ L+ +LK G +Y +LAFRPTGWT+S + + D+I P +RGNI+IYG+PYSE
Sbjct: 921 MQINFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADII-PQTRGNISIYGIPYSE 979
Query: 416 HSSFTELREFVQ 427
HSS+ E++ FVQ
Sbjct: 980 HSSYLEMKRFVQ 991
>gi|148669815|gb|EDL01762.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae), isoform
CRA_b [Mus musculus]
Length = 1029
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 217/312 (69%), Gaps = 3/312 (0%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
V R+CPFYK+IPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 686 VRRTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEIT 744
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
L++ L V YI L ++TE V+D VKV LL+ANHCPGA +I F+L +G LHTGD
Sbjct: 745 GNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILHTGD 804
Query: 236 FRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
FRA M+ L +V+ L+LDTTYC+P+Y FPS+++V+ + + + P+ LV
Sbjct: 805 FRADPSMERS-RLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALV 863
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V G Y IGKE VFLAI+ LG K+ + + + LQ + PE+S + T D+L+H+LPM
Sbjct: 864 VCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPM 923
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
+ F+ L+ +LK G +Y +LAFRPTGWT+S + + D+I P +RGNI+IYG+PYSE
Sbjct: 924 MQINFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADII-PQTRGNISIYGIPYSE 982
Query: 416 HSSFTELREFVQ 427
HSS+ E++ FVQ
Sbjct: 983 HSSYLEMKRFVQ 994
>gi|66910826|gb|AAH97815.1| LOC733261 protein [Xenopus laevis]
Length = 526
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 216/310 (69%), Gaps = 2/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CPFYKKIPGT F VDAF+YG I+GCSAYFLTHFH DHYGGL K++ PIYCS +T
Sbjct: 182 KQCPFYKKIPGTGFAVDAFQYGQIEGCSAYFLTHFHSDHYGGLTKKFRF-PIYCSKITGN 240
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV+ L V +I+ L +NTE V++G++V LLEANHCPGA L+ FRL +G LHTGDFR
Sbjct: 241 LVQNKLRVESEFINTLPMNTECVVNGIRVVLLEANHCPGAVLLLFRLPNGTSVLHTGDFR 300
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A R M+SYP L+ RV+ LYLDTTYC+P+Y FP +++ + + V + + P TLVV
Sbjct: 301 ADRSMESYPALIGQRVHTLYLDTTYCSPEYTFPPQQETIQFAVNIAFEMVTLYPCTLVVC 360
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKE VFLAI+ LG K+ + + + +Q + ++ + T + T LHVLPM
Sbjct: 361 GTYSVGKEKVFLAIADVLGCKVCMSQDKYKTMQCLESEDIRSLVTTDWHSTALHVLPMMQ 420
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L +L + +Y VLAF+PTGWTYS++ D I+P RG +T+YG+PYSEHS
Sbjct: 421 VNFKGLNVHLGKFPGKYDRVLAFKPTGWTYSDSSVLVAD-IKPEIRGKVTVYGIPYSEHS 479
Query: 418 SFTELREFVQ 427
S++EL+ FVQ
Sbjct: 480 SYSELKRFVQ 489
>gi|223278374|ref|NP_055696.3| DNA cross-link repair 1A protein [Homo sapiens]
gi|425871110|ref|NP_001258745.1| DNA cross-link repair 1A protein [Homo sapiens]
gi|311033461|sp|Q6PJP8.3|DCR1A_HUMAN RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1
homolog A; Short=hSNM1; Short=hSNM1A
gi|16753254|gb|AAH13124.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens]
gi|168274358|dbj|BAG09599.1| DNA cross-link repair 1A protein [synthetic construct]
Length = 1040
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 699 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 757
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 758 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 817
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V++LYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 818 ADPSMERS-LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 876
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 877 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 936
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 937 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 995
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 996 SYLEMKRFVQ 1005
>gi|60359840|dbj|BAD90139.1| mKIAA0086 protein [Mus musculus]
Length = 984
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 217/312 (69%), Gaps = 3/312 (0%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
V R+CPFYK+IPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 641 VRRTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEIT 699
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
L++ L V YI L ++TE V+D VKV LL+ANHCPGA +I F+L +G LHTGD
Sbjct: 700 GNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILHTGD 759
Query: 236 FRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
FRA M+ L +V+ L+LDTTYC+P+Y FPS+++V+ + + + P+ LV
Sbjct: 760 FRADPSMERS-RLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALV 818
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V G Y IGKE VFLAI+ LG K+ + + + LQ + PE+S + T D+L+H+LPM
Sbjct: 819 VCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPM 878
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
+ F+ L+ +LK G +Y +LAFRPTGWT+S + + D+I P +RGNI+IYG+PYSE
Sbjct: 879 MQINFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADII-PQTRGNISIYGIPYSE 937
Query: 416 HSSFTELREFVQ 427
HSS+ E++ FVQ
Sbjct: 938 HSSYLEMKRFVQ 949
>gi|347543745|ref|NP_061301.3| DNA cross-link repair 1A protein [Mus musculus]
Length = 1047
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 217/312 (69%), Gaps = 3/312 (0%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
V R+CPFYK+IPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 704 VRRTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEIT 762
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
L++ L V YI L ++TE V+D VKV LL+ANHCPGA +I F+L +G LHTGD
Sbjct: 763 GNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILHTGD 822
Query: 236 FRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
FRA M+ L +V+ L+LDTTYC+P+Y FPS+++V+ + + + P+ LV
Sbjct: 823 FRADPSMERS-RLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALV 881
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V G Y IGKE VFLAI+ LG K+ + + + LQ + PE+S + T D+L+H+LPM
Sbjct: 882 VCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPM 941
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
+ F+ L+ +LK G +Y +LAFRPTGWT+S + + D+I P +RGNI+IYG+PYSE
Sbjct: 942 MQINFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADII-PQTRGNISIYGIPYSE 1000
Query: 416 HSSFTELREFVQ 427
HSS+ E++ FVQ
Sbjct: 1001 HSSYLEMKRFVQ 1012
>gi|297687406|ref|XP_002821207.1| PREDICTED: DNA cross-link repair 1A protein [Pongo abelii]
Length = 1039
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 698 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 756
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 757 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 816
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V++LYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 817 ADPSMERS-LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 875
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 876 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 935
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 936 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 994
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 995 SYLEMKRFVQ 1004
>gi|47060293|gb|AAT09762.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens]
gi|119569874|gb|EAW49489.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|119569875|gb|EAW49490.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae), isoform CRA_a
[Homo sapiens]
Length = 1040
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 699 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 757
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 758 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 817
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V++LYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 818 ADPSMERS-LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 876
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 877 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 936
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 937 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 995
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 996 SYLEMKRFVQ 1005
>gi|40788960|dbj|BAA07646.2| KIAA0086 [Homo sapiens]
Length = 1044
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 703 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 761
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 762 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 821
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V++LYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 822 ADPSMERS-LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 880
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 881 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 940
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 941 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 999
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 1000 SYLEMKRFVQ 1009
>gi|114632910|ref|XP_508045.2| PREDICTED: DNA cross-link repair 1A protein [Pan troglodytes]
gi|410337131|gb|JAA37512.1| DNA cross-link repair 1A [Pan troglodytes]
Length = 1040
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 699 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 757
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 758 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 817
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V++LYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 818 ADPSMERS-LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 876
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 877 GTYSIGKEKVFLAIADVLGSKVGMSREKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 936
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 937 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 995
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 996 SYLEMKRFVQ 1005
>gi|38566205|gb|AAH62582.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens]
Length = 1040
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 699 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 757
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 758 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 817
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V++LYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 818 ADPSMERS-LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 876
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 877 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 936
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 937 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 995
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 996 SYLEMKRFVQ 1005
>gi|397510540|ref|XP_003825653.1| PREDICTED: DNA cross-link repair 1A protein [Pan paniscus]
Length = 1040
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 699 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 757
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 758 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 817
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V++LYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 818 ADPSMERS-LLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 876
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 877 GTYSIGKEKVFLAIADVLGSKVGMSREKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 936
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 937 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 995
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 996 SYLEMKRFVQ 1005
>gi|317419410|emb|CBN81447.1| DNA cross-link repair 1A protein [Dicentrarchus labrax]
Length = 943
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 160/308 (51%), Positives = 210/308 (68%), Gaps = 2/308 (0%)
Query: 120 CPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
CPFYKKIPGT F +DAF YG I+G +AYFLTHFH DHYGGL K S PIYC+ +T LV
Sbjct: 601 CPFYKKIPGTKFVIDAFHYGEIEGITAYFLTHFHSDHYGGLTKN-STLPIYCNRITGNLV 659
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ L V YIH L +NTE ++GV V LLEANHCPGAA++ F L DGQ LHTGDFRA
Sbjct: 660 KTKLKVAEQYIHILPMNTEVTVEGVTVILLEANHCPGAAMLLFFLPDGQTVLHTGDFRAD 719
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
M++YP LV+ RV LYLDTTYC+P+Y FP +++V+N+ + P+TLVV G+
Sbjct: 720 PSMETYPELVSCRVQTLYLDTTYCSPEYTFPRQQEVINFAASTAFELVTLNPRTLVVCGS 779
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
YS+GKE VFLA+++ LG K+ + + + + + + T +HVLPM L
Sbjct: 780 YSVGKEKVFLALAEVLGTKVCLSRDKYNTMCCLESEHVKQRITTDWKAAQVHVLPMMQLS 839
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSF 419
F+ L+DYL + QY ++AF+PTGWT+S+ V + D I+P GNI+IYG+PYSEHSSF
Sbjct: 840 FKKLQDYLARFSRQYDQLVAFKPTGWTFSQQVESVED-IQPQISGNISIYGIPYSEHSSF 898
Query: 420 TELREFVQ 427
E++ FVQ
Sbjct: 899 LEMKRFVQ 906
>gi|157818805|ref|NP_001099671.1| DNA cross-link repair 1A protein [Rattus norvegicus]
gi|149040461|gb|EDL94499.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae) (predicted)
[Rattus norvegicus]
Length = 1026
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK+IPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K ++ PIYCS +T
Sbjct: 685 RTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTR-PIYCSEITGS 743
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIH L ++TE ++DGVKV LL+ANHCPGA +I F+L +G LHTGDFR
Sbjct: 744 LLKKKLRVQEQYIHQLPMDTECIVDGVKVVLLDANHCPGATMILFQLPNGAVTLHTGDFR 803
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V+ L+LDTTYC+P+Y FPS+++ + + + + P+ L+V
Sbjct: 804 ADPSMERS-LLASRKVHTLFLDTTYCSPEYTFPSQQEAIQFAINTAFEAVTLNPRALIVC 862
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G Y IGKE VFLAI+ LG K+ + + + LQ + PE+S + T ++L+H+LPM
Sbjct: 863 GTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCNSLVHLLPMMQ 922
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+++LK G ++ +LAFRPTGWT+S + + D I P ++GNI IYG+PYSEHS
Sbjct: 923 INFKGLQNHLKKCGGKFDQILAFRPTGWTHSNNITSIAD-ITPQTKGNIAIYGIPYSEHS 981
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 982 SYLEMKRFVQ 991
>gi|348508875|ref|XP_003441978.1| PREDICTED: DNA cross-link repair 1A protein-like [Oreochromis
niloticus]
Length = 931
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 158/308 (51%), Positives = 211/308 (68%), Gaps = 2/308 (0%)
Query: 120 CPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
CPFYKKIPGT F +DAFRYG I+G +AYFLTHFH DHYGGL K S PIYC+ +T LV
Sbjct: 589 CPFYKKIPGTKFAIDAFRYGQIEGITAYFLTHFHSDHYGGLTKT-STVPIYCNRITGNLV 647
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ L V Y+H L +NTE ++GV+V LL+ANHCPGAA++ F L DGQ LHTGDFRA
Sbjct: 648 KSKLRVAEQYVHILPMNTEVTVEGVRVILLDANHCPGAAMLLFFLPDGQTVLHTGDFRAD 707
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
M++ P L++ RV LYLDTTYC+P+Y FP +++V+N+ + P+TLVV G+
Sbjct: 708 PSMETCPELLSCRVQTLYLDTTYCSPEYTFPRQQEVINFAASTAFELVTLSPRTLVVCGS 767
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
YS+GKE VFLA+++ LG K+ + + + + ++ G L T +HVLPM L
Sbjct: 768 YSVGKEKVFLALAEVLGSKVCLSRDKYNTMCCLESEQIKGRLTTDWKAAQVHVLPMMQLS 827
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSF 419
F L+D+L + QY ++AF+PTGWT+S+ ++ I+P GNITIYG+PYSEHSSF
Sbjct: 828 FRKLQDHLARFSRQYDQLVAFKPTGWTFSQQT-ESVENIQPQKSGNITIYGIPYSEHSSF 886
Query: 420 TELREFVQ 427
EL+ FVQ
Sbjct: 887 LELKRFVQ 894
>gi|443683308|gb|ELT87607.1| hypothetical protein CAPTEDRAFT_226585 [Capitella teleta]
Length = 657
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 175/357 (49%), Positives = 241/357 (67%), Gaps = 4/357 (1%)
Query: 72 QANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPF 131
Q +L +G K++ S + +K LK N + +I + CPFYKKIPGT F
Sbjct: 253 QTSLLSFFGSKNSKPSSNQNSAATQLKPLKTDNSGNKQPWTARI-KKQCPFYKKIPGTSF 311
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIH 191
TVDAF YG+I GC AYFL+HFHYDHYGGL K++ IYC +T LV L V +
Sbjct: 312 TVDAFNYGAIPGCRAYFLSHFHYDHYGGLTKKFQQQ-IYCCKVTGNLVERKLGVASKRVR 370
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNH 251
LE+NT +VI+GV+VTLL+ANHCPG+ L FRL++G+ LHTGDFRA+ M+SYP L
Sbjct: 371 KLEMNTLYVIEGVEVTLLDANHCPGSVLFLFRLENGRSILHTGDFRANVDMESYPALQGV 430
Query: 252 RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAI 311
+++ LYLDTTYC+P Y FP + DV+++ V+L ++ + QP L+VVG+Y+IGKE +FLAI
Sbjct: 431 KISQLYLDTTYCDPNYAFPPQRDVIDFAVKLAEDFHRHQPNGLIVVGSYTIGKERIFLAI 490
Query: 312 SKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYG 371
++AL KI ++ V++ D P + L T+ ++HVLPM+ L+++TL +YL
Sbjct: 491 AEALSCKICITRDKQIVMECLDDPCVQRML-TREPSAVVHVLPMNHLRYDTLLEYLNKLK 549
Query: 372 NQYAAVLAFRPTGWTYSETVGNQLDLIRP-LSRGNITIYGVPYSEHSSFTELREFVQ 427
++ +VLA +PTGW++S G LD IRP S+GNITIYGVPYSEHSSF E++ FVQ
Sbjct: 550 PRFDSVLALQPTGWSHSSGGGGGLDAIRPKRSQGNITIYGVPYSEHSSFLEMKRFVQ 606
>gi|332212859|ref|XP_003255538.1| PREDICTED: DNA cross-link repair 1A protein [Nomascus leucogenys]
Length = 1040
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 217/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKI GT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 699 KTCPFYKKITGTSFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 757
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 758 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 817
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V+VLYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 818 ADPSMERS-LLADQKVHVLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 876
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 877 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSVITTDMCSSLVHLLPMMQ 936
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 937 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 995
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 996 SYLEMKHFVQ 1005
>gi|324021704|ref|NP_001018385.3| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Danio
rerio]
Length = 926
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 216/310 (69%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CPFYKKIPGT F VDAF+YG ++G +AYFLTHFH DHYGGL K+ S PIYC+ +T+
Sbjct: 568 KRCPFYKKIPGTGFAVDAFQYGVVEGVTAYFLTHFHSDHYGGL-KKDSAVPIYCNKVTSN 626
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV+ L V+ YIH L +NTE ++ GVKVTLL+ANHCPGA ++ F L DGQ LHTGDFR
Sbjct: 627 LVKSKLKVDEQYIHVLPMNTECIVQGVKVTLLDANHCPGAVMLLFVLPDGQTVLHTGDFR 686
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ YP L R+ LYLDTTYC+P+Y FP++++V+ + V + P+TLVV
Sbjct: 687 ADPSMERYPELQGLRIQTLYLDTTYCSPEYTFPTQQEVVTFAVNTAFERVTLNPRTLVVC 746
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKE VFLA+S+ L K+ + + + + ++ + T +HVLPM
Sbjct: 747 GTYSVGKEKVFLAVSEVLSSKVCLSKDKYNTMCCLESEDIGQRITTNWQSAQVHVLPMMQ 806
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK + +Y ++AF+PTGWT+++TVG +D I P ++GNI+IYG+PYSEHS
Sbjct: 807 INFKNLQTHLKKFSKKYDQLVAFKPTGWTFNQTVG--VDDILPQTQGNISIYGIPYSEHS 864
Query: 418 SFTELREFVQ 427
SF EL+ FVQ
Sbjct: 865 SFLELKRFVQ 874
>gi|343959632|dbj|BAK63673.1| DNA cross-link repair 1A protein [Pan troglodytes]
Length = 576
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 235 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 293
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 294 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 353
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V++LYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 354 ADPSMER-SLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 412
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 413 GTYSIGKEKVFLAIADVLGSKVGMSREKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 472
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 473 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 531
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 532 SYLEMKRFVQ 541
>gi|426366239|ref|XP_004050168.1| PREDICTED: DNA cross-link repair 1A protein [Gorilla gorilla gorilla]
Length = 1040
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 699 KTCPFYKKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 757
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 758 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 817
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ + LL + +V++LYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 818 ADPSME-HSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 876
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 877 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 936
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 937 INFKGLQSHLKKCRGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 995
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 996 SYLEMKRFVQ 1005
>gi|351706821|gb|EHB09740.1| DNA cross-link repair 1A protein [Heterocephalus glaber]
Length = 1039
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 156/334 (46%), Positives = 228/334 (68%), Gaps = 3/334 (0%)
Query: 94 SPPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFH 153
S P + + + S +++ ++ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH
Sbjct: 674 SAPGRLQRGNTKVSQSSNAGELRQRTCPFYKKIPGTGFTVDAFQYGEVEGCTAYFLTHFH 733
Query: 154 YDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANH 213
DHY GL K S P+YCS +T L++ L V YIHPL ++T+ +++GVKV LL+ANH
Sbjct: 734 SDHYAGLSKN-STFPVYCSEITGNLLKSKLHVQEQYIHPLPMDTKCIVNGVKVILLDANH 792
Query: 214 CPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKE 273
CPGAA++ F L +G LHTGDFRA M+ LL +V+ LYLDTTYC+P+Y FPS++
Sbjct: 793 CPGAAMVLFYLPNGTVVLHTGDFRADPSMERS-LLAGQKVHTLYLDTTYCSPEYTFPSQQ 851
Query: 274 DVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFD 333
+V+ + + + P+ L++ G Y IGKE VFLAI+ LG K+ + + L+ +
Sbjct: 852 EVIQFAINTAFEAVTLNPRALIICGTYCIGKEKVFLAIADVLGSKVGMSKEKYETLRCLN 911
Query: 334 WPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGN 393
E++ + T ++L+H+LPM + F++L+ +LK YG +Y +LAFRPTGWT+S +
Sbjct: 912 ISEINSLITTDMCNSLVHLLPMMQINFKSLQSHLKKYGEKYDQILAFRPTGWTHSNKLTC 971
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
D + P ++GNI+IYG+PYSEHSS+ E++ FVQ
Sbjct: 972 IAD-VTPQTKGNISIYGIPYSEHSSYLEMKRFVQ 1004
>gi|326923949|ref|XP_003208195.1| PREDICTED: DNA cross-link repair 1A protein-like [Meleagris
gallopavo]
Length = 973
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/310 (49%), Positives = 214/310 (69%), Gaps = 2/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CPFYKKIPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K + P+YC+ +T
Sbjct: 629 KQCPFYKKIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYCGLTKNFVF-PLYCNKITGN 687
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV+ L V YI+ L ++TE +++G+KV LL+ANHCPGA +I F L G LHTGDFR
Sbjct: 688 LVKSKLQVKEQYINVLPMDTECIVNGIKVLLLDANHCPGATMILFYLPGGTAILHTGDFR 747
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ YP L+ +++ LYLDTTYC+P+Y FPS+++V+ + V + P+TLVV
Sbjct: 748 ADPSMERYPALIGQKIHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFEMVTLNPRTLVVC 807
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGK FLAI++ LG K + + + LQ + ++ + + TLLH+LPM
Sbjct: 808 GTYSIGKRKSFLAIAEVLGSKASMSRDKYKTLQCLESAAINSLISMNWDGTLLHILPMMQ 867
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+D+L + + VLAF+PTGWTYS++ + +D I+P +RG ITIYG+PYSEHS
Sbjct: 868 INFKGLQDHLNKFSENFDQVLAFKPTGWTYSDSCLSVMD-IKPQTRGKITIYGIPYSEHS 926
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 927 SYLEMKRFVQ 936
>gi|405968531|gb|EKC33595.1| DNA cross-link repair 1A protein [Crassostrea gigas]
Length = 1051
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/311 (50%), Positives = 211/311 (67%), Gaps = 4/311 (1%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
RSCPFYKKIP T FTVDAF YG I GC+ Y L+HFHYDHY G+ K +S PIYCS +TA
Sbjct: 693 RSCPFYKKIPDTGFTVDAFSYGVIPGCTGYILSHFHYDHYTGMTKSFSQ-PIYCSKITAN 751
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV + V S++H L LN V++GV++T LEANHCPG+ LI F+L+DG+ +LHTGDFR
Sbjct: 752 LVISKIKVKESFVHTLPLNKATVVNGVELTFLEANHCPGSVLILFKLRDGRAFLHTGDFR 811
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ YP L R++ LYLDTTYCNP Y FP + +V+++ V L + L++ P+TL+V
Sbjct: 812 ADPSMEKYPALTGVRISQLYLDTTYCNPTYAFPPQSEVIDFTVNLVRQELQRNPRTLIVC 871
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G+Y+IGKE +F+AI+ ALG KI ++ +L + L +C ND+ LHVLPM+
Sbjct: 872 GSYTIGKERIFIAIADALGCKICVMRDKKNILDCLEDISLRERICLNFNDSCLHVLPMNK 931
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRP-LSRGNITIYGVPYSEH 416
L + L ++ Y +LA PTGWT+S+ + L IRP +R + IYG+PYSEH
Sbjct: 932 LNPKALLEHSGKLKPSYGNILAIEPTGWTFSKV--SSLQEIRPKYNRDGVKIYGIPYSEH 989
Query: 417 SSFTELREFVQ 427
SS+ EL+ FVQ
Sbjct: 990 SSYLELQRFVQ 1000
>gi|428698111|pdb|4B87|A Chain A, Crystal Structure Of Human Dna Cross-Link Repair 1a
Length = 367
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 26 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGN 84
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L V YIHPL L+TE +++GVKV LL+ANHCPGA +I F L +G LHTGDFR
Sbjct: 85 LLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFR 144
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL + +V++LYLDTTYC+P+Y FPS+++V+ + + + P LVV
Sbjct: 145 ADPSMER-SLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 203
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T +L+H+LPM
Sbjct: 204 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 263
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +LK G +Y +LAFRPTGWT+S D+I P ++GNI+IYG+PYSEHS
Sbjct: 264 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI-PQTKGNISIYGIPYSEHS 322
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 323 SYLEMKRFVQ 332
>gi|395828054|ref|XP_003787201.1| PREDICTED: DNA cross-link repair 1A protein [Otolemur garnettii]
Length = 1042
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 157/321 (48%), Positives = 223/321 (69%), Gaps = 3/321 (0%)
Query: 107 STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH 166
S + ++ ++ ++CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++
Sbjct: 690 SESPNIGELRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF 749
Query: 167 GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQD 226
P+YCS +T L++ L V YIHPL ++TE V++GVKV LL+ANHCPGA +I F L +
Sbjct: 750 -PVYCSEITGNLLKNKLHVQEQYIHPLPMDTECVVNGVKVVLLDANHCPGAVMILFYLPN 808
Query: 227 GQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
G LHTGDFRA M+ LL +V+ LYLDTTYC+P+Y FPS+++V+ + +
Sbjct: 809 GTIILHTGDFRADPSMERS-LLAGQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINTAFEA 867
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
+ P LVV G YSIGKE VFLAI+ L K+ + + + L+ + PE++ + T
Sbjct: 868 VTLNPCALVVCGTYSIGKEKVFLAIADVLCSKVAMSQEKYKTLRCLNIPEINSLITTDMC 927
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNI 406
+L+H+LPM + F+ L+ +LK G +Y +LAFRPTGWT+S + + D+I P ++GNI
Sbjct: 928 SSLVHLLPMMQINFKDLQSHLKKCGGKYDQILAFRPTGWTHSNKLTSIADVI-PKTKGNI 986
Query: 407 TIYGVPYSEHSSFTELREFVQ 427
+IYG+PYSEHSS+ E++ FVQ
Sbjct: 987 SIYGIPYSEHSSYLEMKRFVQ 1007
>gi|355682943|gb|AER97011.1| DNA cross-link repair 1A [Mustela putorius furo]
Length = 504
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 159/337 (47%), Positives = 227/337 (67%), Gaps = 5/337 (1%)
Query: 92 LFSPPMKKLKASNGK-STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLT 150
L P +L+ N K + + ++ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLT
Sbjct: 138 LVKSPYGRLQRENSKIPESPNAGQLRTRTCPFYKKIPGTGFTVDAFQYGLVEGCTAYFLT 197
Query: 151 HFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLE 210
HFH DHY GL K ++ PIYCS +T L++ L + YIHPL ++TE +++G+KV LL+
Sbjct: 198 HFHSDHYAGLSKNFTF-PIYCSEITGNLLKSKLHIQKQYIHPLPMDTECIVNGIKVVLLD 256
Query: 211 ANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFP 270
ANHCPGA +I F L +G LHTGDFRA M+ L +++ LYLDTTYC+P+Y FP
Sbjct: 257 ANHCPGAVMILFHLPNGNVLLHTGDFRADPTMERS-RLAGQKIHTLYLDTTYCSPEYSFP 315
Query: 271 SKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
S+++V+ + + + P+ L+V G YSIGKE VFLAI+ LG K+ + + + LQ
Sbjct: 316 SQQEVIQFAINTAFEAVTLNPRVLIVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQ 375
Query: 331 SFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSET 390
+ PEL+ + T + +H+LPM + F+ L+ +LK G +Y +LAFRPTGWT+S
Sbjct: 376 CLNIPELNSFITTDMCSSRVHLLPMMQINFKALQSHLKKCGGKY-QILAFRPTGWTHSNK 434
Query: 391 VGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ D+I P ++GNI+IYG+PYSEHSS+ E++ FVQ
Sbjct: 435 LTRIADII-PQTKGNISIYGIPYSEHSSYLEMKRFVQ 470
>gi|120537811|gb|AAI29477.1| Dclre1a protein [Danio rerio]
Length = 431
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 156/308 (50%), Positives = 215/308 (69%), Gaps = 3/308 (0%)
Query: 120 CPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
CPFYKKIPGT F VDAF+YG ++G +AYFLTHFH DHYGGL K+ S PIYC+ +T+ LV
Sbjct: 75 CPFYKKIPGTGFAVDAFQYGVVEGVTAYFLTHFHSDHYGGL-KKDSAVPIYCNKVTSNLV 133
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ L V+ YIH L +NTE ++ GVKVTLL+ANHCPGA ++ F L DGQ LHTGDF+A
Sbjct: 134 KSKLKVDEQYIHVLPMNTECIVQGVKVTLLDANHCPGAVMLLFVLPDGQTVLHTGDFQAD 193
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
M+ YP L R+ LYLDTTYC+P+Y FP++++V+ + V + P+TLVV G
Sbjct: 194 PSMERYPELQGLRIQTLYLDTTYCSPEYTFPTQQEVVTFAVNTAFERVTLNPRTLVVCGT 253
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
YS+GKE VFLA+S+ L K+ + + + + ++ + T +HVLPM +
Sbjct: 254 YSVGKEKVFLAVSEVLSSKVCLSKDKYNTMCCLESEDIGQRITTNWQSAQVHVLPMMQIN 313
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSF 419
F+ L+ +LK + +Y ++AF+PTGWT+++TVG +D I P ++GNI+IYG+PYSEHSSF
Sbjct: 314 FKNLQTHLKKFSKKYDQLVAFKPTGWTFNQTVG--VDDILPQTQGNISIYGIPYSEHSSF 371
Query: 420 TELREFVQ 427
EL+ FVQ
Sbjct: 372 LELKRFVQ 379
>gi|354501727|ref|XP_003512940.1| PREDICTED: DNA cross-link repair 1A protein [Cricetulus griseus]
gi|344257217|gb|EGW13321.1| DNA cross-link repair 1A protein [Cricetulus griseus]
Length = 1022
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 213/310 (68%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK+IPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K + PIYCS +T
Sbjct: 681 RACPFYKRIPGTGFTVDAFQYGEVEGCTAYFLTHFHSDHYAGLSKDFER-PIYCSEITGN 739
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV+ L V YIH L ++TE ++DGVKV LL+ANHCPGA++I FR +G LHTGDFR
Sbjct: 740 LVKKKLRVQEQYIHQLPMDTECIVDGVKVVLLDANHCPGASMILFRPPNGAAILHTGDFR 799
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
A M+ LL +V+ LYLDTTYC+P+Y FPS+++V+ + + + P+ LVV
Sbjct: 800 ADPSMERS-LLAGQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVC 858
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G Y IGKE VFLAI+ LG K+ + + + L+ + P+++ + T +L+H+LPM
Sbjct: 859 GTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLKCLNLPDVNSLITTDMCSSLVHLLPMMQ 918
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F+ L+ +L+ +Y +LAFRPTGWT+S + + D I P +G I+IYG+PYSEHS
Sbjct: 919 INFKGLQSHLEKCDGKYDQILAFRPTGWTHSNRITSIAD-ITPQKKGKISIYGIPYSEHS 977
Query: 418 SFTELREFVQ 427
S+ E++ FVQ
Sbjct: 978 SYLEMKRFVQ 987
>gi|410896302|ref|XP_003961638.1| PREDICTED: DNA cross-link repair 1A protein-like [Takifugu
rubripes]
Length = 894
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 154/308 (50%), Positives = 208/308 (67%), Gaps = 2/308 (0%)
Query: 120 CPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
CPFYKKIPGT F +DAFRYG I+G +AYFLTHFH DHYGGL K S P+YC+ +T LV
Sbjct: 552 CPFYKKIPGTKFAIDAFRYGMIEGITAYFLTHFHSDHYGGLTKS-STFPVYCNKITGNLV 610
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ L V YIH L +NT+ ++GV V LLEANHCPGAA++ F L DGQ LHTGDFRA
Sbjct: 611 KSKLKVAEPYIHVLPMNTQVTVEGVTVVLLEANHCPGAAMLLFFLPDGQIVLHTGDFRAD 670
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
M+ YP L++ RV LYLDTTYC+P+Y FP++++V+N+ + P+TLVV G+
Sbjct: 671 PSMELYPELLSCRVQTLYLDTTYCSPEYTFPTQQEVINFAASTAFELVALNPRTLVVCGS 730
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
YS+GKE VF A++ LG K+ + + + + ++ + T +HVLPM L
Sbjct: 731 YSVGKEKVFFALADVLGSKVSLSRDKYNTMCCLESEQVKQCITTDWKAARVHVLPMMQLT 790
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSF 419
F+ L+ +L + +QY ++AF+PTGWT+S+ V + I P GNI+IYG+PYSEHSSF
Sbjct: 791 FKKLEQHLARFSSQYDQLVAFKPTGWTFSQQV-ESVGGIEPDVSGNISIYGIPYSEHSSF 849
Query: 420 TELREFVQ 427
E++ FVQ
Sbjct: 850 VEMKRFVQ 857
>gi|7595835|gb|AAF64472.1|AF241240_1 SNM1 protein [Mus musculus]
Length = 1023
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 216/312 (69%), Gaps = 3/312 (0%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
V R+CPFYK+IPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 680 VRRTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEIT 738
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
L++ L V YI L ++TE V+D VKV ++ANHCPGA +I F+L +G LHTGD
Sbjct: 739 GNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVFVDANHCPGATMILFQLPNGAVILHTGD 798
Query: 236 FRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
FRA M+ L +V+ L+LDTTYC+P+Y FPS+++V+ + + + P+ LV
Sbjct: 799 FRADPSMERS-RLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALV 857
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V G Y IGKE VFLAI+ LG K+ + + + LQ + PE+S + T D+L+H+LPM
Sbjct: 858 VCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPM 917
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
+ F+ L+ +LK G +Y +LAFRPTGWT+S + + D+I P +RGNI+IYG+PYSE
Sbjct: 918 MQINFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADII-PQTRGNISIYGIPYSE 976
Query: 416 HSSFTELREFVQ 427
HSS+ E++ FVQ
Sbjct: 977 HSSYLEMKRFVQ 988
>gi|390360524|ref|XP_796713.3| PREDICTED: DNA cross-link repair 1A protein-like
[Strongylocentrotus purpuratus]
Length = 602
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 151/302 (50%), Positives = 206/302 (68%), Gaps = 6/302 (1%)
Query: 129 TPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPS 188
T FTVDAFRYG I GC AYFL+HFHYDHYGGL K + +YCS +T LV L V
Sbjct: 252 TSFTVDAFRYGVIPGCKAYFLSHFHYDHYGGLTKHFDQ-QLYCSKVTGNLVISRLNVAAE 310
Query: 189 YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLL 248
Y+ L +N +DGV+VTLLEANHCPGA + ++L+ G YLHTGDFRA M+ YP L
Sbjct: 311 YVKILPMNEPCKVDGVEVTLLEANHCPGAVMFLYKLKSGVIYLHTGDFRADAEMELYPQL 370
Query: 249 VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVF 308
+ VN LYLDTTYC+P+YKFPS+ +V+ + V++ +K KTL+V Y+IGKE VF
Sbjct: 371 SSCHVNQLYLDTTYCDPQYKFPSQTEVIEFAVKIAVQAVKSNKKTLIVCATYTIGKEKVF 430
Query: 309 LAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL---LHVLPMSSLKFETLKD 365
AI++AL K+Y ++ + +VL+ + +L +L T+ N T LHV+ M+ L + LK+
Sbjct: 431 RAIAEALECKVYVDSRKLKVLECLEDDDLM-SLLTRDNKTSACGLHVIAMNMLNHQKLKE 489
Query: 366 YLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREF 425
YL + ++Y +LAF+PTGWT+S+ V + D I+P G TIYG+PYSEHSS++E++ F
Sbjct: 490 YLSQFSSRYDNILAFKPTGWTHSDKVESPSD-IKPSKSGKSTIYGIPYSEHSSYSEMKRF 548
Query: 426 VQ 427
VQ
Sbjct: 549 VQ 550
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 158/240 (65%), Gaps = 5/240 (2%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
+P T FTVDAFRYG I GC AYFL+HFHYDHYGGL K + +YCS +T LV + V
Sbjct: 1 MPDTSFTVDAFRYGVIPGCKAYFLSHFHYDHYGGLTKHFDQ-QLYCSKVTGNLVITRIKV 59
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSY 245
Y+ L +NT +DGV+VTLLEANHCPGA + ++L+ G YLHTGDFRA M+ Y
Sbjct: 60 AAEYVKILPMNTPCKVDGVEVTLLEANHCPGAVMFLYKLKSGVIYLHTGDFRADAEMELY 119
Query: 246 PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKE 305
P L + VN LYLDTTYC+P+YKFPS+ +V+ + V+ +K KTL+V Y+IGKE
Sbjct: 120 PQLSSCHVNQLYLDTTYCDPQYKFPSQTEVIEFAVKTAVQAVKSNKKTLIVCATYTIGKE 179
Query: 306 SVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL---LHVLPMSSLKFET 362
VF AI++AL K+Y ++ + +VL+ + +L +L T+ N LHV+ M+ L +
Sbjct: 180 KVFRAIAEALECKVYVDSRKLKVLECLEDDDLM-SLLTRDNKAATCRLHVIAMNMLNHQV 238
>gi|196013719|ref|XP_002116720.1| hypothetical protein TRIADDRAFT_31281 [Trichoplax adhaerens]
gi|190580698|gb|EDV20779.1| hypothetical protein TRIADDRAFT_31281 [Trichoplax adhaerens]
Length = 375
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 203/310 (65%), Gaps = 3/310 (0%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R CPFYKKI GT F VDAF YG I G +AYFL+HFH DHY GL K ++ +YC+ +TA
Sbjct: 38 RKCPFYKKITGTTFCVDAFSYGPISGITAYFLSHFHSDHYYGLNKTFN-AKLYCNKITAN 96
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV L V YI L ++ V+D V+VTLL+ANHCPG+A+ FRL++G +LHTGDFR
Sbjct: 97 LVSRMLHVEKQYITILPMHQSVVVDDVEVTLLDANHCPGSAMFVFRLRNGSVHLHTGDFR 156
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
AS M+ +L N ++ LYLDTTYC+P Y FPS++ VL+YV+ + LK + LV
Sbjct: 157 ASEEMEKLDILKNSVISELYLDTTYCDPSYDFPSQKFVLDYVLATVTDALKCNKRCLVAC 216
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G Y+IGKE VFLAI++AL K+YA ++ LQ + + + T LHVLP+ S
Sbjct: 217 GTYTIGKEKVFLAIARALECKVYAQKNKLGTLQCLEIENFKTLFTSDPHSTFLHVLPIWS 276
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + L++YL +Q+ + F+PTGWT++ V + R G+I+IYGVPYSEHS
Sbjct: 277 VSAKFLRNYLDQNADQFDCAIGFKPTGWTHTNNVTASGIVARQY--GSISIYGVPYSEHS 334
Query: 418 SFTELREFVQ 427
S++E+R FVQ
Sbjct: 335 SYSEMRRFVQ 344
>gi|340369565|ref|XP_003383318.1| PREDICTED: DNA cross-link repair 1A protein-like [Amphimedon
queenslandica]
Length = 556
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/306 (47%), Positives = 199/306 (65%), Gaps = 9/306 (2%)
Query: 123 YKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMC 182
+K IP T TVDAF YGSI GC++YFLTHFH DHY GL R++H IYCS +T L+
Sbjct: 209 HKWIPDTSITVDAFSYGSINGCTSYFLTHFHSDHYAGLNSRFAHD-IYCSKVTGNLIIQE 267
Query: 183 LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLM 242
L V +HPL L E +I+GV+VTLL+ANHCPG+ L+ F+L G+ LHTGDFR S M
Sbjct: 268 LKVKSDIVHPLPLKEEKLINGVQVTLLDANHCPGSVLLLFKLPSGKVILHTGDFRLSHSM 327
Query: 243 QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302
+ + ++ L+LDTTYC+ +Y FP ++DV+++VV + + K P TL+V GAY+I
Sbjct: 328 IDHNFFLTTPIDTLFLDTTYCSARYDFPPQDDVISFVVNIVLERMVKDPDTLIVCGAYTI 387
Query: 303 GKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNL-CTQGNDTLLHVLPMSSLKFE 361
GKE +F G + Y + R ++LQ + E+ + C + +HV+ ++ + E
Sbjct: 388 GKEKIF------TGCQCYVSKERYKILQCLESKEIMSVVNCHSPLASPIHVMSLNKMNVE 441
Query: 362 TLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTE 421
L YL+ Y Y ++LAF+PTGWT + T N L IRP+ RG +T+YGVPYSEHSSF+E
Sbjct: 442 ELTLYLRHYSTHYTSILAFKPTGWT-ATTKHNSLQDIRPVVRGVVTMYGVPYSEHSSFSE 500
Query: 422 LREFVQ 427
LR FVQ
Sbjct: 501 LRTFVQ 506
>gi|321476964|gb|EFX87923.1| hypothetical protein DAPPUDRAFT_41973 [Daphnia pulex]
Length = 350
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 195/313 (62%), Gaps = 3/313 (0%)
Query: 117 DRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
R CPFYK+IPGT F +DAF YG++ G S+YFL+H+HYDHY GLGK W P+YCS +TA
Sbjct: 3 SRKCPFYKRIPGTGFAIDAFSYGNVAGVSSYFLSHYHYDHYRGLGK-WLDKPLYCSQVTA 61
Query: 177 RLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
L+ + + + P + L LN VI+ ++V L++ANHCPG+ + FR G+ LH GDF
Sbjct: 62 NLINLKIKLKPGIVRVLPLNESRVIESIEVILIDANHCPGSVMFLFRFPTGKVVLHVGDF 121
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
RA M+ L ++ LYLDTTYC+ Y+ P++E+VL+Y+ RL + K K LV+
Sbjct: 122 RAHPSMERLYELKQRPIDELYLDTTYCDEHYELPAQEEVLSYIRRLVRRYALKYQKLLVI 181
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMS 356
G Y+IGKE VF+ ++ L K++A +RR+L D ++S L T + +HV+ M
Sbjct: 182 CGTYTIGKEKVFMMAAEELNSKVWAPTEKRRILNCLDDSKISSRLATSPLEASVHVVNMG 241
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-SETVGNQLDLIRPLSRGN-ITIYGVPYS 414
+K LK+YL + +LA PTGW Y + LD I P S N I I+GVPYS
Sbjct: 242 DVKPANLKNYLDSLSGSFTHILALNPTGWEYDGKMAAKGLDAISPKSYYNSIFIHGVPYS 301
Query: 415 EHSSFTELREFVQ 427
EHS F+E++ FV+
Sbjct: 302 EHSGFSEMKRFVR 314
>gi|326435694|gb|EGD81264.1| hypothetical protein PTSG_11300 [Salpingoeca sp. ATCC 50818]
Length = 699
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 210/342 (61%), Gaps = 11/342 (3%)
Query: 72 QANLFDMWGLKSNSESEANCLFSPPMKKLKAS-NGKSTATHLKKIVDRSCPFYKKIPGTP 130
+AN FD+ S E++ P M++ + +G +TH R CPFYK + T
Sbjct: 323 RANAFDVLMRASKREAQ-----QPLMRRGSSKESGSDASTHGLPRRLRQCPFYKWVKDTS 377
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190
FTVDAF YG+I C+AYFL+HFH DHY GL K + +YCS TARL + L V P +
Sbjct: 378 FTVDAFSYGAIPNCTAYFLSHFHADHYTGLTKSFP-AKVYCSEATARLCTLLLRVPPEKL 436
Query: 191 HPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVN 250
+PL +NT + GV V L++ANHCPGAA+I F L G+ ++HTGDFRA + + +
Sbjct: 437 NPLPMNTPVKVQGVTVELIDANHCPGAAVIVFTLPSGRRHVHTGDFRACEAIWQHTSIAG 496
Query: 251 HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLA 310
R++ +YLDTTYC+P+Y FPS+ VLN+V L LK+ P LVVVG+Y+IGKE VFL+
Sbjct: 497 KRIHTVYLDTTYCDPRYTFPSQYAVLNFVANLAIKYLKRHPHLLVVVGSYTIGKEKVFLS 556
Query: 311 ISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKP- 369
I++ALG ++YA+ ++++ L+ L + +HV MS++ + L Y +
Sbjct: 557 IARALGCRVYASTRKQQIFGCLQDDALNEVLTDNPLEAQVHVTSMSTVNLDNLARYYREG 616
Query: 370 YG--NQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIY 409
YG ++ VL FRPTGWT+S+ + L I+P ++ NIT+Y
Sbjct: 617 YGFRKRFEHVLGFRPTGWTHSQKL-PALSFIKPKTKRNITVY 657
>gi|328769438|gb|EGF79482.1| hypothetical protein BATDEDRAFT_1998, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 346
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/321 (45%), Positives = 201/321 (62%), Gaps = 19/321 (5%)
Query: 120 CPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
CP+YK I T FTVDAF YG I GC+AYFLTHFH DHYGGL K ++ GPIYCS +TA LV
Sbjct: 3 CPWYKHISETSFTVDAFCYGVIPGCTAYFLTHFHSDHYGGLKKSFNSGPIYCSHITANLV 62
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR------LQDGQCYLHT 233
L V+ S +H + LNT I G++VT ++ANHCPG+ +I F +Q+ + LHT
Sbjct: 63 AQQLGVDRSMLHTIPLNTRTEIQGIQVTFIDANHCPGSVIILFEIPSVDAMQNNRNVLHT 122
Query: 234 GDFRASRLMQSYPLLVNH---RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
GDFR ++P ++ R++ +YLDTTYCNPKY FP ++ V+ ++R
Sbjct: 123 GDFRVHSSHFTHPSFLSKPLIRLDEIYLDTTYCNPKYIFPLQDAVIASILR------PPL 176
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
K LVVVG Y+IGKE VFLA+SKA+ KIYA+A++RRVL + P+L + +Q + +
Sbjct: 177 CKILVVVGTYTIGKEKVFLAMSKAISSKIYADATKRRVLACLEDPDLDRLVVSQPEEANV 236
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS----RGNI 406
H+ M L +L+ L Y ++ +++A RPTGWT+ + I L NI
Sbjct: 237 HLCTMMQLNKTSLEGMLDKYKGRFTSIIAVRPTGWTFQKLKSPSQFSIASLKPRWLSPNI 296
Query: 407 TIYGVPYSEHSSFTELREFVQ 427
T+ +PYSEHSSF EL+ FVQ
Sbjct: 297 TLIPLPYSEHSSFEELKCFVQ 317
>gi|258575265|ref|XP_002541814.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902080|gb|EEP76481.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 828
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 208/388 (53%), Gaps = 75/388 (19%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K+ +R+CPFYK +PG VDAFRYG+++GCSAYFL+HFH DHY GL WSHGPIYCS
Sbjct: 391 KQAFERTCPFYKILPGFSICVDAFRYGAVEGCSAYFLSHFHSDHYVGLNSNWSHGPIYCS 450
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC 229
+T LVR L VNP ++ L+ + DGVKVT++ ANHCPG+AL F + GQ
Sbjct: 451 KVTGNLVRQQLNVNPKFVVDLDFEKPTDVPDTDGVKVTMIHANHCPGSALFLFEKKFGQG 510
Query: 230 -------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
LH GDFRAS +PLL R++V YLDTTY NPKY FP
Sbjct: 511 KGQRVQRILHCGDFRASPAHIQHPLLRPDPIDQATGQPKQQRIDVCYLDTTYLNPKYAFP 570
Query: 271 SKEDVLNYVVRLTKN-------CL------KKQPKT------------------LVVVGA 299
S++DV++ ++ N C K PK LVV+G
Sbjct: 571 SQQDVIDACAQMCVNLNENKSGCRDLWQRGKSMPKDSKEPHVNGKPTETSKSRLLVVIGT 630
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
YSIGKE + L I+KALG KI+A A+++R+ + PELS L + + +H+ + ++
Sbjct: 631 YSIGKERICLGIAKALGCKIFATAAKQRICACLEDPELSSLLTSDPLEAQVHMHSLMEIR 690
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD-----------------LIRPL- 401
+TL +YL + + V+ FRPTGW Y G +D ++ L
Sbjct: 691 SDTLSEYLASFKPHFTHVVGFRPTGWNYRPPTGRMVDNPAVSTVLQSESWKTRFTVKDLV 750
Query: 402 ----SRGNITIYGVPYSEHSSFTELREF 425
S + + +GVPYSEHSSF EL F
Sbjct: 751 PQRGSNKDSSCFGVPYSEHSSFRELTMF 778
>gi|356518191|ref|XP_003527765.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
Length = 678
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 200/314 (63%), Gaps = 8/314 (2%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKG-CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
R P + + GTPF VDAF+Y ++G CS +FLTHFH DHY GL K ++HG IYCS +TA
Sbjct: 343 RDVPKWCAVQGTPFRVDAFKY--LRGDCSHWFLTHFHLDHYQGLTKSFNHGKIYCSSVTA 400
Query: 177 RLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
RLV M + + +H L LN + I GV VT L+ANHCPG+ +I F+ +G+ LHTGDF
Sbjct: 401 RLVNMNIGIPYDKLHVLPLNQKVEIAGVDVTCLDANHCPGSIIILFQPPNGKAVLHTGDF 460
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
R S M PL+ +N L LDTTYCNP+Y FP +E V+ +V+ + PKTL +
Sbjct: 461 RFSEEMAVNPLMRICPINTLILDTTYCNPQYDFPKQESVIQFVIDAVQ-AETFNPKTLFL 519
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG-NDTLLHVLPM 355
+G+Y+IGKE +FL ++++L K++ A++ R+L+ + E T +++ +HV PM
Sbjct: 520 IGSYTIGKERLFLEVARSLRKKVHVTAAKLRILKCLELKEEDMQWFTSNEHESNIHVAPM 579
Query: 356 SSL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYS 414
+L F+ LK Y +QY ++AF PTGWT+ + G + R +G I Y VPYS
Sbjct: 580 WTLASFKRLKHISSQYKSQYNLIVAFSPTGWTFGK--GKKKSTGRRWQQGTIIRYEVPYS 637
Query: 415 EHSSFTELREFVQV 428
EHSSFTEL+EFV+V
Sbjct: 638 EHSSFTELKEFVRV 651
>gi|119194063|ref|XP_001247635.1| hypothetical protein CIMG_01406 [Coccidioides immitis RS]
gi|392863120|gb|EAS36170.2| DNA repair protein Pso2/Snm1 [Coccidioides immitis RS]
Length = 840
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 206/391 (52%), Gaps = 78/391 (19%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K+ +R+CPFYK +PG VDAFRYG+++GC+AYFL+HFH DHY GL WSHGPIYCS
Sbjct: 400 KQAYERTCPFYKILPGFSICVDAFRYGAVEGCNAYFLSHFHSDHYIGLNSNWSHGPIYCS 459
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC 229
+T LVR L VNP +I LE + GV+VT++ ANHCPG++L F GQ
Sbjct: 460 KVTGNLVRQQLKVNPKFIVDLEFEKPFEVPETGGVRVTMIPANHCPGSSLFLFERVFGQG 519
Query: 230 -------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
LH GDFRAS +PL+ R++V YLDTTY NPKY FP
Sbjct: 520 KARRFQRVLHCGDFRASPAHIQHPLIRPDAVDPVTGQPKQQRIDVCYLDTTYLNPKYAFP 579
Query: 271 SKEDVLNYVVRL----------------------------------TKNCLKKQPKTLVV 296
S+EDV+N R+ K +P+ LVV
Sbjct: 580 SQEDVVNACARMCVSLNENKPGHHDIWKRGKANGEDLDEKDNSGNNAKASGNPKPRLLVV 639
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMS 356
+G YSIGKE + L I+KAL KI+A A+++R+ + PELS L + + +H+ +
Sbjct: 640 IGTYSIGKERICLGIAKALNCKIFATAAKQRICACLEDPELSSLLTSDPLEAQVHMHSLM 699
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD------LIRPLS-------- 402
++ +TL +YL + + ++ FRPTGW Y G +D ++R S
Sbjct: 700 EIRVDTLSEYLSSFKPHFTHIVGFRPTGWNYRPPAGRMIDNPSVSTVLRSESWKARFTVN 759
Query: 403 -----RGN---ITIYGVPYSEHSSFTELREF 425
RG+ + +GVPYSEHSSF EL F
Sbjct: 760 DLVPQRGSNKQSSCFGVPYSEHSSFRELTMF 790
>gi|303311571|ref|XP_003065797.1| DNA repair metallo-beta-lactamase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240105459|gb|EER23652.1| DNA repair metallo-beta-lactamase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 840
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 206/391 (52%), Gaps = 78/391 (19%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K+ +R+CPFYK +PG VDAFRYG+++GC+AYFL+HFH DHY GL WSHGPIYCS
Sbjct: 400 KQAYERTCPFYKILPGFSICVDAFRYGAVEGCNAYFLSHFHSDHYIGLNSNWSHGPIYCS 459
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC 229
+T LVR L VNP +I LE + GV+VT++ ANHCPG++L F GQ
Sbjct: 460 KVTGNLVRQQLKVNPKFIVDLEFEKPFEVPETGGVRVTMIPANHCPGSSLFLFEKVFGQG 519
Query: 230 -------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
LH GDFRAS +PL+ R++V YLDTTY NPKY FP
Sbjct: 520 KARRYQRVLHCGDFRASPAHIQHPLIRPDAVDPVTGQPKQQRIDVCYLDTTYLNPKYAFP 579
Query: 271 SKEDVLNYVVRL----------------------------------TKNCLKKQPKTLVV 296
S+EDV+N R+ K +P+ LVV
Sbjct: 580 SQEDVVNACARMCMSLNENKPGHHDIWKRGKANGEDLDEKDNSGNNAKAGGNPKPRLLVV 639
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMS 356
+G YSIGKE + L I+KAL KI+A A+++R+ + PELS L + + +H+ +
Sbjct: 640 IGTYSIGKERICLGIAKALNCKIFATAAKQRICACLEDPELSSLLTSDPLEAQVHMHSLM 699
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD------LIRPLS-------- 402
++ +TL +YL + + ++ FRPTGW Y G +D ++R S
Sbjct: 700 EIRVDTLSEYLSSFKPHFTHIVGFRPTGWNYRPPAGRMIDNPLVSTVLRSESWKARFTVN 759
Query: 403 -----RGN---ITIYGVPYSEHSSFTELREF 425
RG+ + +GVPYSEHSSF EL F
Sbjct: 760 DLVPQRGSNKQSSCFGVPYSEHSSFRELTMF 790
>gi|320039680|gb|EFW21614.1| DNA cross-link repair protein pso2/snm1 [Coccidioides posadasii
str. Silveira]
Length = 840
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 206/391 (52%), Gaps = 78/391 (19%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K+ +R+CPFYK +PG VDAFRYG+++GC+AYFL+HFH DHY GL WSHGPIYCS
Sbjct: 400 KQAYERTCPFYKILPGFSICVDAFRYGAVEGCNAYFLSHFHSDHYIGLNSNWSHGPIYCS 459
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC 229
+T LVR L VNP +I LE + GV+VT++ ANHCPG++L F GQ
Sbjct: 460 KVTGNLVRQQLKVNPKFIVDLEFEKPFEVPETGGVRVTMIPANHCPGSSLFLFEKVFGQG 519
Query: 230 -------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
LH GDFRAS +PL+ R++V YLDTTY NPKY FP
Sbjct: 520 KARRYQRVLHCGDFRASPAHIQHPLIRPDAVDPVTGQPKQQRIDVCYLDTTYLNPKYAFP 579
Query: 271 SKEDVLNYVVRL----------------------------------TKNCLKKQPKTLVV 296
S+EDV+N R+ K +P+ LVV
Sbjct: 580 SQEDVVNACARMCMSLNENKPGHHDIWKRGKANGEDLNEKDNSGNNAKAGGNPKPRLLVV 639
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMS 356
+G YSIGKE + L I+KAL KI+A A+++R+ + PELS L + + +H+ +
Sbjct: 640 IGTYSIGKERICLGIAKALNCKIFATAAKQRICACLEDPELSSLLTSDPLEAQVHMHSLM 699
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD------LIRPLS-------- 402
++ +TL +YL + + ++ FRPTGW Y G +D ++R S
Sbjct: 700 EIRVDTLSEYLSSFKPHFTHIVGFRPTGWNYRPPAGRMIDNPLVSTVLRSESWKARFTVN 759
Query: 403 -----RGN---ITIYGVPYSEHSSFTELREF 425
RG+ + +GVPYSEHSSF EL F
Sbjct: 760 DLVPQRGSNKQSSCFGVPYSEHSSFRELTMF 790
>gi|348687557|gb|EGZ27371.1| hypothetical protein PHYSODRAFT_472505 [Phytophthora sojae]
Length = 569
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 218/381 (57%), Gaps = 32/381 (8%)
Query: 70 LKQANLFDMWGLKSNSESEANCLFSP-PMKKLKASNGKSTATHLKKIVDRSCPFYKKIPG 128
++++N+FD+ S +E+ N P P K + + + + P +K I G
Sbjct: 178 IERSNVFDVLMRGSKTEAVLNARKRPVPFKFTRKAVQRRRLLY---------PEFKCIRG 228
Query: 129 T--PFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVN 186
T PF VD F+Y + S YFLTHFH DHYGGL K + G IYC+ +TA+LV L V
Sbjct: 229 TNPPFIVDGFQYACKQNSSIYFLTHFHSDHYGGLDKHFDCGIIYCNEITAKLVVQELGVL 288
Query: 187 PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYP 246
Y+HP+ +NT ++ V+VT ++ANHCPG+A+I FRL+DG+ YLHTGDFR R M Y
Sbjct: 289 SKYVHPVGMNTPVLVGDVQVTFMDANHCPGSAIILFRLKDGKTYLHTGDFRFHRKMLDYH 348
Query: 247 LLVNH------------------RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
L H R++ +YLDTTYC+PKY FP+++ +N+ + L
Sbjct: 349 ALQPHIATGDEKIDHNGKIVGLSRLDGVYLDTTYCDPKYTFPTQQVAVNHALELMDKHF- 407
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGN-LCTQGND 347
KQ K L + G+Y+IGKE +F+ +++ K+ + ++ +++++F WP L T+
Sbjct: 408 KQEKVLYLFGSYTIGKERLFMEVARKFQKKVCVSKAKLKIIETFGWPAKDMQLLTTEPGA 467
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNIT 407
T LHV+ M L+ + L L + ++ ++AFRPTGWT+S + G I
Sbjct: 468 TNLHVVRMQDLQMDNLTVLLAKHRLRFRRIVAFRPTGWTFSSKNPRSISTCCTDPSGKIH 527
Query: 408 IYGVPYSEHSSFTELREFVQV 428
+YG+PYSEHSSF EL +FVQV
Sbjct: 528 VYGIPYSEHSSFAELCDFVQV 548
>gi|195568456|ref|XP_002102232.1| GD19792 [Drosophila simulans]
gi|194198159|gb|EDX11735.1| GD19792 [Drosophila simulans]
Length = 768
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 131/328 (39%), Positives = 198/328 (60%), Gaps = 13/328 (3%)
Query: 103 SNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK 162
+ + T K+ + CP YK + GT F VD F++G I+G + YFLTHFH DHY GL K
Sbjct: 252 AKNSTKGTGRKQRKPKPCPPYKVVEGTSFCVDGFQFGEIEGVTHYFLTHFHADHYIGLTK 311
Query: 163 RWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHF 222
++ H P+Y SP TARLVR + ++ ++IH ++++ +DGV+VT LEANHCPGA + F
Sbjct: 312 KFCH-PLYVSPTTARLVRTFIKLDETHIHEIDVDQTLDVDGVQVTALEANHCPGALMFFF 370
Query: 223 RLQDGQCYLHTGDFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVR 281
+L G+C LHTGDFRAS M+S P+ NH +++LYLDTTY N Y F + + ++ V
Sbjct: 371 KLSSGECILHTGDFRASADMESLPIFWNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAVE 430
Query: 282 LTKNCLKKQP--KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSG 339
L + L+K + L+V G+Y IGKE ++LA++K +K++ ++R ++ +WP+L
Sbjct: 431 LVRAFLEKNAAKRILIVCGSYVIGKEKIWLALAKEFTMKVWTESNRSNAVRCLNWPDLDS 490
Query: 340 NLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIR 399
L LHV+ M + + +L DY + +QY +L RP+GW + +
Sbjct: 491 VLTEDRRGANLHVIAMGKISYPSLVDYFTEFEDQYDMLLGIRPSGWEKNS---------K 541
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFVQ 427
P I+ G+ YSEHSS+ EL FV+
Sbjct: 542 PSYGKRISTIGIEYSEHSSYKELERFVR 569
>gi|359475989|ref|XP_002280362.2| PREDICTED: uncharacterized protein LOC100256089 [Vitis vinifera]
Length = 842
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 196/312 (62%), Gaps = 6/312 (1%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R P + IPGTPF VDAFRY + CS +FLTHFH DHY GL + + HG IYCS +TAR
Sbjct: 507 RDLPLWCCIPGTPFRVDAFRYLR-RDCSHWFLTHFHLDHYQGLTRSFCHGKIYCSAITAR 565
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV M + + + L LN + IDGV VT L+ANHCPG+ +I F +G+ LHTGDFR
Sbjct: 566 LVNMKIGIPWDRLQILPLNQKINIDGVDVTCLDANHCPGSIIILFEPSNGKAVLHTGDFR 625
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
S M S +L ++ L LDTTYCNP+Y FP +E V+ +V+ + P+TL ++
Sbjct: 626 FSEEMTSMSVLQMCPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQ-AEAFNPRTLFLI 684
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCT-QGNDTLLHVLPMS 356
G+Y+IGKE +FL +++ L K+Y NA++ +L+ ++ + T ++ +HV+PM
Sbjct: 685 GSYTIGKERLFLEVARVLRKKVYVNAAKLHILECLEFQKEDMQWFTLNEQESHIHVVPMW 744
Query: 357 SL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
+L F+ LK Y +++ ++AF PTGWT+ + G + R +G I Y VPYSE
Sbjct: 745 TLASFKRLKHISNQYAGRFSLIVAFSPTGWTFGK--GKKKTPGRRWQQGTIIRYEVPYSE 802
Query: 416 HSSFTELREFVQ 427
HSSFTELREFV+
Sbjct: 803 HSSFTELREFVK 814
>gi|296081740|emb|CBI20745.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 196/312 (62%), Gaps = 6/312 (1%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R P + IPGTPF VDAFRY + CS +FLTHFH DHY GL + + HG IYCS +TAR
Sbjct: 388 RDLPLWCCIPGTPFRVDAFRYLR-RDCSHWFLTHFHLDHYQGLTRSFCHGKIYCSAITAR 446
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV M + + + L LN + IDGV VT L+ANHCPG+ +I F +G+ LHTGDFR
Sbjct: 447 LVNMKIGIPWDRLQILPLNQKINIDGVDVTCLDANHCPGSIIILFEPSNGKAVLHTGDFR 506
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
S M S +L ++ L LDTTYCNP+Y FP +E V+ +V+ + P+TL ++
Sbjct: 507 FSEEMTSMSVLQMCPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQ-AEAFNPRTLFLI 565
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCT-QGNDTLLHVLPMS 356
G+Y+IGKE +FL +++ L K+Y NA++ +L+ ++ + T ++ +HV+PM
Sbjct: 566 GSYTIGKERLFLEVARVLRKKVYVNAAKLHILECLEFQKEDMQWFTLNEQESHIHVVPMW 625
Query: 357 SL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
+L F+ LK Y +++ ++AF PTGWT+ + G + R +G I Y VPYSE
Sbjct: 626 TLASFKRLKHISNQYAGRFSLIVAFSPTGWTFGK--GKKKTPGRRWQQGTIIRYEVPYSE 683
Query: 416 HSSFTELREFVQ 427
HSSFTELREFV+
Sbjct: 684 HSSFTELREFVK 695
>gi|224092047|ref|XP_002309453.1| predicted protein [Populus trichocarpa]
gi|222855429|gb|EEE92976.1| predicted protein [Populus trichocarpa]
Length = 740
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 200/325 (61%), Gaps = 8/325 (2%)
Query: 106 KSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKG-CSAYFLTHFHYDHYGGLGKRW 164
+ + KK + P + IPGTPF VDAF+Y ++G CS +FLTHFH DHY GL + +
Sbjct: 393 QGVKNYTKKGKFKDIPLWCSIPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSF 450
Query: 165 SHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL 224
HG IYCS +TA+LV + + + +H L LN + I GV VT L+ANHCPG+ +I F
Sbjct: 451 CHGKIYCSLITAKLVNLKIGIPWDSLHVLPLNQKICIAGVDVTCLDANHCPGSIIILFEP 510
Query: 225 QDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTK 284
+G+ LHTGDFR S M + P+L ++ L LDTTYCN +Y FP +E V+ +V+ +
Sbjct: 511 PNGKAVLHTGDFRFSEKMVTMPVLQMSSIHTLILDTTYCNAQYDFPKQEAVIQFVIEAIQ 570
Query: 285 NCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCT- 343
PKTL ++G+Y+IGKE +FL +++ L K+Y N ++ R+L+ +PE T
Sbjct: 571 -AEAFNPKTLFLIGSYTIGKERLFLEVARVLHKKVYVNMAKFRLLECLGFPEEDMRWITL 629
Query: 344 QGNDTLLHVLPMSSL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS 402
++ +HV+PM +L F+ LK Y ++ ++AF PTGWT+ + G + R
Sbjct: 630 NEQESHIHVVPMWTLASFKRLKHLSSQYAGRFTLIVAFSPTGWTFGK--GKKKSPGRRCQ 687
Query: 403 RGNITIYGVPYSEHSSFTELREFVQ 427
+G I Y VPYSEH SFTELREFV+
Sbjct: 688 QGTIIRYEVPYSEHCSFTELREFVK 712
>gi|21357063|ref|NP_649548.1| Snm1 [Drosophila melanogaster]
gi|7296732|gb|AAF52011.1| Snm1 [Drosophila melanogaster]
gi|16198055|gb|AAL13814.1| LD28027p [Drosophila melanogaster]
gi|220945898|gb|ACL85492.1| Snm1-PA [synthetic construct]
gi|220955582|gb|ACL90334.1| Snm1-PA [synthetic construct]
Length = 763
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 195/313 (62%), Gaps = 13/313 (4%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CP YK + GT F VD F++G I+G + YFLTHFH DHY GL K++ H P+Y SP++AR
Sbjct: 262 KPCPPYKVVEGTSFCVDGFQFGEIEGVTHYFLTHFHADHYIGLTKKFCH-PLYVSPISAR 320
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LVR + ++ ++IH ++++ +DGV+VT LEANHCPGA + F+L G+C LHTGDFR
Sbjct: 321 LVRTFIKLDETHIHEIDVDQTLDVDGVQVTALEANHCPGALMFFFKLSSGECILHTGDFR 380
Query: 238 ASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP--KTL 294
AS M+S P+ NH +++LYLDTTY N Y F + + ++ V L + L+K + L
Sbjct: 381 ASADMESLPIFWNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAVDLVRAFLEKNAAKRIL 440
Query: 295 VVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLP 354
+V G+Y IGKE ++LA++K ++++ ++R ++ +WP+L L + LHV+
Sbjct: 441 IVCGSYVIGKEKIWLALAKEFTMRVWTESNRSTAVRCLNWPDLDSVLTEDRSGANLHVIA 500
Query: 355 MSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYS 414
M + + +L DY + +QY +L RP+GW + +P I+ G+ YS
Sbjct: 501 MGKISYPSLVDYFTEFEDQYDMLLGIRPSGWEKNS---------KPSYGKRISTIGIEYS 551
Query: 415 EHSSFTELREFVQ 427
EHSS+ EL FV+
Sbjct: 552 EHSSYKELERFVR 564
>gi|194767629|ref|XP_001965917.1| GF11594 [Drosophila ananassae]
gi|190619760|gb|EDV35284.1| GF11594 [Drosophila ananassae]
Length = 676
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 149/422 (35%), Positives = 231/422 (54%), Gaps = 36/422 (8%)
Query: 32 NDDDDDDDEEEEEKEES-------FADDFYRCGTDWSCLLQTERKLKQANLFDMWGLKSN 84
++DDD+ +EEE+ S A + + S E + +L M S+
Sbjct: 180 SEDDDERTIKEEERTPSPVKASKQVAISDQKTNSASSKPTSPEGSNRSMSLLGMGSNVSS 239
Query: 85 SESEANCLFSPPMKKLK---------ASNGKST-------ATHLKKIVDRSCPFYKKIPG 128
+ L S P +K K ++N K AT+ K+ + CP YK + G
Sbjct: 240 PDIGQGLLRSTPSRKTKEIKKPKTPPSTNSKRIKKPTTPPATNSKQRKPKPCPPYKVVEG 299
Query: 129 TPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPS 188
T F VD F++G + G + YFLTH+H DHY GL K++SH P+Y SP+TARLVR+ + V+
Sbjct: 300 TTFCVDGFQFGDVAGVTHYFLTHYHADHYIGLTKKFSH-PLYMSPITARLVRLFIKVDEK 358
Query: 189 YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLL 248
YIH ++++ ++D V+VT +EANHCPGA + F+L G+C LHTGDFRA M+S PL
Sbjct: 359 YIHEIDVDETVMVDNVEVTAIEANHCPGAVMFFFKLSSGECILHTGDFRACSEMESLPLF 418
Query: 249 VNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP--KTLVVVGAYSIGKE 305
N+ +++LYLDTTY N Y F + + ++ + L ++K P + L+V G+Y IGKE
Sbjct: 419 WNNTNIDLLYLDTTYLNKNYNFCHQSESVDRALHLVGAFIEKNPFKRILIVCGSYVIGKE 478
Query: 306 SVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKD 365
++LA+++A +K++ +SR + W +L L LHV+PM + + +L +
Sbjct: 479 KIWLALAEAFSLKVWTESSRSDAISCLGWDDLQVVLTDDPTKANLHVIPMGKISYPSLVE 538
Query: 366 YLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREF 425
Y + +QY +L RP+GW + +P I+ G+ YSEHSS+ EL F
Sbjct: 539 YFSQFEDQYDMLLGIRPSGWEKNS---------KPSFGKKISTIGIEYSEHSSYKELERF 589
Query: 426 VQ 427
V+
Sbjct: 590 VR 591
>gi|212544306|ref|XP_002152307.1| DNA repair protein Pso2/Snm1, putative [Talaromyces marneffei ATCC
18224]
gi|210065276|gb|EEA19370.1| DNA repair protein Pso2/Snm1, putative [Talaromyces marneffei ATCC
18224]
Length = 826
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/396 (39%), Positives = 209/396 (52%), Gaps = 79/396 (19%)
Query: 109 ATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP 168
A+ K+ +R+CPFYK +PG TVDAFRYG+++GC AYFL+HFH DHYGGL WSHGP
Sbjct: 383 ASRGKQAYERTCPFYKILPGLFITVDAFRYGAVEGCQAYFLSHFHSDHYGGLTGSWSHGP 442
Query: 169 IYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR-- 223
IYCS +T LVR L V+P Y+ LE + + GV VT+L ANHCPG++L F
Sbjct: 443 IYCSRVTGNLVRQQLKVDPKYVVDLEFEKKTEVPNTKGVYVTMLPANHCPGSSLFLFEKI 502
Query: 224 LQDGQCY--LHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKF 269
+ +G+ + LH GDFRA +PLL R++V YLDTTY NPKY F
Sbjct: 503 MDNGRIHRVLHCGDFRACPAHVQHPLLKPDILDAKSGQSRQQRLDVCYLDTTYLNPKYSF 562
Query: 270 PSKEDVL-----------------NYVVRLTK-----------NCLKKQP---------- 291
P + DV+ N V+ L K + +K+P
Sbjct: 563 PPQADVISACADMCVRLSNEQGDRNEVLELHKHEKADAMAKFLSSKEKEPISTSTPTSRG 622
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
+ LVV+G YSIGKE + L I++AL KIYA ++R+ + PELS L + +H
Sbjct: 623 RLLVVIGTYSIGKERICLGIARALKCKIYAPPQKQRICACLEDPELSSLLTDNPLEAQIH 682
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD--------------- 396
+ + ++ ETL DYL+ + ++ V+ FRPTGWTY G LD
Sbjct: 683 MQIVFEIRAETLSDYLQSFKGHFSRVVGFRPTGWTYRPPGGRLLDNPPVANVLHSSNWKT 742
Query: 397 -------LIRPLSRGNITIYGVPYSEHSSFTELREF 425
+ + S + +GVPYSEHSSF EL F
Sbjct: 743 SFSVSDLVPQRGSNKEASCFGVPYSEHSSFRELTMF 778
>gi|301092745|ref|XP_002997225.1| DNA cross-link repair protein, putative [Phytophthora infestans
T30-4]
gi|262111496|gb|EEY69548.1| DNA cross-link repair protein, putative [Phytophthora infestans
T30-4]
Length = 565
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 215/381 (56%), Gaps = 32/381 (8%)
Query: 70 LKQANLFDMWGLKSNSESEANCLFSP-PMKKLKASNGKSTATHLKKIVDRSCPFYKKIPG 128
++++N+FD+ S + + N P P K + + + + P +K I G
Sbjct: 164 MERSNVFDLLMRSSKTAAVLNARKRPVPFKFTRKAIQRRRLLY---------PDFKCIQG 214
Query: 129 T--PFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVN 186
T PF VD F+Y + S YFLTHFH DHYGGL K + G IYC+ +TARLV L V
Sbjct: 215 TDPPFIVDGFQYACKENSSIYFLTHFHSDHYGGLTKNFDCGIIYCNEITARLVVQELGVQ 274
Query: 187 PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYP 246
YIH + +NT + GV+VT ++ANHCPG+A+I FRL+DG+ +LHTGDFR +R M Y
Sbjct: 275 SKYIHAVGMNTPVFVAGVQVTFMDANHCPGSAIILFRLKDGKTFLHTGDFRFNRKMLEYH 334
Query: 247 LLVNH------------------RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
L +H R++ +YLDTTYCNPKY FP+++ +++ + L
Sbjct: 335 ALQSHIPTGSETIDHNGKIVGLNRLDGVYLDTTYCNPKYTFPTQQVAIDHALELIDKHF- 393
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQ-GND 347
KQ K L + G+Y+IGKE +F+ I++ K+ + ++ +++++F W L T
Sbjct: 394 KQDKVLYLFGSYTIGKERLFMEIARKFQKKVCVSKTKLKIIETFGWHSQEMKLLTTVPTA 453
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNIT 407
T LHV+ M L+ + L L ++ ++AFRPTGWT+S + G I
Sbjct: 454 TNLHVVRMQDLQMDNLIVLLAKNRLRFHRIVAFRPTGWTFSGKNPRSISTCCTDPSGKIY 513
Query: 408 IYGVPYSEHSSFTELREFVQV 428
+YG+PYSEHSSF EL +FVQV
Sbjct: 514 VYGIPYSEHSSFAELCDFVQV 534
>gi|255550227|ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223544650|gb|EEF46166.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 737
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/313 (43%), Positives = 198/313 (63%), Gaps = 8/313 (2%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKG-CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
+ P + IPGTPF VDAF+Y ++G CS +FLTHFH DHY GL + + HG IYCS +TA
Sbjct: 402 KDIPLWCSIPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSLITA 459
Query: 177 RLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
RLV M + + + L LN + I GV VT L+ANHCPG+ ++ F +G+ LHTGDF
Sbjct: 460 RLVNMKIGIPWDRLQVLPLNKKISIAGVDVTCLDANHCPGSIIVLFEPPNGKAVLHTGDF 519
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
R M S L R++ L LDTTYCNP+Y FP +E V+ +V+ + PKTL +
Sbjct: 520 RFCENMASMTALQMCRIHTLILDTTYCNPQYDFPKQEAVIQFVIEAIQ-AESFNPKTLFL 578
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCT-QGNDTLLHVLPM 355
+G+Y+IGKE +FL +++ L K+Y A++ R+L+S + + + T +++ +HV+PM
Sbjct: 579 IGSYTIGKERLFLEVARVLRRKVYVTAAKFRLLESLGFSKEAMQWFTLNEHESQIHVVPM 638
Query: 356 SSL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYS 414
+L F+ LK Y ++++ +++F PTGWT+ + G + R +G I Y VPYS
Sbjct: 639 WTLASFKRLKHISNQYASRFSPIVSFSPTGWTFGK--GKKKSPGRRWQQGTIIRYEVPYS 696
Query: 415 EHSSFTELREFVQ 427
EH SFTELREFV+
Sbjct: 697 EHCSFTELREFVK 709
>gi|297828291|ref|XP_002882028.1| sterile alpha motif domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327867|gb|EFH58287.1| sterile alpha motif domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/309 (44%), Positives = 195/309 (63%), Gaps = 8/309 (2%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
P + IPGTPF VDAF+Y + + C +FLTHFH DHY GL K +SHG IYCS +TA+LV
Sbjct: 391 PHWNCIPGTPFRVDAFKYLT-RDCCHWFLTHFHLDHYQGLTKSFSHGKIYCSLVTAKLVN 449
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
M + + + L+L + I G+ VT +ANHCPG+ +I F +G+ LHTGDFR S
Sbjct: 450 MKIGIPWERLQVLDLGQKVNIAGIDVTCFDANHCPGSIMILFEPTNGKAVLHTGDFRYSE 509
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
M + L+ ++N L LDTTYCNP+Y FP +E V+ +VV + PKTL ++G+Y
Sbjct: 510 EMSDW--LIGSQINSLILDTTYCNPQYDFPKQEAVIQFVVEAIQ-AEAFNPKTLFLIGSY 566
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCT-QGNDTLLHVLPMSSL- 358
+IGKE +FL +++ L KIY N S+ ++L+ + + T + ++ +HV+P+ +L
Sbjct: 567 TIGKERLFLEVARVLREKIYINPSKLKLLECLGFSKEDMQWFTVKEEESHIHVVPLWTLA 626
Query: 359 KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSS 418
F+ LK Y N+Y+ ++ F PTGWT S+T R L +G I Y VPYSEHSS
Sbjct: 627 SFKRLKHIANRYTNRYSLIVTFSPTGWTSSKTKKKSPG--RRLQQGTIIRYEVPYSEHSS 684
Query: 419 FTELREFVQ 427
FTEL+EFVQ
Sbjct: 685 FTELKEFVQ 693
>gi|71002352|ref|XP_755857.1| DNA repair protein Pso2/Snm1 [Aspergillus fumigatus Af293]
gi|66853495|gb|EAL93819.1| DNA repair protein Pso2/Snm1, putative [Aspergillus fumigatus
Af293]
gi|159129914|gb|EDP55028.1| DNA repair protein Pso2/Snm1, putative [Aspergillus fumigatus
A1163]
Length = 850
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 157/403 (38%), Positives = 205/403 (50%), Gaps = 86/403 (21%)
Query: 109 ATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP 168
A+ K+ R+CPFYK +P VDAFRYG+++GC+AYFL+H+H DHY GL W HGP
Sbjct: 400 ASRGKQAYQRTCPFYKILPNFSICVDAFRYGAVEGCNAYFLSHYHSDHYMGLTSSWRHGP 459
Query: 169 IYCSPLTARLVRMCLLVNPSYIH--PLELNTE-HVIDGVKVTLLEANHCPGAALIHFRLQ 225
IYCS TA LVR L V+P ++ P E TE +GV VT++EANHCPG+A+ F Q
Sbjct: 460 IYCSRATANLVRQQLKVDPKWVVDLPFEKKTEVPGTNGVHVTMIEANHCPGSAIFLFEKQ 519
Query: 226 DG-------QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPK 266
G Q LH GDFRAS + LL +++V YLDTTY +PK
Sbjct: 520 MGSGPSARVQRILHCGDFRASPTHVQHVLLRPEVDDPTTGQRRQQKIDVCYLDTTYLSPK 579
Query: 267 YKFPSKEDVL----NYVVRLTKN------------------------------------- 285
Y FPS+EDV+ N V L +N
Sbjct: 580 YAFPSQEDVIEACANLCVSLDQNPEQGVGQSLLQKESSGAGKVMSRFFSAMSGSRGNSDK 639
Query: 286 -CLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQ 344
+ Q + LVV+G YSIGKE + L I++AL KIYA +++RV + + PELS L
Sbjct: 640 QAAQAQGRLLVVIGTYSIGKERICLGIARALKSKIYATPAKKRVCECLEDPELSSLLTDN 699
Query: 345 GNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD-------- 396
+ +H+ + ++ ETL DYL ++ V+ FRPTGWTY G LD
Sbjct: 700 PAEAQVHMQTLFEIRAETLADYLDSMKPHFSRVVGFRPTGWTYRPPTGRTLDNPPVSTVL 759
Query: 397 ----LIRPLSRGNIT----------IYGVPYSEHSSFTELREF 425
P S ++T YGVPYSEHSSF EL F
Sbjct: 760 HSPQWKTPFSARDLTPQRGSTRESACYGVPYSEHSSFRELTMF 802
>gi|148669814|gb|EDL01761.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Mus musculus]
Length = 557
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 122/246 (49%), Positives = 167/246 (67%), Gaps = 2/246 (0%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
V R+CPFYK+IPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 288 VRRTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEIT 346
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
L++ L V YI L ++TE V+D VKV LL+ANHCPGA +I F+L +G LHTGD
Sbjct: 347 GNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILHTGD 406
Query: 236 FRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
FRA M+ L +V+ L+LDTTYC+P+Y FPS+++V+ + + + P+ LV
Sbjct: 407 FRADPSMERS-RLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALV 465
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V G Y IGKE VFLAI+ LG K+ + + + LQ + PE+S + T D+L+H+LPM
Sbjct: 466 VCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPM 525
Query: 356 SSLKFE 361
+ F+
Sbjct: 526 MQINFK 531
>gi|119481915|ref|XP_001260986.1| DNA repair protein Pso2/Snm1, putative [Neosartorya fischeri NRRL
181]
gi|119409140|gb|EAW19089.1| DNA repair protein Pso2/Snm1, putative [Neosartorya fischeri NRRL
181]
Length = 848
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 163/440 (37%), Positives = 214/440 (48%), Gaps = 86/440 (19%)
Query: 72 QANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPF 131
Q + F + G KSNS + + A+ K+ R+CPFYK +PG
Sbjct: 361 QHDPFSLGGTKSNSAFSKIMTGNAEDTAWATAAAGEIASRGKQAYQRTCPFYKILPGFSI 420
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIH 191
VDAFRYG+++GC+AYFL+H+H DHY GL W HGPIYCS TA LVR L V+ ++
Sbjct: 421 CVDAFRYGAVEGCNAYFLSHYHSDHYMGLTSSWRHGPIYCSRATANLVRQQLKVDSKWVV 480
Query: 192 --PLELNTE-HVIDGVKVTLLEANHCPGAALIHFRLQDG-------QCYLHTGDFRASRL 241
P E TE +GV VT++EANHCPG+A+ F Q G Q LH GDFRAS
Sbjct: 481 DLPFEKKTEVPETNGVHVTMIEANHCPGSAIFLFEKQMGSGPSARVQRILHCGDFRASPT 540
Query: 242 MQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVL----NYVVRLTKN 285
+ LL +++V YLDTTY +PKY FPS+EDV+ N V L +N
Sbjct: 541 HVQHALLRPEIDDPTTGQRRQQKIDVCYLDTTYLSPKYAFPSQEDVIEACANLCVSLDQN 600
Query: 286 --------------------------------------CLKKQPKTLVVVGAYSIGKESV 307
+ Q + LVV+G YSIGKE +
Sbjct: 601 PEGGVGQSLLQKESSGAGKVMSRFFAAMGGSRGNSEKQAAQAQGRLLVVIGTYSIGKERI 660
Query: 308 FLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYL 367
L I++AL KIYA +++RV + PELS L + +H+ + ++ ETL DYL
Sbjct: 661 CLGIARALKSKIYATPAKKRVCTCLEDPELSSLLTDDPTEAQVHMQTLFEIRAETLADYL 720
Query: 368 KPYGNQYAAVLAFRPTGWTYSETVGNQLD------------LIRPLSRGNIT-------- 407
++ V+ FRPTGW Y G LD P S ++T
Sbjct: 721 DSMKPHFSRVVGFRPTGWNYRPPAGRMLDNPPVSTVLHSPQWKTPFSARDLTPQRGSTRE 780
Query: 408 --IYGVPYSEHSSFTELREF 425
YGVPYSEHSSF EL F
Sbjct: 781 SACYGVPYSEHSSFRELTMF 800
>gi|195501976|ref|XP_002098027.1| GE10135 [Drosophila yakuba]
gi|194184128|gb|EDW97739.1| GE10135 [Drosophila yakuba]
Length = 740
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 198/329 (60%), Gaps = 14/329 (4%)
Query: 102 ASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG 161
A N K T K+ + CP YK + GT F VD F++G I + YFLTHFH DHY GL
Sbjct: 250 AKNSKK-GTGRKEKRPKPCPPYKVVEGTTFCVDGFQFGDIDRVTHYFLTHFHADHYIGLT 308
Query: 162 KRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIH 221
K++ + P+Y SP TARLVR + ++ +YI+ ++++ +DGV+VT LEANHCPGA +
Sbjct: 309 KKFCY-PLYVSPTTARLVRTFIKIDETYIYEIDVDQTLTVDGVEVTALEANHCPGALMFF 367
Query: 222 FRLQDGQCYLHTGDFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVV 280
F+L+ G+C LHTGDFRAS M+S P+ NH +++LYLDTTY N Y F + + ++ V
Sbjct: 368 FKLRSGECILHTGDFRASADMESLPIFWNHANIDLLYLDTTYLNKNYDFCHQSESVDRAV 427
Query: 281 RLTKNCLKKQP--KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELS 338
L + L+K + L+V G+Y IGKE ++LA++K ++++ ++R ++ WPEL
Sbjct: 428 DLVRVFLEKNASKRILIVCGSYVIGKEKIWLALAKEFNLRVWTESNRSTAVRCLKWPELD 487
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI 398
L + LHV+ M + + +L DY + +QY +L RP+GW +
Sbjct: 488 SVLTEDPREANLHVVAMGKISYPSLVDYFSLFEDQYDMLLGIRPSGWEKN---------T 538
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+P I+ G+ YSEHSS+ EL FV+
Sbjct: 539 KPSYGKRISTIGIEYSEHSSYKELERFVR 567
>gi|134078210|emb|CAK40289.1| unnamed protein product [Aspergillus niger]
Length = 809
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 153/378 (40%), Positives = 196/378 (51%), Gaps = 54/378 (14%)
Query: 102 ASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG 161
A+ A+ K+ R+CPFYK IPG VDAFRYG+++GC+AYFL+HFH DHY GL
Sbjct: 384 AAAANEVASRGKQAYQRTCPFYKIIPGFSLCVDAFRYGAVEGCNAYFLSHFHSDHYIGLT 443
Query: 162 KRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAA 218
W HGPIYCS TA LV L V+ ++ PLE + I G +VTL+EANHCPG+A
Sbjct: 444 GSWRHGPIYCSRPTANLVCQQLKVDRKWLVPLEFERKTEIPDTGGAQVTLIEANHCPGSA 503
Query: 219 LIHFRLQDGQC-------YLHTGDFRASRLMQSYPLLV------------NHRVNVLYLD 259
+ F G LH GDFRAS L + LL R++ YLD
Sbjct: 504 IFLFEKSMGSGPSQRTHRVLHCGDFRASPLHVQHALLRPEIADPATGKARQQRIDACYLD 563
Query: 260 TTYCNPKYKFPSKEDVLNYVVRL----------TKNCLKKQPKTLVVVGAYSIGKESVFL 309
TTY +PKY FP +EDV+ L T + + LVV+G YSIGKE + L
Sbjct: 564 TTYLSPKYAFPGQEDVIQACAELCVELDGDANDTNGRARPPGRLLVVIGTYSIGKERICL 623
Query: 310 AISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKP 369
I++AL KIYA +++RV + ELS L + +H+ + ++ ETL DYL
Sbjct: 624 GIARALKSKIYATPAKQRVCACLEDAELSSLLTDDPTEAQVHMQTLFEIRAETLADYLDS 683
Query: 370 YGNQYAAVLAFRPTGWTYSETVGNQLD------------LIRPLS-------RGNI---T 407
+ V+ FRPTGWTY G LD P S RG+
Sbjct: 684 MKPHFTRVVGFRPTGWTYRPPAGRMLDNPPVSVVLNSAHWKTPFSAKDLVPQRGSTRESA 743
Query: 408 IYGVPYSEHSSFTELREF 425
+GVPYSEHSSF EL F
Sbjct: 744 CFGVPYSEHSSFRELSMF 761
>gi|242812130|ref|XP_002485895.1| DNA repair protein Pso2/Snm1, putative [Talaromyces stipitatus ATCC
10500]
gi|218714234|gb|EED13657.1| DNA repair protein Pso2/Snm1, putative [Talaromyces stipitatus ATCC
10500]
Length = 792
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 159/399 (39%), Positives = 209/399 (52%), Gaps = 82/399 (20%)
Query: 109 ATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP 168
A+ K+ +R+CPFYK +PG TVDAFRYGS++GC AYFL+HFH DHYGGL WSHG
Sbjct: 346 ASRGKQAYERTCPFYKILPGFSITVDAFRYGSVEGCQAYFLSHFHSDHYGGLTASWSHGL 405
Query: 169 IYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR-- 223
IYCS +T LVR L V+P Y+ LE + + GV VT+L ANHCPG++L F
Sbjct: 406 IYCSKVTGNLVRQQLKVDPKYVVDLEFEKKTEVPNTKGVYVTMLYANHCPGSSLFLFEKV 465
Query: 224 LQDGQCY--LHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKF 269
+ G+ + LH GDFRA +PLL R++V YLDTTY NPKY F
Sbjct: 466 MDTGRIHRVLHCGDFRACPAHVQHPLLKPDVVDVASGQSHQQRIDVCYLDTTYLNPKYAF 525
Query: 270 PSKEDVL----NYVVRLT---------------------KNCL----------------K 288
P++EDV+ + VRL+ N L
Sbjct: 526 PNQEDVITACADMCVRLSDEQGDRNEALEFHKRGKMDAMANFLSTTKGKDFTPSSFTSDS 585
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
+ + LVV+G YSIGKE + L I++AL KIYA ++RV + PELS L +
Sbjct: 586 SRGRLLVVIGTYSIGKERICLGIARALKCKIYAPPQKQRVCACLEDPELSSLLTDNPLEA 645
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD------------ 396
+H+ + ++ ETL DYL+ + ++ V+ FRPTGWTY G LD
Sbjct: 646 QIHMQILFEIRAETLSDYLQSFKGHFSRVVGFRPTGWTYRPPGGRLLDNPPVANVLYSSN 705
Query: 397 LIRPLS-------RGNI---TIYGVPYSEHSSFTELREF 425
P S RG+ + +GVPYSEHSSF EL F
Sbjct: 706 WKTPFSVSDLVPQRGSTKESSCFGVPYSEHSSFRELTMF 744
>gi|242049406|ref|XP_002462447.1| hypothetical protein SORBIDRAFT_02g025710 [Sorghum bicolor]
gi|241925824|gb|EER98968.1| hypothetical protein SORBIDRAFT_02g025710 [Sorghum bicolor]
Length = 963
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 197/313 (62%), Gaps = 8/313 (2%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKG-CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
+ P + IPGTPF VDAFRY ++G CS +FLTHFH DHY GL + + HG IYCS +TA
Sbjct: 627 KDTPLWCCIPGTPFRVDAFRY--LRGDCSHWFLTHFHVDHYQGLTRSFCHGKIYCSSITA 684
Query: 177 RLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
LV + + +H L LN + I GV +T +ANHCPG+ +I F +G+ LHTGDF
Sbjct: 685 SLVHHKIGIPWDRLHVLTLNEKLTIGGVSLTCFDANHCPGSIIILFEPPNGKAVLHTGDF 744
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
R S M + P+L + ++ L LDTTYCNP+Y FPS+E V+ +V+ + PKTL +
Sbjct: 745 RFSSEMANNPVLQSSHIHTLILDTTYCNPRYDFPSQEIVIQFVIEAIQ-AEAFNPKTLFL 803
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWP-ELSGNLCTQGNDTLLHVLPM 355
+G+Y+IGKE +F+ +++ L KIY A++ ++L+ + P E+ ++ +HV+PM
Sbjct: 804 IGSYTIGKERLFMEVARLLQKKIYVGAAKLQILKHLELPQEIMHWFTANEAESHIHVVPM 863
Query: 356 SSL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYS 414
+L F+ +K Y Q+ ++AF PTGW + + G + + +G+I Y VPYS
Sbjct: 864 WTLASFKRMKYLSNQYAGQFDLIVAFCPTGWAFGK--GRKKTPGKRWQQGSIIRYEVPYS 921
Query: 415 EHSSFTELREFVQ 427
EHSSFTEL+EFV+
Sbjct: 922 EHSSFTELQEFVK 934
>gi|326484025|gb|EGE08035.1| DNA repair protein Pso2/Snm1 [Trichophyton equinum CBS 127.97]
Length = 848
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 211/403 (52%), Gaps = 84/403 (20%)
Query: 106 KSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS 165
+ A+ K+ +R+CPFYK +PG TVDAFRYG+I+GC+AYFL+H+H DHYGGL WS
Sbjct: 396 REEASRGKQAYERTCPFYKILPGFSITVDAFRYGAIEGCNAYFLSHYHSDHYGGLTSSWS 455
Query: 166 HGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHF 222
HGPIYCS +TA LV+ + V P + LE + I DGV VT++ ANHCPG++L F
Sbjct: 456 HGPIYCSTVTANLVKQQIKVKPDMVVELEFERKTEIPGTDGVSVTMITANHCPGSSLFLF 515
Query: 223 RLQDGQC-------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYC 263
G+ LH GDFRAS ++PLL +++V YLDTTY
Sbjct: 516 EKPIGKGKNARIHRILHCGDFRASSAHINHPLLRPNIQDRHTGKITEQKIDVCYLDTTYL 575
Query: 264 NPKYKFPSKEDVLNYVVRLT--------------KNCLKK-------------------- 289
NPKY FP ++DV+N +L K KK
Sbjct: 576 NPKYAFPFQQDVINACAQLCVGVNEGYFDTLGAGKGQAKKSGSMTPFLQSNQGSDRNSAV 635
Query: 290 ----QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG 345
+ K LVV+G YSIGKE + L +++AL KIY + +++R+ + + ELS + +
Sbjct: 636 DQYTRGKLLVVIGTYSIGKERICLGVARALNSKIYVSPNKKRICECLEDAELSSIVTSDP 695
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS--- 402
D +H+ + ++ ETL +YLK G+++ ++ RPTGW+Y G + D P+S
Sbjct: 696 LDAQVHMHSLMDMRSETLSEYLKSLGSRFTRIIGIRPTGWSYRPRGGTRTDSP-PVSAVL 754
Query: 403 -----------------RGNI---TIYGVPYSEHSSFTELREF 425
RG+ + VPYSEHSSF EL F
Sbjct: 755 YSEAWKPRFSVNDLVPQRGSTNEAACFSVPYSEHSSFRELTMF 797
>gi|326476055|gb|EGE00065.1| DNA repair protein Pso2/Snm1 [Trichophyton tonsurans CBS 112818]
Length = 848
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 211/403 (52%), Gaps = 84/403 (20%)
Query: 106 KSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS 165
+ A+ K+ +R+CPFYK +PG TVDAFRYG+I+GC+AYFL+H+H DHYGGL WS
Sbjct: 396 REEASRGKQAYERTCPFYKILPGFSITVDAFRYGAIEGCNAYFLSHYHSDHYGGLTSSWS 455
Query: 166 HGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHF 222
HGPIYCS +TA LV+ + V P + LE + I DGV VT++ ANHCPG++L F
Sbjct: 456 HGPIYCSTVTANLVKQQIKVKPDMVVELEFERKTEIPGTDGVSVTMITANHCPGSSLFLF 515
Query: 223 RLQDGQC-------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYC 263
G+ LH GDFRAS ++PLL +++V YLDTTY
Sbjct: 516 EKPIGKGKNARIHRILHCGDFRASSAHINHPLLRPNIQDRHTGKITEQKIDVCYLDTTYL 575
Query: 264 NPKYKFPSKEDVLNYVVRLT--------------KNCLKK-------------------- 289
NPKY FP ++DV+N +L K KK
Sbjct: 576 NPKYAFPFQQDVINACAQLCVGVNEGYFDTLGAGKGQAKKSGSMTPFLQSNQGSDRNSAV 635
Query: 290 ----QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG 345
+ K LVV+G YSIGKE + L +++AL KIY + +++R+ + + ELS + +
Sbjct: 636 DQYTRGKLLVVIGTYSIGKERICLGVARALNSKIYVSPNKKRICECLEDAELSSIVTSDP 695
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS--- 402
D +H+ + ++ ETL +YLK G+++ ++ RPTGW+Y G + D P+S
Sbjct: 696 LDAQVHMHSLMDMRSETLSEYLKSLGSRFTRIIGIRPTGWSYRPRGGTRTDSP-PVSAVL 754
Query: 403 -----------------RGNI---TIYGVPYSEHSSFTELREF 425
RG+ + VPYSEHSSF EL F
Sbjct: 755 YSEAWKPRFSVNDLVPQRGSTNEAACFSVPYSEHSSFRELTMF 797
>gi|15225548|ref|NP_182094.1| sterile alpha motif (SAM) domain-containing protein [Arabidopsis
thaliana]
gi|3386625|gb|AAC28555.1| hypothetical protein [Arabidopsis thaliana]
gi|20197051|gb|AAM14896.1| hypothetical protein [Arabidopsis thaliana]
gi|28973723|gb|AAO64178.1| unknown protein [Arabidopsis thaliana]
gi|29824257|gb|AAP04089.1| unknown protein [Arabidopsis thaliana]
gi|110736829|dbj|BAF00373.1| hypothetical protein [Arabidopsis thaliana]
gi|330255495|gb|AEC10589.1| sterile alpha motif (SAM) domain-containing protein [Arabidopsis
thaliana]
Length = 723
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 195/309 (63%), Gaps = 8/309 (2%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
P + IPGTPF VDAF+Y + + C +FLTHFH DHY GL K +SHG IYCS +TA+LV
Sbjct: 393 PHWNCIPGTPFRVDAFKYLT-RDCCHWFLTHFHLDHYQGLTKSFSHGKIYCSLVTAKLVN 451
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
M + + + L+L + I G+ VT +ANHCPG+ +I F +G+ LHTGDFR S
Sbjct: 452 MKIGIPWERLQVLDLGQKVNISGIDVTCFDANHCPGSIMILFEPANGKAVLHTGDFRYSE 511
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
M ++ L+ ++ L LDTTYCNP+Y FP +E V+ +VV + PKTL ++G+Y
Sbjct: 512 EMSNW--LIGSHISSLILDTTYCNPQYDFPKQEAVIQFVVEAIQ-AEAFNPKTLFLIGSY 568
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCT-QGNDTLLHVLPMSSL- 358
+IGKE +FL +++ L KIY N ++ ++L+ + + T + ++ +HV+P+ +L
Sbjct: 569 TIGKERLFLEVARVLREKIYINPAKLKLLECLGFSKDDIQWFTVKEEESHIHVVPLWTLA 628
Query: 359 KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSS 418
F+ LK Y N+Y+ ++AF PTGWT +T R L +G I Y VPYSEHSS
Sbjct: 629 SFKRLKHVANRYTNRYSLIVAFSPTGWTSGKTKKKSPG--RRLQQGTIIRYEVPYSEHSS 686
Query: 419 FTELREFVQ 427
FTEL+EFVQ
Sbjct: 687 FTELKEFVQ 695
>gi|357465917|ref|XP_003603243.1| DNA cross-link repair 1A protein [Medicago truncatula]
gi|355492291|gb|AES73494.1| DNA cross-link repair 1A protein [Medicago truncatula]
Length = 671
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 144/332 (43%), Positives = 208/332 (62%), Gaps = 17/332 (5%)
Query: 98 KKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKG-CSAYFLTHFHYDH 156
+K KA N ST+T ++ I P + I GTPF VDAF+Y ++G CS +FLTHFH DH
Sbjct: 325 RKRKAKN-ISTSTKIRDI-----PKWCAIQGTPFRVDAFKY--LRGDCSHWFLTHFHMDH 376
Query: 157 YGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPG 216
Y GL K ++HG IYCS +TARLV M + + +H L LN + I G+ VT L+ANHCPG
Sbjct: 377 YQGLTKSFNHGKIYCSSVTARLVNMNIGIPYDKLHILPLNQKVEIAGIGVTCLDANHCPG 436
Query: 217 AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
+ +I F + LHTGDFR S M + PLL ++ L LDTTYCNP+Y FP +E V+
Sbjct: 437 SIIILFEPPN---VLHTGDFRYSEEMANNPLLQTCPIHTLILDTTYCNPQYDFPKQEAVI 493
Query: 277 NYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
+V+ + P+TL ++G+Y+IGKE +FL ++++L K+Y A++ R+L+ ++ E
Sbjct: 494 QFVIDAIQ-AEAFNPRTLFLIGSYTIGKERLFLEVARSLHQKVYVTAAKLRLLKCLEFTE 552
Query: 337 LSGNLCTQG-NDTLLHVLPMSSL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQ 394
T +++ +HV PM +L F+ LK Y ++++ ++AF PTGWT+ + G +
Sbjct: 553 EDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGK--GKK 610
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
R +G I Y VPYSEH SFTEL+EFV
Sbjct: 611 KSPGRRWQQGTIIRYEVPYSEHCSFTELKEFV 642
>gi|302498636|ref|XP_003011315.1| DNA repair protein Pso2/Snm1, putative [Arthroderma benhamiae CBS
112371]
gi|291174865|gb|EFE30675.1| DNA repair protein Pso2/Snm1, putative [Arthroderma benhamiae CBS
112371]
Length = 848
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 149/403 (36%), Positives = 211/403 (52%), Gaps = 84/403 (20%)
Query: 106 KSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS 165
+ A+ K+ +R+CPFYK +PG T+DAFRYG+I+GC+AYFL+H+H DHYGGL WS
Sbjct: 396 REEASRGKQAYERTCPFYKILPGFSITIDAFRYGAIEGCNAYFLSHYHSDHYGGLTSSWS 455
Query: 166 HGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHF 222
HGPIYCS +TA LV+ + V P + LE + I DGV VT++ ANHCPG++L F
Sbjct: 456 HGPIYCSTVTANLVKQQIKVKPDLVVELEFERKTEIPGTDGVSVTMITANHCPGSSLFLF 515
Query: 223 RLQDGQC-------YLHTGDFRASRLMQSYPL------------LVNHRVNVLYLDTTYC 263
G+ LH GDFRAS ++PL L +++V YLDTTY
Sbjct: 516 EKAIGKGKNARIHRILHCGDFRASSAHINHPLLRPNIQDRHTGKLTEQKIDVCYLDTTYL 575
Query: 264 NPKYKFPSKEDVLNYVVRL----------TKNCLKKQPKT-------------------- 293
NPKY FP ++DV++ +L T K+Q K
Sbjct: 576 NPKYAFPFQQDVISACAQLCAGVNEGYLDTLGAGKEQAKKSGSMAPFLQSNHGSDRNSAV 635
Query: 294 --------LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG 345
LVV+G YSIGKE + L +++AL KIY + +++R+ + + ELS L +
Sbjct: 636 DQHNRGKLLVVIGTYSIGKERMCLGVARALNSKIYVSPNKKRICECLEDAELSSILTSDP 695
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS--- 402
D +H+ + ++ ETL +YLK G+++ ++ RPTGW+Y G + D P+S
Sbjct: 696 LDAQVHMHSLMDMRSETLSEYLKSLGSRFTRIIGIRPTGWSYRPRGGTRTDCP-PVSAVL 754
Query: 403 -----------------RGNI---TIYGVPYSEHSSFTELREF 425
RG+ + VPYSEHSSF EL F
Sbjct: 755 YSEAWKPRFSVNDLVPQRGSTNEAACFSVPYSEHSSFRELTMF 797
>gi|357153799|ref|XP_003576570.1| PREDICTED: uncharacterized protein LOC100843196 [Brachypodium
distachyon]
Length = 910
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 205/334 (61%), Gaps = 10/334 (2%)
Query: 98 KKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKG-CSAYFLTHFHYDH 156
+K ++ ++ + ++K + P + IPGTPF VD+FRY ++G CS +FLTHFH DH
Sbjct: 554 QKKSSAKVATSRSLIRKGKVKDTPIWCCIPGTPFRVDSFRY--LRGDCSHWFLTHFHLDH 611
Query: 157 YGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPG 216
Y GL + + HG I+CS +TA+LV + V H L LN + GV +T +ANHCPG
Sbjct: 612 YQGLTRSFCHGKIFCSSITAKLVHHKIGVPWDRFHVLPLNKRITVSGVNLTCFDANHCPG 671
Query: 217 AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
A +I F G+ LHTGDFR S M + P+L + ++ L LDTTYC+P+Y FPS+E V+
Sbjct: 672 AIIILFEPPSGRAILHTGDFRFSSEMANNPVLQSSHIHTLILDTTYCSPRYDFPSQETVI 731
Query: 277 NYVVR-LTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWP 335
+V+ + K KTL ++G+Y+IGKE +F + + L KIY A++ ++L+ + P
Sbjct: 732 QFVIEAIQAEAFNK--KTLFLIGSYTIGKERLFTEVGRLLQKKIYVGAAKLQILKHLELP 789
Query: 336 -ELSGNLCTQGNDTLLHVLPMSSL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGN 393
E+ L ++ +HV+PM +L F+ LK Y +++ ++AF PTGW++ + G
Sbjct: 790 QEIMPWLTANEAESQIHVVPMWTLASFKRLKHLSSQYADRFDLIVAFCPTGWSFGK--GK 847
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ R +G I Y VPYSEHSSFTELREFV+
Sbjct: 848 KKTPGRRWQQGTIIRYEVPYSEHSSFTELREFVR 881
>gi|327305525|ref|XP_003237454.1| DNA repair protein Pso2/Snm1 [Trichophyton rubrum CBS 118892]
gi|326460452|gb|EGD85905.1| DNA repair protein Pso2/Snm1 [Trichophyton rubrum CBS 118892]
Length = 849
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 210/403 (52%), Gaps = 84/403 (20%)
Query: 106 KSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS 165
+ A+ K+ +R+CPFYK +PG TVDAFRYG+I+GC+AYFL+H+H DHYGGL WS
Sbjct: 397 REEASRGKQAYERTCPFYKILPGFSITVDAFRYGAIEGCNAYFLSHYHSDHYGGLTSSWS 456
Query: 166 HGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHF 222
HGPIYCS +TA LV+ + V P + LE + I DGV VT++ ANHCPG++L F
Sbjct: 457 HGPIYCSTVTANLVKQQIKVKPDMVVELEFERKTEIPGTDGVSVTMITANHCPGSSLFLF 516
Query: 223 RLQDGQC-------YLHTGDFRASRLMQSYPL------------LVNHRVNVLYLDTTYC 263
G+ LH GDFRAS ++PL L +++V YLDTTY
Sbjct: 517 EKPIGKGKNARIHRILHCGDFRASSAHINHPLLRPNIQDRHTGKLTEQKIDVCYLDTTYL 576
Query: 264 NPKYKFPSKEDVLNYVVRLT--------------KNCLKK-------------------- 289
NPKY FP ++DV+N +L K KK
Sbjct: 577 NPKYAFPFQQDVINACAQLCAGVNEGYFDTLGAGKGQAKKSGSMAPFLQSNQGSDRNSAV 636
Query: 290 ----QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG 345
+ K LVV+G YSIGKE + L +++AL KIY + +++R+ + + ELS L +
Sbjct: 637 DQHNRGKLLVVIGTYSIGKERMCLGVARALNSKIYVSPNKKRICECLEDAELSSILTSDP 696
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS--- 402
D +H+ + ++ E L +YLK G+++ ++ RPTGW+Y G + D P+S
Sbjct: 697 LDAQVHMHSLMDMRSEILSEYLKSLGSRFTRIIGIRPTGWSYRPRGGTRTDSP-PVSAVL 755
Query: 403 -----------------RGNI---TIYGVPYSEHSSFTELREF 425
RG+ + VPYSEHSSF EL F
Sbjct: 756 YSEAWKPRFSVNDLVPQRGSTNEAACFSVPYSEHSSFRELTMF 798
>gi|302822859|ref|XP_002993085.1| hypothetical protein SELMODRAFT_449005 [Selaginella moellendorffii]
gi|300139085|gb|EFJ05833.1| hypothetical protein SELMODRAFT_449005 [Selaginella moellendorffii]
Length = 795
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 195/315 (61%), Gaps = 19/315 (6%)
Query: 123 YKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMC 182
+ KIPGT F VDAF++ + + CS +FLTHFH DHY GL K + G IYCS +TARLV +
Sbjct: 354 WMKIPGTTFRVDAFKHTTTE-CSHWFLTHFHSDHYQGLTKSFRFGKIYCSMITARLVNLR 412
Query: 183 LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR----A 238
+ + +HPL LN IDGV VTLL+ANHCPGAA+I F DG+ LHTGDFR
Sbjct: 413 IGITWDRLHPLNLNERTKIDGVWVTLLDANHCPGAAMILFETHDGKFVLHTGDFRFCDDM 472
Query: 239 SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
+R+M P R++ L LDTTYC+P+Y FP +E V+ +V+ + P TL ++G
Sbjct: 473 ARIMDILPC----RLSALVLDTTYCDPQYDFPKQETVIQFVIDAIQ-AESFNPSTLFLIG 527
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN-DTLLHVLPMSS 357
YS+GKE +FL +++ L KIY A +RR+L D + + T ++ +HV+P+ S
Sbjct: 528 TYSLGKERLFLEVARVLRKKIYVGAVKRRMLGCLDLSDEDMDWITTSECESSIHVVPLWS 587
Query: 358 L-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSE---TVGNQLDLIRPLSRGNITIYGVPY 413
+ F+ + + Y +Y +++F PTGW++S+ GN + +G I Y VPY
Sbjct: 588 IASFKRMASISRHYHGKYTTIVSFSPTGWSFSKGKRGTGNG----KRWQQGTIIRYEVPY 643
Query: 414 SEHSSFTELREFVQV 428
SEHSSFTEL+ FV++
Sbjct: 644 SEHSSFTELKTFVKL 658
>gi|315046636|ref|XP_003172693.1| hypothetical protein MGYG_09076 [Arthroderma gypseum CBS 118893]
gi|311343079|gb|EFR02282.1| hypothetical protein MGYG_09076 [Arthroderma gypseum CBS 118893]
Length = 848
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 212/403 (52%), Gaps = 84/403 (20%)
Query: 106 KSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS 165
+ A+ K+ +R+CPFYK +PG TVDAFRYG+I+GCSAYFL+H+H DHYGGL WS
Sbjct: 396 REEASRGKQAYERTCPFYKILPGFSVTVDAFRYGAIEGCSAYFLSHYHSDHYGGLTSSWS 455
Query: 166 HGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHF 222
HGPIYCS +TA LV+ + V + LE + I DG VT++ ANHCPG++L F
Sbjct: 456 HGPIYCSSVTANLVKQQINVKADMVVELEFEQKTEIPGTDGASVTMITANHCPGSSLFLF 515
Query: 223 RLQDGQC-------YLHTGDFRASRLMQSYPL------------LVNHRVNVLYLDTTYC 263
+G+ LH GDFRAS ++PL L +++V YLDTTY
Sbjct: 516 EKPNGKGNNARVHRILHCGDFRASSSHINHPLLRPNIMDPLTGQLTQQKIDVCYLDTTYL 575
Query: 264 NPKYKFPSKEDVLNYVVRL----------TKNCLKKQPKT-------------------- 293
NPKY FP ++DV+N ++ T + K Q K
Sbjct: 576 NPKYAFPFQQDVINACAQMCAGVNEGYFTTLDAGKGQTKKSGFMTPFLPNSQSSDRTSAS 635
Query: 294 --------LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG 345
LVV+G YSIGKE + L +++AL KIY + ++RR+ + + +LS L +
Sbjct: 636 DQHNRGKLLVVIGTYSIGKERMCLGVARALNSKIYVSPNKRRICECLEDDKLSSILTSDP 695
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS--- 402
D +H+ + ++ ETL +YLK + ++++ ++ RPTGW+Y G + D P+S
Sbjct: 696 LDAQVHMHSLMDMRSETLSEYLKSFSSRFSRIIGIRPTGWSYRPRGGTRTDSP-PVSAVL 754
Query: 403 -----------------RGN---ITIYGVPYSEHSSFTELREF 425
RG+ + + VPYSEHSSF EL F
Sbjct: 755 YSEAWKPRFSVNDLVPQRGSTNEVACFSVPYSEHSSFRELTMF 797
>gi|158290010|ref|XP_311587.4| AGAP010353-PA [Anopheles gambiae str. PEST]
gi|157018434|gb|EAA07248.4| AGAP010353-PA [Anopheles gambiae str. PEST]
Length = 689
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/336 (41%), Positives = 199/336 (59%), Gaps = 19/336 (5%)
Query: 94 SPPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFH 153
+P +K +++ KS KKI+ CP YK I GT F VDAFRYG I+G + YFLTHFH
Sbjct: 251 TPGLKAPRSARSKSG----KKIM---CPSYKIIAGTNFAVDAFRYGDIEGVTHYFLTHFH 303
Query: 154 YDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANH 213
DHY GL K +S P+ S +TARLV+ + V + +EL+ VID V++ L+ANH
Sbjct: 304 ADHYIGLKKTFSK-PLIMSSITARLVKAFINVAEEFYQIVELHQSIVIDDVEIIALDANH 362
Query: 214 CPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKE 273
CPG + FRL +G LHTGDFRAS M+ YP N +++++YLDTTY + KY F S+
Sbjct: 363 CPGGIMFLFRLPNGSNVLHTGDFRASPEMEEYPEFWNFQIDIIYLDTTYLSSKYAFKSQW 422
Query: 274 DVLNYVVRLTKNCLKKQ--PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQS 331
+ + LKK K L+V G+Y IGKE V+L ++ + G+K++ +R + L++
Sbjct: 423 ESVADARETVSAYLKKHIGVKVLIVCGSYLIGKEKVWLELAISTGMKVWTEPNRWKALKA 482
Query: 332 FDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETV 391
+ L N +HVL M+ L ++ L +Y+ + ++Y +V+A RP+GW +
Sbjct: 483 IADSQQLSVLVADPNKANIHVLAMNKLSYDELNEYMNQFPDRYESVIAIRPSGWEKNS-- 540
Query: 392 GNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+P RG I I G+ YSEHSSF EL+ FVQ
Sbjct: 541 -------KPQYRGRINIVGIEYSEHSSFDELKRFVQ 569
>gi|302664058|ref|XP_003023665.1| DNA repair protein Pso2/Snm1, putative [Trichophyton verrucosum HKI
0517]
gi|291187671|gb|EFE43047.1| DNA repair protein Pso2/Snm1, putative [Trichophyton verrucosum HKI
0517]
Length = 845
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/403 (36%), Positives = 210/403 (52%), Gaps = 84/403 (20%)
Query: 106 KSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS 165
+ A+ K+ +R+CPFYK +PG TVDAFRYG+I+GC+AYFL+H+H DHYGGL WS
Sbjct: 393 REEASRGKQAYERTCPFYKILPGFSITVDAFRYGAIEGCNAYFLSHYHSDHYGGLTSSWS 452
Query: 166 HGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHF 222
HGPIYCS +TA LV+ + V P + LE + I DGV VT++ ANHCPG++L F
Sbjct: 453 HGPIYCSTVTANLVKQQIKVKPDMVVELEFEQKTEIPDTDGVSVTMIAANHCPGSSLFLF 512
Query: 223 RLQDGQC-------YLHTGDFRASRLMQSYPL------------LVNHRVNVLYLDTTYC 263
G+ LH GDFRAS ++PL L +++V YLDTTY
Sbjct: 513 EKAIGKGKNARIHRILHCGDFRASSAHINHPLLRPNIQDRHTGKLSEQKIDVCYLDTTYL 572
Query: 264 NPKYKFPSKEDVLNYVVRL----------TKNCLKKQPKT-------------------- 293
NPKY FP ++DV++ +L T K Q K
Sbjct: 573 NPKYAFPFQQDVISACAQLCAGVNEGYFDTLGARKGQAKKSGSMTPLLQSNQGSDRNSVV 632
Query: 294 --------LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG 345
LVV+G YSIGKE + L +++AL KIY + +++R+ + + EL+ L +
Sbjct: 633 DQHNRGKLLVVIGTYSIGKERMCLGVARALNSKIYVSPNKKRICECLEDAELASILTSDP 692
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS--- 402
D +H+ + ++ ETL +YLK G+++ ++ RPTGW+Y G + D P+S
Sbjct: 693 LDAQVHMHSLMDMRSETLSEYLKSLGSRFTRIIGIRPTGWSYRPRGGTRTDCP-PVSAVL 751
Query: 403 -----------------RGNI---TIYGVPYSEHSSFTELREF 425
RG+ + VPYSEHSSF EL F
Sbjct: 752 YSDAWKPRFSINDLVPQRGSTNEAACFSVPYSEHSSFRELTMF 794
>gi|125563862|gb|EAZ09242.1| hypothetical protein OsI_31515 [Oryza sativa Indica Group]
Length = 966
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/351 (39%), Positives = 208/351 (59%), Gaps = 11/351 (3%)
Query: 83 SNSESEANCLFSPPMKKLKASNGKSTATHLKKIVD---RSCPFYKKIPGTPFTVDAFRYG 139
S+ + C + P N + AT ++ V + P + IPGTPF VDAFRY
Sbjct: 592 SDQRQKKACKVNTPSNLNSQKNSNAKATGGRRTVKGKVKDTPIWCCIPGTPFRVDAFRY- 650
Query: 140 SIKG-CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTE 198
++G C +FLTHFH DHY GL K + HG IYCS +TA LV + + +H L LN +
Sbjct: 651 -LRGDCCHWFLTHFHVDHYQGLTKSFCHGKIYCSSVTANLVHYKIGIPWDRLHVLPLNEK 709
Query: 199 HVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYL 258
I GV +T +ANHCPGA +I F +G+ LHTGDFR S M + +L + ++ L L
Sbjct: 710 ITIAGVNLTCFDANHCPGAVIILFEPSNGKAVLHTGDFRFSSEMANNRVLQSSPIHTLIL 769
Query: 259 DTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVK 318
DTTYCNP+Y FP++E V+ +V+ + PKTL ++G+Y+IGKE +++ +++ L K
Sbjct: 770 DTTYCNPRYDFPTQEIVIQFVIEAIQ-AEAFNPKTLFLIGSYTIGKERLYMEVARLLQKK 828
Query: 319 IYANASRRRVLQSFDWP-ELSGNLCTQGNDTLLHVLPMSSL-KFETLKDYLKPYGNQYAA 376
IY A++ ++L+ P E+ ++ +HV+PM +L F+ +K Y +++
Sbjct: 829 IYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTLASFKRMKYLSTQYADRFDL 888
Query: 377 VLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
++AF PTGW++ + G + R +G I Y VPYSEHSSFTELREFV+
Sbjct: 889 IVAFCPTGWSFGK--GKKRTPGRKWQQGAIIRYEVPYSEHSSFTELREFVR 937
>gi|302787062|ref|XP_002975301.1| hypothetical protein SELMODRAFT_415475 [Selaginella moellendorffii]
gi|300156875|gb|EFJ23502.1| hypothetical protein SELMODRAFT_415475 [Selaginella moellendorffii]
Length = 769
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 194/315 (61%), Gaps = 19/315 (6%)
Query: 123 YKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMC 182
+ KIPGT F VDAF++ + + CS +FLTHFH DHY GL K + G IYCS +TARLV +
Sbjct: 328 WMKIPGTTFRVDAFKHTTTE-CSHWFLTHFHSDHYQGLTKSFRFGKIYCSMITARLVNLR 386
Query: 183 LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR----A 238
+ + +HPL N IDGV VTLL+ANHCPGAA+I F DG+ LHTGDFR
Sbjct: 387 IGITWDRLHPLNFNERTKIDGVWVTLLDANHCPGAAMILFETHDGKFVLHTGDFRFCDDM 446
Query: 239 SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
+R+M P R++ L LDTTYC+P+Y FP +E V+ +V+ + P TL ++G
Sbjct: 447 ARIMDILPC----RLSTLVLDTTYCDPQYDFPKQETVIQFVIDAIQ-AESFNPSTLFLIG 501
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN-DTLLHVLPMSS 357
YS+GKE +FL +++ L KIY A +RR+L D + + T ++ +HV+P+ S
Sbjct: 502 TYSLGKERLFLEVARVLRKKIYVGAVKRRMLGCLDLSDEDMDWITTSECESSIHVVPLWS 561
Query: 358 L-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSE---TVGNQLDLIRPLSRGNITIYGVPY 413
+ F+ + + Y +Y +++F PTGW++S+ GN + +G I Y VPY
Sbjct: 562 IASFKRMASISRHYHGKYTTIVSFSPTGWSFSKGKRGTGNG----KRWQQGTIIRYEVPY 617
Query: 414 SEHSSFTELREFVQV 428
SEHSSFTEL+ FV++
Sbjct: 618 SEHSSFTELKTFVKL 632
>gi|115479355|ref|NP_001063271.1| Os09g0439000 [Oryza sativa Japonica Group]
gi|113631504|dbj|BAF25185.1| Os09g0439000 [Oryza sativa Japonica Group]
Length = 966
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/353 (40%), Positives = 211/353 (59%), Gaps = 15/353 (4%)
Query: 83 SNSESEANCLFSPP--MKKLKASNGKSTA---THLKKIVDRSCPFYKKIPGTPFTVDAFR 137
S+ + C + P + K SN K+T T K+ D P + IPGTPF VDAFR
Sbjct: 592 SDQRQKKACKVNTPSNLNSQKKSNAKATGGRRTVKGKVKDT--PIWCCIPGTPFRVDAFR 649
Query: 138 YGSIKG-CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELN 196
Y ++G C +FLTHFH DHY GL K + HG IYCS +TA LV + + +H L LN
Sbjct: 650 Y--LRGDCCHWFLTHFHVDHYQGLTKSFCHGKIYCSSVTANLVHYKIGIPWDRLHVLPLN 707
Query: 197 TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVL 256
+ I GV +T +ANHCPGA +I F +G+ LHTGDFR S M + +L + ++ L
Sbjct: 708 EKITIAGVNLTCFDANHCPGAVIILFEPSNGKAVLHTGDFRFSSEMANNRVLQSSPIHTL 767
Query: 257 YLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG 316
LDTTYCNP+Y FP++E V+ +V+ + PKTL ++G+Y+IGKE +++ +++ L
Sbjct: 768 ILDTTYCNPRYDFPTQEIVIQFVIEAIQ-AEAFNPKTLFLIGSYTIGKERLYMEVARLLQ 826
Query: 317 VKIYANASRRRVLQSFDWP-ELSGNLCTQGNDTLLHVLPMSSL-KFETLKDYLKPYGNQY 374
KIY A++ ++L+ P E+ ++ +HV+PM +L F+ +K Y +++
Sbjct: 827 KKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTLASFKRMKYLSTQYADRF 886
Query: 375 AAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
++AF PTGW++ + G + R +G I Y VPYSEHSSFTELREFV+
Sbjct: 887 DLIVAFCPTGWSFGK--GKKRTPGRKWQQGAIIRYEVPYSEHSSFTELREFVR 937
>gi|51091343|dbj|BAD36078.1| putative SNM1 [Oryza sativa Japonica Group]
gi|51091393|dbj|BAD36136.1| putative SNM1 [Oryza sativa Japonica Group]
Length = 1024
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/353 (40%), Positives = 211/353 (59%), Gaps = 15/353 (4%)
Query: 83 SNSESEANCLFSPP--MKKLKASNGKSTA---THLKKIVDRSCPFYKKIPGTPFTVDAFR 137
S+ + C + P + K SN K+T T K+ D P + IPGTPF VDAFR
Sbjct: 650 SDQRQKKACKVNTPSNLNSQKKSNAKATGGRRTVKGKVKDT--PIWCCIPGTPFRVDAFR 707
Query: 138 YGSIKG-CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELN 196
Y ++G C +FLTHFH DHY GL K + HG IYCS +TA LV + + +H L LN
Sbjct: 708 Y--LRGDCCHWFLTHFHVDHYQGLTKSFCHGKIYCSSVTANLVHYKIGIPWDRLHVLPLN 765
Query: 197 TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVL 256
+ I GV +T +ANHCPGA +I F +G+ LHTGDFR S M + +L + ++ L
Sbjct: 766 EKITIAGVNLTCFDANHCPGAVIILFEPSNGKAVLHTGDFRFSSEMANNRVLQSSPIHTL 825
Query: 257 YLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG 316
LDTTYCNP+Y FP++E V+ +V+ + PKTL ++G+Y+IGKE +++ +++ L
Sbjct: 826 ILDTTYCNPRYDFPTQEIVIQFVIEAIQ-AEAFNPKTLFLIGSYTIGKERLYMEVARLLQ 884
Query: 317 VKIYANASRRRVLQSFDWP-ELSGNLCTQGNDTLLHVLPMSSL-KFETLKDYLKPYGNQY 374
KIY A++ ++L+ P E+ ++ +HV+PM +L F+ +K Y +++
Sbjct: 885 KKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTLASFKRMKYLSTQYADRF 944
Query: 375 AAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
++AF PTGW++ + G + R +G I Y VPYSEHSSFTELREFV+
Sbjct: 945 DLIVAFCPTGWSFGK--GKKRTPGRKWQQGAIIRYEVPYSEHSSFTELREFVR 995
>gi|452987795|gb|EME87550.1| hypothetical protein MYCFIDRAFT_27226 [Pseudocercospora fijiensis
CIRAD86]
Length = 677
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 221/455 (48%), Gaps = 100/455 (21%)
Query: 69 KLKQANLFDMW-GLKSNSESEANCLFS--PPMKKLKASNGKSTATHLKKIVDRSCPFYKK 125
K QAN FD SN +S N L S + A K R+CPFYK
Sbjct: 176 KAGQANPFDFGEASGSNGKSAFNKLMSGHTEEAAWAEAAASENAARGKPSYQRTCPFYKI 235
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
+PG VDAFRYG++KGC AYFL+HFH DHY GL W HGPIYCS +TA LV+ L V
Sbjct: 236 LPGLFICVDAFRYGAVKGCQAYFLSHFHSDHYVGLTSSWRHGPIYCSKVTANLVKQQLRV 295
Query: 186 NPSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCY---------L 231
+P Y+ PLE E I+ GV+VT++ ANHCPG++L F G+ Y L
Sbjct: 296 DPQYVIPLEF--EKTIEVPGTKGVRVTMISANHCPGSSLYLFEKTMGKHYNGNPRLQRIL 353
Query: 232 HTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFPSKEDVLNYV 279
H GDFRA ++ +PLL+ +++V YLDTTY NPKY FPS+E V+
Sbjct: 354 HCGDFRACKMHVQHPLLMPEVQDKVSGKSREQKIDVCYLDTTYLNPKYAFPSQEAVIKAC 413
Query: 280 VRL-----------------------------------------------TKNCLKKQPK 292
+ TK+ ++ + +
Sbjct: 414 ADMCVCLSKDSPGEDDGWETMKRQRAGEGMTKFVRKDSNPEIKEEELDEDTKDDMRTRGR 473
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
LVVVG YSIGKE + L I++AL KIYA S+RR++ + + P L + +H+
Sbjct: 474 LLVVVGTYSIGKERICLGIARALKSKIYAPTSKRRIVAALEDPALDELMTDDPRAAQVHM 533
Query: 353 LPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-------SETVGNQLDL-------- 397
P+ ++ ETL DYLK + + + FRP+GW Y +E+ Q L
Sbjct: 534 TPLFEIRAETLDDYLKDFFPHFTRAVGFRPSGWNYRPPNSRFTESPPVQTVLKSDNWKST 593
Query: 398 --IRPL-----SRGNITIYGVPYSEHSSFTELREF 425
+R L S + +GVPYSEHSSF EL F
Sbjct: 594 YSMRDLVPQRGSSSRASCFGVPYSEHSSFRELTMF 628
>gi|125605833|gb|EAZ44869.1| hypothetical protein OsJ_29509 [Oryza sativa Japonica Group]
Length = 967
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/353 (40%), Positives = 211/353 (59%), Gaps = 15/353 (4%)
Query: 83 SNSESEANCLFSPP--MKKLKASNGKSTA---THLKKIVDRSCPFYKKIPGTPFTVDAFR 137
S+ + C + P + K SN K+T T K+ D P + IPGTPF VDAFR
Sbjct: 593 SDQRQKKACKVNTPSNLNSQKKSNAKATGGRRTVKGKVKDT--PIWCCIPGTPFRVDAFR 650
Query: 138 YGSIKG-CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELN 196
Y ++G C +FLTHFH DHY GL K + HG IYCS +TA LV + + +H L LN
Sbjct: 651 Y--LRGDCCHWFLTHFHVDHYQGLTKSFCHGKIYCSSVTANLVHYKIGIPWDRLHVLPLN 708
Query: 197 TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVL 256
+ I GV +T +ANHCPGA +I F +G+ LHTGDFR S M + +L + ++ L
Sbjct: 709 EKITIAGVNLTCFDANHCPGAVIILFEPSNGKAVLHTGDFRFSSEMANNRVLQSSPIHTL 768
Query: 257 YLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG 316
LDTTYCNP+Y FP++E V+ +V+ + PKTL ++G+Y+IGKE +++ +++ L
Sbjct: 769 ILDTTYCNPRYDFPTQEIVIQFVIEAIQ-AEAFNPKTLFLIGSYTIGKERLYMEVARLLQ 827
Query: 317 VKIYANASRRRVLQSFDWP-ELSGNLCTQGNDTLLHVLPMSSL-KFETLKDYLKPYGNQY 374
KIY A++ ++L+ P E+ ++ +HV+PM +L F+ +K Y +++
Sbjct: 828 KKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTLASFKRMKYLSTQYADRF 887
Query: 375 AAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
++AF PTGW++ + G + R +G I Y VPYSEHSSFTELREFV+
Sbjct: 888 DLIVAFCPTGWSFGK--GKKRTPGRKWQQGAIIRYEVPYSEHSSFTELREFVR 938
>gi|431895428|gb|ELK04944.1| DNA cross-link repair 1A protein [Pteropus alecto]
Length = 1008
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 186/321 (57%), Gaps = 45/321 (14%)
Query: 107 STATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH 166
S A L+K R+CPFYKKIP P
Sbjct: 698 SNAGELRK---RTCPFYKKIPARPVLQ--------------------------------- 721
Query: 167 GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQD 226
+T L++ L V YIH L ++TE V++GVKV LL+ANHCPGA +I F L +
Sbjct: 722 -------ITGNLLKSKLHVQEQYIHSLPVDTECVVNGVKVVLLDANHCPGAVMILFYLPN 774
Query: 227 GQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
G LHTGDFRA M+ LL +V+ LYLDTTYC+P+Y FPS+++V+ + V
Sbjct: 775 GNVTLHTGDFRADPTMERS-LLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAVNTAFEA 833
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
+ P+TLVV G YSIGKE VFLAI+ LG K+ + + + LQ + PE++ + T
Sbjct: 834 VTLNPRTLVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYKTLQCLNIPEINSLITTDMC 893
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNI 406
+L+H+LPM + F+ L+ +LK +Y +LAFRPTGWT+S + + D+I P ++GNI
Sbjct: 894 SSLVHLLPMMKINFKGLQSHLKTCDGRYDQILAFRPTGWTHSNKLTSIADVI-PQTKGNI 952
Query: 407 TIYGVPYSEHSSFTELREFVQ 427
IYG+PYSEHSS+ E++ FVQ
Sbjct: 953 AIYGIPYSEHSSYLEMKRFVQ 973
>gi|407918638|gb|EKG11907.1| DNA repair metallo-beta-lactamase [Macrophomina phaseolina MS6]
Length = 852
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 158/407 (38%), Positives = 208/407 (51%), Gaps = 94/407 (23%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL W HG IYCS
Sbjct: 397 KPAYQRTCPFYKILPGFSICVDAFRYGAVQGCEAYFLSHFHSDHYIGLTANWHHGLIYCS 456
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+TA LVR L V+P +I LE E I GVKVT++ ANHCPG++L F G
Sbjct: 457 RVTANLVRQQLRVDPKWIVDLEWEKETEIPGTGGVKVTMIPANHCPGSSLFLFEKPIGGG 516
Query: 228 -----QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA R +PLL +++V YLDTTY NPKY FP
Sbjct: 517 KQPKMQRVLHCGDFRACRAHIEHPLLRPDLVDTISGKSRQQKIDVCYLDTTYLNPKYAFP 576
Query: 271 SKEDVL----------------------------------NYVVRLTK------------ 284
S+ +V+ N+V + ++
Sbjct: 577 SQGEVIKACADMCVSLNNARADERNGWEQMKRERAGKGMANFVQKSSEPGKEDKEEDVDA 636
Query: 285 ----NCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGN 340
N +K + K LVVVG YSIGKE + L I+KA+ KIYA + RV + + PE++
Sbjct: 637 MKLSNGIKDRGKLLVVVGTYSIGKERMCLGIAKAMDSKIYAPPGKMRVCAALEDPEMNER 696
Query: 341 LCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-------SETVGN 393
L + +H+ P+ ++ ETL DYLK Y + +A + FRPTGW Y +E+
Sbjct: 697 LTRDPREAQVHMTPLFEIRAETLDDYLKDYRDTFARAVGFRPTGWNYRPPNSRFTESPLV 756
Query: 394 QLDL----------IRPLS--RGNI---TIYGVPYSEHSSFTELREF 425
Q L +R L+ RG+ + +GVPYSEHSSF EL F
Sbjct: 757 QTVLHSNNWKSQFSMRDLTPQRGSTSRASCFGVPYSEHSSFRELTMF 803
>gi|238488711|ref|XP_002375593.1| DNA repair protein Pso2/Snm1, putative [Aspergillus flavus
NRRL3357]
gi|220697981|gb|EED54321.1| DNA repair protein Pso2/Snm1, putative [Aspergillus flavus
NRRL3357]
Length = 841
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 162/437 (37%), Positives = 210/437 (48%), Gaps = 98/437 (22%)
Query: 83 SNSESEANCLFSPPMKKLKASNGKSTA----------THLKKIVDRSCPFYKKIPGTPFT 132
S+ S+ + FS KL A N + TA + K+ R+CPFYK IPG
Sbjct: 361 SSGTSKTSSAFS----KLMAGNAEDTAWTAAAASEVKSKGKQAYQRTCPFYKIIPGFSIC 416
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHP 192
VDAFRYG+++GC+AYFL+H+H DHY GL W HGPIYCS T LVR L V+P ++
Sbjct: 417 VDAFRYGAVEGCNAYFLSHYHSDHYIGLTASWRHGPIYCSKATGNLVRQQLKVDPRWVVD 476
Query: 193 LEL--NTEHVIDGVKVTLLEANHCPGAALIHFRLQDG-------QCYLHTGDFRASRLMQ 243
LE TE GV+VTL+EANHCPG+A+ F G Q LH GDFRAS
Sbjct: 477 LEFEKTTEVPNTGVQVTLIEANHCPGSAIFLFEKAMGSGQSKRIQRVLHCGDFRASPTHV 536
Query: 244 SYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL--------- 282
+ LL R++V YLDTTY +PKY FPS+ DV+ L
Sbjct: 537 QHALLRPEIVDSVTGQKRQQRIDVCYLDTTYLSPKYSFPSQIDVIEACAELCASLDGGED 596
Query: 283 --------------------------------TKNCLKKQPKTLVVVGAYSIGKESVFLA 310
+ + Q + LVV+G YSIGKE + LA
Sbjct: 597 EGPAPWQSGKASKEGGGIMSKFFNSVTGSGKSQERSSRPQGRLLVVIGTYSIGKERICLA 656
Query: 311 ISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPY 370
I++AL KIYA A ++RV + ELS L + +H+ + ++ ETL DYL
Sbjct: 657 IARALKSKIYATAGKQRVCACLEDAELSSLLTDDPVEAQVHMQTLFEIRAETLADYLDSM 716
Query: 371 GNQYAAVLAFRPTGWTYSETVGNQLD------------LIRPLSRGNI----------TI 408
+ V+ FRPTGWTY LD P +R ++
Sbjct: 717 KPHFTRVVGFRPTGWTYRPPTERMLDNPPVSTVLHSAHWKTPFTRRDLVPQRGSTRESVC 776
Query: 409 YGVPYSEHSSFTELREF 425
+GVPYSEHSSF EL F
Sbjct: 777 FGVPYSEHSSFRELTMF 793
>gi|317136872|ref|XP_001727344.2| DNA repair protein Pso2/Snm1 [Aspergillus oryzae RIB40]
Length = 826
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 203/421 (48%), Gaps = 94/421 (22%)
Query: 99 KLKASNGKSTA----------THLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYF 148
KL A N + TA + K+ R+CPFYK IPG VDAFRYG+++GC+AYF
Sbjct: 358 KLMAGNAEDTAWTAAAASEVKSKGKQAYQRTCPFYKIIPGFSICVDAFRYGAVEGCNAYF 417
Query: 149 LTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLEL--NTEHVIDGVKV 206
L+H+H DHY GL W HGPIYCS T LVR L V+P ++ LE TE GV+V
Sbjct: 418 LSHYHSDHYIGLTASWRHGPIYCSKATGNLVRQQLKVDPRWVVDLEFEKTTEVPNTGVQV 477
Query: 207 TLLEANHCPGAALIHFRLQDG-------QCYLHTGDFRASRLMQSYPLL----------- 248
TL+EANHCPG+A+ F G Q LH GDFRAS + LL
Sbjct: 478 TLIEANHCPGSAIFLFEKAMGSGQSKRIQRVLHCGDFRASPTHVQHALLRPEIVDSVTGQ 537
Query: 249 -VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL------------------------- 282
R++V YLDTTY +PKY FPS+ DV+ L
Sbjct: 538 KRQQRIDVCYLDTTYLSPKYSFPSQIDVIEACAELCASLDRGEDEGPAPWQSGKASKEGG 597
Query: 283 ----------------TKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRR 326
+ + Q + LVV+G YSIGKE + LAI++AL KIYA A ++
Sbjct: 598 GIMSKFFNSVTGSGKSQERSSRPQGRLLVVIGTYSIGKERICLAIARALKSKIYATAGKQ 657
Query: 327 RVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWT 386
RV + ELS L + +H+ + ++ ETL DYL + V+ FRPTGWT
Sbjct: 658 RVCACLEDAELSSLLTDDPVEAQVHMQTLFEIRAETLADYLDSMKPHFTRVVGFRPTGWT 717
Query: 387 YSETVGNQLD------------LIRPLSRGNI----------TIYGVPYSEHSSFTELRE 424
Y LD P +R ++ +GVPYSEHSSF EL
Sbjct: 718 YRPPTERMLDNPPVSTVLHSAHWKTPFTRRDLVPQRGSTRESACFGVPYSEHSSFRELTM 777
Query: 425 F 425
F
Sbjct: 778 F 778
>gi|426196552|gb|EKV46480.1| hypothetical protein AGABI2DRAFT_185905 [Agaricus bisporus var.
bisporus H97]
Length = 456
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 198/375 (52%), Gaps = 66/375 (17%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I G +AYFL+H H DHY L W GPIYCS +TA
Sbjct: 31 RKAPFYKVLTGMPIAVDAFRYGAIPGVTAYFLSHAHSDHYTNLSSSWKSGPIYCSEVTAN 90
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALI----HFRLQDGQC- 229
L+ L V+ +I PL ++T +I GV+VTL+EANHCPG+ L H + G
Sbjct: 91 LIIYMLSVDKKWIRPLPMDTPTIIPDTGGVQVTLIEANHCPGSCLFLFEGHQTVNAGDST 150
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRAS ++P + +++ +YLDTTY NP+Y FP + V+
Sbjct: 151 FRSTFVGSSRMFRYLHCGDFRASPRHITHPAMTGKKIDCVYLDTTYLNPRYTFPPQPLVI 210
Query: 277 NYVVRLTKNCLKKQPKT-------------------------LVVVGAYSIGKESVFLAI 311
+ L++ L +P T LVVVG YSIGKE + AI
Sbjct: 211 SACAELSRRILAGEPTTVNKTMKSWLPSLPSLKPTAGTKGRILVVVGTYSIGKERIVKAI 270
Query: 312 SKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYG 371
+KAL KIY +A + +L+ D EL L ++ + +H++P+ ++ + LK Y+ +
Sbjct: 271 AKALDSKIYCDARKTALLRCEDDRELESMLTSRPLEATVHLVPLGTIATDRLKIYMDRFD 330
Query: 372 NQYAAVLAFRPTGWTYSETVG-NQLDLI-------------------RPLSRGNITIYGV 411
+ V+ FRPTGWTY++ G +QL I P S +I +YGV
Sbjct: 331 GTFTRVIGFRPTGWTYAQPAGTDQLPSIASILARTSQKDFTYVDLHQSPKSTSSIQVYGV 390
Query: 412 PYSEHSSFTELREFV 426
PYSEHSSF EL F
Sbjct: 391 PYSEHSSFYELTCFA 405
>gi|226288344|gb|EEH43856.1| benzoate 4-monooxygenase [Paracoccidioides brasiliensis Pb18]
Length = 1402
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 204/398 (51%), Gaps = 85/398 (21%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K+ +R+CPFYK +PG VDAFRYG+++GCSAYFL+HFH DHY GL W HG IYCS
Sbjct: 416 KQAYERTCPFYKILPGLSVCVDAFRYGAVEGCSAYFLSHFHSDHYMGLTSSWCHGRIYCS 475
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC 229
+T LVR L V+P +I +E + I GV+VT+L ANHCPG++L F + G+
Sbjct: 476 KITGNLVRQQLKVDPEWITDIEWDEVFEIPETGGVQVTMLPANHCPGSSLFLFEKEVGKG 535
Query: 230 -------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
LH GDFRAS +PLL ++V YLDTTY NPKY FP
Sbjct: 536 PKPKIHRILHCGDFRASPAHVRHPLLRPDVVDSLTGKTKQQTIDVCYLDTTYLNPKYAFP 595
Query: 271 SKEDVLNYVVRLTKNC--------------------------LKKQPKT----------- 293
++EDV+ + N L K P++
Sbjct: 596 NQEDVITACANVCANLDSNENKDVGQATHGPKITAMKTMVDFLSKNPESQTQPGHQRSKS 655
Query: 294 ----LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
LVVVG YSIGKE + +AI++AL KIYA A+++R+ + ELSG L + +
Sbjct: 656 ADRLLVVVGTYSIGKERLCIAIARALNCKIYAPAAKQRICACLEDEELSGLLTSNPIEAQ 715
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG----------------- 392
+H+ + ++ ETL+DYL + ++ V+ F+PTGW Y G
Sbjct: 716 IHMQALMEVRAETLRDYLLSFRPHFSRVVGFQPTGWNYRPPAGRTTDSPPVSSVLYSDSW 775
Query: 393 ----NQLDLI-RPLSRGNITIYGVPYSEHSSFTELREF 425
N DLI + S T Y VPYSEHSSF EL F
Sbjct: 776 QSRFNARDLIPQRGSNPESTCYMVPYSEHSSFRELTMF 813
>gi|393240522|gb|EJD48048.1| DRMBL-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 575
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 193/396 (48%), Gaps = 87/396 (21%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG I G +AYFL+H H DHY L W HGPIYCS TA
Sbjct: 127 RKAPFYKVMQGMPIAVDAFRYGKIPGVTAYFLSHAHSDHYTNLSSSWEHGPIYCSVTTAN 186
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR----LQDGQC- 229
L+ L V+ ++HPL +T V+ GV+VT++EANHCPG++L F + G
Sbjct: 187 LIVHLLGVDRKWVHPLPEDTPTVVPDTGGVEVTVIEANHCPGSSLFLFSGKQTVNAGDSA 246
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRAS +P + R++++YLDTTY N KY FP + V+
Sbjct: 247 FHSHGVGADKVFRYLHCGDFRASPRHVMHPAIKGKRLDLIYLDTTYLNAKYCFPPQAQVI 306
Query: 277 NYVVRLTKNCLKK----------------------------------------------Q 290
L K ++K +
Sbjct: 307 EACADLAKQIVEKANSLGADSGSSPVSGMMDAFVKTQGKGKEKEKEKENAGPVAGTSTGK 366
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
K LVVVG YSIGKE + AI+KAL K++ ++ +R +L+ PEL L + L+
Sbjct: 367 SKMLVVVGTYSIGKERIVKAIAKALNAKVFCDSRKRAILKCQADPELHAMLSSNPKTALV 426
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI----------RP 400
HV+P+ S+ E + +YL G + VLAFRPTGWTY+ G L RP
Sbjct: 427 HVVPLQSISVEKMDEYLDKMGGTFDRVLAFRPTGWTYTPPTGTDLSPAISTVLARADGRP 486
Query: 401 L----------SRGNITIYGVPYSEHSSFTELREFV 426
S I +YGVPYSEHSSF EL F
Sbjct: 487 FTAASLKPGRGSSARIMLYGVPYSEHSSFFELTAFA 522
>gi|325185791|emb|CCA20296.1| DNA crosslink repair protein putative [Albugo laibachii Nc14]
Length = 662
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 199/350 (56%), Gaps = 18/350 (5%)
Query: 95 PPMKKLKAS--NGKSTATHLKKIVDRSCPFYKKIPGTP--FTVDAFRYGSIKGCSAYFLT 150
P M+ + S K + + K++ + CP YK I GT F VD FR+ S S YFLT
Sbjct: 282 PGMRSIGKSWKKPKLDSENAKRVPELKCPEYKIICGTKPRFIVDGFRFASKDLSSVYFLT 341
Query: 151 HFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLE 210
HFH DHY GL K++ G IYCS +TA LV M L V+ YI + +NT I GV+V L+
Sbjct: 342 HFHSDHYIGLTKKFDAGTIYCSQITANLVMMKLRVDAKYICIVAMNTPIFIHGVEVIFLD 401
Query: 211 ANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLV-----------NHRVNVLYLD 259
ANHCPGA +I FR ++ +LHTGDFR M YP L R++ +YLD
Sbjct: 402 ANHCPGACIILFRQKNEMSFLHTGDFRFHPRMLEYPALRPFVDQESTQNEMQRLSGVYLD 461
Query: 260 TTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKI 319
TTY K+ F +E V+ +VV L + Q + + + G Y+IGKE VF+ ++K G K+
Sbjct: 462 TTYAKSKFDFAPQEIVIKHVVGLMEKHYSTQ-RQMYIFGTYTIGKERVFMEVAKHFGKKM 520
Query: 320 YANASRRRVLQSFDWPELSGN-LCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVL 378
+ + RVL + W + + + T DT V+PM SL+ + L L+ Y N++ V+
Sbjct: 521 CVSKEKFRVLSCYGWDKEDMDFITTDSGDTCFFVMPMHSLRMDRLSGLLRSYSNRFDRVV 580
Query: 379 AFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
AFRPTGWT+ + L ++ + +YG+PYSEHSSF+EL +FV+
Sbjct: 581 AFRPTGWTF-QGANASLSKLQKDASDRFRVYGIPYSEHSSFSELCQFVKA 629
>gi|121716440|ref|XP_001275809.1| DNA repair protein Pso2/Snm1, putative [Aspergillus clavatus NRRL
1]
gi|119403966|gb|EAW14383.1| DNA repair protein Pso2/Snm1, putative [Aspergillus clavatus NRRL
1]
Length = 847
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 200/402 (49%), Gaps = 85/402 (21%)
Query: 109 ATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP 168
A+ K+ R+CPFYK IPG VDAFRYG+++GC+AYFL+H+H DHY GL W HGP
Sbjct: 398 ASRGKQAYQRTCPFYKIIPGFSICVDAFRYGAVEGCNAYFLSHYHSDHYIGLTASWRHGP 457
Query: 169 IYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDG---VKVTLLEANHCPGAALIHFRLQ 225
IYCS TA LVR L VN ++ LE + + G V+VT++EANHCPG+A+ F
Sbjct: 458 IYCSRATANLVRQQLKVNGRWLVDLEFEKKTEVPGTNDVQVTMIEANHCPGSAIFLFEKS 517
Query: 226 DG-------QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPK 266
G Q LH GDFRAS + LL +++V YLDTTY +PK
Sbjct: 518 IGSGSSARVQRILHCGDFRASPTHVQHSLLRPDIDDPITGERRQQKIDVCYLDTTYMSPK 577
Query: 267 YKFPSKEDVLNYVVRL-----------------------TKNCLKK-------------- 289
Y FPS+EDV+ L N + K
Sbjct: 578 YAFPSQEDVIEACASLCVSLDQNPEEGVGQSLWQKGSTGAGNVMNKFFSAVSGSRPAQNP 637
Query: 290 ----QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG 345
Q + LVV+G YSIGKE + L I++AL KIYA +++RV + +LS L
Sbjct: 638 SSRPQGRLLVVIGTYSIGKERICLGIARALKSKIYATPAKKRVCACLEDADLSALLTDDP 697
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD--------- 396
+ +H+ + ++ ETL DYL ++ V+ FRPTGWTY G LD
Sbjct: 698 TEAQVHMQTLFEIRAETLADYLDSMKPHFSRVVGFRPTGWTYRPPAGRMLDNPPVSTVLH 757
Query: 397 ---LIRPLS-------RGNI---TIYGVPYSEHSSFTELREF 425
P S RG+ YGVPYSEHSSF EL F
Sbjct: 758 SPHWKTPFSSRDLVPQRGSTRESACYGVPYSEHSSFRELTMF 799
>gi|452001520|gb|EMD93979.1| hypothetical protein COCHEDRAFT_1169437 [Cochliobolus
heterostrophus C5]
Length = 786
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 205/397 (51%), Gaps = 84/397 (21%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG++KG +AYFL+HFH DHY GL W HGPIYCS
Sbjct: 340 KPAYQRTCPFYKIMPGFFIAVDAFRYGAVKGQNAYFLSHFHSDHYVGLSASWKHGPIYCS 399
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+T LVR L V+P ++ L+ + + GV VT++ ANHCPG++L F + G
Sbjct: 400 KVTGNLVRQQLRVDPKWVVDLDFEVKTEVPGTGGVFVTMISANHCPGSSLFLFEKEAGKD 459
Query: 228 -----QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA + +PLL +++ YLDTTY NPKY FP
Sbjct: 460 DNQKLQRVLHCGDFRACQAHVEHPLLRPDVLDAVSGKSRQQKLDACYLDTTYLNPKYAFP 519
Query: 271 SKEDVL----NYVVRLTK----------------------NCLKK--------QPKT--- 293
++ V+ + V L+K N ++K +PK+
Sbjct: 520 PQQQVIQVCADMCVSLSKARADESDGWEKMKRKRAGQGMVNFVQKDSNPENPSEPKSPER 579
Query: 294 ---LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
LVVVG YSIGKE + I+KAL KIYA A+++R+ ++ + PEL L T +
Sbjct: 580 GRLLVVVGTYSIGKERICTGIAKALKSKIYAPANKQRICKALEDPELDALLTTDPRAAQV 639
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGN----------------- 393
H+ P+ ++ ETL DYL+ Y + ++ V+ FRP+GW Y G
Sbjct: 640 HMTPLFEIRAETLDDYLRGYADTFSRVVGFRPSGWNYRPPQGRFTESPQVQTVLHSDNWK 699
Query: 394 ---QLDLIRPL--SRGNITIYGVPYSEHSSFTELREF 425
+ ++P S + +GVPYSEHSSF EL F
Sbjct: 700 STFAMKDLKPQAGSGSRASCFGVPYSEHSSFRELTMF 736
>gi|345569041|gb|EGX51910.1| hypothetical protein AOL_s00043g644 [Arthrobotrys oligospora ATCC
24927]
Length = 856
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 206/413 (49%), Gaps = 85/413 (20%)
Query: 98 KKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHY 157
+ K + + T + K+ R+CPFYK +P VDAFRYG+++G +AYFL+HFH DHY
Sbjct: 394 RAWKEAADEETRSRGKRSFQRTCPFYKILPNLNVAVDAFRYGAVEGTNAYFLSHFHSDHY 453
Query: 158 GGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHC 214
GL W+HGPIYCS +TA L R L V+P YI LE + G VT+++ANHC
Sbjct: 454 IGLSSSWNHGPIYCSRVTANLCRRQLRVDPQYIKELEYEKRTEVPGTGGATVTMIDANHC 513
Query: 215 PGAALIHF-------RLQDGQCYLHTGDFRASRLMQSYPLLV---NHRVNVLYLDTTYCN 264
PG++L F R Q LH GDFRAS +PLL +R+++ YLDTTY N
Sbjct: 514 PGSSLFLFEKTISSPRGARRQRILHCGDFRASAKHLRHPLLSVARKNRIDICYLDTTYLN 573
Query: 265 PKYKFPSKEDVLNYVVRL------------------------------------------ 282
PKY FP ++ V+ + L
Sbjct: 574 PKYAFPPQKQVIEACMELCVSLDKEVEEGKELGFGECRKEGGGIEKFTIPKAPTSEASGS 633
Query: 283 --------TKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW 334
+ +K + K LVVVG YSIGKE + + I++AL KIYA A+++R+ + +
Sbjct: 634 KSDSPTNVVNSSVKTKGKLLVVVGTYSIGKERICMGIARALNCKIYAPANKQRICAALED 693
Query: 335 PELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQ 394
EL+ L + + +H+ P+ ++ ETLK+YL + ++ ++ FRP+GW Y G
Sbjct: 694 DELNSRLTSDPHAAQVHMTPLMEIRPETLKEYLLSFKQRFTKIVGFRPSGWNYRPPTGRL 753
Query: 395 LD----------------------LIRPLSRGNITIYGVPYSEHSSFTELREF 425
+D + + S + +GVPYSEHSSF EL F
Sbjct: 754 VDSPQVQTVLNSQAWRSNYGVTHMVPQRGSTAEVKCFGVPYSEHSSFRELTAF 806
>gi|295672149|ref|XP_002796621.1| DNA cross-link repair protein pso2/snm1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283601|gb|EEH39167.1| DNA cross-link repair protein pso2/snm1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 932
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 205/398 (51%), Gaps = 85/398 (21%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K+ +R+CPFYK +PG VDAFRYG+++GCSAYFL+HFH DHY GL W HG IYCS
Sbjct: 416 KQAYERTCPFYKILPGLSVCVDAFRYGAVEGCSAYFLSHFHSDHYMGLTSSWCHGQIYCS 475
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC 229
+T LVR L V+P +I +E + I GV+VT+L ANHCPG++L F + G+
Sbjct: 476 KITGNLVRHQLKVDPEWITDIEWDEVFEIPETGGVQVTMLPANHCPGSSLFLFEKEVGKG 535
Query: 230 -------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
LH GDFRAS +PLL ++V YLDTTY NPKY FP
Sbjct: 536 PKRKIHRILHCGDFRASPAHVRHPLLRPDVVDSLTGKTKQQTIDVCYLDTTYLNPKYAFP 595
Query: 271 SKEDVLNY--------------------------VVRLTKNCLKKQPKT----------- 293
++EDV+ V+R + L K P++
Sbjct: 596 NQEDVITACANVCANLDSNENKDVGQATHGPKTTVMRTMADFLSKNPESQTQPGHLRSKS 655
Query: 294 ----LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
LVVVG YSIGKE + +AI++AL KIYA A+++ + + ELSG L + +
Sbjct: 656 ADRLLVVVGTYSIGKERLCIAIARALNCKIYAPAAKQGICACLEDEELSGLLTSNPIEAQ 715
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG----------------- 392
+H+ + ++ ETL+DYL + ++ V+ F+PTGW Y G
Sbjct: 716 IHMQALMEVRAETLRDYLLSFRPHFSRVVGFQPTGWNYRPPAGRITDSPPVSSVLYSDSW 775
Query: 393 ----NQLDLI-RPLSRGNITIYGVPYSEHSSFTELREF 425
N DLI + S T Y VPYSEHSSF EL F
Sbjct: 776 QSRFNARDLIPQRGSNPESTCYMVPYSEHSSFRELTMF 813
>gi|115401818|ref|XP_001216497.1| hypothetical protein ATEG_07876 [Aspergillus terreus NIH2624]
gi|114190438|gb|EAU32138.1| hypothetical protein ATEG_07876 [Aspergillus terreus NIH2624]
Length = 957
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 160/430 (37%), Positives = 210/430 (48%), Gaps = 91/430 (21%)
Query: 83 SNSESEANCLFSPPMKKLKASNGKSTA----------THLKKIVDRSCPFYKKIPGTPFT 132
S++ ++ N FS +L A N + TA + K+ R+CPFYK I G
Sbjct: 485 SSASTKPNSAFS----RLMAGNAEDTAWAEAAANEVASRGKQAYQRTCPFYKIITGFSIC 540
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHP 192
VDAFRYG++ GCSAYFL+HFH DHY GL W HGPIYCS TA LVR L V+ ++
Sbjct: 541 VDAFRYGAVDGCSAYFLSHFHSDHYVGLTSSWKHGPIYCSRATANLVRQQLKVDARWLVG 600
Query: 193 LELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-------QCYLHTGDFRASRLM 242
LE + GV+VTL++ANHCPG+AL F G Q LH GDFRAS
Sbjct: 601 LEFERTTEVPGTGGVQVTLIDANHCPGSALFLFEKPTGPNPGSRLQRVLHCGDFRASPTH 660
Query: 243 QSY----PLLVN--------HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL-------- 282
+ P +V+ R++V YLDTTY NPKY FPS++ V+ L
Sbjct: 661 IQHHLLRPEIVDSTTGQKRPQRIDVCYLDTTYLNPKYGFPSQDAVIQACAELSVRLDKGP 720
Query: 283 -------------------------TKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGV 317
T + + + LVVVG YSIGKE + L I++AL
Sbjct: 721 EDGAMSWLTRGVNGMMGKFLSSGKSTDGSSRPKGRLLVVVGTYSIGKERICLGIARALKS 780
Query: 318 KIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAV 377
KIYA A+++RV + ELS L D +H+ + ++ ETL DYL + V
Sbjct: 781 KIYATAAKQRVCACLEDEELSSLLTDNPRDAQVHMQTLFEIRAETLTDYLDSLKPHFTRV 840
Query: 378 LAFRPTGWTYSETVGNQLD----------------------LIRPLSRGNITIYGVPYSE 415
+ FRPTGW+Y G +L+ L + S +GVPYSE
Sbjct: 841 VGFRPTGWSYRPPKGRELENPPVSTVLHSAQWQTPFTVEDLLPQRGSTSESACFGVPYSE 900
Query: 416 HSSFTELREF 425
HSSF EL F
Sbjct: 901 HSSFRELTMF 910
>gi|451849701|gb|EMD63004.1| hypothetical protein COCSADRAFT_37879 [Cochliobolus sativus ND90Pr]
Length = 857
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 201/397 (50%), Gaps = 84/397 (21%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG++KG +AYFL+HFH DHY GL W HGPIYCS
Sbjct: 411 KPAYQRTCPFYKIMPGFFIAVDAFRYGAVKGQNAYFLSHFHSDHYVGLSASWKHGPIYCS 470
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+T LVR L V+P ++ L+ + + GV VT++ ANHCPG++L F + G
Sbjct: 471 KVTGNLVRQQLRVDPKWVVDLDFEVKTEVPGAGGVFVTMISANHCPGSSLFLFEKEVGKG 530
Query: 228 -----QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA + +PLL +++ YLDTTY NPKY FP
Sbjct: 531 NNQKLQRVLHCGDFRACQAHVEHPLLRPDVLDAVSGKSRQQKLDACYLDTTYLNPKYAFP 590
Query: 271 SKEDVL----------------------------------NYVVRLTKNCLKKQPKT--- 293
++ V+ N+V + + +PK+
Sbjct: 591 PQQQVIQACADMCVSLSKTRADESDGWEKMKRKRAGQGMVNFVQKDSNPENSSEPKSPER 650
Query: 294 ---LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
LVVVG YSIGKE + I+KAL KIYA A+++R+ ++ + PEL L T +
Sbjct: 651 GRLLVVVGTYSIGKERICTGIAKALKSKIYAPANKQRICKALEDPELDALLTTDPRAAQV 710
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGN----------------- 393
H+ P+ ++ ETL DYL+ Y + ++ V+ FRP+GW Y G
Sbjct: 711 HMTPLFEIRAETLDDYLRGYADTFSRVVGFRPSGWNYRPPQGRFTESPQVQTVLHSDNWK 770
Query: 394 ---QLDLIRPL--SRGNITIYGVPYSEHSSFTELREF 425
+ ++P S + +GVPYSEHSSF EL F
Sbjct: 771 STFAMKDLKPQAGSGSRASCFGVPYSEHSSFRELTMF 807
>gi|157129880|ref|XP_001661798.1| DNA cross-link repair protein pso2/snm1 [Aedes aegypti]
gi|108872037|gb|EAT36262.1| AAEL011626-PA [Aedes aegypti]
Length = 778
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 191/331 (57%), Gaps = 18/331 (5%)
Query: 99 KLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYG 158
K A+ GK ++IV CP YK I GT F VDAFRYG I+G S YFL+HFH DHY
Sbjct: 344 KTPATTGKRQG---RRIV---CPKYKIIAGTNFAVDAFRYGDIEGVSHYFLSHFHADHYI 397
Query: 159 GLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAA 218
GL KR P+ SP+T+RLV+ + V SY ++L+ VID V++T L+ANHCPGA
Sbjct: 398 GL-KRSFAKPLIMSPITSRLVKAFINVEESYYQLIDLHETIVIDNVRITALDANHCPGAV 456
Query: 219 LIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNY 278
+ F+L G LHTGDFRAS M+ YP N ++ +YLDTTY + KY F S+ + +
Sbjct: 457 MFLFQLPTGTNILHTGDFRASSEMEEYPEFWNMEIHSIYLDTTYLSSKYAFKSQWESITD 516
Query: 279 VVRLTKNCLKKQ--PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
+ + L + + L+V G+Y IGKE V+ ++ K++ +RR+ L + D P
Sbjct: 517 ACDVVRTILNRNIGARVLIVCGSYLIGKEKVWAELAAQFNYKVWTEPNRRKALVAVDDPL 576
Query: 337 LSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD 396
L +HVL M+ L ++ L Y++ + ++Y ++A RP+GW +
Sbjct: 577 QQQWLVEDPKFADIHVLSMNKLSYDELVSYVEQFPDRYDLLIALRPSGWEKNS------- 629
Query: 397 LIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
RP RG I I GV YSEHSSF EL+ FV+
Sbjct: 630 --RPQYRGRINIVGVEYSEHSSFNELKRFVR 658
>gi|296805702|ref|XP_002843675.1| DNA cross-link repair protein pso2/snm1 [Arthroderma otae CBS
113480]
gi|238844977|gb|EEQ34639.1| DNA cross-link repair protein pso2/snm1 [Arthroderma otae CBS
113480]
Length = 853
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 207/404 (51%), Gaps = 81/404 (20%)
Query: 103 SNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK 162
++ + A+ ++ +R+CPFYK +PG TVDAF+YG+I+GCSAYFL+H+H DHYGGL
Sbjct: 400 ASAREEASRGRQAYERTCPFYKILPGFSITVDAFKYGAIEGCSAYFLSHYHSDHYGGLTS 459
Query: 163 RWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAAL 219
WSHGPIYCS +TA LV+ + V+P + LE I DGV VT++ ANHCPG++L
Sbjct: 460 SWSHGPIYCSKITANLVKQQIKVSPDMVFELEFEKRTEIPGTDGVSVTMITANHCPGSSL 519
Query: 220 IHFRLQDGQC-------YLHTGDFRASRLMQSYPL------------LVNHRVNVLYLDT 260
F G LH GDFRA ++PL L +++V YLDT
Sbjct: 520 FLFEKSIGNGKAARVHRILHCGDFRACSAHINHPLLRPDIKDPHTGQLTQQKIDVCYLDT 579
Query: 261 TYCNPKYKFPSKEDVLNYVVRL------------------------------TKNC---- 286
TY NPKY FP ++DV++ ++ +KN
Sbjct: 580 TYLNPKYAFPFQQDVIDACAQMCAGINEGFSDTFGAGKGQAMSGSMAPFLQRSKNSGRTS 639
Query: 287 ---LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCT 343
+ + K LVV+G YSIGKE + L +++AL KIY + S++RV + ELS L T
Sbjct: 640 AEGQRDRGKLLVVIGTYSIGKERICLGVARALNSKIYVSPSKKRVCTCLEDDELSSVLTT 699
Query: 344 QGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD------- 396
+ +H+ + ++ ETL +YL + ++ ++ RPTGW+Y G D
Sbjct: 700 DPLEAQVHMHSLMDMRSETLSEYLNSLKSHFSRIIGIRPTGWSYRPRGGTWADNPTVSSV 759
Query: 397 ----LIRPL--------SRGNI---TIYGVPYSEHSSFTELREF 425
+P RG+ + VPYSEHSSF EL F
Sbjct: 760 LHSEAWKPRFSVSDLVPQRGSTKEAACFSVPYSEHSSFRELTMF 803
>gi|195152475|ref|XP_002017162.1| GL21672 [Drosophila persimilis]
gi|194112219|gb|EDW34262.1| GL21672 [Drosophila persimilis]
Length = 637
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 197/329 (59%), Gaps = 13/329 (3%)
Query: 102 ASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG 161
S+ K + K+ + CP YK + GT F VD F++G I G + YFLTHFH DHY GL
Sbjct: 172 TSSEKIVSNGRKQRTPKPCPPYKVVEGTHFCVDGFQFGVIPGVTHYFLTHFHADHYIGLT 231
Query: 162 KRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIH 221
K+++ P++ SPLTARLVR + ++ YIH ++++ ++D +++T +EANHCPGA +
Sbjct: 232 KKFAF-PLFMSPLTARLVRAFIKIDEMYIHEIDVDQTILVDNIQITGIEANHCPGALMFF 290
Query: 222 FRLQDGQCYLHTGDFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVV 280
F++ G+C LHTGDFRAS M+S P+ N+ +++LYLDTTY + Y F + + ++ V
Sbjct: 291 FKMSSGECILHTGDFRASFEMESLPIFWNNIDIDLLYLDTTYLSGNYDFCHQTESVDRAV 350
Query: 281 RLTKNCLKKQP--KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELS 338
+ + ++ P + L V G+Y IGKE ++LA+++ + ++ A RR + +WP+L
Sbjct: 351 YMVQKFHERYPGKRILYVCGSYVIGKEKIWLALAEKFSLTVWTEAHRRIAIDCLEWPDLQ 410
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI 398
L LHV+ M + + L +Y K + +QY +LA RP+GW +
Sbjct: 411 SRLNDDPYQANLHVIGMGKVTYLVLAEYFKQFEDQYDMLLAIRPSGWEKNS--------- 461
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+P I+I G+ YSEHSS+ EL FV+
Sbjct: 462 KPSYGKRISIIGIEYSEHSSYKELERFVR 490
>gi|425767838|gb|EKV06391.1| DNA repair protein Pso2/Snm1, putative [Penicillium digitatum
PHI26]
gi|425783769|gb|EKV21590.1| DNA repair protein Pso2/Snm1, putative [Penicillium digitatum Pd1]
Length = 844
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/418 (37%), Positives = 211/418 (50%), Gaps = 92/418 (22%)
Query: 99 KLKASNGKSTA----------THLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYF 148
K+ A N + TA + K+ R+CPFYK +PG VDAFRYG+++GC+AYF
Sbjct: 380 KMMAGNAEDTAWATAAANELSSRGKQAYQRTCPFYKILPGFSICVDAFRYGAVEGCNAYF 439
Query: 149 LTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVK 205
L+HFH DHY GL K W HGPIYCS TA LVR L V+P ++ LE + + GV+
Sbjct: 440 LSHFHSDHYIGLSKSWCHGPIYCSRPTANLVRQQLRVDPKWVVDLEFESTTEVPETGGVR 499
Query: 206 VTLLEANHCPGAALIHFRLQDG-------QCYLHTGDFRASRLMQSYPLL---------- 248
VT++ ANHCPG++L F G Q LH GDFRAS +PLL
Sbjct: 500 VTMIHANHCPGSSLFLFEKSYGNSPNASKQRVLHCGDFRASPAQVQHPLLRPDVIIPVTG 559
Query: 249 --VNHRVNVLYLDTTYCNPKYKFPSKEDVLN----YVVRLT----------KN------- 285
++ YLDTTY +PKY FP++EDV+ VRL KN
Sbjct: 560 KPRQQHIDKCYLDTTYLSPKYGFPAQEDVITACSELCVRLNHETGVGLDAGKNDTGGLMG 619
Query: 286 -----------CLKKQPKT----LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
L K + LVV+G YSIGKE + + I++ALG KI+A ++R+
Sbjct: 620 KFLSVATGINKALDKGSQAGGRLLVVIGTYSIGKERICMGIARALGSKIFATPPKQRICA 679
Query: 331 SFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSET 390
+ PEL+ L ++ +H+ + ++ +TL DYL ++ V+ FRPTGWTY
Sbjct: 680 CLEDPELTAMLTNNPHEAQVHMQTLFEIRADTLADYLDGLKPHFSRVVGFRPTGWTYRPP 739
Query: 391 VGNQLDLIRPLS--------------------RGNI---TIYGVPYSEHSSFTELREF 425
G +L P+S RG+ +GVPYSEHSSF EL F
Sbjct: 740 AG-RLVQNPPVSTVLHGENWKSPYTSQDLTPQRGSTRESACFGVPYSEHSSFRELTMF 796
>gi|398410702|ref|XP_003856699.1| hypothetical protein MYCGRDRAFT_54222, partial [Zymoseptoria
tritici IPO323]
gi|339476584|gb|EGP91675.1| hypothetical protein MYCGRDRAFT_54222 [Zymoseptoria tritici IPO323]
Length = 618
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 203/403 (50%), Gaps = 95/403 (23%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK +PG VDAFRYG++KGC AYFL+HFH DHY GL W+HGPIYCS +TA
Sbjct: 173 RTCPFYKILPGLFICVDAFRYGAVKGCQAYFLSHFHSDHYIGLTSTWTHGPIYCSKVTAN 232
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVK---VTLLEANHCPGAALIHFRLQDG------- 227
LV+ L V+P Y+ L+ I G K VT++ ANHCPG++L F G
Sbjct: 233 LVKQQLRVDPKYVIALDWEKPWEIPGTKGVTVTMISANHCPGSSLYLFEKTIGRKTNGEP 292
Query: 228 --QCYLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFPSKE 273
Q LH GDFRA R+ +PLL+ +++V YLDTTY NPKY FP +E
Sbjct: 293 RQQRILHCGDFRACRMHVEHPLLMPDIRDKVTGKTKEQKIDVCYLDTTYLNPKYAFPEQE 352
Query: 274 DVL----NYVVRLTK--------------------------------------------- 284
V+ + V L+K
Sbjct: 353 AVIKACADMCVCLSKDTPDETDGWEQMKRQRAGEGMVKFVRKESNTAIKEEEPVDPSSVG 412
Query: 285 NCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQ 344
N K + + LVVVG YSIGKE + L I++AL KIYA S++R++ + + PEL + +
Sbjct: 413 NMKKTRGRLLVVVGTYSIGKERICLGIARALQAKIYAPPSKQRIVAALEDPELDSLMTSN 472
Query: 345 GNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS------------ETV- 391
+ +H+ P+ ++ ETL DYLK + + + FRP+GW Y +TV
Sbjct: 473 PREAQVHMTPLFEIRAETLDDYLKDFFPHFTRAVGFRPSGWNYRPPNSRFVESPLVQTVL 532
Query: 392 -------GNQLDLIRPL--SRGNITIYGVPYSEHSSFTELREF 425
G + + P S + +GVPYSEHSSF EL F
Sbjct: 533 HSDNWKSGYSMRELVPQRGSTSRASCFGVPYSEHSSFRELTMF 575
>gi|390178816|ref|XP_001359351.3| GA10012 [Drosophila pseudoobscura pseudoobscura]
gi|388859601|gb|EAL28496.3| GA10012 [Drosophila pseudoobscura pseudoobscura]
Length = 787
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 197/329 (59%), Gaps = 19/329 (5%)
Query: 102 ASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG 161
ASNG+ K+ + CP YK + GT F VD F++G I G + YFLTHFH DHY GL
Sbjct: 328 ASNGR------KQRTPKPCPPYKVVEGTHFCVDGFQFGVIPGVTHYFLTHFHADHYIGLT 381
Query: 162 KRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIH 221
K+++ P++ SPLTARLV+ + ++ YIH ++++ ++D +++T +EANHCPGA +
Sbjct: 382 KKFAF-PLFMSPLTARLVQAFIKIDEMYIHEIDVDQTILVDNIQITGIEANHCPGALMFF 440
Query: 222 FRLQDGQCYLHTGDFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVV 280
F+L G+C LHTGDFRAS M+S P+ N+ +++LYLDTTY + Y F + + ++ V
Sbjct: 441 FKLSSGECILHTGDFRASFEMESLPIFWNNIDIDLLYLDTTYLSGNYDFCHQTESVDRAV 500
Query: 281 RLTKNCLKKQP--KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELS 338
+ + ++ P + L V G+Y IGKE ++L +++ + ++ A RR + +WP+L
Sbjct: 501 YMVQKFHERNPGKRILYVCGSYVIGKEKIWLTLAEKFSLTVWTEAHRRMAIDCLEWPDLQ 560
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI 398
L LHV+ M + + L +Y K + +QY +LA RP+GW +
Sbjct: 561 SRLNDDPYQANLHVIGMGKVTYLVLAEYFKQFEDQYDMLLAIRPSGWEKNS--------- 611
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+P I+I G+ YSEHSS+ EL FV+
Sbjct: 612 KPSYGRRISIIGIEYSEHSSYKELERFVR 640
>gi|428170906|gb|EKX39827.1| hypothetical protein GUITHDRAFT_76035 [Guillardia theta CCMP2712]
Length = 317
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/322 (40%), Positives = 198/322 (61%), Gaps = 21/322 (6%)
Query: 116 VDRSCPFYKKIPG-TPFTVDAF--RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
V S F+ +PG + FTVD F R +K Y L+HFH DHY GL K+++ G IYC+
Sbjct: 7 VTGSNAFHHSVPGASSFTVDNFHVRNSVVK---HYILSHFHADHYAGLRKKFNSGKIYCT 63
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLH 232
P+TARLV++ + V+ ++ + ++ +I+G +VT L ANHCPG+ALI F DG+C+LH
Sbjct: 64 PVTARLVKLKIGVSADHLVAVAYHSPLLIEGTRVTFLPANHCPGSALILFETPDGKCHLH 123
Query: 233 TGDFRASRLMQSYPLLV------NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
TGDFR P+L + +++ L+LDTTYC+P+++FP++ED + +V L K+
Sbjct: 124 TGDFRFHPKFSEDPVLSSFTSTGSRKIDHLFLDTTYCSPEHEFPAQEDAIRFVGELVKSN 183
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPEL-SGNLCTQG 345
+TL +VG+Y+IGKE VFL ++ G K+Y + ++++VL+ + E L T
Sbjct: 184 AFANRETLFLVGSYTIGKEEVFLQAARESGCKLYVHPAKKKVLECLELKEEDQQRLTTVA 243
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGN 405
++ LHV+PM + F+ + YL +Y V+ RPTGWT+S + RG
Sbjct: 244 HEARLHVVPMGCINFKQMSAYLGMAKGKYKTVVGIRPTGWTFSGGPRQE--------RGP 295
Query: 406 ITIYGVPYSEHSSFTELREFVQ 427
+ IYGVPYSEHSSF+E+R V+
Sbjct: 296 LVIYGVPYSEHSSFSEIRSMVK 317
>gi|347838544|emb|CCD53116.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1001
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 203/407 (49%), Gaps = 94/407 (23%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG++KGC+AYFL+HFH DHY GL WSHGPIYCS
Sbjct: 543 KPAYQRTCPFYKIMPGLFICVDAFRYGAVKGCNAYFLSHFHSDHYIGLTSTWSHGPIYCS 602
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+T LV+ L V+P ++ +E + + + GV V ++ ANHCPG++L F G
Sbjct: 603 KVTGNLVKQQLKVDPKWVVSIEFDDKLEVPNTQGVSVIMIPANHCPGSSLFLFEKTTGGG 662
Query: 228 -----QCYLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA ++PLL+ +++V YLDTTY NPKY FP
Sbjct: 663 QRPKVQRILHCGDFRACPAHIAHPLLMPNVVDSVNGKTKQQKIDVCYLDTTYLNPKYSFP 722
Query: 271 SKEDVLNYVVRL------------------------------------------------ 282
S++DV+ +
Sbjct: 723 SQDDVVKACADMCVSLSKEKAEESDAWETVKRERAGSKMTNFIKPSLKIEAEDSETPDTS 782
Query: 283 TKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLC 342
+K+ K + + LVV G YSIGKE + L I++AL KIYA + R+ + + PEL+ L
Sbjct: 783 SKSKEKARGRLLVVCGTYSIGKERIVLGIARALDCKIYATPGKMRICAALEDPELTSRLT 842
Query: 343 TQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSE------------- 389
+ + +H+ + L+ ETL+DYL Y + V+ FRP+GW+Y
Sbjct: 843 SDPREAQIHMQMLMDLRPETLQDYLTGYKPHFTRVVGFRPSGWSYKPPNSRFVDSPPIHT 902
Query: 390 --TVGN-----QLDLIRPLSRGNI---TIYGVPYSEHSSFTELREFV 426
T GN + + P RG+ +GVPYSEHSSF EL FV
Sbjct: 903 ILTAGNWRSEYNMGELVP-QRGSTKEAQCFGVPYSEHSSFRELTMFV 948
>gi|255930809|ref|XP_002556961.1| Pc12g00580 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581580|emb|CAP79685.1| Pc12g00580 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 845
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 217/430 (50%), Gaps = 92/430 (21%)
Query: 87 SEANCLFSPPMKKLKASNGKSTA----------THLKKIVDRSCPFYKKIPGTPFTVDAF 136
S N + K+ A N + TA + K+ R+CPFYK IPG VDAF
Sbjct: 369 SRQNPIGGSAFSKMMAGNAEDTAWATAAANEVSSRGKQAYQRTCPFYKIIPGFSICVDAF 428
Query: 137 RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELN 196
RYG+++GC AYFL+HFH DHY GL K W HGPIYCS TA LVR L V+P +I ++
Sbjct: 429 RYGAVEGCKAYFLSHFHSDHYIGLNKSWCHGPIYCSRPTANLVRQQLRVDPKWIIDVDFE 488
Query: 197 TEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-------QCYLHTGDFRAS------R 240
+ + GV+VT+L ANHCPG++L F G Q LH GDFRAS R
Sbjct: 489 STTEVPETGGVRVTMLHANHCPGSSLFLFEKSSGAGPNAYNQRVLHCGDFRASPAHVQHR 548
Query: 241 LMQ---SYPLLVNHR---VNVLYLDTTYCNPKYKFPSKEDVL----NYVVRLTKNC---- 286
L++ + P+ R ++ YLDTTY +PKY FP++EDV+ + VRL +
Sbjct: 549 LLRPNVTNPVTEKPRQQHIDKCYLDTTYLSPKYGFPAQEDVITACADLCVRLNQEAGVGP 608
Query: 287 --------------------LKKQP--------KTLVVVGAYSIGKESVFLAISKALGVK 318
K P + LVV+G YSIGKE + + I+KALG K
Sbjct: 609 DTGKNGTSGLMGKFLSAATGSNKPPGKSSHVGGRLLVVIGTYSIGKERICMGIAKALGSK 668
Query: 319 IYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVL 378
I+A ++R+ + PELS L + ++ +H+ + ++ +TL +YL ++ V+
Sbjct: 669 IFATPPKQRICACLEDPELSAMLTSNPHEAQVHMQTLFEIRADTLAEYLDGLKPHFSRVV 728
Query: 379 AFRPTGWTYSETVGNQLDLIRPLS--------------------RGNI---TIYGVPYSE 415
FRPTGW Y G +L P+S RG+ +GVPYSE
Sbjct: 729 GFRPTGWNYRPPAG-RLIQNPPVSTVLHGEHWKSPYTSEDLTPQRGSTRESACFGVPYSE 787
Query: 416 HSSFTELREF 425
HSSF EL F
Sbjct: 788 HSSFRELTMF 797
>gi|195109660|ref|XP_001999401.1| GI24489 [Drosophila mojavensis]
gi|193915995|gb|EDW14862.1| GI24489 [Drosophila mojavensis]
Length = 662
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/319 (37%), Positives = 189/319 (59%), Gaps = 13/319 (4%)
Query: 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYC 171
LK+ + CP YK + T F VD F++G I + YFL+H+H DHY GL ++++H P+Y
Sbjct: 231 LKERKRKRCPSYKIVEDTTFVVDGFQFGDIPNATHYFLSHYHADHYVGLTRKFAH-PLYM 289
Query: 172 SPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYL 231
SP+TA+LVR + ++ Y+H +E+ ++ ++VT ++ANHCPGA ++ F+ G+C L
Sbjct: 290 SPITAKLVRTFIPIDNQYMHEIEVGESITLNEIEVTAIDANHCPGAIMLMFKFTTGKCIL 349
Query: 232 HTGDFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
HTGDFRAS M+S P+ N +++VLYLDTTY + Y F + D ++ + + +K
Sbjct: 350 HTGDFRASFEMESLPIFWNEPQIDVLYLDTTYLSKNYDFCHQSDSIDRIRTAVRQFHEKN 409
Query: 291 P--KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
+ L V G+Y IGKE V+LA+ + ++++ RR+ + DWPEL +LC +
Sbjct: 410 ADKRILHVCGSYLIGKEKVWLALVEEFSLRVWTEPHRRKAIDCLDWPELQLSLCDNPLEA 469
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITI 408
LHV+ M + + +L Y K + Y +L RP+GW + +P I++
Sbjct: 470 NLHVINMGKISYPSLDQYFKAFEGHYDMLLGIRPSGWEKNS---------KPSYGKRISV 520
Query: 409 YGVPYSEHSSFTELREFVQ 427
GV YSEHSS+ EL FV+
Sbjct: 521 IGVEYSEHSSYKELERFVR 539
>gi|396472511|ref|XP_003839135.1| hypothetical protein LEMA_P028080.1 [Leptosphaeria maculans JN3]
gi|312215704|emb|CBX95656.1| hypothetical protein LEMA_P028080.1 [Leptosphaeria maculans JN3]
Length = 965
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 207/397 (52%), Gaps = 84/397 (21%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG++KG +AYFL+HFH DHY GL W+HGPIYCS
Sbjct: 451 KPAFQRTCPFYKIMPGFFIAVDAFRYGAVKGQNAYFLSHFHSDHYIGLTSSWAHGPIYCS 510
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC 229
+T LVR L V+P ++ L+ + + GV VT++ ANHCPG++L F + GQ
Sbjct: 511 KVTGNLVRQQLRVDPKWVVDLDFEKKTEVPGTQGVHVTMISANHCPGSSLFLFEKETGQG 570
Query: 230 -------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
LH GDFRA + +PLL +++ YLDTTY NPKY FP
Sbjct: 571 KMMKLQRVLHCGDFRACQAHIEHPLLRPDVLDAVSGKNRKQKLDACYLDTTYLNPKYAFP 630
Query: 271 SKEDV----------LNYV-----------------------VRLTKNCLKK-QPKT--- 293
++ V LN V VR N +PK+
Sbjct: 631 PQQQVIQACADMCVSLNKVNADESDGWEQMKRERAGQGMVKFVRKDSNIRNPDEPKSPQR 690
Query: 294 ---LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
LV+VG YSIGKE + I+KAL KIYA +++R+ ++ + PEL L T D +
Sbjct: 691 GRLLVIVGTYSIGKERICTGIAKALKSKIYAPPNKQRICKALEDPELDALLTTDPRDAQV 750
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-------SETVGNQLDL------ 397
H+ P+ ++ ETL DYL+ Y + ++ + FRP+GW Y +E+ Q L
Sbjct: 751 HMTPLFEIRAETLDDYLRDYADTFSRAVGFRPSGWNYRPPNSRFTESPAVQTVLHSQNWK 810
Query: 398 ----IRPLS--RGNI---TIYGVPYSEHSSFTELREF 425
++ L+ RG+ + +GVPYSEHSSF EL F
Sbjct: 811 SSFSMKDLAPQRGSTSRASCFGVPYSEHSSFRELSMF 847
>gi|409081319|gb|EKM81678.1| hypothetical protein AGABI1DRAFT_70037 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 456
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 195/375 (52%), Gaps = 66/375 (17%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I G +AYFL+H H DHY L W GPIYCS +TA
Sbjct: 31 RKAPFYKVLTGMPIAVDAFRYGAIPGVTAYFLSHAHSDHYTNLSSSWKSGPIYCSEVTAN 90
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALI----HFRLQDGQC- 229
L+ L V+ +I PL ++T +I GV+VTL+EANHCPG+ L H + G
Sbjct: 91 LIIYMLSVDKKWIRPLPMDTPTIIPDTGGVQVTLIEANHCPGSCLFLFEGHQTVNAGDST 150
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRAS +P + +++ +YLDTTY NP+Y FP + V+
Sbjct: 151 FRSTFVGSSRMFRYLHCGDFRASPRHIMHPAMAGKKIDCVYLDTTYLNPRYTFPPQPLVI 210
Query: 277 NYVVRLTKNCLKKQPKT-------------------------LVVVGAYSIGKESVFLAI 311
+ L++ +P T LVVVG YSIGKE + AI
Sbjct: 211 SACAELSRRLFAGEPTTVNKTMKSWLPSLPSLKPTAGTKGRILVVVGTYSIGKERIVKAI 270
Query: 312 SKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYG 371
+ AL KIY +A + +L+ D EL L ++ + +H++P+ ++ + LK Y+ +
Sbjct: 271 ANALDSKIYCDARKTALLRCEDDRELESMLTSRPLEATVHLVPLGTITTDRLKIYMDRFD 330
Query: 372 NQYAAVLAFRPTGWTYSETVG-NQLDLI-------------------RPLSRGNITIYGV 411
+ V+ FRPTGWTY++ G +QL I P S +I +YGV
Sbjct: 331 GTFTRVIGFRPTGWTYTQPAGTDQLPSIASILARTSQKDFTYVDLHQSPKSTSSIQVYGV 390
Query: 412 PYSEHSSFTELREFV 426
PYSEHSSF EL F
Sbjct: 391 PYSEHSSFYELTCFA 405
>gi|330923075|ref|XP_003300087.1| hypothetical protein PTT_11241 [Pyrenophora teres f. teres 0-1]
gi|311325940|gb|EFQ91820.1| hypothetical protein PTT_11241 [Pyrenophora teres f. teres 0-1]
Length = 897
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 204/397 (51%), Gaps = 84/397 (21%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG++KG +AYFL+HFH DHY GL W HGPIYCS
Sbjct: 451 KPAYQRTCPFYKIMPGFFIAVDAFRYGAVKGQNAYFLSHFHSDHYVGLTASWKHGPIYCS 510
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+T LVR L V+P ++ LE + + +GV VT++ ANHCPG++L F + G
Sbjct: 511 KVTGNLVRQQLRVDPKWVVDLEFEEKTEVPGTEGVFVTMISANHCPGSSLFLFEKEIGKG 570
Query: 228 -----QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA + +PLL +++ YLDTTY NPKY FP
Sbjct: 571 KSPRLQRVLHCGDFRACQAHVEHPLLRPNVLDAVSGKNRQQKLDACYLDTTYLNPKYAFP 630
Query: 271 SKEDVL----NYVVRLTK---------NCLKK---------------------QPKT--- 293
++ V+ + V L+K +K+ +PK+
Sbjct: 631 PQQQVIQACADMCVSLSKVRTDESDGWEKMKRERAGQGMVQFVRKESDQDNPAEPKSPER 690
Query: 294 ---LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
LVVVG YSIGKE + I+KAL KIYA +++R+ ++ + PEL L T +
Sbjct: 691 GRLLVVVGTYSIGKERICTGIAKALNSKIYAPTNKQRICKALEDPELDALLTTDPRAAQV 750
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG------------------ 392
H+ P+ ++ +TL DYL+ Y + ++ ++ FRP+GW Y G
Sbjct: 751 HMTPLFEIRADTLDDYLREYADSFSRIVGFRPSGWNYRPPKGRFTESPQVQTVLHSDNWK 810
Query: 393 ---NQLDLIRPLSRGN-ITIYGVPYSEHSSFTELREF 425
+ DL G+ + +GVPYSEHSSF EL F
Sbjct: 811 STFSMKDLTPQAGSGSRASCFGVPYSEHSSFRELTMF 847
>gi|449447365|ref|XP_004141439.1| PREDICTED: uncharacterized protein LOC101218609 [Cucumis sativus]
Length = 774
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 197/327 (60%), Gaps = 8/327 (2%)
Query: 105 GKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKG-CSAYFLTHFHYDHYGGLGKR 163
GK+ +++ + P + IPGTPF VDAFR+ ++G C +FLTHFH DHY GL K
Sbjct: 425 GKTAKRNVRNRKLGNVPVWSCIPGTPFRVDAFRH--LRGDCFHWFLTHFHMDHYQGLTKS 482
Query: 164 WSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR 223
+ HG IYCS +TA+LV M + + + L L+ + I GV VT +ANHCPG+ +I F
Sbjct: 483 FCHGMIYCSTITAKLVNMKIGIPWERLQVLPLDQKINIAGVDVTCFDANHCPGSIIILFE 542
Query: 224 LQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
+G+ LHTGDFR M + R++ L LDTTYC+P+Y FP +E V+ +V+
Sbjct: 543 PPNGKAVLHTGDFRFCEQMGGLSVFQTCRIHTLVLDTTYCDPQYDFPKQETVIQFVIDAI 602
Query: 284 KNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW-PELSGNLC 342
+ PKTL ++G Y+IGKE +FL +++ L K+Y A++ R+L+ + E
Sbjct: 603 Q-AEAFNPKTLFLIGCYTIGKERLFLEVARVLRKKVYVTAAKLRILKCLGFSAEDMKWFT 661
Query: 343 TQGNDTLLHVLPMSSL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL 401
++ +HV+P+ +L F+ LK Y N+++ ++AF PTGW S+ G + R
Sbjct: 662 VNERESHIHVVPLWTLASFKRLKHVSTQYANRFSLIVAFSPTGWALSK--GKKKSPGRRW 719
Query: 402 SRGNITIYGVPYSEHSSFTELREFVQV 428
+G I Y VPYSEHSSF+EL++FV++
Sbjct: 720 QQGTIIRYEVPYSEHSSFSELKDFVKL 746
>gi|449486809|ref|XP_004157409.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101218609
[Cucumis sativus]
Length = 774
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 197/327 (60%), Gaps = 8/327 (2%)
Query: 105 GKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKG-CSAYFLTHFHYDHYGGLGKR 163
GK+ +++ + P + IPGTPF VDAFR+ ++G C +FLTHFH DHY GL K
Sbjct: 425 GKTAKRNVRNRKLGNVPVWSCIPGTPFRVDAFRH--LRGDCFHWFLTHFHMDHYQGLTKS 482
Query: 164 WSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR 223
+ HG IYCS +TA+LV M + + + L L+ + I GV VT +ANHCPG+ +I F
Sbjct: 483 FCHGMIYCSTITAKLVNMKIGIPWERLQVLPLDQKINIAGVDVTCFDANHCPGSIIILFE 542
Query: 224 LQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
+G+ LHTGDFR M + R++ L LDTTYC+P+Y FP +E V+ +V+
Sbjct: 543 PPNGKAVLHTGDFRFCEQMGGLSVFQTCRIHTLVLDTTYCDPQYDFPKQETVIQFVIDAI 602
Query: 284 KNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW-PELSGNLC 342
+ PKTL ++G Y+IGKE +FL +++ L K+Y A++ R+L+ + E
Sbjct: 603 Q-AEAFNPKTLFLIGCYTIGKERLFLEVARVLRKKVYVTAAKLRILKCLGFSAEDMKWFT 661
Query: 343 TQGNDTLLHVLPMSSL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL 401
++ +HV+P+ +L F+ LK Y N+++ ++AF PTGW S+ G + R
Sbjct: 662 VNERESHIHVVPLWTLASFKRLKHVSTQYANRFSLIVAFSPTGWALSK--GKKKSPGRRW 719
Query: 402 SRGNITIYGVPYSEHSSFTELREFVQV 428
+G I Y VPYSEHSSF+EL++FV++
Sbjct: 720 QQGTIIRYEVPYSEHSSFSELKDFVKL 746
>gi|317031918|ref|XP_001393666.2| DNA repair protein Pso2/Snm1 [Aspergillus niger CBS 513.88]
Length = 818
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 198/408 (48%), Gaps = 84/408 (20%)
Query: 102 ASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG 161
A+ A+ K+ R+CPFYK IPG VDAFRYG+++GC+AYFL+HFH DHY GL
Sbjct: 363 AAAANEVASRGKQAYQRTCPFYKIIPGFSLCVDAFRYGAVEGCNAYFLSHFHSDHYIGLT 422
Query: 162 KRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAA 218
W HGPIYCS TA LV L V+ ++ PLE + I G +VTL+EANHCPG+A
Sbjct: 423 GSWRHGPIYCSRPTANLVCQQLKVDRKWLVPLEFERKTEIPDTGGAQVTLIEANHCPGSA 482
Query: 219 LIHFRLQDGQC-------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLD 259
+ F G LH GDFRAS L + LL R++ YLD
Sbjct: 483 IFLFEKSMGSGPSQRTHRVLHCGDFRASPLHVQHALLRPEIADPATGKARQQRIDACYLD 542
Query: 260 TTYCNPKYKFPSKEDVLNYVVRL----------------------TKNCLKK-------- 289
TTY +PKY FP +EDV+ L L K
Sbjct: 543 TTYLSPKYAFPGQEDVIQACAELCVELDGDANDTNGRAFGRPVNGKSGMLSKFVTAVTGS 602
Query: 290 QP----------KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSG 339
+P + LVV+G YSIGKE + L I++AL KIYA +++RV + ELS
Sbjct: 603 RPSPTQDSRPPGRLLVVIGTYSIGKERICLGIARALKSKIYATPAKQRVCACLEDAELSS 662
Query: 340 NLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD--- 396
L + +H+ + ++ ETL DYL + V+ FRPTGWTY G LD
Sbjct: 663 LLTDDPTEAQVHMQTLFEIRAETLADYLDSMKPHFTRVVGFRPTGWTYRPPAGRMLDNPP 722
Query: 397 ---------LIRPLS-------RGNI---TIYGVPYSEHSSFTELREF 425
P S RG+ +GVPYSEHSSF EL F
Sbjct: 723 VSVVLNSAHWKTPFSAKDLVPQRGSTRESACFGVPYSEHSSFRELSMF 770
>gi|169849883|ref|XP_001831640.1| DNA cross-link repair protein pso2/snm1 [Coprinopsis cinerea
okayama7#130]
gi|116507278|gb|EAU90173.1| DNA cross-link repair protein pso2/snm1 [Coprinopsis cinerea
okayama7#130]
Length = 738
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 219/456 (48%), Gaps = 81/456 (17%)
Query: 36 DDDDEEEEEKEESFADDFYRCGTDWSCLLQTERKLKQANLFDMWGLKSNSESEANCLFSP 95
DDD +EEE E DD SC T ++N F + + S E+EA S
Sbjct: 248 DDDCLKEEENEVLRIDDP-------SCSSSTRNLASRSNAFSVL-MSSFKENEAWKEASA 299
Query: 96 PMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYD 155
K + + G S R PFYK + G P VDAF+YG I G +AYFLTH H D
Sbjct: 300 AEAKTRPAKGDSGR--------RKAPFYKVLQGMPIAVDAFKYGKIPGVTAYFLTHAHSD 351
Query: 156 HYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEAN 212
HY L W HGPIYCS TA L+ L V+ ++ PL ++T VI GV VTL+EAN
Sbjct: 352 HYTNLSSSWKHGPIYCSEGTANLIVHMLSVDRKWVKPLPMDTPTVIPDTQGVIVTLIEAN 411
Query: 213 HCPGAALIHFR----LQDGQC--------------YLHTGDFRASRLMQSYPLLVNHRVN 254
HCPG+ L F + G YLH GDFRAS +P + ++
Sbjct: 412 HCPGSCLFLFEGRQTVNAGDTTFKSAYVGSPRTFRYLHCGDFRASPQHVLHPAVKGKVID 471
Query: 255 VLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK---------------------- 292
+YLDTTY +PKY FP + V++ L K +
Sbjct: 472 HVYLDTTYLDPKYTFPPQPLVVSACANLAKKLANGESTRQASGMFSSWLTTSKGKGKEVD 531
Query: 293 --TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
TL V+G YSIGKE + A++KA+G KIY + +L+ PEL L + + ++
Sbjct: 532 KPTLFVIGTYSIGKERIVKAVAKAVGSKIYCEKRKAGLLRCQADPELHAMLTSDPAEAVV 591
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD------LIRPL--- 401
H+LP+ + + +K+YL+ +G++Y+ V+ FRPTGWTY + G L R +
Sbjct: 592 HLLPLGMISSDKMKEYLERFGDKYSKVVGFRPTGWTYVQPSGTDQQPSVNTILTRTVQKP 651
Query: 402 -----------SRGNITIYGVPYSEHSSFTELREFV 426
S I +Y VPYSEHSSF EL F
Sbjct: 652 FTYEDLKPNGKSTSTILMYPVPYSEHSSFYELTCFA 687
>gi|358374994|dbj|GAA91581.1| DNA repair protein Pso2/Snm1 [Aspergillus kawachii IFO 4308]
Length = 836
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 199/408 (48%), Gaps = 84/408 (20%)
Query: 102 ASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG 161
A+ A+ K+ R+CPFYK IPG VDAFRYG+++GC+AYFL+HFH DHY GL
Sbjct: 381 AAAANEVASRGKQAYQRTCPFYKIIPGFSLCVDAFRYGAVEGCNAYFLSHFHSDHYVGLT 440
Query: 162 KRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAA 218
W HGPIYCS TA LV L V+ ++ PLE + I G +VTL+EANHCPG+A
Sbjct: 441 GSWRHGPIYCSRPTANLVCQQLKVDRKWLVPLEFEQKTEIPGTGGAQVTLIEANHCPGSA 500
Query: 219 LIHFRL-------QDGQCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLD 259
+ F Q LH GDFRAS L + LL R++ YLD
Sbjct: 501 IFLFEKLMGSGPSQRTHRVLHCGDFRASPLHVQHALLRPEITDPATGKARQQRIDACYLD 560
Query: 260 TTYCNPKYKFPSKEDVL----NYVVRLTKNC----------------------------- 286
TTY +PKY FP +EDV+ + V L ++
Sbjct: 561 TTYLSPKYAFPGQEDVIEACADLCVELDQDANDTNGRAFGRPVNGKSGMLSKFVTAVTGS 620
Query: 287 -------LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSG 339
+ + LVV+G YSIGKE + L I++AL KIYA +++RV + ELS
Sbjct: 621 RPSPTQGSRPPGRLLVVIGTYSIGKERICLGIARALKSKIYATPAKQRVCACLEDAELSS 680
Query: 340 NLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD--- 396
L + +H+ + ++ ETL DYL + V+ FRPTGWTY G LD
Sbjct: 681 LLTDDPTEAQVHMQTLFEIRAETLADYLDSMKPHFTRVVGFRPTGWTYRPPAGRMLDNPP 740
Query: 397 ---------LIRPLS-------RGNI---TIYGVPYSEHSSFTELREF 425
P S RG+ +GVPYSEHSSF EL F
Sbjct: 741 VSVVLNSAHWKTPFSAKDLVPQRGSTRESACFGVPYSEHSSFRELSMF 788
>gi|168035028|ref|XP_001770013.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678734|gb|EDQ65189.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 530
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 198/335 (59%), Gaps = 5/335 (1%)
Query: 96 PMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYD 155
P + S + + I P + IPGT F VDAF++ + CS +FLTHFH D
Sbjct: 167 PWRNTNPRRAISAVRNSRAIGTSGIPTWMCIPGTSFRVDAFKH-TTGNCSNWFLTHFHTD 225
Query: 156 HYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCP 215
HY GL + + HG I+CS +TARL+ + + V I L LN +IDGV+VT ++ANHCP
Sbjct: 226 HYQGLTRGFRHGKIFCSSITARLISLRIGVPLDRIQALPLNETVLIDGVRVTFIDANHCP 285
Query: 216 GAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDV 275
G+ +I F +G+ LHTGDFR M S +L R+ L LDTTYC+P++ FP ++ V
Sbjct: 286 GSVMILFEPPNGEVVLHTGDFRYYSDMASNDVLRKCRITTLILDTTYCDPQHDFPKQDSV 345
Query: 276 LNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWP 335
+ +V+ + PKTL ++G Y+IGKE +FL + KAL +Y ++++R+L D
Sbjct: 346 IQFVIDAIQ-AEAFNPKTLFLIGTYTIGKEKLFLEVGKALQKYVYVGSAKQRLLDCMDLT 404
Query: 336 ELSGN-LCTQGNDTLLHVLPMSSL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGN 393
E L T+ ++ +HV+P+ S+ F+ + + Y +Y +++AF PTG ++ +
Sbjct: 405 EEDKRWLTTKDQESHIHVVPLWSVASFKRMGSISRHYHGRYDSIVAFSPTGCSFGKDKKR 464
Query: 394 -QLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
Q R +G+I Y VPYSEHSSFTEL+EFV+
Sbjct: 465 VQGRPGRRYQQGSIIRYEVPYSEHSSFTELKEFVR 499
>gi|169624035|ref|XP_001805424.1| hypothetical protein SNOG_15267 [Phaeosphaeria nodorum SN15]
gi|160705099|gb|EAT77492.2| hypothetical protein SNOG_15267 [Phaeosphaeria nodorum SN15]
Length = 936
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 203/397 (51%), Gaps = 84/397 (21%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG++KG AYFL+HFH DHY GL WSHGPIYCS
Sbjct: 492 KPAYQRTCPFYKIMPGFFIAVDAFRYGAVKGQKAYFLSHFHSDHYIGLTSTWSHGPIYCS 551
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+TA LVR L V+PS++ L+ + GV VT++ ANHCPG++L F +
Sbjct: 552 KVTANLVRQQLRVDPSWVVDLDFEARTEVPGTQGVFVTMISANHCPGSSLFLFEKETSNG 611
Query: 228 -----QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA + +PLL +++V YLDTTY NPKY FP
Sbjct: 612 KPSKLQRVLHCGDFRACQAHIEHPLLRPDVLDVVSGRNKQQKLDVCYLDTTYLNPKYAFP 671
Query: 271 SKEDVLNYVV-----------------------RLTKNCLK-----------KQPKT--- 293
+ V+ R + +K +QPK+
Sbjct: 672 PQLQVIQACADMCVSLNKGRADDADGWEQMKRERAGQGMVKFVRKDSNADNPEQPKSPER 731
Query: 294 ---LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
LVVVG YSIGKE + + I+KALG KI+A A+++R+ + + PEL+ L +
Sbjct: 732 GRLLVVVGTYSIGKERICVGIAKALGSKIFAPANKQRICAALEDPELNALLTKDPRAAQV 791
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS------------ETVGNQLDLI 398
H+ P+ ++ +TL DY++ Y + ++ + FRP+GW Y +TV + +
Sbjct: 792 HMTPLFEIRADTLDDYMRNYADTFSRCVGFRPSGWNYRPPNSRFTESPAVQTVLHSQNWK 851
Query: 399 RPLSRGNIT----------IYGVPYSEHSSFTELREF 425
S ++T +GVPYSEHSSF EL F
Sbjct: 852 SAFSMKDLTPQRGSTSRASCFGVPYSEHSSFRELTMF 888
>gi|328850728|gb|EGF99889.1| hypothetical protein MELLADRAFT_40002 [Melampsora larici-populina
98AG31]
Length = 471
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 195/353 (55%), Gaps = 27/353 (7%)
Query: 95 PPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHY 154
P K+K + S + +K V+ PFYK + GT VDAF+YG I +AYFL+H H
Sbjct: 69 PSSSKIKLPDKTSDSQQIKLAVN--VPFYKIMEGTTIAVDAFKYGKIPNITAYFLSHAHA 126
Query: 155 DHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHC 214
DHY L W HG +YCS TA L+ L V ++ PL+ N ++DGVKVT+L+ANHC
Sbjct: 127 DHYTRLSHTWDHGFVYCSQTTANLICHNLGVKKQWVKPLKDNEPTMVDGVKVTVLDANHC 186
Query: 215 PGAALIHFRLQDGQC----YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFP 270
PG++L F Q YLH GDFRAS +P L + ++++ YLDTTY NPKY FP
Sbjct: 187 PGSSLFLFEGVKPQGKPFRYLHCGDFRASPAQLRHPALKDKKIDICYLDTTYLNPKYCFP 246
Query: 271 SKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
++E V+N L K+ + LV++G Y+IGKE + I+K++G KIY + + + +
Sbjct: 247 AQEQVINACSDLVKS---RDESILVLIGTYTIGKERIVKQIAKSIGSKIYCDTRKSLIFK 303
Query: 331 SFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSE- 389
+ PEL + +HV + ++K E L++YL+ + + ++ RPTGWTY
Sbjct: 304 CIEDPELHELMTDDPFKAQVHVTNLFAIKNEMLEEYLRRFRGHFTHIIGLRPTGWTYKPD 363
Query: 390 --TVGNQLDLIRPLSRGNIT---------------IYGVPYSEHSSFTELREF 425
T L RP++ +T +GVPYSEHSSF EL F
Sbjct: 364 ALTSSAHPPLDRPITPVEVTQACLYPQRDSTERCQAFGVPYSEHSSFFELTCF 416
>gi|392565356|gb|EIW58533.1| DRMBL-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 486
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 198/391 (50%), Gaps = 84/391 (21%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P +VDAFRYG+I C+AYFLTH H DHY L W HGPIYCSP TA
Sbjct: 47 RKAPFYKVLQGMPISVDAFRYGAIPNCTAYFLTHAHSDHYTNLSANWKHGPIYCSPGTAN 106
Query: 178 LVRMCLLVNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFR----LQDGQC- 229
L+ L V+P ++HPL ++ VI GV+VTL+EANHCPG+ L F + G
Sbjct: 107 LIIHMLKVDPKWVHPLPMDVPTVISNTGGVEVTLIEANHCPGSCLFLFEGKQTVNGGDSA 166
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRA +P + ++ +YLDTTY +PKY FP + V+
Sbjct: 167 YKSPFVGSPRIFRYLHCGDFRACPKHILHPAVKGKHLDHVYLDTTYLDPKYCFPPQPLVI 226
Query: 277 NYVVRLTKNCLK-----------KQPKT----------------------------LVVV 297
+ L K ++ +P+T LVVV
Sbjct: 227 SACAELAKRLVQGRAVEDVDPGETKPRTVTGWFTRKDKGGDKGKEKDKAASAPTKVLVVV 286
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE + AI+KAL KIY +A + +L+ + PEL L T +H++P+
Sbjct: 287 GTYSIGKERIVKAIAKALDTKIYCDARKAAILRCEEDPELDALLTTDAYAAGVHLVPLGV 346
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL---------------- 401
+ + L+DY+ + +Y+ + FRPTGWT+++ G+ D + P+
Sbjct: 347 IASDRLQDYVDRWKGRYSRAIGFRPTGWTFTQPKGS--DTLPPISTVITRSQGLGFTHAN 404
Query: 402 ------SRGNITIYGVPYSEHSSFTELREFV 426
S + +YGVPYSEHSSF EL F
Sbjct: 405 LQPMRNSTSTLQVYGVPYSEHSSFFELTCFA 435
>gi|189204073|ref|XP_001938372.1| DNA cross-link repair protein pso2/snm1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985471|gb|EDU50959.1| DNA cross-link repair protein pso2/snm1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 895
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 203/397 (51%), Gaps = 84/397 (21%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG++KG +AYFL+HFH DHY GL W HGPIYCS
Sbjct: 449 KPAYQRTCPFYKIMPGFFIAVDAFRYGAVKGQNAYFLSHFHSDHYVGLTASWKHGPIYCS 508
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+T LVR L V+P ++ L+ + + +GV VT++ ANHCPG++L F + G
Sbjct: 509 KVTGNLVRQQLRVDPKWVIDLDFEEKTEVPGTEGVFVTMISANHCPGSSLFLFEKEIGKG 568
Query: 228 -----QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA + +PLL +++ YLDTTY NPKY FP
Sbjct: 569 KNPRLQRVLHCGDFRACQAHIEHPLLRPNVLDAVSGKNRQQKLDACYLDTTYLNPKYAFP 628
Query: 271 SKEDVL----NYVVRLTK---------NCLKK---------------------QPKT--- 293
++ V+ + V L+K +K+ +PK+
Sbjct: 629 PQQQVIQACADMCVSLSKVRTDESDGWEKMKRERAGQGMVKFVRKESDQDNPAEPKSPER 688
Query: 294 ---LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
LVVVG YSIGKE + I+KAL KIYA +++R+ ++ + PEL L T +
Sbjct: 689 GRLLVVVGTYSIGKERICTGIAKALNSKIYAPTNKQRICKALEDPELDALLTTDPRAAQV 748
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG------------------ 392
H+ P+ ++ +TL DYL+ Y + + ++ FRP+GW Y G
Sbjct: 749 HMTPLFEIRADTLDDYLREYADSFTRIVGFRPSGWNYRPPKGRFTESPQVQTVLHSDNWK 808
Query: 393 ---NQLDLIRPLSRGN-ITIYGVPYSEHSSFTELREF 425
+ DL G+ + +GVPYSEHSSF EL F
Sbjct: 809 STFSMKDLTPQAGSGSRASCFGVPYSEHSSFRELTMF 845
>gi|156063186|ref|XP_001597515.1| hypothetical protein SS1G_01709 [Sclerotinia sclerotiorum 1980]
gi|154697045|gb|EDN96783.1| hypothetical protein SS1G_01709 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1001
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 210/419 (50%), Gaps = 98/419 (23%)
Query: 99 KLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYG 158
K K+S GK HL R+CPFYK +PG VDAFRYG++ GC+AYFL+HFH DHY
Sbjct: 537 KEKSSRGK--PAHL-----RTCPFYKIMPGLFICVDAFRYGAVTGCNAYFLSHFHSDHYI 589
Query: 159 GLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCP 215
GL WS+GPIYCS +T LV+ L V+P ++ +E + + GV VT++ ANHCP
Sbjct: 590 GLTSSWSYGPIYCSKVTGNLVKQQLKVDPKWVVSIEFEDKIEVPNTQGVSVTMIPANHCP 649
Query: 216 GAALIHF-----RLQDG--QCYLHTGDFRASRLMQSYPLLV------------NHRVNVL 256
G++L F R Q+ Q LH GDFRA ++PLL+ +++V
Sbjct: 650 GSSLFLFEKTTTRGQNPKVQRILHCGDFRACPAHIAHPLLMPNVVDTLSGKTKQQKIDVC 709
Query: 257 YLDTTYCNPKYKFPSKEDVL----NYVVRLTK---------------------------- 284
YLDTTY NPKY FPS++DV+ + V L+K
Sbjct: 710 YLDTTYLNPKYSFPSQDDVVKACADMCVSLSKENAEESDAWETVKRERAGVKMTEFIKSV 769
Query: 285 ---------------NCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVL 329
N K + + LVV G YSIGKE + L I++AL KIYA + R+
Sbjct: 770 PTETGDSNTLETSSENKKKARGRLLVVCGTYSIGKERIVLGIARALDCKIYAVPGKMRIC 829
Query: 330 QSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS- 388
+ + PEL+ L + + +H+ + L+ ETL+DYL Y + V+ FRP+GW+Y
Sbjct: 830 AALEDPELTSRLTSDPREAQIHMQMLMELRPETLQDYLTGYKPHFTRVVGFRPSGWSYKP 889
Query: 389 -----------ETVGNQLDLIRPLSRGNI----------TIYGVPYSEHSSFTELREFV 426
T+ N + G + +GVPYSEHSSF EL FV
Sbjct: 890 PNSRFVDSPPIHTILNASNWRSEYDMGELIPQRGSTKEAQCFGVPYSEHSSFRELTMFV 948
>gi|195391946|ref|XP_002054620.1| GJ24554 [Drosophila virilis]
gi|194152706|gb|EDW68140.1| GJ24554 [Drosophila virilis]
Length = 654
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 185/313 (59%), Gaps = 13/313 (4%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CP YK + T F VD F++G I + YFL+H+H DHY GL ++++H P+Y SP+TAR
Sbjct: 234 KRCPPYKIVEDTTFVVDGFQFGDIPNATHYFLSHYHGDHYVGLTRKFAH-PLYMSPITAR 292
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LVR + ++ Y+H + ++ ++ ++VT ++ANHCPGA ++ F+ G+C LHTGDFR
Sbjct: 293 LVRTFIPIDSQYLHEIAVDQSITLNDIEVTAIDANHCPGAIMLIFKFSTGKCILHTGDFR 352
Query: 238 ASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP--KTL 294
AS M+S P+ N +++LYLDTTY + Y F + D + V L + +K + L
Sbjct: 353 ASFEMESLPIFWNQPNIDLLYLDTTYLSQNYDFCHQSDSIYRVCSLVRQFHEKHASKRIL 412
Query: 295 VVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLP 354
V G+Y IGKE V+LA+ + ++++ +RR+ + DWPEL +LC + LHV+
Sbjct: 413 HVCGSYLIGKEKVWLALVEEFRLRVWTEPNRRKAIDCLDWPELKHSLCDDPFEANLHVIN 472
Query: 355 MSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYS 414
M + + L Y K + Y +L RP+GW + +P I++ GV YS
Sbjct: 473 MGKISYPQLDQYFKQFEGHYDMLLGIRPSGWEKNS---------KPSYGKRISVIGVEYS 523
Query: 415 EHSSFTELREFVQ 427
EHSS+ EL FV+
Sbjct: 524 EHSSYKELERFVR 536
>gi|393221757|gb|EJD07241.1| DRMBL-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 485
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/393 (36%), Positives = 193/393 (49%), Gaps = 84/393 (21%)
Query: 114 KIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSP 173
K R PFYK + G P VDAFRYG+I G AYFLTH H DHY L W GPIYCS
Sbjct: 43 KTERRKAPFYKILTGMPIAVDAFRYGTIPGVEAYFLTHAHSDHYTNLSSNWKSGPIYCSE 102
Query: 174 LTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC- 229
TA L+ L V+ ++HPL +NT + GVKVTLL+ANHCPG+ L F + Q
Sbjct: 103 TTANLIAHMLSVDRKWLHPLPMNTPVEVPNTGGVKVTLLDANHCPGSCL--FLFEGSQTT 160
Query: 230 -------------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFP 270
YLH GDFRAS +P + R++ +YLDTTY NP+Y FP
Sbjct: 161 NAGDSTYKSPFVGTSRTFRYLHCGDFRASPQHVLHPSVKGKRLDTVYLDTTYLNPRYCFP 220
Query: 271 SKEDVLNYVVRLTKNCLKKQP-----------------------------------KTLV 295
+ V++ L + + +P + L+
Sbjct: 221 PQPLVVSACAELARRIVNGEPLDSDNGKGSSNGKASIQEWMKTGEGKGKQRAQKDGEVLI 280
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
VVG YSIGKE V AI+KAL K+Y ++ + +L D PEL L + + +HV+P+
Sbjct: 281 VVGTYSIGKERVVKAIAKALNTKVYCDSRKVAILHCQDDPELHALLTDKPLEAGVHVVPL 340
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSR------------ 403
+ + K+Y+ + +++ +AFRPTGWTYS VG+ D + P+SR
Sbjct: 341 GQVASDRFKEYMDRWKGRWSRAVAFRPTGWTYSPPVGS--DPMPPISRVVAAAQARDFTY 398
Query: 404 ----------GNITIYGVPYSEHSSFTELREFV 426
YGVPYSEHSSF EL F
Sbjct: 399 AHLRPARNSTAQFMQYGVPYSEHSSFAELACFA 431
>gi|380496304|emb|CCF31810.1| DNA repair metallo-beta-lactamase [Colletotrichum higginsianum]
Length = 858
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/407 (35%), Positives = 199/407 (48%), Gaps = 93/407 (22%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG++KGC+AYFL+HFH DHY GL W+HGPIYCS
Sbjct: 404 KPAYQRTCPFYKIMPGFYICVDAFRYGAVKGCNAYFLSHFHSDHYIGLTANWTHGPIYCS 463
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+T LV+M L V ++ PLE + + +GV VT++ ANHCPG++L F G
Sbjct: 464 KVTGDLVKMQLRVAAHWVRPLEFDETVKVPGTEGVTVTMISANHCPGSSLFLFEKSIGKG 523
Query: 228 -----QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA +PLL +++V YLDTTY NP+Y FP
Sbjct: 524 NSAKKQRILHCGDFRACPAQVGHPLLKPEVQDSISGKTKQQKIDVCYLDTTYLNPRYSFP 583
Query: 271 SKEDVLNYVVRLTKNCLKKQ------------------------------------PKT- 293
+ DV+ + K+ Q PKT
Sbjct: 584 PQNDVIKACADMCKSLAPDQSLMDDTWDKINREAGTGTVSKFFTKVNADGEVSESNPKTA 643
Query: 294 -----LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
LV+ G YSIGKE + AI++ALG KI+A+ S+ R+ PEL+ + +
Sbjct: 644 PKERLLVICGTYSIGKERICKAIAQALGSKIFASKSKIRICSKLGDPELTALMTDNPYEA 703
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-------SETVGNQLDLIRPL 401
+H+ + ++ ETL++YL Y ++ ++ FRP+GW Y S T Q +I
Sbjct: 704 QVHMQMLMEIRAETLQEYLNSYKPHFSRIVGFRPSGWNYRPQGASKSVTASTQPSIIPTT 763
Query: 402 -------------------SRGNIT---IYGVPYSEHSSFTELREFV 426
RG+ +GVPYSEHSSF EL F+
Sbjct: 764 QIFQAQAWRSRFGAKDFVPQRGSTKEAMCFGVPYSEHSSFRELAMFI 810
>gi|429849697|gb|ELA25052.1| DNA repair protein pso2 [Colletotrichum gloeosporioides Nara gc5]
Length = 828
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 198/407 (48%), Gaps = 93/407 (22%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG++KGC+AYFL+HFH DHY GL W+HGPIYCS
Sbjct: 354 KPAYQRTCPFYKIMPGFYICVDAFRYGAVKGCNAYFLSHFHSDHYIGLTANWTHGPIYCS 413
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+T LV+M L V ++ PLE N + +GV VT++ ANHCPG++L F G
Sbjct: 414 KVTGDLVKMQLRVAAHWVRPLEFNETVDVPGTEGVTVTMISANHCPGSSLFLFEKTMGKG 473
Query: 228 -----QCYLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA ++PLL +++V YLDTTY NP+Y FP
Sbjct: 474 PSARKQRILHCGDFRACPAQVAHPLLKPEVQDSISGKTRQQKIDVCYLDTTYLNPRYSFP 533
Query: 271 SKEDVLNYVVRL----------------------------------------TKNCLKKQ 290
+ DV+ L TK K
Sbjct: 534 PQNDVIRACAELCTSLAPEQNSEDNAWDRVNREAGTDTVSKFFSKTKIDGETTKAKPKNA 593
Query: 291 PKT--LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
PK LV+ G YSIGKE + AI++ALG KI+A+ S+ R+ PEL+ + +
Sbjct: 594 PKERLLVICGTYSIGKERICKAIAQALGSKIFASKSKIRICSKLGDPELTALMTDNPLEA 653
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-------SETVGNQLDLIRP- 400
+H+ + ++ ETL+DYL Y ++ ++ FRP+GW Y S + Q I
Sbjct: 654 QVHMQMLMEIRAETLQDYLNSYKPHFSRIVGFRPSGWNYRPQGAGKSVSANTQPGTIPTT 713
Query: 401 ------------------LSRGNIT---IYGVPYSEHSSFTELREFV 426
RG+ +GVPYSEHSSF EL F+
Sbjct: 714 QILQGKAWRSRFGAKDFVAQRGSTKEAMCFGVPYSEHSSFRELAMFL 760
>gi|194898775|ref|XP_001978943.1| GG12882 [Drosophila erecta]
gi|190650646|gb|EDV47901.1| GG12882 [Drosophila erecta]
Length = 637
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 193/339 (56%), Gaps = 17/339 (5%)
Query: 92 LFSPPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTH 151
LF AS K A +K V S ++ G + +G I G + YFLTH
Sbjct: 124 LFEESTTTFSASTDKRDAKPPEKRVQPS----RRAKGKENAITESDFGDIDGVTHYFLTH 179
Query: 152 FHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEA 211
FH DHY GL K++ + P+Y SP TARLV+ + V+ +YIH +E++ V++GV+VT LEA
Sbjct: 180 FHADHYIGLTKKFCY-PLYVSPTTARLVQTFIKVDTTYIHEIEVDQTLVVNGVQVTALEA 238
Query: 212 NHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFP 270
NHCPGA + F+L G+C LHTGDFR S M+S P+ NH +++LYLDTTY N Y F
Sbjct: 239 NHCPGALMFFFKLSSGECILHTGDFRGSADMESLPIFWNHANIDLLYLDTTYMNKNYDFC 298
Query: 271 SKEDVLNYVVRLTKNCLKKQP--KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRV 328
+ + ++ V L + ++K + L+V G+Y IGKE ++LA++K +K++ ++R
Sbjct: 299 HQSESVDRAVYLVRAFIEKNASKRILIVCGSYVIGKEKIWLALAKEFTMKVWTESNRSTA 358
Query: 329 LQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS 388
++ WP+L L + LHV+ M + + +L DY + +QY +L RP+GW +
Sbjct: 359 VRCLKWPDLDSVLTEDPREANLHVVTMGKISYPSLVDYFTLFEDQYDMLLGIRPSGWEKN 418
Query: 389 ETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+P I+ G+ YSEHSS+ EL FV+
Sbjct: 419 S---------KPSYGKRISTIGIEYSEHSSYKELERFVR 448
>gi|406865971|gb|EKD19011.1| DNA cross-link repair protein pso2/snm1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1022
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 204/411 (49%), Gaps = 93/411 (22%)
Query: 108 TATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG 167
T + K +R+CPFYK +PG VDAFRYG+++GC+AYFL+HFH DHY GL W HG
Sbjct: 559 TKSRGKPAYERTCPFYKIMPGFFICVDAFRYGAVQGCNAYFLSHFHSDHYIGLTSTWCHG 618
Query: 168 PIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRL 224
PIYCS +TA LV+ L V+P Y+ L+ I GV +T++ ANHCPG++L F
Sbjct: 619 PIYCSKVTANLVKQQLRVDPKYVVALDFEDRFEIPGTQGVAITMIPANHCPGSSLFLFEK 678
Query: 225 QDG-------QCYLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNP 265
G Q LH GDFRA ++PLL+ +++V YLDTTY NP
Sbjct: 679 VIGKGANPKTQRILHCGDFRACPAHLAHPLLMPDVVDSITGKTKQQKIDVCYLDTTYLNP 738
Query: 266 KYKFPSKEDVL--------------------------------------NYVVRLTKNCL 287
KY FPS+E+V+ N ++ + L
Sbjct: 739 KYSFPSQEEVIKACADMCVSLKKERAEETDAWEVVKRERAGAGMTKFVKNSTIKAEDDSL 798
Query: 288 ---------KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELS 338
K + + LVV G YSIGKE + + I++AL KI+A + ++ ++ + EL
Sbjct: 799 AMSLSSKDAKARGRLLVVCGTYSIGKERICMGIARALDCKIWAPPGKMKICKALEDEELM 858
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGN----- 393
+ T + +H+ + ++ ETL+DYL Y ++ ++ FRP+GW Y V
Sbjct: 859 SRMTTDPKEAQIHMQMLMEIRPETLQDYLNTYKPHFSRIVGFRPSGWNYRPPVSRFIASP 918
Query: 394 ---------------QLDLIRPLSRGNI---TIYGVPYSEHSSFTELREFV 426
+ + P RG+ + +GVPYSEHSSF EL FV
Sbjct: 919 SISTILHSPSWHSSFSMSELVP-QRGSTREASCFGVPYSEHSSFRELTMFV 968
>gi|310800348|gb|EFQ35241.1| DNA repair metallo-beta-lactamase [Glomerella graminicola M1.001]
Length = 879
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 198/407 (48%), Gaps = 93/407 (22%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG++KGC+AYFL+HFH DHY GL W+HGPIYCS
Sbjct: 405 KPAYQRTCPFYKIMPGFYICVDAFRYGAVKGCNAYFLSHFHSDHYIGLTANWTHGPIYCS 464
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+T LV+M L V ++ PLE + + DGV VT++ ANHCPG++L F G
Sbjct: 465 KVTGDLVKMQLRVAAHWVRPLEFDETVDVPGTDGVTVTMIPANHCPGSSLFLFEKTMGKG 524
Query: 228 -----QCYLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA ++PLL +++V YLDTTY NP+Y FP
Sbjct: 525 PSAKKQRILHCGDFRACPAQVAHPLLKPEVQDSISGKVREQKIDVCYLDTTYLNPRYSFP 584
Query: 271 SKEDVLNYVVRLTKNCLKKQP--------------------------------------- 291
+ DV+ + K+ QP
Sbjct: 585 PQNDVIKACADMCKSLAPDQPPGYNSWDRISREAGTETVSKFFTKTNVEGEASNPKPKNV 644
Query: 292 ---KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
+ LV+ G YSIGKE + AI++ALG KI+A+ S+ R+ PEL+ + +
Sbjct: 645 PRERLLVICGTYSIGKERICKAIAQALGSKIFASKSKIRICSKLGDPELTALMTDNPYEA 704
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-------SETVGNQLDLIRP- 400
+H+ + ++ ETL++YL Y ++ ++ FRP+GW Y + T Q I
Sbjct: 705 QVHMQMLMEIRAETLQEYLNSYKPHFSRIVGFRPSGWNYRPQGASKAVTANTQPGTIPTT 764
Query: 401 ------------------LSRGNIT---IYGVPYSEHSSFTELREFV 426
RG+ +GVPYSEHSSF EL F+
Sbjct: 765 QIFQGKAWRSRFGAKDFVAQRGSTKEAMCFGVPYSEHSSFRELAMFL 811
>gi|170087900|ref|XP_001875173.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650373|gb|EDR14614.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 434
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 193/352 (54%), Gaps = 44/352 (12%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I G +AYFLTH H DHY L W GPIYCS TA
Sbjct: 31 RKAPFYKVMQGMPIAVDAFRYGTIPGVTAYFLTHAHSDHYTNLSSTWQSGPIYCSQGTAN 90
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR-LQDGQC---- 229
L+ L V+ ++HPL ++ +I +GV+VTL+EANHCPG+ L F LQ
Sbjct: 91 LIIHMLSVDRKWVHPLPMDVPTIIPNTNGVQVTLIEANHCPGSCLFFFEGLQTSPFIGSS 150
Query: 230 ----YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKN 285
YLH GDFRAS +P + ++ +YLDTTY +P+Y FP + V++ +
Sbjct: 151 KVFRYLHCGDFRASPRHVVHPAVKGKPIDHVYLDTTYLDPQYTFPPQPLVISACAEFARK 210
Query: 286 CLKKQP---KTLVVVGAYSIGKESV---------FLAISKALGVKIYANASRRRVLQSFD 333
+K + LVVVG YSIGKE + +AI+ AL KIY +A + +L+ +
Sbjct: 211 MVKHKEVDIHPLVVVGTYSIGKERIPAFLLTVPLHVAIAHALKTKIYCDARKAAILRCQE 270
Query: 334 WPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG- 392
PEL+ L ++ D ++H++P+ + + LK YL + Y V+ FRPTGWT+S+ G
Sbjct: 271 DPELNALLTSKPMDAIVHLVPLGMITSDGLKTYLDRFKGSYTKVIGFRPTGWTFSQAAGA 330
Query: 393 NQLDLI-----------------RPLSR--GNITIYGVPYSEHSSFTELREF 425
+QL + RP + + I VPYSEHSSF EL F
Sbjct: 331 DQLPSVSCTLARTQQKNFTCADLRPSGKPTSTLQIIPVPYSEHSSFYELTCF 382
>gi|384246117|gb|EIE19608.1| DRMBL-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 319
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 133/311 (42%), Positives = 186/311 (59%), Gaps = 18/311 (5%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
+P T F VD FR+ S + C Y+L+H+H DH GL +S G IYCS +TA L+ + +
Sbjct: 1 VPNTRFMVDGFRFQSSR-CKHYWLSHYHSDHTTGLTTSFSSGTIYCSAVTANLLVKDMHI 59
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ-------DGQCYLHTGDFRA 238
NPS I PL LN ++DG+ VTL++ANHCPGA L F+ Q LHTGD R
Sbjct: 60 NPSCIQPLPLNIPLLVDGINVTLIDANHCPGAVLFLFKTPPPPGSEFSEQVILHTGDMRW 119
Query: 239 SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
M +P L N R+++L+LDTTY +PK+ FP +ED + +VR+ K K +P TL ++G
Sbjct: 120 HPRMGRHPALKNQRIDMLFLDTTYASPKHVFPCQEDAIADIVRVMKQEAKARPGTLFIMG 179
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQ-GNDTLLHVLPMSS 357
+Y IGKE +L +KALG K++ NA + RVL+ PE L T+ +HV M
Sbjct: 180 SYRIGKERAYLGAAKALGWKVHVNADKLRVLRLLGLPENDMALLTRDAAAARIHVSFMGK 239
Query: 358 -LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEH 416
L + L D ++ + V+AFRPTGW++ ++ L R G++ IYGVPYSEH
Sbjct: 240 LLTPDALTDRIR--AGPWTHVVAFRPTGWSFQKS---GLSCRR---EGDVAIYGVPYSEH 291
Query: 417 SSFTELREFVQ 427
SSF ELR+ V+
Sbjct: 292 SSFAELRDCVK 302
>gi|195062921|ref|XP_001996278.1| GH22402 [Drosophila grimshawi]
gi|193899773|gb|EDV98639.1| GH22402 [Drosophila grimshawi]
Length = 623
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 185/313 (59%), Gaps = 13/313 (4%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CP YK + T F VD F++G+I + YFL+H+H DHY GL ++++H P+Y SP+TAR
Sbjct: 241 KRCPSYKIVEDTTFVVDGFQFGNIPNATHYFLSHYHADHYVGLTRKFAH-PLYMSPITAR 299
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV + ++ ++H ++++ V+ ++VT ++ANHCPGA ++ F+ G+C LHTGDFR
Sbjct: 300 LVEKFIPIDSQFVHEIDVDKSVVVKDIEVTAIDANHCPGAIMLLFKFSTGKCILHTGDFR 359
Query: 238 ASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP--KTL 294
AS M+S P+ N +++LYLDTTY Y F + D + L + +K + L
Sbjct: 360 ASFEMESLPIFWNEPNIDLLYLDTTYLAKNYDFCHQSDSIYSACSLVQKFHEKNASKRIL 419
Query: 295 VVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLP 354
V G+Y IGKE V+LA+++ G++++ RR+ + +WPEL L D LHV+
Sbjct: 420 HVCGSYLIGKEKVWLALAEEFGLRVWTEPHRRKAIDCLNWPELQLVLSDDPFDANLHVIG 479
Query: 355 MSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYS 414
M + + L Y K + +Q+ +L RP+GW + +P I++ GV YS
Sbjct: 480 MGKISYPQLDQYFKQFESQFDMLLGIRPSGWEKNS---------KPSYGKRISVIGVEYS 530
Query: 415 EHSSFTELREFVQ 427
EHSS+ EL FV+
Sbjct: 531 EHSSYKELERFVR 543
>gi|400602726|gb|EJP70328.1| DNA repair metallo-beta-lactamase [Beauveria bassiana ARSEF 2860]
Length = 842
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 219/447 (48%), Gaps = 92/447 (20%)
Query: 72 QANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKST--ATHLKKIVDRSCPFYKKIPGT 129
QAN F + G S+S + L S + S + A+ K R+CPFYK +PG
Sbjct: 326 QANPFYLTGQTPGSKSAFSQLMSSNAEDTAWSTAAAAENASRGKPAYTRTCPFYKIMPGF 385
Query: 130 PFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSY 189
VDAFRYG+++GC AYFL+HFH DHY GL W+HGPIYCS +T LVR L +
Sbjct: 386 SICVDAFRYGAVEGCKAYFLSHFHSDHYIGLTATWTHGPIYCSKVTGSLVRNQLRTAAKW 445
Query: 190 IHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQCY-------LHTGDFRAS 239
+ LE + E+ + DG KVT++ ANHCPG++L F G+ + LH GDFRA
Sbjct: 446 VVELEFDKEYDVPGTDGAKVTMISANHCPGSSLFVFEKVVGERHNKSLKRILHCGDFRAC 505
Query: 240 RLMQSYPL------------LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTK--- 284
+PL L ++++ YLDTTY NP+Y FP + DV+ L
Sbjct: 506 PDHVQHPLLRPDVADSVSGKLRRQKIDICYLDTTYLNPRYSFPPQNDVIQACADLVAKIS 565
Query: 285 ---NCL----------------------------KKQPK------TLVVVGAYSIGKESV 307
NC K +PK L++ G YSIGKE +
Sbjct: 566 PDPNCKDDVWDSAKKEAGKTVSKYFQNPTAPVLEKPEPKKKLGQRVLIICGTYSIGKERI 625
Query: 308 FLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYL 367
+AI+KAL KI+A+ S+ ++ + PEL+ L + + +H+ + ++ ETL++YL
Sbjct: 626 CVAIAKALRTKIFASPSKIKICKQLGDPELTALLTSDPIEAQVHMQMLMEIRAETLQEYL 685
Query: 368 KPYGNQYAAVLAFRPTGWTY----SETVG-NQLDLIRPL--------------------S 402
Y ++ ++ FRP+GW + S++VG N P
Sbjct: 686 NSYKPHFSRIVGFRPSGWNFRPVNSKSVGANTAPSTIPTQQLLHGKGWRTRFGAADFVPQ 745
Query: 403 RGNIT---IYGVPYSEHSSFTELREFV 426
RG+ +GVPYSEHSSF EL F+
Sbjct: 746 RGSTKEAMCFGVPYSEHSSFRELALFL 772
>gi|302687346|ref|XP_003033353.1| hypothetical protein SCHCODRAFT_53758 [Schizophyllum commune H4-8]
gi|300107047|gb|EFI98450.1| hypothetical protein SCHCODRAFT_53758, partial [Schizophyllum
commune H4-8]
Length = 463
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 190/373 (50%), Gaps = 64/373 (17%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYGSI G AYFLTH H DHY L W GPIYCS +T
Sbjct: 40 RKAPFYKVLQGMPIAVDAFRYGSIPGVKAYFLTHAHSDHYTNLSSSWDSGPIYCSEVTCN 99
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR----------- 223
L+ L V+ ++HPL L+T I GVKVTL+EANHCPG++L F
Sbjct: 100 LIAHMLRVDKKWLHPLPLDTPTEIPDTGGVKVTLIEANHCPGSSLFFFEGRQTVNAGDSA 159
Query: 224 -----LQDGQC--YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
+ G+ YLH GDFRAS +P + +++ +YLDTTY +PKY FP + V+
Sbjct: 160 FKSPFVGTGRVFRYLHCGDFRASPRHVEHPCVKGKKIDHVYLDTTYLDPKYTFPPQPQVI 219
Query: 277 NYVVRLTKNCLKKQP-----------------------KTLVVVGAYSIGKESVFLAISK 313
+ L + + P + LV+VG YSIGKE + AI+
Sbjct: 220 DACAELARRIVNGLPTGTETTMIDGWVSTKEKAASSSDRILVLVGTYSIGKERIAKAIAH 279
Query: 314 ALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQ 373
AL KIY + + +L+ EL L + + +H++P+ + + LK Y + Y +
Sbjct: 280 ALNSKIYCDNRKAAILRCEQDKELDALLTSNPREAAVHLVPLGVITSDKLKPYYERYKDT 339
Query: 374 YAAVLAFRPTGWTYSETVGNQLDLIRP--LSRGN------------------ITIYGVPY 413
++ + FRPTGWT+++ G L P ++RG + +YGVPY
Sbjct: 340 FSRAVGFRPTGWTFTQPAGTDLSPPIPTIIARGQSRTYAYTDLRPTRNSTPLLQLYGVPY 399
Query: 414 SEHSSFTELREFV 426
SEHSSF EL F
Sbjct: 400 SEHSSFFELTCFA 412
>gi|452821333|gb|EME28365.1| DNA ligase [Galdieria sulphuraria]
Length = 574
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 190/329 (57%), Gaps = 23/329 (6%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
PF K++PGT FTVD+F+ C +FL+HFH DH GL R+ G I+CS +TA L+R
Sbjct: 220 PFSKRVPGTSFTVDSFKMAGQGDCRQFFLSHFHSDHTMGLTSRFQAGVIFCSRITASLIR 279
Query: 181 MCLLVNPSYIHPLELNTE-HVID---------GVKVTLLEANHCPGAAL-IHFRLQDGQC 229
L V YI LELN +V D G VT+L+ANHCPG+ + + F Q +
Sbjct: 280 SQLGVKDEYICVLELNQSCYVQDEGKSTRGTMGATVTVLDANHCPGSVMFLFFVWQTKEL 339
Query: 230 YLHTGDFRAS-RLMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL 287
LHTGDFR S L P + ++ L+LDTTYCNP+Y FPS+++ + V+ K
Sbjct: 340 ILHTGDFRYSIELHSQIPQMFGKSCLDYLFLDTTYCNPRYDFPSQQEAVEAVLEAVK-AE 398
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGN-LCTQGN 346
+ L + G Y IGKE VFL +++ L K+Y + + R+L PE N L T+ +
Sbjct: 399 SFHSRVLFLFGTYQIGKEKVFLHVAERLNEKVYVDKRKYRILNHLSLPENVQNLLTTEPS 458
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS-----ETVGNQLD--LIR 399
+ LHV+ M ++ F +++ K Y +Y +AFRPTGW+Y+ + GN L R
Sbjct: 459 ASRLHVVDMRTVSFGGMREIAKNYATRYNTFVAFRPTGWSYTGKKMLRSYGNLKPGILTR 518
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFVQV 428
L + N +YGVPYSEHSSF+ELREFV +
Sbjct: 519 QL-KQNCVLYGVPYSEHSSFSELREFVSI 546
>gi|358378071|gb|EHK15754.1| hypothetical protein TRIVIDRAFT_56212 [Trichoderma virens Gv29-8]
Length = 800
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 218/457 (47%), Gaps = 111/457 (24%)
Query: 72 QANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTA----------THLKKIVDRSCP 121
Q N F++ N+E++ FS KL + N + +A + + +R+CP
Sbjct: 283 QTNPFEI-----NTETKTKSAFS----KLMSGNAEDSAWATAAAAETASRGRPAYERTCP 333
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRM 181
FYK +PG VDAFRYG+++GC AYFL+HFH DHY GL W HGPIYCS +T LV+
Sbjct: 334 FYKIMPGFAICVDAFRYGAVEGCQAYFLSHFHSDHYIGLTANWRHGPIYCSKVTGSLVKQ 393
Query: 182 CLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-------QCYL 231
L ++ LE + I DG VT++ ANHCPG++L F+ G + L
Sbjct: 394 QLRTAAKWVVELEFEKPYDIPGTDGASVTMMPANHCPGSSLFLFQKSFGSGPNKRTKRIL 453
Query: 232 HTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYV 279
H GDFRA +PLL R+++ YLDTTY NP+Y FP + DV+
Sbjct: 454 HCGDFRACPEHVRHPLLRPDVIDSISGKSRQQRIDICYLDTTYLNPRYSFPPQGDVIQAC 513
Query: 280 VRL------------------------------------------TKNCLKKQPKTLVVV 297
L +K+ + + + LV+
Sbjct: 514 AELCGSMSADPNCSDDVWQRSEKSAETGTMSKYFQSDKPSEGDAQSKSTSRPKQRLLVIC 573
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE + +AI+KALG KI+A+ ++ ++ + D PEL+ L + + +H+ +
Sbjct: 574 GTYSIGKERICVAIAKALGSKIFASPAKIKICKQLDDPELTSLLTSDPVEAQVHMQMLME 633
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS--------------- 402
++ ETL++YL Y ++ ++ FRP+GW + G + P S
Sbjct: 634 IRAETLQEYLDSYRPHFSRIVGFRPSGWNFRPGNGKAVGANTPPSSISTQQLLHGKGWRT 693
Query: 403 ----------RGNIT---IYGVPYSEHSSFTELREFV 426
RG+ +GVPYSEHSSF EL FV
Sbjct: 694 RFGVKDLVAQRGSTKEAMCFGVPYSEHSSFRELAMFV 730
>gi|346324358|gb|EGX93955.1| DNA cross-link repair protein [Cordyceps militaris CM01]
Length = 845
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 223/457 (48%), Gaps = 112/457 (24%)
Query: 72 QANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTATHLKKIVD----------RSCP 121
QAN D+ + +S A FS +L +SN + TA + R+CP
Sbjct: 329 QANPIDL----AEQQSGAKSAFS----QLMSSNAEDTAWSTAAAAENASRGRPAYMRTCP 380
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRM 181
FYK +PG VDAFRYG+++GC AYFL+HFH DHY GL RW HGPIYCS +T LVR
Sbjct: 381 FYKIMPGFSICVDAFRYGAVEGCKAYFLSHFHSDHYIGLTARWVHGPIYCSKVTGSLVRN 440
Query: 182 CLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQCY-------L 231
L ++ LE + E+ + DG KVT++ ANHCPG++L F G+ + L
Sbjct: 441 QLRTAAKWVVELEFDKEYDVPGTDGAKVTMIPANHCPGSSLFVFEKTVGERHNKSLKRIL 500
Query: 232 HTGDFRASRLMQSYPL------------LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYV 279
H GDFRA +PL L ++++ YLDTTY NP+Y FP + DV+
Sbjct: 501 HCGDFRACPDHVQHPLLRPDTADAISGKLKRQKIDICYLDTTYLNPRYSFPPQNDVIQAC 560
Query: 280 VRLTK------NCL----------------------------KKQPK------TLVVVGA 299
L NC K +PK L++ G
Sbjct: 561 ADLVAQIYPDPNCKDDVWDSAKKEVGKSVSKYFQNPPATESEKPEPKKKLGQRVLIICGT 620
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
YSIGKE + +AI+KAL KI+A+ S+ ++ + PEL+ L + + +H+ + ++
Sbjct: 621 YSIGKERICVAIAKALRSKIFASPSKIKICKQLGDPELTALLTSDPIEAQVHMQMLMEIR 680
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTY----SETVG----------NQL---------- 395
ETL++YL Y ++ ++ FRP+GW + S++VG QL
Sbjct: 681 AETLQEYLNSYKPHFSRIVGFRPSGWNFRPVNSKSVGANAAPSAIATEQLLHSKGWRTRF 740
Query: 396 ---DLIRPLSRGNIT---IYGVPYSEHSSFTELREFV 426
D + RG+ +GVPYSEHSSF EL F+
Sbjct: 741 GVADFV--PQRGSTKEAMCFGVPYSEHSSFRELALFL 775
>gi|358391575|gb|EHK40979.1| hypothetical protein TRIATDRAFT_127244 [Trichoderma atroviride IMI
206040]
Length = 785
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/457 (32%), Positives = 219/457 (47%), Gaps = 111/457 (24%)
Query: 72 QANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTA----------THLKKIVDRSCP 121
QAN +M N+E++ FS KL + N + +A + + +R+CP
Sbjct: 268 QANPLEM-----NTENKPKSAFS----KLMSGNAEDSAWATAAAAETASRGRPAYERTCP 318
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRM 181
FYK +PG VDAFRYG+++GC AYFL+HFH DHY GL W HGPIYCS +T LV+
Sbjct: 319 FYKIMPGFAICVDAFRYGAVEGCQAYFLSHFHSDHYIGLTASWRHGPIYCSKVTGSLVKQ 378
Query: 182 CLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-------QCYL 231
L ++ LE + + +G VT++ ANHCPG++L F G + L
Sbjct: 379 QLRTAAKWVVELEFEKPYDVPGTEGATVTMMPANHCPGSSLFLFEKPFGNGPNKRTKRIL 438
Query: 232 HTGDFRASRLMQSYPLLVN------------HRVNVLYLDTTYCNPKYKFPSKEDVLNYV 279
H GDFRA +PLL + R+++ YLDTTY NP+Y FP + DV+
Sbjct: 439 HCGDFRACPEHVRHPLLKSDVIDSISGKSRQQRIDICYLDTTYLNPRYSFPPQGDVIQAC 498
Query: 280 VRLTK------NCL------------------------------------KKQPKTLVVV 297
L NC +++ + LV+
Sbjct: 499 ADLIASMSPDPNCADDVWQRSEKSAGTGTVSKYFQSDKPSDDGAQSKSKSQRKHRLLVIC 558
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YSIGKE + +AI+KALG KI+A+A++ ++ + D PEL+ L + + +H+ +
Sbjct: 559 GTYSIGKERICVAIAKALGSKIFASAAKIKICKQLDDPELTALLTSDPIEAQVHMQMLME 618
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS--------------- 402
++ ETL+DYL Y ++ ++ FRP+GW + G + P S
Sbjct: 619 IRAETLQDYLDSYRPHFSRIVGFRPSGWNFRPGNGRVIGANTPPSSISTQQLLHGKGWRT 678
Query: 403 ----------RGNIT---IYGVPYSEHSSFTELREFV 426
RG+ +GVPYSEHSSF EL FV
Sbjct: 679 RFGAKDLVAQRGSTKEAMCFGVPYSEHSSFRELAMFV 715
>gi|240273448|gb|EER36968.1| DNA cross-link repair protein pso2/snm1 [Ajellomyces capsulatus
H143]
Length = 841
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 204/408 (50%), Gaps = 84/408 (20%)
Query: 101 KASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGL 160
+A+ K A+ K+ +R+CPFYK IPG VDAFRYG+I+GC+AYFL+HFH DHY GL
Sbjct: 385 EAATAKEEASRGKQAHERTCPFYKIIPGFSTCVDAFRYGAIEGCTAYFLSHFHSDHYIGL 444
Query: 161 GKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID---GVKVTLLEANHCPGA 217
W HG IYCS +T LVR L V+P ++ +E + I G +VT+L ANHCPG+
Sbjct: 445 TSSWCHGQIYCSTVTGNLVRQQLKVDPKWVTDIEFDQPFEIPRTCGARVTMLPANHCPGS 504
Query: 218 ALIHF-------RLQDGQCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYL 258
++ F R + LH GDFRAS +P+L ++V YL
Sbjct: 505 SIFLFEKRVNKSREPKVRRILHCGDFRASPTHVQHPILRPDITDSLTGKVRQQIIDVCYL 564
Query: 259 DTTYCNPKYKFPSK-------------------------EDVLNYVVRLTKNCLKKQPKT 293
DTTY NPKY FPS+ E L+++ K+ + Q T
Sbjct: 565 DTTYLNPKYAFPSQDDVVAACAAVCADLNVTEHGHSTDSECRLSHLKTSGKSDMDPQAPT 624
Query: 294 -------------LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGN 340
LVV+G YSIGKE + +AI+ AL KIYA A+++R+L + ELS
Sbjct: 625 LLPYAQSESRNRLLVVIGTYSIGKERLCMAIAHALNCKIYAPAAKQRILACLENSELSSL 684
Query: 341 LCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRP 400
+ + +H++ M + TL DYL ++ V+ FRPTGW+Y G D P
Sbjct: 685 VTNNPVEAQVHMVTMMDVHTGTLLDYLHSLKPHFSRVVGFRPTGWSYRPPAGRMTDSP-P 743
Query: 401 LS--------------------RGNITI---YGVPYSEHSSFTELREF 425
+S RG+ I Y VPYSEHSSF EL F
Sbjct: 744 VSSVLYSDSWKPRFATQDLIPQRGSNQISSCYSVPYSEHSSFRELTMF 791
>gi|325087347|gb|EGC40657.1| DNA cross-link repair protein pso2/snm1 [Ajellomyces capsulatus
H88]
Length = 841
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 204/408 (50%), Gaps = 84/408 (20%)
Query: 101 KASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGL 160
+A+ K A+ K+ +R+CPFYK IPG VDAFRYG+I+GC+AYFL+HFH DHY GL
Sbjct: 385 EAATAKEEASRGKQAHERTCPFYKIIPGFSTCVDAFRYGAIEGCTAYFLSHFHSDHYIGL 444
Query: 161 GKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID---GVKVTLLEANHCPGA 217
W HG IYCS +T LVR L V+P ++ +E + I G +VT+L ANHCPG+
Sbjct: 445 TSSWCHGQIYCSTVTGNLVRQQLKVDPKWVTDIEFDQPFEIPRTCGARVTMLPANHCPGS 504
Query: 218 ALIHF-------RLQDGQCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYL 258
++ F R + LH GDFRAS +P+L ++V YL
Sbjct: 505 SIFLFEKRVNKSREPKVRRILHCGDFRASPTHVQHPILRPDITDSLTGKVRQQIIDVCYL 564
Query: 259 DTTYCNPKYKFPSK-------------------------EDVLNYVVRLTKNCLKKQPKT 293
DTTY NPKY FPS+ E L+++ K+ + Q T
Sbjct: 565 DTTYLNPKYAFPSQDDVVAACAAVCADLNVTEHGHSTDSECRLSHLKTSGKSDMDPQAPT 624
Query: 294 -------------LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGN 340
LVV+G YSIGKE + +AI+ AL KIYA A+++R+L + ELS
Sbjct: 625 LLPYAQSESRNRLLVVIGTYSIGKERLCMAIAHALNCKIYAPAAKQRILACLENSELSSL 684
Query: 341 LCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRP 400
+ + +H++ M + TL DYL ++ V+ FRPTGW+Y G D P
Sbjct: 685 VTNNPVEAQVHMVTMMDVHTGTLLDYLHSLKPHFSRVVGFRPTGWSYRPPAGRMTDSP-P 743
Query: 401 LS--------------------RGNITI---YGVPYSEHSSFTELREF 425
+S RG+ I Y VPYSEHSSF EL F
Sbjct: 744 VSSVLYSDSWKPRFATQDLIPQRGSNQISSCYSVPYSEHSSFRELTMF 791
>gi|224011619|ref|XP_002295584.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583615|gb|ACI64301.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 192/337 (56%), Gaps = 36/337 (10%)
Query: 120 CPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
CP YK+I GT F D F Y YFLTHFH DHYGG+ K WS G IYCS TA LV
Sbjct: 1 CPSYKRITGTDFICDGFFYAKRSLSENYFLTHFHSDHYGGITKNWSEGTIYCSLPTANLV 60
Query: 180 RMCLLVNPSYIHPLELNTEHVIDG----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
L V+ Y+HPL +NT +I + VTLL+ANHCPGA + F + + + LH GD
Sbjct: 61 NDQLGVDRRYLHPLPMNTPTIIASKGTPITVTLLDANHCPGAIMFLFEVGNKKI-LHVGD 119
Query: 236 FR-ASRLMQSYPLL-----VNHRVNVLYLDTTYCNPKYKFPSK----EDVLNYVVRLTKN 285
FR S LM P L +N R++ ++LDTTYCNPKY P++ + R
Sbjct: 120 FRWNSELMLRMPQLRAFSQLNPRLDEIFLDTTYCNPKYTLPTQEEAIAAAIEVAEREVAT 179
Query: 286 CLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNL-CTQ 344
+++ KTL + G+Y+IGKE ++L++++ L +K+Y + R R+L + +WP+ N+ T
Sbjct: 180 AKREKTKTLFLFGSYTIGKEKIYLSVAERLKLKVYVDKRRYRILSALEWPKERMNMFTTN 239
Query: 345 GNDTLLHVLPMSSLKFETLKDYLKPYGNQ-------YAAVLAFRPTGWTYSE-------- 389
++ L V+P+ + F+ +++++ GN+ Y V+ FRPTGWTYS
Sbjct: 240 KTESCLWVVPLGQVNFKQMREFMDE-GNKNNVFSAPYGRVVGFRPTGWTYSSPKKSTKPF 298
Query: 390 ----TVGNQLDLIRPLSRGNITIYGVPYSEHSSFTEL 422
+ + +LI + G ++GVPYSEHSSF EL
Sbjct: 299 STSPSKKSGRNLISTKTSGRYAVHGVPYSEHSSFPEL 335
>gi|339245771|ref|XP_003374519.1| DNA cross-link repair 1A protein [Trichinella spiralis]
gi|316972306|gb|EFV55989.1| DNA cross-link repair 1A protein [Trichinella spiralis]
Length = 517
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 189/340 (55%), Gaps = 35/340 (10%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R CP YK +PGT F VDAF++G I YFL+HFHYDHY GL + + PI CS +TA
Sbjct: 150 RRCPKYKFVPGTSFVVDAFKFGKIPDIELYFLSHFHYDHYVGLTRHFD-APICCSQITAS 208
Query: 178 LVRMCLLVNPSYIHPLELNT-EHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
LV + L V S++ L +N + D V L++ANHCPGA + F L++ LHTGDF
Sbjct: 209 LVHLKLKVPKSFLRVLSVNEWIDLGDDNSVILIDANHCPGAVMFLFHLKNDHYVLHTGDF 268
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
RA R++ P+ + RV+ LYLDTTY NP Y FP + + ++ + K ++ K L++
Sbjct: 269 RAERVVLDNPIWSSIRVDYLYLDTTYFNPAYIFPCQMVAITKMISIVKQIQQQHNKLLIL 328
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMS 356
VG Y +GKE +F A+++AL K+ ++ + L+ FD +LS +L + T LHV+ M
Sbjct: 329 VGTYEVGKERIFTALAEALDCKVAVEKNKMQTLKCFDDKKLSDSLTLLKSSTFLHVVSMG 388
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYG------ 410
L + L YL Y Y ++A +PTGW +S + L ++ +++ ITI G
Sbjct: 389 VLNRQKLTAYLASYPT-YEHLVAIKPTGWEFSGRTEDNLIDVQKMNK--ITILGKRFIFR 445
Query: 411 ------------------------VPYSEHSSFTELREFV 426
VPYSEHSSF EL++FV
Sbjct: 446 IYVLQYVGCGPESLRNFSGKASARVPYSEHSSFAELKQFV 485
>gi|322708982|gb|EFZ00559.1| DNA cross-link repair protein pso2/snm1 [Metarhizium anisopliae
ARSEF 23]
Length = 845
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 194/404 (48%), Gaps = 96/404 (23%)
Query: 117 DRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
+R+CPFYK IPG VDAFRYG++KGC AYFL+HFH DHY GL W HGPIYCS +T
Sbjct: 374 ERTCPFYKIIPGFNICVDAFRYGAVKGCEAYFLSHFHSDHYIGLTANWMHGPIYCSKVTG 433
Query: 177 RLVRMCLLVNPSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRL------- 224
LV+ L ++ +EL+ E D G VT++ ANHCPG++L F+
Sbjct: 434 SLVKQQLRTAAKWV--VELDFEKSYDVPGTGGATVTMIPANHCPGSSLFLFQKPADKYTN 491
Query: 225 QDGQCYLHTGDFRASRLMQSYPL------------LVNHRVNVLYLDTTYCNPKYKFPSK 272
+ G+ LH GDFRA ++PL L +++ YLDTTY NP+Y FP +
Sbjct: 492 RRGKRILHCGDFRACPAHVTHPLIKPDIQDATTGKLSQQTIDICYLDTTYLNPRYSFPPQ 551
Query: 273 EDVLNYVVRL------------------------------------------TKNCLKKQ 290
DV+ + TK K
Sbjct: 552 ADVIKACADMCASLSPDPTCKDDFWETGAKEKGAQAVSKYFQSTTQSNGAVGTKTSPKLG 611
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
+ LVV G YSIGKE + +AI+KAL KI+A + ++ + D PEL+G L + + +
Sbjct: 612 QRLLVVCGTYSIGKERICVAIAKALKSKIFAIPRKIKICKQLDDPELAGLLTSNPVEAQV 671
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD-------------- 396
H+ + ++ ETL++YL Y ++ ++ FRP+GW Y Q+
Sbjct: 672 HMQSLMEIRAETLQEYLNGYKGHFSRIVGFRPSGWNYRPPSSKQMSADVSPTSIQTQQIL 731
Query: 397 --------------LIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ +P S +GVPYSEHSSF EL F+
Sbjct: 732 HGKGWRSRFGYKDFVAQPGSTKEAMCFGVPYSEHSSFRELSMFI 775
>gi|213408198|ref|XP_002174870.1| DNA cross-link repair protein pso2/snm1 [Schizosaccharomyces
japonicus yFS275]
gi|212002917|gb|EEB08577.1| DNA cross-link repair protein pso2/snm1 [Schizosaccharomyces
japonicus yFS275]
Length = 573
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 186/347 (53%), Gaps = 31/347 (8%)
Query: 107 STATHLKKIVDRSCPFYKKIP-GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS 165
ST+ L+ R+ P YK +P PF VDAF+YG I G AYFL+HFH DHYGGL W
Sbjct: 182 STSIVLRNKKQRTVPRYKLMPFNIPFAVDAFKYGKIDGVEAYFLSHFHSDHYGGLSSSWC 241
Query: 166 HGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL- 224
HGPIYCS +T RL+ L V+ YI L N H + GV V ++ ANHCPG+++ F
Sbjct: 242 HGPIYCSSVTGRLLENILHVDKKYIKCLSENEPHNVYGVTVFVIPANHCPGSSIFLFETI 301
Query: 225 --QDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVV-- 280
+ + LHTGDFRA R +PLL + ++ LYLDTTY +PKY P++ +V+N
Sbjct: 302 HSEGTKRVLHTGDFRACRAHIEHPLLRDKHIHRLYLDTTYLDPKYMLPAQSEVVNACAEK 361
Query: 281 -RLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSG 339
RL + + LVVV YSIGKE V +AI+KAL IY + +R++L + EL
Sbjct: 362 CRLLQEA--DASRLLVVVSTYSIGKEKVAVAIAKALKTLIYVDDRKRKILDQLEDEELQQ 419
Query: 340 NLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIR 399
L N +H+ M E L DYL + +++FR TGW Y G +L ++
Sbjct: 420 LLTDDPNTASVHMATMMQTHPEALSDYLNKRRPTFDRIVSFRVTGWEYRPK-GKKLSVVS 478
Query: 400 PL------------------SRG---NITIYGVPYSEHSSFTELREF 425
L +RG + + PYSEHSSF +L F
Sbjct: 479 NLNSILTSPPAPFGPRDLRMARGSSPSCVSFLAPYSEHSSFYDLSVF 525
>gi|225554413|gb|EEH02711.1| DNA cross-link repair protein pso2/snm1 [Ajellomyces capsulatus
G186AR]
Length = 843
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 204/408 (50%), Gaps = 84/408 (20%)
Query: 101 KASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGL 160
+A+ K A+ K+ +R+CPFYK IPG VDAFRYG+I+GC+AYFL+HFH DHY GL
Sbjct: 387 EAAIAKEEASRGKQAHERTCPFYKIIPGFSTCVDAFRYGAIEGCTAYFLSHFHSDHYIGL 446
Query: 161 GKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID---GVKVTLLEANHCPGA 217
W HG IYCS +T LVR L V+P ++ +E + I G +VT+L ANHCPG+
Sbjct: 447 TSSWCHGQIYCSTVTGNLVRQQLKVDPKWVTDIEFDQPFEIPRTCGARVTMLPANHCPGS 506
Query: 218 ALIHF-------RLQDGQCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYL 258
++ F R + LH GDFRAS +P+L ++V YL
Sbjct: 507 SIFLFEKRVNKSREPKVRRILHCGDFRASPTHVQHPILRPNITDSLTGKVRQQIIDVCYL 566
Query: 259 DTTYCNPKYKFPSK-------------------------EDVLNYVVRLTKNCLKKQPKT 293
DTTY NPKY FPS+ E L+++ K+ + Q T
Sbjct: 567 DTTYLNPKYAFPSQDDVVAACAAVCADLNVTEHGHSTDSECRLSHLKTSGKSDMDPQAPT 626
Query: 294 -------------LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGN 340
LVV+G YSIGKE + +AI+ AL KIYA A+++R+L + ELS
Sbjct: 627 LLPYAQSESRNRLLVVIGTYSIGKERLCMAIAHALNCKIYAPAAKQRILACLENSELSTL 686
Query: 341 LCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRP 400
+ + +H++ M + TL DYL ++ V+ FRPTGW+Y G D P
Sbjct: 687 ITNNPVEAQVHMVTMMDVHTGTLLDYLHSLKPHFSRVVGFRPTGWSYRPPAGRMTDSP-P 745
Query: 401 LS--------------------RGNITI---YGVPYSEHSSFTELREF 425
+S RG+ I Y VPYSEHSSF EL F
Sbjct: 746 VSSILYSDSWKPRFGTQDLIPQRGSNQISSCYSVPYSEHSSFRELTMF 793
>gi|195451117|ref|XP_002072775.1| GK13503 [Drosophila willistoni]
gi|194168860|gb|EDW83761.1| GK13503 [Drosophila willistoni]
Length = 652
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 184/313 (58%), Gaps = 13/313 (4%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CP YK + GT F VD F++G I + YFL+H+H DHY GL +++S PIY SP TAR
Sbjct: 220 KPCPPYKIVEGTNFCVDGFQFGVIPNVTHYFLSHYHADHYIGLTRKFS-LPIYMSPTTAR 278
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LVR + ++ YI+ ++++ +ID +++T ++ANHCPGA + F+L GQ LHTGDFR
Sbjct: 279 LVRTFIKLDDIYINEIDVDQTIIIDNIEITAIDANHCPGALMFFFKLSSGQTILHTGDFR 338
Query: 238 ASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ--PKTL 294
A+ M+S P+ N+ +++VLYLDTTY N Y F + + ++ V L K K + L
Sbjct: 339 ANFEMESLPIFWNNPQLDVLYLDTTYLNKNYDFSHQSESIDRAVSLVKEFHNKHKDKRIL 398
Query: 295 VVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLP 354
V GAY IGKE ++L ++K +K++ RR + P+ L N+ LHV+
Sbjct: 399 HVCGAYVIGKEKIWLTVAKEFKLKVWTEPHRRAAIDCLHLPDAETYLYDDPNEANLHVIG 458
Query: 355 MSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYS 414
+ + + +L Y Y ++Y +LA RP+GW + +P I++ G+ YS
Sbjct: 459 LGQISYPSLVQYFDLYQDKYDMILALRPSGWEKNR---------KPSYGKRISVIGIEYS 509
Query: 415 EHSSFTELREFVQ 427
EHSS+ EL FV+
Sbjct: 510 EHSSYKELERFVR 522
>gi|154271294|ref|XP_001536500.1| hypothetical protein HCAG_08282 [Ajellomyces capsulatus NAm1]
gi|150409170|gb|EDN04620.1| hypothetical protein HCAG_08282 [Ajellomyces capsulatus NAm1]
Length = 835
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/412 (37%), Positives = 206/412 (50%), Gaps = 87/412 (21%)
Query: 101 KASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGL 160
+A+ K A+ K+ +R+CPFYK IPG VDAFRYG+I+GC+AYFL+HFH DHY GL
Sbjct: 374 EAATAKEEASRGKQAHERTCPFYKIIPGFSTCVDAFRYGAIEGCTAYFLSHFHSDHYIGL 433
Query: 161 GKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGA 217
W HG IYCS +T LVR L V+P ++ +E + I G +VT+L ANHCPG+
Sbjct: 434 TPSWCHGQIYCSTVTGNLVRQQLKVDPKWVTDIEFDKPFEIPRTSGARVTMLPANHCPGS 493
Query: 218 ALIHFRLQDGQCY-------LHTGDFRASRLMQSYPLL------------VNHRVNVLYL 258
++ F + + + LH GDFRAS +P+L ++V YL
Sbjct: 494 SIFLFEKRVNKSHEPKVRRILHCGDFRASPTHVQHPILRPDITDSLTGKVRQQIIDVCYL 553
Query: 259 DTTYCNPKYKFPSK----------EDVLNYV---------VRLT----------KNCLK- 288
DTTY NPKY FPS+ LN RL+ CLK
Sbjct: 554 DTTYLNPKYAFPSQDDVVAACAAVCADLNVTEHGHSTDSECRLSHLKTSGQSDMDVCLKA 613
Query: 289 -------------KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWP 335
+ + LVV+G YSIGKE + +AI+ AL KIYA A+++R+L +
Sbjct: 614 PQAPTLLPYAQSESRNRLLVVIGTYSIGKERLCMAIAHALNCKIYAPAAKQRILACLENS 673
Query: 336 ELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-------- 387
ELS + + +H++ M + TL DYL ++ V+ FRPTGW+Y
Sbjct: 674 ELSALITNNPVEAQVHMVTMMDVHTGTLLDYLHSLKPHFSRVVGFRPTGWSYRPPAGRMT 733
Query: 388 -SETVGNQL------------DLIRPLSRGNI-TIYGVPYSEHSSFTELREF 425
S TV + L DLI I + Y VPYSEHSSF EL F
Sbjct: 734 DSPTVSSVLYSDSWKPRFATKDLIPQRGSNQISSCYSVPYSEHSSFRELTMF 785
>gi|392589814|gb|EIW79144.1| DRMBL-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 468
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 189/383 (49%), Gaps = 74/383 (19%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I +AYFLTH H DHY L W GPIYCS TA
Sbjct: 36 RKAPFYKVLQGMPIAVDAFRYGTIPNVTAYFLTHAHSDHYTNLSSSWKSGPIYCSEGTAN 95
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR----------- 223
L+ L V+ ++HPL ++T + GV VTL+EANHCPG+ L F
Sbjct: 96 LIIHMLSVDRKWVHPLPMDTPVEVPDTGGVTVTLIEANHCPGSCLFLFEGRQTVNAGDSA 155
Query: 224 -------LQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
Q YLH GDFRAS +P + ++ +YLDTTY +PKY FP + V+
Sbjct: 156 FRSHFVGTQRVFRYLHCGDFRASPRHVMHPAVKGKPLDTVYLDTTYLDPKYTFPPQAMVI 215
Query: 277 NYVVRLTKNCLKKQ---------------------------------PKTLVVVGAYSIG 303
+ L K + + +TLVVVG YSIG
Sbjct: 216 DSCAELAKKIVHGEGASNRHGANRTMNSFFTSSTSEVKREAEETPTGQRTLVVVGTYSIG 275
Query: 304 KESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETL 363
KE + AI+ AL K+Y +A + +L+ + PEL L +H+LP+ + + L
Sbjct: 276 KERIVKAIANALNTKVYCDARKAAILRCQNDPELDALLTKDPVQGGVHLLPLGMIVSDKL 335
Query: 364 KDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRP--LSRGN---------------- 405
K YL+ + + Y+ VL FRPTGWTY+ G+ + P +SRG
Sbjct: 336 KPYLQRFKSTYSRVLGFRPTGWTYTPPSGSDMSPSIPAIISRGQAKVFNCADLRPMQKSS 395
Query: 406 --ITIYGVPYSEHSSFTELREFV 426
+ +YGVPYSEHSSF EL F
Sbjct: 396 FELQMYGVPYSEHSSFFELTCFA 418
>gi|259483913|tpe|CBF79690.1| TPA: interstrand crosslink repair protein (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 832
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 193/384 (50%), Gaps = 86/384 (22%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNP 187
G +VDAFRYG+++ C+AYFL+HFH DHY GL K W HGPIYCS TA LVR L V+P
Sbjct: 401 GFSISVDAFRYGAVESCNAYFLSHFHSDHYIGLSKSWRHGPIYCSRATANLVRQQLKVDP 460
Query: 188 SYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR--LQDG-----QCYLHTGDFR 237
++ L+ + + GV+VT++EANHCPG+A+ F + G Q LH GDFR
Sbjct: 461 KWVVDLDFEKKTEVPGTGGVQVTMIEANHCPGSAIFLFEKAVSSGASTRIQRVLHCGDFR 520
Query: 238 ASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL--- 282
AS + LL R++ YLDTTY +PKY FP + DV+N L
Sbjct: 521 ASPQHVQHALLRPDVVDPKTGKRWQQRIDACYLDTTYLSPKYAFPRQSDVINACAELCVR 580
Query: 283 ----------------------TKNCLKK-------------QP----KTLVVVGAYSIG 303
+KN + K QP + LVV+G YSIG
Sbjct: 581 IDQGQYDSLGHMPFQTATPTTKSKNPISKFMSAATAAVKPSTQPEPKGRLLVVIGTYSIG 640
Query: 304 KESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETL 363
KE + LAI++AL KIYA +++RV + PELS L +H+ + ++ ETL
Sbjct: 641 KERICLAIARALKSKIYATPAKQRVCACLEDPELSALLTDDPLQAQVHMQTLFEIRAETL 700
Query: 364 KDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD-----------------LIRPLS--RG 404
DYL + V+ FRPTGWTY G L+ +R L+ RG
Sbjct: 701 CDYLDSMKPHFTRVIGFRPTGWTYRPPAGRTLENPPVSTVLYSSHWKTPFSVRDLTPQRG 760
Query: 405 NI---TIYGVPYSEHSSFTELREF 425
+ +GVPYSEHSSF EL F
Sbjct: 761 STRESACFGVPYSEHSSFRELTMF 784
>gi|322693286|gb|EFY85152.1| DNA repair protein Pso2/Snm1, putative [Metarhizium acridum CQMa
102]
Length = 844
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 197/404 (48%), Gaps = 96/404 (23%)
Query: 117 DRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
+R+CPFYK IPG VDAFRYG++KGC AYFL+HFH DHY GL W HGPIYCS +T
Sbjct: 373 ERTCPFYKIIPGFNICVDAFRYGAVKGCEAYFLSHFHSDHYIGLTANWMHGPIYCSKVTG 432
Query: 177 RLVRMCLLVNPSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRL------- 224
LV+ L ++ +EL+ E D G VT++ ANHCPG++L F+
Sbjct: 433 SLVKQQLGTAAKWV--VELDFEKSYDVPGTVGATVTMIPANHCPGSSLFLFQKPADNNTN 490
Query: 225 QDGQCYLHTGDFRASRLMQSYPL------------LVNHRVNVLYLDTTYCNPKYKFPSK 272
G+ LH GDFRA ++PL L +++ YLDTTY NP+Y FP +
Sbjct: 491 SRGKRILHCGDFRACPAHVTHPLIKPDIQDAITGKLSQQTIDICYLDTTYLNPRYSFPPQ 550
Query: 273 EDVL----------------------------------NYVVRLTKNCLKKQPKT----- 293
DV+ Y TK+ + KT
Sbjct: 551 ADVIKACADLCASLSPDPTCKDDFWEKGAKEKGTQAVSKYFQSTTKSNDAVEAKTSSKLG 610
Query: 294 ---LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
LV+ G YSIGKE + +AI+KAL KI+A +R++ + D PEL+G L + + +
Sbjct: 611 QRLLVICGTYSIGKERICVAIAKALKSKIFAIPRKRKICKQLDDPELAGLLTSNPVEAQV 670
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL-IRPLS------- 402
H+ + ++ ETL++YL Y ++ ++ FRP+GW Y Q+ P S
Sbjct: 671 HMQSLMEIRAETLQEYLNGYKGHFSRIVGFRPSGWNYRPPNSKQMSADASPTSIQTQQIL 730
Query: 403 -----------------RGNIT---IYGVPYSEHSSFTELREFV 426
RG+ +GVPYSEHSSF EL F+
Sbjct: 731 HGKGWRSRFGYKDFVAQRGSTKEAMCFGVPYSEHSSFRELAMFI 774
>gi|342874373|gb|EGU76387.1| hypothetical protein FOXB_13065 [Fusarium oxysporum Fo5176]
Length = 849
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/409 (35%), Positives = 205/409 (50%), Gaps = 93/409 (22%)
Query: 109 ATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP 168
A+ K+ +R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL RW HGP
Sbjct: 373 ASRGKQAYERTCPFYKIMPGFSICVDAFRYGAVQGCKAYFLSHFHSDHYIGLTARWCHGP 432
Query: 169 IYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR-- 223
IYCS +T LVR L ++ LE + + I +G KVT++ ANHCPG++L F
Sbjct: 433 IYCSKVTGSLVRNQLRTAAKWVVELEFDKSYDIPGTEGAKVTMIPANHCPGSSLFLFEKT 492
Query: 224 -LQDG----QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPK 266
QD Q LH GDFRA +PLL ++++ YLDTTY NP+
Sbjct: 493 MKQDPNSRVQRILHCGDFRACPAHVKHPLLKPETIDAISGKAKQQKIDICYLDTTYLNPR 552
Query: 267 YKFPSKEDVLNYVVRL--------------------------------TK-------NCL 287
Y FP + DV+ L TK +
Sbjct: 553 YSFPPQNDVIKACADLCGSLSPDPNYKDDIWEKASGQGTPAVSKFFPNTKPDENAKVDTK 612
Query: 288 KKQPKTLVVV-GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
KK P+ L+V+ G YSIGKE + ++I+KAL KI+A+ + ++ + D PEL+ L +
Sbjct: 613 KKHPQRLLVICGTYSIGKERICISIAKALKSKIFASPGKIKICKQLDDPELTALLTSDPL 672
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY---SETVGNQL-------- 395
+ +H+ + ++ ETL++YL Y ++ ++ RP+GW + +T+G
Sbjct: 673 EAQVHMQMLMEIRAETLQEYLNSYKPYFSRIVGLRPSGWNFRPAGKTIGANTPPGSIHTQ 732
Query: 396 ---------------DLIRPLSRGNIT---IYGVPYSEHSSFTELREFV 426
D I RG+ +GVPYSEHSSF EL FV
Sbjct: 733 QILHDKGWRTRFGYKDFI--PQRGSTKEAMCFGVPYSEHSSFRELAMFV 779
>gi|164658888|ref|XP_001730569.1| hypothetical protein MGL_2365 [Malassezia globosa CBS 7966]
gi|159104465|gb|EDP43355.1| hypothetical protein MGL_2365 [Malassezia globosa CBS 7966]
Length = 503
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 197/374 (52%), Gaps = 66/374 (17%)
Query: 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYC 171
L K +R PF+K + G P VDAFRYG+I+GC+AYFLTHFH DHY GL W HGPIYC
Sbjct: 80 LSKTHNRRIPFFKVLDGMPLAVDAFRYGAIEGCTAYFLTHFHSDHYAGLSSTWKHGPIYC 139
Query: 172 SPLTARLVRMCLLVNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFR----- 223
+P T+RLV L V+ ++ P+ L+ +I GV VT ++ANHCPG+ L F
Sbjct: 140 TPATSRLVHAKLRVDKMWLRPIALDVRTLIPDSGGVYVTCIDANHCPGSCLFLFEGPLTA 199
Query: 224 ------LQDGQC-------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFP 270
+++ YLH GDFRA +++P L ++ +YLDTTY +P+Y FP
Sbjct: 200 HILPSSIRNPHIGTSRVFRYLHCGDFRACPAHKTHPALQLGILDAIYLDTTYLDPRYCFP 259
Query: 271 SKEDVLNYVVRLT------------KNCLKKQPKT----LVVVGAYSIGKESVFLAISKA 314
+ V+ + L + KQP+ LVVVG+YSIGKE +FLA++KA
Sbjct: 260 PQAQVVQACIDLVVMPHAQPHDVTLMSAWLKQPQVRSQPLVVVGSYSIGKERLFLALAKA 319
Query: 315 LGVKIY-ANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPY--- 370
L IY A+A + D P L L +HV+ +++L +TL+ Y + +
Sbjct: 320 LDSCIYCADARKYETYALLDDPTLQSRLTKDPMSARVHVVTLNALSLDTLRAYTETFVRR 379
Query: 371 GNQYAAVLAFRPTGWTYSETVGNQL-------DLIRPL---------------SRGNITI 408
G + +A RPTGWT+S G L DL++ S + I
Sbjct: 380 GMSISHTIAIRPTGWTFS---GRSLAPKKSIDDLVKECVPPTFTYKQLEPQRQSTHAVRI 436
Query: 409 YGVPYSEHSSFTEL 422
Y VPYSEHSSF EL
Sbjct: 437 YAVPYSEHSSFYEL 450
>gi|389745539|gb|EIM86720.1| DRMBL-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 515
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 192/394 (48%), Gaps = 85/394 (21%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I G +AYFLTH H DHY L W GPIYCS TA
Sbjct: 65 RKAPFYKVMTGMPIAVDAFRYGAIPGVTAYFLTHAHSDHYTNLSSNWKAGPIYCSEGTAN 124
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR----LQDGQC- 229
L+ L V+ ++HPL ++ VI GV VTL+EANHCPG++L F + G
Sbjct: 125 LIIHMLSVDRKWVHPLPMDKPTVIPNTGGVTVTLIEANHCPGSSLFLFEGKQTIDAGDST 184
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRAS +P + ++++YLDTTY NPKY FPS+ V+
Sbjct: 185 FKSPFVGSSKMFRYLHCGDFRASPQHVLHPAVKGKHLDIIYLDTTYLNPKYCFPSQPQVI 244
Query: 277 NYVVRLTKNCL-----------------------------------------KKQPKTLV 295
+ L K + K L+
Sbjct: 245 DACAELAKRIVCGSGLDGGRAGGSTSVGKTVDKWFVAGPSIKVEDKGKTKAKATTDKILI 304
Query: 296 VVGAYSIGKESV--FLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL 353
VVG YSIGKE V F AI++AL K+Y ++ + +L+ PEL L + +H++
Sbjct: 305 VVGTYSIGKERVLPFSAIARALQTKVYCDSRKAAILRCQSDPELHAMLTKDPYEASVHLV 364
Query: 354 PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL------------------ 395
P+ + + LK+Y + + +A +AFRPTGWTY+ VG+
Sbjct: 365 PLGVVTSDRLKEYTERWKGHWAKAVAFRPTGWTYTPPVGSDTLPSISSIITKGNPHQSFT 424
Query: 396 -DLIRPLSRGNIT--IYGVPYSEHSSFTELREFV 426
++P+ T +YGVPYSEHSSF EL F
Sbjct: 425 HANLKPMRNSTFTHELYGVPYSEHSSFYELTCFT 458
>gi|409041196|gb|EKM50682.1| hypothetical protein PHACADRAFT_166360 [Phanerochaete carnosa
HHB-10118-sp]
Length = 461
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 188/380 (49%), Gaps = 71/380 (18%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I G +AYFLTH H DHY L W G IYCS TA
Sbjct: 31 RKAPFYKVMQGMPIAVDAFRYGTIPGVTAYFLTHAHSDHYTNLSSNWKSGAIYCSEGTAN 90
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQD----GQC- 229
L+ L V+ ++H L ++ V+ GV VTL+EANHCPG+ L F Q G
Sbjct: 91 LIVHMLRVDRKWVHALPMDATTVVPNTGGVTVTLIEANHCPGSCLFLFEGQQTVNAGDSA 150
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRAS +P + R++ +YLDTTY +PKY FP + +V+
Sbjct: 151 YKSTFVGSKRIFRYLHCGDFRASPQHVMHPAVRGKRIDTVYLDTTYLDPKYCFPPQSEVI 210
Query: 277 NYVVRLTKNC------------------------------LKKQPKTLVVVGAYSIGKES 306
+ L + + K +TLV+VG YSIGKE
Sbjct: 211 SACAELARRIVLDESSHVDTARNSRVDDFFSVHEKPKEKEVAKTERTLVIVGTYSIGKER 270
Query: 307 VFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDY 366
+ AI+KAL K+Y+++ + +L+ EL L + +H+LP+ ++ + LK Y
Sbjct: 271 IVKAIAKALQTKVYSDSRKTAILRCQADAELDALLTSDPLQAGVHLLPLGAISSDKLKAY 330
Query: 367 LKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL--------------------SRGNI 406
++ + + + FRPTGWT++ + G+ P S N+
Sbjct: 331 MEQWNGHWTRAIGFRPTGWTFTPSKGSDTSPSIPSVIAKSQVKLFTFADISASKNSTPNL 390
Query: 407 TIYGVPYSEHSSFTELREFV 426
+YGVPYSEHSSF EL F
Sbjct: 391 QLYGVPYSEHSSFFELTCFA 410
>gi|440640679|gb|ELR10598.1| hypothetical protein GMDG_04870 [Geomyces destructans 20631-21]
Length = 874
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 203/395 (51%), Gaps = 90/395 (22%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R CPFYK +PG VDAFRYG+++GC+AYFL+HFH DHY GL W HGPIYCS +T
Sbjct: 431 RVCPFYKIMPGFYICVDAFRYGAVQGCNAYFLSHFHSDHYIGLTASWCHGPIYCSKVTGN 490
Query: 178 LVRMCLLVNPSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFR--LQDG--- 227
LV+ L V+P ++ + LN E ++ GV VT++ ANHCPG++L F ++ G
Sbjct: 491 LVKQQLRVDPKWV--ITLNFEDKVEVPNTHGVSVTMIPANHCPGSSLFLFEKVVRKGPNP 548
Query: 228 --QCYLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFPSKE 273
Q LH GDFRA +P L+ +++V YLDTTY NP+Y FPS++
Sbjct: 549 KVQRILHCGDFRACPAHVEHPQLMPDIVDAITGKTRQQKIDVCYLDTTYLNPRYSFPSQD 608
Query: 274 DVL----NYVVRLTKN-------------------------------CLKKQPKT----- 293
+V+ + V ++K+ K PK
Sbjct: 609 EVVQSCADVCVSMSKDKGDNAWERAGKDRTGASMGRFVDAEVKSKDSATKADPKKPRGRL 668
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL 353
L++ G YSIGKE++ L I++AL KI+A S+++ + + PELS + T ++ +H+
Sbjct: 669 LILCGTYSIGKENICLGIARALDCKIWAPPSKQKTCAALEDPELSSRMTTNPHEAQIHMQ 728
Query: 354 PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL---------------- 397
+ ++ ETL+DYL ++ ++ FRP+GW Y +D
Sbjct: 729 SLMEIRAETLQDYLNGLKPHFSRIVGFRPSGWNYRPPNSRLVDSPSVAAVLTGENWRSRY 788
Query: 398 ----IRPLSRGNI---TIYGVPYSEHSSFTELREF 425
+ P RG+ +GVPYSEHSSF EL F
Sbjct: 789 TMADLNP-QRGSTHEAACFGVPYSEHSSFRELTMF 822
>gi|254570835|ref|XP_002492527.1| Required for a post-incision step in the repair of DNA single and
double-strand breaks [Komagataella pastoris GS115]
gi|238032325|emb|CAY70348.1| Required for a post-incision step in the repair of DNA single and
double-strand breaks [Komagataella pastoris GS115]
gi|328353461|emb|CCA39859.1| DNA cross-link repair protein pso2/snm1 [Komagataella pastoris CBS
7435]
Length = 624
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 195/389 (50%), Gaps = 62/389 (15%)
Query: 97 MKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTP--------FTVDAFRYGSIKGCSAYF 148
+KK K++ ++ ++K D K+IP F VDAF YG + YF
Sbjct: 193 VKKPKSAPKITSEERIEKSKDAIRNRAKQIPDVKILNFTSCKFAVDAFCYGQHPEITHYF 252
Query: 149 LTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDG--VKV 206
L+HFH DHY G+ K W +G IYCS +TA L+ + V+ + L N I+ VKV
Sbjct: 253 LSHFHADHYMGITKNWHNGIIYCSRITAELLVLKYNVSEEILRILPFNETMEIEDTQVKV 312
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPK 266
T+++ANHCPG+++ FR C LH GDFR ++ M L ++++N +YLDTTY +P
Sbjct: 313 TMMDANHCPGSSIFLFRDSKEHCILHCGDFRINKEM--IQKLASYKINEIYLDTTYLDPT 370
Query: 267 YKFPSKEDVLNYVVRLTKNCLK---------------------KQPKTLVVVGAYSIGKE 305
Y FP +E+V++ V +N + K K L+ VG Y+IGKE
Sbjct: 371 YNFPKQENVIDVVGTFCENIFRGVYQHPLQQRITDFFTFRKRSKTLKPLICVGTYTIGKE 430
Query: 306 SVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKD 365
+ + I+K L K+YA +S+R +L +F W EL L + + +H++PM + E L+
Sbjct: 431 RIAIDIAKRLKTKLYAQSSKREILNTFHWEELDTLLTSTPTEANVHLIPMQYMNLEQLEK 490
Query: 366 YLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNI------------------- 406
Y Y N ++ ++A RPTGWT+ N ++ LS+ I
Sbjct: 491 YFHSYRNDFSQIIAIRPTGWTFVSAKNNSTKWMKELSKSQILARIVKTKNDASRFDLESI 550
Query: 407 ----------TIYGVPYSEHSSFTELREF 425
IY VPYSEHSSF EL F
Sbjct: 551 EKQFNSDKVTQIYQVPYSEHSSFRELSFF 579
>gi|307107345|gb|EFN55588.1| hypothetical protein CHLNCDRAFT_134115 [Chlorella variabilis]
Length = 886
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 183/309 (59%), Gaps = 8/309 (2%)
Query: 123 YKKIPGTPFTVDAFRYGSIKGCSA---YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
++ +PGT F VD R+ ++ S +FLTHFH DHY GL R+ G +YCSP TA LV
Sbjct: 548 WQLVPGTSFVVD--RFSNLPQQSPHRHWFLTHFHADHYKGLTGRFDRGTLYCSPPTALLV 605
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ L V P+ I + LN+ +++GV+VT L+ANHCPGA +I F + LHTGD R
Sbjct: 606 QQQLRVKPACIRCVPLNSPILVEGVRVTFLDANHCPGAVMILFEPPGCRPVLHTGDCRLI 665
Query: 240 RLMQSYPLLVNHRVNV-LYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
MQ L R + LDTTYC+P+Y FPS+++VL + + K PKTL + G
Sbjct: 666 PEMQHEAALAAVRGQADIILDTTYCSPEYAFPSQQEVLRFAIDAVK-AEAFNPKTLFLFG 724
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWP-ELSGNLCTQGNDTLLHVLPMSS 357
+Y+IGKE +FL ++ L +IY +A++R+VL + P E + L T + T LH +P+
Sbjct: 725 SYTIGKERLFLEAARVLQRRIYVSAAKRKVLDCLELPQEYASLLTTDDHTTNLHAVPLWM 784
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + LK Y +++ + F+PTGWT+ R +G I Y VPYSEHS
Sbjct: 785 VSQKHMAKLLKHYRGRFSTAVGFQPTGWTHQRDASQAGARGRRRQKGTIITYQVPYSEHS 844
Query: 418 SFTELREFV 426
SF+ELR+FV
Sbjct: 845 SFSELRQFV 853
>gi|67901204|ref|XP_680858.1| hypothetical protein AN7589.2 [Aspergillus nidulans FGSC A4]
gi|40742979|gb|EAA62169.1| hypothetical protein AN7589.2 [Aspergillus nidulans FGSC A4]
Length = 2412
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 193/384 (50%), Gaps = 86/384 (22%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNP 187
G +VDAFRYG+++ C+AYFL+HFH DHY GL K W HGPIYCS TA LVR L V+P
Sbjct: 1428 GFSISVDAFRYGAVESCNAYFLSHFHSDHYIGLSKSWRHGPIYCSRATANLVRQQLKVDP 1487
Query: 188 SYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFR--LQDG-----QCYLHTGDFR 237
++ L+ + + GV+VT++EANHCPG+A+ F + G Q LH GDFR
Sbjct: 1488 KWVVDLDFEKKTEVPGTGGVQVTMIEANHCPGSAIFLFEKAVSSGASTRIQRVLHCGDFR 1547
Query: 238 ASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL--- 282
AS + LL R++ YLDTTY +PKY FP + DV+N L
Sbjct: 1548 ASPQHVQHALLRPDVVDPKTGKRWQQRIDACYLDTTYLSPKYAFPRQSDVINACAELCVR 1607
Query: 283 ----------------------TKNCLKK-------------QP----KTLVVVGAYSIG 303
+KN + K QP + LVV+G YSIG
Sbjct: 1608 IDQGQYDSLGHMPFQTATPTTKSKNPISKFMSAATAAVKPSTQPEPKGRLLVVIGTYSIG 1667
Query: 304 KESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETL 363
KE + LAI++AL KIYA +++RV + PELS L +H+ + ++ ETL
Sbjct: 1668 KERICLAIARALKSKIYATPAKQRVCACLEDPELSALLTDDPLQAQVHMQTLFEIRAETL 1727
Query: 364 KDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD-----------------LIRPLS--RG 404
DYL + V+ FRPTGWTY G L+ +R L+ RG
Sbjct: 1728 CDYLDSMKPHFTRVIGFRPTGWTYRPPAGRTLENPPVSTVLYSSHWKTPFSVRDLTPQRG 1787
Query: 405 NI---TIYGVPYSEHSSFTELREF 425
+ +GVPYSEHSSF EL F
Sbjct: 1788 STRESACFGVPYSEHSSFRELTMF 1811
>gi|408400662|gb|EKJ79739.1| hypothetical protein FPSE_00019 [Fusarium pseudograminearum CS3096]
Length = 844
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 201/407 (49%), Gaps = 89/407 (21%)
Query: 109 ATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP 168
A+ K+ +R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL RW HGP
Sbjct: 368 ASRGKQAYERTCPFYKIMPGFSICVDAFRYGAVQGCKAYFLSHFHSDHYIGLTARWCHGP 427
Query: 169 IYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR-- 223
IYCS +T LV+ L ++ LE + + I +G VT++ ANHCPG++L F
Sbjct: 428 IYCSKVTGSLVKNQLRTAAKWVVELEFDKPYDIPGTEGATVTMIPANHCPGSSLFLFEKT 487
Query: 224 LQDG-----QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPK 266
++ G Q LH GDFRA +PLL ++++ YLDTTY NPK
Sbjct: 488 MKQGSNSRVQRILHCGDFRACPAHVKHPLLKPDIVDSISGKIKQQKIDICYLDTTYLNPK 547
Query: 267 YKFPSKEDVLNYVVRL------TKNC--------------------------------LK 288
Y FP + DV+ L NC K
Sbjct: 548 YSFPPQNDVIKACADLCGSMSPDPNCKDDIWEKASGQGTPAVSKFFPNTKSDENDNVDTK 607
Query: 289 KQP--KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
K+P + LV+ G YSIGKE + ++I+KAL KI+A + ++ + D PELS L +
Sbjct: 608 KKPPQRLLVICGTYSIGKERICISIAKALKSKIFATPGKIKICKQLDDPELSALLTSDPL 667
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS---- 402
+ +H+ + ++ ETL++YL Y ++ ++ RP+GW + + +P S
Sbjct: 668 EAQVHMQMLMEIRAETLQEYLNSYKPYFSRIVGLRPSGWNFRPAGKSFGANTQPGSIHTQ 727
Query: 403 --------------------RGNIT---IYGVPYSEHSSFTELREFV 426
RG+ +GVPYSEHSSF EL F+
Sbjct: 728 QILHDSNWRTRFGYKDFVPQRGSTKEAMCFGVPYSEHSSFRELAMFL 774
>gi|340520526|gb|EGR50762.1| hypothetical protein TRIREDRAFT_3027 [Trichoderma reesei QM6a]
Length = 818
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 198/406 (48%), Gaps = 98/406 (24%)
Query: 117 DRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
+R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL W HGPIYCS +T
Sbjct: 345 ERTCPFYKIMPGFSICVDAFRYGAVEGCQAYFLSHFHSDHYIGLTANWRHGPIYCSKVTG 404
Query: 177 RLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG------ 227
LV+ L ++ LE + + DG VT++ ANHCPG++L F G
Sbjct: 405 SLVKQQLRTAAKWVVELEFEKSYDVPGTDGATVTMMPANHCPGSSLFLFEKPFGTGPNKR 464
Query: 228 -QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKED 274
+ LH GDFRA +PLL R+++ YLDTTY NP+Y FP + D
Sbjct: 465 VKRILHCGDFRACPQHVRHPLLKADVVDSISGKTKQQRIDICYLDTTYLNPRYSFPPQGD 524
Query: 275 VLNYVVRLTKNCL-------------------------------------------KKQP 291
V+ + + + +
Sbjct: 525 VIQACADMCASMAADSHCADDVWQRSEKSAGTGTMSKYFQSDKPAEDGEESKSSPSRPKQ 584
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
+ LV+ G YSIGKE + +AI+KALG KI+A+ ++ ++ + D PEL+ L + + +H
Sbjct: 585 RLLVICGTYSIGKERICVAIAKALGSKIFASPAKIKICKQLDDPELTALLTSDPVEAQVH 644
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-----SETVG----------NQL- 395
+ + ++ ETL++YL Y + ++ FRP+GW + S+ +G QL
Sbjct: 645 MQMLMEIRAETLQEYLDSYRPHFTRIVGFRPSGWNFRPGNGSKAIGANTPPSSISTQQLL 704
Query: 396 ------------DLIRPLSRGNI---TIYGVPYSEHSSFTELREFV 426
DL+ RG+ +GVPYSEHSSF EL FV
Sbjct: 705 HGKGWRTRFSAKDLV--AQRGSTREAMCFGVPYSEHSSFRELAMFV 748
>gi|170069015|ref|XP_001869076.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
gi|167865000|gb|EDS28383.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
Length = 757
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 189/344 (54%), Gaps = 22/344 (6%)
Query: 95 PPMKKLKASNGKSTATHLKKIVDRS------CPFYKKIPGTPFTVDAFRYGSIKGCSAYF 148
PP K A + AT K R P YK + GT F VDAFRYG I G + YF
Sbjct: 319 PPAKTPAAKRKSTVATTTKSTAKRRPRGPIIVPKYKIVAGTTFAVDAFRYGDIAGVTHYF 378
Query: 149 LTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTL 208
L+HFH DHY GL K + P+ SP+TA LV + V+ + L+L+ V+DGV++T
Sbjct: 379 LSHFHADHYIGLKKSFDK-PLIMSPITASLVAAFINVDRVHYILLDLHETIVLDGVRITA 437
Query: 209 LEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYK 268
L+ANHCPGA L F+L G LHTGDFRAS M+ YP N ++ LYLDTTY + KY
Sbjct: 438 LDANHCPGAVLFLFQLPTGTNLLHTGDFRASPAMEEYPEFWNMDIHTLYLDTTYLSTKYC 497
Query: 269 FPSKEDVLNYVVRLTKNCLKKQ--PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRR 326
F + + ++ VR K L + L+V G+Y +GKE V+L ++ G +++ +RR
Sbjct: 498 FKDQWESVSDAVREVKAFLGQNIGRNVLIVCGSYLVGKEKVWLELAARTGFRVWTEPNRR 557
Query: 327 RVLQ--SFDWP-ELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPT 383
+ + + + P + G + + +HVL M L ++ L Y+ + + VLA RP+
Sbjct: 558 KAVDAVAVECPLQTRGVIVDDPRNAQIHVLSMGKLAYDELVAYMDEHPER-ECVLALRPS 616
Query: 384 GWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
GW + RP RG I I G+ YSEHSS+ ELR FV+
Sbjct: 617 GWEKNS---------RPQYRGRINIVGIEYSEHSSYDELRRFVR 651
>gi|302923351|ref|XP_003053657.1| hypothetical protein NECHADRAFT_65714 [Nectria haematococca mpVI
77-13-4]
gi|256734598|gb|EEU47944.1| hypothetical protein NECHADRAFT_65714 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 200/403 (49%), Gaps = 89/403 (22%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K+ +R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL +W HGPIYCS
Sbjct: 366 KQAYERTCPFYKIMPGFSICVDAFRYGAVEGCKAYFLSHFHSDHYIGLTAKWRHGPIYCS 425
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR--LQDG 227
+T LV+ L ++ LE + I DG VT++ ANHCPG++L F+ ++ G
Sbjct: 426 KVTGSLVKQQLRTAEKWVVELEFEKPYDIPGTDGASVTMIPANHCPGSSLFLFQKNMRHG 485
Query: 228 -----QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA +PLL ++++ YLDTTY NP+Y FP
Sbjct: 486 IGSRVQRILHCGDFRACPAQVQHPLLKPEIVDSISGKVKQQKIDICYLDTTYLNPRYSFP 545
Query: 271 SKEDVLNYVVRL--------------------------------------TKNCLKKQPK 292
+ DV+ L K+ KK P+
Sbjct: 546 PQNDVIKACADLCGSMSPDPDCKDDVWEKSNAQGTQGVSKFFKGPKSNETGKDGAKKGPR 605
Query: 293 T--LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
LV+ G YSIGKE + ++I+KAL KI+A+ + ++ + PEL+ L + + +
Sbjct: 606 KRLLVICGTYSIGKERICISIAKALKSKIFASPGKIKICKQLGDPELTALLTSDPLEAQV 665
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY--------SETVGNQLDLIRPL- 401
H+ + L+ ETL++YL Y ++ ++ FRP+GW + + T + + L
Sbjct: 666 HMQMLMELRAETLQEYLNSYKPHFSRIVGFRPSGWNFRPAGKAIGANTSPGSIQTEQILH 725
Query: 402 ---------------SRGNIT---IYGVPYSEHSSFTELREFV 426
RG+ +GVPYSEHSSF EL FV
Sbjct: 726 GKGWRTRFGYKDFVPQRGSTKEAMCFGVPYSEHSSFRELAMFV 768
>gi|170072495|ref|XP_001870192.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
gi|167868761|gb|EDS32144.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
Length = 730
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 137/351 (39%), Positives = 195/351 (55%), Gaps = 23/351 (6%)
Query: 84 NSESEANCLFSPPMKKLKASNGKSTATHLKK--IVDRSCPFYKKIPGTPFTVDAFRYGSI 141
N E + C K + A++ KS A + I+ P YK + GT F VDAFRYG I
Sbjct: 290 NMEEDQGC--DAKRKSIVATSAKSAAKRRPRGPII---VPKYKIVAGTTFAVDAFRYGDI 344
Query: 142 KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI 201
G + YFL+HFH DHY GL K + P+ SP+TA LV + V+ + L+L+ V+
Sbjct: 345 AGVTHYFLSHFHADHYIGLKKSFDK-PLIMSPITASLVAAFINVDRVHYILLDLHETIVL 403
Query: 202 DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTT 261
DGV++T L+ANHCPGA L F+L G LHTGDFRAS M+ YP N ++ LYLDTT
Sbjct: 404 DGVRITALDANHCPGAVLFLFQLPTGTNLLHTGDFRASPAMEEYPEFWNMDIHTLYLDTT 463
Query: 262 YCNPKYKFPSKEDVLNYVVRLTKNCLKKQ--PKTLVVVGAYSIGKESVFLAISKALGVKI 319
Y + KY F + + ++ VR K L + L+V G+Y +GKE V+L ++ G ++
Sbjct: 464 YLSTKYCFKDQWESVSDAVREVKTFLGRNIGRNVLIVCGSYLVGKEKVWLELAARTGFRV 523
Query: 320 YANASRRRVLQ--SFDWP-ELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAA 376
+ +RR+ + + + P + G + D +HVL M L ++ L Y+ + +
Sbjct: 524 WTEPNRRKAVDAVAVECPLQTRGVIVDDPRDAQIHVLSMGKLAYDELVAYMDEHPER-EC 582
Query: 377 VLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
VLA RP+GW + RP RG I I G+ YSEHSS+ ELR FV+
Sbjct: 583 VLALRPSGWEKNS---------RPQYRGRINIVGIEYSEHSSYDELRRFVR 624
>gi|46105466|ref|XP_380537.1| hypothetical protein FG00361.1 [Gibberella zeae PH-1]
Length = 845
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/447 (32%), Positives = 213/447 (47%), Gaps = 93/447 (20%)
Query: 72 QANLFDMWGLKSNSESEANCLFSPPMK--KLKASNGKSTATHLKKIVDRSCPFYKKIPGT 129
QAN ++ G S ++ + L S + + + A+ K+ +R+CPFYK +PG
Sbjct: 330 QANPLEIIGPDSAPKTAFSKLMSSNAEDSAWQEAAAAENASRGKQAYERTCPFYKIMPGF 389
Query: 130 PFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSY 189
VDAFRYG+++GC AYFL+HFH DHY GL RW HG IYCS +T LV+ L +
Sbjct: 390 SICVDAFRYGAVQGCKAYFLSHFHSDHYIGLTARWCHGSIYCSKVTGSLVKNQLRTAAKW 449
Query: 190 IHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR--LQDG-----QCYLHTGDFRAS 239
+ LE + + I +G VT++ ANHCPG++L F ++ G Q LH GDFRA
Sbjct: 450 VVELEFDKPYDIPGTEGATVTMIPANHCPGSSLFLFEKTMKQGANSRVQRILHCGDFRAC 509
Query: 240 RLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL----- 282
+PLL ++++ YLDTTY NPKY FP + DV+ L
Sbjct: 510 PAHVKHPLLKPDIVDSISGKIKQQKIDICYLDTTYLNPKYSFPPQNDVIKACADLCGSMS 569
Query: 283 -TKNC--------------------------------LKKQP--KTLVVVGAYSIGKESV 307
NC KK+P + LV+ G YSIGKE +
Sbjct: 570 PDPNCKDDIWEKAGGQGTLAVSKFFPNTKYDENDKLDTKKKPPQRLLVICGTYSIGKERI 629
Query: 308 FLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYL 367
++I+KAL KI+A + ++ + D PELS L + + +H+ + ++ ETL++YL
Sbjct: 630 CISIAKALKSKIFATPGKIKICKQLDDPELSALLTSDPLEAQVHMQMLMEIRAETLQEYL 689
Query: 368 KPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRP-------------------------LS 402
Y ++ ++ RP+GW + G P
Sbjct: 690 NSYKPHFSRIVGLRPSGWNF-RPAGKSFGANTPPGSIHTQQILHDSNWRTRFGYKDFVPQ 748
Query: 403 RGNIT---IYGVPYSEHSSFTELREFV 426
RG+ +GVPYSEHSSF EL F+
Sbjct: 749 RGSTKEAMCFGVPYSEHSSFRELAMFL 775
>gi|63054513|ref|NP_593231.2| DNA 5' exonuclease (predicted) [Schizosaccharomyces pombe 972h-]
gi|19862928|sp|Q10264.3|PSO2_SCHPO RecName: Full=DNA cross-link repair protein pso2/snm1
gi|159883918|emb|CAA93588.2| DNA 5' exonuclease (predicted) [Schizosaccharomyces pombe]
Length = 560
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 186/339 (54%), Gaps = 27/339 (7%)
Query: 113 KKIVDRSC-PFYKKIP-GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIY 170
K+I RS PFYK +P PF VDAF YG+I G AYFL+HFH DHYGGL +W HGPIY
Sbjct: 175 KQINVRSVVPFYKLMPYNIPFAVDAFAYGAIDGVEAYFLSHFHSDHYGGLTPKWKHGPIY 234
Query: 171 CSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR-LQDGQC 229
CS +T L+ + V+ Y+ L+LN + I G+ V +L+ANHCPG+A+ F LQ Q
Sbjct: 235 CSEVTGNLLINVMHVDEQYVKRLKLNQPYNIMGITVYVLDANHCPGSAMFVFETLQSNQT 294
Query: 230 --YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL 287
LH GDFRAS+ +P+L ++ +YLDTTY NPKY FP + DV+ +
Sbjct: 295 RRVLHCGDFRASKDHVMHPVLREKTIHKVYLDTTYLNPKYTFPPQADVVQACADKAISIK 354
Query: 288 KK-QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
K + LVVV YSIGKE V +AI+K+L +IY + +++ + +L L
Sbjct: 355 KSTDSRLLVVVSTYSIGKEKVAVAIAKSLSSRIYVVPRKMHIIKQLENQDLIDLLTDDPT 414
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS------------------ 388
+H++ M + +L DYL+ Y + + ++ ++ TGWT+
Sbjct: 415 QASVHMVTMMGIHPNSLLDYLEQYNSSFDKIIGYKVTGWTFQPLENRAQLSSSLDSIISR 474
Query: 389 --ETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREF 425
+ V L IR S + + PYSEHSSF +L F
Sbjct: 475 PPKFVEYDLRAIRG-STDKVAAFVAPYSEHSSFYDLTMF 512
>gi|261203089|ref|XP_002628758.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis SLH14081]
gi|239586543|gb|EEQ69186.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis SLH14081]
Length = 845
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 189/398 (47%), Gaps = 85/398 (21%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K+ +R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL W HG IYCS
Sbjct: 398 KQAFERTCPFYKILPGFSICVDAFRYGAVEGCRAYFLSHFHSDHYIGLTSSWCHGQIYCS 457
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC 229
+T LVR L V+P +I ++ + I +G VT+L ANHCPG+++ F Q
Sbjct: 458 TVTGNLVRQQLKVDPKWITDIDFDKTFEIPQTNGAWVTMLPANHCPGSSIFLFEKQINTG 517
Query: 230 -------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
LH GDFRA +PLL ++V YLDTTY NPKY FP
Sbjct: 518 PKPRVHRILHCGDFRACPAHVQHPLLRPDVVDSLTGKVKQQLIDVCYLDTTYLNPKYAFP 577
Query: 271 SKE-----------------------------------------DVLNYVVRLTKNCLKK 289
+++ + RL K
Sbjct: 578 NQDDVVAACAAVCADLDPTQHGDSDDTTRGPTTTTVKTVMDLGFNAPQAPTRLRDANSKS 637
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
+ + LVV+G YSIGKE + +AI++AL KIYA A+++R+ + ELS L +
Sbjct: 638 RGRLLVVIGTYSIGKERLCMAIARALNCKIYAPAAKQRICACLEDAELSRLLTNNPIEAQ 697
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD------------- 396
+H+ + ++ ETL DYL ++ V+ FRPTGW Y G D
Sbjct: 698 VHMQTLMEVRAETLLDYLNSLKPHFSRVVGFRPTGWNYRPPAGRMTDSPPVSSILYSDSW 757
Query: 397 ---------LIRPLSRGNITIYGVPYSEHSSFTELREF 425
L + S T Y VPYSEHSSF EL F
Sbjct: 758 KPRFGTKDLLPQRGSNRQSTCYSVPYSEHSSFRELTMF 795
>gi|395326663|gb|EJF59070.1| DRMBL-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 496
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 191/388 (49%), Gaps = 79/388 (20%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I +AYFLTH H DHY L RW GPIYCS TA
Sbjct: 58 RKAPFYKVMQGMPIAVDAFRYGTIPNVTAYFLTHAHSDHYTNLSARWDSGPIYCSEGTAN 117
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR----LQDGQC- 229
L+ L V+P ++H L ++ I GV+VTL+EANHCPG+ L F + G
Sbjct: 118 LIIHMLGVDPKWVHALPMDVATTIPNTGGVQVTLIEANHCPGSCLFLFEGKQTVNAGDSA 177
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRAS +P + R++ YLDTTY +PKY FP + V+
Sbjct: 178 YKSSYVGSAKIFRYLHCGDFRASPQHVLHPAIKGKRIDHCYLDTTYLDPKYCFPPQPLVI 237
Query: 277 NYVVRLTKNCLK-----------KQPKT---------------------------LVVVG 298
+ L + ++ +P+T L+VVG
Sbjct: 238 SACAELARRLVQGKSVEDKAGGEAKPRTVTGWFTRVEKSEKGKEKEKAIASSEKILIVVG 297
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSL 358
YSIGKE + AI++AL K+Y + + +L+ PEL L T +H++P++ +
Sbjct: 298 TYSIGKERILKAIARALDTKVYCDPRKAAILRCQSDPELDALLTTDPFTAGVHLVPLAII 357
Query: 359 KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL------DLIRPLSR--------- 403
+ LK Y++ + ++ V+ FRPTGWT++ G + + R SR
Sbjct: 358 ASDRLKTYMERWKGHWSKVIGFRPTGWTFTAPNGTDMLPSIPTVISRSQSRTFTHANLQP 417
Query: 404 -----GNITIYGVPYSEHSSFTELREFV 426
+ +YGVPYSEHSSF EL F
Sbjct: 418 ARNSTAALQVYGVPYSEHSSFFELTCFA 445
>gi|388582449|gb|EIM22754.1| DRMBL-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 546
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 202/428 (47%), Gaps = 95/428 (22%)
Query: 94 SPPMKKLKASN--------------GKSTATHLKKIV--DRSCPFYKKIPGTPFTVDAFR 137
SPP KK K S ++TA K I R PFYK + G P VDAF
Sbjct: 66 SPPQKKAKLSAFNILMSSNNDTNAYNEATAMSSKSIPKNQRKTPFYKILEGMPIAVDAFM 125
Query: 138 YGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNT 197
G I G AY L+H H DHY L K W GPIYCS +TA LV V Y+ PL +T
Sbjct: 126 SGKIPGVEAYVLSHAHSDHYQSLSKNWDAGPIYCSIITASLVHHICGVPKEYLRPLSNDT 185
Query: 198 EHVI---DGVKVTLLEANHCPGAALIHFR----LQDGQC--------------YLHTGDF 236
HVI +GV VTL++ANHCPG+++ F + G YLH GDF
Sbjct: 186 AHVIPSTNGVTVTLIDANHCPGSSIFVFEGKQSVHAGDSNFKSPWIGSDRIFRYLHCGDF 245
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL-------------------- 276
RAS ++P + + + +YLDTTY NP Y FP + V+
Sbjct: 246 RASPQHVNHPAIKGKKFDAVYLDTTYLNPNYSFPPQRQVIDACRDLVLANLRGEMQVNES 305
Query: 277 ---------NYVVRLTKNCLKK-------QPKTLVVVGAYSIGKESVFLAISKALGVKIY 320
N VV KN ++ L+VVG YSIGKE + A++KA+ KI+
Sbjct: 306 MLDMLKSGFNRVVSSAKNQEEEEKEEKKISQDVLIVVGTYSIGKERIVKAVAKAINSKIF 365
Query: 321 ANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAF 380
A+ R+ +L++ EL+ L D+ +H+ + + TL DYL + +Y V+
Sbjct: 366 ADKRRQALLRNEKDEELNNLLTEDPYDSQVHIQGLGGVTINTLPDYLSKFKKKYNRVIGL 425
Query: 381 RPTGWTY--SETVGNQLD------LIRPLSRG--------------NITIYGVPYSEHSS 418
+PTGWTY + + ++LD L R L+R + YG+PYSEHSS
Sbjct: 426 KPTGWTYKNASSSSSELDINIEYLLKRDLNRSFTYRNLFSTRGSNDTVACYGIPYSEHSS 485
Query: 419 FTELREFV 426
FTEL F
Sbjct: 486 FTELTCFA 493
>gi|392578335|gb|EIW71463.1| hypothetical protein TREMEDRAFT_28150, partial [Tremella
mesenterica DSM 1558]
Length = 482
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 187/385 (48%), Gaps = 79/385 (20%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I +AY LTH H DHY L + W+HGPIYCS TA
Sbjct: 34 RPAPFYKVMTGMPVAVDAFRYGAIPKVTAYLLTHAHSDHYTNLSRSWNHGPIYCSETTAN 93
Query: 178 LVRMCLLVNPSYIH------PLELNTEHVIDGVKVTLLEANHCPGAALIHFR----LQDG 227
L+ L V P ++H P E+ GV VT +EANHCPG+++ F + G
Sbjct: 94 LIIHMLGVEPKWVHGLPNDIPFEMPN---TGGVTVTPMEANHCPGSSIFLFEGRQTVNAG 150
Query: 228 QC--------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKE 273
YLH GDFRA M +P + +++ YLDTTY NPKY FP +
Sbjct: 151 DSGFTSPYVGSKRVFRYLHCGDFRACPKMVLHPAIAKAKIDTCYLDTTYLNPKYCFPPQP 210
Query: 274 DVLNYVVRLTKNCL--------------------------------KKQPKTLVVVGAYS 301
V+ L + + K + +TLVV+G YS
Sbjct: 211 LVIEACATLARKTVRAALQEEKSKAMMQSWLVKREEPEGLEEVKEEKTKGRTLVVMGTYS 270
Query: 302 IGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFE 361
IGKE + A++KAL IY + ++ +L PEL L T +++H+LP+ +++ +
Sbjct: 271 IGKERIVKAVAKALRTTIYCDPRKKAILLCQTDPELHSLLSTDPVSSMVHLLPLGNIQLD 330
Query: 362 TLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL------DLIRPLSRG----------- 404
L++YL + VL FRPTGW+YS G L + R SRG
Sbjct: 331 RLQEYLTRLHPHFDRVLGFRPTGWSYSPPAGTDLLPDVNTVIRRDQSRGFTDAGLKPMRG 390
Query: 405 ---NITIYGVPYSEHSSFTELREFV 426
+YGVPYSEHSSF EL F
Sbjct: 391 SCRQYMMYGVPYSEHSSFFELTCFA 415
>gi|327349624|gb|EGE78481.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis ATCC 18188]
Length = 845
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 192/399 (48%), Gaps = 87/399 (21%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K+ +R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL W HG IYCS
Sbjct: 398 KQAFERTCPFYKILPGFSICVDAFRYGAVEGCRAYFLSHFHSDHYIGLTSSWCHGQIYCS 457
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC 229
+T LVR L V+P +I ++ + I +G VT+L ANHCPG+++ F Q
Sbjct: 458 TVTGNLVRQQLKVDPKWITDIDFDKTFEIPQTNGAWVTMLPANHCPGSSIFLFEKQVNTG 517
Query: 230 -------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
LH GDFRA +PLL ++V YLDTTY NPKY FP
Sbjct: 518 PKPRVHRILHCGDFRACPAHVQHPLLRPDVVDSLTGKVKQQLIDVCYLDTTYLNPKYAFP 577
Query: 271 SKE-----------------------------------------DVLNYVVRLTKNCLKK 289
+++ + RL K
Sbjct: 578 NQDDVVAACAAVCADLDPTQHGDSDDTTRGPTTTTVKTVMDLGFNAPQAPTRLRDANSKS 637
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
+ + LVV+G YSIGKE + +AI++AL KIYA A+++R+ + ELS L +
Sbjct: 638 RGRLLVVIGTYSIGKERLCMAIARALNCKIYAPAAKQRICACLEDAELSRLLTNNPIEAQ 697
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS------- 402
+H+ + ++ ETL DYL ++ V+ FRPTGW Y G D P+S
Sbjct: 698 VHMQTLMEVRAETLLDYLNSLKPHFSRVVGFRPTGWNYRPPAGRMTDSP-PVSSVLYSDS 756
Query: 403 -------------RGN---ITIYGVPYSEHSSFTELREF 425
RG+ T Y VPYSEHSSF EL F
Sbjct: 757 WKPRFGTKDLIPQRGSNRQSTCYSVPYSEHSSFRELTMF 795
>gi|328876594|gb|EGG24957.1| DNA repair metallo-beta-lactamase domain-containing protein
[Dictyostelium fasciculatum]
Length = 922
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 180/300 (60%), Gaps = 12/300 (4%)
Query: 123 YKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMC 182
+K I GT F VD F+Y S K + YFLTHFH DHY GL K +S G +YC+ T +LV
Sbjct: 291 FKVIHGTKFLVDGFQYKS-KEYTHYFLTHFHSDHYVGLTKTFSFGNVYCTEETGKLVHSK 349
Query: 183 LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLM 242
L V P++I + N I+GV+V +L+ANHCPG+A+I F + + + LHTGDFR M
Sbjct: 350 LGVQPNFIKAMPWNRFITIEGVRVAMLDANHCPGSAMILFHV-NNEYSLHTGDFRYHHRM 408
Query: 243 QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302
+ YPLL + ++ LYLD T+C+P Y FP +++V+ VV++ + + +T+ + G Y+I
Sbjct: 409 KEYPLLKDIAISRLYLDNTFCDPTYVFPPQQEVIQEVVKIIQK--ENDGRTVFLFGTYTI 466
Query: 303 GKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFET 362
GKE + + +SK KI + +++++ D + T T H +PM +L+F++
Sbjct: 467 GKERILMEVSKNQRKKICVSQDKKQIIACLDLDQTM--FTTDETITPFHAVPMGTLRFDS 524
Query: 363 LKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTEL 422
L+ L+ +Y V+AFRPTGWT S+ I G +T+Y V YSEHSS+ EL
Sbjct: 525 LRGRLEALKPRYGRVVAFRPTGWTQSKKS------ITHQRYGAVTLYSVAYSEHSSYNEL 578
>gi|320591532|gb|EFX03971.1| DNA repair protein pso2 [Grosmannia clavigera kw1407]
Length = 883
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 202/436 (46%), Gaps = 124/436 (28%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
++ +R+CPFYK +PG VDAFRYG ++GC AYFL+HFH DHY GL +WSHGPIYCS
Sbjct: 375 RQSYERTCPFYKIMPGFFICVDAFRYGPVEGCRAYFLSHFHSDHYVGLTAKWSHGPIYCS 434
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHF--RLQ 225
+T+ LV+ L ++ +E E +D GV+VT++ ANHCPG++L F L
Sbjct: 435 KVTSSLVKTQLGTAAKWVVAIEY--EQTVDVPGTGGVQVTMIPANHCPGSSLFLFTKTLP 492
Query: 226 DG--QCYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPS 271
+G Q LH GDFRA + LL +++V YLDTTY NP+Y FP
Sbjct: 493 NGRTQRILHCGDFRACPAHVQHSLLRPETLDAVTGKTRQQKIDVCYLDTTYLNPRYSFPP 552
Query: 272 KEDVLNYVVRL------------------------------------------------- 282
+ DV+ L
Sbjct: 553 QNDVIGACASLCAALDRSLRSGTDDEWDRLLGRPKNRSGGAGSFFVRGGAEPKPSPAAGV 612
Query: 283 ---TKNCL----KKQPKT---LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
T N L K PK LVV G YSIGKE + +AI++ALG KIYA+ ++ R++Q
Sbjct: 613 PASTTNALSILGKPAPKGSRLLVVCGTYSIGKERICVAIAQALGSKIYASPAKIRIMQQL 672
Query: 333 DWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG 392
D PEL+ + + + +H+ + ++ ETL Y + Y ++ ++ FRP+GW Y ++
Sbjct: 673 DDPELAALMTSNPAEAQVHMQMLMEMRAETLATYHETYSAHFSRIVGFRPSGWNYRPSMA 732
Query: 393 NQLDLIRPL---------------------------------------SRGNI---TIYG 410
N R RG+ +G
Sbjct: 733 NNETKARDGSSGAAVAAGAGLAPGSLTTTTLLHGAGWRTRFGMRDLLPQRGSTREAMCFG 792
Query: 411 VPYSEHSSFTELREFV 426
VPYSEHSSF EL FV
Sbjct: 793 VPYSEHSSFRELALFV 808
>gi|390600201|gb|EIN09596.1| DRMBL-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 486
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 190/397 (47%), Gaps = 88/397 (22%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYGSI G +AYFLTH H DHY L W GPIYCS T +
Sbjct: 33 RKAPFYKVMQGMPIAVDAFRYGSIPGVTAYFLTHAHSDHYTNLSSSWRSGPIYCSECTGK 92
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR----LQDGQC- 229
L+ L V+ ++H L + E I GVKVTLL+ANHCPG+ L F + G
Sbjct: 93 LIIHMLGVDRKWVHFLPFDQETTIPNTGGVKVTLLDANHCPGSCLFLFEGPQTVNAGDSN 152
Query: 230 ----------------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
YLH GDFRAS ++P + +++V+YLDTTY + KY
Sbjct: 153 YNSPFVPSNSTFKATKQARMFRYLHCGDFRASPRHVNHPAVKGKKIDVVYLDTTYLDLKY 212
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQP------------------------------------ 291
FP ++ V++ L + + +P
Sbjct: 213 CFPPQKLVIDACAELARRKVFGEPDQSTSEKFKAGLGMVTSWVTVQPKRENDGTHVPKAG 272
Query: 292 --KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
+ LV+VG YSIGKE V AI+KAL K+Y +A + +L+ EL L D
Sbjct: 273 ENRILVIVGTYSIGKERVVKAIAKALSSKVYCDARKAAILRCQADSELESLLTKDPLDAT 332
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL-------------- 395
+H++P+ + + LKDY+ + ++ +AFRPTGWT++ G L
Sbjct: 333 VHLVPLGMVSSDRLKDYVARWKGAFSRAIAFRPTGWTFTAPAGTDLAPPIPTVISRSQSR 392
Query: 396 ----DLIRPL--SRGNITIYGVPYSEHSSFTELREFV 426
RP+ S + +YGVPYSEHSSF EL F
Sbjct: 393 TFDYTHFRPMRNSTPTLQLYGVPYSEHSSFFELTCFA 429
>gi|239608422|gb|EEQ85409.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis ER-3]
Length = 845
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 192/399 (48%), Gaps = 87/399 (21%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K+ +R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL W HG IYCS
Sbjct: 398 KQAFERTCPFYKILPGFSICVDAFRYGAVEGCRAYFLSHFHSDHYIGLTSSWCHGQIYCS 457
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC 229
+T LVR L V+P +I ++ + I +G VT+L ANHCPG+++ F Q
Sbjct: 458 TVTGNLVRQQLKVDPKWITDIDFDKTFEIPQTNGAWVTMLPANHCPGSSIFLFEKQVNTG 517
Query: 230 -------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
LH GDFRA +PLL ++V YLDTTY +PKY FP
Sbjct: 518 PKPRVHRILHCGDFRACPAHVQHPLLRPDVVDSLTGKVKQQLIDVCYLDTTYLSPKYAFP 577
Query: 271 SKE-----------------------------------------DVLNYVVRLTKNCLKK 289
+++ + RL K
Sbjct: 578 NQDDVVAACAAVCADLDPTQHGDSDDTTRGPTTTTVKTVMDLGFNAPQAPTRLRDANSKS 637
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
+ + LVV+G YSIGKE + +AI++AL KIYA A+++R+ + ELS L +
Sbjct: 638 RGRLLVVIGTYSIGKERLCMAIARALNCKIYAPAAKQRICACLEDAELSRLLTNNPIEAQ 697
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS------- 402
+H+ + ++ ETL DYL ++ V+ FRPTGW Y G D P+S
Sbjct: 698 VHMQTLMEVRAETLLDYLNSLKPHFSRVVGFRPTGWNYRPPAGRMTDSP-PVSSVLYSDS 756
Query: 403 -------------RGN---ITIYGVPYSEHSSFTELREF 425
RG+ T Y VPYSEHSSF EL F
Sbjct: 757 WKPRFGTKDLIPQRGSNRQSTCYSVPYSEHSSFRELTMF 795
>gi|449548339|gb|EMD39306.1| hypothetical protein CERSUDRAFT_47253 [Ceriporiopsis subvermispora
B]
Length = 505
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 184/385 (47%), Gaps = 76/385 (19%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYGSI +AYFLTH H DHY L W GPIYCS T
Sbjct: 71 RHAPFYKVLQGMPIAVDAFRYGSIPEITAYFLTHAHSDHYTNLSSNWRSGPIYCSEGTGN 130
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR----LQDGQC- 229
L+ L V+ ++ PL ++ ++ GV VTL+EANHCPG+ L F + G
Sbjct: 131 LIVHMLGVDRKWVRPLPMDVPTIVPDTGGVSVTLIEANHCPGSCLFLFEGPQTVNAGDSA 190
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRAS +P + R++ +YLDTTY +PKY FP + V+
Sbjct: 191 YKSPFVGTKRIFRYLHCGDFRASPQHVLHPCVKGKRLDHVYLDTTYLDPKYCFPPQPQVI 250
Query: 277 NYVVRLTKNCLKKQP---------------------------------KTLVVVGAYSIG 303
L + ++ + + L +VG YSIG
Sbjct: 251 AACAELARRIVRGESLEDGDLKGKKRETMDGWITVHEKAYKKEESAAGRVLFIVGTYSIG 310
Query: 304 KESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETL 363
KE + AI++ALG KI+ ++ + +L+ PEL L + +H++P+ + + L
Sbjct: 311 KERIVKAIARALGTKIFCDSRKEAILRCEADPELDALLTRDPLEGAVHLVPLGVIASDRL 370
Query: 364 KDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI--------------------RPL-- 401
KDY+ + Y+ + FRPTGWTY+ G I RP
Sbjct: 371 KDYIGRFKGHYSRAVGFRPTGWTYTPPSGTDTTNIPSIPALIKRAQSRTYTFANLRPTKN 430
Query: 402 SRGNITIYGVPYSEHSSFTELREFV 426
S + +YGVPYSEHSSF EL F
Sbjct: 431 SSPGLQVYGVPYSEHSSFVELSAFA 455
>gi|256075515|ref|XP_002574064.1| DNA cross-link repair protein pso2/snm1 [Schistosoma mansoni]
gi|360043082|emb|CCD78494.1| putative dna cross-link repair protein pso2/snm1 [Schistosoma
mansoni]
Length = 431
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 195/354 (55%), Gaps = 52/354 (14%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R CPFYK IP T TVDAF Y I GC+ YFL+HFH+DH+ G+ K + G IYCS +T
Sbjct: 56 RKCPFYKWIPDTSITVDAFCYAEIPGCTCYFLSHFHFDHFRGIHKNFK-GDIYCSEVTKN 114
Query: 178 LVRMC----LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQ-CYLH 232
L+R L++N LE+ I V+VT L+ANHCPG+ + F + Q YLH
Sbjct: 115 LLRDAYGSGLVIN-----VLEIEKSTKIGNVEVTALDANHCPGSLMFLFYVPSKQRTYLH 169
Query: 233 TGDFRASRLMQSYP-LLVNH-----------RVNVLYLDTTYCNPKYKFPSKEDVLNYVV 280
TGDFR + M ++P +L N+ R++ ++LDTTYC+ +Y FP++ DV++ +
Sbjct: 170 TGDFRYTPSMLTHPSILTNYISDNSASKKLPRIHSIFLDTTYCSSQYDFPNQVDVIHGAL 229
Query: 281 RLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW------ 334
+T++ L K P LVV G YSIGKE L ++ L +K++ ++ R+++
Sbjct: 230 EVTRDYLIKDPTILVVCGMYSIGKERFTLGLASELNLKVWLPNNQNRLIKLAAQGGCSVC 289
Query: 335 PELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYA--------------AVLAF 380
EL + + LHVLPM L L Y K GN+ ++L +
Sbjct: 290 KELLQYVVDSSHKAQLHVLPMQQLNVAGLVQYQKKLGNRLPIDPFHNSPTFPKLRSILGW 349
Query: 381 RPTGWTYSETVGNQLDLIRP--------LSRGNITIYGVPYSEHSSFTELREFV 426
RPTGW++ ++ N IRP +G+I IYG PYSEHSSF EL++F+
Sbjct: 350 RPTGWSHRQS-NNAQSSIRPPPNGIVLEQKKGDIHIYGAPYSEHSSFLELKQFI 402
>gi|402073709|gb|EJT69261.1| DNA cross-link repair protein SNM1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 893
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 217/477 (45%), Gaps = 127/477 (26%)
Query: 72 QANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTA----------THLKKIVDRSCP 121
QAN + G S +C KL +S + TA + K+ +R+CP
Sbjct: 332 QANPISLGGA-----SPVSCTKVSAFSKLMSSRAEDTAWATAAASEHASRGKQAYERTCP 386
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRM 181
FYK +PG VDAFRYG+++GC AYFL+HFH DHY GL +W+HGPIYCS +T L++
Sbjct: 387 FYKIMPGLSICVDAFRYGAVEGCKAYFLSHFHSDHYIGLTAKWAHGPIYCSKVTGSLIKS 446
Query: 182 CLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHF------RLQDG---QC 229
L Y+ L+ V+ +GV VT++ ANHCPG++L F R D Q
Sbjct: 447 QLRTAAQYVVELDFEERFVVPDTNGVAVTMIPANHCPGSSLFLFEKTTPGRPGDRPRIQR 506
Query: 230 YLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFPSKED--- 274
LH GDFRA + LL +++V YLDTTY NP+Y FP ++D
Sbjct: 507 ILHCGDFRACPAHSDHALLRPRITDAVSGKIRTQKIDVCYLDTTYLNPRYSFPPQDDVIR 566
Query: 275 -------VLNYVVR-----LTKNCLKKQP------------------------------- 291
LN +R + + L+++P
Sbjct: 567 SCAELCAALNRGLREKNDAVWADILRRRPGNPIGETLNRFFASGDSTTSPSRANGQSTND 626
Query: 292 ---------------KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
+ LVV G YSIGKE + AI++AL KI+A+ ++ R++ PE
Sbjct: 627 GDPSNALSTLIDPRSRLLVVCGTYSIGKERICKAIAQALRTKIFASPAKIRIIGQLGDPE 686
Query: 337 LSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD 396
L+ + ++ + +H+ ++ ++ ETL DYL + + V+ FRP+GW Y
Sbjct: 687 LAALMTSKPAEAQVHMQALAEIRAETLADYLATHRAHFGRVIGFRPSGWNYRPAGAAANA 746
Query: 397 LIRPLS------------------------RGNIT---IYGVPYSEHSSFTELREFV 426
+P S RG+ +GVPYSEHSSF EL F+
Sbjct: 747 AAQPSSVATTSLLHGGAWRPAYTSRHLAPQRGSTAEAMCFGVPYSEHSSFRELALFL 803
>gi|303284621|ref|XP_003061601.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456931|gb|EEH54231.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 698
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 194/348 (55%), Gaps = 16/348 (4%)
Query: 94 SPPMKKLKASNGKSTATHLKKIVD--RSCPFYKKIPGTPFTVDAFR-YGSIKG--CSAYF 148
+PP K+ K S++ ++ P + ++PGT F VD FR YG C +F
Sbjct: 309 APPSKRRKDRPRPSSSRYVPAAAQDLPPPPPWIRVPGTTFIVDGFRGYGKSHSGWCKNWF 368
Query: 149 LTHFHYDHYGGLGKRW-SHG-PIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKV 206
LTHFH DHY GL + S G ++CS TARL ++ L ++ S + +++ + +++GVK
Sbjct: 369 LTHFHADHYAGLTRSTPSEGCVVWCSRPTARLCQLRLGISKSRLRAVDVGRDFIVEGVKC 428
Query: 207 TLLEANHCPGAALIHFR--LQDGQCYLHTGD--FRASRLMQSYPLLVNHRVNVLYLDTTY 262
+ ANHCPGA +I F G L TGD F AS + L + R + LDTTY
Sbjct: 429 RFVHANHCPGAVMIVFDDIPGGGGPVLATGDCRFHASMTLDPGLLRIQERRPAVMLDTTY 488
Query: 263 CNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
C+PK+ FP +E+VL V K PK L + G Y+IGKE VF +KALG K+Y
Sbjct: 489 CDPKHAFPPQEEVLKAVAVAVK-AENFNPKCLFLFGTYTIGKERVFFEAAKALGKKVYVG 547
Query: 323 ASRRRVLQSF-DWPELS--GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLA 379
+R+VL + D + + ++ T +T LHV+PM S F +K L+ Y N+Y V+A
Sbjct: 548 KQKRQVLDALGDAIDKTYMDSVTTDDTETNLHVVPMGSTSFARMKTILRYYKNRYDTVIA 607
Query: 380 FRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
F+PTGWT+ E + RG++ Y +PYSEHSSFTELR F++
Sbjct: 608 FKPTGWTF-EKAAKTARATKRTQRGSLIQYALPYSEHSSFTELRAFMR 654
>gi|403420266|emb|CCM06966.1| predicted protein [Fibroporia radiculosa]
Length = 810
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 186/377 (49%), Gaps = 68/377 (18%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I G SAYFLTH H DHY L W GPIYCS TA
Sbjct: 383 RKAPFYKIMQGMPIAVDAFRYGTIPGISAYFLTHAHSDHYTNLSANWRSGPIYCSEGTAN 442
Query: 178 LVRMCLLVNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFR----LQDGQC- 229
L+ L V+P ++H L ++ +I GV+VTL+EANHCPG+ L F + G
Sbjct: 443 LIIHMLGVDPQWVHALPMDVATIIPQTGGVQVTLIEANHCPGSCLFLFEGPQTVNAGDSA 502
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPK---YKFPSKE 273
YLH GDFRAS ++P + ++ +YLDTTY +PK + E
Sbjct: 503 FKSSFVGSSKTFRYLHCGDFRASPRHVNHPSVKGKLLDHVYLDTTYLDPKASCFITACAE 562
Query: 274 DVLNYVV--------------RLTKNCL----------KKQPKTLVVVGAYSIGKESVFL 309
VV R + L K + LVVVG YSIGKE +
Sbjct: 563 LARRLVVGQSLHDVGDNSKGKRTMDSWLTSPEKEGANYSKPGRVLVVVGTYSIGKERIVK 622
Query: 310 AISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKP 369
AI+ AL KIY ++ + +L+ PEL L + +H++P+S + + LKDY++
Sbjct: 623 AIAHALQTKIYCDSRKAALLRCQADPELDALLTKDPMEGGVHLVPLSVIASDRLKDYVER 682
Query: 370 YGNQYAAVLAFRPTGWTYSETVGNQLD------LIRPLSR--------------GNITIY 409
Y Y + FRPTGWT+S G + + R SR + IY
Sbjct: 683 YKGHYHKAVGFRPTGWTFSAPAGTDVSPAVATVISRSQSRNFTHTHLNPMKNSTAALQIY 742
Query: 410 GVPYSEHSSFTELREFV 426
GVPYSEHSSF EL F
Sbjct: 743 GVPYSEHSSFFELTCFA 759
>gi|66817282|ref|XP_642494.1| DNA repair metallo-beta-lactamase domain-containing protein
[Dictyostelium discoideum AX4]
gi|74861596|sp|Q86KS1.1|DCR1_DICDI RecName: Full=DNA cross-link repair 1 protein
gi|60470572|gb|EAL68551.1| DNA repair metallo-beta-lactamase domain-containing protein
[Dictyostelium discoideum AX4]
Length = 920
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 178/330 (53%), Gaps = 22/330 (6%)
Query: 106 KSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS 165
+ T T KKI P +K I GT F VD F+Y S + + YFLTHFH DHY G+ K WS
Sbjct: 250 RKTPTKEKKIP----PSFKVIDGTNFLVDGFQYKS-EDFTHYFLTHFHSDHYVGITKTWS 304
Query: 166 HGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHF--- 222
G IYC+ T +LV L V+ YI E N I GVKV L++NHCPG+ALI F
Sbjct: 305 FGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIP 364
Query: 223 -RLQDG-----QCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
R +DG + LHTGDFR ++ M +YPLL ++ LYLD TYC+P+Y FP + +++
Sbjct: 365 LRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEII 424
Query: 277 NYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
V + + + +TL + G Y IGKE + L I+K G ++ + + +L
Sbjct: 425 KQVASIVRK--ENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCL 482
Query: 337 LSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD 396
T T + MS L + + L N+Y V+ FRPTGWT ++
Sbjct: 483 DINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKS----- 537
Query: 397 LIRPLSRGNITIYGVPYSEHSSFTELREFV 426
I L+RG T Y V YSEHSSF ELR+ +
Sbjct: 538 -ITYLNRGPTTFYSVAYSEHSSFNELRDCI 566
>gi|384251897|gb|EIE25374.1| DRMBL-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 363
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 175/308 (56%), Gaps = 4/308 (1%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKG-CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
P ++K+PG PF VD F G+ K C ++FLTHFH DHY GL ++ G IYC+ +TA+LV
Sbjct: 27 PPWQKMPGLPFLVDRFGKGTEKAACKSWFLTHFHSDHYKGLTSKFKAGVIYCTLITAKLV 86
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
L V + ++LN +++GV+VT ++ANHCPGAA+I F +HTGD R
Sbjct: 87 HQRLKVPWERLRVVQLNAAQLVEGVRVTFVDANHCPGAAMIVFEPPGRAPIVHTGDCRYH 146
Query: 240 RLMQSYPLLVNHRVNV-LYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
MQ LV R L LDTTYC +Y FP + VL +V+ + P TL + G
Sbjct: 147 VGMQQERALVAVRGRATLILDTTYCAAQYNFPPQLQVLQFVLEAVR-AEAFNPATLFLFG 205
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSL 358
+Y+IGKE +FL +++ L K+Y + S+R VL + P L T + LH +P+ +
Sbjct: 206 SYTIGKERLFLEVARILQRKVYVSVSKRAVLDTLGLPPEYETLLTTDDRARLHAVPLWRV 265
Query: 359 KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSS 418
+ + LK Y +Y ++ F+PTGW+ G + R +G + +Y VPYSEHSS
Sbjct: 266 SLKHMARTLKHYRGRYTTIVGFQPTGWSMHSGKG-RAPRGRRRQKGTLIVYSVPYSEHSS 324
Query: 419 FTELREFV 426
ELR+ V
Sbjct: 325 HQELRQMV 332
>gi|237838189|ref|XP_002368392.1| DNA cross-link repair protein, putative [Toxoplasma gondii ME49]
gi|211966056|gb|EEB01252.1| DNA cross-link repair protein, putative [Toxoplasma gondii ME49]
gi|221484335|gb|EEE22631.1| SNM1 protein, putative [Toxoplasma gondii GT1]
gi|221505686|gb|EEE31331.1| SNM1 protein, putative [Toxoplasma gondii VEG]
Length = 404
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 183/329 (55%), Gaps = 36/329 (10%)
Query: 102 ASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG 161
AS + + H+ IV + P VD FR KG +FL+HFH DHY GL
Sbjct: 2 ASVSIAASRHVSHIVPETEPL--------VLVDTFRKVP-KGSFVFFLSHFHADHYSGLS 52
Query: 162 KRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIH 221
WS G +YCS LTARL+ L VN + + L+L+TE+ I +VTLL+ANHCPGA +
Sbjct: 53 SSWSRGVVYCSVLTARLIITFLRVNKALVRGLDLDTEYEIADARVTLLDANHCPGAVMFL 112
Query: 222 FRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVR 281
+ + G+ YLHTGDFR R M +P L N ++ ++LDTTY P+Y+F + D + V
Sbjct: 113 CKTKGGKTYLHTGDFRYDRHMVDHPALANCHIDTVFLDTTYGRPEYEFEPQVDTIQRAVN 172
Query: 282 LTKNCLK--KQP-KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPEL- 337
+ + K KQP + L +VG+Y+IGKE + LA+S+ G ++A+ RRR+L +L
Sbjct: 173 VAEEVCKESKQPGRVLFLVGSYTIGKEKIALALSETFGWTVFASGKRRRILDCLQLEQLR 232
Query: 338 SGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL 397
G L +H++PM++ +AF PTGW+++ +
Sbjct: 233 DGGLGDDPATCCIHIVPMNT--------------------IAFLPTGWSFTSKWNKEHS- 271
Query: 398 IRPLSRGNITIYGVPYSEHSSFTELREFV 426
+S G IT++ + YSEHSS+TEL+EFV
Sbjct: 272 --SMSSGCITVHLLEYSEHSSYTELKEFV 298
>gi|255574286|ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis]
gi|223532518|gb|EEF34307.1| DNA ligase I, putative [Ricinus communis]
Length = 1360
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 186/321 (57%), Gaps = 26/321 (8%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K IP T F +DAFR+ + +AYFLTHFH DHY GL WS G I+CS +TA LV L
Sbjct: 49 KHIPKTRFLIDAFRFST--AAAAYFLTHFHSDHYSGLSSNWSQGMIFCSQITANLVTRIL 106
Query: 184 LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDG---QCYLHTGDFRASR 240
V +++PL LN +IDG ++TL++ANHCPGA + F+++ + Y+HTGDFR SR
Sbjct: 107 NVPSQFVYPLPLNDTVIIDGSEITLIDANHCPGAVQLLFKVRSSGTFEMYVHTGDFRYSR 166
Query: 241 LMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVV----RLTKNCLKKQPKTLV 295
M+ +L + + ++LDTTYCNPK+ FP +++ ++YVV R+ + + L
Sbjct: 167 EMKEVGILRDFVGCDAVFLDTTYCNPKFVFPKQQESIDYVVSVIERIGGDFQAMSKRVLF 226
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
+V Y +GKE + + I+K K++ + + VL+ + E SG + +HV+
Sbjct: 227 LVATYVVGKERILIEIAKRCRRKVHVDRRKMEVLRVLGYGE-SGVFTEDEGQSDVHVVGW 285
Query: 356 SSL---------KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNI 406
+ L F +K+ + G Y+ ++ F PTGWTY E N+ + S+ +
Sbjct: 286 NVLGETWPYFRPNFANMKEIMVERG--YSRIVGFVPTGWTY-EVKHNKFSV---RSKDSF 339
Query: 407 TIYGVPYSEHSSFTELREFVQ 427
I+ VPYSEHS++ ELRE+V+
Sbjct: 340 EIHLVPYSEHSNYDELREYVK 360
>gi|83770372|dbj|BAE60505.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391866780|gb|EIT76048.1| putative hydrolase involved in interstrand cross-link repair
[Aspergillus oryzae 3.042]
Length = 773
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 175/355 (49%), Gaps = 72/355 (20%)
Query: 99 KLKASNGKSTA----------THLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYF 148
KL A N + TA + K+ R+CPFYK IPG VDAFRYG+++GC+AYF
Sbjct: 391 KLMAGNAEDTAWTAAAASEVKSKGKQAYQRTCPFYKIIPGFSICVDAFRYGAVEGCNAYF 450
Query: 149 LTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLEL--NTEHVIDGVKV 206
L+H+H DHY GL W HGPIYCS T LVR L V+P ++ LE TE GV+V
Sbjct: 451 LSHYHSDHYIGLTASWRHGPIYCSKATGNLVRQQLKVDPRWVVDLEFEKTTEVPNTGVQV 510
Query: 207 TLLEANHCPGAALIHFRLQDG-------QCYLHTGDFRASRLMQSYPLL----------- 248
TL+EANHCPG+A+ F G Q LH GDFRAS + LL
Sbjct: 511 TLIEANHCPGSAIFLFEKAMGSGQSKRIQRVLHCGDFRASPTHVQHALLRPEIVDSVTGQ 570
Query: 249 -VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL------------------------- 282
R++V YLDTTY +PKY FPS+ DV+ L
Sbjct: 571 KRQQRIDVCYLDTTYLSPKYSFPSQIDVIEACAELCASLDRGEDEGPAPWQSGKASKEGG 630
Query: 283 ----------------TKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRR 326
+ + Q + LVV+G YSIGKE + LAI++AL KIYA A ++
Sbjct: 631 GIMSKFFNSVTGSGKSQERSSRPQGRLLVVIGTYSIGKERICLAIARALKSKIYATAGKQ 690
Query: 327 RVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFR 381
RV + ELS L + +H+ + ++ ETL DYL + VL +
Sbjct: 691 RVCACLEDAELSSLLTDDPVEAQVHMQTLFEIRAETLADYLDSMKPHFTRVLGSK 745
>gi|384487503|gb|EIE79683.1| hypothetical protein RO3G_04388 [Rhizopus delemar RA 99-880]
Length = 410
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/351 (38%), Positives = 187/351 (53%), Gaps = 52/351 (14%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNP 187
GT VDAF +G I C YFL+HFH DHY L W+HGPIYCS +T+RLV+ L V
Sbjct: 12 GTNLVVDAFSFGRIPECEGYFLSHFHGDHYTNLNAGWTHGPIYCSEITSRLVQKKLRVPS 71
Query: 188 SYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC----YLHTGDFRASR 240
++I PL LN +I D V VTL++ANHCPGA + + YLHTGDFRA +
Sbjct: 72 NFIRPLPLNRSCLIPGTDNVSVTLIDANHCPGAVMFLCVVPQTDSPPLRYLHTGDFRACK 131
Query: 241 LMQSYPLLV---NHRVNVLYLDTTYCNPKYKFPSKE-------DV--------------- 275
M +PLL N +++LYLDTTY + KY FPS+ DV
Sbjct: 132 EMCLHPLLKQPENPPIDILYLDTTYLDHKYSFPSQTTCIQLACDVVERHINHNGDNQLSN 191
Query: 276 LNYVVRLTKNCLKKQ--PKTLVVVGAYSIGKESVF---LAISKALGVKIYANASRRRVLQ 330
+++++ K K+ KT+VVVG YS+GKE +F L I+K L KI+ + +L
Sbjct: 192 MDHLLTQKKELKNKKIIQKTVVVVGTYSLGKERIFIISLGIAKKLKSKIFVTDRKMEILS 251
Query: 331 SFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSET 390
F EL L + + +HV+P+ + E L+ Y++ + ++AF+PTGWT+ +
Sbjct: 252 CFGDDELMKMLTDEPKEAQVHVIPLGHILPENLEAYIRSLQPHFTQMVAFKPTGWTFRTS 311
Query: 391 VGNQ---LDLIRPLSRGNIT------------IYGVPYSEHSSFTELREFV 426
Q LD I ++T IY +PYSEHSSF EL F+
Sbjct: 312 SLEQDRSLDAIISAGAADMTVLKSSYESLTLKIYEIPYSEHSSFRELALFI 362
>gi|308809045|ref|XP_003081832.1| putative SNM1 (ISS) [Ostreococcus tauri]
gi|116060299|emb|CAL55635.1| putative SNM1 (ISS), partial [Ostreococcus tauri]
Length = 374
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 179/321 (55%), Gaps = 13/321 (4%)
Query: 119 SCPFYKKIPGTPFTVDAFRY--GSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
S P + + PGT F VD F + G C +FLTHFH DH+ GL K + G IY + T
Sbjct: 9 SAPCWIRPPGTRFIVDGFEWDLGRGGACETWFLTHFHADHHRGLTKTFDKGIIYGTKETL 68
Query: 177 RLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL---QDGQCYLHT 233
LVRM + V + LE+ +DGV+VT ++ANHCPGA +I F D LHT
Sbjct: 69 ELVRMKIQVPALRLRALEIGVPARVDGVQVTFIDANHCPGAVMILFEFPERPDASPVLHT 128
Query: 234 GDFR-ASRLMQSYPLL---VNHRVNVLYLDTTYCNPKY-KFPSKEDVLNYVVR-LTKNCL 287
GDFR ++RL + L+ + + +L LDTTYC+ ++ FP++E VLN V LT
Sbjct: 129 GDFRFSARLARDETLVRIAASPKRPILILDTTYCSLEHDAFPTQEYVLNAVREALTHEDN 188
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND 347
+ L + G Y++GKE VF ++ LG K+Y A++R VL + T+ +
Sbjct: 189 LDGARKLFLFGTYTVGKEKVFFEAARTLGRKVYVGAAKRSVLDALSLTRDEREALTRDDK 248
Query: 348 -TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNI 406
T LHV+PM S F + LK Y +++ V+AFRPTGWT+S R RG +
Sbjct: 249 RTNLHVVPMGSTSFSKMASILKYYKSRFDTVVAFRPTGWTFSANKKTSRASSR-RQRGRL 307
Query: 407 TIYGVPYSEHSSFTELREFVQ 427
YG+PYSEHSS +ELR F++
Sbjct: 308 VQYGLPYSEHSSLSELRAFIR 328
>gi|384500579|gb|EIE91070.1| hypothetical protein RO3G_15781 [Rhizopus delemar RA 99-880]
Length = 417
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 150/444 (33%), Positives = 207/444 (46%), Gaps = 120/444 (27%)
Query: 39 DEEEEEKEESFADDFYRC-GTDWSCLLQTERKLKQANLFDMWGLKSNSESEANCLFSPPM 97
D E++KE ++ R + W L +K+ D+ K+ + +A L
Sbjct: 23 DTNEKDKENKNDEELRRVLPSSWKSLFSCNTPIKK----DILAPKNTNSFKAKAL----- 73
Query: 98 KKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHY 157
KS K++ ++CPFYK++ T F VDAF YG I GC YFL+HFH DHY
Sbjct: 74 -------NKS-----KQVKVKTCPFYKRVKDTQFVVDAFNYGDIPGCDGYFLSHFHTDHY 121
Query: 158 GGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI--DGVKVTLLEANHCP 215
GGL WSHGPIYCS +TA L++ L V+P +IHPL ++ + I VKV L++ANHCP
Sbjct: 122 GGLRSNWSHGPIYCSQVTANLIKQELKVDPRFIHPLPMDELYPIPQSNVKVALIDANHCP 181
Query: 216 GAALIHFRLQDGQC----YLHTGDFRASRLMQSYPLLV---NHRVNVLYLDTTYCNPKYK 268
G+ L F ++ +LHTGDFRA+ M +PL+ N + LYLDTTY NP+Y
Sbjct: 182 GSVLFLFVVERADKTVVRHLHTGDFRAAPRMCLHPLVRQPDNPSIQCLYLDTTYLNPQYA 241
Query: 269 FPSKEDVLNYVV-RLTKNCLKK----------------------QPK----TLVVVGAYS 301
FP++E+ + V + K LK QPK TL+VVG Y+
Sbjct: 242 FPAQEECIQAVCDTIEKEILKDKKKNTLNGWLAQTGTNAFNMLMQPKPKKQTLIVVGTYT 301
Query: 302 IGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFE 361
+GKE VF K L I N S +V HV+ + ++ +
Sbjct: 302 VGKERVFFK-DKELQSMITENPSEAQV----------------------HVVSLRDIRAD 338
Query: 362 TLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL--------IRPLS----------- 402
PTGWTY T ++ I P S
Sbjct: 339 --------------------PTGWTYKSTNTEATEMKHASLSHVITPPSDRSLNLTPFYD 378
Query: 403 RGNITIYGVPYSEHSSFTELREFV 426
N+ +YGVPYSEHSS+ EL F+
Sbjct: 379 SRNVKMYGVPYSEHSSYRELASFI 402
>gi|50550517|ref|XP_502731.1| YALI0D12166p [Yarrowia lipolytica]
gi|49648599|emb|CAG80919.1| YALI0D12166p [Yarrowia lipolytica CLIB122]
Length = 603
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 209/398 (52%), Gaps = 68/398 (17%)
Query: 84 NSESEANCLFSPPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKG 143
NS+ E P+KK K K A K I K+ T VD+F +G ++G
Sbjct: 179 NSQGEMTSAVVEPVKKQK--RAKKPAPSFKII---------KMGETNVAVDSFMHGPLEG 227
Query: 144 CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI-D 202
+ YFL+HFH DHYGGL K W+HGPI+C+P+TA L +M L V ++ P+ ++ + +
Sbjct: 228 INLYFLSHFHADHYGGLRKSWNHGPIFCTPITAALCKMKLGVQDEWLVPIPIHIPFCVGN 287
Query: 203 GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS-RLMQSYPLLVNHR-VNVLYLDT 260
V+V +ANHCPGAA++ F + +H GDFRA+ L++ L + R ++ +YLDT
Sbjct: 288 DVEVIFFDANHCPGAAVMLF-TSPTKTAVHCGDFRANMNLVREIKLKLKQRELDEVYLDT 346
Query: 261 TYCNPKYKFPSKEDVL----NYVVRL-----------------------TKNCLKKQPKT 293
TY P + FPS+ V+ ++ VRL + N Q +T
Sbjct: 347 TYLGPSHAFPSQNRVVQVCADFCVRLNNLKMEQLEKAQRQSTIGRFFTSSPNSPVHQLRT 406
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL 353
L VVG Y+IGKE + + I+ LG K++A+ ++RR+L++F+ P +S L + + +H++
Sbjct: 407 LFVVGTYTIGKERLAIEIALRLGSKLFADTTKRRILKTFNDPVISELLTSDPLEAQVHLV 466
Query: 354 PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY----SETVGNQL-------------- 395
P+ + + L ++LK + ++ ++AF PTGW+Y S N+
Sbjct: 467 PLGQTRKDQLFEHLKSFKPHFSKIVAFAPTGWSYRPPKSAIQANEQATDLRPSYYDFGDL 526
Query: 396 -----DLIRPLSRGNI---TIYGVPYSEHSSFTELREF 425
+L R L R I Y VPYSEHSSF ELR F
Sbjct: 527 EYNVENLDRNLERSAIEPVQKYNVPYSEHSSFVELRAF 564
>gi|330805557|ref|XP_003290747.1| hypothetical protein DICPUDRAFT_37896 [Dictyostelium purpureum]
gi|325079097|gb|EGC32714.1| hypothetical protein DICPUDRAFT_37896 [Dictyostelium purpureum]
Length = 341
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 172/311 (55%), Gaps = 20/311 (6%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
P YK + GT F VD F+Y S + YFLTHFH DHY G+ K W+ G IYC+ T RLV
Sbjct: 1 PSYKVLHGTKFLVDGFQYKS-EDYKHYFLTHFHSDHYTGITKTWAFGNIYCTEETGRLVS 59
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHF--RLQDGQC--YLHTGDF 236
L V+ YI + N ++GVKVT L+ANHCPG+A++ F ++ +G+ LHTGDF
Sbjct: 60 HKLGVDKKYIKGISFNKTFEVEGVKVTFLDANHCPGSAIVLFEVKMPNGEIENILHTGDF 119
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
R M+ YP L ++ LYLD T+CNP+Y FP + +++ V + + + KTL +
Sbjct: 120 RYHPSMKQYPHLEGKEISKLYLDNTFCNPEYTFPPQHEIIKQVKDIVRK--ENNGKTLFL 177
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQ---SFDWPELSGNLCTQGNDTLLHVL 353
G Y IGKE + L +SK G I + +L S D + + +L T +
Sbjct: 178 FGTYVIGKEKILLEVSKQEGKPIGVTKEKFEILNCLDSIDQTKFTLDLTC----TPFRAV 233
Query: 354 PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPY 413
M L F+++ + L+ +Y V+ FRPTGW+ S+ I +RG Y V Y
Sbjct: 234 SMGLLGFQSMMNLLEESNGKYTKVIGFRPTGWSQSKKS------ITYQNRGPTVFYSVAY 287
Query: 414 SEHSSFTELRE 424
SEHSSF ELR+
Sbjct: 288 SEHSSFNELRD 298
>gi|356567248|ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
Length = 1402
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/325 (38%), Positives = 177/325 (54%), Gaps = 27/325 (8%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K IP T F VDAFR+ S YFL+HFH DHY GL WS G I+CS TA L+R L
Sbjct: 40 KLIPHTRFLVDAFRHAGPHSHS-YFLSHFHSDHYSGLSPSWSRGVIFCSHTTAALLRRIL 98
Query: 184 LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQC------YLHTGDFR 237
+ ++I PL L IDG VTLL+ANHCPGA F + Y+HTGDFR
Sbjct: 99 HIPAAFIVPLPLRQPLRIDGAHVTLLDANHCPGAVQFLFSVPRATADAAALRYVHTGDFR 158
Query: 238 ASRLMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK-----QP 291
M S P L + ++LDTTYCNPK+ FPS+E+ ++YV + ++ ++
Sbjct: 159 FCNSMVSEPALAPFVGADAVFLDTTYCNPKFVFPSQEESIDYVASVVESVERECEHNSSD 218
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
K L +V Y IGKE + L +++ KI+ +A + VL+ + E +G G ++ +H
Sbjct: 219 KVLFLVATYVIGKEKILLELARRFKRKIHVDARKMEVLRVLGYGE-NGEFTEDGKESNIH 277
Query: 352 VL---------PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS 402
V+ P F +K+ + G Y+ V+ F PTGWTY E N+ + S
Sbjct: 278 VVGWNLLGETWPYFRPNFVRMKEVMAERGGSYSKVVGFVPTGWTY-EVKRNRFAV---KS 333
Query: 403 RGNITIYGVPYSEHSSFTELREFVQ 427
+ I+ VPYSEHS++ ELRE+V+
Sbjct: 334 KDLFKIHLVPYSEHSNYDELREYVK 358
>gi|307105557|gb|EFN53806.1| hypothetical protein CHLNCDRAFT_136511 [Chlorella variabilis]
Length = 1506
Score = 211 bits (537), Expect = 6e-52, Method: Composition-based stats.
Identities = 129/342 (37%), Positives = 180/342 (52%), Gaps = 42/342 (12%)
Query: 123 YKKIPGTPFTVDAF--RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
+K IPG F VD F RY + AYFLTH H DHY GL WS G IYCS +TARL+
Sbjct: 12 HKLIPGCGFLVDGFQTRYAAHPSVKAYFLTHAHSDHYNGLRDDWSRGVIYCSHVTARLIA 71
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
L V ++HPL L++ +I GV+VTL+ ANHCPGA FRL DG+ ++HTGD R S
Sbjct: 72 HMLGVGRRWLHPLPLDSPTMIQGVEVTLVSANHCPGAVQFLFRLPDGRRFIHTGDMRFSP 131
Query: 241 LMQSYPLLVNHR---VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL---------- 287
+ + P L R + L+LDTTYCNP+Y FP +E+ + YV + L
Sbjct: 132 ALLANPHLQQFRRVGCDALFLDTTYCNPRYCFPPQEESIEYVASTIQRLLQEDAEQQQQE 191
Query: 288 -----------KKQP-KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWP 335
+++P + L ++ Y IGKE + A+ GV+++ + V+Q D P
Sbjct: 192 SQGEGREPGARQRRPFRRLYLISTYGIGKERILTAVHDRCGVRLHVADRKHAVMQQLDLP 251
Query: 336 --ELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYA--------AVLAFRPTGW 385
+ S T T +HV+ L ET + + +Q A V+ F PTGW
Sbjct: 252 GYDPSQLFTTDRGSTPVHVVQWGFLG-ETWPYFRPNFVSQEALRQELGAEEVVGFVPTGW 310
Query: 386 TYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
Y E + R +G +++ VPYSEH+SF ELRE+V+
Sbjct: 311 LY-EMRKETFAVKR---KGACSVHLVPYSEHNSFDELREYVR 348
>gi|357508239|ref|XP_003624408.1| DNA ligase [Medicago truncatula]
gi|355499423|gb|AES80626.1| DNA ligase [Medicago truncatula]
Length = 1498
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 178/318 (55%), Gaps = 20/318 (6%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
P K IP T F +D+FR+ + YFL+HFH DHY L WSHG I+CSP+T+ L+
Sbjct: 44 PHSKLIPNTRFLIDSFRH-TTPSSFTYFLSHFHSDHYSPLSSSWSHGIIFCSPITSHLLI 102
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQC--YLHTGDFRA 238
L + ++HPL LN VIDG VTL++ANHCPGA F++ + + Y+HTGDFR
Sbjct: 103 NILHIPSPFVHPLSLNQSVVIDGSVVTLIDANHCPGAVQFLFKVNETESPRYVHTGDFRF 162
Query: 239 SR-LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+R ++ L + ++LDTTYC+PK+ FP++ + ++Y+V + K C L +V
Sbjct: 163 NREMLLDLNLGEFIGADAVFLDTTYCHPKFVFPTQNESVDYIVDVVKEC--DGENVLFLV 220
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE--------LSGNLCTQGNDTL 349
Y +GKE + L I++ G K+ + + VL++ + E L N+ G + L
Sbjct: 221 ATYVVGKEKILLEIARRCGKKVCVDGKKMEVLRALGYGESGEFTEDRLESNVHVVGWNVL 280
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIY 409
P F +K+ + G Y+ V+ F PTGWTY + D + + + I+
Sbjct: 281 GETWPYFRPNFVRMKEIMVERG--YSKVVGFVPTGWTYEV----KRDKFKVREKDSCKIH 334
Query: 410 GVPYSEHSSFTELREFVQ 427
VPYSEHS++ ELRE+V+
Sbjct: 335 LVPYSEHSNYEELREYVR 352
>gi|296422077|ref|XP_002840589.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636808|emb|CAZ84780.1| unnamed protein product [Tuber melanosporum]
Length = 950
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/351 (38%), Positives = 184/351 (52%), Gaps = 47/351 (13%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
++CPF+K + G TVDAF+YGSI GC AYFL+HFH DHY GL +W HGPI+CS T
Sbjct: 558 AQKTCPFFKMLFGGSITVDAFKYGSIPGCQAYFLSHFHSDHYVGLTSKWDHGPIWCSRAT 617
Query: 176 ARLVRMCLLVNPSYIH--PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQD------G 227
A LVRM L V+P Y+ P E T+ V+DG++V L+ANHCPG+ L F QD
Sbjct: 618 ANLVRMKLRVDPKYVQEFPFEEWTD-VVDGIRVRGLDANHCPGSMLFLFE-QDCVGRLGK 675
Query: 228 QCYLHTGDFRASRLMQSYPLL-------VNHRVNVLYLDTTYCNPKYKFPSKEDVLN--- 277
Q LH GDFRAS ++PLL +++ +YLDTTY NPKY FPS++ V+
Sbjct: 676 QRILHCGDFRASAKHLNHPLLRPGKDGVKGQKLDSVYLDTTYLNPKYAFPSQKSVIKACE 735
Query: 278 -YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
V L K + Q T A + + F + S G + + R+ LQ P+
Sbjct: 736 ELCVGLNKESIDGQGGTFAKT-ATLMNRMGKFGSSSLLWGPIV--SEKRKSELQKLFAPK 792
Query: 337 LSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY--------- 387
S + + +H+ P+ + ETL+DYL + ++ ++ RP+GW+Y
Sbjct: 793 -SSHHKIRSKFASVHMTPLMKINPETLRDYLNKFNPHFSRIVGLRPSGWSYRPPSNRLTD 851
Query: 388 SETVGNQLD-------------LIRPLSRGNITIYGVPYSEHSSFTELREF 425
S +V N L L + S Y VPYSEHSSF EL F
Sbjct: 852 SPSVNNVLHSASWKGEYRLSELLPQHGSTRESKCYSVPYSEHSSFRELTMF 902
>gi|167523435|ref|XP_001746054.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775325|gb|EDQ88949.1| predicted protein [Monosiga brevicollis MX1]
Length = 893
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 183/360 (50%), Gaps = 59/360 (16%)
Query: 126 IPGTPFTVDAFR-YGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL 184
+PGT F VD FR I +FL+H+H DHYGGL +W+ GPIY SP TARLV L
Sbjct: 10 VPGTGFLVDCFRDKKKIAAGQKFFLSHYHADHYGGLNDKWAAGPIYASPPTARLVIDFLE 69
Query: 185 VNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQC------YLHTGDFRA 238
V+P +IH L + H ID V+VTL++ANHCPGAA++ F +++ +LHTGD R
Sbjct: 70 VDPKWIHELPFDETHTIDDVEVTLMDANHCPGAAMLLFGVRNQHAPEQRMYHLHTGDCRF 129
Query: 239 SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK-QPKTLVVV 297
M +P L + LYLDTTY NPKY FP +ED + + R L+ + +TLV+V
Sbjct: 130 HPRMLDHPTLQGIHIENLYLDTTYANPKYTFPPQEDTIEFCARTIAAELEAHRGRTLVLV 189
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQS----------FDWPELSGNLCTQGND 347
YSIGKE + L + +G ++ + ++L F L ++ T
Sbjct: 190 ATYSIGKEKILLRAHELVGARVEVTERKWKMLNHCLPIANLETIFTTEHLPAHVTTTQAA 249
Query: 348 TLL----HVLP-MSSLKFETLKDYLKP------YGNQYAAVLAFRPTGWTY--SETVGNQ 394
++ H L M+ + L DY K Y +++ ++AF PTGWTY S+ V +
Sbjct: 250 SVRIVGWHELGNMAPGGWTFLPDYPKLHEMLDFYASRFDRIVAFYPTGWTYTLSQAVRER 309
Query: 395 LDLI----------------------RPL------SRGNITIYGVPYSEHSSFTELREFV 426
+ RP ++ +T+Y VPYSEHSSF ELR V
Sbjct: 310 QAITASQSHAQTLAEASTEARAHLTARPAVLHAAETKNKVTVYTVPYSEHSSFDELRALV 369
>gi|242058371|ref|XP_002458331.1| hypothetical protein SORBIDRAFT_03g031460 [Sorghum bicolor]
gi|241930306|gb|EES03451.1| hypothetical protein SORBIDRAFT_03g031460 [Sorghum bicolor]
Length = 539
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/328 (35%), Positives = 175/328 (53%), Gaps = 23/328 (7%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
V S P IPG+ F VDAFR+ AYFL+HFH DHY GLG W G ++CS T
Sbjct: 48 VPASVPPTALIPGSRFLVDAFRHAG-DFSVAYFLSHFHSDHYSGLGPSWRRGLVFCSAPT 106
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL--QDGQCYLHT 233
ARLV L V P + L++ +DG VT ++ANHCPGA F + Y+HT
Sbjct: 107 ARLVSSVLSVPPQLVVSLDVGVRITVDGWSVTAVDANHCPGAVQFLFASPGPSAERYVHT 166
Query: 234 GDFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP- 291
GDFR + M P L+ R + ++LDTTYCNPK+ FPS+ED ++YVV K ++
Sbjct: 167 GDFRYTESMTRDPNLLEFVRADAVFLDTTYCNPKFTFPSQEDSVDYVVNAIKRVKEESSV 226
Query: 292 ---KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
+ L ++ Y++GKE + L +++ G I+ ++ + ++L + +G T
Sbjct: 227 SGERVLCLITTYAVGKERILLEVARRCGCSIHVDSRKMKILTVLGFGGENGVFTEDATGT 286
Query: 349 LLHVL---------PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIR 399
+HV+ P F +K+ + G YA + F PTGW Y ET +
Sbjct: 287 DVHVIGWNILGETWPYFQPNFVKMKEIMIERG--YAKAVGFVPTGWMY-ETKKEGFAV-- 341
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ ++ I+ VPYSEHSS+ ELR++++
Sbjct: 342 -RVKDSLEIHLVPYSEHSSYNELRDYIK 368
>gi|414880948|tpg|DAA58079.1| TPA: putative DNA ligase family protein, partial [Zea mays]
Length = 885
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 171/318 (53%), Gaps = 23/318 (7%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IPG+ F VDAFR+ AYFL+HFH DHY GLG W G ++CS TARLV L V
Sbjct: 58 IPGSRFLVDAFRHAG-NFSVAYFLSHFHSDHYSGLGPSWRRGLVFCSAPTARLVSSVLSV 116
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQD--GQCYLHTGDFRASRLMQ 243
P + L++ +DG VT ++ANHCPGA F + Y+HTGDFR + M
Sbjct: 117 PPQLVVSLDIGVRITVDGWGVTAVDANHCPGAVQFLFASPGPRAERYVHTGDFRYTESMT 176
Query: 244 SYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP----KTLVVVG 298
P L+ R + ++LDTTYCNPK+ FPS+ED ++Y+V K ++ + L ++
Sbjct: 177 RDPNLLEFVRADAVFLDTTYCNPKFTFPSQEDSVDYIVNAIKRVKEESSVSGERVLCLIA 236
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL----- 353
Y++GKE + L +++ G I+ ++ + ++L + + T +HVL
Sbjct: 237 TYAVGKEKILLEVAQRCGCSIHVDSRKMKILTLLGFGGKNSVFTEDATGTDVHVLGWNLL 296
Query: 354 ----PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIY 409
P F LK+ + G YA + F PTGW Y ET + + ++ I+
Sbjct: 297 GETSPYFQPNFVKLKEIMMERG--YAKAVGFVPTGWMY-ETKKEGFAV---RVKDSLEIH 350
Query: 410 GVPYSEHSSFTELREFVQ 427
VPYSEHSS+ ELR++V+
Sbjct: 351 LVPYSEHSSYNELRDYVK 368
>gi|414589580|tpg|DAA40151.1| TPA: hypothetical protein ZEAMMB73_008326 [Zea mays]
Length = 1174
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 175/297 (58%), Gaps = 9/297 (3%)
Query: 137 RYGSIKGCSAYFLTHFHYD----HYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHP 192
+Y KG S + L H Y GL + + HG IYCS +TA LV + + +H
Sbjct: 852 KYALYKGPSLWDLATTHNSILGHDYQGLTRSFCHGKIYCSSITASLVHHKIGIPWDRLHV 911
Query: 193 LELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHR 252
L LN + I GV + +ANHCPG+ +I F +G+ LHTGDFR S M + P+L +
Sbjct: 912 LTLNEKLNIAGVNLICFDANHCPGSIIILFEPPNGKAVLHTGDFRFSSKMANNPVLQSSC 971
Query: 253 VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAIS 312
V+ L LDTTYCNP+Y FPS+E V+ +V+ + PKTL ++G+Y+IGKE +F+ ++
Sbjct: 972 VHTLILDTTYCNPRYDFPSQEIVIQFVIEAIQ-AEAFNPKTLFLIGSYTIGKERLFMEVA 1030
Query: 313 KALGVKIYANASRRRVLQSFDWP-ELSGNLCTQGNDTLLHVLPMSSL-KFETLKDYLKPY 370
+ L K+Y A++ ++L+ + P E+ ++ +HV+PM +L F+ +K Y
Sbjct: 1031 RLLQKKVYVGAAKLQILKHLELPQEIMHWFTANEAESHIHVVPMWTLASFKRMKYLSNQY 1090
Query: 371 GNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+Y ++AF PTGW + + G + + +G+I Y VPYSEHSSFTEL++FV+
Sbjct: 1091 AGRYDLIVAFCPTGWAFGK--GRKKTPGKRWQQGSIIRYEVPYSEHSSFTELQQFVK 1145
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKG-CSAYFLTHFHYD 155
+ P + IPGTPF VDAFRY ++G CS +FLTHFH D
Sbjct: 631 KDTPLWCCIPGTPFRVDAFRY--LRGDCSHWFLTHFHVD 667
>gi|255086367|ref|XP_002509150.1| predicted protein [Micromonas sp. RCC299]
gi|226524428|gb|ACO70408.1| predicted protein [Micromonas sp. RCC299]
Length = 671
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 172/318 (54%), Gaps = 17/318 (5%)
Query: 123 YKKIPGTPFTVDAFR-YGSIKG---CSAYFLTHFHYDHYGGLGKRWSHGP----IYCSPL 174
+ ++PGT F VD F+ YG G C +FLTHFH DHY GL K S P ++CS
Sbjct: 319 WIRVPGTRFIVDGFQGYGKSHGGWWCRHWFLTHFHADHYRGLTK--STPPPGCLVWCSRP 376
Query: 175 TARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTG 234
TA L L + + +++ V+DGV+ T ++ANHCPGA +I F L TG
Sbjct: 377 TAELCASRLGIQRDRLRAVDVGRTIVVDGVRCTFIDANHCPGAVMIVFDGIPAGPVLATG 436
Query: 235 DFRASRLMQSYPLL--VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
D R M++ P L + R + LDTTYC+P + FP + +VL VR P+
Sbjct: 437 DCRYHPGMKTDPTLAALASRRPAVMLDTTYCSPAHVFPPQCEVLA-AVRDAVKAESFNPR 495
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWP--ELSGNLCTQGND-TL 349
L + G Y+IGKE VF +KALG K+Y + +VL + + ++ T + T
Sbjct: 496 VLFLFGTYTIGKERVFFEAAKALGKKVYVGKQKMKVLDALGSAIDDADRDMITADDQATN 555
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIY 409
LHV+PM S F +K L+ Y N+Y ++AF+PTGWT+ E + RG + Y
Sbjct: 556 LHVVPMGSTSFGRMKTILRYYKNRYDTIVAFKPTGWTF-EAAKKHARATKRTQRGAMIQY 614
Query: 410 GVPYSEHSSFTELREFVQ 427
VPYSEHSSF ELR FV+
Sbjct: 615 SVPYSEHSSFDELRAFVK 632
>gi|326430673|gb|EGD76243.1| hypothetical protein PTSG_11661 [Salpingoeca sp. ATCC 50818]
Length = 1437
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 184/344 (53%), Gaps = 43/344 (12%)
Query: 126 IPGTPFTVDAF---RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMC 182
+P TP VD F +Y + + +FL+HFH DHYG L K W GP+YCS TA+LV
Sbjct: 6 VPFTPIVVDHFNDKKYHRRESGTLFFLSHFHADHYGKLNKDWQWGPVYCSQTTAKLVAAV 65
Query: 183 LLVNPSYIHPLELNT-EHVIDGVKVTLLEANHCPGAA--LIHFRLQDG---QCYLHTGDF 236
L V+ +Y+ PL L+T V +V L++ANHCPGAA L H R +G YLH+GD
Sbjct: 66 LEVDANYLRPLPLDTWVDVTATCRVALIDANHCPGAAMFLFHVRETEGGLEHWYLHSGDC 125
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK---- 292
R + + +PLL N +++L+LDTTYC+PK+ FP +E V+ +V + + +
Sbjct: 126 RYTPAWKQHPLLQNVALDILFLDTTYCDPKHTFPPQEQVVRFVSDTVSQYMHEDQQRADG 185
Query: 293 --TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQS--FDWP----EL--SGNLC 342
TL +V YS+GKE + + K + + +R ++Q DWP E+ S +L
Sbjct: 186 VDTLFLVATYSVGKEKILTQLVKDQHKPLVVSEKKRLMMQQLDLDWPVPFDEMFTSDHLA 245
Query: 343 TQGNDTLLHVLPMSSL-------KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+ + H+L + +ETL D + Y +Y ++AF PTGWTY +Q
Sbjct: 246 SNVHVVGWHMLGTMAAGGWTFLPDYETLHDMIDHYKPRYHRIVAFVPTGWTYVIAKEHQR 305
Query: 396 D-------------LIRPLSRGNITIYGVPYSEHSSFTELREFV 426
L ++ N+T++ VPYSEHS++ ELREFV
Sbjct: 306 RQALAQHDEEVLGVLHHKETKRNVTVFTVPYSEHSNYLELREFV 349
>gi|47219683|emb|CAG12605.1| unnamed protein product [Tetraodon nigroviridis]
Length = 250
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 159/308 (51%), Gaps = 91/308 (29%)
Query: 120 CPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
CPFYKKIPGT F VDAFRYG I+G + YFLTHFH DHYGGL K S P+YC+ +T LV
Sbjct: 1 CPFYKKIPGTKFVVDAFRYGKIEGITTYFLTHFHSDHYGGLTKN-STLPVYCNKITGNLV 59
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
R L V YIH L +NT+ +DGV V LL+ANH
Sbjct: 60 RSKLKVAEQYIHVLPMNTQVAVDGVTVVLLDANH-------------------------- 93
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
YC+P+Y FP++++V+N+ + P+T+VV G+
Sbjct: 94 ----------------------YCSPEYTFPTQQEVINFAASTAFEEVALNPRTIVVCGS 131
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
YS+GKE VF +S + +++ S++
Sbjct: 132 YSVGKEKVFFELSIS-----FSSDSQK--------------------------------- 153
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSF 419
L+ +L + +QY ++AF+PTGWT+S+ V + D ++P GNI+IYG+PYSEHSSF
Sbjct: 154 ---LEQHLARFSSQYDQLVAFKPTGWTFSQQVESVGD-VQPDVSGNISIYGIPYSEHSSF 209
Query: 420 TELREFVQ 427
EL+ FVQ
Sbjct: 210 MELKRFVQ 217
>gi|290998549|ref|XP_002681843.1| predicted protein [Naegleria gruberi]
gi|284095468|gb|EFC49099.1| predicted protein [Naegleria gruberi]
Length = 330
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 179/310 (57%), Gaps = 19/310 (6%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K IPGT F VD F+Y + + +FLTHFH DHY GL K WSHG IYC+ T LV+
Sbjct: 9 KLIPGTDFVVDGFKYK--QKYNTFFLTHFHSDHYAGLVKTWSHGSIYCTIPTCNLVKKQF 66
Query: 184 LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL-QDGQCYLHTGDFRASRLM 242
+ Y++ E N + GVK T L+ANHCPG++L+ F++ + G+ +LHTGD R R
Sbjct: 67 GIADKYLNACEFNKTYEYKGVKFTFLDANHCPGSSLVLFQVSKTGKAFLHTGDMRFDRSK 126
Query: 243 ---QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT-LVVVG 298
S + ++ +++DTTYC+P Y FP + + ++++ L ++ K K+ LV++G
Sbjct: 127 IDGISLKGVPKKQLESIFIDTTYCDPFYTFPKQVEAIDFIADLLESKFKNTSKSYLVLIG 186
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG-NDTLLHVLPMSS 357
Y IGKE + +SK G K++ + + L+ + P N+ T +T +H++ M
Sbjct: 187 TYLIGKERIAEGLSKRTGKKVFVTFEKYKTLECLELPYF--NIFTMNIAETNIHIVNMKD 244
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ ++ L +K + ++A +P+ W + + +D+ + GNIT+ VPYSEHS
Sbjct: 245 VSWKRLFQ-IKSSNRNVSEIIAIKPSAWCFKD-----MDIPK---NGNITLIEVPYSEHS 295
Query: 418 SFTELREFVQ 427
SFTEL++ V+
Sbjct: 296 SFTELKDCVE 305
>gi|12597768|gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis thaliana]
Length = 1417
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 173/324 (53%), Gaps = 25/324 (7%)
Query: 119 SCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL 178
S P K+IP T F VD FR A+FL+HFH DHY GL WS G IYCS TARL
Sbjct: 53 SIPNSKRIPNTNFIVDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARL 112
Query: 179 VRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ----DGQCYLHTG 234
V L V ++ L +N IDG +V L+EANHCPGA F+++ + Y+HTG
Sbjct: 113 VAEILQVPSQFVFALPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGFEKYVHTG 172
Query: 235 DFRASRLMQSYPLLVNHRVNV--LYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
DFR M+ P L N V ++LDTTYCNPK+ FPS+E+ + YVV + + K
Sbjct: 173 DFRFCDEMRFDPFL-NGFVGCDGVFLDTTYCNPKFVFPSQEESVGYVVSVIDKI--SEEK 229
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
L +V Y +GKE + + I++ KI +A + +L E G N++ +HV
Sbjct: 230 VLFLVATYVVGKEKILVEIARRCKRKIVVDARKMSMLSVLGCGE-EGMFTEDENESDVHV 288
Query: 353 L---------PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSR 403
+ P F + + + G Y V+ F PTGWTY E N+ + +
Sbjct: 289 VGWNVLGETWPYFRPNFVKMNEIMVEKG--YDKVVGFVPTGWTY-EVKRNKFAV---RFK 342
Query: 404 GNITIYGVPYSEHSSFTELREFVQ 427
++ I+ VPYSEHS++ ELREF++
Sbjct: 343 DSMEIHLVPYSEHSNYDELREFIK 366
>gi|334183682|ref|NP_176845.2| DNA ligase 6 [Arabidopsis thaliana]
gi|332196428|gb|AEE34549.1| DNA ligase 6 [Arabidopsis thaliana]
Length = 1396
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 173/324 (53%), Gaps = 25/324 (7%)
Query: 119 SCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL 178
S P K+IP T F VD FR A+FL+HFH DHY GL WS G IYCS TARL
Sbjct: 53 SIPNSKRIPNTNFIVDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARL 112
Query: 179 VRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ----DGQCYLHTG 234
V L V ++ L +N IDG +V L+EANHCPGA F+++ + Y+HTG
Sbjct: 113 VAEILQVPSQFVFALPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGFEKYVHTG 172
Query: 235 DFRASRLMQSYPLLVNHRVNV--LYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
DFR M+ P L N V ++LDTTYCNPK+ FPS+E+ + YVV + + K
Sbjct: 173 DFRFCDEMRFDPFL-NGFVGCDGVFLDTTYCNPKFVFPSQEESVGYVVSVIDKI--SEEK 229
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
L +V Y +GKE + + I++ KI +A + +L E G N++ +HV
Sbjct: 230 VLFLVATYVVGKEKILVEIARRCKRKIVVDARKMSMLSVLGCGE-EGMFTEDENESDVHV 288
Query: 353 L---------PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSR 403
+ P F + + + G Y V+ F PTGWTY E N+ + +
Sbjct: 289 VGWNVLGETWPYFRPNFVKMNEIMVEKG--YDKVVGFVPTGWTY-EVKRNKFAV---RFK 342
Query: 404 GNITIYGVPYSEHSSFTELREFVQ 427
++ I+ VPYSEHS++ ELREF++
Sbjct: 343 DSMEIHLVPYSEHSNYDELREFIK 366
>gi|297838379|ref|XP_002887071.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332912|gb|EFH63330.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1413
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 180/326 (55%), Gaps = 26/326 (7%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
P K+IP T F VD FR+ S A+FL+HFH DHY GL WS G I+CS TARLV
Sbjct: 55 PQSKRIPKTNFIVDLFRFPQHSSTSVAFFLSHFHSDHYSGLSSTWSKGIIFCSHKTARLV 114
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAA--LIHFRLQDG--QCYLHTGD 235
L V ++ L +N +IDG +V L+EANHCPGA L +L++G + Y+HTGD
Sbjct: 115 EEILQVPSQFVFALPMNQMVMIDGSEVVLIEANHCPGAVQFLFKVKLENGGFERYVHTGD 174
Query: 236 FRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVV----RLTKNCLKKQ 290
FR M+ L + ++LDTTYCNPK+ FP++E+ + YVV ++ C++ +
Sbjct: 175 FRFCDEMRFDSFLSGFIGCDGVFLDTTYCNPKFVFPTQEESVGYVVSVIDKIDGECVETK 234
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
K L +V Y IGKE + + I++ KI + + +L E SG N++ +
Sbjct: 235 KKVLFLVATYVIGKEKILVEIARRCKRKIVVDLRKMSILGILGCGE-SGMFTEDVNESDV 293
Query: 351 HVLPMSSL---------KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL 401
HV+ + L F + + + G Y V+ F PTGWTY E N+ +
Sbjct: 294 HVVGWNVLGETWPYFRPNFVKMNEIMVEKG--YDKVVGFVPTGWTY-EVKRNKFAV---R 347
Query: 402 SRGNITIYGVPYSEHSSFTELREFVQ 427
+ ++ I+ VPYSEHS++ ELRE+++
Sbjct: 348 FKDSMEIHLVPYSEHSNYDELREYIK 373
>gi|222619063|gb|EEE55195.1| hypothetical protein OsJ_03041 [Oryza sativa Japonica Group]
Length = 1455
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 173/328 (52%), Gaps = 23/328 (7%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
V S P IPG+ F VDAFR+ ++YFL+HFH DHY GLG W G ++CSPLT
Sbjct: 47 VPASVPPTALIPGSRFLVDAFRHAG-DFTASYFLSHFHSDHYTGLGPSWRRGLVFCSPLT 105
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ--DGQCYLHT 233
ARL+ L V P + L+ +DG V ++ANHCPGA FR + + Y+HT
Sbjct: 106 ARLLVSVLSVPPQLVVVLDAGVRVTVDGWCVVAVDANHCPGAVQFLFRSSGPNAERYVHT 165
Query: 234 GDFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVV----RLTKNCLK 288
GDFR S+ M + P L+ + ++LDTTYCNPK+ FP +++ L YVV R+ +
Sbjct: 166 GDFRFSQSMITEPNLLEFIGADAVFLDTTYCNPKFTFPPQKESLEYVVNSIKRVKEESRA 225
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
+ L ++ Y +GKE + L +++ G KI+ ++ + +L G T
Sbjct: 226 SGERVLCLIATYVVGKERILLEVARRCGCKIHVDSRKMEILTLLGIGGEDGVFTEDAAAT 285
Query: 349 LLHVL---------PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIR 399
+HV P F +K+ + G Y + F PTGW Y ET +
Sbjct: 286 DVHVTGWNILGETWPYFRPNFVKMKEIMVERG--YNKAVGFVPTGWMY-ETKKEGFAV-- 340
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFVQ 427
++ ++ I+ VPYSEHSS+ ELR++V+
Sbjct: 341 -RTKDSLEIHLVPYSEHSSYNELRDYVK 367
>gi|320167046|gb|EFW43945.1| ATP dependent DNA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 1559
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 168/344 (48%), Gaps = 87/344 (25%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKV 206
+FL+HFH DHY GL K W ARLV L V+ I PLE NT ID V+V
Sbjct: 108 FFLSHFHADHYAGLTKTWR---------AARLVIKVLEVDERMIRPLEFNTPVTIDNVQV 158
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLV--NHRVNVLYLDTTYCN 264
TL++ANHCPGAA++ F++ +G YLHTGDFR M YP L+ +++ L+LDTTYCN
Sbjct: 159 TLMDANHCPGAAMMLFKVSNGLVYLHTGDFRYHPRMNDYPALIQAQNQIETLFLDTTYCN 218
Query: 265 PKYKFPSKEDVLNYVVRLTKNCLKK--QP------------------------------- 291
PKY P+++ +++V N ++ QP
Sbjct: 219 PKYTLPAQDAPIDFVAETVFNMMRSELQPAGDNAALPPAPKRVKLSVDDDDAAAHESQRL 278
Query: 292 ---------KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ----------SF 332
KTL ++ +Y IGKE +++ +S+ G KI + + VL S
Sbjct: 279 ASDGDFSRVKTLFLIASYVIGKERLYVEVSRRCGCKIVVDERKHAVLALQEGIDMSMFSL 338
Query: 333 DWPELSGNLCTQGNDTLLHVLPMSSLKFET----LKDYLKPYGNQYAAVLAFRPTGWTY- 387
DW D+ +HV+ +F L L Y ++ ++AF PTGWTY
Sbjct: 339 DW-----------RDSPVHVMAPGGWRFNANHSLLTKMLAHYAPRFDRLVAFLPTGWTYT 387
Query: 388 -----SETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ G + L + R NI +Y +PYSEHSSFTELR+FV
Sbjct: 388 FKYATTSAKGVKYSLEQ---RDNIQVYSIPYSEHSSFTELRQFV 428
>gi|145352117|ref|XP_001420404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580638|gb|ABO98697.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 346
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/320 (39%), Positives = 172/320 (53%), Gaps = 14/320 (4%)
Query: 121 PFYKKIPGTPFTVDAFRYG--SIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL 178
P + + PGT F VD F Y S C +FLTHFH DH+ GL + + G +Y + T L
Sbjct: 1 PAWIRPPGTMFIVDGFEYAASSEARCEHWFLTHFHADHHRGLTRTFDRGVVYGTRTTTEL 60
Query: 179 VRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL---QDGQCYLHTGD 235
VR + V + +E +DGV VT L ANHCPGAA+I F +D LHTGD
Sbjct: 61 VRTKIGVPRERLRVVEFGVVVRVDGVDVTFLRANHCPGAAMICFEFPHRRDASPVLHTGD 120
Query: 236 FRASRLMQSYPLLVNHRVN------VLYLDTTYCNPKY-KFPSKEDVLNYVVRLTKNCLK 288
FR M++ P L+ + +L LDTTYC+ ++ FP++E VL V +
Sbjct: 121 FRFHDGMRNDPTLLRITSDPSAPRPILILDTTYCSLEHDDFPTQERVLKAVRDAVVHEDL 180
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW-PELSGNLCTQGND 347
+ L + G Y+IGKE VFL +K L K+Y ++R V+ + PE + +
Sbjct: 181 LSTRKLFLFGTYTIGKEKVFLEAAKVLNRKVYIGKAKRSVMDAIALDPEERSAMTHDDSK 240
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNIT 407
T LHV+PM S F + LK Y +++ V+AFRPTGWT+S R RG +
Sbjct: 241 TNLHVVPMGSTSFMKMASILKYYKSRFDTVIAFRPTGWTFSAQKKTARATSR-RQRGRLI 299
Query: 408 IYGVPYSEHSSFTELREFVQ 427
YG+PYSEHSS ELREFV+
Sbjct: 300 QYGLPYSEHSSLNELREFVR 319
>gi|219110329|ref|XP_002176916.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411451|gb|EEC51379.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 684
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 157/265 (59%), Gaps = 19/265 (7%)
Query: 101 KASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGL 160
+ NG+ H RSCP YKKI GT F D F Y YFLTHFH DHYGG+
Sbjct: 405 RNGNGRQYQVHYSA---RSCPLYKKITGTDFVCDGFHYARSSLTQNYFLTHFHSDHYGGI 461
Query: 161 GKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDG----VKVTLLEANHCPG 216
K W+ G IYCS TA LV L V+ ++HPL + T V+ V VTLL+ANHCPG
Sbjct: 462 SKAWNAGTIYCSFSTANLVNQQLGVDRKFLHPLPMMTPIVVASRGKPVTVTLLDANHCPG 521
Query: 217 AALIHFRLQDGQCYLHTGDFRASR-LMQSYPLL-----VNHRVNVLYLDTTYCNPKYKFP 270
A + F + + + LH GDFR +R +MQ+ L ++ ++LDTTYC+PKY P
Sbjct: 522 AVMFLFEVGNRR-LLHVGDFRWNREIMQAQGPLRPFFDRTQNLDEIFLDTTYCDPKYSLP 580
Query: 271 SKEDVLNYVVRLTKNCL----KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRR 326
+++ + V++ + + + +TL++ GAY+IGKE ++L++++ LG+K++ ++ R
Sbjct: 581 DQQEAIKETVKVAIEQVGLSKRNKDRTLMLFGAYTIGKERIYLSVAEKLGLKVFVDSRRY 640
Query: 327 RVLQSFDWPELS-GNLCTQGNDTLL 350
R+L++ +WP S L T+ +T+L
Sbjct: 641 RILKALEWPSESIAMLTTRPEETIL 665
>gi|296087222|emb|CBI33596.3| unnamed protein product [Vitis vinifera]
Length = 1390
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 179/331 (54%), Gaps = 38/331 (11%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSA-----YFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
P K IP + F VD FR CS YFL+HFH DHY GL +WS+G I+CS T
Sbjct: 47 PQSKLIPKSRFVVDGFR------CSGDYSVTYFLSHFHSDHYSGLSPKWSNGIIFCSNTT 100
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ--DG--QCYL 231
ARL+ L V+ +++PL ++ +IDG +V LL+ANHCPGA F++ DG + Y+
Sbjct: 101 ARLLVEVLGVSSLFVYPLAVSQPVLIDGCEVALLDANHCPGAVQFLFKVPGVDGRFERYV 160
Query: 232 HTGDFRASRLMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVVR------LTK 284
HTGDFR M+ P L ++LDTTYCNPK+ FPS+++ ++Y+V L
Sbjct: 161 HTGDFRFCESMKLEPCLGEFVGSEAVFLDTTYCNPKFVFPSQDESVDYIVEAIERIGLEN 220
Query: 285 NCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ--------SFDWPE 336
L K L +V Y IGKE + L IS+ KI+ + + VL+ F E
Sbjct: 221 KGLMKS--VLFLVATYVIGKERILLEISRRRNCKIHVDGRKMSVLRVLGYEDGGVFTEDE 278
Query: 337 LSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD 396
++ G + L P F +K+ + G Y+ V+ F PTGWTY E N+
Sbjct: 279 SKSDVHVVGWNVLGETWPYFRPNFVKMKEIMIERG--YSKVVGFVPTGWTY-EVKRNKFA 335
Query: 397 LIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ ++ + I+ VPYSEHS++ ELRE+V+
Sbjct: 336 M---RTKDSFEIHLVPYSEHSNYDELREYVK 363
>gi|359488141|ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
Length = 1449
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 179/331 (54%), Gaps = 38/331 (11%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSA-----YFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
P K IP + F VD FR CS YFL+HFH DHY GL +WS+G I+CS T
Sbjct: 90 PQSKLIPKSRFVVDGFR------CSGDYSVTYFLSHFHSDHYSGLSPKWSNGIIFCSNTT 143
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ--DG--QCYL 231
ARL+ L V+ +++PL ++ +IDG +V LL+ANHCPGA F++ DG + Y+
Sbjct: 144 ARLLVEVLGVSSLFVYPLAVSQPVLIDGCEVALLDANHCPGAVQFLFKVPGVDGRFERYV 203
Query: 232 HTGDFRASRLMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVVR------LTK 284
HTGDFR M+ P L ++LDTTYCNPK+ FPS+++ ++Y+V L
Sbjct: 204 HTGDFRFCESMKLEPCLGEFVGSEAVFLDTTYCNPKFVFPSQDESVDYIVEAIERIGLEN 263
Query: 285 NCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ--------SFDWPE 336
L K L +V Y IGKE + L IS+ KI+ + + VL+ F E
Sbjct: 264 KGLMKS--VLFLVATYVIGKERILLEISRRRNCKIHVDGRKMSVLRVLGYEDGGVFTEDE 321
Query: 337 LSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD 396
++ G + L P F +K+ + G Y+ V+ F PTGWTY E N+
Sbjct: 322 SKSDVHVVGWNVLGETWPYFRPNFVKMKEIMIERG--YSKVVGFVPTGWTY-EVKRNKFA 378
Query: 397 LIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ ++ + I+ VPYSEHS++ ELRE+V+
Sbjct: 379 M---RTKDSFEIHLVPYSEHSNYDELREYVK 406
>gi|307108579|gb|EFN56819.1| hypothetical protein CHLNCDRAFT_144365 [Chlorella variabilis]
Length = 520
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 149/273 (54%), Gaps = 9/273 (3%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K +PGTPF VD FR+ C A+FLTH H DH GL + +S GPIYCSP+TARL+R +
Sbjct: 9 KWVPGTPFLVDGFRFQH-PACRAFFLTHMHSDHTTGLSRSFSAGPIYCSPITARLLRCDM 67
Query: 184 LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQ 243
+ P I L L+ I GV+V ++ANHCPGA + FR LHTGD R M
Sbjct: 68 GIRPDLIRILPLDLPTTICGVEVVPIDANHCPGAVMFLFRAPT--TILHTGDVRWQAGMA 125
Query: 244 SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP--KTLVVVGAYS 301
+ L +V+VL LDTTY K+ FP +E+V+ +V+ P L VVG+Y
Sbjct: 126 QHAALTGRQVDVLMLDTTYSQRKWTFPPQEEVVELMVQAMAREAAAGPPGAVLFVVGSYH 185
Query: 302 IGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQ-GNDTLLHVLPMS-SLK 359
IGKE +L ALG +++ + ++RR+L P L T + +HVL M L
Sbjct: 186 IGKERAYLGAGAALGWRVHCSPAKRRLLHMLGLPAAWLALLTDVAEEAQIHVLGMGEQLH 245
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG 392
+ L D + G ++ +A RPTGW++ G
Sbjct: 246 PQALADRIA--GTRWQRAVAIRPTGWSWRPKGG 276
>gi|294898790|ref|XP_002776376.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
gi|239883314|gb|EER08192.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
Length = 388
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 168/310 (54%), Gaps = 22/310 (7%)
Query: 125 KIPGT--PFTVDAFRYGSI--KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
+IPG F VD F + YFLTHFH DH GL K + G IYCSP+TA LV
Sbjct: 24 EIPGQTEAFVVDGFGVPVRLRQDSRTYFLTHFHGDHTWGLTKGFCRGTIYCSPITAELVI 83
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
+ V+PS + LEL I GVKVT L+ANHCPGA + F G LHTGDFRAS
Sbjct: 84 QIIGVDPSRVVRLELGEPTEIAGVKVTCLDANHCPGAVMFLFCGAGGWTGLHTGDFRAST 143
Query: 241 -LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
L+++ P +N ++LDTTY + ++ PS+E+ L+ + R+ + +P T+ VVG
Sbjct: 144 ALLKTVP--AYGVINTVWLDTTYSDRRFVHPSREEALDMISRIVTK--ENEPGTMFVVGG 199
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND--TLLHVLPMSS 357
Y +GKES + IS+ LG KI+ RR++++ + L + D + +
Sbjct: 200 YRLGKESCAVRISEVLGKKIFVPKKRRKIMEICG--AIPEKLIAEKEDYGVVFDAMGRIG 257
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
++L DYL Y+ V+ FR TGWT E+ R +Y +PYSEHS
Sbjct: 258 SSPDSLADYLD---AGYSKVVGFRCTGWTRKESC------WRSSKFPGCVLYSIPYSEHS 308
Query: 418 SFTELREFVQ 427
SFTEL EF++
Sbjct: 309 SFTELVEFLK 318
>gi|357130735|ref|XP_003567002.1| PREDICTED: uncharacterized protein LOC100835014 [Brachypodium
distachyon]
Length = 1365
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 170/328 (51%), Gaps = 23/328 (7%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
V + P IP + F VDAFR+ AYFL+HFH DHY GLG W G ++CS T
Sbjct: 45 VPATVPSTALIPNSSFLVDAFRHAG-DFSVAYFLSHFHSDHYAGLGPSWRRGLVFCSAPT 103
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL--QDGQCYLHT 233
ARL+ L V I +++ +DG V ++ANHCPGA F + + Y+HT
Sbjct: 104 ARLLASVLSVPSELIVSIDIGARITVDGWGVVAVDANHCPGAVQFLFTSPGPNTKRYVHT 163
Query: 234 GDFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ-- 290
GDFR + M+S P L+ + ++LDTTYCNPK+ FPS+E+ + YVV K ++
Sbjct: 164 GDFRYTDSMRSDPNLLEFVGADAVFLDTTYCNPKFTFPSQEESVEYVVNTIKQVKEESEA 223
Query: 291 --PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
+ L ++ Y +GKE + L +++ G I+ ++ + ++L + G +
Sbjct: 224 AGERVLFLIATYVVGKEKILLEVARRCGCMIHVDSRKMKILTGLGFGGEKGVFTEDAAAS 283
Query: 349 LLHVL---------PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIR 399
+HV P F +K+ + G Y ++F PTGW Y ET +
Sbjct: 284 DVHVTGWNILGETWPYFRPNFVKMKEIMMERG--YTKAVSFVPTGWMY-ETKKEGFAV-- 338
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ ++ I+ VPYSEHSS+ ELRE+V+
Sbjct: 339 -RVKDSLKIHLVPYSEHSSYDELREYVK 365
>gi|294955916|ref|XP_002788744.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
gi|239904285|gb|EER20540.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
Length = 388
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 168/310 (54%), Gaps = 22/310 (7%)
Query: 125 KIPGT--PFTVDAFRYGSI--KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
+IPG F VD F + YFLTHFH DH GL K + G IYCSP+TA LV
Sbjct: 24 EIPGQTEAFVVDGFGVPVRLRQDSRTYFLTHFHGDHTWGLTKGFCRGTIYCSPITAELVI 83
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS- 239
+ V+PS + LEL I G+KVT ++ANHCPGA + F G LHTGDFRAS
Sbjct: 84 QVIGVDPSRVVKLELGEPTEIAGIKVTCIDANHCPGAVMFLFCGTGGWTGLHTGDFRASA 143
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
L+++ P +N ++LDTTY + ++ PS+E+ L+ + R+ + +P T+ VVG
Sbjct: 144 ALLKTVP--AYGVINTVWLDTTYSDRRFVHPSREEALDMISRIVTK--ENEPGTMFVVGG 199
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND--TLLHVLPMSS 357
Y +GKES + IS+ LG KI+ RR++++ + L + D + +
Sbjct: 200 YRLGKESCAVRISEVLGKKIFVPKKRRKIMEICG--AIPEKLIAEKEDYGVVFDAMGRVG 257
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
++L D+L Y+ V+ FR TGWT E+ R +Y +PYSEHS
Sbjct: 258 SSPDSLADFLD---AGYSKVVGFRCTGWTRKES------CWRSSKFPGCVLYSIPYSEHS 308
Query: 418 SFTELREFVQ 427
SFTEL EF++
Sbjct: 309 SFTELVEFLK 318
>gi|452847871|gb|EME49803.1| hypothetical protein DOTSEDRAFT_40954 [Dothistroma septosporum
NZE10]
Length = 849
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 140/247 (56%), Gaps = 27/247 (10%)
Query: 69 KLKQANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKST--ATHLKKIVDRSCPFYKKI 126
K Q+N FD+ N S N L S + S ++ A+ K R+CPFYK +
Sbjct: 330 KPGQSNPFDVGKPTMNGGSAFNKLMSGHAEDAAWSEAAASEYASRGKPAYTRTCPFYKIL 389
Query: 127 PGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVN 186
PG VDAFRYG+++GC AYFL+HFH DHY GL WSHGPIYCS +TA LVR L V+
Sbjct: 390 PGLSICVDAFRYGAVEGCKAYFLSHFHSDHYVGLTSTWSHGPIYCSKVTANLVRQQLRVD 449
Query: 187 PSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHF-----RLQDG----QCYLHTG 234
P Y+ PL+ + GVKVT++ ANHCPG++L F + Q G Q LH G
Sbjct: 450 PKYVVPLDFEASFEVPGTRGVKVTMISANHCPGSSLYLFEKVVGKKQSGEPRSQRILHCG 509
Query: 235 DFRASRLMQSYPLLVNH------------RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL 282
DFRA R+ +PLL+ H +++V YLDTTY NPKY FPS+E V+ +
Sbjct: 510 DFRACRMHVEHPLLMPHVRDKLAGTTREQKIDVCYLDTTYLNPKYAFPSQEVVIKACADM 569
Query: 283 TKNCLKK 289
CL K
Sbjct: 570 CV-CLSK 575
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 84/160 (52%), Gaps = 22/160 (13%)
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND 347
K + + LVVVG YSIGKE + L I+KAL KIYA AS++R++ + + PEL + +
Sbjct: 641 KTRGRLLVVVGTYSIGKERIALGIAKALRSKIYAPASKQRIVAALEDPELDARMTNDPRE 700
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD--LIRPL---- 401
+H+ P+ ++ ETL DYLK + + + FRP+GW Y D L++ +
Sbjct: 701 AQVHLTPLFEIRAETLDDYLKDFFPHFTRAVGFRPSGWNYRPPNSRFTDSPLVQTVLHSD 760
Query: 402 ----------------SRGNITIYGVPYSEHSSFTELREF 425
S + +GVPYSEHSSF EL F
Sbjct: 761 NWKSTYSMKELTPQRGSSSRASCFGVPYSEHSSFRELTMF 800
>gi|413943530|gb|AFW76179.1| putative DNA ligase family protein [Zea mays]
Length = 343
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 158/298 (53%), Gaps = 22/298 (7%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVK 205
AYFL+HFH DHY GLG W G ++CS TARLV L V P + L++ +DG
Sbjct: 46 AYFLSHFHSDHYSGLGPSWCRGLVFCSAPTARLVSSVLSVPPQLVVSLDIGVRITVDGWG 105
Query: 206 VTLLEANHCPGAALIHFRLQDGQC--YLHTGDFRASRLMQSYPLLVNH-RVNVLYLDTTY 262
VT ++ANHCPGA F + Y+HTGDF + M P L+ R + ++LDTTY
Sbjct: 106 VTAVDANHCPGAVQFLFASTGSKAKRYVHTGDFHYTESMTRDPNLLEFVRADAVFLDTTY 165
Query: 263 CNPKYKFPSKEDVLNYVVRLTKNCLKKQP----KTLVVVGAYSIGKESVFLAISKALGVK 318
CNPK+ FPS+ED ++Y+V K ++ + L ++ Y++GKE + L +++ G
Sbjct: 166 CNPKFTFPSREDSVDYIVNAIKRVKEESSVSGERVLCLIATYAVGKEKILLEVAQRCGCS 225
Query: 319 IYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV---------LPMSSLKFETLKDYLKP 369
I+ ++ + ++L + + T +HV LP F LK+ +
Sbjct: 226 IHVDSRKMKILTLLGFGGKNSVFTEDATGTDVHVLGWNLLGETLPYFQPNFVKLKEIMME 285
Query: 370 YGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
G YA + F PTGW Y + + + ++ I+ VPYSEHSS+ ELR++V+
Sbjct: 286 RG--YAKAVGFVPTGWMYE----TKKEGFAVRVKDSLEIHLVPYSEHSSYNELRDYVK 337
>gi|443916875|gb|ELU37809.1| ataxia telangiectasia mutated [Rhizoctonia solani AG-1 IA]
Length = 3918
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 173/402 (43%), Gaps = 93/402 (23%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS----- 172
+ PFYK +PG P VDAF YG I +AYFL+H H DHY L W +GPIYCS
Sbjct: 249 KPAPFYKVMPGMPIAVDAFCYGKIPEVTAYFLSHAHSDHYTNLSSSWKNGPIYCSCEMDI 308
Query: 173 ------------PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGA 217
TA L++ L V+ +++PL N I GV+VTL++ NHCPG+
Sbjct: 309 SVDSAGFNRLEAVTTANLIKHMLRVDSKWVNPLPDNQAVEIPDTGGVRVTLIDGNHCPGS 368
Query: 218 ALIHFR----LQDGQ--------------CYLHTGDFRASRLMQSYPLLVNHRVNVL--- 256
+L F + G YLH GDFRA +P + V+
Sbjct: 369 SLFVFSGRQTIDAGDSPIKSPFVGSDRHFTYLHCGDFRACPAHALHPYCFPPQTMVINAC 428
Query: 257 -YLDTTYCNPKYKFPSKEDVLNYVVRLTKN------CLKKQPK----------------- 292
L Y +K + L N K PK
Sbjct: 429 AELAKRYIQEDKAIQTKNGKQKSLPALLINPAGKGGWFKPSPKMLAQTQSKALANTSPAG 488
Query: 293 --------TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQ 344
LVVVG Y+IGKE + AI+K+L KIY N+ + V P L G L
Sbjct: 489 ASGDLGRGVLVVVGTYTIGKERIVKAIAKSLSSKIYCNSRKHAVFMCQADPTLHGMLTKD 548
Query: 345 GNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQ----LDLI-- 398
+HVLP+ + E+L +YL QY +L FRPTGWTY+ VG +D I
Sbjct: 549 PAAAQVHVLPLGQITIESLSEYLVLNQAQYDRILGFRPTGWTYTPPVGQNIAPTIDQILS 608
Query: 399 ------------RPLSRGN--ITIYGVPYSEHSSFTELREFV 426
RP N +TIYGVPYSEHSSF EL F
Sbjct: 609 QAQAHEYTASDLRPQRGSNPRVTIYGVPYSEHSSFRELTCFA 650
>gi|116192517|ref|XP_001222071.1| hypothetical protein CHGG_05976 [Chaetomium globosum CBS 148.51]
gi|88181889|gb|EAQ89357.1| hypothetical protein CHGG_05976 [Chaetomium globosum CBS 148.51]
Length = 830
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 156/316 (49%), Gaps = 50/316 (15%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFY+ +PG VDAFRYG+++GC AYFL+HFH DHY GL W+HGPIYCS +T
Sbjct: 428 RTCPFYRIMPGFSICVDAFRYGAVEGCQAYFLSHFHSDHYIGLTANWTHGPIYCSKVTGS 487
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI-----DGVKVTLLEANHCPGAALIHFRLQDG---QC 229
LV+ L Y+ +EL E + +GV VT++ ANHCPG++L F G Q
Sbjct: 488 LVKSQLKTAAKYV--VELEFEKTVPVPDTNGVMVTMIPANHCPGSSLFLFEKTTGGRTQR 545
Query: 230 YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK 289
LH GDFRA +P L V+ + T P + ++R +
Sbjct: 546 VLHCGDFRACPAHVEHPKLRPETVDAITGRTKQQKIDASSPMTTANGDTLLRRQRGGASA 605
Query: 290 QPKT--------------------------------------LVVVGAYSIGKESVFLAI 311
K LVV G YSIGKE + +AI
Sbjct: 606 SNKVVSKFFTTASSSTSTKPTPPPPNNAFAALNGRHHNSNRLLVVCGTYSIGKERICVAI 665
Query: 312 SKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYG 371
++AL KIYA ++ R+ + D PEL+ L + + +H+ + L+ ETL +YL Y
Sbjct: 666 AQALQTKIYATPAKIRMCKQLDDPELASLLTSNPTEAQVHMQMLMELRAETLSEYLSAYK 725
Query: 372 --NQYAAVLAFRPTGW 385
+++ ++ FRP+GW
Sbjct: 726 ARGEFSHIIGFRPSGW 741
>gi|225683182|gb|EEH21466.1| DNA cross-link repair protein pso2/snm1 [Paracoccidioides
brasiliensis Pb03]
Length = 881
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 180/398 (45%), Gaps = 119/398 (29%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K+ +R+CPFYK +PG VDAFRYG+++GC
Sbjct: 416 KQAYERTCPFYKILPGLSVCVDAFRYGAVEGC---------------------------- 447
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQC 229
+R L V+P +I +E + I GV+VT+L ANHCPG++L F + G+
Sbjct: 448 ------IRQQLKVDPEWITDIEWDEVFEIPETGGVQVTMLPANHCPGSSLFLFEKEVGKG 501
Query: 230 -------YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFP 270
LH GDFRAS +PLL ++V YLDTTY NPKY FP
Sbjct: 502 PKPKIHRILHCGDFRASPAHVRHPLLRPDVVDSLTGKTKQQTIDVCYLDTTYLNPKYAFP 561
Query: 271 SKEDVLNYVVRLTKNC--------------------------LKKQPKT----------- 293
++EDV+ + N L K P++
Sbjct: 562 NQEDVITACANVCANLDSNENKDVGQATHGPKTTAMKTMVDFLSKNPESQTQPGHQRSKS 621
Query: 294 ----LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
LVVVG YSIGKE + +AI++AL KIYA A+++R+ + ELSG L + +
Sbjct: 622 ADRLLVVVGTYSIGKERLCIAIARALNCKIYAPAAKQRICACLEDEELSGLLTSNPIEAQ 681
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG----------------- 392
+H+ + ++ ETL+DYL + ++ V+ F+PTGW Y G
Sbjct: 682 IHMQALMEVRAETLRDYLLSFRPHFSRVVGFQPTGWNYRPPAGRTTDSPPVSSVLYSDSW 741
Query: 393 ----NQLDLI-RPLSRGNITIYGVPYSEHSSFTELREF 425
N DLI + S T Y VPYSEHSSF EL F
Sbjct: 742 QSRFNARDLIPQRGSNPESTCYMVPYSEHSSFRELTMF 779
>gi|428183181|gb|EKX52039.1| hypothetical protein GUITHDRAFT_65538 [Guillardia theta CCMP2712]
Length = 367
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 166/317 (52%), Gaps = 27/317 (8%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH-GPIYCSPLTARLVRMCLLVNPSYIH 191
VD F+Y K A+FL+HFH DHY GL + + G IYC+ T LV L V +
Sbjct: 19 VDGFKYAD-KQVEAFFLSHFHGDHYDGLSENFDGPGRIYCTKTTGDLVVQELKVRKELVV 77
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNH 251
E + G KVT L+ANHCPGAAL+ F L+DG +LHTGD R + M+ YP LV
Sbjct: 78 CYEYGESAHVCGAKVTFLDANHCPGAALLLFELEDGTVHLHTGDMRYDKKMKEYPELVCR 137
Query: 252 R--VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ--------PKTLVVVGAYS 301
R ++ +YLDTTYC+PK+ FP ++ ++ + + Q + LV++ AY
Sbjct: 138 RGLIDRVYLDTTYCHPKHVFPGQDKSIDIIASDQEAIDGAQENRDGDDPSRRLVLLSAYK 197
Query: 302 IGKESVFLAISKALGVKIYANASRRRVLQSFDWPE--LSGNLCTQGNDTLLHVL------ 353
IGKE V +++ K+Y + ++ RV++ E LS C ++ +H+
Sbjct: 198 IGKERVICEVARRAKAKVYVDEAKMRVMRCLRMSEEDLSVFTCNM-RESQIHICRMGFAG 256
Query: 354 ---PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYG 410
P F ++ Y+K + + +AF PTGW S + L +GN ++
Sbjct: 257 DIWPFFRPNFVNIERYIKDNDLPFTSCMAFIPTGWADSSNYNKKNSL---QFKGNFSVKC 313
Query: 411 VPYSEHSSFTELREFVQ 427
VPYSEHS++ EL EFV+
Sbjct: 314 VPYSEHSNYNELVEFVE 330
>gi|358055743|dbj|GAA98088.1| hypothetical protein E5Q_04770 [Mixia osmundae IAM 14324]
Length = 979
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 111/188 (59%), Gaps = 13/188 (6%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
+K R CPFYK + G P VDAFRYG IKG AYFL+H H DHY L W+HGP+Y S
Sbjct: 413 RKSAPRPCPFYKVMEGMPIAVDAFRYGGIKGIKAYFLSHAHADHYTNLSGSWNHGPVYAS 472
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL--QDGQC- 229
T L+ L V P Y+HPL +T VI GV VTL++ANHCPG+ L F D +
Sbjct: 473 KTTCNLIVANLGVKPEYVHPLPFDTPTVIAGVTVTLIDANHCPGSCLFLFEAPHTDPKSP 532
Query: 230 ----------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYV 279
YLH GDFRAS + +P L R+++ YLDTTY NP+Y FP++E V++
Sbjct: 533 YSKTPSRIFRYLHCGDFRASPVHIRHPALAGKRIDICYLDTTYLNPRYTFPAQEQVVDAC 592
Query: 280 VRLTKNCL 287
L K +
Sbjct: 593 AALIKQRI 600
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 19/157 (12%)
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
K+ LV+VG YS+GKE +F I++ALG K+YAN + ++ D PEL L +
Sbjct: 769 KREHILVLVGTYSVGKEKIFKGIAQALGSKVYANEQKHKLFSCMDDPELHAMLTKDPFEA 828
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY--SETVGNQLDLIRPLSRGNI 406
+HV + ++K ETL++YL+ + + ++ R TGWT+ T + R +++G++
Sbjct: 829 QVHVTNLFAIKRETLEEYLEQFSRYFTKIIGIRGTGWTFRPDATEEKMPSVARVVAKGSM 888
Query: 407 -----------------TIYGVPYSEHSSFTELREFV 426
YGVPYSEHSSF EL F
Sbjct: 889 PFTPAYLYPQRDSTERYQAYGVPYSEHSSFYELTCFA 925
>gi|167515482|ref|XP_001742082.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778706|gb|EDQ92320.1| predicted protein [Monosiga brevicollis MX1]
Length = 194
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 136/201 (67%), Gaps = 9/201 (4%)
Query: 129 TPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPS 188
T F VDAF YG++ C+AYFL+HFHYDHYGGL R+ GP+YCS +TARLV+ + V P
Sbjct: 1 TSFVVDAFTYGAVPQCTAYFLSHFHYDHYGGLTARFDWGPLYCSAITARLVQSQIGVKPE 60
Query: 189 YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS-RLMQSYPL 247
+I + + I+G +VT+LEA+HCPGA L+ F + +G+ LHTGDFRA+ +++QS
Sbjct: 61 HIRIINPGNTYQIEGHRVTVLEADHCPGAVLLIFNV-NGRNVLHTGDFRATEQVLQS--- 116
Query: 248 LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ-PKTLVVVGAYSIGKES 306
L + ++ ++LDTTYCN KY FP E +L+ RL C K + P+TL + G Y+IGKE
Sbjct: 117 LQSFSIHTVHLDTTYCNEKYCFPRIETILS---RLQDICEKHRLPRTLFLCGTYTIGKER 173
Query: 307 VFLAISKALGVKIYANASRRR 327
VF AI + LG K + +++
Sbjct: 174 VFRAIVERLGAKFWCPKDKKK 194
>gi|388853130|emb|CCF53304.1| uncharacterized protein [Ustilago hordei]
Length = 878
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 116/191 (60%), Gaps = 21/191 (10%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+ PFYK + G P TVDAFR+G I+GC YFLTHFH DHYGG+ W+HGPIYCS TA
Sbjct: 253 RTAPFYKALEGMPLTVDAFRFGKIEGCRGYFLTHFHSDHYGGMTANWNHGPIYCSVTTAN 312
Query: 178 LVRMCLLVNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFR----------- 223
L R L V+P ++ PL + + GV VT +EANHCPG+ L F
Sbjct: 313 LCRTHLGVDPQWLRPLPMEVAVPVPDSGGVMVTCIEANHCPGSCLFLFEGPQTCQLLSRN 372
Query: 224 -----LQDGQC--YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
+ G+ YLH GDFRAS + ++P +V +++++YLDTTYCNP+Y FP+++ V+
Sbjct: 373 HATPYIGTGKIFRYLHCGDFRASPVHTNHPSIVGKKLDIIYLDTTYCNPRYCFPAQDQVI 432
Query: 277 NYVVRLTKNCL 287
L + +
Sbjct: 433 EACAELVRQIV 443
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 30/162 (18%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRR-RVLQSFDWPELSGNLCTQGNDTLL 350
+ LVV+G Y+IGKE + A+++A+ KI+ SR+ RV + PEL +L T+ +
Sbjct: 667 RLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLEDPELH-SLLTRSPSASV 725
Query: 351 HVLPMSSLKFETLKDY---LKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL------ 401
HV + ++ E L+D L+ G + +AFRPTGWTY + G +D + P
Sbjct: 726 HVANLHAINGEGLRDVVAALRTRGYDFTHAVAFRPTGWTYKPSAG--MDTVSPSLDRLVQ 783
Query: 402 -----------------SRGNITIYGVPYSEHSSFTELREFV 426
S + IYGVPYSEHSSF EL F
Sbjct: 784 WNQSRSFGPHNLFPTRDSTPDYMIYGVPYSEHSSFFELTAFA 825
>gi|73620753|sp|Q5QJC3.1|DCR1B_CHICK RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
gi|38731581|gb|AAR27405.1| SNM1B [Gallus gallus]
Length = 457
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 159/303 (52%), Gaps = 29/303 (9%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IPGTP VD + G +FL+H H DH GL WS P+YCSPLTARL+ L V
Sbjct: 6 IPGTPIAVDFWSVRRAGGARLFFLSHMHSDHTVGLSSTWSR-PLYCSPLTARLLHHRLKV 64
Query: 186 NPSYIHPLELNTEHVI-DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS 244
+I PLE+ H + + V VTLL+ANHCPG+ + F G L+TGDFR S MQ
Sbjct: 65 PTRWIRPLEVGQSHAVGEEVTVTLLDANHCPGSVMFLFEGAFG-TILYTGDFRYSPAMQR 123
Query: 245 YPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK 304
P L R++ LYLD T C P PS+ +L +++ P+ VV+G YS+GK
Sbjct: 124 EPALSGRRIDRLYLDNTNCRPHGALPSRSRAALQAAQL----IRRHPQHRVVIGVYSLGK 179
Query: 305 ESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLK 364
E + + ++ G + + SR ++ + PE+ T+ +H + ++ ++++TL
Sbjct: 180 EELLVDLALEFGTWVVVSPSRLEQMRLLELPEV---FTTEEGAGRIHAVDVAEIRWDTLV 236
Query: 365 DYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELRE 424
+ N +A PTG RP+ + I+ +PYS+HSSF+EL E
Sbjct: 237 SW-----NVLHPTIAILPTG--------------RPVKVTHPQIHLIPYSDHSSFSELCE 277
Query: 425 FVQ 427
FV+
Sbjct: 278 FVK 280
>gi|343428562|emb|CBQ72092.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 871
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 114/191 (59%), Gaps = 21/191 (10%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+ PFYK + G P TVDAFR+G I+GC YFLTHFH DHYGG+ W+HGPIYCS TA
Sbjct: 251 RTAPFYKALEGMPLTVDAFRFGKIEGCRGYFLTHFHSDHYGGMTANWNHGPIYCSVTTAN 310
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR-LQDGQC---- 229
L R L V+P ++ PL + + GV VT +EANHCPG+ L F Q Q
Sbjct: 311 LCRTHLGVDPQWLRPLPMEVAVAVPDSGGVMVTCIEANHCPGSCLFLFEGPQTSQLLSRN 370
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRAS + ++P + +++++YLDTTYCNP+Y FP+++ V+
Sbjct: 371 HASPYIGTGRIFRYLHCGDFRASPVHTNHPSIAGKKLDIIYLDTTYCNPRYCFPAQDQVI 430
Query: 277 NYVVRLTKNCL 287
L + +
Sbjct: 431 EACAELVRRIV 441
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 81/162 (50%), Gaps = 30/162 (18%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRR-RVLQSFDWPELSGNLCTQGNDTLL 350
+ LVV+G Y+IGKE + A+++A+ KI+ SR+ RV + PEL +L T+ +
Sbjct: 660 RLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLEDPELH-SLLTRSPSASV 718
Query: 351 HVLPMSSLKFETLKDY---LKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL------ 401
HV + ++ E L+D L+ G + +AFRPTGWTY G LD + P
Sbjct: 719 HVTNLHAINGEGLRDVVAALRTRGYDFTHAVAFRPTGWTYKPPAG--LDTVSPSLDRLIQ 776
Query: 402 -----------------SRGNITIYGVPYSEHSSFTELREFV 426
S + IYGVPYSEHSSF EL F
Sbjct: 777 WNQARSFGCQNLYPTRDSTPDYMIYGVPYSEHSSFFELTAFA 818
>gi|443899503|dbj|GAC76834.1| predicted hydrolase involved in interstrand cross-link repair
[Pseudozyma antarctica T-34]
Length = 863
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 116/194 (59%), Gaps = 21/194 (10%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+ PFYK + G P TVDAFR+G I+GC YFLTHFH DHYGG+ W+HG IYCS TA
Sbjct: 251 RTAPFYKALEGMPLTVDAFRFGKIEGCRGYFLTHFHSDHYGGMTSNWNHGLIYCSVTTAN 310
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR-LQDGQC---- 229
L R L V+P ++ PL + I GV+VT +EANHCPG+ L F Q Q
Sbjct: 311 LCRTHLGVDPQWLRPLPMEVAVPIPDSGGVQVTCIEANHCPGSCLFLFEGPQTAQLLSRS 370
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRAS + S+P + +++++YLDTTYCNP+Y FP+++ V+
Sbjct: 371 HASPHIGTRRIFRYLHCGDFRASPVHTSHPSIAGKKLDIIYLDTTYCNPRYCFPAQDQVI 430
Query: 277 NYVVRLTKNCLKKQ 290
L + + ++
Sbjct: 431 EACAELVRRLVPEE 444
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 30/162 (18%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRR-RVLQSFDWPELSGNLCTQGNDTLL 350
+ LVV+G Y+IGKE + A+++A+ KI+ SR+ RV + PEL L T+ +
Sbjct: 652 RLLVVIGTYTIGKERIVKAVARAMHSKIFCMDSRKYRVYAQLEDPELHAML-TRDPGAAV 710
Query: 351 HVLPMSSLKFETLKDY---LKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL------ 401
HV + ++ E L+D L+ G+ + +AFRPTGWTY G +D + P
Sbjct: 711 HVTNLHAINGEGLRDVVAALRTRGHNFTHAVAFRPTGWTYRPPAG--MDTVSPSLERLVQ 768
Query: 402 -----------------SRGNITIYGVPYSEHSSFTELREFV 426
S + IYGVPYSEHSSF EL F
Sbjct: 769 WNQSRSFGPQNLYPTRDSTPDYMIYGVPYSEHSSFFELTAFA 810
>gi|453089242|gb|EMF17282.1| DRMBL-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 911
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 120/196 (61%), Gaps = 25/196 (12%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL W+HGPIYCS +TA
Sbjct: 442 RTCPFYKILPGLFICVDAFRYGAVQGCQAYFLSHFHSDHYIGLTSTWTHGPIYCSKVTAN 501
Query: 178 LVRMCLLVNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFR-----LQDG-- 227
LV+ L V+P Y+ PLE + + GVKVT++ ANHCPG++L F Q+G
Sbjct: 502 LVKQQLRVDPIYVVPLEFEQQVEVPGTRGVKVTMISANHCPGSSLYLFEKTLGVKQNGEA 561
Query: 228 --QCYLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFPSKE 273
Q LH GDFRA ++ +PLL+ +++V YLDTTY NPKY FP +E
Sbjct: 562 RAQRILHCGDFRACKMHIEHPLLMPDVLDKVSGKTKEQKIDVCYLDTTYLNPKYAFPDQE 621
Query: 274 DVLNYVVRLTKNCLKK 289
V+ + CL K
Sbjct: 622 SVIKACADMCV-CLSK 636
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 81/160 (50%), Gaps = 22/160 (13%)
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND 347
K + + LVVVG YSIGKE + L I++AL KIYA S++R++ + + EL + +
Sbjct: 703 KARGRLLVVVGTYSIGKERICLGIARALNSKIYAPPSKQRIVAALEDAELEARMTKDPKE 762
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL---------- 397
+H+ P+ ++ +TL DYLK + + + FRP+GW Y D
Sbjct: 763 AQVHMTPLFEIRADTLDDYLKDFWPHFTRAVGFRPSGWNYKPPKSRFTDSPLVSTVLQSD 822
Query: 398 -------IRPL-----SRGNITIYGVPYSEHSSFTELREF 425
+R L S + +GVPYSEHSSF EL F
Sbjct: 823 NWKSTYSMRELVPQRGSSSRASCFGVPYSEHSSFRELTVF 862
>gi|71006690|ref|XP_758011.1| hypothetical protein UM01864.1 [Ustilago maydis 521]
gi|46097512|gb|EAK82745.1| hypothetical protein UM01864.1 [Ustilago maydis 521]
Length = 866
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 113/191 (59%), Gaps = 21/191 (10%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+ PFYK + G P TVDAFR+G I+GC YFLTHFH DHYGG+ W+HGPIYCS TA
Sbjct: 247 RTAPFYKALEGMPLTVDAFRFGKIEGCRGYFLTHFHSDHYGGMTANWNHGPIYCSVTTAN 306
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR-LQDGQC---- 229
L R L V+P ++ PL + + GV VT +EANHCPG+ L F Q Q
Sbjct: 307 LCRTHLGVDPQWLRPLPMEVAVPVPDSGGVMVTCIEANHCPGSCLFLFEGPQTSQLLSRN 366
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRAS ++P + +++++YLDTTYCNP+Y FP+++ V+
Sbjct: 367 HASPYIGTGRIFRYLHCGDFRASPAHTNHPSVAGKKLDIIYLDTTYCNPRYCFPAQDQVI 426
Query: 277 NYVVRLTKNCL 287
L + +
Sbjct: 427 EACAELVRRIV 437
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 30/162 (18%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRR-RVLQSFDWPELSGNLCTQGNDTLL 350
+ LVV+G Y+IGKE + A+++A+ KI+ SR+ RV + PEL ++ T+ +
Sbjct: 655 RLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLEDPELH-SMLTRSPLASV 713
Query: 351 HVLPMSSLKFETLKDY---LKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL------ 401
HV + ++ E L+D L+ +G+ + +AFRPTGWTY G +D + P
Sbjct: 714 HVTNLHAINGEALRDVVAALRTHGHDFTHAVAFRPTGWTYKPPAG--MDTVSPSLDRLIQ 771
Query: 402 -----------------SRGNITIYGVPYSEHSSFTELREFV 426
S + IYGVPYSEHSSF EL F
Sbjct: 772 WNQSRSFTFHNLLPTRDSTPDYMIYGVPYSEHSSFFELTAFA 813
>gi|254577503|ref|XP_002494738.1| ZYRO0A08514p [Zygosaccharomyces rouxii]
gi|238937627|emb|CAR25805.1| ZYRO0A08514p [Zygosaccharomyces rouxii]
Length = 490
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 183/386 (47%), Gaps = 72/386 (18%)
Query: 111 HLKKIVDRSCPFYKK------IPGTPFT--------VDAFRYGSIKGCSAYFLTHFHYDH 156
H +K +D++ P KK +PGT VD F Y YFL+HFH DH
Sbjct: 68 HAQKCLDKA-PEPKKPKTRPPLPGTKIVKLFSLQIVVDGFAYDRHGDIEHYFLSHFHSDH 126
Query: 157 YGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTE-HVIDGVKVTLLEANHCP 215
YGGL K W++G IY S +T LVR ++ S + PL +N + + D V V LL+ANHCP
Sbjct: 127 YGGLKKSWTNGIIYASSITINLVRDKFKIDGSRLRPLPMNEKIWITDKVSVVLLDANHCP 186
Query: 216 GAALIHFRLQDG----QCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPS 271
GA + F D + LHTGDFRA+ + R++ +YLDTTY P + FPS
Sbjct: 187 GAVVFLFEEYDNDAVVKTVLHTGDFRANNKLIEEVKRWTTRLDEVYLDTTYLIPGFHFPS 246
Query: 272 KEDVLNYVVRLTKNCLK----------------------KQPKTLVVVGAYSIGKESVFL 309
+E VL K+ + K K L +VG Y+IGKE + +
Sbjct: 247 QESVLEVTSNFAKDLVNRGFQSIFQNDQKSIVNYTHQSPKLYKLLFLVGTYTIGKEKLAI 306
Query: 310 AISKALGVKIY--ANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF-ETLKDY 366
++++ LG KI+ A R R++ + SG + ++ +H++P+ L ++++ Y
Sbjct: 307 SLAQVLGTKIFIPAGTPRHRMISQYMEYFPSGLITHDVKESCVHLVPLRILNSKDSIQSY 366
Query: 367 LKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGN--------------------- 405
+ Y + Y V+ F PTGWT++ + + LSR +
Sbjct: 367 FQNYSSIYEDVVGFIPTGWTFTSKWAKKPEFSTILSRMDYCKEVLHNTQDALDINFVLKQ 426
Query: 406 ------ITIYGVPYSEHSSFTELREF 425
++ VPYSEHSSF +L F
Sbjct: 427 FKKYQRFQVFKVPYSEHSSFKDLVNF 452
>gi|145351984|ref|XP_001420339.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580573|gb|ABO98632.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 368
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 165/322 (51%), Gaps = 28/322 (8%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGL----GKRWSHGPIYCSPLTARLVRMCLLVNPS 188
VD F + S Y LTHFH DHY GL GK IYCS +TARLV L V
Sbjct: 21 VDGFAFQS-PDVRCYVLTHFHADHYCGLSGSFGKDGDEAKIYCSEITARLVVEFLGVKRE 79
Query: 189 YIHPLELNTEHVIDG-------VKVTLLEANHCPGAALIHFRLQ-DGQCYLHTGDFRASR 240
+ EL + G V+ T ++ANHCPGA L+ FR + G+ LHTGDFRA+
Sbjct: 80 RVVGCELGRGTTLRGAGTRGDDVEATFVDANHCPGACLVFFRNKITGETLLHTGDFRAAA 139
Query: 241 LMQS----YPLLVNHR---VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+++ LL R V+ + LDTTYC K+ FP ++ VLN + ++ ++ L ++P+T
Sbjct: 140 RVRNDGTLRELLTTCRDGSVDEVMLDTTYCEKKWTFPDQDVVLNKMRQIARDELAREPRT 199
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLC-----TQGNDT 348
L + G+YSIGKE A+ + + A R++ L+ W +C +
Sbjct: 200 LFLCGSYSIGKERAIQAVCQGAQSRASVTARRKKSLELSGWWRDDAFVCEDDDAEEAARC 259
Query: 349 LLHVLPMS-SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL--SRGN 405
+ V + + + + ++ A +AF PTGW+Y++ + + P + G
Sbjct: 260 QVRVCGLGKGSNHRAMMEIMAKEAPRWRAAVAFSPTGWSYTKKMDEDGFNVNPWIENEGR 319
Query: 406 ITIYGVPYSEHSSFTELREFVQ 427
Y +PYSEHSS+TELREF++
Sbjct: 320 TRTYAIPYSEHSSYTELREFIK 341
>gi|320582723|gb|EFW96940.1| DNA repair protein Pso2/Snm1, putative [Ogataea parapolymorpha
DL-1]
Length = 452
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 163/339 (48%), Gaps = 45/339 (13%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCLLVNPSY 189
VDAF Y S Y LTHFH DHYGGL K W HG I +P+T L+ VNP
Sbjct: 82 IAVDAFCYAPHPAISVYLLTHFHSDHYGGLTKNWDHGSVIIVTPITRNLLVYKFGVNPDL 141
Query: 190 IHPLELNTEHVI--DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPL 247
+ ++ N + +K+T L+ANHCPG+ + G YLH GD R ++ M +
Sbjct: 142 LLSVDYNQTIEVPHTDLKITCLDANHCPGSGIFVIE-SPGLRYLHCGDCRINKPMLESLM 200
Query: 248 LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL----------------KKQP 291
+ R + +YLDTTY NP Y FP +E V++ + +L ++ + +K
Sbjct: 201 QIG-RFHKIYLDTTYLNPLYNFPKQEIVIDELCKLLQSKMETMQFSQQRVIDFFVDRKPQ 259
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL-L 350
K L+V+G Y IGKE + + +++AL KIY N ++ VL F WP L L T ++ +
Sbjct: 260 KFLIVIGTYLIGKERLAIKLAEALQTKIYCNEEKKNVLSQFGWPNLDNLLDTHNPESCQI 319
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS---------------------E 389
H+ + L + L + LK Y + A + RPTGW+
Sbjct: 320 HLAALPKLNKDYLAEQLKTYSRHFKAAIGIRPTGWSVRYGKPVPSLDAMVAAESPEMVYA 379
Query: 390 TVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
+ D R ++ + +PYSEHSS+ EL F +
Sbjct: 380 AISKHFDRFREDNKARVL--QIPYSEHSSYRELFYFANL 416
>gi|347921037|ref|NP_001026671.2| 5' exonuclease Apollo [Gallus gallus]
Length = 504
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 158/303 (52%), Gaps = 29/303 (9%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IPGTP VD + G +FL+H H DH GL S P+YCSPLTARL+ L V
Sbjct: 53 IPGTPIAVDFWSVRRAGGARLFFLSHMHSDHTVGLSST-SFSPLYCSPLTARLLYHRLKV 111
Query: 186 NPSYIHPLELNTEHVI-DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS 244
+I PLE+ H + + V VTLL+ANHCPG+ + F G L+TGDFR S MQ
Sbjct: 112 PTRWIRPLEVGQSHAVGEEVTVTLLDANHCPGSVMFLFEGAFG-TILYTGDFRYSPAMQR 170
Query: 245 YPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK 304
P L R++ LYLD T C P PS+ +L +++ P+ VV+G YS+GK
Sbjct: 171 EPALSGRRIDRLYLDNTNCRPHGALPSRSRAALQAAQL----IRRHPQHRVVIGVYSLGK 226
Query: 305 ESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLK 364
E + + ++ G + + SR ++ + PE+ T+ +H + ++ ++++TL
Sbjct: 227 EELLVDLALEFGTWVVVSPSRLEQMRLLELPEV---FTTEEGAGRIHAVDVAEIRWDTLV 283
Query: 365 DYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELRE 424
+ N +A PTG RP+ + I+ +PYS+HSSF+EL E
Sbjct: 284 SW-----NVLHPTIAILPTG--------------RPVKVTHPQIHLIPYSDHSSFSELCE 324
Query: 425 FVQ 427
FV+
Sbjct: 325 FVK 327
>gi|116267959|ref|NP_001070751.1| 5' exonuclease Apollo [Danio rerio]
gi|115528190|gb|AAI24810.1| Zgc:154089 [Danio rerio]
Length = 571
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 159/311 (51%), Gaps = 35/311 (11%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K +P TP VD ++ +FL+H H DH GL WSH PIYCSPLTA+L+R+ L
Sbjct: 4 KVLPDTPIAVDCWQLRKCLHVRLFFLSHMHSDHTCGLSSTWSHRPIYCSPLTAKLLRLKL 63
Query: 184 LVNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+ +I PLE+ +H++ + + V L++ANHCPGA + F+ G L+TGDF
Sbjct: 64 QIKQKWIRPLEIGQDHMLMLDDLGKERLTVNLIDANHCPGAVMFLFQGYFG-TRLYTGDF 122
Query: 237 RASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
R + M P L NH ++VLYLD T C+P PS++ +L K ++ P V
Sbjct: 123 RYTPSMLRVPCLQNHINIDVLYLDNTNCDPTRALPSRQQ----ATQLIKQIIRDHPGYAV 178
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V+G YS+GKES+ + + A+ K + R R L++ +L T + V+
Sbjct: 179 VIGLYSLGKESLLVDL--AMEFKTWVEVDRER-LETLRVLQLPDVFTTDSGAGRIRVVNQ 235
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
S + L + N+ + +A PT RP+ + +Y VPYS+
Sbjct: 236 SMINASNLMAW-----NKLQSTIAILPTS--------------RPMVSCHPNVYVVPYSD 276
Query: 416 HSSFTELREFV 426
HSS+ EL +FV
Sbjct: 277 HSSYQELEDFV 287
>gi|449297636|gb|EMC93654.1| hypothetical protein BAUCODRAFT_76521 [Baudoinia compniacensis UAMH
10762]
Length = 649
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 117/196 (59%), Gaps = 28/196 (14%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL WSHGPIYCS
Sbjct: 172 KPAYQRTCPFYKILPGLFICVDAFRYGAVQGCQAYFLSHFHSDHYIGLTSSWSHGPIYCS 231
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDG 227
+TA LVR L V+P Y+ ++L E I+ GVKVT++ ANHCPG++L F G
Sbjct: 232 HVTANLVRQQLRVDPKYV--VDLEFEQPIEVPGTRGVKVTMIPANHCPGSSLYLFEKVVG 289
Query: 228 ---------QCYLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPK 266
Q LH GDFRA R +PLL+ +++V YLDTTY NPK
Sbjct: 290 KKTNGEPRLQRILHCGDFRACRAHIEHPLLMPEVQDKISGKTREQKIDVCYLDTTYLNPK 349
Query: 267 YKFPSKEDVLNYVVRL 282
Y FPS++ V+ +
Sbjct: 350 YAFPSQQTVIKACAEM 365
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 84/156 (53%), Gaps = 22/156 (14%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
+ LVVVG YSIGKE + L I+KAL KIYA S+ R++ + + PEL+ + +H
Sbjct: 445 RLLVVVGTYSIGKERICLGIAKALNSKIYAPPSKMRIVSALEDPELNARMTGDPRAAQVH 504
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY---------SETVGNQL------- 395
+ P+ ++ ETL DYLK Y + + FRP+GW Y S ++ + L
Sbjct: 505 MTPLFEIRAETLDDYLKDYFPHFTRAVGFRPSGWNYRPPTSRFLESPSIASVLNGDNWKS 564
Query: 396 -----DLI-RPLSRGNITIYGVPYSEHSSFTELREF 425
DL+ + S + +GVPYSEHSSF EL F
Sbjct: 565 IYSMKDLVPQRGSTSRASCFGVPYSEHSSFRELTMF 600
>gi|226479044|emb|CAX73017.1| DNA cross-link repair 1A protein [Schistosoma japonicum]
Length = 345
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 149/264 (56%), Gaps = 20/264 (7%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CPFYK IP T TVDAF Y I GC+ YFL+HFH DH+ G+ K + G IYCS +T
Sbjct: 56 KKCPFYKWIPDTSITVDAFCYNDIPGCTYYFLSHFHSDHFKGIHKNFK-GHIYCSEVTKN 114
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR-LQDGQCYLHTGDF 236
L+R + I LEL +I V+VT L+ANHCPG+ + F L + YLHTGDF
Sbjct: 115 LLRDAYGLGL-VISVLELEKRTLIGDVEVTALDANHCPGSLMFIFHVLSSRKTYLHTGDF 173
Query: 237 RASRLMQSYPL-LVNH----------RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKN 285
R + M ++P L N+ R++ ++LDTTYC+ +Y FP++ DV++ V +T+N
Sbjct: 174 RYTPEMLAHPSSLTNYLSENSAKHLSRIHSVFLDTTYCSSQYDFPTQVDVIHGAVEITRN 233
Query: 286 CLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW------PELSG 339
L K P LV+ G YSIGKE ++ L +K++ +++ R+++ EL
Sbjct: 234 YLIKDPTVLVICGMYSIGKERFVHGLTSELNLKVWLPSNQSRLVKLAAQGSCKVCKELLQ 293
Query: 340 NLCTQGNDTLLHVLPMSSLKFETL 363
+ + LHVLPM L L
Sbjct: 294 YVVDNPHKAQLHVLPMQQLNLSGL 317
>gi|306755663|sp|B0V2S2.1|DCR1B_DANRE RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
Length = 571
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 158/311 (50%), Gaps = 35/311 (11%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K +P TP VD ++ +FL+H H DH GL WSH PIYCSPLTA+L+R+ L
Sbjct: 4 KVLPDTPIAVDCWQLRKCLHVRLFFLSHMHSDHTCGLSSTWSHRPIYCSPLTAKLLRLKL 63
Query: 184 LVNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+ +I PLE+ +H++ + + V L++ANHCPGA + F+ G L+TGDF
Sbjct: 64 QIKQKWIRPLEIGQDHMLMLDDLGKERLTVNLIDANHCPGAVMFLFQGYFG-TRLYTGDF 122
Query: 237 RASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
R + M P L NH ++VLYLD T C+P PS++ + K ++ P V
Sbjct: 123 RYTPSMLRVPCLQNHINIDVLYLDNTNCDPTRALPSRQQATQQI----KQIIRDHPGYAV 178
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V+G YS+GKES+ + + A+ K + R R L++ +L T + V+
Sbjct: 179 VIGLYSLGKESLLVDL--AMEFKTWVEVDRER-LETLRVLQLPDVFTTDSGAGRIRVVNQ 235
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
S + L + N+ + +A PT RP+ + +Y VPYS+
Sbjct: 236 SMISASNLMAW-----NKLQSTIAILPTS--------------RPMVSCHPNVYVVPYSD 276
Query: 416 HSSFTELREFV 426
HSS+ EL +FV
Sbjct: 277 HSSYQELEDFV 287
>gi|350596085|ref|XP_003360736.2| PREDICTED: DNA cross-link repair 1A protein-like [Sus scrofa]
Length = 964
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 113/164 (68%), Gaps = 3/164 (1%)
Query: 99 KLKASNGKS-TATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHY 157
+L+ N K+ +++ K+ R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY
Sbjct: 697 RLQRGNTKTPESSNAGKLRKRTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHY 756
Query: 158 GGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGA 217
GL K ++ P+YCS +T L++ L V YIHPL ++TE V++GVKV LL+ANHCPGA
Sbjct: 757 AGLSKNFTF-PVYCSEVTGNLLKSKLHVQEQYIHPLPIDTECVVNGVKVVLLDANHCPGA 815
Query: 218 ALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTT 261
++ F L + DFRA M+ LL +V+ LYLDTT
Sbjct: 816 VMVLFHLPNXXXXXXXXDFRADPTMERS-LLAGQKVHTLYLDTT 858
>gi|308809469|ref|XP_003082044.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
gi|116060511|emb|CAL55847.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
Length = 607
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 173/354 (48%), Gaps = 47/354 (13%)
Query: 120 CPFYKKIPGTPFT---VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS----------- 165
C K++ F VD F + S A LTHFH DHY GL +
Sbjct: 5 CGAIKRLRAPAFAGVVVDGFNFQSPDDV-ARVLTHFHADHYCGLTSSYGRAETTTRATTT 63
Query: 166 ------------HGP-IYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDG--VKVTLLE 210
P IYCS +TARLV L V S + LE+ ++ ++VT ++
Sbjct: 64 GDGVDASSAIDGRAPKIYCSKITARLVIEVLGVRASRVEALEVGETTILGDTEIEVTFID 123
Query: 211 ANHCPGAALIHFR-LQDGQCYLHTGDFRASR-------LMQSYPLLVNHRVNVLYLDTTY 262
ANHCPGA L+ FR ++ + LHTGDFRA+R L + V+ + ++LDTTY
Sbjct: 124 ANHCPGACLVFFRNVRTNETLLHTGDFRAARRVREDVHLARCLARCVDGGPDEVHLDTTY 183
Query: 263 CNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
C K+ FP ++ VL + ++ + K++P+TL + G+YS+GKE A+ + +
Sbjct: 184 CEKKWTFPDQDVVLEAMRKIAEEESKREPRTLFLCGSYSVGKERAIRAVCQGARTRASVT 243
Query: 323 ASRRRVLQSFDWPELSGNLCTQGN-----DTLLHVLPM-SSLKFETLKDYLKPYGNQYAA 376
+ R+R L +W +C N + V + + D +K ++ A
Sbjct: 244 SRRKRSLVLSEWWRDDLFVCEDDNPEEAARCRVRVCGLGKGSNHRAMMDIIKNEAPRWGA 303
Query: 377 VLAFRPTGWTYSETVGNQLDL-IRPL--SRGNITIYGVPYSEHSSFTELREFVQ 427
V+AF PTGW+Y +++ + + P + G Y VPYSEHSS+TELREF++
Sbjct: 304 VVAFSPTGWSYRKSMEKDGEFRVEPWIENEGRTRTYAVPYSEHSSYTELREFIK 357
>gi|341038670|gb|EGS23662.1| eukaryotic translation initiation factor 3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1494
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 109/184 (59%), Gaps = 19/184 (10%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK +PG VDAFRYG++KGC AYFL+HFH DHY GL W+HGPIYCS +T
Sbjct: 1006 RTCPFYKIMPGFSICVDAFRYGAVKGCKAYFLSHFHSDHYMGLTANWTHGPIYCSKVTGS 1065
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR--LQDG--QCY 230
LV+ L Y+ LE NT + DGV VT++ ANHCPG+++ F L G Q
Sbjct: 1066 LVKSQLRTAAKYVVELEFNTTVAVPDTDGVTVTMIPANHCPGSSMFLFEKILSGGRVQRI 1125
Query: 231 LHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNY 278
LH GDFRA +PLL +++V YLDTTY NP+Y FP + DV+
Sbjct: 1126 LHCGDFRACPAHVEHPLLKPETVDAISSRTKQQKIDVCYLDTTYLNPRYSFPPQSDVIRA 1185
Query: 279 VVRL 282
L
Sbjct: 1186 CAEL 1189
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 36/172 (20%)
Query: 290 QPKT--LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND 347
QP+ LVV G YSIGKE + + I++AL KIYA ++ R+ + D PEL+ L + +
Sbjct: 1255 QPRNRLLVVCGTYSIGKERICVGIAQALQTKIYAAPAKLRMCRQLDDPELTALLTSDPRE 1314
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG------------NQL 395
+H+ + + +TL YL+ + ++ ++ FRP+GW + +V N L
Sbjct: 1315 AQVHMHALMDINADTLAQYLQGFKGHFSKIVGFRPSGWNFRPSVSKSAPKNLANLPPNSL 1374
Query: 396 ------------------DLIRPLSRGNIT---IYGVPYSEHSSFTELREFV 426
DL+ P GN T + VPYSEHSSF EL F+
Sbjct: 1375 PTTQLLHSPQWRPQITARDLV-PQRGGNATEAMCFAVPYSEHSSFRELALFL 1425
>gi|50311643|ref|XP_455848.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644984|emb|CAG98556.1| KLLA0F17094p [Kluyveromyces lactis]
Length = 513
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 181/363 (49%), Gaps = 64/363 (17%)
Query: 118 RSCPFYKKIPGTPFTV--DAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG-PIYCSPL 174
+S ++KK+ + TV D+F YFL+HFH DHYGGL K WSHG IY S
Sbjct: 119 KSMAWFKKLSFSDITVVVDSFNCDKEPNIDLYFLSHFHADHYGGLKKSWSHGTTIYTSVY 178
Query: 175 TARLVRMCLLVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFR-LQDGQCYLH 232
TA LV+ VN + L LN H V + V+V LL+ANHCPG+ + F L+ LH
Sbjct: 179 TANLVKWKFKVNQCKLIGLSLNEWHSVSNEVRVILLDANHCPGSVIFLFHDLRRNSFVLH 238
Query: 233 TGDFRASR--LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSK----EDVLNYVVRLTKNC 286
TGDFRA+ + + LL + ++++YLDTTY NP +KFP+ E ++ L +N
Sbjct: 239 TGDFRANERIITEVNSLLQGNSLSLIYLDTTYLNPFFKFPALPKVCEVTADFASLLAENG 298
Query: 287 LK-------------------KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRR 327
L + L VV +YSIGKE + ++I+K L ++Y ++ +
Sbjct: 299 LNTFLNRSDSQRSISQYLGLSQTKPILFVVLSYSIGKEHLAISIAKKLKTQLYVPHTKYQ 358
Query: 328 VLQSF-DW-PELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGW 385
+++ + W PE G L T + +H++ M + L YL N + +++ FRPTGW
Sbjct: 359 LVKQYISWFPE--GLLTTDHKSSNVHLVAMHT----DLDKYLSQLSNMFDSIVVFRPTGW 412
Query: 386 TYSET----------------VGNQLDLIRPL----------SRGNITIYGVPYSEHSSF 419
T+S V + L P S+G I + VPYSEHSSF
Sbjct: 413 TFSNQYDKSYTLWDEFERKNWVKDTLSGETPFAIDYFTKQKRSQGKIYHFNVPYSEHSSF 472
Query: 420 TEL 422
+L
Sbjct: 473 KDL 475
>gi|346979369|gb|EGY22821.1| DNA cross-link repair protein pso2/snm1 [Verticillium dahliae
VdLs.17]
Length = 922
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 112/189 (59%), Gaps = 26/189 (13%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K +R+CPFYK +PG VDAFRYG++KGC AYFL+HFH DHY GL W+HGPIYCS
Sbjct: 418 KAAYERTCPFYKIMPGFNICVDAFRYGAVKGCQAYFLSHFHSDHYIGLTAHWTHGPIYCS 477
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDG 227
+T L M L V P +I + L+ E ++ GV VT++ ANHCPG++L F G
Sbjct: 478 KVTGDLCIMQLKVAPKWI--VALDFEETVEVPGTGGVMVTMIPANHCPGSSLFLFEKPHG 535
Query: 228 -------QCYLHTGDFRASRLMQSYPL------------LVNHRVNVLYLDTTYCNPKYK 268
Q YLH GDFRA +PL L R+++ YLDTTY NP+Y
Sbjct: 536 KGANVKKQRYLHCGDFRACPAHVEHPLLKPDVQDAITGKLKQQRIDLCYLDTTYLNPRYS 595
Query: 269 FPSKEDVLN 277
FP +EDV+
Sbjct: 596 FPPQEDVIR 604
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 40/182 (21%)
Query: 285 NCLKKQPKT-----LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSG 339
N +K+P T LV+ G YSIGKE + +AI++AL KI+A+ ++ R+ PEL+
Sbjct: 669 NVKEKKPPTCRQRLLVICGTYSIGKERICIAIARALKTKIFASPAKIRICSKLGDPELTS 728
Query: 340 NLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIR 399
L + + +H+ + ++ ETL+DYL Y ++ ++ FRP+GW+Y +
Sbjct: 729 LLTSDPLEAQVHMQMLMEIRAETLQDYLDSYRPHFSRIVGFRPSGWSYRPAPASTGATAA 788
Query: 400 PLSRGNIT-----------------------------------IYGVPYSEHSSFTELRE 424
L+ N +GVPYSEHSSF EL
Sbjct: 789 SLTSANTAPGTVATTQILHSMAWRSRFTAQSVVPQRGSTREAMCFGVPYSEHSSFRELAM 848
Query: 425 FV 426
FV
Sbjct: 849 FV 850
>gi|302414560|ref|XP_003005112.1| DNA cross-link repair protein pso2/snm1 [Verticillium albo-atrum
VaMs.102]
gi|261356181|gb|EEY18609.1| DNA cross-link repair protein pso2/snm1 [Verticillium albo-atrum
VaMs.102]
Length = 896
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 112/188 (59%), Gaps = 26/188 (13%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K +R+CPFYK +PG VDAFRYG++KGC AYFL+HFH DHY GL W+HGPIYCS
Sbjct: 413 KAAYERTCPFYKIMPGFNICVDAFRYGAVKGCQAYFLSHFHSDHYIGLTAHWTHGPIYCS 472
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDG 227
+T L M L V P +I + L+ E ++ GV VT++ ANHCPG++L F G
Sbjct: 473 KVTGDLCIMQLKVAPKWI--VALDFEETVEVPGTGGVMVTMIPANHCPGSSLFLFEKPHG 530
Query: 228 -------QCYLHTGDFRASRLMQSYPL------------LVNHRVNVLYLDTTYCNPKYK 268
Q YLH GDFRA +PL L R+++ YLDTTY NP+Y
Sbjct: 531 KGANVKKQRYLHCGDFRACPAHVEHPLLKPDVQDAITGKLKQQRIDLCYLDTTYLNPRYS 590
Query: 269 FPSKEDVL 276
FP +EDV+
Sbjct: 591 FPPQEDVI 598
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 270 PSKEDVLNYVVRLTKNCLKKQPKT-----LVVVGAYSIGKESVFLAISKALGVKIYANAS 324
P+ + + N +K+P T LV+ G YSIGKE + +AI++AL KI+A+ +
Sbjct: 649 PASDSAKDGTADFFTNVKEKKPPTCRQRLLVICGTYSIGKERICIAIARALKTKIFASPA 708
Query: 325 RRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTG 384
+ R+ PEL+ L + + +H+ + ++ ETL+DYL Y ++ ++ FRP+G
Sbjct: 709 KIRICSKLGDPELTSLLTSDPLEAQVHMQMLMEIRAETLQDYLDSYRPHFSRIVGFRPSG 768
Query: 385 WTY 387
W+Y
Sbjct: 769 WSY 771
>gi|367016809|ref|XP_003682903.1| hypothetical protein TDEL_0G03250 [Torulaspora delbrueckii]
gi|359750566|emb|CCE93692.1| hypothetical protein TDEL_0G03250 [Torulaspora delbrueckii]
Length = 525
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 174/360 (48%), Gaps = 63/360 (17%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNP 187
G VD F + G + YFL+HFH DHY GL K W HG IY S +T L+ ++
Sbjct: 129 GYKVVVDGFNFEKDSGINQYFLSHFHSDHYMGLRKSWDHGTIYGSQITVDLMVSKFNMSR 188
Query: 188 SYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDG------QCYLHTGDFRAS- 239
+ L ++ E V + + V LL+ANHCPGA + F+ D + LHTGDFR++
Sbjct: 189 DLVRVLPMDRETWVTETISVILLDANHCPGATVFLFQEWDSTRQTVIKQILHTGDFRSNP 248
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP-------- 291
L+ + R+N +YLDTTY P + FP++ VL + + ++K
Sbjct: 249 ELIAKLNSICTSRINQVYLDTTYLIPGFHFPTQNSVLEVTAQFAFDLVQKGIRNYFNDSQ 308
Query: 292 --------------KTLVVVGAYSIGKESVFLAISKALGVKIY--ANASRRRVLQSFDWP 335
K L +VG Y+IGKE + +AI++AL KIY +SR +++ ++
Sbjct: 309 QSIFKFVRRKESLFKCLFLVGTYTIGKEKLAIAIAQALKTKIYIPKKSSRFKIISNYT-S 367
Query: 336 ELSGNLCTQG-NDTLLHVLPMSSLKF-ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGN 393
+L T ++ +H++P+S+L+ E+++ Y K Y + Y + F PTGWTY+ +
Sbjct: 368 YFPKDLITHDLQESCVHLVPLSTLRSKESIEAYFKDYSSVYDDAVGFIPTGWTYTNKYAH 427
Query: 394 QLDLIRPLSR----------------------------GNITIYGVPYSEHSSFTELREF 425
DL SR G ++ VPYSEHSSF +L F
Sbjct: 428 APDLPTIESRIQYCRDLLKDDSKNTLELKFITRQYKQHGKYQVFRVPYSEHSSFKDLVLF 487
>gi|159479866|ref|XP_001698007.1| hypothetical protein CHLREDRAFT_176829 [Chlamydomonas reinhardtii]
gi|158273806|gb|EDO99592.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1384
Score = 168 bits (425), Expect = 5e-39, Method: Composition-based stats.
Identities = 124/375 (33%), Positives = 176/375 (46%), Gaps = 100/375 (26%)
Query: 119 SCPFYKKIPGT--PFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
+ P +K IPGT TVDAFRY G AYFLTH H DHY GL + W GP+YCS LTA
Sbjct: 34 TVPAHKVIPGTGGAVTVDAFRYAH-PGVKAYFLTHAHSDHYTGLSEAWCAGPVYCSELTA 92
Query: 177 RLVRMCLLVNPSYIHPLELNTEHVIDG-VKVTLLEANHCPGAALIHFRL----------- 224
RLV V+ +++ PL L V++G V+VTL++ANHCPGA + FR+
Sbjct: 93 RLVAHLTGVSTAWLRPLPLGRPVVVEGLVEVTLVDANHCPGAVQLLFRVLPRGGGGGAAG 152
Query: 225 ------------------------QDGQC--------YLHTGDFRASRLMQSYPLLVNHR 252
D C YLH GD R S MQS+P L R
Sbjct: 153 GGAGGVGGVDATDAAKSAGGSTRGADAGCSSGAGAVRYLHCGDMRYSPAMQSWPQLGAWR 212
Query: 253 -VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAI 311
++LDTTYC PK+ FP++++ ++YV I
Sbjct: 213 GCEGVFLDTTYCQPKHTFPTQDEAVDYVAS----------------------------QI 244
Query: 312 SKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL-------PMSSLKFETLK 364
+ G++I+ ++++ VL+ PE + + G HV P+ + + TL
Sbjct: 245 HERTGLRIHVSSTKLDVLRLLLPPEPNPD-PDAGVAAAAHVFTDDPAASPVHVVGWGTLG 303
Query: 365 D---YLKP--YGNQYAA-------VLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVP 412
+ Y +P Q AA V+ F PTGWTY + + S+G ++++ VP
Sbjct: 304 ETWPYFRPNFVNMQRAAEIMGARCVVGFVPTGWTYEM----KRSVFSVHSKGALSVHLVP 359
Query: 413 YSEHSSFTELREFVQ 427
YSEHSS+ EL E+V+
Sbjct: 360 YSEHSSYPELLEYVK 374
>gi|449490487|ref|XP_004176715.1| PREDICTED: LOW QUALITY PROTEIN: 5' exonuclease Apollo [Taeniopygia
guttata]
Length = 423
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 150/302 (49%), Gaps = 27/302 (8%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
+ GTP VD + G +FL+H H DH GL W H P+YCSP+TARL+ L V
Sbjct: 6 LAGTPIAVDFWSLRRAAGARLFFLSHMHSDHTVGLSSTW-HRPLYCSPITARLLHHRLQV 64
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSY 245
+I PLE+ HV+ V VTL+++NHCPG+ + F G L+TGDFR + MQ
Sbjct: 65 PMCWIRPLEVGQSHVVGEVTVTLIDSNHCPGSVMFLFEGTFG-TILYTGDFRYTSAMQDE 123
Query: 246 PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKE 305
P L ++ LYLD T+C P+ PS+ R + ++ P+ VV+G YS+GKE
Sbjct: 124 PALRGRHIDRLYLDNTHCQPQRALPSRA----LATRQAAHLIRAHPQHHVVIGVYSLGKE 179
Query: 306 SVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKD 365
++ + ++ + + R ++ P++ G + V E D
Sbjct: 180 TLLVDLALEFSTWVVVSPWRLEQMRLLGLPDVFTAEEGTGXIRAVDVA-------EICWD 232
Query: 366 YLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREF 425
L + Q+ +A PTG RP+ + I+ +PYS+HSSF ELREF
Sbjct: 233 ALVXWNAQHPQPMAIIPTG--------------RPVRFTHPNIHLIPYSDHSSFEELREF 278
Query: 426 VQ 427
V+
Sbjct: 279 VK 280
>gi|67473862|ref|XP_652680.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56469553|gb|EAL47293.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449704840|gb|EMD45008.1| DNA repair metallobeta-lactamase, putative [Entamoeba histolytica
KU27]
Length = 396
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 155/311 (49%), Gaps = 44/311 (14%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190
F VDAF+Y IKG + L+HFH DHY GL RW G I + +T LVR V Y+
Sbjct: 30 FIVDAFKY-QIKGYKYFLLSHFHSDHYLGLSSRWKCGIIIGTEITLNLVRYKFKVENEYL 88
Query: 191 HPLELNTEHVI-----DGVKVTLLEANHCPGA-ALIHFRLQDGQCYLHTGDFRASRLMQS 244
+ + LNT DG VT +EA H PG+ + R+ DG YLH GDFR +Q+
Sbjct: 89 YVIPLNTPTYFEGSNNDGYIVTAIEAGHAPGSCCFVIKRISDGIIYLHVGDFRFDSTLQN 148
Query: 245 ----YPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
+ +N L+LDTTYC+P+YKF ++ + N V++ K + KTL +V Y
Sbjct: 149 DKNWKEYVFTQHINTLFLDTTYCDPQYKFKERQIICNEAVKIVKQSM---GKTLFIVQTY 205
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF 360
+IGKE I++ G+KI+ + ++ +++ LC + D L+ L SSL+
Sbjct: 206 TIGKEMFVEEIARQTGIKIHVDENKYSIVK----------LCKR--DLSLYTLEESSLEI 253
Query: 361 ETLKDY---------LKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV 411
T L N+Y ++ F+PTGW T + + Y +
Sbjct: 254 RTSTSNSSITSLTVELSQLPNKYDRIIIFQPTGWAKKTTCKGSFE---------VKEYKM 304
Query: 412 PYSEHSSFTEL 422
PYSEHSSF EL
Sbjct: 305 PYSEHSSFNEL 315
>gi|407043694|gb|EKE42094.1| DNA repair metallo-beta-lactamase [Entamoeba nuttalli P19]
Length = 396
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 156/311 (50%), Gaps = 44/311 (14%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190
F VDAF+Y IKG + L+HFH DHY GL +W G I + +T LV+ + Y+
Sbjct: 30 FIVDAFKY-QIKGYKYFLLSHFHSDHYQGLSSKWKCGIIIGTEITLNLVKYKFKIKNEYL 88
Query: 191 HPLELNTEHVI-----DGVKVTLLEANHCPGA-ALIHFRLQDGQCYLHTGDFRASRLMQS 244
+ + LNT DG VT +EA H PG+ + R+ DG YLH GDFR +Q+
Sbjct: 89 YVIPLNTPTYFEGSNNDGYIVTAIEAGHAPGSCCFVIKRISDGIIYLHVGDFRFDSTLQN 148
Query: 245 ----YPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
+ +N L+LDTTYC+P+YKF ++ + N V++ K + KTL +V Y
Sbjct: 149 DKNWKEYVFTQHINTLFLDTTYCDPQYKFKERQIICNEAVKIVKQSM---GKTLFIVQTY 205
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF 360
+IGKE I++ G+KI+ + ++ +++ LC + D L+ L SSL+
Sbjct: 206 TIGKEMFVEEIARQTGIKIHVDENKYSIVK----------LCKR--DLSLYTLEESSLEI 253
Query: 361 E---------TLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV 411
+L L N+Y ++ F+PTGW T ++ Y +
Sbjct: 254 RTSISNSSITSLTVELSQLPNKYDRIIIFQPTGWAKKTTCKGSFEVKE---------YKI 304
Query: 412 PYSEHSSFTEL 422
PYSEHSSF EL
Sbjct: 305 PYSEHSSFNEL 315
>gi|350296124|gb|EGZ77101.1| hypothetical protein NEUTE2DRAFT_99556 [Neurospora tetrasperma FGSC
2509]
Length = 956
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 105/181 (58%), Gaps = 21/181 (11%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK +P VDAFRYG+++GC AYFL+HFH DHY GL W HGPIYCS +T
Sbjct: 499 RTCPFYKIMPNFSICVDAFRYGAVQGCKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGS 558
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI----DGVKVTLLEANHCPGAALIHFRLQDG-----Q 228
LV+M L Y+ LE + V VT++EANHCPG++L F + G Q
Sbjct: 559 LVKMQLRTAAKYVVELEFGETVPVPETGGAVMVTMIEANHCPGSSLFLFEKKVGKEGRIQ 618
Query: 229 CYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
LH GDFRA +PLL +++V YLDTTY NP+Y FP +EDV+
Sbjct: 619 RILHCGDFRACPAHVEHPLLKPETLDKVTGKTKQQKIDVCYLDTTYLNPRYSFPPQEDVI 678
Query: 277 N 277
Sbjct: 679 Q 679
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 277 NYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
N LT + ++ + LVV G YSIGKE + +AI++AL KI+A+ S+ R+ + D PE
Sbjct: 755 NAFTALTSSSTIRKNRLLVVCGTYSIGKERICVAIAQALRSKIFASPSKIRITKQLDDPE 814
Query: 337 LSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPY-GNQYAAVLAFRPTGWTY 387
LS + + +H+ + ++ +TL +YL+ + N ++ ++ FRP+GW+Y
Sbjct: 815 LSSLMTADPREAQVHMQALGEIRADTLAEYLELHRSNGFSRIVGFRPSGWSY 866
>gi|164424300|ref|XP_958874.2| hypothetical protein NCU07381 [Neurospora crassa OR74A]
gi|157070457|gb|EAA29638.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 955
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 106/186 (56%), Gaps = 21/186 (11%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK +P VDAFRYG+++GC AYFL+HFH DHY GL W HGPIYCS +T
Sbjct: 499 RTCPFYKIMPNFSICVDAFRYGAVQGCKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGS 558
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI----DGVKVTLLEANHCPGAALIHFRLQDG-----Q 228
LV+M L Y+ LE + V VT++EANHCPG++L F + G Q
Sbjct: 559 LVKMQLRTAAKYVVELEFGETVPVPETGGAVMVTMIEANHCPGSSLFLFEKKVGKEGRIQ 618
Query: 229 CYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
LH GDFRA +PLL +++V YLDTTY NP+Y FP +EDV+
Sbjct: 619 RILHCGDFRACPAHVEHPLLKPETLDKVTGKTKQQKIDVCYLDTTYLNPRYSFPPQEDVI 678
Query: 277 NYVVRL 282
+
Sbjct: 679 QACAEV 684
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 71/118 (60%), Gaps = 1/118 (0%)
Query: 277 NYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
N LT + ++ + LVV G YSIGKE + +AI++AL KI+A+ S+ R+ + D PE
Sbjct: 755 NAFTALTSSSTIRKNRLLVVCGTYSIGKERICVAIAQALRSKIFASPSKIRITKQLDDPE 814
Query: 337 LSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPY-GNQYAAVLAFRPTGWTYSETVGN 393
LS + + +H+ + ++ +TL +YL+ + N ++ ++ FRP+GW+Y G+
Sbjct: 815 LSSLMTADPREAQVHMQALGEIRADTLAEYLELHRSNGFSRIVGFRPSGWSYRPGSGS 872
>gi|327271542|ref|XP_003220546.1| PREDICTED: 5' exonuclease Apollo-like [Anolis carolinensis]
Length = 563
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 152/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IPGTP VD + +FL+H H DH GL W+ PIYCSPLT +++R+ L V
Sbjct: 6 IPGTPIAVDFWNIRKAAQARLFFLSHMHTDHTVGLSSTWNR-PIYCSPLTGQILRLKLKV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +IHPLE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SEQWIHPLEVGESHVLALDEIGKETMTVTLIDANHCPGSVMFLFEGYFG-IILYTGDFRY 123
Query: 239 SRLMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
S MQ L N + +N LYLD T C P + PS+E + K ++ P LV +
Sbjct: 124 SPNMQQEEALKNKKLINTLYLDNTNCYPSFVLPSRETATEQI----KEVIRAHPSHLVKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G Y++G+ES+ + ++ I + R ++ L ++ +H + S
Sbjct: 180 GIYTLGRESLLVELAHEFHTWIVVSPRRLEIMHLLG---LDDVFTSEEWAGRIHAVDFSE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
++ T+ + NQ +A PT RP+ + Y VPYS+HS
Sbjct: 237 IRQATMISW-----NQIHPTIAVLPTS--------------RPVKINHPGAYVVPYSDHS 277
Query: 418 SFTELREFV 426
SF EL EFV
Sbjct: 278 SFEELLEFV 286
>gi|440468054|gb|ELQ37237.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae Y34]
gi|440489014|gb|ELQ68695.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae P131]
Length = 886
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 22/192 (11%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
++ +R+CPFYK +PG VDAFRYG+++GC+AYFL+HFH DHY GL W+HGPIYCS
Sbjct: 391 RQAYERTCPFYKIMPGLSICVDAFRYGAVQGCNAYFLSHFHSDHYIGLTANWTHGPIYCS 450
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+T L++ L Y+ LE V+ +GV VT++ ANHCPG++L F G
Sbjct: 451 KVTGSLIKSQLRTAAKYVVELEFEERFVVPGTEGVVVTMIPANHCPGSSLFLFEKTLGKG 510
Query: 228 -----QCYLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA ++P L+ ++++ YLDTTY NP+Y FP
Sbjct: 511 SSARAQRILHCGDFRACPAHIAHPQLMPEVIDSISGKIKKQKIDICYLDTTYLNPRYSFP 570
Query: 271 SKEDVLNYVVRL 282
+E V+ L
Sbjct: 571 PQEVVIRSCAEL 582
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 27/168 (16%)
Query: 286 CLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG 345
L + + LVV G YSIGKE + AI++AL KI+A+A + R++ PEL+ + +
Sbjct: 645 ALNPKSRLLVVCGTYSIGKERICKAIAQALRTKIFASAHKIRIIAQLGDPELTALMTSNP 704
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY--SETVGN---------- 393
+ +H+ +S ++ ETL DYL Y + ++ FRP+GW Y + T N
Sbjct: 705 AEAQVHMQMLSEIRPETLSDYLATYRAHFGRIVGFRPSGWNYRPAGTAANANASPSSVAM 764
Query: 394 --------------QLDLIRPLSRGNITI-YGVPYSEHSSFTELREFV 426
DL+ N + +GVPYSEHSSF EL F+
Sbjct: 765 TTLLHGGNWRPQYASKDLVPQRGSTNEAMCFGVPYSEHSSFRELAMFI 812
>gi|389642187|ref|XP_003718726.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae 70-15]
gi|351641279|gb|EHA49142.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae 70-15]
Length = 886
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 22/192 (11%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
++ +R+CPFYK +PG VDAFRYG+++GC+AYFL+HFH DHY GL W+HGPIYCS
Sbjct: 391 RQAYERTCPFYKIMPGLSICVDAFRYGAVQGCNAYFLSHFHSDHYIGLTANWTHGPIYCS 450
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG-- 227
+T L++ L Y+ LE V+ +GV VT++ ANHCPG++L F G
Sbjct: 451 KVTGSLIKSQLRTAAKYVVELEFEERFVVPGTEGVVVTMIPANHCPGSSLFLFEKTLGKG 510
Query: 228 -----QCYLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFP 270
Q LH GDFRA ++P L+ ++++ YLDTTY NP+Y FP
Sbjct: 511 SSARAQRILHCGDFRACPAHIAHPQLMPEVIDSISGKIKKQKIDICYLDTTYLNPRYSFP 570
Query: 271 SKEDVLNYVVRL 282
+E V+ L
Sbjct: 571 PQEVVIRSCAEL 582
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 27/168 (16%)
Query: 286 CLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG 345
L + + LVV G YSIGKE + AI++AL KI+A+A + R++ PEL+ + +
Sbjct: 645 ALNPKSRLLVVCGTYSIGKERICKAIAQALRTKIFASAHKIRIIAQLGDPELTALMTSNP 704
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY--SETVGN---------- 393
+ +H+ +S ++ ETL DYL Y + ++ FRP+GW Y + T N
Sbjct: 705 AEAQVHMQMLSEIRPETLSDYLATYRAHFGRIVGFRPSGWNYRPAGTAANANASPSSVAM 764
Query: 394 --------------QLDLIRPLSRGNITI-YGVPYSEHSSFTELREFV 426
DL+ N + +GVPYSEHSSF EL F+
Sbjct: 765 TTLLHGGNWRPQYASKDLVPQRGSTNEAMCFGVPYSEHSSFRELAMFI 812
>gi|410899533|ref|XP_003963251.1| PREDICTED: 5' exonuclease Apollo-like [Takifugu rubripes]
Length = 590
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 153/311 (49%), Gaps = 35/311 (11%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K IP TP VD + +FL+H H DH GL WSH PIYCSP TA L+R+ L
Sbjct: 6 KVIPRTPLAVDFWYVRKCPETRLFFLSHMHSDHTQGLTSTWSHRPIYCSPTTATLLRLRL 65
Query: 184 LVNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
V +IHPLEL+ +++ + + VTL++ANHCPG+ + F+ G L+TGDF
Sbjct: 66 KVKEQWIHPLELDEPYMLPLDDIGKETMTVTLIDANHCPGSVMFLFQGYFGSI-LYTGDF 124
Query: 237 RASRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
R + M P L N ++VLYLD T C+P P+++ + K ++ P V
Sbjct: 125 RYTPSMLREPCLRTNITIDVLYLDNTNCDPNRTIPTRQRATQQI----KEIIRGHPTHCV 180
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V+G Y++GKE++ + ++ I + R L++ P + T+ + V+
Sbjct: 181 VIGLYALGKETLLVDLAMEFKTWIEVSEGRMETLKALGLPNV---FTTEPGAGRIRVVEQ 237
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
S ++ + N LA PT RPL + IY VPYS+
Sbjct: 238 SEIRAARFHQW-----NTEEPTLAILPTS--------------RPLVSFHPNIYVVPYSD 278
Query: 416 HSSFTELREFV 426
HSS+ EL +FV
Sbjct: 279 HSSYQELEDFV 289
>gi|402218716|gb|EJT98792.1| DRMBL-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 648
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 107/191 (56%), Gaps = 21/191 (10%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG I G +AY LTH H DHY L W HGPIYCS TA
Sbjct: 163 RKAPFYKVMQGMPIAVDAFRYGKIPGVTAYCLTHAHSDHYTNLSSSWKHGPIYCSSTTAN 222
Query: 178 LVRMCLLVNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHF----RLQDGQC- 229
L+++ L V P Y+HPL LNT + GV+V LLEANHCPG+ L F + G
Sbjct: 223 LIKLNLSVAPEYVHPLPLNTPTTLPNTGGVQVILLEANHCPGSVLFLFIGRQTVNAGDSP 282
Query: 230 -------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
YLH GDFRA +P + +++++YLDTTY NP+Y FP + V+
Sbjct: 283 ISSPFVGSQRTFRYLHCGDFRACPAHALHPEIKGKKLDLVYLDTTYLNPRYCFPPQRQVV 342
Query: 277 NYVVRLTKNCL 287
+ L K +
Sbjct: 343 DACASLAKRMV 353
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 86/157 (54%), Gaps = 24/157 (15%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
KTLV +G YSIGKE + AI+ ALG KIY +A +R +L + D PEL L T +H
Sbjct: 441 KTLVAIGTYSIGKERIVKAIALALGSKIYCDARKRGLLLAQDDPELHSLLTTDPYSCQVH 500
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNI----- 406
+LP+ S+ + ++DYL+ + + VL FRPTGWTY G +D++ +SR +
Sbjct: 501 LLPLQSITVDRMQDYLEQFKGLFDRVLGFRPTGWTYVPPAG--MDVMPDVSRVIVRDQKR 558
Query: 407 -----------------TIYGVPYSEHSSFTELREFV 426
+YGVPYSEHSSF EL F
Sbjct: 559 VFDETALKPTRAASQKYMLYGVPYSEHSSFFELTCFA 595
>gi|336274062|ref|XP_003351785.1| hypothetical protein SMAC_00330 [Sordaria macrospora k-hell]
gi|380096065|emb|CCC06112.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1048
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 104/181 (57%), Gaps = 21/181 (11%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK +P VDAFRYG+++GC AYFL+HFH DHY GL W HGPIYCS +T
Sbjct: 510 RTCPFYKIMPNFSICVDAFRYGAVQGCKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGS 569
Query: 178 LVRMCLLVNPSYIHPLELN----TEHVIDGVKVTLLEANHCPGAALIHFRLQDG-----Q 228
LV+ L Y+ LE V VT++EANHCPG++L F Q G Q
Sbjct: 570 LVKTQLRTAAKYVVELEFGETVPVPQTGGAVMVTMIEANHCPGSSLFLFEKQVGKEGRTQ 629
Query: 229 CYLHTGDFRASRLMQSYPLLV------------NHRVNVLYLDTTYCNPKYKFPSKEDVL 276
LH GDFRA +PLL +++V YLDTTY NP+Y FP +EDV+
Sbjct: 630 RILHCGDFRACPAHVEHPLLKPETLDKVTGKTRQQKIDVCYLDTTYLNPRYSFPPQEDVI 689
Query: 277 N 277
+
Sbjct: 690 H 690
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
+ LVV G YSIGKE + +AI++ALG KI+A+ S+ R+ + EL G + + + +H
Sbjct: 788 RLLVVCGTYSIGKERICVAIAQALGSKIFASPSKIRITKQLGDAELFGLMTSDPREAQVH 847
Query: 352 VLPMSSLKFETLKDYLKPY-GNQYAAVLAFRPTGWTY 387
+ + ++ +TL +YL+ + N ++ ++ FRP+GW+Y
Sbjct: 848 MQALGEIRADTLAEYLELHRSNGFSRIVGFRPSGWSY 884
>gi|367003601|ref|XP_003686534.1| hypothetical protein TPHA_0G02630 [Tetrapisispora phaffii CBS 4417]
gi|357524835|emb|CCE64100.1| hypothetical protein TPHA_0G02630 [Tetrapisispora phaffii CBS 4417]
Length = 680
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 70/365 (19%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190
VD F Y S + YFL+HFH DHY GL K W G IYC+ +TA+L+ + + +
Sbjct: 274 IVVDGFNYASEPDINKYFLSHFHSDHYIGLKKSWDQGIIYCTEVTAKLMELKFNLTGDMV 333
Query: 191 HPLELNTEHVIDG-VKVTLLEANHCPGAALIHFRLQDG---------QCYLHTGDFRASR 240
L LN I+ + V ++ANHCPGAA+ F+ D + LHTGDFR+++
Sbjct: 334 QILPLNEHFWIEPYLSVIAIDANHCPGAAIFLFQEWDKAKLDTLPSLRQILHTGDFRSNK 393
Query: 241 -LMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVL----NYVVRLT---KNCLKKQP 291
++++ +VN ++ +YLDTTY P Y FP ++ VL N+ +L K L K
Sbjct: 394 SMIENINRIVNGISIDEIYLDTTYLTPGYHFPLQKSVLDTTSNFACKLENDGKQLLFKDT 453
Query: 292 K----------------TLVVVGAYSIGKESVFLAISKALGVKIYANAS--RRRVLQSFD 333
+ L ++G YSIGKE + ++I+K L KI+ N + +++ +
Sbjct: 454 QRSIMSFLKNKNKCKFNNLFLIGTYSIGKEKLAISIAKKLNTKIFINKDSLKFKIISQYL 513
Query: 334 WPELSGNLCTQGNDTLLHVLPMSSLKF-ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG 392
+ + +++ +H++P+S L ET+++Y+ Y ++ F PTGWT+ G
Sbjct: 514 NCFPADIITNDVSESYVHLVPISVLNSKETIENYITTLSESYENIVGFIPTGWTFMNRYG 573
Query: 393 NQLDLIRPLSRG-------------------NI-------------TIYGVPYSEHSSFT 420
+LD ++ NI I+ VPYSEHSSF
Sbjct: 574 IKLDQYETIAEKVKHCQELLDEKNALKYDTFNIDSILKQYKKYAKYQIFKVPYSEHSSFK 633
Query: 421 ELREF 425
+L EF
Sbjct: 634 DLIEF 638
>gi|336464041|gb|EGO52281.1| hypothetical protein NEUTE1DRAFT_125795 [Neurospora tetrasperma
FGSC 2508]
Length = 954
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 105/186 (56%), Gaps = 21/186 (11%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK +P VDAFRYG+++GC AYFL+HFH DHY GL W HGPIYCS +T
Sbjct: 498 RTCPFYKIMPNFSICVDAFRYGAVQGCKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGS 557
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI----DGVKVTLLEANHCPGAALIHFRLQDG-----Q 228
LV+ L Y+ LE + V VT++EANHCPG++L F + G Q
Sbjct: 558 LVKTQLRTAAKYVVELEFGETVPVPETGGAVMVTMIEANHCPGSSLFLFEKKVGKEGRTQ 617
Query: 229 CYLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
LH GDFRA +PLL +++V YLDTTY NP+Y FP +EDV+
Sbjct: 618 RILHCGDFRACPAHVEHPLLKPETLDKVTGKIKQQKIDVCYLDTTYLNPRYSFPPQEDVI 677
Query: 277 NYVVRL 282
+
Sbjct: 678 QACAEV 683
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Query: 277 NYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
N LT + ++ + LVV G YSIGKE + +AI++ALG KI+A+ S+ R+ + D PE
Sbjct: 754 NAFTALTSSSTIRKNRLLVVCGTYSIGKERICVAIAQALGSKIFASPSKIRITKQLDDPE 813
Query: 337 LSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPY-GNQYAAVLAFRPTGWTY 387
LS + + +H+ + ++ +TL +YL+ + N ++ ++ FRP+GW+Y
Sbjct: 814 LSSLMTADPREAQVHMQALGEIRADTLAEYLELHRSNGFSRIVGFRPSGWSY 865
>gi|397636771|gb|EJK72411.1| hypothetical protein THAOC_06062 [Thalassiosira oceanica]
Length = 702
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 162/330 (49%), Gaps = 37/330 (11%)
Query: 38 DDEEEEEKEESFADDFYRCGTDWSCLLQTERKLKQANLFDMWGLKSNSESEANCLFSPPM 97
D E++ ++EE +++ + K KQ L + + ++ + M
Sbjct: 335 DSEDDSDREEDMCGEWHGNAKGDTTSAGNNTKTKQTGLMNFFTKPVKCLTDVLMTGAKQM 394
Query: 98 KKLKASNGKSTATHLKKIVDR-------------SCPFYKKIPGTPFTVDAFRYGSIKGC 144
K KA+ K+ + KK R CP +K+I GT F D F Y S
Sbjct: 395 SKKKATLEKNKLENSKKSGKRRRGQWRSNNSQRGECPAFKRITGTDFICDGFYYSSPNLS 454
Query: 145 SAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDG- 203
S YFLTHFH DHYGG+ K W+HG IYCS TA LV L V ++HPL +NT V+
Sbjct: 455 SNYFLTHFHSDHYGGITKNWNHGTIYCSLPTANLVHRQLGVEKRFLHPLPMNTPFVVVSE 514
Query: 204 -------VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR-ASRLMQSYPLLV-----N 250
V VTLL+ANHCPGA + F + + + LH GDFR + L P L +
Sbjct: 515 KGGKHVPVTVTLLDANHCPGAIMFLFEVGNRR-ILHVGDFRWNNELHMRMPQLRSLGCGS 573
Query: 251 HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTK---NCLKKQP--KTLVVVGAYSIGKE 305
R++ LYLDTTYC KY P++ + ++ + + N KK KTL + GAY+IGKE
Sbjct: 574 PRLDELYLDTTYCAEKYTLPTQAEAIDAAIEVATKEVNYSKKNASNKTLFLFGAYTIGKE 633
Query: 306 SVFLAIS----KALGVKIYANASRRRVLQS 331
++L + + GV+ S RV QS
Sbjct: 634 RIYLLVCGRAFQNEGVRNMPVGSPARVSQS 663
>gi|348521498|ref|XP_003448263.1| PREDICTED: 5' exonuclease Apollo-like [Oreochromis niloticus]
Length = 586
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 35/311 (11%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K IP TP VD + G +FL+H H DH GL WS+ PIYCSP+TA L+++ L
Sbjct: 6 KVIPHTPLAVDFWHVRKCPGTRLFFLSHMHSDHTTGLTSTWSNRPIYCSPITATLLKLKL 65
Query: 184 LVNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
V +IHPLE+ +++ + + VTL++ANHCPGA + F G L+TGDF
Sbjct: 66 QVKEQWIHPLEVGEPYLLPLDDIGKERLTVTLIDANHCPGAVMFLFEGYFGS-ILYTGDF 124
Query: 237 RASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
R + M P L + ++VLYLD T C+P PS++ + K ++ P V
Sbjct: 125 RYTPSMLREPCLRTYATIDVLYLDNTNCDPNRTLPSRQRATQQI----KEIIRSHPSHNV 180
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
++G YS+GKES+ L ++ + + R L++ + P++ T+ + +
Sbjct: 181 IIGLYSLGKESLLLELAMEFKSWVEVSFERMETLKALELPDV---FTTEPGAGRIRAVDQ 237
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
S + L + N+ LA PT RPL + ++ VPYS+
Sbjct: 238 SEICASALHQW-----NKEQPTLAILPTS--------------RPLISFHPDVHVVPYSD 278
Query: 416 HSSFTELREFV 426
HSS+ EL +FV
Sbjct: 279 HSSYQELEDFV 289
>gi|367042878|ref|XP_003651819.1| hypothetical protein THITE_2112528 [Thielavia terrestris NRRL 8126]
gi|346999081|gb|AEO65483.1| hypothetical protein THITE_2112528 [Thielavia terrestris NRRL 8126]
Length = 984
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 109/185 (58%), Gaps = 22/185 (11%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL W+HGPIYCS +T
Sbjct: 464 RTCPFYKIMPGFSICVDAFRYGAVEGCQAYFLSHFHSDHYIGLTASWTHGPIYCSKVTGS 523
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI-----DGVKVTLLEANHCPGAALIHFRLQDG---QC 229
LV+ L Y+ +EL E + +GV VT++ ANHCPG++L F G Q
Sbjct: 524 LVKSQLKTAAKYV--VELEFEKTVPVPQTNGVTVTMIPANHCPGSSLFLFEKTTGGRTQR 581
Query: 230 YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLN 277
LH GDFRA +P L +++V YLDTTY NP+Y FP +++V++
Sbjct: 582 ILHCGDFRACPAHVEHPKLRPETVDAISGRTKQQKIDVCYLDTTYLNPRYSFPPQDEVVD 641
Query: 278 YVVRL 282
L
Sbjct: 642 ACAEL 646
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
+ LVV G YSIGKE + +AI+KAL KIYA ++ R+ D ELS L ++ +H
Sbjct: 722 RLLVVCGTYSIGKERICVAIAKALRSKIYATPAKIRMCAQLDDAELSALLTPNPSEAQVH 781
Query: 352 VLPMSSLKFETLKDYLKPYG--NQYAAVLAFRPTGWTY 387
+ + ++ ETL +YL P+ ++A ++ RP+GW Y
Sbjct: 782 MQMLMEIRAETLAEYLAPFKARGEFARIVGIRPSGWNY 819
>gi|299117631|emb|CBN75473.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 711
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 138/269 (51%), Gaps = 44/269 (16%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K + G+PF VD FR+ + + C Y LTHFH DH GL K +S G IYCS TA L+ +
Sbjct: 9 KWVEGSPFMVDGFRFTNPR-CRHYLLTHFHSDHTTGLYKSFSAGKIYCSHGTANLIVELM 67
Query: 184 LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR--LQDGQCYLHTGDFRASRL 241
VN + L ++T ++ G +TL++ANHCP A + R G+ LHTGDFRA+
Sbjct: 68 GVNRERVVALPMDTPVLVAGFDLTLIDANHCPAAVMFVIRDPRPGGRTTLHTGDFRAAES 127
Query: 242 MQSYPLL--VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
+ P++ + R++ LYLDTTYC P++ FP + +VL +L + L++ P TL +VG
Sbjct: 128 VCRNPVVKSLKGRLDSLYLDTTYCGPRHTFPDQSEVLAQATQLVRMELQRDPNTLFLVGT 187
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
YSIGKE V A++K T TL L +
Sbjct: 188 YSIGKEKVLEAVAKD----------------------------TNSPATLREALTKA--- 216
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYS 388
+ G + +V+ RPTGWT++
Sbjct: 217 --------RAGGAPFTSVVGVRPTGWTHT 237
>gi|171684601|ref|XP_001907242.1| hypothetical protein [Podospora anserina S mat+]
gi|170942261|emb|CAP67913.1| unnamed protein product [Podospora anserina S mat+]
Length = 916
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 111/185 (60%), Gaps = 19/185 (10%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL W+HGPIYCS +T
Sbjct: 428 RTCPFYKIMPGFSICVDAFRYGAVEGCKAYFLSHFHSDHYIGLTANWTHGPIYCSKVTGS 487
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFR--LQDGQCY-- 230
LV+ L Y+ LE + + GV VT++ ANHCPG++L F + G+ +
Sbjct: 488 LVKTQLKTAAKYVVELEFDKTVPVPHTKGVTVTMIPANHCPGSSLFLFEKAMGGGKTHRI 547
Query: 231 LHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNY 278
LH GDFRA + +P L + +++V YLDTTY NPKY FP ++DV+
Sbjct: 548 LHCGDFRACQAHLEHPHLRPETIDAVTGKTKHQKIDVCYLDTTYLNPKYSFPPQKDVIAT 607
Query: 279 VVRLT 283
++
Sbjct: 608 CAEMS 612
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 36/185 (19%)
Query: 276 LNYVVRLTKNCLKKQP-KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW 334
LN L+ N Q + L++ G YSIGKE + + I+ AL KIYA+ + +++ D
Sbjct: 668 LNAFTALSGNPQPSQRNRLLILCGTYSIGKERICVGIALALESKIYASPYKLKIVNQLDD 727
Query: 335 PELSGNLCTQGNDTLLHVLPMSSLKFETLKDYL---KPYGNQYAAVLAFRPTGWTYSETV 391
PEL L + +H+ +S L E L YL + +G ++ ++ F+P+GW Y
Sbjct: 728 PELISLLTPNPQEAQVHLASLSDLNKENLISYLEENRRFG--FSRIVGFKPSGWNYRPPS 785
Query: 392 GNQLDLIRPLSRGNI------------------------------TIYGVPYSEHSSFTE 421
L++ ++ G++ + GVPYSEHSSF E
Sbjct: 786 LKSLNIKADMAPGSVPMEQLLYGKAWRSRFRKADLIPMRGSTKEGVLLGVPYSEHSSFRE 845
Query: 422 LREFV 426
L FV
Sbjct: 846 LAIFV 850
>gi|195343677|ref|XP_002038422.1| GM10813 [Drosophila sechellia]
gi|194133443|gb|EDW54959.1| GM10813 [Drosophila sechellia]
Length = 1332
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 123/217 (56%), Gaps = 12/217 (5%)
Query: 214 CPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSK 272
CPGA + F+L G+C LHTGDFRAS M+S P+ NH +++LYLDTTY N Y F +
Sbjct: 926 CPGALMFFFKLSSGECILHTGDFRASADMESLPIFWNHSNIDLLYLDTTYMNKNYDFCHQ 985
Query: 273 EDVLNYVVRLTKNCLKKQP--KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
+ ++ V L + L+K + L+V G+Y IGKE ++LA++K +K++ ++R ++
Sbjct: 986 SESVDRAVELVRAFLEKNAAKRILIVCGSYVIGKEKIWLALAKEFTMKVWTESNRSNAVR 1045
Query: 331 SFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSET 390
+WP+L L LHV+ M + + L DY + +QY +L RP+GW +
Sbjct: 1046 CLNWPDLDSVLTEDRRGANLHVIAMGKISYPNLVDYFTEFEDQYDMLLGIRPSGWEKNS- 1104
Query: 391 VGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+P I+ G+ YSEHSS+ EL FV+
Sbjct: 1105 --------KPSYGKRISTIGIEYSEHSSYKELERFVR 1133
>gi|47228753|emb|CAG07485.1| unnamed protein product [Tetraodon nigroviridis]
Length = 386
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 156/334 (46%), Gaps = 57/334 (17%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K IP TP VD + G +FL+H H DH GL WSH PIYCS +TA L+R+ L
Sbjct: 6 KVIPRTPLAVDFWHVRKCPGTRLFFLSHMHSDHTVGLTSTWSHRPIYCSAITAALLRLKL 65
Query: 184 LVNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFR----------LQD 226
V +IHPLEL+ V+ + + VTL++ANHCPG+ + F+ D
Sbjct: 66 QVKERWIHPLELDEPCVLPLDDIGKETMTVTLMDANHCPGSVMFLFQGYFGSILYTGQWD 125
Query: 227 GQCYLH-------------TGDFRASRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSK 272
+ LH GDFR + M P L N ++VLYLD T C+P PS+
Sbjct: 126 ARTGLHLQLIFRNISNLFFAGDFRYTPSMLREPCLRTNITIDVLYLDDTNCDPNRSIPSR 185
Query: 273 EDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
+ + K +++ P VV+G Y++GKES+ L ++ I + R L++
Sbjct: 186 QSATQQI----KEIIRRHPTHCVVIGLYALGKESLLLELAMEFKTWIEVSVDRMETLKAL 241
Query: 333 DWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG 392
+ P++ T + V+ S ++ + N+ LA PT
Sbjct: 242 ELPDV---FTTDPGAGRIRVVEQSEIRAAAFHQW-----NKEEPTLAILPTS-------- 285
Query: 393 NQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
RPL + IY VPYS+HSS+ EL +FV
Sbjct: 286 ------RPLVSFHPNIYVVPYSDHSSYQELEDFV 313
>gi|403167204|ref|XP_003327017.2| hypothetical protein PGTG_08794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166911|gb|EFP82598.2| hypothetical protein PGTG_08794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 797
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 106/165 (64%), Gaps = 5/165 (3%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
++ PFYK +PGT +VD F +G + G SAYFL+H H DHY L W HG IYCS TA
Sbjct: 251 KAVPFYKLMPGTTISVDCFSHGPVPGVSAYFLSHAHSDHYTKLSSSWKHGKIYCSKTTAN 310
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR---LQDGQC--YLH 232
LV++ L V+ +I PL+ NT + +D V+V L++ANHCPG+A+ F D + YLH
Sbjct: 311 LVKLKLRVDSHWIVPLDFNTPYTVDDVRVVLIDANHCPGSAMFLFEGITKPDRKPFRYLH 370
Query: 233 TGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLN 277
GDFRA+ +P + +++ YLDTTY +PKY FP+++ V+
Sbjct: 371 CGDFRATPAQLRHPAIHEKVIDICYLDTTYLDPKYSFPAQDQVIQ 415
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 57/191 (29%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIY-ANASRRRVLQSFDW----PELSGNLCTQGN 346
K+L+++G YSIGKE + + ++K LG K++ A+A + ++ + D EL G L
Sbjct: 511 KSLILIGTYSIGKERIVIEVAKKLGSKVFCADARKTGIIGAIDRADEEAELQGLLSADPL 570
Query: 347 DTLLHVLPMSSL-KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL-------- 397
+H++ + +L K L+ YL + ++ ++ +PTGW Y + + + L
Sbjct: 571 RAQIHLVNLFALNKPGFLEAYLHKFRPRFNHIIGIKPTGWCYKPSTPSSIALNSIDFSAF 630
Query: 398 -------------------------------------------IRPLSRGNITIYGVPYS 414
++P G + +YGVPYS
Sbjct: 631 IETFQKQQQQPLQDDDEVVVEGERRGNNSRRNNPVGQLIFPEKVKPELAGLVEVYGVPYS 690
Query: 415 EHSSFTELREF 425
EHSSF EL F
Sbjct: 691 EHSSFFELSCF 701
>gi|432866191|ref|XP_004070730.1| PREDICTED: 5' exonuclease Apollo-like [Oryzias latipes]
Length = 582
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 159/311 (51%), Gaps = 35/311 (11%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K IP TP VD + +FL+H H DH GL WS PIYCSP+TA+L+ + L
Sbjct: 6 KIIPHTPLAVDFWHVRKCPSARLFFLSHMHADHTVGLTSTWSGRPIYCSPVTAKLLHLKL 65
Query: 184 LVNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
V +IHPLE+ ++++ + + VTL++ANHCPGA + F+ G L+TGDF
Sbjct: 66 KVKEQWIHPLEIGEQNLLPLDDIGKETLTVTLIDANHCPGAVMFLFQGYFGSI-LYTGDF 124
Query: 237 RASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
R S M P L N+ ++VLYLD T C+P PS++ + K ++ P V
Sbjct: 125 RYSPSMLREPCLKNNITIDVLYLDDTNCDPNRTLPSRQKATQQI----KEIIRSHPDHNV 180
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
V+G Y++GKES+ L ++K + + R L+ + P++ T+ V+
Sbjct: 181 VIGLYTLGKESLLLELAKEFQTWVEVSYDRMETLKVLELPDV---FTTEQGTGRFRVVDH 237
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
S + +L+D+ N LA PT RPL + +++ VPYS+
Sbjct: 238 SEITSASLQDW-----NNEQPTLAILPTS--------------RPLISYHPSVHVVPYSD 278
Query: 416 HSSFTELREFV 426
HSS+ E+ +FV
Sbjct: 279 HSSYQEVVDFV 289
>gi|301605077|ref|XP_002932166.1| PREDICTED: DNA cross-link repair 1B protein isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301605079|ref|XP_002932167.1| PREDICTED: DNA cross-link repair 1B protein isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 517
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
+P TP VD ++ +FL+H H DH GL W+ P+YCSP+TA++++ L V
Sbjct: 6 LPNTPIAVDFWQTRRCSHIRLFFLSHMHSDHTMGLSSTWNR-PLYCSPVTAKVLKYKLQV 64
Query: 186 NPSYIHPLELNTEHV-------IDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ ++I+PLE+ H+ ++ + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SNTWINPLEIGEPHMLPLDNKGLETLTVTLIDANHCPGSVMFLFEGYFGTI-LYTGDFRY 123
Query: 239 SRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
S M YP L N +++VLYLD T C+P+ K PS+ + N + K ++K P +++
Sbjct: 124 SPYMFCYPPLSNKTKIDVLYLDNTNCDPEQKLPSRLEATNMI----KEIIEKHPDHDIMI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G Y+IGKES+ + ++K + + R +L E+ + +H++ S
Sbjct: 180 GVYNIGKESLLVDLAKTFKTWVVVSPQRLELLHIL---EMENVFTIEEGAGRIHLVDQSE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + + N+ LA PT R + + ++ VPYS+HS
Sbjct: 237 VNYINMVRW-----NRVCPTLAILPTS--------------RKVKLWHKDVHVVPYSDHS 277
Query: 418 SFTELREFV 426
SF EL+EFV
Sbjct: 278 SFEELQEFV 286
>gi|353240561|emb|CCA72425.1| hypothetical protein PIIN_06361 [Piriformospora indica DSM 11827]
Length = 589
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 111/190 (58%), Gaps = 24/190 (12%)
Query: 99 KLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYG 158
K K++N ST+ ++ + R PFYK + G P VDAFRYG I G +AY LTH H DHY
Sbjct: 367 KNKSTNQASTSGNVAR---RPAPFYKVMQGMPIAVDAFRYGKIPGVTAYLLTHAHSDHYT 423
Query: 159 GLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCP 215
L W HGPIYCS TA LV L V+P ++HPL ++T+ + GV VTL++ANHCP
Sbjct: 424 NLSASWKHGPIYCSETTANLVIHMLNVDPKWVHPLPMDTKVELPDTGGVTVTLIQANHCP 483
Query: 216 GAALIHFR----LQDGQC--------------YLHTGDFRASRLMQSYPLLVNHRVNVLY 257
G+ L F + G YLH GDFRA S+P++ R++++Y
Sbjct: 484 GSCLFLFEGKQTVNAGDSSFHSAFVGTARVFRYLHCGDFRACPKHVSHPMIQGKRLDLIY 543
Query: 258 LDTTYCNPKY 267
LDTTY +PK+
Sbjct: 544 LDTTYLDPKF 553
>gi|412987940|emb|CCO19336.1| predicted protein [Bathycoccus prasinos]
Length = 697
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 169/359 (47%), Gaps = 74/359 (20%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-----------IYCSPLTARLV 179
VD F++ S AY LTHFH DH GL ++ IYCS +T L+
Sbjct: 17 INVDGFQFQS-PDVKAYVLTHFHSDHTVGLSSAFNGDKGGTTNTKKKKLIYCSKITGSLI 75
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVK--VTLLEANHCPGAALIHFRLQ-DGQCYLHTGDF 236
+ V YI P EL+ E I+G VT +ANHCPGAA+ +F + + LHTGDF
Sbjct: 76 KEITKVKEEYIVPCELHAETEIEGTSYTVTFFDANHCPGAAMAYFFDKVTKRTVLHTGDF 135
Query: 237 RA--------SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
RA +LM++ L N R++ LYLDTTYCNP Y FP ++ L + ++ L+
Sbjct: 136 RADEDKVQKNEKLMET--LKRNGRLDELYLDTTYCNPNYDFPRQKVALECMQKIVLEALR 193
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGV-------------KIYANASRRRVLQSFDWP 335
++PKTL AYS+GKE F AI A+ KI ++++L +W
Sbjct: 194 EEPKTLFTCSAYSVGKEKAFKAIGDAVRTFFEDNDTNNNNNTKIAVMLKKKQMLTLTEWY 253
Query: 336 ELSGNLCTQG--------NDTLLHVLPMSSLKFE---TLKDYLKPYGNQYAAVLAFRPTG 384
+ + C QG HV +S + ++ L +++ V+AF P+G
Sbjct: 254 DDNCFTCFQGEPDDPTGSKAMEQHVRVISHGGKDPHVSMNAILLAEKHRFKRVVAFSPSG 313
Query: 385 W--------TYSET--------VGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
W TY ET +GN G +Y VPYSEHSS+ EL FV+
Sbjct: 314 WAWKWQMRKTYEETKCLICEPWIGND---------GLTKLYHVPYSEHSSYGELLGFVE 363
>gi|367020838|ref|XP_003659704.1| hypothetical protein MYCTH_2052357 [Myceliophthora thermophila ATCC
42464]
gi|347006971|gb|AEO54459.1| hypothetical protein MYCTH_2052357 [Myceliophthora thermophila ATCC
42464]
Length = 903
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYK +PG VDAFRYG+++GC AYFL+HFH DHY GL W+HGPIYCS +T
Sbjct: 400 RTCPFYKIMPGFFICVDAFRYGAVEGCKAYFLSHFHSDHYMGLTANWTHGPIYCSKVTGS 459
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG---QCYL 231
LV+ L Y+ LE ++ GV VT++ ANHCPG++L F Q L
Sbjct: 460 LVKSQLKTAAKYVVELEFEETVLVPDTGGVTVTMIPANHCPGSSLFLFEKSAAGRTQRIL 519
Query: 232 HTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYV 279
H GDFRA +P L +++V YLDTTY NP+Y P ++DV+
Sbjct: 520 HCGDFRACPAHVEHPKLRPETVDAVSGRTKQQKIDVCYLDTTYLNPRYSLPPQDDVITAC 579
Query: 280 VRL 282
L
Sbjct: 580 AEL 582
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 39/175 (22%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
+ LVV G YSIGKE + +AI++AL KIYA+ ++ + + PELS L + + +H
Sbjct: 659 RLLVVCGTYSIGKERICVAIARALRTKIYASPAKVLMCRQLGDPELSSLLTSDPAEAQVH 718
Query: 352 VLPMSSLKFETLKDYLKPYG--NQYAAVLAFRPTGWTY-----------SETVGNQL--- 395
+ + ++ ETL +YL+ Y Q+ ++ FRP+GW Y S T+G L
Sbjct: 719 MQMLMEIRAETLAEYLEGYKVRGQFGRIIGFRPSGWNYRPSAGKPGNGGSATIGANLPPT 778
Query: 396 --------------------DLI--RPLSRGNITIYGVPYSEHSSFTELREFVQV 428
DL+ R SR + +GVPYSEHS F EL FV
Sbjct: 779 SLPTTELLHGPGWKTRFALKDLVPQRGSSR-EVLCFGVPYSEHSGFRELAMFVMA 832
>gi|452821244|gb|EME28277.1| DNA ligase [Galdieria sulphuraria]
Length = 340
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 136/232 (58%), Gaps = 19/232 (8%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
P ++P T F VD F + SA+FLTH+HYDHY GLG + G IYCSP+TARL+
Sbjct: 9 PTSHQVPHTLFLVDYFLKLPTQ-VSAFFLTHWHYDHYRGLGSNFQQGFIYCSPITARLLE 67
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
LV+P +I N ++D V++ L+ANHCPG+ +I F+ +G YLHTGD R ++
Sbjct: 68 RITLVDPQWIVAKHNNEPFLVDKVQIRFLDANHCPGSVMILFQTSEGSNYLHTGDMRFTQ 127
Query: 241 LMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP-------- 291
++ +++N+ ++ +YLDTTYC+ KY+FPS+ + +V +N + + P
Sbjct: 128 DLKKELIVLNNICLDAVYLDTTYCHRKYRFPSQAQTIQRIVHKIQN-MNRIPFQDSNSNR 186
Query: 292 ------KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFD-WPE 336
TL ++ YSIGKE + A+ + G +IY + + +VL+ + W E
Sbjct: 187 IDCTSRHTLYLIATYSIGKERIIDALIQN-GYRIYVSPDKWKVLRCLEFWNE 237
>gi|444523044|gb|ELV13443.1| DNA cross-link repair 1A protein [Tupaia chinensis]
Length = 342
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 108/194 (55%), Gaps = 49/194 (25%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R+CPFYKKIPGT FTVDAF+YG ++GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 147 RTCPFYKKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKNFT-CPVYCSEITGN 205
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L++ L + YIHPL ++TE V++G++V LL+AN
Sbjct: 206 LLKNKLHMQEQYIHPLPMDTECVVNGIRVVLLDANQ------------------------ 241
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
YC+P+Y FPS+++V+ + + P++LVV
Sbjct: 242 ------------------------YCSPEYTFPSQQEVIQSAINTAFEAVTLNPRSLVVC 277
Query: 298 GAYSIGKESVFLAI 311
G YSIGKE VFL I
Sbjct: 278 GTYSIGKEKVFLGI 291
>gi|395535693|ref|XP_003769856.1| PREDICTED: 5' exonuclease Apollo [Sarcophilus harrisii]
Length = 534
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 152/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSPLTARLVR L V
Sbjct: 6 IPHTPIAVDLWNLRRASSARLFFLTHLHADHTEGLSSTWAR-PLYCSPLTARLVRCRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+P +I LE+ HV+ + V VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SPKWIRALEVGESHVLPLDEMGHETVTVTLMDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
S M P L +++ LYLD T C+P PS+++ + L +++ P+ V +
Sbjct: 124 SPSMLQEPALRPGKQIHTLYLDNTNCDPALVLPSRQEATRQITDL----IRRHPQHDVKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G Y++GKES+ + I + R V+Q EL+ + +H + +
Sbjct: 180 GLYNLGKESLLEQLGLEFQTWIVLSPRRMEVVQLM---ELADVFTLEEGAGRIHAVNCAE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + + NQ +A PT R +S + I+ VPYS+HS
Sbjct: 237 ICWSAMLQW-----NQIHPTIAILPTS--------------RRISFSHPGIHVVPYSDHS 277
Query: 418 SFTELREFV 426
SF+EL +FV
Sbjct: 278 SFSELCDFV 286
>gi|405121618|gb|AFR96386.1| DNA cross-link repair protein pso2/snm1 [Cryptococcus neoformans
var. grubii H99]
Length = 809
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 113/218 (51%), Gaps = 31/218 (14%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I G +AY LTH H DHY L K WS+GPIYCS TA
Sbjct: 322 RKAPFYKVLTGMPVAVDAFRYGAIPGVTAYLLTHAHSDHYTNLSKSWSNGPIYCSETTAN 381
Query: 178 LVRMCLLVNPSYIH------PLELNTEHVIDGVKVTLLEANHCPGAALIHFR----LQDG 227
L+ L V+P ++H P E+ GV VT +EANHCPG+++ F + G
Sbjct: 382 LIIHMLEVDPKWVHGLPNDMPFEMPN---TGGVTVTPIEANHCPGSSIFLFEGRQTVNAG 438
Query: 228 QC--------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKE 273
YLH GDFRA+ M +P + +N YLDTTY NPKY FP +
Sbjct: 439 DSGFASPYVGSKRVFRYLHCGDFRANPKMVLHPAIARAPINTCYLDTTYLNPKYCFPPQP 498
Query: 274 DVLNYVVRLTKNCL----KKQPKTLVVVGAYSIGKESV 307
V+N L + + + P V+ +IG V
Sbjct: 499 LVINACATLARRNVVGESEDAPSLKAVLQGSAIGVSGV 536
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 82/155 (52%), Gaps = 20/155 (12%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
+TLVVVG YSIGKE + A++KA+G KIY + ++ +L PEL L + + +H
Sbjct: 604 RTLVVVGTYSIGKERIVKAVAKAIGSKIYCDQRKKGILLCQTDPELHSMLTSDPTEAQVH 663
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL----------DLIRPL 401
+LP+ +++ + L+ YL + VL FRPTGW+YS G + D +
Sbjct: 664 LLPLGNIQLDRLQSYLTLLHPHFDRVLGFRPTGWSYSPPAGTDMLPDVNTVIRRDQAKRF 723
Query: 402 SRG----------NITIYGVPYSEHSSFTELREFV 426
G N +YGVPYSEHSSF EL F
Sbjct: 724 GEGDLKTMRGSNRNFMMYGVPYSEHSSFFELTCFA 758
>gi|219121698|ref|XP_002181198.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407184|gb|EEC47121.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 503
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 167/345 (48%), Gaps = 44/345 (12%)
Query: 125 KIPGTP-FTVDAFRYGSIKGC----SAYFLTHFHYDHYGGL---GKRWSHGPIYCSPLTA 176
+IP P VDAFR ++ + + L+H+H DHYG L GK I+C+P TA
Sbjct: 9 EIPDCPRLFVDAFRGAYLQKTRNPDNVFILSHWHGDHYGSLPRDGKYQGPSLIHCTPTTA 68
Query: 177 RLVRMCLLVNPSYI-----------HPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ 225
L+R V Y+ HPL NT+ + V++T +ANHCPGAA+I +
Sbjct: 69 ALLREIHQVPEKYVVEHGYGETWLFHPLG-NTKG-LSTVQITFYDANHCPGAAIIVVEMA 126
Query: 226 DGQCYLHTGDFRASRLMQSYPLL----VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVR 281
DG+ +LHTGD R +M YP+L + ++ + LDTTY +PK+ F +E ++ +
Sbjct: 127 DGKVHLHTGDMRYHTMMNVYPILERAASSRAIDTVLLDTTYSDPKHNFQPQEAAIDAIAA 186
Query: 282 LTKNCLKKQPK----TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFD---- 333
++ L K L+++ YSIGKE V +S +Y N + R+++
Sbjct: 187 YSEGLLGTSRKCCSNVLILLSCYSIGKEKVLWEVSSRTNQLVYVNDRKMRMMRCIQKHHE 246
Query: 334 -WPELSGNLCTQGNDTLLHVLPMS---------SLKFETLKDYLKPYGNQYAAVLAFRPT 383
++ T N T +HV+PM + +Y K +Y V+AF PT
Sbjct: 247 SSSQIVQRCTTDPNATDIHVIPMGLAGELWPYFQPNYWACAEYAKALETEYTKVVAFIPT 306
Query: 384 GWTYSETVGNQLDLIRPLSRG-NITIYGVPYSEHSSFTELREFVQ 427
GW + + +G + I + YSEHSSF+EL+ FV+
Sbjct: 307 GWADGSKWNKKNATSKFDCKGIEVEIRLISYSEHSSFSELKTFVE 351
>gi|449271670|gb|EMC81954.1| DNA cross-link repair 1B protein, partial [Columba livia]
Length = 450
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 151/298 (50%), Gaps = 31/298 (10%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHP 192
VD + +FL+H H DH GL W P+YCSPLTARL+ L V +I P
Sbjct: 1 VDFWSVRKAGSARLFFLSHMHSDHTVGLTSTWCR-PLYCSPLTARLLHRRLQVPMCWIRP 59
Query: 193 LELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLV 249
LE+ HV+ V VTLL++NHCPG+ + F G L+TGDFR S MQ P L
Sbjct: 60 LEVGQSHVLGEEVTVTVTLLDSNHCPGSVMFLFEGAFG-TILYTGDFRYSSSMQGEPALR 118
Query: 250 NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFL 309
++ LYLD T+C+P+ PS++ R + ++ P+ VV+G YS+GKE++ +
Sbjct: 119 GRHIDRLYLDNTHCHPEQALPSRQ----LATRQAAHLIRTHPQHHVVIGVYSLGKETLLV 174
Query: 310 AISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKP 369
++ + + R ++ + P++ ++ + + ++ ++++TL +
Sbjct: 175 DLAMEFSTWVVVSPWRLEQMRLLELPDV---FTSEEGAGWIRAVDVAEIRWDTLVTW--- 228
Query: 370 YGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
N +A PTG RP+ + I+ +PYS+HSSF EL EFV+
Sbjct: 229 --NTLHPTIAILPTG--------------RPVKVTHPKIHTIPYSDHSSFLELCEFVK 270
>gi|302781672|ref|XP_002972610.1| hypothetical protein SELMODRAFT_97697 [Selaginella moellendorffii]
gi|300160077|gb|EFJ26696.1| hypothetical protein SELMODRAFT_97697 [Selaginella moellendorffii]
Length = 243
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 120/208 (57%), Gaps = 7/208 (3%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
PF+K+IPGT F VD S AYFLTHFH DHY GL W G I+CS +T LV
Sbjct: 36 PFHKRIPGTRFVVDGLGAQCAGDWSRAYFLTHFHGDHYAGLAPSWDKGMIFCSQVTGHLV 95
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL-QDGQCYLHTGDFRA 238
L V ++ L +N+ ID +VTL++ANHCPGA + + G ++HTGD R
Sbjct: 96 VGALGVRRDFVVELAMNSVIWIDECQVTLVDANHCPGAVQFLVEVPEHGTRFVHTGDMRF 155
Query: 239 SRLMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL----KKQPKT 293
+ +M+ L N + ++LDTTYCNPK+ FP++E+ ++Y+ + + + Q +T
Sbjct: 156 TPVMKEDASLCNFVGADAVFLDTTYCNPKFVFPAQEESISYIAETIERMMLQEERSQQRT 215
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYA 321
L ++ Y IGKE + LA+++ IY
Sbjct: 216 LFLISTYVIGKEKILLAVAERCKCMIYV 243
>gi|123477722|ref|XP_001322027.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
gi|121904865|gb|EAY09804.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
Length = 381
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 159/321 (49%), Gaps = 42/321 (13%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
+PGT FTVD + ++ FL+H H DH G G S ++C+P+TA++V +
Sbjct: 24 VPGTAFTVD-WHAHTLPEYIHSFLSHAHTDHLAGAGSFRSPRVMHCTPITAKMVLLKYPK 82
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----RL 241
I E+ + IDG K+T L ANH PG+A+ F L +G+ LHTGDFRA +
Sbjct: 83 LNGCIETHEIGSTIEIDGTKITFLAANHTPGSAMFFFELPNGKKILHTGDFRAEPEVVEV 142
Query: 242 MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYS 301
++Y V+ LY+D TY K +F S++D +++++ K + +LVV+G Y+
Sbjct: 143 ARNY-----GPVDRLYMDCTYACSKLQFVSRKDCVSFIIEKVKEAMNNN--SLVVIGTYT 195
Query: 302 IGKESVFLAISKALGVKIYANASRRRVLQ-----SFDWPELSGNLCTQGNDTLLHVLPMS 356
IGKE + + + A KIYA +R LQ F PEL T +H+LP+
Sbjct: 196 IGKEELVIEAANATCQKIYAPKARFETLQGLINSGFAKPEL---FSEDPYLTRIHLLPIQ 252
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRG---------NIT 407
E + Y G + +V A RP+GW RP R +T
Sbjct: 253 ECGKEKVSLYAASMG--FDSVTAIRPSGWNG-----------RPFWRCPTFDIYNEIKVT 299
Query: 408 IYGVPYSEHSSFTELREFVQV 428
Y VPYS+HSS EL EFV+
Sbjct: 300 SYDVPYSDHSSPMELTEFVKA 320
>gi|58269998|ref|XP_572155.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57228391|gb|AAW44848.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 811
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 104/191 (54%), Gaps = 27/191 (14%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I G +AY LTH H DHY L K W++GPIYCS TA
Sbjct: 319 RRAPFYKVLTGMPVAVDAFRYGAIPGVTAYLLTHAHSDHYTNLSKSWNNGPIYCSQTTAN 378
Query: 178 LVRMCLLVNPSYIH------PLELNTEHVIDGVKVTLLEANHCPGAALIHFR----LQDG 227
L+ L V+P ++H P E+ GV VT +EANHCPG+++ F + G
Sbjct: 379 LIIHMLEVDPKWVHGLPNDMPFEMPN---TGGVTVTPIEANHCPGSSIFLFEGRQTVNAG 435
Query: 228 QC--------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKE 273
YLH GDFRA+ M +P + +N YLDTTY NPKY FP +
Sbjct: 436 DSGFASPYVGSKRVFRYLHCGDFRANPKMVLHPAIARAPINTCYLDTTYLNPKYCFPPQP 495
Query: 274 DVLNYVVRLTK 284
V+N L +
Sbjct: 496 LVINACATLAR 506
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 20/159 (12%)
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND 347
+ + +TLVVVG YSIGKE + A++KA+G KIY + ++ +L PEL L + +
Sbjct: 597 RAKSRTLVVVGTYSIGKERIVKAVAKAIGSKIYCDQRKKGILLCQTDPELHSMLTSDPIE 656
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL----------DL 397
+H+LP+ +++ + L+ YL + VL FRPTGW+YS G + D
Sbjct: 657 AQVHLLPLGNIQLDRLQSYLTLLHPHFDRVLGFRPTGWSYSPPAGTDMLPDVNTIIRRDQ 716
Query: 398 IRPLSRG----------NITIYGVPYSEHSSFTELREFV 426
R G N +YGVPYSEHSSF EL F
Sbjct: 717 ARRFGEGDLKTMRGSSRNFMMYGVPYSEHSSFFELTCFA 755
>gi|134113669|ref|XP_774419.1| hypothetical protein CNBG0650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257057|gb|EAL19772.1| hypothetical protein CNBG0650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 811
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 104/191 (54%), Gaps = 27/191 (14%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAFRYG+I G +AY LTH H DHY L K W++GPIYCS TA
Sbjct: 319 RRAPFYKVLTGMPVAVDAFRYGAIPGVTAYLLTHAHSDHYTNLSKSWNNGPIYCSQTTAN 378
Query: 178 LVRMCLLVNPSYIH------PLELNTEHVIDGVKVTLLEANHCPGAALIHFR----LQDG 227
L+ L V+P ++H P E+ GV VT +EANHCPG+++ F + G
Sbjct: 379 LIIHMLEVDPKWVHGLPNDMPFEMPN---TGGVTVTPIEANHCPGSSIFLFEGRQTVNAG 435
Query: 228 QC--------------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKE 273
YLH GDFRA+ M +P + +N YLDTTY NPKY FP +
Sbjct: 436 DSGFASPYVGSKRVFRYLHCGDFRANPKMVLHPAIARAPINTCYLDTTYLNPKYCFPPQP 495
Query: 274 DVLNYVVRLTK 284
V+N L +
Sbjct: 496 LVINACATLAR 506
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 20/159 (12%)
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND 347
+ + +TLVVVG YSIGKE + A++KA+G KIY + ++ +L PEL L + +
Sbjct: 597 RAKSRTLVVVGTYSIGKERIVKAVAKAIGSKIYCDQRKKGILLCQTDPELHSMLTSDPIE 656
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL----------DL 397
+H+LP+ +++ + L+ YL + VL FRPTGW+YS G + D
Sbjct: 657 AQVHLLPLGNIQLDRLQSYLTLLHPHFDRVLGFRPTGWSYSPPAGTDMLPDVNTIIRRDQ 716
Query: 398 IRPLSRG----------NITIYGVPYSEHSSFTELREFV 426
R G N +YGVPYSEHSSF EL F
Sbjct: 717 ARRFGEGDLKTMRGSSRNFMMYGVPYSEHSSFFELTCFA 755
>gi|395842195|ref|XP_003793904.1| PREDICTED: 5' exonuclease Apollo [Otolemur garnettii]
Length = 530
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+R L V
Sbjct: 6 IPHTPIAVDFWSLRRAGAARLFFLTHMHSDHTVGLSSTWAR-PLYCSPITAHLLRRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDDIGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M + P L+ +++ LYLD T CNP PS+++ + +V+L ++K P+ + +
Sbjct: 124 TPSMLNEPALMFRKQIDTLYLDNTNCNPDMVLPSRQEAAHQIVQL----IQKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ ++ + + R ++Q L+ + +HV+ +
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLG---LADVFTVEEKAGRIHVVDHTE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ T+ + NQ +A PT R + + I+ +PYS+HS
Sbjct: 237 ICHSTMLHW-----NQTHPTIAILPTS--------------RKIHSSHPGIHIIPYSDHS 277
Query: 418 SFTELREFV 426
SF+ELR FV
Sbjct: 278 SFSELRAFV 286
>gi|344304626|gb|EGW34858.1| hypothetical protein SPAPADRAFT_69243 [Spathaspora passalidarum
NRRL Y-27907]
Length = 638
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 187/415 (45%), Gaps = 120/415 (28%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-----------------IYCSPL 174
+VDAF Y S YFL+HFH DHYGG+ K+W++ IYCS +
Sbjct: 157 SVDAFCYAPHDTISQYFLSHFHSDHYGGISKKWAYERVFKDDTDFENESKYRRIIYCSVI 216
Query: 175 TARLVRMCLLVNPSYIHPLELNTEHVID------------------GVKVTLLEANHCPG 216
T +L+ + ++P +I LE+ T + I G+ VT + ANHCPG
Sbjct: 217 TGKLLTLHFSIDPKFIKHLEIETRYQIKSYITDIDDGGYESEEQTPGLYVTPISANHCPG 276
Query: 217 AALIHFR---LQDGQC-YLHTGDFRASRLMQSYPLLVNHRV-------NVLYLDTTYCNP 265
+ + F L++ + LH GDFR + + S+PLL + + +YLDTTY +P
Sbjct: 277 STIFLFESIGLENKRTRILHCGDFRVNYEILSHPLLKQFSIDPNSICLDKVYLDTTYMSP 336
Query: 266 KYKFPSKEDVLNYVVRLTKNCLKKQPKT------------------------LVVVGAYS 301
Y FP +E V V + ++ +K++ K+ L++VG Y
Sbjct: 337 AYNFPKQELVCETVATMFQDLMKEETKSTSLFSTWFGIGTQSRITDFWKKKFLILVGTYV 396
Query: 302 IGKESVFLAISKALGVKIYAN--ASRRR---VLQSFDWPELSGNLCTQ-----GNDTLLH 351
IGKE + +AISK L IY + SR + L+++D L L T +D ++H
Sbjct: 397 IGKEKLAIAISKKLNCPIYISNIGSRNKKWDTLKTYDDQYLDSVLTTNDLGDDSSDAIIH 456
Query: 352 VLPMSSL-KFETLKDYL--KPYGNQYAAVLAFRPTGWTYS---------ETVGNQL-DLI 398
++PM+ + + L +Y Y + + RPTGW++S + N L +L
Sbjct: 457 LVPMNIVSSTQELSNYFNHNKYFEYFERCVGLRPTGWSFSPGNHREIKDPEIPNHLQELE 516
Query: 399 RPLSRG-------NI--------------------TIYGVPYSEHSSFTELREFV 426
R +S+ NI IY +PYSEHSSF EL FV
Sbjct: 517 RIMSKSPSFDYLNNILTQVTSTPSKTKGKPDKQLYRIYALPYSEHSSFRELAYFV 571
>gi|449453656|ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
gi|449493187|ref|XP_004159216.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
Length = 428
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 161/335 (48%), Gaps = 61/335 (18%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL-LVNPSYIHPLELNTEHV 200
+G YFLTH H DH GL +WS GP++CS LTA+ + N S + LE+ H
Sbjct: 13 EGSQIYFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKFFPLKFPSFNLSLLRVLEIGLWHS 72
Query: 201 IDGV----------KVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR----ASRLMQSYP 246
I V KV ++A+HCPGA ++ FR D C L+TGDFR + R +
Sbjct: 73 ISLVSPSSGSRKVIKVVAIDAHHCPGAVMLLFR-GDFGCLLYTGDFRWEMSSERANKGRI 131
Query: 247 LLVN----HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302
L+N + V+VLYLD TYCNP Y FPS+E +V + + P+ +++G S+
Sbjct: 132 ALLNALEDNTVDVLYLDNTYCNPSYAFPSREIAARQIV----DIIASHPQHDIIIGVNSL 187
Query: 303 GKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFET 362
GKE + + IS+ LG+K++ R LQ+ + T+ N T + +P S +T
Sbjct: 188 GKEDLLVHISRMLGLKVWVWPER---LQTMHLLGFNNEFTTKTNLTRVRAVPRYSFSIDT 244
Query: 363 LKDYLKPYGNQYAAVLAFRPTG--WTYSETVGN--------------------------- 393
L+ NQ + P+G W G+
Sbjct: 245 LEGL-----NQMRPTIGIMPSGLPWVVRPHEGDGIPSGSLLITRYRQSKLNENGPFLIEK 299
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
Q + +++ + I+ VPYS+H+ F+E++EF+++
Sbjct: 300 QTGKVESVTKLHKYIFSVPYSDHACFSEIQEFIKL 334
>gi|281211444|gb|EFA85608.1| DNA repair metallo-beta-lactamase domain-containing protein
[Polysphondylium pallidum PN500]
Length = 423
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 111/186 (59%), Gaps = 4/186 (2%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R P +K + GT F VD F+Y S + YFL+HFH DHY G+ K W GPIYCS T +
Sbjct: 215 RITPSFKIVKGTNFLVDGFQYKS-EDYKHYFLSHFHSDHYTGITKTWKFGPIYCSFETGK 273
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV L V+ YI + NT I+ V V +L+ANHCPGAA+ F + DG+ LHTGDFR
Sbjct: 274 LVYTKLGVDSEYIKAMPWNTFMKIENVNVAILDANHCPGAAMFLFCV-DGEYTLHTGDFR 332
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M YPLL + ++ LYLD T+C+P+Y FP ++ ++ V + + +TL +
Sbjct: 333 YNSKMADYPLLRDIKLTRLYLDNTFCDPQYVFPPQQQIVREVADIV--ARENDGRTLFLF 390
Query: 298 GAYSIG 303
G +G
Sbjct: 391 GEDIVG 396
>gi|378733176|gb|EHY59635.1| non-specific serine/threonine protein kinase [Exophiala
dermatitidis NIH/UT8656]
Length = 959
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 110/194 (56%), Gaps = 24/194 (12%)
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
K R+CPFYK +PG VDAFRYG ++G +AYFL+HFH DHY GL W HGPIY S
Sbjct: 482 KPAYQRTCPFYKIMPGMFICVDAFRYGKVEGQNAYFLSHFHSDHYIGLTSSWCHGPIYAS 541
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHF-----RL 224
+T L+ L V+P ++ PLE + + GV VT++ ANHCPG++L F +
Sbjct: 542 KVTCNLMVQQLKVDPKWVVPLEFEKKVEVPNTKGVYVTMIPANHCPGSSLYLFEKVVGKN 601
Query: 225 QDGQC----YLHTGDFRASRLMQSYPLL------------VNHRVNVLYLDTTYCNPKYK 268
+DG LH GDFRA ++PLL ++ YLDTTY PKY
Sbjct: 602 KDGSPRLTRILHCGDFRACPAHVTHPLLRPDVVDSITGQTKQQIIDTCYLDTTYLTPKYS 661
Query: 269 FPSKEDVLNYVVRL 282
FPS+ DV++ ++
Sbjct: 662 FPSQHDVIDACAQM 675
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 22/160 (13%)
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND 347
KK+ + LVV+G YSIGKE + L I++AL KIYA S+ R+ + EL+ L +
Sbjct: 739 KKRGRLLVVIGTYSIGKERICLGIARALDSKIYAPPSKMRICACLEDEELNARLTRDPLE 798
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD----------- 396
+H+ + ++ ETL +Y+ + +A V+ FRPTGW+Y +
Sbjct: 799 AQVHMQTLMEIRAETLHEYMSSFKGHFARVVGFRPTGWSYRPPTSRFTENPAVSTVLHSD 858
Query: 397 ------LIRPLS--RGNI---TIYGVPYSEHSSFTELREF 425
+R L+ RG+ +GVPYSEHSSF EL F
Sbjct: 859 GWKTRYSMRDLAPQRGSTRESNCFGVPYSEHSSFRELTMF 898
>gi|255715219|ref|XP_002553891.1| KLTH0E09570p [Lachancea thermotolerans]
gi|238935273|emb|CAR23454.1| KLTH0E09570p [Lachancea thermotolerans CBS 6340]
Length = 595
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 171/361 (47%), Gaps = 68/361 (18%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190
VD F + S YFL+HFH DHY G+ K W G IYCS +TA L+ V I
Sbjct: 197 INVDGFNFQSDPSIHQYFLSHFHADHYMGVKKSWDQGTIYCSKVTADLLIYKFKVPQDRI 256
Query: 191 HPLELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDG-----QCYLHTGDFRASRLMQS 244
L T + V V +ANHCPGA + FR G Q LHTGDFR++ + +
Sbjct: 257 IALPAEVTIQISSNVSVICFDANHCPGAFVFLFREFGGDNETVQWVLHTGDFRSNNDLIT 316
Query: 245 YPLLVNHR----VNVLYLDTTYCNPKYKFPSKEDVLN----YVVRLTKNCLKK------- 289
++ H ++ +YLDTTY P Y FP ++ VL+ + +L LKK
Sbjct: 317 K--IIEHTSGKPIDKVYLDTTYMYPSYHFPLQKSVLDVTGEFAFKLRDVGLKKLFGDRQS 374
Query: 290 ----------QPKTL----VVVGAYSIGKESVFLAISKALGVKIYA--NASRRRVLQSFD 333
+P+ L V+G Y+IGKE + +AI++ L KI+ + +R ++Q++
Sbjct: 375 SIMSFVSNSLRPRHLYKYVFVIGTYTIGKEKLAIAIAERLQTKIFVARDTARHCIIQTYK 434
Query: 334 WPELSGNLCTQGNDTLLHVLPMSSLKF-ETLKDYLKPYGNQYAAVLAFRPTGWTY----- 387
G + +H++ + +L ETL+ Y KP + Y ++AF PTGW++
Sbjct: 435 DKFPEGMITHDITKACVHLVSLRTLSSKETLQYYFKPISHIYEDMVAFAPTGWSFKNGGR 494
Query: 388 --------SETVGNQLDLIRPLSRGNI---------------TIYGVPYSEHSSFTELRE 424
+ + + ++L++ + N+ ++ VPYSEHSSF +L
Sbjct: 495 FIKLHETLEQKIEHTVNLLKDSTVDNLDPSSIHKQYKRDVRFQVFQVPYSEHSSFKDLAN 554
Query: 425 F 425
F
Sbjct: 555 F 555
>gi|366992608|ref|XP_003676069.1| hypothetical protein NCAS_0D01250 [Naumovozyma castellii CBS 4309]
gi|342301935|emb|CCC69706.1| hypothetical protein NCAS_0D01250 [Naumovozyma castellii CBS 4309]
Length = 618
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 167/369 (45%), Gaps = 78/369 (21%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190
VD F Y S S YFL+HFH DH GL K W+ G I+CSP T+ L++ P I
Sbjct: 214 LVVDGFNYSSKPTISQYFLSHFHSDHTIGLVKSWNQGTIFCSPETSLLLQWRYDFAPEMI 273
Query: 191 HPLEL-NTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY-------LHTGDFRASRLM 242
L + E + D + V +A HCPG+ + F D Q LHTGDFR + +
Sbjct: 274 KELHIAQREWITDTISVISYDAFHCPGSLIFVFEEWDSQSMNTLNKRVLHTGDFRCNNQV 333
Query: 243 QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL--------------- 287
S + + H + +YLDTTY + Y+FP ++ V+ + K+ +
Sbjct: 334 LSNVMSLGH-YDQVYLDTTYLDSWYRFPRQDSVVETTGQFAKDVMEIGLKKLFGDDQKSI 392
Query: 288 ------------KKQPKTLVVVGAYSIGKESVFLAISKALGVKIY------ANASRRRVL 329
+ Q L ++G+YS+GKE + L I L + Y NA R ++
Sbjct: 393 FSFMKSQNKKRSRPQSSVLFLIGSYSLGKEKIGLEIQSHLPLGTYNKIFMNGNAVRGKLF 452
Query: 330 QSFDWPELSGNLCTQGNDTLLHVLPMSSLKF-ETLKDYLKPYGNQ--YAAVLAFRPTGWT 386
+ +Q N +H++ +S L+ ET++DYLK + +Q + V+ F PTGWT
Sbjct: 453 AQDERFTSDREDMSQCN---IHIVSLSVLQCKETVEDYLKSFPDQCGFDDVVGFVPTGWT 509
Query: 387 YS---------ETVGNQLDLIRPLSRG---------------------NITIYGVPYSEH 416
+S E + ++++ +R + G I+ +PYSEH
Sbjct: 510 FSNRYKGKQTFENMNDRVEFVRGIIEGGKREDDEMSIDWITKQYKKYERFQIFKIPYSEH 569
Query: 417 SSFTELREF 425
SSF EL F
Sbjct: 570 SSFKELCSF 578
>gi|354543880|emb|CCE40602.1| hypothetical protein CPAR2_106370 [Candida parapsilosis]
Length = 737
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 204/481 (42%), Gaps = 142/481 (29%)
Query: 87 SEANCLFSPPMKKLKA---SNGKSTATHLKKIVDRSCPFYKKIPGTPF--TVDAFRYGSI 141
+E N P + K A S+ KS + + + P KK G+ + +VDAF +
Sbjct: 194 TETNTDKKPKIIKPPATGTSSSKSRRNEISALKTMTFPVEKK-SGSNYQVSVDAFCFAPH 252
Query: 142 KGCSAYFLTHFHYDHYGGLGKRWSHGP-----------------IYCSPLTARLVRMCLL 184
YFLTHFH DHYGG+ K+W++ IYC+ +T +L+ +
Sbjct: 253 AVIDKYFLTHFHADHYGGISKKWAYDRVFKDDTDYDNDAKYKRIIYCTEITGKLLTLYFS 312
Query: 185 VNPSYIHPLELNTEHVID-------------------GVKVTLLEANHCPGAALIHFRL- 224
++P +I + ++T + + G+ VT + ANHCPGA + F
Sbjct: 313 IDPRFIKQMAMDTRYKVKDYGLADVADGGFKSVEDTPGLYVTPITANHCPGAGIFLFESI 372
Query: 225 -QDGQCY--LHTGDFRASRLMQSYPLLVNH-----------RVNVLYLDTTYCNPKYKFP 270
DG+ + LH GDFR + + +PLL R++ +YLDTTY NP Y FP
Sbjct: 373 GLDGRIHRILHCGDFRVNMTILDHPLLRQFSVASQRIEDLLRIDKVYLDTTYMNPTYNFP 432
Query: 271 SKEDVLNYVVRLTKNCLKKQPKT----------------------------------LVV 296
+E V V +L ++ ++ L++
Sbjct: 433 KQELVCETVAQLFEHLTVQEDNKLSNTLFNNWFGVLTQSRITDFWKPTPTVKKKKKFLIL 492
Query: 297 VGAYSIGKESVFLAISKALGVKIYA-NASRRR----VLQSFDWPELSGNLC------TQG 345
VG Y IGKE + +AISK L IYA N + R+ +L+S+D L L G
Sbjct: 493 VGTYVIGKERLAIAISKRLHCPIYASNINNRKNKYDILRSYDDDYLDSVLTDDELGRDSG 552
Query: 346 NDTLLHVLPMSSL-KFETLKDYL--KPYGNQYAAVLAFRPTGWTYSETVGNQ---LDLIR 399
++ ++H++PM+ + + L +Y Y + + RPTGW++++ ++ D I+
Sbjct: 553 SECIVHLVPMNIVGSVQELSNYFNHNRYYESFERCVGLRPTGWSFAQNGKSEPEPSDTIQ 612
Query: 400 PLSRGNIT----------------------------------IYGVPYSEHSSFTELREF 425
P S G + IY +PYSEHSSF EL F
Sbjct: 613 PTSLGAVAKLMANTTLYTYMDHILSQVPKSRGKNKPDQELYRIYSIPYSEHSSFRELAYF 672
Query: 426 V 426
V
Sbjct: 673 V 673
>gi|260837252|ref|XP_002613619.1| hypothetical protein BRAFLDRAFT_226963 [Branchiostoma floridae]
gi|229299005|gb|EEN69628.1| hypothetical protein BRAFLDRAFT_226963 [Branchiostoma floridae]
Length = 302
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 161/313 (51%), Gaps = 40/313 (12%)
Query: 126 IPGTPFTVDAFRYGS--IKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
IP TPF VD +R + G +FLTH H DH GL W H PIYCS +TA+L+
Sbjct: 6 IPHTPFAVDFWRSRQCDLTGTRLFFLTHMHADHTSGLSPSWKH-PIYCSEVTAKLLICKF 64
Query: 184 LVNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+ P+ + PL + H++ + + VT+ +ANHCPGA + F+ G + +TGDF
Sbjct: 65 DITPALVRPLAVGESHILPLDETGQETMTVTVFDANHCPGAVMFLFQGYFGSIF-YTGDF 123
Query: 237 RASRLMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
R S M + +L N + ++VLYLD TYC+P+ KFPS+ + ++ K+ + + P +
Sbjct: 124 RYSPEMFDHEVLANRQSIDVLYLDNTYCSPECKFPSRTE----ATQMIKDIICRHPGHDI 179
Query: 296 VVGAYS--IGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL 353
V+G S +GKE + + ++ + R L+ + P N+ T D + V
Sbjct: 180 VLGVSSNALGKEDMLVELAMTFQTWVVVTPQRLETLKLLELP----NVFTDREDGRIWV- 234
Query: 354 PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPY 413
+LK++ + ++ + + RPT + ++ LD G ++ VPY
Sbjct: 235 ---TLKYQITRKNIERWNQE-------RPTIAIIASSLYAGLD-------GISHVHVVPY 277
Query: 414 SEHSSFTELREFV 426
S+HSS+ EL EFV
Sbjct: 278 SDHSSYRELHEFV 290
>gi|45188123|ref|NP_984346.1| ADR250Cp [Ashbya gossypii ATCC 10895]
gi|44982940|gb|AAS52170.1| ADR250Cp [Ashbya gossypii ATCC 10895]
gi|374107561|gb|AEY96469.1| FADR250Cp [Ashbya gossypii FDAG1]
Length = 473
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 185/400 (46%), Gaps = 77/400 (19%)
Query: 101 KASNGKSTATHLKKIVDRSCPFYKKIP--GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYG 158
+A+ G S A + I P KK+ T VD F Y AYFL+HFH DHY
Sbjct: 38 RATGGTSGAARKRSI---PLPDVKKVRFRDTTLVVDGFMYMDDPTVDAYFLSHFHADHYQ 94
Query: 159 GLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGV-KVTLLEANHCPGA 217
GL W GP+YCS +TARL + I L H I + + L+ANHCPG+
Sbjct: 95 GLCPSWKQGPLYCSAITARLAMHKFKIPQELITVLYPGVPHKISPILRCIPLDANHCPGS 154
Query: 218 ALIHFRLQDGQCY-----LHTGDFRASRLMQS--YPLLVNHRVNVLYLDTTYCNPKYKFP 270
++ F D Q + LHTGDFRA+ M + L + ++ +YLDTTY +P Y FP
Sbjct: 155 LILLFEEFDDQGHVRQSILHTGDFRATPSMATELSQLTGSRPIDTVYLDTTYLHPYYHFP 214
Query: 271 SKEDVL----NYVVRLTKNCLK-----KQPKTLV------------------VVGAYSIG 303
+E V+ ++ +L+ L+ KQ L ++G+YSIG
Sbjct: 215 LQESVIATTADFAAKLSDVGLRAYFADKQKSILTFTKRRESHKHIIKFRYLYLIGSYSIG 274
Query: 304 KESVFLAISKALGVKIY--ANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF- 360
KE + +AIS+ L K+Y ++ +R+++ + G + +++ +H++P +
Sbjct: 275 KERLAVAISERLRTKLYVRSDTVKRKLIDRYKEWFPDGLITHVASESCVHLVPFEVISSK 334
Query: 361 ETLKDYLKPYGNQYAAVLAFRPTGWTYS--------ETVGNQL-----------DLIRPL 401
+++ +Y+K Y V+AF PTGW Y+ + + + DL+
Sbjct: 335 DSISNYMKVLPPIYEDVIAFSPTGWAYANRLRYIPEQAIRERFACPDKRYKFVTDLLHDA 394
Query: 402 SRGNIT---------------IYGVPYSEHSSFTELREFV 426
+ + T ++ +PYSEHSSF +L F
Sbjct: 395 TVDSFTTDSLKTQYNQSKRYQLFRIPYSEHSSFKDLSIFA 434
>gi|126311625|ref|XP_001382039.1| PREDICTED: 5' exonuclease Apollo-like [Monodelphis domestica]
Length = 567
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSPL+ARLV L V
Sbjct: 6 IPHTPIAVDLWNLRRAGSARLFFLTHLHADHTEGLSSTWAR-PLYCSPLSARLVHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR- 237
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
++Q L + +++ LYLD T C+P PS+++ + + L +++ P+ V +
Sbjct: 124 TPSMLQEPALRLGKQIHTLYLDNTNCDPSLVLPSRQEATHQITEL----IRQHPQHDVKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + + + R V+Q EL+ + +H + +
Sbjct: 180 GLYSLGKESLLEQLGLEFQTWVVLSPQRMEVVQLM---ELASVFTVEEGAGRIHAVNRAE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + + N+ +A PT R + + I+ +PYS+HS
Sbjct: 237 VSWSAMLQW-----NRTHPTIAILPTS--------------RRIHISHPGIHVIPYSDHS 277
Query: 418 SFTELREFV 426
SF+EL +FV
Sbjct: 278 SFSELCDFV 286
>gi|413918212|gb|AFW58144.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
Length = 233
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 112/214 (52%), Gaps = 58/214 (27%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSCL-----LQTERKLK----- 71
D+NGFP+ + FA+DFYR GTDWS L L R+
Sbjct: 27 DDNGFPALPSS---------PAACSSGFAEDFYRSGTDWSSLRAPPPLGPPRRAPGVKER 77
Query: 72 ------QANLFDMWGLK---------SNSESEANCLFS------PPMKKLKASNG----- 105
Q++LF WG++ +S LF P + L A +
Sbjct: 78 GGGSAVQSSLFQAWGIEKPRRDGRGAGDSSLVQRSLFQAWGIERPQREGLGAGDSSPSSS 137
Query: 106 ----------KSTATHLKKIVDR---SCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHF 152
+ +T +++ + +CPFYKKIPGTPFTVDAFRYG ++GCSAYFL+HF
Sbjct: 138 LSGSLLARKRRRGSTEEERVAAKKPLACPFYKKIPGTPFTVDAFRYGQVEGCSAYFLSHF 197
Query: 153 HYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVN 186
H+DHYGGL K+W HGPIYCS LTARLV+MCL VN
Sbjct: 198 HHDHYGGLTKKWCHGPIYCSALTARLVKMCLSVN 231
>gi|291220934|ref|XP_002730478.1| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S.
cerevisiae)-like [Saccoglossus kowalevskii]
Length = 939
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 30/309 (9%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD +R + +FLTH H DH GL W IYCSP++A+L+R +
Sbjct: 6 IPDTPIAVDYWRTRNCPETKLFFLTHMHADHTSGLSPSWK-STIYCSPVSAKLLRAKFEI 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
S I LE+ HVI + + VT ++ANHCPG+ + F G L+TGDFR
Sbjct: 65 QQSLIQSLEVGVGHVIPLDEYGHETMTVTPIDANHCPGSVIYLFVGYFGT-VLYTGDFRY 123
Query: 239 SRLMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L H V+VLYLD TY NP FPS+E+ ++ + ++ P+ V +
Sbjct: 124 TSDMFLNPPLCKHLCVDVLYLDNTYNNPNCLFPSREECTAKIIEI----IQSHPQHDVKL 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G +++GKE++ + I++A+ I + SR L+ P + T+ + +H++
Sbjct: 180 GMHTLGKENLLVDIARAVQEWIVVSPSRYSTLEQLKMPNV---FTTETDAGRIHLVS--- 233
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
++ K +K + N + PT Y+ G +P S ++ VPYS+HS
Sbjct: 234 -SYQITKKIMKKW-NDKRPTIGILPTAL-YTSLNG------QPYSSQK-DVFVVPYSDHS 283
Query: 418 SFTELREFV 426
S+ EL +FV
Sbjct: 284 SYYELFKFV 292
>gi|413918213|gb|AFW58145.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
Length = 256
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 112/214 (52%), Gaps = 58/214 (27%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSCL-----LQTERKLK----- 71
D+NGFP+ + FA+DFYR GTDWS L L R+
Sbjct: 27 DDNGFPALPSS---------PAACSSGFAEDFYRSGTDWSSLRAPPPLGPPRRAPGVKER 77
Query: 72 ------QANLFDMWGLK---------SNSESEANCLFS------PPMKKLKASNG----- 105
Q++LF WG++ +S LF P + L A +
Sbjct: 78 GGGSAVQSSLFQAWGIEKPRRDGRGAGDSSLVQRSLFQAWGIERPQREGLGAGDSSPSSS 137
Query: 106 ----------KSTATHLKKIVDR---SCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHF 152
+ +T +++ + +CPFYKKIPGTPFTVDAFRYG ++GCSAYFL+HF
Sbjct: 138 LSGSLLARKRRRGSTEEERVAAKKPLACPFYKKIPGTPFTVDAFRYGQVEGCSAYFLSHF 197
Query: 153 HYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVN 186
H+DHYGGL K+W HGPIYCS LTARLV+MCL VN
Sbjct: 198 HHDHYGGLTKKWCHGPIYCSALTARLVKMCLSVN 231
>gi|448518002|ref|XP_003867904.1| Pso2 protein [Candida orthopsilosis Co 90-125]
gi|380352243|emb|CCG22467.1| Pso2 protein [Candida orthopsilosis]
Length = 737
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 208/484 (42%), Gaps = 141/484 (29%)
Query: 80 GLKSNSESEANCLFSPPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPF--TVDAFR 137
+++N+E + + PP AS+ S + + + P KK G+ + +VDAF
Sbjct: 194 NIETNTEKKIK-IIKPPATT--ASSSISRRNEISALKTMTFPVDKK-SGSNYQVSVDAFC 249
Query: 138 YGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-----------------IYCSPLTARLVR 180
+ YFLTHFH DHYGG+ K+W++ IYC+ +T +L+
Sbjct: 250 FAPHPVIDKYFLTHFHADHYGGISKKWTYDRVFKDDTDYDNDEKYKRVIYCTEITGKLLT 309
Query: 181 MCLLVNPSYIHPLELNTEHVID-------------------GVKVTLLEANHCPGAALIH 221
+ ++P +I + ++T + + G+ VT + ANHCPGA +
Sbjct: 310 LYFSIDPRFIQQMAMDTRYKVRDYGPVDVADGGFISDEDSPGLYVTPITANHCPGAGIFL 369
Query: 222 FRL--QDGQCY--LHTGDFRASRLMQSYPLLVNH-----------RVNVLYLDTTYCNPK 266
F DG + LH GDFR + + +PLL R++ +YLDTTY NP
Sbjct: 370 FESIGLDGNVHRILHCGDFRVNMTILDHPLLKRFSVSSQRFEDSLRIDKVYLDTTYMNPT 429
Query: 267 YKFPSKEDVLNYVVRL-----------TKNCL----------------------KKQPKT 293
Y FP +E V + + +L T N L K+ K
Sbjct: 430 YNFPKQELVCDTIAQLFEHLTAQDDNITSNDLFNTWFGMLTQSRITDFWKPTSAMKKKKF 489
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYA-NASRRR----VLQSFDWPELSGNLCTQ---- 344
L++VG Y IGKE + +AISK L IYA N + R+ +L++++ L L
Sbjct: 490 LILVGTYVIGKERLAIAISKKLHCPIYASNINNRKNKYDLLRTYEDEYLDSVLTDDELGR 549
Query: 345 --GNDTLLHVLPMSSL-KFETLKDYL--KPYGNQYAAVLAFRPTGWTYSE---------- 389
G++ ++H++PM+ + + L +Y Y + + RPTGW++++
Sbjct: 550 GYGSECIVHLVPMNIVGSVQELSNYFNHNRYYEAFERCVGLRPTGWSFAQNGKKEPESSD 609
Query: 390 -----------------TVGNQLDLI---RPLSRGN-------ITIYGVPYSEHSSFTEL 422
T +D I P +RG IY +PYSEHSSF EL
Sbjct: 610 SIQPTPLQAVADLMANTTTYTYIDNILSQAPKNRGKHKPDQELYRIYSLPYSEHSSFREL 669
Query: 423 REFV 426
FV
Sbjct: 670 AYFV 673
>gi|365989754|ref|XP_003671707.1| hypothetical protein NDAI_0H02910 [Naumovozyma dairenensis CBS 421]
gi|343770480|emb|CCD26464.1| hypothetical protein NDAI_0H02910 [Naumovozyma dairenensis CBS 421]
Length = 754
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 197/438 (44%), Gaps = 113/438 (25%)
Query: 89 ANCLFSPPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTP---FTVDAFRYGSI---K 142
+ LFSP K SN + T +KKI P KKI + VD F Y + K
Sbjct: 260 TSTLFSPK----KPSNNTTDTTTIKKIRP-PLPSIKKIKLSNEKYVVVDGFNYSTSNEKK 314
Query: 143 GCSAYFLTHFHYDHYGGLGKRW-----------SHGPIYCSPLTARLVRMC--LLVNPSY 189
YFL+HFH DH GL K W + IYCSP+T+ L++ +N
Sbjct: 315 KLEYYFLSHFHSDHTIGLCKSWFERNNLNNSTATSPKIYCSPITSLLLQHVYGFKLNEQ- 373
Query: 190 IHPLELNTEHVI------DGVKVTLLEANHCPGAALIHFRLQDGQC-----YLHTGDFRA 238
I LE+N I + ++V +ANHCPG+ + F +++ Q LHTGDFR
Sbjct: 374 IAELEINVPMTIFNDDLEETIEVVAHDANHCPGSLIFIFTIKNVQTQTTRHILHTGDFRC 433
Query: 239 SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC----LKK----- 289
+ M S + + +YLDTTY NP Y+FP+++ V+N + KN LKK
Sbjct: 434 NNEMISKLQKQFKKFDAVYLDTTYLNPLYEFPNQKSVVNITSQFAKNVTQMGLKKFFNNE 493
Query: 290 -----------------QPKTLVVVGAYSIGKESVFLAISKALGV-------KIYANAS- 324
K L +VG+YSIGKE + L I A+ +IY N
Sbjct: 494 QKSIMSYLTTSMKKSNHSNKILFLVGSYSIGKEKIALGILNAISTSLPDDKPRIYINGKT 553
Query: 325 -RRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF-ETLKDYLKPYG---NQYAAVLA 379
R ++ S D T +D+ +H++ +S+L+ E++ YLK + Y ++
Sbjct: 554 IRSKIFSS-DTERFQS---TTPHDSNIHLVSLSTLRSNESISSYLKNLNIKESSYDDIIG 609
Query: 380 FRPTGWTYS----------ETVGNQLDLI----------------------RPLSRGNIT 407
F PTGWT++ +T+ ++LD + +P ++
Sbjct: 610 FVPTGWTFNNRYKKLEFPLDTIDDRLDFLLKEKDILNSSDDFEMDWIKRQYKPFNK--FQ 667
Query: 408 IYGVPYSEHSSFTELREF 425
I+ +PYSEHSSF EL +F
Sbjct: 668 IFKIPYSEHSSFKELCKF 685
>gi|301765736|ref|XP_002918298.1| PREDICTED: DNA cross-link repair 1B protein-like [Ailuropoda
melanoleuca]
Length = 543
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 151/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA LV L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 PKEWIRALEVGESHVLPLDEIGRETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP + PS+++ +V L ++K P+ + +
Sbjct: 124 TPSMLKEPALKLGKQIHTLYLDNTNCNPAWVLPSRQEAARQIVEL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTLEEKAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + R + I+ +PYS+HS
Sbjct: 237 ICHSAMLHW-----NQTHPTIAILPTS--------------RKIHRSHPDIHIIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRTFV 286
>gi|410076722|ref|XP_003955943.1| hypothetical protein KAFR_0B05120 [Kazachstania africana CBS 2517]
gi|372462526|emb|CCF56808.1| hypothetical protein KAFR_0B05120 [Kazachstania africana CBS 2517]
Length = 663
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 172/355 (48%), Gaps = 58/355 (16%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLL 184
I G VD F Y + + YFL+HFH DHY GL K W IYCSP+T++L++
Sbjct: 264 INGFKVVVDGFNYEANSQINDYFLSHFHSDHYIGLKKSWDKADKIYCSPITSKLLQFKFK 323
Query: 185 VNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFR-------LQDGQCYLHTGDF 236
++ I + +H + + VT +ANHCPGA + F+ L+ + LHTGDF
Sbjct: 324 ISADRIVSIPNREKHWITSNISVTPFDANHCPGAQVFLFQEWATKDSLKPMKQILHTGDF 383
Query: 237 RA-SRLMQSY----PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL----NYVVRLTKN-- 285
R+ S L+ + N ++ +YLDTTY + FPS+ +++ +YV+ +
Sbjct: 384 RSNSHLINEIHDFLKVSRNLTIDEVYLDTTYLSQNNNFPSQSEIVTKTTSYVIDFLQKRN 443
Query: 286 -----CLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGN 340
L K K +++VG+YSIGKE + ++IS+ L K+ S R + D L
Sbjct: 444 KRHNILLGKPKKKIILVGSYSIGKEKLAISISRNLKCKMVVYNSELRSVYINDL--LKDM 501
Query: 341 LCTQGNDTLLHVLPMSSLKFET-----LKDYLKPYGNQYAAVLAFRPTGWTYSET----- 390
++T +H++P+ +K E LKD ++ + ++ PTGWT + +
Sbjct: 502 KENSDSETEVHLVPIRMIKDEDSILKYLKDIIQLKWIE-VELIGLIPTGWTMANSWWGMK 560
Query: 391 -----VGNQLDL---IRPLSRGN------------ITIYGVPYSEHSSFTELREF 425
+ N+ + I LS + I+ VPYSEHSSFTEL F
Sbjct: 561 YHKLPLENKFKISSNIEELSLDDDWYKKQVDTYKKFQIFNVPYSEHSSFTELVNF 615
>gi|297472828|ref|XP_002686220.1| PREDICTED: 5' exonuclease Apollo [Bos taurus]
gi|358411414|ref|XP_589521.5| PREDICTED: 5' exonuclease Apollo [Bos taurus]
gi|296489426|tpg|DAA31539.1| TPA: DNA cross-link repair 1B [Bos taurus]
Length = 542
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 151/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDEVGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+E+ +V L ++K P+ + +
Sbjct: 124 TPSMLKEPALRLGKQIHTLYLDNTNCNPDLVLPSQEEAARQIVEL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLERL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + R + I+ +PYS+HS
Sbjct: 237 ICHSAMLRW-----NQTHPTIAILPTS--------------RKIYRSHPNIHVIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRVFV 286
>gi|306755662|sp|D2H8V8.1|DCR1B_AILME RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
gi|281339477|gb|EFB15061.1| hypothetical protein PANDA_006715 [Ailuropoda melanoleuca]
Length = 529
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 151/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA LV L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 PKEWIRALEVGESHVLPLDEIGRETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP + PS+++ +V L ++K P+ + +
Sbjct: 124 TPSMLKEPALKLGKQIHTLYLDNTNCNPAWVLPSRQEAARQIVEL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTLEEKAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + R + I+ +PYS+HS
Sbjct: 237 ICHSAMLHW-----NQTHPTIAILPTS--------------RKIHRSHPDIHIIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRTFV 286
>gi|260809984|ref|XP_002599784.1| hypothetical protein BRAFLDRAFT_166573 [Branchiostoma floridae]
gi|229285066|gb|EEN55796.1| hypothetical protein BRAFLDRAFT_166573 [Branchiostoma floridae]
Length = 319
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 36/312 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TPF VD ++ +FLTH H DH GL W H PIYCS +TA+L+ +
Sbjct: 6 IPHTPFAVDFWKSRQSDHTRLFFLTHMHADHTSGLSPSWKH-PIYCSEITAKLLIHKFDI 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
P+ +H LE+ ++ + + VT+ +ANHCPGA + F+ G + +TGDFR
Sbjct: 65 APALVHTLEVGESRMLPLDETGQETMTVTVFDANHCPGAVMFLFQGYFGSIF-YTGDFRY 123
Query: 239 SRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
S M + +L N ++VLYLD TYC+P+ KFPS+ ++ K+ + + P+ +V+
Sbjct: 124 SPEMFDHEVLANRPSIDVLYLDNTYCSPECKFPSRAQ----ATQMIKDIISRHPEHDIVL 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G +GKE + + ++K + R L+ + P + G + +
Sbjct: 180 GMTMLGKEDMLVELAKTFQTWVVVTPQRLETLKLLELPNVFTTDPEAGRIRV-------A 232
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTY---SETVGNQLDLIRPLSRGNITIYGVPYS 414
LK++ + ++ + NQ +A P+ + NQ D ++ VPYS
Sbjct: 233 LKYQITRKNMERW-NQERPTIAILPSALYTGLDGKPYANQPD-----------VHIVPYS 280
Query: 415 EHSSFTELREFV 426
+HSS EL +FV
Sbjct: 281 DHSSNGELHDFV 292
>gi|50289721|ref|XP_447292.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526602|emb|CAG60229.1| unnamed protein product [Candida glabrata]
Length = 736
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 193/469 (41%), Gaps = 137/469 (29%)
Query: 90 NCLFSPPM------KKLKASNGKSTATHLKKIVDRSC------------PFYKKIP---- 127
NC P+ + K THL+ V++ P +IP
Sbjct: 231 NCFEQKPLSNFIEGRSAMVCQSKKIQTHLESTVEKEVGDKPNPISKSKNPRRNRIPESFK 290
Query: 128 ------GTPFTVDAFRY--GSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
G VD F Y +FL+HFH DHY GL K W+ G +Y SP+T L+
Sbjct: 291 ILTFTSGYQIIVDGFTYPLKEDNKIKDFFLSHFHSDHYIGLKKSWTSGNLYSSPVTYELL 350
Query: 180 -------RMCLLVNPSYIHPLEL----NTEHVIDGVKVTLLEANHCPGAALIHFRLQDG- 227
R N + + L+ N + D + VT L+ANHCPGA+L F D
Sbjct: 351 KYRYTPKRKTNEDNENITNCLKALKPYNRVWLTDTISVTTLDANHCPGASLFLFEEWDSM 410
Query: 228 -----QCYLHTGDFRAS-RLMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVV 280
+ LHTGDFR+ +L++ NHR ++ +YLDTTY + FP++E++LN V
Sbjct: 411 KTGILKTILHTGDFRSDDKLIEEVLKYTNHREIDEIYLDTTYLLSTFTFPAQEELLNMVA 470
Query: 281 RLTKNC----------------------------LKKQPKTLVVVGAYSIGKESVFLAIS 312
R + K + L +VG YSIGKE + + I+
Sbjct: 471 RFIETINNPNFRQSFFGDKQKSIFHFMSLPSSIDKKSEIPMLYLVGTYSIGKEKLAIKIA 530
Query: 313 KALGVKIYANA-SRRRVLQSFDWPELSGN--LCTQGNDTLLHVLPMSSLK-FETLKDYLK 368
+ L KIY + S +R + S W + N L +++ +H++ + L+ F + +YLK
Sbjct: 531 ETLNTKIYVQSNSIKRKMVSIYWDQCFDNSLLTDDPSESQIHLVSLKVLRDFNAIDNYLK 590
Query: 369 PY----GN--QYAAVLAFRPTGWTYSETVGNQ------------------------LDLI 398
GN +Y V F PTGWT+ GN+ +DL+
Sbjct: 591 TIKELTGNKIKYDNVFGFIPTGWTF----GNRYKKDFQYDGELSYDDNFKLRVKYCMDLL 646
Query: 399 -----RPLS-----------------RGNITIYGVPYSEHSSFTELREF 425
RP R I+ VPYSEHSSF EL +F
Sbjct: 647 KQDEARPTQNFADVSSLEWLRMQYKPRERYQIFRVPYSEHSSFRELLKF 695
>gi|73981038|ref|XP_848274.1| PREDICTED: 5' exonuclease Apollo [Canis lupus familiaris]
Length = 530
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 150/310 (48%), Gaps = 38/310 (12%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA LV L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLVHRQLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKRWIRALEVGESHVLPLDEIGRETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ +V L ++K P+ + +
Sbjct: 124 TPSMLKEPALKLGKQIHTLYLDNTNCNPARVLPSRQEAARQIVEL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLP-MS 356
G YS+GKES+ ++ + + R ++Q L+ + +H + M
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLG---LANVFTVEEKAGRIHAVDHME 236
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEH 416
+ L + NQ +A PT R + R + I+ +PYS+H
Sbjct: 237 ICRAAVL------HWNQTHPTIAILPTS--------------RKIHRSHPDIHIIPYSDH 276
Query: 417 SSFTELREFV 426
SSF+EL+ FV
Sbjct: 277 SSFSELQTFV 286
>gi|348586607|ref|XP_003479060.1| PREDICTED: 5' exonuclease Apollo-like [Cavia porcellus]
Length = 533
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 151/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGAARIFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRQLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKRWIRVLEVGESHVLPLDETGRETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M YP L + +++ LYLD T CNP PS+++ + +++L +++ P+ + +
Sbjct: 124 TPSMLKYPALALGKQIHTLYLDNTNCNPALVLPSRQEAAHQIIQL----IRRHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ ++ + + R ++Q L+ + +H +
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLG---LADVFTVEEKAGRIHAVEHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + R + I+ +PYS+HS
Sbjct: 237 ICRSAMLRW-----NQTHPTIAILPTS--------------RQMHRSHPDIHIIPYSDHS 277
Query: 418 SFTELREFV 426
S+TEL FV
Sbjct: 278 SYTELCAFV 286
>gi|440913218|gb|ELR62698.1| 5' exonuclease Apollo, partial [Bos grunniens mutus]
Length = 528
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 150/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDEVGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L +++ LYLD T CNP PS+E+ +V L ++K P+ + +
Sbjct: 124 TPSMLKEPALRPGKQIHTLYLDNTNCNPDLVLPSQEEAARQIVEL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLERL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + R + I+ +PYS+HS
Sbjct: 237 ICHSAMLRW-----NQTHPTIAILPTS--------------RKIYRSHPNIHVIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRVFV 286
>gi|403215975|emb|CCK70473.1| hypothetical protein KNAG_0E02110 [Kazachstania naganishii CBS
8797]
Length = 557
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 182/407 (44%), Gaps = 85/407 (20%)
Query: 91 CLFSPPMKKL--------KASNGKSTATHLKKIVDRSCPFYKKIP---GTPFTVDAFRYG 139
CL +PP + K G T T + R P YK + G VD F Y
Sbjct: 126 CLGAPPARPQGGSKVNSPKKQTGDHTTTPRPR---RRLPAYKILEFTNGHKLVVDGFNYE 182
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEH 199
YFL+HFH DHY GL K W +G +YCS +TA+L+ +H L
Sbjct: 183 KDDCIKEYFLSHFHSDHYQGLKKSWGNGEVYCSYITAQLLCQKFNFPRELVHILNNGERT 242
Query: 200 VI-DGVKVTLLEANHCPGAALIHFRLQDG-----QCYLHTGDFRASRLM----QSYPLLV 249
++ D + V L+ANHCPGA + F+ DG + +HTGDFRA+ M + +
Sbjct: 243 MVHDRISVVPLDANHCPGAQIFLFQEHDGAGRIVKQIIHTGDFRATDAMVVELEKFLPSS 302
Query: 250 NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL--KKQPKT-------------- 293
N ++ +YLDTTY P + P+++ V++ KK+P+T
Sbjct: 303 NSVIDEIYLDTTYMKPNHTHPTQQTVVDVTSSFVTEDWYSKKRPRTVMDFARATPAAPER 362
Query: 294 --LVVVGAYSIGKESVFLAISKALGVKIYA-NASRRRVLQSFDWPELSGNLCTQGNDTLL 350
+V+VG+Y IGKE + L I++ L ++ N ++ R + L G + + +
Sbjct: 363 RKMVLVGSYVIGKEKLALEIARRLDTSVHVQNKNKLRQIV------LDGQM-GDAEHSQV 415
Query: 351 HVLPMSSLKFE-TLKDYLKPYGNQ---YAAVLAFRPTGWTY------SETVGNQLDLIRP 400
H++P+ L+ + + YL+ V+ PTGWT+ S +GN+ + +
Sbjct: 416 HMVPLGILRDDAAISTYLREECRVNWLNVDVIGVVPTGWTFGNRYSTSVEIGNKCEYV-- 473
Query: 401 LSRGNIT---------------------IYGVPYSEHSSFTELREFV 426
+G +T IY VPYSEHS+F EL F+
Sbjct: 474 --KGAVTFESTFDKSWFSGQETPYRKFQIYKVPYSEHSNFVELLRFL 518
>gi|70778966|ref|NP_598626.2| 5' exonuclease Apollo isoform a [Mus musculus]
gi|73620758|sp|Q8C7W7.2|DCR1B_MOUSE RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
gi|74141057|dbj|BAE22098.1| unnamed protein product [Mus musculus]
gi|74152210|dbj|BAE32389.1| unnamed protein product [Mus musculus]
Length = 541
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L++ +++ LYLD T CNP PS+++ +V+L +++ P+ + +
Sbjct: 124 TPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQL----IRQFPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ ++ + + R ++Q L+ + +H + +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHTE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + +IY VPYS+HS
Sbjct: 237 ICHSAMLQW-----NQSHPTIAIFPTS--------------RKVRSPHPSIYTVPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|74216024|dbj|BAE23700.1| unnamed protein product [Mus musculus]
Length = 541
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L++ +++ LYLD T CNP PS+++ +V+L +++ P+ + +
Sbjct: 124 TPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQL----IRQFPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ ++ + + R ++Q L+ + +H + +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHTE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + +IY VPYS+HS
Sbjct: 237 ICHSAMLQW-----NQSHPTIAIFPTS--------------RKVRSPHPSIYTVPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|148675641|gb|EDL07588.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Mus musculus]
Length = 541
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L++ +++ LYLD T CNP PS+++ +V+L +++ P+ + +
Sbjct: 124 TPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQL----IRQFPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ ++ + + R ++Q L+ + +H + +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHTE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + +IY VPYS+HS
Sbjct: 237 ICHSAMLQW-----NQSHPTIAIFPTS--------------RKVRSPHPSIYTVPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|355682949|gb|AER97012.1| DNA cross-link repair 1B [Mustela putorius furo]
Length = 538
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 150/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA LV L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 PKEWIRALEVGESHVLPLDEIGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP + PS+++ +V L ++K P+ + +
Sbjct: 124 TPSMLKEPALKLGKQIHTLYLDNTNCNPAWILPSRQEAARQIVEL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + I+ +PYS+HS
Sbjct: 237 VCHSAMLHW-----NQTHPTIAILPTS--------------RKIRHSHPDIHVIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRTFV 286
>gi|444724691|gb|ELW65290.1| 5' exonuclease Apollo [Tupaia chinensis]
Length = 545
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 154/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA ++ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLTHMHSDHTVGLSSTWAR-PLYCSPITAHILHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDEIGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRF 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ ++ +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALDLPSRQEAAHEIVQL----IRKHPQHIIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR+ L+ +L ++
Sbjct: 180 GLYSLGKESLLEQL--ALEFRTWVVLSPRRL-------------------ELVQLLGLAD 218
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F + + + + + R W + L R + + ++ +PYS+HS
Sbjct: 219 V-FTAEEKAGRIHAVDHMEICHSRMVHWNRTHPTIAILPTSRKIHISHPGVHVIPYSDHS 277
Query: 418 SFTELREFV 426
+++ELR FV
Sbjct: 278 TYSELRAFV 286
>gi|26339774|dbj|BAC33550.1| unnamed protein product [Mus musculus]
Length = 541
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L++ +++ LYLD T CNP PS+++ +V+L +++ P+ + +
Sbjct: 124 TPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEASQQIVQL----IRQFPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ ++ + + R ++Q L+ + +H + +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHTE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + +IY VPYS+HS
Sbjct: 237 ICHSAMLQW-----NQSHPTIAIFPTS--------------RKVRSPHPSIYTVPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|55587856|ref|XP_524804.1| PREDICTED: 5' exonuclease Apollo [Pan troglodytes]
gi|397468053|ref|XP_003805712.1| PREDICTED: 5' exonuclease Apollo [Pan paniscus]
gi|410216116|gb|JAA05277.1| DNA cross-link repair 1B [Pan troglodytes]
gi|410256044|gb|JAA15989.1| DNA cross-link repair 1B [Pan troglodytes]
gi|410289690|gb|JAA23445.1| DNA cross-link repair 1B [Pan troglodytes]
gi|410330025|gb|JAA33959.1| DNA cross-link repair 1B [Pan troglodytes]
Length = 532
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 152/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + I+ +PYS+HS
Sbjct: 237 ICHSNMLRW-----NQTHPTIAILPTS--------------RKIHSSHPDIHVIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|12383082|ref|NP_073747.1| 5' exonuclease Apollo [Homo sapiens]
gi|73620756|sp|Q9H816.1|DCR1B_HUMAN RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B;
Short=SNMIB; Short=hSNM1B
gi|10436338|dbj|BAB14807.1| unnamed protein product [Homo sapiens]
gi|20987357|gb|AAH29687.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Homo
sapiens]
gi|56553109|gb|AAV97812.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Homo
sapiens]
gi|119576986|gb|EAW56582.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
gi|325463825|gb|ADZ15683.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [synthetic
construct]
Length = 532
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 152/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + I+ +PYS+HS
Sbjct: 237 ICHSNMLRW-----NQTHPTIAILPTS--------------RKIHSSHPDIHVIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|355745555|gb|EHH50180.1| hypothetical protein EGM_00966 [Macaca fascicularis]
gi|380815684|gb|AFE79716.1| 5' exonuclease Apollo [Macaca mulatta]
gi|383414005|gb|AFH30216.1| 5' exonuclease Apollo [Macaca mulatta]
Length = 532
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 48/315 (15%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I PLE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIQPLEIGESHVLPLDEIGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQ------SFDWPELSGNLCTQGNDTLLH 351
G Y++GKES+ ++ + + R ++Q F E +G + G+ + H
Sbjct: 180 GLYNLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVGHMEICH 239
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV 411
+ L+ NQ +A PT R + + I+ +
Sbjct: 240 ------------SNMLR--WNQTHPTIAILPTS--------------RKIHSSHPDIHVI 271
Query: 412 PYSEHSSFTELREFV 426
PYS+HSS++EL FV
Sbjct: 272 PYSDHSSYSELCAFV 286
>gi|149708883|ref|XP_001495792.1| PREDICTED: 5' exonuclease Apollo [Equus caballus]
Length = 533
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 151/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP++A L+ L V
Sbjct: 6 IPNTPIAVDFWSLRRAGCARLFFLSHMHSDHTVGLSSTWAR-PLYCSPISAYLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKRWIRALEVGESHVLPLDEIGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L V +++ LYLD T CNP PS+++ +V L ++K P+ + +
Sbjct: 124 TPSMLKEPALRVGKQIHTLYLDNTNCNPALVLPSQQEAARQIVEL----IRKHPQHHIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHVE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + R + I+ +PYS+HS
Sbjct: 237 ICHSAMLHW-----NQTHPTIAILPTS--------------RKICRSHPDIHIIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|426330866|ref|XP_004026426.1| PREDICTED: 5' exonuclease Apollo [Gorilla gorilla gorilla]
Length = 532
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 152/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGTSRLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + I+ +PYS+HS
Sbjct: 237 ICHSNMLRW-----NQTHPTIAILPTS--------------RKIHSSHPDIHVIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|109014448|ref|XP_001110949.1| PREDICTED: DNA cross-link repair 1B protein [Macaca mulatta]
gi|355558293|gb|EHH15073.1| hypothetical protein EGK_01115 [Macaca mulatta]
Length = 532
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 48/315 (15%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I PLE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIQPLEIGESHVLPLDEIGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQ------SFDWPELSGNLCTQGNDTLLH 351
G Y++GKES+ ++ + + R ++Q F E +G + G+ + H
Sbjct: 180 GLYNLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVGHMEICH 239
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV 411
+ L+ NQ +A PT R + + I+ +
Sbjct: 240 ------------SNMLR--WNQTHPTIAILPTS--------------RKIHSSHPDIHVI 271
Query: 412 PYSEHSSFTELREFV 426
PYS+HSS++EL FV
Sbjct: 272 PYSDHSSYSELCAFV 286
>gi|444317116|ref|XP_004179215.1| hypothetical protein TBLA_0B08800 [Tetrapisispora blattae CBS 6284]
gi|387512255|emb|CCH59696.1| hypothetical protein TBLA_0B08800 [Tetrapisispora blattae CBS 6284]
Length = 676
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 175/388 (45%), Gaps = 89/388 (22%)
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRM 181
F K++ VD F Y YFL+HFH DHY G+ K W +G +YCS +TA L+R
Sbjct: 246 FTKEMSNYQIVVDGFNYSINSNIKQYFLSHFHSDHYIGMKKSWRNGVVYCSQITANLLRN 305
Query: 182 CL---LVNPSY----------------IHPLELNTEHVID-GVKVTLLEANHCPGAALIH 221
+ N Y I L +N + I+ + V L++ANHCPGA +
Sbjct: 306 KFNIPITNYDYDEMERSEEEAKEDVMEIVELPMNRPYWINKNISVILIDANHCPGAVIFL 365
Query: 222 FRLQDGQC------YLHTGDFRASRLMQ----SYPLLVNHRVNVLYLDTTYCNPKYKFPS 271
F+ LHTGDFR S M+ Y N +++ +YLDTTY +P Y FP
Sbjct: 366 FQQYSDDLTRIEYQILHTGDFRYSNEMELNILKYLPDYNKKIDEIYLDTTYISPMYNFPL 425
Query: 272 KEDVLNYV---VRLTKNCLKK-----------------QPKTLVVVGAYSIGKESVFLAI 311
+++VL + L ++ K+ Q + ++G+YSIGKE + +AI
Sbjct: 426 QQNVLQVTSQFISLYRDQNKREMFNDKQMKLSMVVNDFQFNKIFLIGSYSIGKERLSIAI 485
Query: 312 SKALGVKIYANASRR-RVLQSFD-WPELSGNLCTQGNDTLLHVLPMSSLKFETLKD-YLK 368
++ L KIY + R+ V+Q + +P +G L + +H++ M++L+ T D Y+K
Sbjct: 486 AQRLQTKIYTSDKRKFEVMQMTEIFP--AGLLSEDLEECQVHIVSMNTLRDSTSVDQYVK 543
Query: 369 PYGNQ------YAAVLAFRPTGWTYS---------ETVGNQLDLIRPL------------ 401
+ V+ PTGWT+ + +++ R +
Sbjct: 544 EINLRSDKKLIANEVVGIIPTGWTFHNRWAPERTFNNINERIEYCRDVLTQDEMDGFSID 603
Query: 402 -------SRGNITIYGVPYSEHSSFTEL 422
S I+ VPYSEHSSF +L
Sbjct: 604 SLYKQYKSMKKYQIFKVPYSEHSSFKDL 631
>gi|402855732|ref|XP_003892469.1| PREDICTED: 5' exonuclease Apollo [Papio anubis]
Length = 532
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 48/315 (15%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I PLE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIQPLEIGESHVLPLDEIGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQ------SFDWPELSGNLCTQGNDTLLH 351
G Y++GKES+ ++ + + R ++Q F E +G + G+ + H
Sbjct: 180 GLYNLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVGHMEICH 239
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV 411
+ L+ NQ +A PT R + + I+ +
Sbjct: 240 ------------SNMLR--WNQTHPTIAILPTS--------------RKIHSSHPDIHVI 271
Query: 412 PYSEHSSFTELREFV 426
PYS+HSS++EL FV
Sbjct: 272 PYSDHSSYSELCAFV 286
>gi|332237717|ref|XP_003268053.1| PREDICTED: 5' exonuclease Apollo [Nomascus leucogenys]
Length = 531
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 152/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + I+ +PYS+HS
Sbjct: 237 ICHSNMLRW-----NQTHPTIAILPTS--------------RKIHSSHPDIHVIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|306755667|sp|Q4KLY6.2|DCR1B_RAT RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
Length = 541
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 150/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEIGESHVLLLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ +++L +++ P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEATQQIIQL----IRQFPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ ++ + + R ++Q L+ + +H +
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + +IY +PYS+HS
Sbjct: 237 ICHSAMLQW-----NQTHPTIAIFPTS--------------RKIRSPHPSIYSIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|321261541|ref|XP_003195490.1| hypothetical protein CGB_G0680W [Cryptococcus gattii WM276]
gi|317461963|gb|ADV23703.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 833
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 104/209 (49%), Gaps = 45/209 (21%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLT------------------HFHYDHYGG 159
R PFYK + G P VDAFRYG+I G +AY LT H H DHY
Sbjct: 323 RRAPFYKVLTGMPVAVDAFRYGAIPGVTAYLLTYVISINFTLLSQLTEKNRHAHSDHYTN 382
Query: 160 LGKRWSHGPIYCSPLTARLVRMCLLVNPSYIH------PLELNTEHVIDGVKVTLLEANH 213
L K W++GPIYCS TA L+ L V+P ++H P E+ GV VT +EANH
Sbjct: 383 LSKSWNNGPIYCSETTANLIIHMLEVDPKWVHGLPNDVPFEMPN---TGGVTVTPIEANH 439
Query: 214 CPGAALIHFR----LQDGQC--------------YLHTGDFRASRLMQSYPLLVNHRVNV 255
CPG+++ F + G YLH GDFRA+ M +P + +N
Sbjct: 440 CPGSSIFLFEGRQTVNAGDSGFASPYVGSKRVFRYLHCGDFRANPQMVLHPAIARAPINT 499
Query: 256 LYLDTTYCNPKYKFPSKEDVLNYVVRLTK 284
YLDTTY NPKY FP + V+N L +
Sbjct: 500 CYLDTTYLNPKYCFPPQPLVINACATLAR 528
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 84/159 (52%), Gaps = 20/159 (12%)
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND 347
K + +TLVVVG YSIGKE + AI+KA+G KIY + ++ +L PEL L + +
Sbjct: 619 KAKSRTLVVVGTYSIGKERIVKAIAKAIGSKIYCDQRKKGILLCQTDPELHSMLTSDPIE 678
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL----------DL 397
+H+LP+ +++ + L+ YL + VL FRPTGW+YS G + D
Sbjct: 679 AQVHLLPLGNIQLDRLQSYLTLLYPHFDRVLGFRPTGWSYSPPAGTDMLPDVNTVIRRDQ 738
Query: 398 IRPLSRG----------NITIYGVPYSEHSSFTELREFV 426
R G N +YGVPYSEHSSF EL F
Sbjct: 739 ARRFGEGDLKTMRGSSRNFMMYGVPYSEHSSFFELTCFA 777
>gi|399218889|emb|CCF75776.1| unnamed protein product [Babesia microti strain RI]
Length = 452
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 170/382 (44%), Gaps = 92/382 (24%)
Query: 130 PFTVDAFRYGSIKG--------CSA----YFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
P +D F + G C+ YFLTHFH DHYGG+GK WS IY S +T
Sbjct: 14 PLVIDMFHRNKLNGWIDFKRLKCTVSELKYFLTHFHSDHYGGIGKTWS-NTIYTSHITGT 72
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV L VNP YI L+LN + + + + ANHCPG+ +I F G+ LHTGDFR
Sbjct: 73 LVEKVLGVNPKYICKLQLNRVYKLCNFTFSFVGANHCPGSVMIIFEFVSGKRILHTGDFR 132
Query: 238 AS----------------------------------------RLMQSYPLLVNHRV--NV 255
+L+ L++ V ++
Sbjct: 133 YHNTILKSLNIQAPDTTCDLSDVDLLFLTDYESDDSNHDTELKLVDKTATLIDANVIFDI 192
Query: 256 LYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK-QPKTLVVVGAYSIGKESVFLAISKA 314
+ +DTT+ K FP+++ V+ V+ N LK+ K L + G+Y +GKE ++ +++
Sbjct: 193 VLMDTTFSLIKGVFPTQDVVIAQVIEDVSNHLKECSGKCLFLFGSYLLGKERLYFSVAHK 252
Query: 315 LGVKI-YANASRRRVLQSF-----------DWPELSGNLCTQGNDTLLHVLPMSSL---- 358
+ I +AN + +++ S + +++GN T G ++H++ + L
Sbjct: 253 FAMPIVFANQKQHKIITSLPLKSKYFSLISNTHDINGNDITNGVTGIIHIVSLHLLGTVY 312
Query: 359 -----KFETLKDYLKPYGNQYAA------VLAFRPTGWTYS-ETVGNQLDLIRPLSRGNI 406
+ +++YL N A+ V+A+ PTGW + NQ N+
Sbjct: 313 PRFIPNMKWIENYLTEVNNNTASCAEFDRVVAYLPTGWAHKFHMKSNQYK--------NV 364
Query: 407 TIYGVPYSEHSSFTELREFVQV 428
V YSEHSS +E+ +FV V
Sbjct: 365 YATSVSYSEHSSASEIEQFVSV 386
>gi|149030435|gb|EDL85472.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Rattus norvegicus]
Length = 541
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 150/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEIGESHVLPLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ +++L +++ P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEATQQIIQL----IRQFPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ ++ + + R ++Q L+ + +H +
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + +IY +PYS+HS
Sbjct: 237 ICHSAMLQW-----NQTHPTIAIFPTS--------------RKIRSPHPSIYSIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|159489990|ref|XP_001702972.1| predicted protein [Chlamydomonas reinhardtii]
gi|158270879|gb|EDO96710.1| predicted protein [Chlamydomonas reinhardtii]
Length = 760
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 111/194 (57%), Gaps = 8/194 (4%)
Query: 231 LHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
LHTGD R R M+ P L RV+ LYLDTTY P+++ P + + + +V+ + + ++
Sbjct: 299 LHTGDMRWQRWMRDQPGLAGVRVDTLYLDTTYALPRHRLPPQTEAIAMMVQAMREAVAEE 358
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW-PELSGNLCTQGNDTL 349
P TL VV AY IGKE FL ++ LG K++A +R+VL D PE + L +
Sbjct: 359 PATLFVVAAYHIGKERAFLGAAQQLGAKVWAAPDKRKVLALLDLAPEQAALLEERPEAAD 418
Query: 350 LHVLPMSSLKFETLKDYLKPY-GNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITI 408
+HV LK E L+ YL + G+++ V+ RPTGWT+ G + G ++I
Sbjct: 419 IHVGGW-GLKHEELQAYLASHKGSRWKRVVGIRPTGWTFRRKGG-----VSVWREGEVSI 472
Query: 409 YGVPYSEHSSFTEL 422
GVPYSEHSS+T+L
Sbjct: 473 LGVPYSEHSSWTDL 486
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 9/116 (7%)
Query: 109 ATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP 168
AT +++I K + GT F VD F + S K C YFLTH H DH GL K +S G
Sbjct: 2 ATQVERI--------KWVKGTNFIVDGFAFTSPK-CKHYFLTHAHSDHTIGLRKSFSAGV 52
Query: 169 IYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL 224
IYCS +TARL+ + + P + PLE+ VI GV+VT L+ANHCPG+ + F +
Sbjct: 53 IYCSHVTARLLIHDMGIRPEVVRPLEVGVPVVISGVRVTPLDANHCPGSVMFLFEV 108
>gi|406607864|emb|CCH40802.1| DNA cross-link repair 1A protein [Wickerhamomyces ciferrii]
Length = 571
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 160/339 (47%), Gaps = 57/339 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190
VD F++ YFL+H+H DHY GL K+WS G IY S T+ L++ + + I
Sbjct: 196 LNVDGFQFQDHPSIDKYFLSHYHSDHYIGLSKKWSQGIIYTSKTTSNLLQSIMKIPSERI 255
Query: 191 HPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQC-----YLHTGDFRASRLMQS 244
LE H + + +KVTL +ANHCPG A+ F + + LHTGDFR S+ Q
Sbjct: 256 IGLEFGIPHDLTEQIKVTLFDANHCPGGAIFLFEEYNPKGEIIKRILHTGDFRVSK--QH 313
Query: 245 YPLLVNHRVNVLYLDTTYCNPKYKFPSK-----------EDVLNYVVRLTKNCL----KK 289
L + ++ +YLDTTY NP Y F + E ++N + TKN + +
Sbjct: 314 LDLFKDMFLDEIYLDTTYMNPVYTFMLQSLVIKQTCEFLESIINNTI--TKNSILNYFTQ 371
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
L+++G+YSIGKE +++ ++K + KI R + L + L T D
Sbjct: 372 NQDYLILIGSYSIGKEKLYIQLAKTINSKILITKERYKFLSCIENFNLDI-FTTDPKDPS 430
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS--------------ETVGNQL 395
+ +S K K +L + ++ ++ +PTGW+++ + + NQ+
Sbjct: 431 AKIQIISIQKLSDNK-FLSQFSSK--KIIKIKPTGWSFNTFKTLTASIKNKTPQEILNQV 487
Query: 396 ------------DLIRPLSRGNITIYGVPYSEHSSFTEL 422
L++ N + VPYSEHSSF EL
Sbjct: 488 LTPTTPSTDYKTQLLKQFQ--NSSSLSVPYSEHSSFKEL 524
>gi|225447705|ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
gi|296081253|emb|CBI17997.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 154/332 (46%), Gaps = 62/332 (18%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL-VNPSYIHPLELNTEHVID-- 202
YFLTH H DH L W+ GP++CS LTA+L N S + LE+ + H +
Sbjct: 17 VYFLTHLHSDHTQCLSSSWTKGPLFCSRLTAKLFPFKFPNFNLSLLRILEIGSWHSVSLV 76
Query: 203 --------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR------ASRLMQSYPL- 247
V V ++A+HCPGA + FR D C L TGDFR +++ ++ L
Sbjct: 77 SPSSGSETTVDVMAIDAHHCPGAVMYLFR-GDFGCMLFTGDFRWEATNERAKIGRTMLLH 135
Query: 248 -LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKES 306
L RVN+LYLD TYCNP + FPS+E VV + + PK +++G ++GKE
Sbjct: 136 ALEGDRVNILYLDNTYCNPSFSFPSREAAAQQVV----DIIASHPKHDIIIGIDTLGKED 191
Query: 307 VFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDY 366
+ L IS++L VKI+ R + + + ++ T+ + T + +P S TL+
Sbjct: 192 LLLYISRSLKVKIWVWPERLQTMHLLGFHDI---FTTKTSLTRIRAVPRYSFSINTLEGL 248
Query: 367 LKPYGNQYAAVLAFRPTG--WTYSETVG----------------------------NQLD 396
N + P+G W + G N+
Sbjct: 249 -----NTVRPTIGIMPSGLPWVVKPSEGNDNPAGPPSISHHCGNKRIINGGPRAEINKKG 303
Query: 397 LIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
+R + R + IY VPYSEHS F E+ +F+++
Sbjct: 304 KLRSVVRFHQYIYSVPYSEHSCFPEIEDFIKL 335
>gi|442570460|pdb|3ZDK|A Chain A, Crystal Structure Of Human 5' Exonuclease Apollo
Length = 336
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 152/309 (49%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 7 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 65
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 66 SKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 124
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ + +
Sbjct: 125 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIKI 180
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 181 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHME 237
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + I+ +PYS+HS
Sbjct: 238 ICHSNMLRW-----NQTHPTIAILPTS--------------RKIHSSHPDIHVIPYSDHS 278
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 279 SYSELRAFV 287
>gi|351697379|gb|EHB00298.1| DNA cross-link repair 1B protein [Heterocephalus glaber]
Length = 533
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRARAARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIQVLEVGESHVLPLDEIGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +++L +++ P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIIQL----IRRHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ ++ + + R ++Q L+ + +H +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSHQRLELVQLLG---LADVFTVEEKAGRIHAVEHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + R + I+ +PYS+HS
Sbjct: 237 ICRSAMLHW-----NQTHPTIAVLPTS--------------RKIHRSHPDIHIIPYSDHS 277
Query: 418 SFTELREFV 426
S++EL FV
Sbjct: 278 SYSELCAFV 286
>gi|71043610|ref|NP_001020858.1| 5' exonuclease Apollo [Rattus norvegicus]
gi|68534320|gb|AAH98939.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) [Rattus
norvegicus]
Length = 309
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 150/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEIGESHVLLLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ +++L +++ P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEATQQIIQL----IRQFPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ ++ + + R ++Q L+ + +H +
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + +IY +PYS+HS
Sbjct: 237 ICHSAMLQW-----NQTHPTIAIFPTS--------------RKIRSPHPSIYSIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|410968088|ref|XP_003990545.1| PREDICTED: 5' exonuclease Apollo [Felis catus]
Length = 541
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 150/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA LV L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKKWIRALEVGESHVLPLDEIGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ ++ L ++K P+ + +
Sbjct: 124 TPSMLKEPALKLGKQIHTLYLDNTNCNPARVLPSRQEAARQIIEL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVD--- 233
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
E + + + NQ +A PT R + I+ +PYS+HS
Sbjct: 234 -HMEVCRSAML-HWNQTHPTIAILPTS--------------RKTHSSHPDIHIIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|190345216|gb|EDK37067.2| hypothetical protein PGUG_01165 [Meyerozyma guilliermondii ATCC
6260]
Length = 736
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 201/467 (43%), Gaps = 137/467 (29%)
Query: 95 PPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHY 154
P + K S+G+ T T + ++ P + +VDAF + + S YFLTHFH
Sbjct: 208 PKVIKHPTSHGERTRTPIPQLKIMDFPVVEN-STYKVSVDAFSFAPHESISQYFLTHFHA 266
Query: 155 DHYGGLGKRWSHGP-----------------IYCSPLTARLVRMCLLVNPSYIHPLELNT 197
DHYGG+ K+WS+ IY S +T+RL+ + ++P +I L+ +T
Sbjct: 267 DHYGGITKKWSYNRVFSSLEEYEDETKFRRIIYASEVTSRLLTLRFGIDPRFIKDLKFDT 326
Query: 198 EHVID-----------------------GVKVTLLEANHCPGAALIHFR--LQDGQCY-- 230
+ + G+ VT + ANHCPGAA+ F +D + Y
Sbjct: 327 RYCVKFYDDSGSPVDVQDGGYESNDSVPGLYVTPITANHCPGAAIFLFESISRDLKVYRI 386
Query: 231 LHTGDFRASRLMQSYPLLV-------NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
LH GDFR S ++ +PLL + ++ +YLDTTY +PKY FP +E V V +
Sbjct: 387 LHCGDFRVSNVILQHPLLTPFHAVGGSRALDKVYLDTTYMDPKYNFPKQELVCETVANMF 446
Query: 284 KNCL------------------------------KKQPKTLVVVGAYSIGKESVFLAISK 313
+ K+ K L++VG Y IGKE++ +AISK
Sbjct: 447 HRLVYAHASETKPLSNWLGILKQSRITDFMSSGKTKKKKFLILVGTYLIGKENLAIAISK 506
Query: 314 AL-GVKIYANASRRR-----VLQSFDWPELSGNLCTQ--GNDT---LLHVLPMSSLKFE- 361
L IY + R +++++D LS + + G++ ++H++PM+ + +
Sbjct: 507 KLRNCPIYVSCINSRSDKLDIIRTYDNEYLSKYVTNEDRGDEKCQCVVHLVPMNIVGSKG 566
Query: 362 TLKDYL--KPYGNQYAAVLAFRPTGWTY----SETVGNQ------------LDLIRPLSR 403
+ +Y Y + + + RPTGW++ +E V N +++ R +
Sbjct: 567 EISNYFTHNKYYDTFEQCVGLRPTGWSFQEKKTEGVNNDEVLEDYGDWETTINMPRAHAI 626
Query: 404 GNIT-------------------------IYGVPYSEHSSFTELREF 425
I IY +PYSEHSSF EL F
Sbjct: 627 NTIADIMLEQPPYAFTDVAPSKTNKAPYNIYSLPYSEHSSFRELSYF 673
>gi|6323786|ref|NP_013857.1| Pso2p [Saccharomyces cerevisiae S288c]
gi|267010|sp|P30620.1|PSO2_YEAST RecName: Full=DNA cross-link repair protein PSO2/SNM1
gi|4502|emb|CAA45405.1| SMN1(PSO2) [Saccharomyces cerevisiae]
gi|606435|emb|CAA87351.1| DNA cross-link repair protein [Saccharomyces cerevisiae]
gi|256270434|gb|EEU05629.1| Pso2p [Saccharomyces cerevisiae JAY291]
gi|259148714|emb|CAY81959.1| Pso2p [Saccharomyces cerevisiae EC1118]
gi|285814139|tpg|DAA10034.1| TPA: Pso2p [Saccharomyces cerevisiae S288c]
Length = 661
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 185/410 (45%), Gaps = 109/410 (26%)
Query: 121 PFYKKIP---GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH---GPI----Y 170
P +K I G VD F Y + + S YFL+HFH DHY GL K W++ PI Y
Sbjct: 215 PSFKIIKFNNGHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLY 274
Query: 171 CSPLTARLVRMCLLVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQC 229
CS +TA LV + + I L +N + D + V L+ANHCPGA ++ F+
Sbjct: 275 CSKITAILVNLKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANS 334
Query: 230 Y-------LHTGDFRASRLM-----QSYPLLVNHRVNVLYLDTTYCNPKYKFPSK----E 273
Y LHTGDFR++ M + N ++ +YLDTTY Y FPS+ E
Sbjct: 335 YDKPIRQILHTGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCE 394
Query: 274 DVLNYVVRLTKNCLKK-------------QPKTLV--------VVGAYSIGKESVFLAIS 312
V ++ +RL K+ K + KTL +VG Y+IGKE + + I
Sbjct: 395 TVADFTLRLIKHGKNKTFGDSQRNLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKIC 454
Query: 313 KALGVKIYANASRRR------VLQSFD-----WPE--LSGNLCTQGNDTLLHVLPMSSLK 359
+ L K++ + + VLQ+ + W E L+ NL +++ +H++P+ LK
Sbjct: 455 EFLKTKLFVMPNSVKFSMMLTVLQNNENQNDMWDESLLTSNL----HESSVHLVPIRVLK 510
Query: 360 F-ETLKDYLKP-------YGNQYAAVLAFRPTGWTYS----------------------- 388
ET++ YLK Y V+ F PTGW+++
Sbjct: 511 SQETIEAYLKSLKELETDYVKDIEDVVGFIPTGWSHNFGLKYQKKNDDDENEMSGNTEYC 570
Query: 389 -ETVGNQLD-----------LIRPLSRGN-ITIYGVPYSEHSSFTELREF 425
E + N D ++R + N ++ VPYSEHSSF +L +F
Sbjct: 571 LELMKNDRDNDDENGFEISSILRQYKKYNKFQVFNVPYSEHSSFNDLVKF 620
>gi|426216286|ref|XP_004002396.1| PREDICTED: 5' exonuclease Apollo [Ovis aries]
Length = 542
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 150/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDEVGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T NP PS+E+ +V L ++K P+ V +
Sbjct: 124 TPSMLKEPALRLGKQIHTLYLDNTNYNPDLVLPSQEEAARQIVDL----IRKHPQHNVKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLERL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + R + I+ +PYS+HS
Sbjct: 237 ICHSAMLRW-----NQTHPTIAILPTS--------------RKIYRSHPDIHVIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRVFV 286
>gi|151945839|gb|EDN64071.1| interstrand crosslink repair protein [Saccharomyces cerevisiae
YJM789]
Length = 661
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 185/410 (45%), Gaps = 109/410 (26%)
Query: 121 PFYKKIP---GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH---GPI----Y 170
P +K I G VD F Y + + S YFL+HFH DHY GL K W++ PI Y
Sbjct: 215 PSFKIIKFNNGHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLY 274
Query: 171 CSPLTARLVRMCLLVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQC 229
CS +TA LV + + I L +N + D + V L+ANHCPGA ++ F+
Sbjct: 275 CSKITAILVNLKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANS 334
Query: 230 Y-------LHTGDFRASRLM-----QSYPLLVNHRVNVLYLDTTYCNPKYKFPSK----E 273
Y LHTGDFR++ M + N ++ +YLDTTY Y FPS+ E
Sbjct: 335 YDKPIRQILHTGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCE 394
Query: 274 DVLNYVVRLTKNCLKK-------------QPKTLV--------VVGAYSIGKESVFLAIS 312
V ++ +RL K+ K + KTL +VG Y+IGKE + + I
Sbjct: 395 TVADFTLRLIKHGKNKTFGDSQRNLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKIC 454
Query: 313 KALGVKIYANASRRR------VLQSFD-----WPE--LSGNLCTQGNDTLLHVLPMSSLK 359
+ L K++ + + VLQ+ + W E L+ NL +++ +H++P+ LK
Sbjct: 455 EFLKTKLFVMPNSVKFSMMLTVLQNNENQNDMWDESLLTSNL----HESSVHLVPIRVLK 510
Query: 360 F-ETLKDYLKP-------YGNQYAAVLAFRPTGWTYS----------------------- 388
ET++ YLK Y V+ F PTGW+++
Sbjct: 511 SQETIEAYLKSLKELETDYVKDIEDVVGFIPTGWSHNFGLKYQKKNDDDENEMSGNTEYC 570
Query: 389 -ETVGNQLD-----------LIRPLSRGN-ITIYGVPYSEHSSFTELREF 425
E + N D ++R + N ++ VPYSEHSSF +L +F
Sbjct: 571 LELMKNDRDNDDENGFEISSILRQYKKYNKFQVFNVPYSEHSSFNDLVKF 620
>gi|349580422|dbj|GAA25582.1| K7_Pso2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297300|gb|EIW08400.1| Pso2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 661
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 185/410 (45%), Gaps = 109/410 (26%)
Query: 121 PFYKKIP---GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH---GPI----Y 170
P +K I G VD F Y + + S YFL+HFH DHY GL K W++ PI Y
Sbjct: 215 PSFKIIKFNNGHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLY 274
Query: 171 CSPLTARLVRMCLLVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQC 229
CS +TA LV + + I L +N + D + V L+ANHCPGA ++ F+
Sbjct: 275 CSKITAILVNLKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANS 334
Query: 230 Y-------LHTGDFRASRLM-----QSYPLLVNHRVNVLYLDTTYCNPKYKFPSK----E 273
Y LHTGDFR++ M + N ++ +YLDTTY Y FPS+ E
Sbjct: 335 YDKPIRQILHTGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCE 394
Query: 274 DVLNYVVRLTKNCLKK-------------QPKTLV--------VVGAYSIGKESVFLAIS 312
V ++ +RL K+ K + KTL +VG Y+IGKE + + I
Sbjct: 395 TVADFTLRLIKHGKNKTFGDSQRNLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKIC 454
Query: 313 KALGVKIYANASRRR------VLQSFD-----WPE--LSGNLCTQGNDTLLHVLPMSSLK 359
+ L K++ + + VLQ+ + W E L+ NL +++ +H++P+ LK
Sbjct: 455 EFLKTKLFVMPNSVKFSMMLTVLQNNENQNDMWDESLLTSNL----HESSVHLVPIRVLK 510
Query: 360 F-ETLKDYLKP-------YGNQYAAVLAFRPTGWTYS----------------------- 388
ET++ YLK Y V+ F PTGW+++
Sbjct: 511 SQETIEAYLKSLKELETDYVKDIEDVVGFIPTGWSHNFGLKYQKKNDDDENEMSGNTEYC 570
Query: 389 -ETVGNQLD-----------LIRPLSRGN-ITIYGVPYSEHSSFTELREF 425
E + N D ++R + N ++ VPYSEHSSF +L +F
Sbjct: 571 LELMKNDRDNDDENGFEISSILRQYKKYNKFQVFNVPYSEHSSFNDLVKF 620
>gi|365763857|gb|EHN05383.1| Pso2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 661
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 185/410 (45%), Gaps = 109/410 (26%)
Query: 121 PFYKKIP---GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH---GPI----Y 170
P +K I G VD F Y + + S YFL+HFH DHY GL K W++ PI Y
Sbjct: 215 PSFKIIKFNNGHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLY 274
Query: 171 CSPLTARLVRMCLLVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQC 229
CS +TA LV + + I L +N + D + V L+ANHCPGA ++ F+
Sbjct: 275 CSXITAILVNLKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANS 334
Query: 230 Y-------LHTGDFRASRLM-----QSYPLLVNHRVNVLYLDTTYCNPKYKFPSK----E 273
Y LHTGDFR++ M + N ++ +YLDTTY Y FPS+ E
Sbjct: 335 YDKPIRQILHTGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCE 394
Query: 274 DVLNYVVRLTKNCLKK-------------QPKTLV--------VVGAYSIGKESVFLAIS 312
V ++ +RL K+ K + KTL +VG Y+IGKE + + I
Sbjct: 395 TVADFTLRLIKHGKNKTFGDSQRNLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKIC 454
Query: 313 KALGVKIYANASRRR------VLQSFD-----WPE--LSGNLCTQGNDTLLHVLPMSSLK 359
+ L K++ + + VLQ+ + W E L+ NL +++ +H++P+ LK
Sbjct: 455 EFLKTKLFVMPNSVKFSMMLTVLQNNENQNDMWDESLLTSNL----HESSVHLVPIRVLK 510
Query: 360 F-ETLKDYLKP-------YGNQYAAVLAFRPTGWTYS----------------------- 388
ET++ YLK Y V+ F PTGW+++
Sbjct: 511 SQETIEAYLKSLKELETDYVKDIEDVVGFIPTGWSHNFGLKYQKKNDDDENEMSGNTEYC 570
Query: 389 -ETVGNQLD-----------LIRPLSRGN-ITIYGVPYSEHSSFTELREF 425
E + N D ++R + N ++ VPYSEHSSF +L +F
Sbjct: 571 LELMKNDRDNDDENGFEISSILRQYKKYNKFQVFNVPYSEHSSFNDLVKF 620
>gi|294655598|ref|XP_457765.2| DEHA2C01936p [Debaryomyces hansenii CBS767]
gi|199430455|emb|CAG85801.2| DEHA2C01936p [Debaryomyces hansenii CBS767]
Length = 712
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 186/446 (41%), Gaps = 151/446 (33%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH-----------------GPIYCSP 173
VDAF Y + + YFLTHFH DHYGG+ K+W + I+CS
Sbjct: 204 IAVDAFNYSPHELINKYFLTHFHSDHYGGITKKWCYERVFKDGDDFEDESKYKKIIFCST 263
Query: 174 LTARLVRMCLLVNPSYIHPLELNTEHVID---------------------GVKVTLLEAN 212
+TA+L+ + ++P +I PLE N ++I G+ VT + AN
Sbjct: 264 ITAKLLSLRFRIDPKFIMPLETNRRYLIQSFDTDVETEDGFIQTDDLMLPGLFVTPITAN 323
Query: 213 HCPGAALIHFR--LQDGQ--CYLHTGDFRASRLMQSYPLLVNHRV--------NVLYLDT 260
HCPG+ + F +GQ LH GDFR +R + +P L+ + + +YLDT
Sbjct: 324 HCPGSVIFLFESLSNNGQRLRVLHCGDFRVNREILDHPRLLTFNIANQGDLCLDKVYLDT 383
Query: 261 TYCNPKYKFPSKEDVLNYV------------------------------VRLTKNCLK-- 288
TY +P Y FP +E V N V R+T K
Sbjct: 384 TYMSPSYNFPKQELVCNTVSDMFYDLIYSQGETETTDSLFTTWFGVLKQSRITDFITKRD 443
Query: 289 ---KQPKTLVVVGAYSIGKESVFLAISKAL-GVKIYANASRRR-----VLQSFDWPELSG 339
K+ K LV++G Y IGKE + ++IS+ L IY + R +++SFD L+
Sbjct: 444 NQYKKKKFLVLIGTYVIGKERLAISISQRLNNCPIYVSTINSRNDKVDLVKSFDDNYLNQ 503
Query: 340 NLCTQ---GNDT--LLHVLPMSSL-KFETLKDYL--KPYGNQYAAVLAFRPTGWTYSETV 391
L T G+D+ ++H++PM + E L +Y Y ++ + RPTGW++S
Sbjct: 504 VLTTDDLGGSDSECMVHLVPMKIVSSLEELSNYFNHNRYFERFERCVGLRPTGWSFSNKY 563
Query: 392 G-----------------NQL-----DLIR------------------PLS--------- 402
N+L DL++ PLS
Sbjct: 564 ASTYKDEQDSNMQHSSDLNRLSSSCQDLVKIMKTEPTFSFIENILPQSPLSSLISKSKKV 623
Query: 403 ---RGNITIYGVPYSEHSSFTELREF 425
IY +PYSEHSSF EL F
Sbjct: 624 NHDESLYRIYTLPYSEHSSFRELSFF 649
>gi|401402020|ref|XP_003881150.1| hypothetical protein NCLIV_041920 [Neospora caninum Liverpool]
gi|325115562|emb|CBZ51117.1| hypothetical protein NCLIV_041920 [Neospora caninum Liverpool]
Length = 234
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 130/266 (48%), Gaps = 63/266 (23%)
Query: 102 ASNGKSTATHLKKIVDRSCPF-----YKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDH 156
AS + + H+ IV + P +KK+P +G +FL+HFH DH
Sbjct: 2 ASVPVAASRHVSHIVPETEPVILVDTFKKVP--------------RGSFVFFLSHFHADH 47
Query: 157 YGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPG 216
Y GL WS G +YCS +T ++ +C
Sbjct: 48 YSGLSSSWSRGTVYCSVVTGAVMFLC---------------------------------- 73
Query: 217 AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
+ + G+ YLHTGDFR R M +P L N ++ L+LDTTY P+Y+F + D +
Sbjct: 74 ------KTKGGKTYLHTGDFRYDRHMVDHPALANCHIDTLFLDTTYAKPEYEFQPQADTI 127
Query: 277 NYVVRLTKNCLKK--QP-KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFD 333
+ + + + K+ QP + L +VG+Y+IGKE + LA+S+A G K++A+ RRR+L
Sbjct: 128 QHAINVAEELCKQNGQPGRVLFLVGSYTIGKEKIALALSQAFGWKVFASGKRRRILDCLQ 187
Query: 334 WPEL-SGNLCTQGNDTLLHVLPMSSL 358
+L G L D+ +H++PM+++
Sbjct: 188 LEQLRDGRLSDDPADSCIHIVPMNTI 213
>gi|354487402|ref|XP_003505862.1| PREDICTED: 5' exonuclease Apollo-like [Cricetulus griseus]
gi|344252631|gb|EGW08735.1| DNA cross-link repair 1B protein [Cricetulus griseus]
Length = 527
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 150/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDETGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L++ +++ LYLD T CNP PS+++ +V+L +++ P+ + +
Sbjct: 124 TPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQL----IRQFPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ ++ + + R ++Q L+ + +H +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLG---LADVFTVEEKVGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + I+ +PYS+HS
Sbjct: 237 ICHSAMLQW-----NQTHPTIAILPTS--------------RKVRSPHPGIHTIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|356570279|ref|XP_003553317.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-link repair protein
SNM1-like [Glycine max]
Length = 324
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 99/194 (51%), Gaps = 41/194 (21%)
Query: 22 DENGFPSFQDNDDDDDDDEEEEEKEESFADDFYRCGTDWSCLLQTE----RKLKQANLFD 77
D+ GFP E ++ SFA DFY GT+WS LL E +K+KQ NLF
Sbjct: 41 DDKGFPX-------QLPGSETALEKSSFAADFYHSGTNWSSLLLPEDSNGKKMKQVNLFQ 93
Query: 78 MWGLKSN------SESEANCLF------SPPMKKLKASNGKSTATHL------------- 112
+WG K N S + + S K +K N S H
Sbjct: 94 IWGFKRNDVVGSVESSSGHSGYCEEGGGSSERKIVKPENCGSILHHTGKEFENTKSSRKR 153
Query: 113 -----KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG 167
K V RSCPFY K+PGT VDAF YG ++GCSAYFLTHFH DHY GL +WSHG
Sbjct: 154 KGSGGKNRVTRSCPFYXKMPGTTLIVDAFSYGCVEGCSAYFLTHFHCDHYNGLSMKWSHG 213
Query: 168 PIYCSPLTARLVRM 181
PIYC PLT +LV+M
Sbjct: 214 PIYCYPLTGQLVQM 227
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 86/149 (57%), Gaps = 19/149 (12%)
Query: 281 RLTKNC--LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELS 338
R+T++C K P T ++V A+S G G Y L F +
Sbjct: 161 RVTRSCPFYXKMPGTTLIVDAFSYGC---------VEGCSAY-------FLTHFHCDHYN 204
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI 398
G L + + ++ P++ + K YLK Y Q+ A+LAFRPTGWT+SE + N L+LI
Sbjct: 205 G-LSMKWSHGPIYCYPLTGQLVQMYKGYLKTYKGQFTAILAFRPTGWTFSERISNDLELI 263
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+P+S+ NITIYGVPYSEHSSFTELR+FVQ
Sbjct: 264 KPVSKRNITIYGVPYSEHSSFTELRDFVQ 292
>gi|363754123|ref|XP_003647277.1| hypothetical protein Ecym_6059 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890914|gb|AET40460.1| hypothetical protein Ecym_6059 [Eremothecium cymbalariae
DBVPG#7215]
Length = 585
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 175/377 (46%), Gaps = 77/377 (20%)
Query: 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL 184
K VD F + YFL+HFH DHY GL + W G ++CS +TA LV
Sbjct: 175 KFSEVTIVVDGFNFMDNSEVKYYFLSHFHADHYQGLCQSWKQGRLFCSQITANLVISKFK 234
Query: 185 VNPSYIHPLELNTE-HVIDGVKVTLLEANHCPGAALIHFRLQDG-----QCYLHTGDFRA 238
++ I L+LN ++ ++ L+ANHCPGA ++ F D LHTGDFRA
Sbjct: 235 IDVDQITILKLNEPLYITPRLRCFPLDANHCPGALILLFEELDFNGSVLHSVLHTGDFRA 294
Query: 239 SR-LMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVL----NYVVRLTKNCLK---- 288
+ +++S L R ++ +YLDTTY NP Y FP + VL ++ ++++ ++
Sbjct: 295 TNGMIRSLDQLTCGRELDSVYLDTTYLNPNYHFPLQRSVLKLTASFAAQISQTGIRTYFG 354
Query: 289 --------------------KQPKTLVVVGAYSIGKESVFLAISKALGVKIYA--NASRR 326
K+ + + ++ YSIGKE + ++I++ L KIY N+ +
Sbjct: 355 DTQKSILTFMKSTRDKIISQKRFRYIYLIATYSIGKEKLAISIAEELQTKIYIPLNSPKH 414
Query: 327 RVLQSF-DWPELSGNLCTQG-NDTLLHVLPMSSLKF-ETLKDYLKPYGNQYAAVLAFRPT 383
+++ + DW + N+ T ++ +H++ L E++ YL Y ++ F PT
Sbjct: 415 DLIKQYMDW--IPSNIITHNIQESCVHLVSFDVLSSKESIDKYLLTVPPIYEDIVGFNPT 472
Query: 384 GWTY--------SETVGNQ-----------LDLIRPLSRGNITI---------------Y 409
GW+Y SE + +DLIR S + I +
Sbjct: 473 GWSYDNGRKYMSSEATIKRFQSAESRYKYVIDLIRDCSVDELKIETFRSQYKPHKKYQVF 532
Query: 410 GVPYSEHSSFTELREFV 426
VPYSEHSSF +L F+
Sbjct: 533 KVPYSEHSSFKDLCVFL 549
>gi|255730817|ref|XP_002550333.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132290|gb|EER31848.1| predicted protein [Candida tropicalis MYA-3404]
Length = 687
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 177/431 (41%), Gaps = 137/431 (31%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH------------------GPIYCSPL 174
VDAF + YFLTHFH DHYGG+ K+W++ IYC+ +
Sbjct: 195 VDAFNFAPHSEIDQYFLTHFHADHYGGISKKWAYERVFGLEDMDYENDSKYRKIIYCTGI 254
Query: 175 TARLVRMCLLVNPSYIHPLELNTEHVID-------------------GVKVTLLEANHCP 215
T RL+ + ++P +I LEL+T + I G+ V + ANHCP
Sbjct: 255 TGRLLTLRFSIDPRFIKELELDTRYKIKSYTDDFIENFGVESNDEDPGLYVVPICANHCP 314
Query: 216 GAALIHFRL--QDGQCY--LHTGDFRASRLMQSYPLLVNH------------RVNVLYLD 259
GAA+ F D Q + +H GDFR ++ + P L +++ +YLD
Sbjct: 315 GAAIFLFESIGLDNQIHRIIHCGDFRVNKEILDNPTLRQFSLNKKNTIDGVLKIDQVYLD 374
Query: 260 TTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ----------------------------- 290
TTY +PK+ P +E V + V L + ++Q
Sbjct: 375 TTYMSPKHNLPKQELVCDVVADLFHDLAREQSNKSSLFANWFGALTQSRITDFWRAKAGP 434
Query: 291 -----PKTLVVVGAYSIGKESVFLAISKALGVKIY-ANASRRR----VLQSFDWPELSGN 340
K L+V+G Y IGKE + LAISK L IY +N RR + +++ P L
Sbjct: 435 TIIKKKKFLIVIGTYIIGKEKLALAISKRLKCMIYVSNIGARRDKYDIFKTYQDPYLESV 494
Query: 341 LCTQ--GNDT---LLHVLPMSSL-KFETLKDYL--KPYGNQYAAVLAFRPTGW------- 385
L GND ++H++PM+ + E L +Y Y + + PTGW
Sbjct: 495 LSDNEFGNDNDDFVIHLVPMTIVGTVEELSNYFNHNRYYENFERCIGLCPTGWSFNQYKR 554
Query: 386 -------------------------TYSETVGNQLDLIRPLSRGNITI-----YGVPYSE 415
+Y + + Q+ +++G I Y +PYSE
Sbjct: 555 PKRFGSPPRNELEEIIQIMENQTSFSYVDDILAQVPKTTKVTKGKPDIGLYRSYAIPYSE 614
Query: 416 HSSFTELREFV 426
HSSF EL FV
Sbjct: 615 HSSFRELAYFV 625
>gi|405973753|gb|EKC38445.1| DNA cross-link repair 1B protein [Crassostrea gigas]
Length = 609
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 30/313 (9%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K IPGTP VD ++ +FLTH H DH GL W H IYCS +T +L+
Sbjct: 4 KVIPGTPIAVDFWKTRECPNARLFFLTHLHGDHIVGLSSSWQHK-IYCSEVTGKLLVERY 62
Query: 184 LVNPSYIHPLELNTEHV-------IDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
++ S I PLE H+ I+ + VT++ A+HCPG+ + F + L+TGDF
Sbjct: 63 DIDASLISPLETGCSHILYVDSDQIEQMSVTVINAHHCPGSVMFLFEGYFSK-ILYTGDF 121
Query: 237 RASRLMQSYPLLVN-HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
R M+ PL+ N + LYLD TY +PK FPS+E+ ++ + ++ +
Sbjct: 122 RFDSEMKDDPLMRNILHADTLYLDNTYNSPKCVFPSREESFKQMMEI----IQSHEDFHI 177
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
+G ++GKE + + I+ L I S ++ + D P++ T D + V+P
Sbjct: 178 KIGLRNLGKEDLLVKIAVDLNEWIKVPPSFFQLAELLDLPDV---FITGETDARIEVVPF 234
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
S+ + ++ + N+ +A PT ++ L++ ++ N +Y VPYS+
Sbjct: 235 YSISNKNIERW-----NKECPTIALLPT------SLYTGLEMSPFCNQEN--VYIVPYSD 281
Query: 416 HSSFTELREFVQV 428
HSSF EL EFV++
Sbjct: 282 HSSFDELIEFVKL 294
>gi|302780583|ref|XP_002972066.1| hypothetical protein SELMODRAFT_96540 [Selaginella moellendorffii]
gi|300160365|gb|EFJ26983.1| hypothetical protein SELMODRAFT_96540 [Selaginella moellendorffii]
Length = 204
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 100/162 (61%), Gaps = 3/162 (1%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV 179
PF+K+IPGT F VD F S AYFLTHFH DHY GL W G I+CS +T RLV
Sbjct: 36 PFHKRIPGTRFVVDGFGAQCAGDWSRAYFLTHFHGDHYAGLAPSWDKGMIFCSQVTGRLV 95
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL-QDGQCYLHTGDFRA 238
L V ++ L +N+ ID +VTL++ANHCPGA + + G ++HTGD R
Sbjct: 96 VEALGVRRDFVVELAMNSVIWIDECQVTLVDANHCPGAVQFLVEVPEHGTRFVHTGDMRF 155
Query: 239 SRLMQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYV 279
+ +M+ L N + ++LDTTYCNPK+ FP++E+ ++Y+
Sbjct: 156 TPVMKEDASLCNFVGADAVFLDTTYCNPKFVFPAQEESISYI 197
>gi|311254550|ref|XP_003125885.1| PREDICTED: 5' exonuclease Apollo-like [Sus scrofa]
Length = 537
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 150/310 (48%), Gaps = 38/310 (12%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGCARLFFLSHMHSDHTVGLSSTWCR-PVYCSPITAYLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ H++ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEVGESHILPLDEVGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRF 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + ++ LYLD T CNP PS+++ +V L ++K P+ + +
Sbjct: 124 TPSMLKEPALQLGKPIHTLYLDNTNCNPALVLPSQQEAARQIVEL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLP-MS 356
G YS+GKES+ + AL + + S RR L+ L+ + +H + M
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHME 236
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEH 416
+ L+ NQ +A PT R + R + I+ +PYS+H
Sbjct: 237 ICRSAVLR------WNQTHPTIAILPTS--------------RRIYRSHPDIHIIPYSDH 276
Query: 417 SSFTELREFV 426
SSF+ELR FV
Sbjct: 277 SSFSELRAFV 286
>gi|297664011|ref|XP_002810450.1| PREDICTED: 5' exonuclease Apollo [Pongo abelii]
Length = 532
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 151/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTLL+ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ + +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 180 GLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHME 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ + + NQ +A PT R + + I+ +PYS+HS
Sbjct: 237 ICHSNMLRW-----NQTHPTIAILPTS--------------RKIHSSHPDIHVIPYSDHS 277
Query: 418 SFTELREFV 426
S++EL FV
Sbjct: 278 SYSELCAFV 286
>gi|323303509|gb|EGA57302.1| Pso2p [Saccharomyces cerevisiae FostersB]
Length = 661
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 184/410 (44%), Gaps = 109/410 (26%)
Query: 121 PFYKKIP---GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH---GPI----Y 170
P +K I G VD F Y + + S YFL+HFH DHY GL K W++ PI Y
Sbjct: 215 PSFKIIKFNNGHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLY 274
Query: 171 CSPLTARLVRMCLLVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQC 229
CS +TA LV + + I L +N + D + V L+ANHCPGA ++ F
Sbjct: 275 CSXITAILVNLKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFXEFLANS 334
Query: 230 Y-------LHTGDFRASRLM-----QSYPLLVNHRVNVLYLDTTYCNPKYKFPSK----E 273
Y LHTGDFR++ M + N ++ +YLDTTY Y FPS+ E
Sbjct: 335 YDKPIRQILHTGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCE 394
Query: 274 DVLNYVVRLTKNCLKK-------------QPKTLV--------VVGAYSIGKESVFLAIS 312
V ++ +RL K+ K + KTL +VG Y+IGKE + + I
Sbjct: 395 TVADFTLRLIKHGKNKTFGDSQRBLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKIC 454
Query: 313 KALGVKIYANASRRR------VLQSFD-----WPE--LSGNLCTQGNDTLLHVLPMSSLK 359
+ L K++ + + VLQ+ + W E L+ NL +++ +H++P+ LK
Sbjct: 455 EFLKTKLFVMPNSVKFSMMLTVLQNNENQNDMWDESLLTSNL----HESSVHLVPIRVLK 510
Query: 360 F-ETLKDYLKP-------YGNQYAAVLAFRPTGWTYS----------------------- 388
ET++ YLK Y V+ F PTGW+++
Sbjct: 511 SQETIEAYLKSLKELETDYVKDIEDVVGFIPTGWSHNFGLKYQKKNDDDENEMSGNTEYC 570
Query: 389 -ETVGNQLD-----------LIRPLSRGN-ITIYGVPYSEHSSFTELREF 425
E + N D ++R + N ++ VPYSEHSSF +L +F
Sbjct: 571 LELMKNDRDXDDENGFEISSILRQYKKYNKFQVFNVPYSEHSSFNDLVKF 620
>gi|260947898|ref|XP_002618246.1| hypothetical protein CLUG_01705 [Clavispora lusitaniae ATCC 42720]
gi|238848118|gb|EEQ37582.1| hypothetical protein CLUG_01705 [Clavispora lusitaniae ATCC 42720]
Length = 623
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 174/434 (40%), Gaps = 135/434 (31%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW------SHGPIYCSPLTARLVRM 181
G VDAF Y YFL+HFH DHYGG KRW +YCS +TARL+++
Sbjct: 129 GHDVAVDAFCYQPHNTILQYFLSHFHSDHYGGFTKRWCRERTLDKKIVYCSEITARLLQI 188
Query: 182 CLLVNPSYIHPLELN-----------------------------------------TEHV 200
V +I PL+LN +E
Sbjct: 189 RFNVEEQFIFPLKLNARCKVWDYGHAVNVCSGDKTYDNNGSRSAFEEGYMLNGGFYSEEK 248
Query: 201 IDGVKVTLLEANHCPGAALIHFRL----QDGQCYLHTGDFRASRLMQSYPLLVNHRV--- 253
G+ VT ++ANHCPGA + F + LH GDFR R M +P+++ +
Sbjct: 249 TPGLYVTSIDANHCPGAVIFLFESISLSMESSFSLHCGDFRVCRAMLEHPMILPFHIGGS 308
Query: 254 NVL---YLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP------------------- 291
+VL YLDTTY +P++ FP +E V + L + +K P
Sbjct: 309 SVLDKAYLDTTYMSPEHNFPLQETVCDAAATLVEKFAEKGPLYNEYFGTTLQSRITDFLQ 368
Query: 292 -------KTLVVVGAYSIGKESVFLAISKALG------VKIYANASRRRVLQSFDWPELS 338
K L++VG Y IGKE + ++ISK + I + ++ ++ SF L
Sbjct: 369 LPRMKKKKFLILVGTYLIGKEKLAISISKRMDSCPIYVSNINSRGDKKEIIASFQNDFLD 428
Query: 339 GNLCT------QGNDTLLHVLPMSSLKF-ETLKDYL--KPYGNQYAAVLAFRPTGWTYS- 388
L + ++H++PM + + + Y Y N + + FRPTGW +
Sbjct: 429 SVLTDDDVGKYSSAEVMIHLVPMKIVGSPKEISSYFNHNQYFNHFERCIGFRPTGWAFEG 488
Query: 389 -----------------------ETVGNQ-----LDLI---RP-----LSRGNITIYGVP 412
E + N+ LD++ RP + + IY +P
Sbjct: 489 TSDFLELEDEKPYAEDASFQDMIEALKNRPNYTYLDILKQKRPQSDKLMDKPTFKIYSLP 548
Query: 413 YSEHSSFTELREFV 426
YSEHSSF EL F
Sbjct: 549 YSEHSSFRELSFFA 562
>gi|443694810|gb|ELT95851.1| hypothetical protein CAPTEDRAFT_225584 [Capitella teleta]
Length = 465
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 154/313 (49%), Gaps = 36/313 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD ++ + +FL+H H DH GL W H I+CSPLT RL+
Sbjct: 20 IPQTPIAVDHWKMTPMSPARVFFLSHMHEDHMKGLTPTWRHK-IHCSPLTKRLLIDKFQF 78
Query: 186 NPSYIHPLELNTEHVID---------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+PS + LE +H++ + V++++A HCPG+ + F+ G+ + +TGDF
Sbjct: 79 DPSQVVELEPGEDHLVSVTDSETSSFRMTVSVIDAAHCPGSVMFIFQGYFGKIF-YTGDF 137
Query: 237 R-ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
R +S +M + P V+VLYLD T+C+P FP++ +++ + + +
Sbjct: 138 RFSSEIMDNLPANYTTDVDVLYLDNTFCSPNCVFPTRAAATEEIIKAIE---QSSDAAKI 194
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM 355
++G ++GKE++ + I+K I R ++ + P N G+++ + +PM
Sbjct: 195 LIGVRNLGKETLLMEIAKRFQCWIQVTERRLEMINLLNLP----NYFQTGSESRIEAVPM 250
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
+K +K++ + A+ P +T + NI++ VPYS+
Sbjct: 251 DQIKSSYMKNHPEMMAILPTALYIEHPHAFTACK---------------NISL--VPYSD 293
Query: 416 HSSFTELREFVQV 428
HSS+ EL EFV +
Sbjct: 294 HSSYAELHEFVAM 306
>gi|149411559|ref|XP_001506464.1| PREDICTED: 5' exonuclease Apollo-like [Ornithorhynchus anatinus]
Length = 563
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSPLT RL+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGPARLFFLSHMHSDHTVGLSSTWTR-PLYCSPLTGRLLHHSLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 AERWIRTLEVGESHVLPLDEMGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLLVN-HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P+L + +++ LYLD T CNP + PS+E+ + L +++ P+ V +
Sbjct: 124 APAMLREPVLSHGKQIHTLYLDNTNCNPAHPLPSREEATRQIAAL----IRRHPQHDVKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKE++ ++ G + + R +++ D L+ + +H + +
Sbjct: 180 GLYSLGKETLLEELALEFGTWVVLSPQRLELVRLLD---LADVFTVEEGAGRIHAVNHAE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ T+ + N +A PT R + + I+ VPYS+HS
Sbjct: 237 ICRATMLRW-----NSDRPTIAILPTS--------------RWVQTAHPDIHVVPYSDHS 277
Query: 418 SFTELREFV 426
SF+EL +FV
Sbjct: 278 SFSELWDFV 286
>gi|302784836|ref|XP_002974190.1| hypothetical protein SELMODRAFT_100130 [Selaginella moellendorffii]
gi|300158522|gb|EFJ25145.1| hypothetical protein SELMODRAFT_100130 [Selaginella moellendorffii]
Length = 415
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 153/342 (44%), Gaps = 70/342 (20%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV----- 185
F VD +R S AYFLTH H DH GL W GP+YCS +TA M LL
Sbjct: 5 FVVDEWRSPS----DAYFLTHLHADHTEGLSADWCRGPLYCSQVTA----MLLLARFKGF 56
Query: 186 NPSYIHPLELNTEHVIDG-------VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR- 237
NP+ +H L+L T ++ ++VT ++A+HCPGA + F + G C LHTGDFR
Sbjct: 57 NPALLHILDLGTPTLVSSNNAADSLLEVTAIDADHCPGAVMYVFHGEFG-CVLHTGDFRW 115
Query: 238 -------ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
R + +V+ LYLD T+CNP + FPS+ V+ L ++
Sbjct: 116 NNDRCTLEERKEALREAIGGAQVDFLYLDNTFCNPLFCFPSRNAAATRVIEL----IRGH 171
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
P+ +V+G ++GKE + L+I++AL KI R + + P++ T + T +
Sbjct: 172 PEKDIVIGIDNLGKEELLLSIAQALETKICVWPQRLKTMHLLQLPDV---FTTDTSITRI 228
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGW------------------------T 386
+P S+ +LK N+ L PTG +
Sbjct: 229 RAVPRCSVSTRSLK-----LLNEIRPTLGILPTGCLCLCNPSSGRKPKPKLLCSESCYKS 283
Query: 387 YSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
T NQ + I VPYS H F+E R+FV +
Sbjct: 284 RERTSDNQ-----AADASSRLINVVPYSLHCCFSEARDFVDL 320
>gi|291398227|ref|XP_002715463.1| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae)
[Oryctolagus cuniculus]
Length = 538
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 152/315 (48%), Gaps = 48/315 (15%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRQRQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR- 237
+ +I LE+ HV+ + + VTLL+A+HCPG+ + F G L+TGDFR
Sbjct: 65 SKKWIRALEVGESHVLPLDEIGQETMTVTLLDAHHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+++ PL +++ LYLD T CNP P++++ + +V+L +++ P+ + +
Sbjct: 124 TPSMLREPPLSSGKQIHTLYLDNTNCNPALVLPTRQEAAHQIVQL----IREHPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQ------SFDWPELSGNLCTQGNDTLLH 351
G YS+GKES+ ++ + + R V+Q F E +G + N + H
Sbjct: 180 GLYSLGKESLLEHLALECQTWVVLSPQRLEVVQLLGLADVFTVEEKAGRIHAVDNMEICH 239
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV 411
+ L++ NQ +A PT R + + I+ +
Sbjct: 240 ---SAMLRW-----------NQTHPTIAILPTS--------------RKIHTSHPDIHII 271
Query: 412 PYSEHSSFTELREFV 426
PYS+HSS++ELR FV
Sbjct: 272 PYSDHSSYSELRTFV 286
>gi|344228830|gb|EGV60716.1| hypothetical protein CANTEDRAFT_110531 [Candida tenuis ATCC 10573]
Length = 555
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 180/428 (42%), Gaps = 133/428 (31%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-----------------IYCSPL 174
++DAF Y YFL+HFH DHYGG+ K+W + IYCS
Sbjct: 55 SMDAFNYSPDPEMEIYFLSHFHADHYGGISKKWCYERVFESVDDFKDESMYRPLIYCSKT 114
Query: 175 TARLVRMCLLVNPSYIHPLELN------------------TEHVIDGVKVTLLEANHCPG 216
T L+ + ++P +I LE + +E I+G+ VT++EANHCPG
Sbjct: 115 TGNLLTLKFGIDPRFIESLEFDVLYRVMRFDSMSPAFEKVSEMDIEGIYVTMMEANHCPG 174
Query: 217 AALIHFR----LQDGQCYLHTGDFRASRLMQSYPLL----VNHRVNVL---YLDTTYCNP 265
+ + F + + YLH GDFR ++ M + L + + +VL YLDTTY +
Sbjct: 175 SGIFLFESKSTMASSKKYLHCGDFRVNKQMIQHKSLERFTLPNSTDVLDKVYLDTTYLSF 234
Query: 266 KYKFPSKEDVLNYVVRLTKN-CLKKQP---------------------------KTLVVV 297
+ +FP ++ V + +L + C +P K L++V
Sbjct: 235 QRRFPKQDLVCSEAAQLFHDLCQGNKPGLMTECFGLGRQSRITEFGSKSSKPKKKFLILV 294
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRR----------VLQSFDWPELSGNLCTQGND 347
G Y IGKE + +AISK + IY + ++ R ++ F + +L +D
Sbjct: 295 GKYIIGKERLAIAISKKINCPIYVSNAKSRGNHAEVVDACEIEYFKDHIIKNDLGDDSSD 354
Query: 348 TLLHVLPMSSLK-FETLKDYLK--PYGNQYAAVLAFRPTGWT--YSETVG---NQLDLIR 399
++H++ M ++ E + +Y K Y + +A RPTGW+ Y E+ G Q +
Sbjct: 355 CIIHLVSMEVVEALENVSNYFKHNKYHEHFERCIALRPTGWSHAYDESTGFRFEQFESTD 414
Query: 400 PLS-----------------------------------------RGNITIYGVPYSEHSS 418
P++ R ++ IY PYSEHSS
Sbjct: 415 PINTSAENLNNGLSQICETCFNDTPFSYQIPIDAKKAFNKGQSKRNDLRIYSFPYSEHSS 474
Query: 419 FTELREFV 426
+ EL FV
Sbjct: 475 YRELTYFV 482
>gi|255563435|ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223538070|gb|EEF39682.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 427
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 161/340 (47%), Gaps = 55/340 (16%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL-LVNPSYI 190
+VD ++ GS YFLTH H DH GL W+ GP++CS LTA L N S +
Sbjct: 7 SVDQWKEGS----QVYFLTHLHSDHTKGLTSAWARGPLFCSRLTANLFPARFPEFNLSLL 62
Query: 191 HPLELNTEHVIDGV----------KVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR--- 237
L++ H + V +V ++A+HCPGA ++ FR D C L+TGDFR
Sbjct: 63 CVLDIGVWHSLSVVSPSSGSQTVLQVMPIDAHHCPGAVMLLFR-GDFGCLLYTGDFRWEA 121
Query: 238 -ASRLMQSYPLLVN----HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
+ R +L+N V++LYLD TYCNP + FP + VV + + P
Sbjct: 122 TSERGKIGSNMLLNALKDDSVDILYLDNTYCNPSFDFPPRHVAARQVV----DIIASHPG 177
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
+++G S+GKE + L IS+ L +KI+ R + + + ++ T+ + T +
Sbjct: 178 HDIIIGIDSLGKEDLLLHISRMLNIKIWVWPERLQTMHLLGFHDI---FTTKTSQTRVRA 234
Query: 353 LPMSSLKFETLKDYLK--------PYG------------NQYAAVLAFRPTGWTYSETVG 392
+P S TL++ K P G N + + L R S G
Sbjct: 235 VPRYSFSINTLEELNKMHPTIGIMPSGLPWVVKPTKGDDNLFGSFLTSRYKNGKLSANGG 294
Query: 393 NQLDL----IRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
D ++ + R + IY VPYS+HS F+E++EF+++
Sbjct: 295 TGTDKLNGSVQSVERLHQYIYSVPYSDHSCFSEIQEFIEL 334
>gi|196000276|ref|XP_002110006.1| hypothetical protein TRIADDRAFT_21698 [Trichoplax adhaerens]
gi|190588130|gb|EDV28172.1| hypothetical protein TRIADDRAFT_21698, partial [Trichoplax
adhaerens]
Length = 306
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 146/311 (46%), Gaps = 30/311 (9%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP +D +R +FL+H+H DH GL WS IYCS +TA L+ + +
Sbjct: 8 IPDTPIAIDYWRERQCNQSKLFFLSHYHADHMEGLNSSWSLK-IYCSEITASLLIHEMSI 66
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ L+ HVI + + VTLL+ANHCPGA + F G C L+TGDFR
Sbjct: 67 RSDLVVSLQTGQPHVIPVDEMGCETMSVTLLDANHCPGAVMFLFEGYFG-CILYTGDFRY 125
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ P + +V+ L+LD TYCNPK +FP++ D ++ N +++ P + V++
Sbjct: 126 DDQLHLQPGFPQSKQVDQLFLDNTYCNPKAQFPTRHDAFQIIL----NIIQQNPTSNVII 181
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G +GKE + ++ L I ++ R + L + + G + +
Sbjct: 182 GLTHLGKEKLLEQLAVKLQTMIVVDSKRMQRLNLLGCLNVFTDQMDMGRIIVKY------ 235
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
K E ++ + Q +A PT + LD IY V YS+HS
Sbjct: 236 -KNEITDSTIERWNQQSGPTIAIIPTALYIYQDRPPILDK---------RIYVVHYSDHS 285
Query: 418 SFTELREFVQV 428
++ ELR+FV V
Sbjct: 286 NYNELRQFVSV 296
>gi|357125358|ref|XP_003564361.1| PREDICTED: 5' exonuclease Apollo-like [Brachypodium distachyon]
Length = 436
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 155/346 (44%), Gaps = 63/346 (18%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLG--KRWSHGPIYCSPLTARLVRMCLL-VNPS 188
+VD F GS AYFLTH H DH GL + W HGP+YCSP+TARL+ ++ S
Sbjct: 7 SVDKFSGGS----QAYFLTHLHQDHTRGLDAVRGWRHGPLYCSPITARLLPTRFPGIDVS 62
Query: 189 YIHPL------ELNTEHVIDGVKVTLL----EANHCPGAALIHFRLQDGQCYLHTGDFR- 237
+ P+ L+ I G ++LL A HCPG+ + FR D C L+TGDFR
Sbjct: 63 LLRPIAPGASASLSLTSPISGRPISLLVTAIPALHCPGSLMYLFR-GDLGCRLYTGDFRW 121
Query: 238 -----ASRLMQSYPL--LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
+R + L L V+VLYLD TYC P FP + V +V N ++
Sbjct: 122 ELGCEEARSAKKALLHALAGDSVDVLYLDNTYCYPSLNFPPRRVVAEQIV----NIIQAH 177
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
P V++G ++GKE + L +S+AL +KI+ R + + TQ + T +
Sbjct: 178 PDHEVIIGVDTLGKEDLLLHLSRALQMKIWVWPQRLLTMHLLGIDDNQEIFTTQTSLTRI 237
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTG----WTYSE----------------- 389
+P SL E+L+ N + P+G W SE
Sbjct: 238 RAVPRYSLTIESLEAL-----NTVCPTIGIMPSGIPWLWKNSEGKAKSSGKSPTKSFRCK 292
Query: 390 -------TVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
T+ D + P Y +PYSEH+ F+EL F+Q
Sbjct: 293 AQERDVGTIEMDYDPLSPPKLFENDSYALPYSEHACFSELEAFMQA 338
>gi|406702005|gb|EKD05076.1| hypothetical protein A1Q2_00620 [Trichosporon asahii var. asahii
CBS 8904]
Length = 988
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 97/188 (51%), Gaps = 21/188 (11%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
R PFYK + G P VDAF YG++ +AYFLTH H DHY L K W HGPIYCS TA
Sbjct: 253 RKAPFYKVLTGMPIAVDAFCYGAVPKVTAYFLTHAHADHYTALSKAWRHGPIYCSETTAN 312
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR----LQDGQC---- 229
L+ + L V ++ P + GV VT L+ANHCPG+ + F + G
Sbjct: 313 LIVLKLGVERHWVVPFVIPN---TGGVTVTSLDANHCPGSNVFLFEGRQTVDAGDTTFKS 369
Query: 230 ----------YLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYV 279
YLH GDFRAS +P + ++ +YLDTTY NP Y FP + V+
Sbjct: 370 PMVGSNRIFRYLHCGDFRASPKHVLHPAVACKPLDTIYLDTTYLNPSYCFPPQPLVIEAC 429
Query: 280 VRLTKNCL 287
L K +
Sbjct: 430 AALAKKVV 437
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 20/155 (12%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
+TL+++G YSIGKE + I+KA+G KIY N + ++L+ D PEL + T + +H
Sbjct: 608 RTLILIGTYSIGKERIVKGIAKAIGAKIYCNPRKTQILKCEDDPELHDLMGTDPIECQIH 667
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS-ETVGNQLD-----LIRPLSRG- 404
++P+S++ + L++YL + +LAFRPTGWT+S + N L + R +RG
Sbjct: 668 LVPLSNITLDNLEEYLATMHPHFNRILAFRPTGWTFSGPSAANSLPDVNFIIKRDQARGF 727
Query: 405 -------------NITIYGVPYSEHSSFTELREFV 426
++GVPYSEHSSF EL F
Sbjct: 728 SDVSLKPIRGSCRKYMMFGVPYSEHSSFFELTCFA 762
>gi|146423725|ref|XP_001487788.1| hypothetical protein PGUG_01165 [Meyerozyma guilliermondii ATCC
6260]
Length = 736
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 200/467 (42%), Gaps = 137/467 (29%)
Query: 95 PPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHY 154
P + K S+G+ T T + ++ P + VDAF + + S YFLTHFH
Sbjct: 208 PKVIKHPTSHGERTRTPIPQLKIMDFPVVEN-STYKVLVDAFSFAPHESISQYFLTHFHA 266
Query: 155 DHYGGLGKRWSHGP-----------------IYCSPLTARLVRMCLLVNPSYIHPLELNT 197
DHYGG+ K+WS+ IY S +T+RL+ + ++P +I L+ +T
Sbjct: 267 DHYGGITKKWSYNRVFSSLEEYEDETKFRRIIYASEVTSRLLTLRFGIDPRFIKDLKFDT 326
Query: 198 EHVID-----------------------GVKVTLLEANHCPGAALIHFR--LQDGQCY-- 230
+ + G+ VT + ANHCPGAA+ F +D + Y
Sbjct: 327 RYCVKFYDDSGSPVDVQDGGYESNDSVPGLYVTPITANHCPGAAIFLFESISRDLKVYRI 386
Query: 231 LHTGDFRASRLMQSYPLLV-------NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
LH GDFR S ++ +PLL + ++ +YLDTTY +PKY FP +E V V +
Sbjct: 387 LHCGDFRVSNVILQHPLLTPFHAVGGSRALDKVYLDTTYMDPKYNFPKQELVCETVANMF 446
Query: 284 KNCL------------------------------KKQPKTLVVVGAYSIGKESVFLAISK 313
+ K+ K L++VG Y IGKE++ +AI K
Sbjct: 447 HRLVYAHASETKPLSNWLGILKQSRITDFMSSGKTKKKKFLILVGTYLIGKENLAIAILK 506
Query: 314 ALG------VKIYANASRRRVLQSFDWPELSGNLCTQ--GNDT---LLHVLPMSSLKFE- 361
L + I + + + +++++D LS + + G++ ++H++PM+ + +
Sbjct: 507 KLRNCPIYVLCINSRSDKLDIIRTYDNEYLSKYVTNEDRGDEKCQCVVHLVPMNIVGSKG 566
Query: 362 TLKDYL--KPYGNQYAAVLAFRPTGWTY----SETVGNQ------------LDLIRPLSR 403
+ +Y Y + + + RPTGW++ +E V N +++ R +
Sbjct: 567 EISNYFTHNKYYDTFEQCVGLRPTGWSFQEKKTEGVNNDEVLEDYGDWETTINMPRAHAI 626
Query: 404 GNIT-------------------------IYGVPYSEHSSFTELREF 425
I IY +PYSEHSSF EL F
Sbjct: 627 NTIADIMLEQPPYAFTDVAPSKTNKAPYNIYSLPYSEHSSFRELSYF 673
>gi|431896514|gb|ELK05926.1| DNA cross-link repair 1B protein [Pteropus alecto]
Length = 488
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 149/310 (48%), Gaps = 36/310 (11%)
Query: 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL 184
+IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L
Sbjct: 5 QIPHTPIAVDFWSLRRAASARLFFLTHMHSDHTVGLSSTWAR-PLYCSPITAFLLHRQLQ 63
Query: 185 VNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
V+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 64 VSKKWIRALEVGESHVLPLDETGQETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 238 ASRLMQSYPLLV-NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
+ M P L +++ LYLD T NP+ PS+E+ +V L ++K P+ V
Sbjct: 123 YTPSMLKEPALRGGKQIHTLYLDNTNYNPELVLPSQEEAARQIVEL----IRKHPQHNVK 178
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMS 356
+G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 179 IGLYSLGKESLLEQL--ALEFRTWVVLSPRR-LELVQLLGLADVFTVEEQAGRIHAVDRV 235
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEH 416
+ + + NQ +A PT R + + I+ VPYS+H
Sbjct: 236 EICHSAMLRW-----NQTHPTIAILPTS--------------RKIHSSHPDIHVVPYSDH 276
Query: 417 SSFTELREFV 426
SS++EL FV
Sbjct: 277 SSYSELCAFV 286
>gi|20804871|dbj|BAB92553.1| DNA cross-link repair 1B-like protein [Oryza sativa Japonica Group]
gi|125572255|gb|EAZ13770.1| hypothetical protein OsJ_03695 [Oryza sativa Japonica Group]
Length = 416
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 157/348 (45%), Gaps = 66/348 (18%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR--WSHGPIYCSPLTARLVRMCLL-VNP 187
+VD F GS AYFLTH H DH GLG W HGP+YCSP+TARL+ V+
Sbjct: 6 VSVDKFSGGS----QAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPVTARLLPTRFPGVDA 61
Query: 188 SYIHPLELNTEHVID----------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
S + PL + V VT + A HCPG+ + FR D C L+TGDFR
Sbjct: 62 SLLRPLAPGASASLSLSSPSTGRAVSVVVTAIPALHCPGSLMYLFR-GDLGCMLYTGDFR 120
Query: 238 ------ASRLMQSYPL--LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK 289
+R + L L V+VLYLD TYC+P FP + V +V N ++
Sbjct: 121 WELRCKRARAAKKALLDALAGDTVDVLYLDNTYCHPSLSFPPRPIVAEQIV----NIIRA 176
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGN---LCTQGN 346
P +++G ++GKE + L IS+AL K+ +R LQ+ + N TQ +
Sbjct: 177 HPDHEIIIGVDTLGKEDLLLHISRALQTKVIWVWPQR--LQTIHLLGIDDNQEIFTTQTS 234
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTG--WTYSETVGNQLDLIRP---- 400
T + +P SL E+L D L N + P+G W + + G ++
Sbjct: 235 LTRIRAVPRYSLTIESL-DAL----NTVCPTIGIMPSGIPWLWKNSKGKAKSGVKSPAKS 289
Query: 401 -----LSRGNITI---------------YGVPYSEHSSFTELREFVQV 428
L G I + Y +PYSEH+ F EL F+ +
Sbjct: 290 IRCKGLDEGAIEMDYDPLSPPKLFEKDSYSLPYSEHACFAELENFMLI 337
>gi|224029987|gb|ACN34069.1| unknown [Zea mays]
gi|413952236|gb|AFW84885.1| hypothetical protein ZEAMMB73_126664 [Zea mays]
Length = 438
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 152/341 (44%), Gaps = 53/341 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK--RWSHGPIYCSPLTARLVRMCLL-VNP 187
+VD F GS AYFLTH H DH GLG W HGP+YCSP TARL+ + ++
Sbjct: 6 VSVDKFSGGS----QAYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLLPIRFPGIDA 61
Query: 188 SYIHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
S + PL I + VT + A HCPG+ + FR D C L+TGDFR
Sbjct: 62 SLLRPLAPGASASIYLFSPSSGQSLSLHVTAIPALHCPGSLMYLFR-GDLGCMLYTGDFR 120
Query: 238 -------ASRLMQSY-PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK 289
A R Q L ++VLYLD TYC+P FP + V V+ + ++
Sbjct: 121 WELGCDEARRAKQDLLDALDGDTIDVLYLDNTYCHPSLNFPPRPVVAEQVI----DIIRS 176
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
P V++G ++GKE + L IS+AL KI+ R + + E TQ + T
Sbjct: 177 HPDHEVIIGVDTLGKEDLLLHISRALQTKIWVWPQRLQTIHLLGIDENRDIFTTQTSLTR 236
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG-----NQLDLIRPLSRG 404
+ +P S+ + L + L + + P W SE + + IR RG
Sbjct: 237 IRAVPRYSVTIDNL-EALNTVCPTIGILPSAIPCLWKSSEGKAKSKGRSSVKSIRSSGRG 295
Query: 405 -----------------NITIYGVPYSEHSSFTELREFVQV 428
+ Y +PYSEH+ F+EL +F+
Sbjct: 296 EGLTEMDCNPLSPPKLFDKDSYTLPYSEHACFSELEDFMHT 336
>gi|358336048|dbj|GAA54614.1| DNA cross-link repair 1A protein [Clonorchis sinensis]
Length = 1386
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 145/284 (51%), Gaps = 50/284 (17%)
Query: 193 LELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY-LHTGDFR-----------ASR 240
+ LN I G+ V ++ANHCPG+ + F L+ + + LHTGDFR +
Sbjct: 1067 IPLNESFPICGIDVVAMDANHCPGSVMFLFHLKSMKRFILHTGDFRFHLDMLLPPSPLAD 1126
Query: 241 LMQSYPLLVNHR----VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
++ +P+ V+ + ++ +YLDTTYC+ +Y FP ++ ++ V +T+ L+K P T+VV
Sbjct: 1127 IVGMHPIPVSSKAISQLHTVYLDTTYCSSQYDFPPQQVIIAGAVEVTRGQLEKDPNTVVV 1186
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW------PELSGNLCTQGNDTLL 350
G Y++GKE ++ L ++++ + ++ +++ + L ++ + L
Sbjct: 1187 CGMYTLGKERFVYGLASELNLRVWLHRNQHQLVSTAALNGCTVCASLMTHVVSNQQRAQL 1246
Query: 351 HVLPMSSLKFETLKDYLKPYG--------------NQYAAVLAFRPTGWTYSETVGNQ-- 394
HVLPM+ L +L Y + G N+ ++ +RPTGW++ +
Sbjct: 1247 HVLPMAQLGMSSLIQYRRTLGPSNDQTPFNSASTVNRSRPLVVWRPTGWSHQTSAKTNKL 1306
Query: 395 ----LDLIRPLSRG--------NITIYGVPYSEHSSFTELREFV 426
LD +PL G NI IYG YSEHSS++EL++FV
Sbjct: 1307 FQTTLDSSKPLPEGIKLQQCNDNIRIYGAAYSEHSSYSELKQFV 1350
>gi|344275329|ref|XP_003409465.1| PREDICTED: 5' exonuclease Apollo [Loxodonta africana]
Length = 544
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 149/309 (48%), Gaps = 36/309 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
I TP VD + +FL+H H DH GL W+ P+YCSP++A L+ L V
Sbjct: 6 IAHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPVSAHLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 PKQWIRALEVGESHVLPLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
M P L + +V+ LYLD T CNP PS+++ ++ L ++K P+ + +
Sbjct: 124 IPSMLKEPALRLGKQVHTLYLDNTNCNPALILPSQQEATRQIIEL----IRKYPQHNIKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G YS+GKES+ + AL + + S RR L+ L+ N +H + +
Sbjct: 180 GLYSLGKESLLEQL--ALEFRTWVVLSPRR-LELVQLLGLADVFTVDENAGRIHAVDRTE 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ T+ + N+ +A PT R + + I+ +PYS+HS
Sbjct: 237 ICRSTMLHW-----NRTHPTIAILPTS--------------RKIHISHPDIHIIPYSDHS 277
Query: 418 SFTELREFV 426
S++ELR FV
Sbjct: 278 SYSELRAFV 286
>gi|390346028|ref|XP_003726462.1| PREDICTED: 5' exonuclease Apollo-like [Strongylocentrotus
purpuratus]
Length = 635
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 152/309 (49%), Gaps = 32/309 (10%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
I GTP VD +R +FL+H H DH GL W + PIYCS +T ++V V
Sbjct: 6 ITGTPIAVDYWRRNKSPSSKVFFLSHAHSDHTSGLSSTWRY-PIYCSEVTGKVVVAKCGV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
S I L + H+I + + VTL++ANHCPGA + F G+ +L+TGDFR
Sbjct: 65 KQSLIKTLSVGNGHIIPLDETGKETMTVTLIDANHCPGATIFLFEGYFGR-FLYTGDFRF 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
M S +L +N V+ LYLD TY +P+ FP ++D ++ + L + P + VV+
Sbjct: 124 HPCMFSDTVLGLNRPVDRLYLDNTYNSPENNFPGEDDCKVKIMEV----LAEYPYSNVVL 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
G + +GKE + + I++ G KI R +++ D ++ ++ + V+P+ +
Sbjct: 180 GMHQLGKEDLLMDIAEFYGGKIQVTPERLSIIELLDCKDVFTT-----SEARIRVIPVHT 234
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ ++ + N + P+ S+ R + +++ +PYS HS
Sbjct: 235 ITNSAVEQW-----NSEFPTIVIIPSAIFRSQR--------RSRLANHPSVFIIPYSSHS 281
Query: 418 SFTELREFV 426
S+ EL FV
Sbjct: 282 SYNELIRFV 290
>gi|224113605|ref|XP_002332533.1| predicted protein [Populus trichocarpa]
gi|222832669|gb|EEE71146.1| predicted protein [Populus trichocarpa]
Length = 360
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 161/342 (47%), Gaps = 71/342 (20%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV-------RMCL 183
+VD F K AYFLTH H DH GL +W GP++CS LTA+L+ + L
Sbjct: 6 ISVDRF----TKSSQAYFLTHLHTDHTQGLTSKWGKGPLFCSKLTAKLLPFKFPDFNLSL 61
Query: 184 LVNP-SYIHPLELN--TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR--- 237
L + S I P + T HV+ L+ +HCPG + FR + G C ++TGDF+
Sbjct: 62 LRHSFSLISPTTGSQITAHVMA------LDTHHCPGVVMFLFRGEFG-CLMYTGDFQWEV 114
Query: 238 --------ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK 289
SRL+ +L N V+VLYLD TYCNP Y FP++E VV + + L+
Sbjct: 115 DSKRAKDARSRLLN---VLKNETVDVLYLDNTYCNPSYDFPTREVAAQQVVDIIASHLEH 171
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
+V+G ++GKE + + IS+ L +KI+ R LQ+ T+ + T
Sbjct: 172 D----IVIGIDTLGKEELLIHISRVLNIKIWLWLER---LQTMHLLGFHDTFTTKNSLTR 224
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTG--WTYSETVGNQLDLIRPL--SR-- 403
+ +P SL ETL+ N + P+G W G+ +L L SR
Sbjct: 225 VRAVPCYSLSVETLEGL-----NTMRPTIGIMPSGLPWVLKPVKGDD-NLFGSLLTSRYK 278
Query: 404 ---------GNIT--------IYGVPYSEHSSFTELREFVQV 428
GN+ ++ VPYS H F E++EF+++
Sbjct: 279 KRQPSDKLDGNLAYAERYHQYMFSVPYSYHLCFAEIQEFIEL 320
>gi|207342260|gb|EDZ70073.1| YMR137Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 616
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 161/337 (47%), Gaps = 73/337 (21%)
Query: 121 PFYKKIP---GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH---GPI----Y 170
P +K I G VD F Y + + S YFL+HFH DHY GL K W++ PI Y
Sbjct: 215 PSFKIIKFNNGHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLY 274
Query: 171 CSPLTARLVRMCLLVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQC 229
CS +TA LV + + I L +N + D + V L+ANHCPGA ++ F+
Sbjct: 275 CSKITAILVNLKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANS 334
Query: 230 Y-------LHTGDFRASRLM-----QSYPLLVNHRVNVLYLDTTYCNPKYKFPSK----E 273
Y LHTGDFR++ M + N ++ +YLDTTY Y FPS+ E
Sbjct: 335 YDKPIRQILHTGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCE 394
Query: 274 DVLNYVVRLTKNCLKK-------------QPKTLV--------VVGAYSIGKESVFLAIS 312
V ++ +RL K+ K + KTL +VG Y+IGKE + + I
Sbjct: 395 TVADFTLRLIKHGKNKTFGDSQRNLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKIC 454
Query: 313 KALGVKIYANASRRR------VLQSFD-----WPE--LSGNLCTQGNDTLLHVLPMSSLK 359
+ L K++ + + VLQ+ + W E L+ NL +++ +H++P+ LK
Sbjct: 455 EFLKTKLFVMPNSVKFSMMLTVLQNNENQNDMWDESLLTSNL----HESSVHLVPIRVLK 510
Query: 360 F-ETLKDYLKP-------YGNQYAAVLAFRPTGWTYS 388
ET++ YLK Y V+ F PTGW+++
Sbjct: 511 SQETIEAYLKSLKELETDYVKDIEDVVGFIPTGWSHN 547
>gi|401626290|gb|EJS44243.1| pso2p [Saccharomyces arboricola H-6]
Length = 666
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 177/395 (44%), Gaps = 104/395 (26%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH-------GPIYCSPLTARLVRMCL 183
VD F Y + S +FL+HFH DHY GL K W++ +YCS +TA LV +
Sbjct: 235 IVVDGFNYKASDTISQFFLSHFHSDHYIGLKKSWNNPEENTVKKTLYCSKITAILVNLKF 294
Query: 184 LVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHF-----RLQDG--QCYLHTGD 235
+ I L N + D + V L+ANHCPGA ++ F R +D + LHTGD
Sbjct: 295 KIPMDEIQILPTNKRFWITDTISVVSLDANHCPGAIIMLFQEFLSRSEDKPIRQILHTGD 354
Query: 236 FRAS----RLMQSY-PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK- 289
FR++ R ++ + N ++ +YLDTTY Y FPS+ V N V T LK+
Sbjct: 355 FRSNAGMIRTIERWLTETSNDIIDQVYLDTTYLTMGYNFPSQNSVCNTVADFTSRLLKQG 414
Query: 290 -----------------------QP-KTLVVVGAYSIGKESVFLAISKALGVKIYANASR 325
QP K L +VG Y+IGKE + + I + L K++ +
Sbjct: 415 KNKTFGDSQRNLFYFQKKKALTSQPHKFLFLVGTYTIGKEKLAVKICELLKTKLFVMPNS 474
Query: 326 RR------VLQSFD-----WPE--LSGNLCTQGNDTLLHVLPMSSLKF-ETLKDYLKPYG 371
+ VLQ+ + W E L+G++ ++ +H++P+ LK E++ YLK
Sbjct: 475 VKFSMIQIVLQNNENENDKWDEDLLTGDM----RESFVHLVPIRVLKSQESIDIYLKSLK 530
Query: 372 -------NQYAAVLAFRPTGWTY-------------SETVGNQ---LDLIRPLSRGN--- 405
V+ F PTGW++ +E GN L+L++ + +
Sbjct: 531 ELETDCLTNVEDVVGFIPTGWSHNFGLKYQKSNDNDNEMNGNIGYCLELMKNDEKNDGSE 590
Query: 406 ---------------ITIYGVPYSEHSSFTELREF 425
++ VPYSEHSSF +L +F
Sbjct: 591 FEISSILRQYKKYNKFQVFNVPYSEHSSFDDLVKF 625
>gi|218189175|gb|EEC71602.1| hypothetical protein OsI_03999 [Oryza sativa Indica Group]
Length = 432
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 156/346 (45%), Gaps = 66/346 (19%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR--WSHGPIYCSPLTAR-LVRMCLLVNP 187
+VD F GS AYFLTH H DH GLG W HGP+YCSP+TAR L V+
Sbjct: 6 VSVDKFSGGS----QAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPVTARPLPTRFPGVDA 61
Query: 188 SYIHPLELNTEHVID----------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
S + PL + V VT + A HCPG+ + FR D C L+TGDFR
Sbjct: 62 SLLRPLAPGASASLSLSSPSTGRAVSVVVTAIPALHCPGSLMYLFR-GDLGCMLYTGDFR 120
Query: 238 ------ASRLMQSYPL--LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK 289
+R + L L V+VLYLD TYC+P FP + V +V N ++
Sbjct: 121 WELRCERARAAKKALLDALAGDTVDVLYLDNTYCHPSLSFPPRPIVAEQIV----NIVRA 176
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGN---LCTQGN 346
P +++G ++GKE + L IS+AL K+ +R LQ+ + N TQ +
Sbjct: 177 HPDHEIIIGVDTLGKEDLLLHISRALQTKVIWVWPQR--LQTTHLLGIDDNQEIFTTQTS 234
Query: 347 DTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTG--WTYSETVGNQLDLIRP---- 400
T + +P SL E+L D L N + P+G W + + G ++
Sbjct: 235 LTRIRAVPRYSLTIESL-DAL----NTVCPTIGIMPSGIPWLWKNSKGKAKSGVKSPAKS 289
Query: 401 -----LSRGNITI---------------YGVPYSEHSSFTELREFV 426
L G I + Y +PYSEH+ F EL +F+
Sbjct: 290 IRCKGLDEGAIEMDYDPLSPPKLFEKDSYSLPYSEHACFAELEDFM 335
>gi|342320970|gb|EGU12908.1| DNA repair protein Pso2/Snm1, putative [Rhodotorula glutinis ATCC
204091]
Length = 925
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 108/231 (46%), Gaps = 46/231 (19%)
Query: 101 KASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGL 160
KA L K +R PFYK I G TVDAF+YG I GC AYFL+H H DHY L
Sbjct: 321 KAEEADKQKGRLPKGEERKVPFYKWIDGMEITVDAFKYGKIDGCKAYFLSHAHSDHYQNL 380
Query: 161 GKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALI 220
WSHG IY S T L+++ L + Y+ PL ++ + G+ VTL++ANHCPG+ L
Sbjct: 381 NSSWSHGEIYASQTTINLIKLKLKLKDEYLFPLPMDKTVKVHGIDVTLIDANHCPGSVLF 440
Query: 221 HFR--LQDGQC-----------YLHTGDFRAS-----RLMQSYPLLVN------------ 250
F D + YLH GDFRAS SYP
Sbjct: 441 LFEGPHTDPKSPFSKTPNRIFRYLHCGDFRASPQHILHPSMSYPTPATSRMMARASSSTS 500
Query: 251 ----------------HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKN 285
R++ +YLDTTY +P Y FP++E V++ L +
Sbjct: 501 QPSSSQPPDPLPGRTLKRLDAIYLDTTYLSPSYCFPAQELVISACAELVRE 551
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 24/161 (14%)
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDT 348
K+ + LV+VG YSIGKE + AI++AL K++ ++ +R + + D P+L L +
Sbjct: 710 KKERLLVLVGTYSIGKERIVKAIAQALSTKVFCDSYKRSLFLAQDDPDLHALLTEDPLEA 769
Query: 349 LLHVLPMSSLKFETLKDYLKPYG-----NQYAAVLAFRPTGWTY-SETVGN--------Q 394
+H+ + + E +++YL + + ++ RPTGWTY SET Q
Sbjct: 770 QVHIGGLRDITREAMQEYLAKFKAPRIEGGFTKMIGLRPTGWTYRSETKDKYPSIPKILQ 829
Query: 395 LDLIRPLSRGNI----------TIYGVPYSEHSSFTELREF 425
++ R S + +GVPYSEHSSF EL F
Sbjct: 830 IEQQRKFSPAGLYPQRDSTPITMAFGVPYSEHSSFFELTCF 870
>gi|297845690|ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
lyrata]
gi|297336568|gb|EFH66985.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 159/337 (47%), Gaps = 56/337 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--------RMC 182
+VD +R KG AYFLTH DH GL WS GP+YCS +TA L
Sbjct: 6 ISVDRWR----KGSQAYFLTHMQSDHTRGLSGGWSKGPLYCSRITASLFPSRFPGFDLSL 61
Query: 183 LLVNPSY-IHPLELNTEHVIDGVKVTLL--EANHCPGAALIHFRLQDGQCYLHTGDFR-- 237
L V P Y L L + V++ + +A+HCPG+ + FR D C+L+TGDFR
Sbjct: 62 LRVVPLYSWTSLSLRSPSSGSTVRLHFMAIDAHHCPGSMMFLFR-GDFGCFLYTGDFRWD 120
Query: 238 ASRLMQSYPLLVN--HR--VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
A ++ +LV+ H V++LYLD TYCNP Y FPS++ +L + + P
Sbjct: 121 ADASDEARTILVDAIHEFPVDILYLDNTYCNPIYSFPSRQ----VAAQLVADIIASHPSH 176
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL 353
+++ S+GKE + L +S+ L +KI+ R R + + ++ T + T + +
Sbjct: 177 DIIIAVDSLGKEELLLHVSRVLNIKIWVWPERLRTMHLLGFQDV---FTTDTSLTRVRAV 233
Query: 354 PMSSLKFETLKDYLKPYGNQYAAVLAFRPTG--WTYS-------------------ETVG 392
P S +TL+ N + P+G W + ET+
Sbjct: 234 PRYSFSIQTLEGL-----NTMCPTIGIMPSGLPWVKTPFKGDDKLSGSFLTASMKNETIS 288
Query: 393 NQLDL-IRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
Q +L + + + +Y V YS+HS + E+ EF+++
Sbjct: 289 AQKELEAAAVHKFHDYMYSVHYSDHSCYEEIGEFIKL 325
>gi|326428581|gb|EGD74151.1| DNA cross-link repair 1B protein [Salpingoeca sp. ATCC 50818]
Length = 1328
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 153/313 (48%), Gaps = 31/313 (9%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
+ TP VD +R G YFLTH H DH GL W G I+CS ++ L+ +
Sbjct: 8 LANTPIAVDTWRQA--PGVRLYFLTHAHADHCNGLISSWRAGRIFCSEISKALIIHKYNI 65
Query: 186 NPSYIHPLELNTEHVI---DGVK----VTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ I LE+ +H+I D K VTL++ANHCPGA + F+ G L TGDFR
Sbjct: 66 DADLITALEVGEKHLIPLDDSGKHTMYVTLIDANHCPGAVMFLFQGYFG-TVLCTGDFRY 124
Query: 239 SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
+ Q +L V+ LYLD TYCNP+ + PS+E + RL + P +++G
Sbjct: 125 T--PQQTSVLEGVSVDHLYLDNTYCNPRCRHPSQEMAKMQLFRL----IDDHPDYDILLG 178
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSL 358
++GKE V L ++ I+ + + + P TQ D+ HV+P
Sbjct: 179 VDTLGKEDVLLDVASKYSAAIHVSEPQLATYRVAGIP--CSAFTTQPEDSRFHVVP---- 232
Query: 359 KFETLKDYLKPYGNQYA---AVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
+ + K Y++ Y Q A + A+ P+ +S +Q ++ +R ++ VPYS
Sbjct: 233 RHQLTKAYVEGYDIQPALGVVLTAYNPSA--FSTVDPSQHHSVKATTR----LHRVPYSL 286
Query: 416 HSSFTELREFVQV 428
HS+F EL+ FV+
Sbjct: 287 HSNFDELQLFVRT 299
>gi|356544862|ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
Length = 437
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 64/334 (19%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL---------VRMCLLVNPSYIHP 192
+G AYFLTH H DH GL W H P++CS +TA+L + + +++P H
Sbjct: 13 EGSEAYFLTHLHSDHTHGLTPSWHHAPLFCSAVTAKLLPFKFPGFDLSLLRILHPGTTHT 72
Query: 193 LELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR----ASRLMQSYPLL 248
+ L + + VT+++A HCPG+ ++ FR D C L+TGDFR R +S +L
Sbjct: 73 VTLPSL----TLHVTVMDACHCPGSIMLLFR-GDFGCILYTGDFRWEATCERATKSRHVL 127
Query: 249 ---VNH--RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIG 303
+ H V+V++LD TY NP Y FP + ++ + + P V++G ++G
Sbjct: 128 RDALRHVPAVDVVHLDNTYSNPIYDFPPRHVAAQQII----DIIASHPDHEVIIGINTLG 183
Query: 304 KESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETL 363
KE + + IS+AL + I+ R R + + ++ T + T + +P+ S T+
Sbjct: 184 KEDLLVEISRALQIMIWVWPQRLRTMHLLGYDDI---FTTNTSLTRVRAVPVYSFSINTV 240
Query: 364 KDYLKPYGNQYAAVLAFRPTG--WTYSETVGNQLD----LIRPLSRGNIT---------- 407
++ N + P+G W N+L L RG ++
Sbjct: 241 EEL-----NYVCPTIGIMPSGLPWIKKSHQKNELQTGSFLTSRYKRGKLSANTETQIDKQ 295
Query: 408 -------------IYGVPYSEHSSFTELREFVQV 428
IY VPYS+HS++ E+ +FV++
Sbjct: 296 IVKTGSPEKIHKYIYTVPYSDHSNYEEIEDFVKL 329
>gi|242058925|ref|XP_002458608.1| hypothetical protein SORBIDRAFT_03g036570 [Sorghum bicolor]
gi|241930583|gb|EES03728.1| hypothetical protein SORBIDRAFT_03g036570 [Sorghum bicolor]
Length = 401
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 134/284 (47%), Gaps = 36/284 (12%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR--WSHGPIYCSPLTARLVRMCLL-VNP 187
+VD F GS AYFLTH H DH GLG W HGP+YCSP TARL+ ++
Sbjct: 6 VSVDKFSGGS----QAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPTTARLLPSRFPGIDA 61
Query: 188 SYIHPLELNTEHVID---------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR- 237
S I PL I V+VT + A HCPG+ + FR D C L+TGDFR
Sbjct: 62 SLIRPLAPGASASISLSSPSGQPLSVRVTAIPALHCPGSLMYLFR-GDLGCMLYTGDFRW 120
Query: 238 ------ASRLMQSY-PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
A R Q+ L ++VLYLD TYC+P FPS+ V ++V + ++
Sbjct: 121 ELGCDKARRAKQALLDALGGDTIDVLYLDNTYCHPSLNFPSRPVVAEHMV----DIIRAH 176
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
P V++G ++GKE + L IS+AL KI+ R + E TQ + T +
Sbjct: 177 PDHEVIIGVDTLGKEDLLLHISRALQTKIWVWPQRLLTIHLLGIDENREIFTTQTSLTRI 236
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTG--WTYSETVG 392
+P S+ + L+ N + P+G W + + G
Sbjct: 237 RAVPRYSVTIDNLEAL-----NTVCPTIGIMPSGIPWLWKSSEG 275
>gi|150864521|ref|XP_001383367.2| hypothetical protein PICST_56782 [Scheffersomyces stipitis CBS
6054]
gi|149385777|gb|ABN65338.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 628
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 174/403 (43%), Gaps = 119/403 (29%)
Query: 95 PPMKKL--KASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHF 152
PP K + K N T L VD SC Y+ +VDAF Y YFLTHF
Sbjct: 103 PPTKIINSKQRNPIPTLKTLSFPVD-SCSSYE------VSVDAFCYAPHATIDQYFLTHF 155
Query: 153 HYDHYGGLGKRWSHGP-----------------IYCSPLTARLVRMCLLVNPSYIHPLEL 195
H DHYGG+ K+WS+ IYC+ +T L+ C V+P +I LE+
Sbjct: 156 HSDHYGGISKKWSYERVFKEDTDFDNDSKYRRIIYCTKITGVLLTRCFSVDPRFIKHLEM 215
Query: 196 NTEHVID------------------------GVKVTLLEANHCPGAALIHFRLQ--DG-- 227
T ++I G+ VT + ANHCPG+A+ F DG
Sbjct: 216 ETRYIIKSFVDMTQGTSYLQDGGFPSQKCDPGLYVTPITANHCPGSAIFLFESYGVDGSY 275
Query: 228 QCYLHTGDFRASRLMQSYPLLVNHRVNV----------LYLDTTYCNPKYKFPSKEDVL- 276
+ LH GDFR + + +PLL +R N+ +YLDTTY P+Y FP +E V
Sbjct: 276 RTILHCGDFRVNESILKHPLL--YRFNIENENSIPLDKVYLDTTYMAPEYNFPKQELVCE 333
Query: 277 --------------------------NYVVRLTKNCLKKQPKT------------LVVVG 298
N+ T++ + KT L++VG
Sbjct: 334 TIGELFYDLIYQENVDETLSSNSLFSNWFGVFTQSRITDFWKTGSSQSMSKKKKFLILVG 393
Query: 299 AYSIGKESVFLAISKALGVKIYAN--ASRR---RVLQSFDWPELSG-----NLCTQGN-D 347
Y IGKE + +AISK L IY + +SRR +++S++ L+ +L Q +
Sbjct: 394 TYLIGKERLAIAISKRLNCPIYVSTISSRRDKIEIVRSYEDEYLNSVLIEDDLALQSKAE 453
Query: 348 TLLHVLPMSSLKFET-LKDYL--KPYGNQYAAVLAFRPTGWTY 387
++H++PM + T L +Y Y + + RPTGW++
Sbjct: 454 CVVHLVPMKIVSSATELSNYFNYNKYYEHFERCVGLRPTGWSF 496
>gi|198432441|ref|XP_002122832.1| PREDICTED: similar to DNA cross-link repair 1B (PSO2 homolog, S.
cerevisiae) [Ciona intestinalis]
Length = 868
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 159/312 (50%), Gaps = 36/312 (11%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
+ G P +VD F+ + + +FLTH H DH GL RW H +YC+ +TA L+++ +
Sbjct: 6 LDGLPVSVDCFKETADE--RLHFLTHMHSDHTVGLSSRWCH-TVYCTEVTATLMKLKFGI 62
Query: 186 NPSYIHPLELNTEHVID----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241
+ +YI ++ N + + + V ++ NHCPGA + F D L+TGDFR + +
Sbjct: 63 SDTYIQIMDDNHTYCLSCGHTNICVRMIPTNHCPGACMFLFE-TDSTRILYTGDFRFNEM 121
Query: 242 --MQSYPLLVNHR-VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
M+ L R +++LYLD TYC P FPS+++ + ++ + ++ + ++ +V G
Sbjct: 122 VEMEVQKCLNPIRPIDLLYLDNTYCEPSCNFPSQQEAVLNIISICRHHIDER----IVFG 177
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSL 358
IG E++ ++KAL +Y + L + PE G + G L+ +P S L
Sbjct: 178 VSYIGHENLLCLVAKALQEYVYVEEAMLERLLLIN-PEY-GKVFRVGMSARLNAVPNSVL 235
Query: 359 KFETLKDYLKPYGNQYAAV--LAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEH 416
G+Q++AV + +PT S + L + G IT Y +PYS H
Sbjct: 236 N-----------GSQWSAVPTVLIKPTARLGSMRISGNLSTV-----GVIT-YTIPYSNH 278
Query: 417 SSFTELREFVQV 428
S++ EL +FV++
Sbjct: 279 SNYQELEKFVKL 290
>gi|449505918|ref|XP_004174915.1| PREDICTED: DNA cross-link repair 1A protein [Taeniopygia guttata]
Length = 946
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 114/220 (51%), Gaps = 32/220 (14%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYC------ 171
+ CPFYKKIPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K + PIYC
Sbjct: 617 KHCPFYKKIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYSGLTKNFRF-PIYCNKKFKE 675
Query: 172 --SPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEA------NHCPGAALIHFR 223
+ + ++ + C + + +D + +EA H P F
Sbjct: 676 FLTTVKSQEEKHCPFTRKYQVR----GSGQAVDAFQYGEIEAGSGYFITHGPSHRDRGFT 731
Query: 224 LQ---DGQCYLHTGDFRAS--RLMQSY----PL---LVNHRVNVLYLDTT-YCNPKYKFP 270
+ C TG+ S R+ + Y P+ V + + VL LD YC+P+Y FP
Sbjct: 732 SKFRSPINCNKVTGNLVKSKLRVQEQYVHVLPMDTQCVVNGIKVLLLDANQYCSPEYTFP 791
Query: 271 SKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLA 310
S+++V+ + V + + P+TLVV G YSIGKE VFL
Sbjct: 792 SQQEVIQFAVNIAFETVTLNPRTLVVCGTYSIGKEKVFLG 831
>gi|49117767|gb|AAH72667.1| Dclre1a protein [Mus musculus]
Length = 782
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT 175
V R+CPFYK+IPGT FTVDAF+YG I+GC+AYFLTHFH DHY GL K ++ P+YCS +T
Sbjct: 686 VRRTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTR-PVYCSEIT 744
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANH 213
L++ L V YI L ++TE V+D VKV LL+AN
Sbjct: 745 GNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANQ 782
>gi|449020014|dbj|BAM83416.1| similar to DNA cross-link repair protein SNM1 [Cyanidioschyzon
merolae strain 10D]
Length = 694
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 175/360 (48%), Gaps = 61/360 (16%)
Query: 124 KKIPGTP-FTVDAFRYGSIKGCSAY---FLTHFHYDHYGGLGKRWSHGP-----IYCSPL 174
K + G P VD+FR I+ Y FLTH+H DHYGGL +R P +Y SP+
Sbjct: 308 KHVAGLPGCVVDSFRV-PIRANDGYYHFFLTHYHADHYGGL-RRTHFRPGCDRRLYASPI 365
Query: 175 TARLVRMCLLVNPSYIHPLELNTEHVIDGV------------KVTLLEANHCPGAALIHF 222
T ++++ + + + L + I V +V +ANHCPGA ++ F
Sbjct: 366 TVSILQVEYQFDDAVLVRLPVGDPDGITIVDRPGSPGAKPVARVLACDANHCPGAVILIF 425
Query: 223 RL-QDGQCYLHTGDFRASRL-MQSYPLLVN---------HRVNVLYLDTTYCNPKYKFPS 271
++ + GQ +H GD R + + M P+L RV L++DTTY +P+Y FP
Sbjct: 426 QVFETGQTIIHCGDMRYNPICMNRDPVLRRFAATEGDHVQRVAYLHIDTTYSDPRYDFPP 485
Query: 272 KEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANAS---RRRV 328
+E VL +V + + P +L + G Y IGKE V+ +++KALG +Y + S +RRV
Sbjct: 486 QEAVLRALVETAQRDAARAP-SLFLCGTYFIGKERVWASLAKALGTNVYIDPSWKRKRRV 544
Query: 329 -------LQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGN-QYAAVLAF 380
L + W S L + + +H++ M+ ++ L +++ + + V+
Sbjct: 545 LLDCVRSLPTDSW-RFSDVLTERVEASCVHLVRMADVQPMRLLRFMRRAQSLGFRQVIGV 603
Query: 381 RPTGWTYSE-----------TVGNQLDLIRPL---SRGNITIYGVPYSEHSSFTELREFV 426
TGW + + ++ L+ L S + +Y +PYSEHSS++ELR F+
Sbjct: 604 MATGWCQASRPPRGCQRLDGSPADKCSLLERLVLPSNHSCILYKLPYSEHSSYSELRAFI 663
>gi|440494333|gb|ELQ76726.1| tRNase Z [Trachipleistophora hominis]
Length = 360
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 139/262 (53%), Gaps = 34/262 (12%)
Query: 96 PMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYD 155
P K N ++ L K V PF++++P T F VD ++ + FLTHFH D
Sbjct: 4 PFKIFSMRNPENANCTLLKHV----PFHRRVPNTTFIVDYYK-MLVSDVENTFLTHFHSD 58
Query: 156 HYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCP 215
HY GL KR + I+CS TA LV++ + V+ YI+ +E+NT + +D V + EANHCP
Sbjct: 59 HYYGL-KRSFNKNIFCSTTTANLVKLNIKVDVKYINEMEMNTVYRVDNVDIMCFEANHCP 117
Query: 216 GAALIHFRLQDGQCYLHTGDFRASRLM----QSYPLLVNHRVNVLYLDTTYCNPKYK--- 268
GA F +Q+ YLHTGDFR + M QS +V NV Y DT + + Y+
Sbjct: 118 GAVGFIFCVQNVY-YLHTGDFRFNVEMHANLQSLISIVRPGNNVNYFDTVFYDNTYEDYM 176
Query: 269 -FPSKEDVLNYVV------RLTKNCLKKQPKTLVVVGAYSIGKESVFLAIS--------- 312
F S++DV+ V+ ++ N L +T V +YS+GKE +FL+++
Sbjct: 177 HFDSQDDVIFNVITDIFSRNISMNTL-APIQTKYVFPSYSVGKEKLFLSVAYFFNWKVKT 235
Query: 313 ---KALGVKIYANASRRRVLQS 331
K + ++ Y+ +RR++ +S
Sbjct: 236 TEKKIMNIECYSAYTRRQINKS 257
>gi|429965110|gb|ELA47107.1| hypothetical protein VCUG_01380 [Vavraia culicis 'floridensis']
Length = 386
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 170/367 (46%), Gaps = 63/367 (17%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ PF++++P T F VD ++ + S FLTHFH DHY GL K ++ I+CS TA
Sbjct: 13 KHVPFHRRVPNTTFIVDYYKL-LVSDTSHTFLTHFHADHYYGLRKSFNKN-IFCSVTTAN 70
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
LV++ + V+ YI + +N + +D V V EANHCPGA F +Q+ YLHTGDFR
Sbjct: 71 LVKLNIKVDVKYIKEMAMNRVYRVDDVDVMCFEANHCPGAVGFIFCVQNFY-YLHTGDFR 129
Query: 238 ASRLMQS--YPLLVNHRVN-------VLYLDTTYCNPKYKFPSKEDVLNYVVR-----LT 283
+ + + L+ R N ++ D TY N + F S+E+V+ V+R T
Sbjct: 130 FNIDVHGNLHNLISVMRPNDDAKCFDTVFYDNTYENYMH-FDSQEEVICSVIRDILAQAT 188
Query: 284 KNCLKKQPKTLVVVGAYSIGKESVFLAIS------------KALGVKIYANASRRRV--- 328
+ +T V +YSIGKE +FL ++ K ++ Y+ +R ++
Sbjct: 189 SKSVLAPVQTKYVFPSYSIGKEKLFLCVAYYFNWEVNVNTKKNANMQCYSAYTREQINKS 248
Query: 329 --------------------------LQSFDWPELSGNLC--TQGNDTLLHVLPMSSLKF 360
+Q+ PE LC T ND ++ V+P + +
Sbjct: 249 VMDCCKRIRERLGHSSRIFPVFTKAYVQTIKDPETEPLLCVKTNINDAIMEVIPFNYV-- 306
Query: 361 ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFT 420
+K + ++ V+ TGW ++ N + + + + PYSEHSS
Sbjct: 307 NRVKLGILYSKTRFKKVVVICGTGWKKAKKSFNLTRQNGTVVKNGLEVRYYPYSEHSSNA 366
Query: 421 ELREFVQ 427
EL++F +
Sbjct: 367 ELQKFCE 373
>gi|123367345|ref|XP_001296993.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
gi|121876902|gb|EAX84063.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
Length = 356
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 151/304 (49%), Gaps = 14/304 (4%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--RMCL 183
+PGT FTVD K + FL+H H DH G+ ++C+P+TA+++ R
Sbjct: 18 VPGTDFTVDWHCKTDPKYVHS-FLSHAHSDHIAGIPSFKPPRVLHCTPITAKIILLRYPR 76
Query: 184 LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA-SRLM 242
L IH E N+E +ID + + ++ ANH PG+ + F G+ LHTGDFRA + L+
Sbjct: 77 LAKCIQIH--EYNSEFIIDAITIRIINANHTPGSCMFLFETPLGRKILHTGDFRADNTLI 134
Query: 243 QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302
+S VN L++D TY K F S+++ +N+ + +K TL ++G Y++
Sbjct: 135 ESIKKFCP--VNQLFIDCTYATSKLLFLSRQECINWTIERVIENMKSN--TLTLIGTYTL 190
Query: 303 GKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFET 362
GKE + LAIS L + IYA R + + C + T V + + +
Sbjct: 191 GKEELVLAISNKLSIPIYAPKDRYKGIVEMIKCGYCSESCFTNDPTKTRVYLVPIMDCNS 250
Query: 363 LKDYLKPYGNQYAAVLAFRPTGWTYSETVGN-QLDLIRPLSRGNITIYGVPYSEHSSFTE 421
+ + N Y++V A TGW+ N Q+ P+ +T+Y VPYS+HSS E
Sbjct: 251 VSASVWAKQNGYSSVCAIAATGWSGKAGWKNPQITYQGPI---KVTLYEVPYSDHSSPQE 307
Query: 422 LREF 425
L F
Sbjct: 308 LLNF 311
>gi|440798605|gb|ELR19672.1| DNA cross-link repair protein, putative [Acanthamoeba castellanii
str. Neff]
Length = 655
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 159/328 (48%), Gaps = 53/328 (16%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--RMCL 183
+P T VD F+ ++G +AYFLTHFH DHY GL K W GP+YCS T RL+ +
Sbjct: 19 LPNTRLAVDCFK---VRGAAAYFLTHFHADHYAGLSKGWKGGPLYCSETTGRLLGHKFPA 75
Query: 184 LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQ 243
LV +H L H VKV L +A HCPG+ + F G Y HTGDFR +R M
Sbjct: 76 LVEAGLVHHDWL---HYSAEVKVWLTDAGHCPGSVMFLFEGAFG-VYFHTGDFRFNRGML 131
Query: 244 SYPLLVNHR--VNVLYLDTTYCNPKYK-FPSK----------EDVLNYVVRLTKNCLKKQ 290
S P++ + V+ L++DTT+C+P + FP K E + V+++ + Q
Sbjct: 132 SCPVIKRAQGMVDKLFIDTTFCSPFWSAFPPKRWRSLTRTLQEQAIAQVLQI----ISSQ 187
Query: 291 PKTL-VVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW-PELSGNLCTQGNDT 348
P + V + +G + V +A+++ KI+ + R +SF PEL
Sbjct: 188 PHNVQVYLECEMLGTQDVLVAVAEKFKTKIFVEDEKLR--ESFKCVPELK-------RAK 238
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAAVLA-----FRP-TGWTYSETVGN---QLDLIR 399
+ P+ S +F LK+ + Y N+ +L RP T W + G L R
Sbjct: 239 IFAADPLES-RFHLLKN--QRYTNRTEVLLEPDALYIRPSTQWFGQQGNGRGNPALYQTR 295
Query: 400 PL-SRGNITIYGVPYSEHSSFTELREFV 426
P + G I+ V YS HSSF EL FV
Sbjct: 296 PCYAHG---IWHVLYSIHSSFEELEVFV 320
>gi|15223519|ref|NP_174061.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
gi|9802533|gb|AAF99735.1|AC004557_14 F17L21.20 [Arabidopsis thaliana]
gi|17473671|gb|AAL38292.1| unknown protein [Arabidopsis thaliana]
gi|20148601|gb|AAM10191.1| unknown protein [Arabidopsis thaliana]
gi|332192705|gb|AEE30826.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
Length = 422
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 154/337 (45%), Gaps = 56/337 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL-------VRMCL 183
+VD +R GS AYFLTH H DH GL WS GP+YCS TA L + L
Sbjct: 6 ISVDRWRNGS----QAYFLTHIHSDHTRGLSGGWSQGPLYCSRTTASLFPSRFPGFDLSL 61
Query: 184 LVNPSYIHPLELNTEHVIDGVKVTL----LEANHCPGAALIHFRLQDGQCYLHTGDFR-- 237
L L+ G V L ++A+HCPG+ + FR D C+L+TGDFR
Sbjct: 62 LRVVPLFSWTSLSLRSPSSGSTVRLHLMAIDAHHCPGSIMFLFR-GDFGCFLYTGDFRWD 120
Query: 238 --ASRLMQS--YPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
AS ++ + V++LYLD TYCNP Y FPS+ V+L + + P
Sbjct: 121 SDASDEARTTLVAAIDEFPVDILYLDNTYCNPIYSFPSRL----VAVQLVADIIASHPSH 176
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL 353
+++ S+GKE + + +S+ L +KI+ R R + + ++ T + T + +
Sbjct: 177 DIIIAVDSLGKEDLLVHVSRILNIKIWVWPERLRTMHLLGFQDI---FTTDTSLTRVRAV 233
Query: 354 PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY---------------------SETVG 392
P S +TL+ N + P+G + +ETV
Sbjct: 234 PRYSFSIQTLEGL-----NTMCPTIGIMPSGLPWVKRPFKGDDKLSGSFLTASMKNETVS 288
Query: 393 NQLDL-IRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
+ +L + + + +Y V YS+HS + E+ EF+++
Sbjct: 289 AKKELEAAAVHKFHDYMYSVHYSDHSCYEEIGEFIKL 325
>gi|302847337|ref|XP_002955203.1| hypothetical protein VOLCADRAFT_96136 [Volvox carteri f. nagariensis]
gi|300259495|gb|EFJ43722.1| hypothetical protein VOLCADRAFT_96136 [Volvox carteri f. nagariensis]
Length = 1266
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 132/274 (48%), Gaps = 51/274 (18%)
Query: 102 ASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAY----FLTHFHYDHY 157
A+ G + L + V P +PGT VD F S +A LTHFH DHY
Sbjct: 785 AAGGARPSGRLPRWV----PECHTLPGTRILVDFFGPSSKSITAAVSPFRILTHFHADHY 840
Query: 158 G-----------------------------------GLGKRWSHGPIYCSPLTARLVRMC 182
GL + ++ G + SP+TARLV
Sbjct: 841 KAPKEKPRLHNVQHSAIRTEITVFRKPSPHRIPYLKGLTRSFAGGTVLASPVTARLVSER 900
Query: 183 LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFRASRL 241
L + + + L ++T +DGV +TL++ANHCPGAA++ + G LHTGD R
Sbjct: 901 LKLPAARLRTLPMDTPVEVDGVCLTLVDANHCPGAAMVVAQPPGGWPPVLHTGDCRLGDH 960
Query: 242 MQSYP---LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTK-NCLKKQPKTLVVV 297
M+++P LLV R L LDTTYC+P+Y+FP + VL+ V+ K K + L V
Sbjct: 961 MRNHPAMQLLVGRRCT-LVLDTTYCDPQYEFPPQRAVLDAVLEAVKAESFNK--RALFVF 1017
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQS 331
G Y+IGKE +FL ++ A+G K+Y + + L +
Sbjct: 1018 GTYTIGKERLFLEVAAAMGQKVYCSKEKAATLAA 1051
>gi|308805462|ref|XP_003080043.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
gi|116058502|emb|CAL53691.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
Length = 517
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 154/335 (45%), Gaps = 43/335 (12%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG-KRWS----HGPIYCSPLTARLVRMCLLV 185
+D + + + AYFLTH H DH GLG +RWS IYC +T ++
Sbjct: 19 IAIDFWAPSASRNIRAYFLTHAHADHVVGLGARRWSPETLGARIYCDEITREILVSKWPT 78
Query: 186 NPSYIHPLELNTEHVI-----DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
++ LE N H + ++VTL++A HCPG+ ++ +G+ +HTGDFR
Sbjct: 79 LGRHVKALERNRGHGVRLTRETTIEVTLIDAGHCPGSVVVCVEGPNGR-LVHTGDFRRED 137
Query: 241 LMQSYPL---LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ L + V+ L+LD TYC+PK+ FP + + +VR C+ P +V+
Sbjct: 138 WIAREALPRAMTRAPVDYLFLDNTYCHPKHAFPGRAEATEDIVRF---CV-SNPGRAIVL 193
Query: 298 GAYSIGKESVFLAISKALGVKI------YANASRRRVLQSFDWPELSGNLCTQGNDTL-- 349
G S+GKE + +A+S+A+G + + +S R L E + N++L
Sbjct: 194 GIDSLGKEDLVIAVSEAIGAPVEIPDERFLPSSYTRFLTGHRACERENFIRRSMNESLDV 253
Query: 350 -----LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSE------------TVG 392
+ +P ++ TL+ +K + A LA PTGW+ E +
Sbjct: 254 TRRTHVRCVPKQHVRPSTLRALVKGLRHDDAPPLAILPTGWSAIERQRGEGAGVSGPSEH 313
Query: 393 NQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ +D + I VPYS H+ + EL FV+
Sbjct: 314 DPIDSVVEFDDEAGRIVAVPYSLHAPYDELEAFVR 348
>gi|448100689|ref|XP_004199411.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
gi|359380833|emb|CCE83074.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
Length = 685
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 177/441 (40%), Gaps = 146/441 (33%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPI-----------------YCSPL 174
VDAF Y + YFLTHFH DHYGGL K W + + YCS +
Sbjct: 186 AVDAFNYSPHEEIEQYFLTHFHSDHYGGLTKSWFYERVFGDDNDFSNDSKYRKILYCSEI 245
Query: 175 TARLVRMCLLVNPSYIHPLELNTE---HVID-----------------GVKVTLLEANHC 214
TA LVR+ ++ +I PL LN HV D G+ VTL+ ANHC
Sbjct: 246 TADLVRIRFHIDRRFIRPLCLNKRYLVHVYDSSDLPDGGREEGSSNIPGLYVTLINANHC 305
Query: 215 PGAALIHFR--LQDG--QCYLHTGDFRASRLMQSYPLLVN--------HRVNVLYLDTTY 262
PG+A+ F DG + LH GDFR ++ + ++PLL ++ +YLDTTY
Sbjct: 306 PGSAIFLFESISLDGSTKFILHCGDFRVNKDILAHPLLNKFSLEYDCPFELDEVYLDTTY 365
Query: 263 CNPKYKFPSKEDVLNYVVRLTKN---------------------CLKK------------ 289
Y FP +E V + + + LK+
Sbjct: 366 FMSSYNFPKQEKVCEALAHMFNDLSCDKGTGGSDNKSLFTQWFGSLKQSRITDFLNPHNR 425
Query: 290 -QPKTLVVVGAYSIGKESVFLAISKALG-----VKIYANASRRRVLQSFDWPELSGNLCT 343
+ K L+++G Y IGKE + +++SK L V + + +++ L+ L
Sbjct: 426 AKKKFLILIGTYLIGKEKIAISLSKKLRNAPIFVSNVFSKDKFSIIRCLREAYLNSVLTD 485
Query: 344 Q------GNDTLLHVLPMSSLKFET-LKDYL--KPYGNQYAAVLAFRPTGWTYS------ 388
G D ++H++PM + L +Y Y + + RP+GWT+S
Sbjct: 486 DDLGKEFGGDCMIHLVPMKIVDSNADLSNYFNHNSYFQHFERCVGVRPSGWTFSGRGASK 545
Query: 389 ------ETVGNQL-DLIR-----------------------------PLSRGNI------ 406
T ++L DLI+ PL + +
Sbjct: 546 SESFIPNTNSSELTDLIQTYTPFMSSLVDIMEHDPGYSYHEDILPQVPLGKTSTGKNDMS 605
Query: 407 -TIYGVPYSEHSSFTELREFV 426
IY VPYSEHSSF EL F+
Sbjct: 606 NRIYVVPYSEHSSFRELCYFL 626
>gi|300708505|ref|XP_002996430.1| hypothetical protein NCER_100477 [Nosema ceranae BRL01]
gi|239605732|gb|EEQ82759.1| hypothetical protein NCER_100477 [Nosema ceranae BRL01]
Length = 443
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 121/221 (54%), Gaps = 20/221 (9%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
P YK+I T + VD F Y IK S YFL+HFH DHY GL K +S+ PIYCS TA L+
Sbjct: 27 PSYKRISFTNYVVDCF-YIDIKNASHYFLSHFHSDHYYGLKKSFSY-PIYCSITTANLIE 84
Query: 181 MCLLVNPSYIHPLELNTEHVI-DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
L PLE N + + DG V+L++A+HCPGA F + +G LHTGDFR +
Sbjct: 85 ---LKYKCKTMPLENNKNYCLEDGNIVSLIDAHHCPGAVCFIFYV-NGAFVLHTGDFRCT 140
Query: 240 RLMQSYPL-LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
+ L L+ ++ ++LD T+ K FPS+EDV++ V+ + +N K LV +
Sbjct: 141 ---YDFTLQLMKYKFTTIFLDNTF-EGKKPFPSQEDVIHRVLDIMRN--NKNKNCLVPIN 194
Query: 299 ------AYSIGKESVFLAISKALGVKIYANASRRRVLQSFD 333
Y IGKE +FL ++ + I + +V + +D
Sbjct: 195 YKYLFCTYMIGKEKIFLCAAEFFDMSIKIEPDKFKVYKCYD 235
>gi|328849752|gb|EGF98926.1| hypothetical protein MELLADRAFT_40551 [Melampsora larici-populina
98AG31]
Length = 143
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 82/141 (58%), Gaps = 4/141 (2%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
+ GT VDAF+YG I +AYFL+H H DHY L W HG +YCS TA L+ L V
Sbjct: 1 MEGTTIAVDAFKYGKIPNITAYFLSHAHADHYTRLSHTWDHGFVYCSQTTANLICHNLGV 60
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQC----YLHTGDFRASRL 241
++ PL+ N ++DGVKVT+L+ANHCPG++L F Q YLH GDFRAS
Sbjct: 61 KKQWVKPLKDNEPTMVDGVKVTVLDANHCPGSSLFLFEGVKSQGKPFRYLHCGDFRASPA 120
Query: 242 MQSYPLLVNHRVNVLYLDTTY 262
+P L +LDTTY
Sbjct: 121 QLRHPALNFFFFFFFFLDTTY 141
>gi|300121917|emb|CBK22491.2| unnamed protein product [Blastocystis hominis]
Length = 468
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 192/449 (42%), Gaps = 102/449 (22%)
Query: 62 CLLQTERKLKQANLFDMWGLKSNSESEAN---------CLFSPPMKKLKASNGKSTATHL 112
CL+ +E K + NL + KS S S+A L S +KK+K +S
Sbjct: 28 CLVDSESKKTKRNLVSQYFTKSVSSSDATESDSQMSLSPLSSSSVKKIKTKKWQS----- 82
Query: 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
+ R P +IP T F D FR GCS +F +HFH DH GL K++ G I+ +
Sbjct: 83 --VPQRQNP-SARIPHTLFLRDFFR----SGCSVFF-SHFHTDHMQGLTKKFI-GDIFAT 133
Query: 173 PLTARLVRMCLLVNPSYIHPLELN------------------------------------ 196
P T LV ++ ++HPL +
Sbjct: 134 PTTCNLVANKFQIDRHHLHPLRIGEHYYLTNCKTQHIPAVMEWIHREDPSYPLNSTSLIL 193
Query: 197 TEHVIDG------VKVTLLEANHCPGAALIHFRLQDGQ--------------CYLHTGDF 236
E+V D V+V +++ANHCPG+ + F L D L+TGDF
Sbjct: 194 NENVSDSALQTRLVRVDVIDANHCPGSCMFLFSLFDWNETTDPHKPSFHLFYRVLYTGDF 253
Query: 237 R-ASRLMQSYPL--LVNHR---VNVLYLDTTYCNPKYKFPSKEDVLNYVV----RLTKNC 286
R SR++ L ++R +++L +D TY N Y FP ++ V+N R ++
Sbjct: 254 RFESRMLDDGILRRFSDNRGESLDLLMVDNTYNNEAYNFPRQQCVVNTAAWVLDRFWRDG 313
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE--LSGNLCTQ 344
L + +V++ +YS+GKE+++L ++K + R+ + ++ E ++ T+
Sbjct: 314 LHRGSDLVVLIESYSVGKENLWLHLAKTFDLPSVRKRERKARIACYEEFESVYKQHITTE 373
Query: 345 GNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGN------QLDLI 398
DT L V F + Q+ V+ PTGWT+ E +L
Sbjct: 374 KTDTPLWVGMARGKLFRDPAE-----TAQFQRVVVLSPTGWTWEEVSKKKKPDDPELCAY 428
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+GN G+PYSEHSS EL EF++
Sbjct: 429 SFRRKGNRITIGLPYSEHSSCDELDEFLE 457
>gi|448104432|ref|XP_004200270.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
gi|359381692|emb|CCE82151.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
Length = 688
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 175/441 (39%), Gaps = 146/441 (33%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPI-----------------YCSPL 174
VDAF Y + YFLTHFH DHYGG+ K W + + YCS +
Sbjct: 189 AVDAFNYSPHEEIEQYFLTHFHSDHYGGITKSWFYERVFGDDNDFSNDSKYRKILYCSEI 248
Query: 175 TARLVRMCLLVNPSYIHPLELNTE---HVID-----------------GVKVTLLEANHC 214
TA LVR+ ++ +I PL LN HV D G+ VTL+ ANHC
Sbjct: 249 TADLVRIRFHIDQRFIRPLCLNKRYLVHVYDSSDLPNGGKEENGSDVPGLYVTLISANHC 308
Query: 215 PGAALIHFR--LQDG--QCYLHTGDFRASRLMQSYPLLVN--------HRVNVLYLDTTY 262
PG+A+ F DG + LH GDFR ++ + ++ LL ++ +YLDTTY
Sbjct: 309 PGSAIFLFESISLDGSSKFILHCGDFRVNKDILAHNLLNRFSLEYGCPFELDEVYLDTTY 368
Query: 263 CNPKYKFPSKEDVLNYVVRLTKNC----------------------------------LK 288
Y FP +E V + + + +K
Sbjct: 369 FMSSYNFPKQEKVCEALADMFNDLSCDKGTGGSENKSLFTQWFGSLKQSRITDFLNPHIK 428
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALG-----VKIYANASRRRVLQSFDWPELSGNLCT 343
+ K L+++G Y IGKE + +++SK L V + + +++ L+ L
Sbjct: 429 TKKKFLILIGTYLIGKEKIAISLSKKLKNTPIFVSNVFSKDKFSIIRCIREEYLNSVLTD 488
Query: 344 Q------GNDTLLHVLPMSSLKFET-LKDYLKPYG--NQYAAVLAFRPTGWTYS------ 388
D ++H++PM + T L +Y G + + RP+GWT+S
Sbjct: 489 DDLGKEFDGDCMIHLVPMKIVDSNTDLSNYFNHNGYFQHFERCVGVRPSGWTFSGRGASK 548
Query: 389 ------ETVGNQL-DLIR-----------------------------PLSRGNI------ 406
T ++L DLI+ PL + +
Sbjct: 549 SESFIPNTNSSELTDLIQTYTPFMMNLVDVMGDDPGYSYHEDILPQVPLGKSSKGKNDMS 608
Query: 407 -TIYGVPYSEHSSFTELREFV 426
IY VPYSEHSSF EL F+
Sbjct: 609 NRIYVVPYSEHSSFRELCYFL 629
>gi|145553259|ref|XP_001462304.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74830382|emb|CAI39059.1| Putative DNA interstrand cross-link repair protein [Paramecium
tetraurelia]
gi|124430143|emb|CAK94931.1| unnamed protein product [Paramecium tetraurelia]
Length = 471
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 150/322 (46%), Gaps = 48/322 (14%)
Query: 126 IPGTPFTVDAFRYGSIKGCS--AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
I T VD F Y YFLTH H DHY G+ W +G I+CS +T L+ +
Sbjct: 4 ISYTNIIVDDFGYARRNPLKRYIYFLTHMHSDHYQGISNGWDYGQIFCSTVTKALLLVKF 63
Query: 184 L-VNPSYIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
V P++ TE + VKVT L+ANHCPGA +I F+ G LHTGD R +
Sbjct: 64 PGVKGVMTIPMKTPTEIELCKKYKVKVTFLDANHCPGAVMILFQGYFG-TILHTGDMRFN 122
Query: 240 RLM-----QSYPL--LVNHR------VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
M Q YP + N ++ L LD TYC+P +KFP++++ + +
Sbjct: 123 MEMIPKNPQLYPPQNISNENGKCSIDIDELILDNTYCDPIFKFPNRDEAFKMLCEI---- 178
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFD-WPELSGNLCTQG 345
+ K P V + S+GKE + + ++K I N R ++ + + + E TQG
Sbjct: 179 IDKNPNNRVFLCVDSVGKEELMVELAKHYDTVIVVNEQRYEIVTAMNFYVEYFTLDKTQG 238
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGN 405
+ V+ ++ E LKD +A TGW + T Q+ P +R
Sbjct: 239 ---WIEVIRKGEVE-ERLKD---------KNTIAITATGW--ANTTSYQM----PDNRR- 278
Query: 406 ITIYGVPYSEHSSFTELREFVQ 427
Y +PYS HS+F E+ +FV+
Sbjct: 279 ---YVIPYSLHSNFNEMHQFVK 297
>gi|323453522|gb|EGB09393.1| hypothetical protein AURANDRAFT_24389, partial [Aureococcus
anophagefferens]
Length = 220
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 101/207 (48%), Gaps = 4/207 (1%)
Query: 127 PGTPFTVDAFRY-GSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV-RMCLL 184
P F VD F + + + LTH H DH GL + G IYCS +T RLV R
Sbjct: 14 PFGAFVVDGFNFVRAFPDVRHWLLTHAHSDHTCGLRANFDAGTIYCSTITKRLVAREFPG 73
Query: 185 VNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLM-- 242
I L+ + +T ++A HCPGA L + G LHTGD RAS +
Sbjct: 74 RLGDRIETLDPGASVTVGRTTITAIDAGHCPGAVLFLLAHESGATALHTGDMRASPAVTE 133
Query: 243 QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302
++ L V+VLYLDTTY P+ FPS+ + + + L ++PKTL + AYS+
Sbjct: 134 ETKKALAGRAVDVLYLDTTYAAPQNDFPSQGEACAVIADVVTQELAREPKTLFLANAYSV 193
Query: 303 GKESVFLAISKALGVKIYANASRRRVL 329
GKE+ F A +A G Y + R L
Sbjct: 194 GKENAFDAAIRASGGLGYVSGRRAESL 220
>gi|320168671|gb|EFW45570.1| DNA cross-link repair protein 1B [Capsaspora owczarzaki ATCC 30864]
Length = 729
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 27/225 (12%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP +D +R +FL+H H DH GL W G IYCSP+T L+ V
Sbjct: 6 IPNTPIALDCWR--PPPAIKIFFLSHLHADHTQGLSPSWRQGTIYCSPVTRLLLLHKFGV 63
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR- 237
+ S + LEL+ V+ + + VT +ANHCPGA + G L+TGDFR
Sbjct: 64 DASLVETLELDEPTVVPLDPEGAETMTVTAFDANHCPGAVMFLLEGYFGNV-LYTGDFRF 122
Query: 238 ASRLMQSYPLLVNHR------------VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKN 285
L+ L+ R V+VLYLD TYC+PK+ FP++E ++ VV +
Sbjct: 123 CPALIHPEDSLLGARLAGGAHGGRRLNVDVLYLDNTYCDPKFAFPTREAGVDAVV----D 178
Query: 286 CLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
+++ P V++G ++GKE + A++ L I + SR LQ
Sbjct: 179 IIEQHPDHRVMIGIDTLGKEELLEAVALRLQTWIVVSQSRLNALQ 223
>gi|159473960|ref|XP_001695097.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276031|gb|EDP01805.1| predicted protein [Chlamydomonas reinhardtii]
Length = 550
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 140/313 (44%), Gaps = 50/313 (15%)
Query: 127 PGTPFTVDAFRYGSIKGCSAY----FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMC 182
PG P VD F S +A LTHFH DHY GL K +S G + SP+TARLV
Sbjct: 261 PG-PLLVDYFSPASRAIPAALAPYRILTHFHADHYKGLTKSFSGGVVLASPVTARLVAER 319
Query: 183 LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAAL----IHFRLQDGQCYLHTGDFRA 238
L + + + L ++T +DGV +TL++ANHCPGAA+ + Q A
Sbjct: 320 LRLPAARLRTLPMDTPVTVDGVTLTLVDANHCPGAAMFIAEVLPPPPPTQQMQQQQQAGA 379
Query: 239 SRLMQSYPLL--VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTK-NCLKKQPKTLV 295
+ ++ +P L + R L LDTTY +P Y FP ++DVL+ V+ + K+
Sbjct: 380 AGHVKQHPALQALVGRRCTLVLDTTYADPAYVFPPQQDVLDAVLTAVRAEAFNKRVGDRA 439
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW-PELSGNLCTQGNDTLLHVLP 354
VGA + A+ Y + + L + P S + T + +H +P
Sbjct: 440 GVGAEARDAGCRLCAV--------YCSKEKAATLSACGLAPRYSSLITTNHLEANIHAVP 491
Query: 355 MSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYS 414
+ + + L L Y +Y+AV+ F VPYS
Sbjct: 492 LFKVTLDGLAAILSQYRGRYSAVIGFS-----------------------------VPYS 522
Query: 415 EHSSFTELREFVQ 427
EHSSF+ELR FV+
Sbjct: 523 EHSSFSELRSFVR 535
>gi|402590499|gb|EJW84429.1| hypothetical protein WUBG_04661 [Wuchereria bancrofti]
Length = 561
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 144/300 (48%), Gaps = 49/300 (16%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRM--------CLLVNPSYIHPLELNTE 198
YFLTH H DHYG +G +W++G IYCSP+TAR++ + C + IH L+LN
Sbjct: 26 YFLTHAHSDHYGAVGNKWNNGNIYCSPVTARVLPIVTQRHKSKCGGIRSHIIHALDLNVW 85
Query: 199 HVIDGVKVTLLEANHCPGAALIHF---RLQDGQCYLHTGDFRASRLMQSY------PLLV 249
H +DG V LL+ANH PG+ + F R+ +G+ L TGDFRA +Q Y +L
Sbjct: 86 HYMDGFSVMLLDANHIPGSVMFLFEGDRISEGRI-LFTGDFRAD--IQLYKNVFAASVLH 142
Query: 250 NHRVNVLYLDTTYCN-PKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVF 308
+N +YLDTTY N + +FPS+E + + + ++V +G+E +
Sbjct: 143 ETSLNTIYLDTTYINCTREEFPSREASSAEMCNVLRKLFDGFKSVTIMVP--KVGREQLL 200
Query: 309 LAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLK 368
+ I+ KI+ + R +V + LS T+ DT + ++
Sbjct: 201 VDIAVEFKCKIWVDYIRFQVAEILG---LSEYFTTKKEDTSIWTCTRQNISS-------- 249
Query: 369 PYGNQYAAVLAFR-PTGWTYSETVGNQLDLIRPLS-RGNITIYGVPYSEHSSFTELREFV 426
FR P + ++ L I+P S N + + YS+HSS E+R+F+
Sbjct: 250 ----------VFRDPNVYVIDVSM---LQYIKPNSIINNERMCYIEYSDHSSPNEIRDFL 296
>gi|149244510|ref|XP_001526798.1| hypothetical protein LELG_01626 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449192|gb|EDK43448.1| hypothetical protein LELG_01626 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 639
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 183/493 (37%), Gaps = 198/493 (40%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH-------------------GPIYCS 172
+VDAF + YFLTHFH DHYGG+ K+W++ IYC+
Sbjct: 83 SVDAFNFAPHNIIDKYFLTHFHADHYGGISKKWAYERVFDQNSECDYDDDSKYKKIIYCT 142
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVID-----------------------------G 203
+T +L+ + V+P +I LE++T + + G
Sbjct: 143 VITGKLLTLYFSVDPRFIKMLEMDTRYKVQHYAKDDDGLEIVCQDVEDGGIIELEGTSPG 202
Query: 204 VKVTLLEANHCPGAALIHFRL--QDGQCY--LHTGDFRASRLMQSYPLL----------- 248
+ V + ANHCPGA + F DG + LH GDFR + + +PLL
Sbjct: 203 LYVIPITANHCPGAGIFLFESIGVDGHIHRILHCGDFRVNMTILDHPLLNRFSVGRHNIE 262
Query: 249 VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK------------------- 289
+++ +YLDTTY +P Y FP +E V + + L +N ++
Sbjct: 263 ETDKIDQVYLDTTYMSPTYVFPKQELVCDTLAELFENLTRQEGDPNNEGIDTKETRLGNP 322
Query: 290 ----------QPKT---------------------------LVVVGAYSIGKESVFLAIS 312
QP+ L++VG Y IGKE + +AI
Sbjct: 323 LYNTWFGSLVQPRITDFWKSIGGNAGSGTTNTKKKKKKKKFLILVGTYVIGKERLAIAIL 382
Query: 313 KALGVKIY-ANASRRR----VLQSFDWPELSGNLCTQG-------------NDTLLHVLP 354
K L +IY +N + R+ +L+++ P L L +D ++H++P
Sbjct: 383 KRLKCQIYVSNINNRKNKYEILRTYQDPYLDSVLTEDELGLGFEDQAEDDVSDCIVHLVP 442
Query: 355 MSSL-KFETLKDYL--KPYGNQYAAVLAFRPTGWTYSE------------------TVGN 393
M+ + L +Y Y + + RPTGW++++ TV
Sbjct: 443 MNIVGSITELSNYFNHNRYYEYFERCVGLRPTGWSFAQNGKKPDSISQQNLSSSASTVTA 502
Query: 394 QLDLIRPLSRGNITI----------------------------------------YGVPY 413
+L+ PL+ I Y VPY
Sbjct: 503 ELEETVPLTPLEEVIKCMKVRTSYNALDHILSQGPKPQTKLKTGKNLPDNELYRIYSVPY 562
Query: 414 SEHSSFTELREFV 426
SEHSSF EL FV
Sbjct: 563 SEHSSFRELAYFV 575
>gi|432103989|gb|ELK30822.1| 5' exonuclease Apollo [Myotis davidii]
Length = 498
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 134/309 (43%), Gaps = 74/309 (23%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAFLLHRHLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKRWIRALEVGESHVLPLDEIGRETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGDFRF 123
Query: 239 SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ M P L V +++ LYLD T CNP PS+ + +V L ++K P+ V +
Sbjct: 124 TPAMLKEPALSVGKQIHTLYLDNTNCNPALDLPSQHEAAQQIVAL----IRKHPQHDVKI 179
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
+++ E +G + + + H +
Sbjct: 180 DVFTVE--------------------------------EKAGRIHAVNHTEICH---SAM 204
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
L++ NQ +A PT R + + I+ VPYS+HS
Sbjct: 205 LRW-----------NQARPTIAILPTS--------------RKIHSSHPNIHIVPYSDHS 239
Query: 418 SFTELREFV 426
S+ ELR FV
Sbjct: 240 SYPELRAFV 248
>gi|413952235|gb|AFW84884.1| hypothetical protein ZEAMMB73_126664 [Zea mays]
Length = 374
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 115/244 (47%), Gaps = 38/244 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK--RWSHGPIYCSPLTARLVRMCLLVNPS 188
+VD F GS AYFLTH H DH GLG W HGP+YCSP TARL+
Sbjct: 6 VSVDKFSGGS----QAYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLL--------- 52
Query: 189 YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR-------ASRL 241
P+ G+ +LL PG+ + FR D C L+TGDFR A R
Sbjct: 53 ---PIRF------PGIDASLLRP-LAPGSLMYLFR-GDLGCMLYTGDFRWELGCDEARRA 101
Query: 242 MQSY-PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
Q L ++VLYLD TYC+P FP + V V+ + ++ P V++G
Sbjct: 102 KQDLLDALDGDTIDVLYLDNTYCHPSLNFPPRPVVAEQVI----DIIRSHPDHEVIIGVD 157
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF 360
++GKE + L IS+AL KI+ R + + E TQ + T + +P S+
Sbjct: 158 TLGKEDLLLHISRALQTKIWVWPQRLQTIHLLGIDENRDIFTTQTSLTRIRAVPRYSVTI 217
Query: 361 ETLK 364
+ L+
Sbjct: 218 DNLE 221
>gi|212274939|ref|NP_001130918.1| uncharacterized protein LOC100192022 [Zea mays]
gi|194690442|gb|ACF79305.1| unknown [Zea mays]
gi|413952237|gb|AFW84886.1| hypothetical protein ZEAMMB73_126664 [Zea mays]
Length = 229
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 105/208 (50%), Gaps = 30/208 (14%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK--RWSHGPIYCSPLTARLVRMCLL-VNPS 188
+VD F GS AYFLTH H DH GLG W HGP+YCSP TARL+ + ++ S
Sbjct: 7 SVDKFSGGS----QAYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLLPIRFPGIDAS 62
Query: 189 YIHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR- 237
+ PL I + VT + A HCPG+ + FR D C L+TGDFR
Sbjct: 63 LLRPLAPGASASIYLFSPSSGQSLSLHVTAIPALHCPGSLMYLFR-GDLGCMLYTGDFRW 121
Query: 238 ------ASRLMQS-YPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
A R Q L ++VLYLD TYC+P FP + V V+ + ++
Sbjct: 122 ELGCDEARRAKQDLLDALDGDTIDVLYLDNTYCHPSLNFPPRPVVAEQVI----DIIRSH 177
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVK 318
P V++G ++GKE + L IS+AL K
Sbjct: 178 PDHEVIIGVDTLGKEDLLLHISRALQTK 205
>gi|68468735|ref|XP_721426.1| hypothetical protein CaO19.2926 [Candida albicans SC5314]
gi|68469279|ref|XP_721154.1| hypothetical protein CaO19.10443 [Candida albicans SC5314]
gi|46443061|gb|EAL02345.1| hypothetical protein CaO19.10443 [Candida albicans SC5314]
gi|46443344|gb|EAL02626.1| hypothetical protein CaO19.2926 [Candida albicans SC5314]
Length = 830
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 163/394 (41%), Gaps = 132/394 (33%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH-------------------------G 167
VDAF + + YFLTHFH DHYGG+ K+W++
Sbjct: 258 VDAFCFAPHDTINQYFLTHFHADHYGGISKKWAYERVFGNDEDAFNNQTFDFDDDSIYKK 317
Query: 168 PIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID------------------------- 202
IYC+ +T RL+ + ++P +I LEL+T + I
Sbjct: 318 IIYCTGITGRLLTLRYSIDPRFIKHLELDTRYKIKSYTEKEDDEEEEEEEEEEEMESNDM 377
Query: 203 --GVKVTLLEANHCPGAALIHFRL--QDGQCY--LHTGDFRASRLMQSYPLL----VNHR 252
G+ VT + ANHCPGAA+ F D + Y LH GDFR + + ++P+L + H
Sbjct: 378 TPGLYVTPITANHCPGAAIFFFESIGIDNKIYRILHCGDFRVNMEILNHPILRPFSLTHS 437
Query: 253 VNVL-------YLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK----------------- 288
N L YLDTTY +PK+ P +E V + L ++ ++
Sbjct: 438 KNNLLQSIDKVYLDTTYMSPKHNLPKQELVCEIMANLFQDLIQQEINKDEQKKTTSNLFS 497
Query: 289 -----------------------------KQPKTLVVVGAYSIGKESVFLAISKALG--- 316
++ K L+V+G Y IGKE + ++ISK L
Sbjct: 498 NWFGNFTQSRITDFCTTSSTSKNGLTRPIRKKKFLIVIGTYIIGKEKLAISISKRLNNCL 557
Query: 317 VKIYANASRR---RVLQSFDWPELS---------GNLC-TQGNDTLLHVLPMSSL-KFET 362
+ + + SR+ + +++ L+ GN+ T +D ++H++PM+ + E
Sbjct: 558 IYLSSIGSRKDKFEIFKTYKNDYLNSVMTIEKEFGNINDTNDSDCMIHLVPMTLVSNNEE 617
Query: 363 LKDYL--KPYGNQYAAVLAFRPTGWTYSETVGNQ 394
L Y Y + + PTGW+YS+ +
Sbjct: 618 LSKYFNHNKYYQFFERCIGLCPTGWSYSKIANTK 651
>gi|321470539|gb|EFX81515.1| hypothetical protein DAPPUDRAFT_317592 [Daphnia pulex]
Length = 473
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 136/304 (44%), Gaps = 25/304 (8%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K + G P VD ++ G YFLTH H DH GL W+ IY S L L L
Sbjct: 5 KLLTGLPIAVDFWKLPPSNGLYLYFLTHLHTDHTKGLTSTWTET-IYTSSLNRDLAISML 63
Query: 184 LVNPSYIHPLELNTEHVIDG-VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLM 242
VNP I PLE+ + ++ V VT ++ANH G+ + F G+ L+TGDFR M
Sbjct: 64 KVNPELIKPLEIGVSYKMNRFVSVTPIDANHIKGSVMYLFEGSFGRL-LYTGDFRWCESM 122
Query: 243 QSYPLLVN----HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
+ P+L N +NVLY+D T+ + +FP++E V+++ KN P ++ G
Sbjct: 123 INDPVLKNLSESKDLNVLYIDNTFEHIGNEFPTREQCTLDVLKIMKN----HPYHRIIFG 178
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSL 358
+IGKE V L S K+Y + + + P T D+LL ++ +
Sbjct: 179 CQTIGKEDVLLQASLERKEKVYVPETILKCYRLLGLP-CEEIFTTDQADSLLWFEKLNQI 237
Query: 359 KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSS 418
LK K + +G Y T +L I+ VPYS HSS
Sbjct: 238 SQFDLK---KKNSEMPTIAIKLTASGLLYKSTKFKDDEL----------IFTVPYSNHSS 284
Query: 419 FTEL 422
+EL
Sbjct: 285 ASEL 288
>gi|238879282|gb|EEQ42920.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 822
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 163/393 (41%), Gaps = 131/393 (33%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH-------------------------G 167
VDAF + + YFLTHFH DHYGG+ K+W++
Sbjct: 260 VDAFCFAPHDTINQYFLTHFHADHYGGISKKWAYERVFGNDEDAFNNQTFDFDDDSIYKK 319
Query: 168 PIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID------------------------- 202
IYC+ +T RL+ + ++P +I LEL+T + I
Sbjct: 320 IIYCTGITGRLLTLRYSIDPRFIKHLELDTRYKIKSYTEKEDDEEEEEEEEEEMESNDMT 379
Query: 203 -GVKVTLLEANHCPGAALIHFRL--QDGQCY--LHTGDFRASRLMQSYPLL----VNHRV 253
G+ VT + ANHCPGAA+ F D + Y LH GDFR + + ++P+L + H
Sbjct: 380 PGLYVTPITANHCPGAAIFLFESIGIDNKIYRILHCGDFRVNMEILNHPILRPFSLTHSK 439
Query: 254 NVL-------YLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK------------------ 288
N L YLDTTY +PK+ P +E V + L ++ ++
Sbjct: 440 NNLLQSIDKVYLDTTYMSPKHNLPKQELVCEIMANLFQDLIQQERNKDEQKQTTSNLFSN 499
Query: 289 ----------------------------KQPKTLVVVGAYSIGKESVFLAISKALG---V 317
++ K L+V+G Y IGKE + ++ISK L +
Sbjct: 500 WFGNFTQSRITDFCTTSSTSKNGLTRPIRKKKFLIVIGTYIIGKEKLAISISKRLNNCLI 559
Query: 318 KIYANASRR---RVLQSFDWPELS---------GNLC-TQGNDTLLHVLPMSSL-KFETL 363
+ + SR+ + +++ L+ GN+ T +D ++H++PM+ + E L
Sbjct: 560 YLSSIGSRKDKFEIFKTYKNDYLNSVMTIEKEFGNINDTNDSDCMIHLVPMTLVSNNEEL 619
Query: 364 KDYL--KPYGNQYAAVLAFRPTGWTYSETVGNQ 394
Y Y + + PTGW+YS+ +
Sbjct: 620 SKYFNHNKYYQFFERCIGLCPTGWSYSKIANTK 652
>gi|403358146|gb|EJY78711.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Oxytricha trifallax]
Length = 673
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 135/320 (42%), Gaps = 43/320 (13%)
Query: 127 PGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR------------WSHGPIYCSPL 174
P F VD F Y + K +FL+H H DH GL KR W G IY SP
Sbjct: 41 PYKDFKVDNF-YSNRKEQFTFFLSHMHEDHLRGLSKRSEYGNYGGPDEDWQWGTIYTSPK 99
Query: 175 TARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTG 234
+ ++ + Y+ LEL ++ I V L EANHCPGA + F+ G LHTG
Sbjct: 100 SKNILLLRFPNLKPYVRALELYKQYTIKDRTVMLYEANHCPGAVMFLFKGAKG-TVLHTG 158
Query: 235 DFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTL 294
DFR M Y N +++ LYLD T+ FP +E+ + + ++
Sbjct: 159 DFRFKPSMIDY--FTNIKIDYLYLDNTFATTDEDFPPQEEAFEKLYSIIEHKRGVDQNYQ 216
Query: 295 VVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN-------D 347
+ Y++GKE VF +++ KI R L + S T+ D
Sbjct: 217 FHLFCYTLGKEEVFHNLAQLFSTKIMMQKDRITKLNAIGMG--SSKFVTRDEWSKDKTGD 274
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNIT 407
+ V M L +T +D K + + TGW NQ ++ P
Sbjct: 275 CFIQVKVMKDLP-KTKEDCDKKKNVHFLCM-----TGW------KNQYNINHP------R 316
Query: 408 IYGVPYSEHSSFTELREFVQ 427
+ +PYS HSS+ EL +FV+
Sbjct: 317 FHKIPYSSHSSYKELDQFVK 336
>gi|340502457|gb|EGR29145.1| hypothetical protein IMG5_161990 [Ichthyophthirius multifiliis]
Length = 587
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 146/325 (44%), Gaps = 49/325 (15%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAY--FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
I T VD F YG Y FLTH H DHY GL + W++GPIYCS T RL+ +
Sbjct: 4 ISFTNIVVDEFSYGKQNPLKNYLYFLTHMHSDHYQGLSQNWNYGPIYCSKTTKRLL-LQK 62
Query: 184 LVNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+ + L++N E I + V L ++NHCPG+ + F G+ LHTGD
Sbjct: 63 FPHLKRVMALDMNEEIRICINEQNKIYISVYLFDSNHCPGSVMFMFEGYFGRI-LHTGDM 121
Query: 237 RAS-RLMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
R S ++++ P+L + +++ D TYC+P+++FP ++ ++++
Sbjct: 122 RFSLKMIEKNPILYPLENKDPQKGRCSLQIDECIFDNTYCDPEFQFPDQDKAKQMLIQII 181
Query: 284 KNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCT 343
+ K V + SIGKE +F+ +S+ I N R + + LC
Sbjct: 182 -DQHKGNQNLRVFLCMDSIGKEEIFVFLSEYYQTLIVVNEQRYQTI-----------LCI 229
Query: 344 QGNDTLLHVLPMSSLKFETLK--DYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL 401
+ + E +K D + N A+ TGW +++ L
Sbjct: 230 KSLPYQYFTTNRNQGWIEIIKKVDRRERIANNPDAI-TITCTGW---------INIRNYL 279
Query: 402 SRGNITIYGVPYSEHSSFTELREFV 426
+ NI Y VPYS HS+F EL F+
Sbjct: 280 TWDNIN-YLVPYSLHSNFQELELFI 303
>gi|312066528|ref|XP_003136313.1| DNA ligase I [Loa loa]
Length = 581
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 144/311 (46%), Gaps = 71/311 (22%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL--------VNPSYIHPLELNTE 198
YFLTH H DHY + +W++GPIYCSP+TA ++ + + IH L+LN
Sbjct: 26 YFLTHAHSDHYAAVDNKWNNGPIYCSPVTAHILPIVTHRPRSKRAGIRSHLIHALDLNVW 85
Query: 199 HVIDGVKVTLLEANHCPGAALIHF---RLQDGQCYLHTGDFRAS-RLMQ---SYPLLVNH 251
H +DG V LL+ANH PG+ + F ++ +G L TGDFRA RL Q + +L
Sbjct: 86 HHMDGFSVMLLDANHVPGSVMFLFEGDKISEGPI-LFTGDFRADIRLYQNIFAVSVLRER 144
Query: 252 RVNVLYLDTTYCN-PKYKFPSKEDVLNYVVRLTKNCLK-KQPKTLVVVGAYSIGKESVFL 309
++ +YLDTTY N + +FPS+E + + + +P T++V +G+E + +
Sbjct: 145 SLSTIYLDTTYINCTREEFPSREVSSAEICNVLRELFDGSKPITIMVP---KVGREQLLV 201
Query: 310 AISKALGVKIYANASRRRV-----LQSFDWPELSGNL---CTQGN------DTLLHVLPM 355
++ KI+ + R +V L + E G CT+ N D HV+ +
Sbjct: 202 DVAVEFKCKIWVDYIRFQVAKILGLSEYFTTEKDGTFIWTCTRRNIRSVLYDEDFHVIDL 261
Query: 356 SSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSE 415
S L+ ++KP Y + + V YS+
Sbjct: 262 SMLR------HIKPNSIIYDERMCY------------------------------VEYSD 285
Query: 416 HSSFTELREFV 426
HSS E+R+F+
Sbjct: 286 HSSPNEIRDFL 296
>gi|340372739|ref|XP_003384901.1| PREDICTED: 5' exonuclease Apollo-like [Amphimedon queenslandica]
Length = 540
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 151/312 (48%), Gaps = 32/312 (10%)
Query: 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL 184
+IP TP VD F S+ + +FLTH H DH GL + IYC+ LT +LV + +
Sbjct: 13 RIPYTPIAVDYFHRPSLPARTLFFLTHSHADHLYGLDSSFDQT-IYCTSLTKQLVLLHIS 71
Query: 185 VNPSYIHPLELNTEHVIDG-------VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
++P + LE + + + VT +++ HCPG+A+ F G LHTGDFR
Sbjct: 72 IDPDLLVELEFDEPRQLQVDCPGNVFISVTTIDSCHCPGSAMFLFEGYFGT-ILHTGDFR 130
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
S + ++PLL N +VLYLD TY +P + FP + + VV+L K+ P +
Sbjct: 131 LSPKLLAHPLLKNLEPDVLYLDNTYNDPIFDFPERSVTCDKVVKLVKD----NPHLRTFI 186
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL-LHVLPMS 356
+GKE + + I ++ I ++ + + ++ ++C+ +D + V+P
Sbjct: 187 AFNKLGKEDLLVNIVRSTDYAIGVSSEQYKKMEILGL----HHVCSLDSDQCQVIVVPFY 242
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEH 416
++ + ++ N+ + + + SE PL + ++ V YS+H
Sbjct: 243 AVTEANVNRWI----NECPTQVIIPTSRFEGSE---------HPL-KAYPCVHIVQYSDH 288
Query: 417 SSFTELREFVQV 428
S+ EL +FV++
Sbjct: 289 CSYKELYQFVEL 300
>gi|156399461|ref|XP_001638520.1| predicted protein [Nematostella vectensis]
gi|156225641|gb|EDO46457.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 136/308 (44%), Gaps = 32/308 (10%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
I TP VD + +FL+H H DH GL W+ IYCS +T R++ L V
Sbjct: 6 IQDTPIAVDIWTRRVCLKSRLFFLSHAHADHTQGLTSSWTKYKIYCSEITKRILMHKLNV 65
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
N + L L V+ + + VTLL+ANHCPGA + F G L+TGDFR
Sbjct: 66 NEDLLVALPLGEPVVLPLDEEGREMLTVTLLDANHCPGAVMFLFEGYFGTI-LYTGDFRF 124
Query: 239 SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
M + L +++ LYLD TYC+P FP+K + + + + L +++
Sbjct: 125 KPAMLLHESLKGKQIDKLYLDNTYCHPSCNFPTKTKTMKLIFDIIRRRLGDD----IIIP 180
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSL 358
++GKE + + I+ I + +L+ D P++ ++ + T + ++ +
Sbjct: 181 LRTLGKEDLLVKIALEFNCWIGVTPKKMELLKWLDLPDV---FTSEWHKTQI-IVAQHPV 236
Query: 359 KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSS 418
TL + P+ PT E L ++ VPYS+HSS
Sbjct: 237 NSYTLSQFRDPF--------VILPTALYEGEKSNPYRHLPNYVT--------VPYSDHSS 280
Query: 419 FTELREFV 426
F EL FV
Sbjct: 281 FKELLRFV 288
>gi|26338211|dbj|BAC32791.1| unnamed protein product [Mus musculus]
Length = 213
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQETMTVTLIDANHCPGSVMFLFEGYFGT-ILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKN 285
+ M P L++ +++ LYLD T CNP PS+++ +V+L +
Sbjct: 124 TPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQ 171
>gi|148675639|gb|EDL07586.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Mus musculus]
Length = 213
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQETMTVTLIDANHCPGSVMFLFEGYFGT-ILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKN 285
+ M P L++ +++ LYLD T CNP PS+++ +V+L +
Sbjct: 124 TPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQ 171
>gi|393911301|gb|EFO27761.2| DNA ligase I [Loa loa]
Length = 500
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 21/207 (10%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL--------VNPSYIHPLELNTE 198
YFLTH H DHY + +W++GPIYCSP+TA ++ + + IH L+LN
Sbjct: 26 YFLTHAHSDHYAAVDNKWNNGPIYCSPVTAHILPIVTHRPRSKRAGIRSHLIHALDLNVW 85
Query: 199 HVIDGVKVTLLEANHCPGAALIHF---RLQDGQCYLHTGDFRAS-RLMQ---SYPLLVNH 251
H +DG V LL+ANH PG+ + F ++ +G L TGDFRA RL Q + +L
Sbjct: 86 HHMDGFSVMLLDANHVPGSVMFLFEGDKISEGPI-LFTGDFRADIRLYQNIFAVSVLRER 144
Query: 252 RVNVLYLDTTYCN-PKYKFPSKEDVLNYVVRLTKNCLK-KQPKTLVVVGAYSIGKESVFL 309
++ +YLDTTY N + +FPS+E + + + +P T++V +G+E + +
Sbjct: 145 SLSTIYLDTTYINCTREEFPSREVSSAEICNVLRELFDGSKPITIMVP---KVGREQLLV 201
Query: 310 AISKALGVKIYANASRRRVLQSFDWPE 336
++ KI+ + R +V + E
Sbjct: 202 DVAVEFKCKIWVDYIRFQVAKILGLSE 228
>gi|149030436|gb|EDL85473.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_b [Rattus norvegicus]
Length = 221
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 10/168 (5%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 186 NPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 65 SKQWIRALEIGESHVLPLDEIGQETMTVTLIDANHCPGSVMFLFEGYFGT-ILYTGDFRY 123
Query: 239 SRLMQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKN 285
+ M P L + +++ LYLD T CNP PS+++ +++L +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEATQQIIQLIRQ 171
>gi|25151114|ref|NP_740895.1| Protein MRT-1 [Caenorhabditis elegans]
gi|20338940|emb|CAD30439.1| Protein MRT-1 [Caenorhabditis elegans]
Length = 608
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 49/317 (15%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNP 187
G +VD F S G FLTH H DHY GL K+W+ +YCSP TA+L+ +
Sbjct: 220 GEDISVDYFLKKS--GSRYNFLTHAHSDHYRGLDKKWTRS-VYCSPETAKLLPHIMGYTA 276
Query: 188 ------SYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHF---RLQD--GQCYLHTGDF 236
I+PLE N H D +VTL+ ANHCPGA + F ++++ G L TGDF
Sbjct: 277 DSPPPAGLINPLEENVPHKFDSFQVTLVNANHCPGAVMFVFEGSKIEEIAGGAVLCTGDF 336
Query: 237 RASRLM-------QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK 289
RA ++ + + ++YLD TY + FP + + +++ ++
Sbjct: 337 RADKMFLESLKPGNQLHWMTEIKFGIIYLDNTYFSLDMPFPERCEAEKILLK----AIEA 392
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
P +V+ + +G+E + AIS+ L I R+ + D+ G L Q D
Sbjct: 393 HPHENIVIPLHRLGREELIQAISRILNEPIMVYDERKVISDLLDFSSNCGVL-KQYRD-- 449
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIY 409
+ +K +Q + ++ +T+ V + +IR
Sbjct: 450 ----------IKVIKKGSYCEISQNSVIIDISMLYYTFGNGVNDDEGIIR---------- 489
Query: 410 GVPYSEHSSFTELREFV 426
+PYS+HSS +E+ +F+
Sbjct: 490 -IPYSDHSSRSEILKFL 505
>gi|429962339|gb|ELA41883.1| hypothetical protein VICG_01067 [Vittaforma corneae ATCC 50505]
Length = 466
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
P K+I + TVD F I C+ YFL+HFH DHY L K + P++CS T+ LV
Sbjct: 17 PVCKRILDSTITVDCFDL-KITNCTHYFLSHFHADHYTKLNKSFEF-PVFCSKTTSELV- 73
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
C + + LE+ T + V L+EANHCPGA F L + Q LHTGDFR +
Sbjct: 74 -CAALGAKAV-GLEMYTSYDFGSFVVRLIEANHCPGAVCFIF-LINNQFVLHTGDFRYCK 130
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVV-RLTKNCLKKQPKTLVVVGA 299
+ + + +YLD TY N FPS+++ ++ ++ RL ++ + V+
Sbjct: 131 VYHTLDI----SFKCVYLDNTYQNF-ISFPSQKEAISKILQRLDQDNRLCRLNVCVLCCT 185
Query: 300 YSIGKESVFLAISKALGVKI 319
Y IGKE +FL+I++ L K+
Sbjct: 186 YRIGKEKIFLSIAEYLNEKV 205
>gi|340053163|emb|CCC47450.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 698
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 102/230 (44%), Gaps = 65/230 (28%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLE--------LNTE 198
+FL+HFH DHY G+ RWSHG IY S TA ++ L V + PL+ L T
Sbjct: 72 FFLSHFHSDHYAGITSRWSHGTIYASRATANMLCWKLEVEKQCVVPLDYSVPYQFCLETG 131
Query: 199 HVIDG---------------VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQ 243
++ G VTLL A+HCPG+A+ FR LHTGDFR SR
Sbjct: 132 KLVQGEEAAGLEAKHCDTNCFSVTLLPADHCPGSAMFLFRSPVFGTVLHTGDFRFSRNPP 191
Query: 244 SYPLLVNHR------------------VNVLYLDTTYCNPKYKFPSKEDVLNYVV----- 280
+ P + R V+ L+LD T+C+P++ FPS D LN +
Sbjct: 192 TVPRALCSRSGSSTPTLLEAATPLAGKVDRLFLDNTFCSPEFDFPSCVDTLNEINTAILD 251
Query: 281 ---------RLTKNCLKKQPKTL----------VVVGAYSIGKESVFLAI 311
R C Q + L V+VG+Y IGKE V L+I
Sbjct: 252 VFREYERDHRYRTRCDLTQTRLLEEETSEVSIAVLVGSYVIGKELVALSI 301
>gi|170056694|ref|XP_001864146.1| artemis protein [Culex quinquefasciatus]
gi|167876433|gb|EDS39816.1| artemis protein [Culex quinquefasciatus]
Length = 397
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 155/322 (48%), Gaps = 30/322 (9%)
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS-HGPIYCSPLTARLVR 180
F +IPG +VD F + + +FL+H H DH GL GPIY S ++A ++
Sbjct: 7 FIAEIPG--ISVDRFTEANRTKSAVFFLSHCHTDHMQGLQDPEPLPGPIYTSSISAVFLK 64
Query: 181 M-------CLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHT 233
C+ P+++ T + VT L A HCPG+ + F + + L+T
Sbjct: 65 HRYPQLADCIRTLDLGTTPIDMPTGSNPTHLTVTTLPAGHCPGSVMFLFETERDRKILYT 124
Query: 234 GDFRAS-RLMQSYPLLVNHRVNVLYLDTTYCNPKYK-FPSKEDVLNYVVRLTKNCLKKQP 291
GDFR S + ++S L + ++VLYLDTT+ N Y FPS+ + L +V+LTK L + P
Sbjct: 125 GDFRLSPKDLRSLLPLQSITLHVLYLDTTFFNRTYTYFPSQSESLAKIVQLTKEWLDRDP 184
Query: 292 KTLVVVGAYSI-GKESVFLAISKALGVKIYAN---ASRRRVLQSFDWPELSGNLCTQGND 347
+ ++ ++ G E +F+ +++ L +I+ N A + R L S D + + G
Sbjct: 185 RNVISFKLPALYGSEFLFIELARQLQQRIHVNAQEAQQYRYLASLD-----DAITSAGGS 239
Query: 348 TLLHVLPMSSLKFETL--KDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGN 405
+ L S+ + L + L P +Y VL RP+ + + R R N
Sbjct: 240 RIHACLRTSNANYRKLPCQPELDP---KYVRVL--RPSALRWRNLKQGESYCWR--LRKN 292
Query: 406 ITIYGVPYSEHSSFTELREFVQ 427
+G+ YS H+S EL +F++
Sbjct: 293 EEEFGICYSNHASCGELEDFLR 314
>gi|170594001|ref|XP_001901752.1| DNA ligase I [Brugia malayi]
gi|158590696|gb|EDP29311.1| DNA ligase I, putative [Brugia malayi]
Length = 608
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 112/218 (51%), Gaps = 23/218 (10%)
Query: 128 GTPFTVDAF-RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL-- 184
G VD F + +IK YFLTH H DHYG + +W++G IYCSP+TA ++ +
Sbjct: 9 GGFIAVDKFPKNAAIK---YYFLTHAHSDHYGAIDNKWNNGNIYCSPVTAHVLPIVTQRH 65
Query: 185 ------VNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHF---RLQDGQCYLHTGD 235
+ IH L+LN H +DG V LL+ANH PG+ + F R+ +G+ L TGD
Sbjct: 66 KSKFGGIRSHIIHALDLNVWHYMDGFSVMLLDANHIPGSVMFLFEGDRISEGRI-LFTGD 124
Query: 236 FRAS----RLMQSYPLLVNHRVNVLYLDTTYCN-PKYKFPSKEDVLNYVVRLTKNCLKKQ 290
FRA + + + +L ++ +YLDTTY N + +FPS+ + + +
Sbjct: 125 FRADIQLYKNVLTASVLRERNLSTIYLDTTYINCTREEFPSRGASSAEMCNVLRKLFDGS 184
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRV 328
++V +G+E + + ++ KI+ + R +V
Sbjct: 185 KSVTIMVP--KVGREQLLVDVAIEFKCKIWVDYIRFQV 220
>gi|72387748|ref|XP_844298.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359450|gb|AAX79887.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800831|gb|AAZ10739.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 720
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 117/258 (45%), Gaps = 68/258 (26%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI----- 201
+FL+HFH DHY G+ ++WSHG IY S T ++ L V S + L+L ++
Sbjct: 74 FFLSHFHSDHYSGITEKWSHGTIYASRATGNVLCWKLGVRRSCVECLDLAVTYIFSLRNG 133
Query: 202 DGVK--------------VTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL------ 241
D VK V L+ ANHCPGA + FR D LHTGDFR S
Sbjct: 134 DLVKKEEGRAECGEGCFSVELIPANHCPGAVMFLFRSADFGTILHTGDFRFSSPAVPALS 193
Query: 242 ---------MQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVR----LTKNC- 286
++S P+L + V+VL+LD TYC P++ FP + + V + + C
Sbjct: 194 IKHRCWEPDLRSNPVLKSMGNVDVLFLDNTYCQPQFTFPDRAAIFQTVNKEVLDMIMGCE 253
Query: 287 -------------LKKQPKTL---VVVGAYSIGKESVFLAISKALGVK-----------I 319
K++ +T+ V+VG+Y IGKE + L++ + K I
Sbjct: 254 RRLSYSQSQEHMQTKEEGQTVSVAVIVGSYFIGKEIIALSVQENFPSKKSGDGAPAYAPI 313
Query: 320 YANASRRRVLQSFDW-PE 336
Y R ++ D+ PE
Sbjct: 314 YVTPERYEAMRQLDYFPE 331
>gi|146182956|ref|XP_001025657.2| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|146143674|gb|EAS05412.2| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 1701
Score = 104 bits (259), Expect = 1e-19, Method: Composition-based stats.
Identities = 93/324 (28%), Positives = 141/324 (43%), Gaps = 45/324 (13%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAY--FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
I T VD F YG Y FLTH H DHY G+ W+ G IYCS +T +L+ +
Sbjct: 4 ISFTNIVVDEFSYGKRHPLKKYIYFLTHMHSDHYQGITPNWNFGTIYCSEVTKKLL-LNK 62
Query: 184 LVNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+ LE+N + I + V L +ANHCPG+ + F G+ LHTGD
Sbjct: 63 FPQLQDVRELEMNKQQKICLNQENKIEINVYLFDANHCPGSVMFMFEGYFGRI-LHTGDM 121
Query: 237 RASR-LMQSYPLL------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
R + L+ + P+L ++ +++ D TYC+P +KFP +E + +
Sbjct: 122 RFNENLIYNNPILYPIEKRNSELKKISLQIDECIFDNTYCDPIFKFPKREKACQMLTEII 181
Query: 284 KNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCT 343
K P +++ S+GKE + + +SK I N R + + D P L T
Sbjct: 182 DK-HKNIPNVRILICVDSLGKEELLVFLSKHYETLIVVNEQRYQSILCMDIPY---QLFT 237
Query: 344 QGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSR 403
D + + K E ++ N+Y ++ TGW N I R
Sbjct: 238 TNRDQGWIEVIRKNEKQERMES-----KNEYC--VSITCTGW------ANIQGYITKDDR 284
Query: 404 GNITIYGVPYSEHSSFTELREFVQ 427
Y +PYS HS+F EL F++
Sbjct: 285 N----YLLPYSLHSNFEELELFIR 304
>gi|261327452|emb|CBH10427.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 720
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 68/258 (26%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI----- 201
+FL+HFH DHY G+ ++WSHG IY S T ++ L V S + L+L ++
Sbjct: 74 FFLSHFHSDHYSGITEKWSHGTIYASRATGNVLCWKLGVRRSCVECLDLAVTYIFSLRNG 133
Query: 202 -------------DGV-KVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL------ 241
+G V L+ ANHCPGA + FR D LHTGDFR S
Sbjct: 134 DLVGKEEGRAECGEGCFSVELIPANHCPGAVMFLFRSADFGTILHTGDFRFSSPAVPALS 193
Query: 242 ---------MQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSK--------EDVLNYVVRLT 283
++S P+L + V+VL+LD TYC P++ FP + ++VL+ ++
Sbjct: 194 IKHRCWEPDLRSNPVLKSMGNVDVLFLDNTYCQPQFTFPDRAAIFQTVNKEVLDMIMECE 253
Query: 284 KNC----------LKKQPKTL---VVVGAYSIGKESVFLAISKALGVK-----------I 319
+ K++ +T+ V+VG+Y IGKE + L++ + K I
Sbjct: 254 RRLSYSQSQEHMQTKEEGQTVSVAVMVGSYFIGKEIIALSVQENFPSKKSGDGAPAYAPI 313
Query: 320 YANASRRRVLQSFDW-PE 336
Y R ++ D+ PE
Sbjct: 314 YVTPERYEAMRQLDYFPE 331
>gi|428176829|gb|EKX45712.1| hypothetical protein GUITHDRAFT_71213, partial [Guillardia theta
CCMP2712]
Length = 165
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHV--IDGV 204
+FLTH H DH GL W G IYCS ++ L+ V+P + +E+ + +D V
Sbjct: 28 FFLTHMHADHTQGLHSEWDEGMIYCSQVSRSLLLDKFDVDPVRVVAMEIGVPKLLRLDTV 87
Query: 205 KVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLM--QSYPLLVNHRVNVLYLDTTY 262
KVT ++ANHCPGA + +F QD + LHTGDFR S M + PL + + L +D TY
Sbjct: 88 KVTCIDANHCPGAVMFYFETQDIR-LLHTGDFRLSPAMIREDSPLAMARDCH-LVVDNTY 145
Query: 263 CNPKYKFPSKEDVLNYVVRL 282
C+PK+ FPS+++ ++ L
Sbjct: 146 CDPKHTFPSQQEAGQRILEL 165
>gi|224079385|ref|XP_002305846.1| predicted protein [Populus trichocarpa]
gi|222848810|gb|EEE86357.1| predicted protein [Populus trichocarpa]
Length = 285
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 102/189 (53%), Gaps = 22/189 (11%)
Query: 254 NVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK------QPKTLVVVGAYSIGKESV 307
N ++LDTTYCNPK+ FP +E+ ++YVV + + + + L +V Y +GKE +
Sbjct: 14 NTVFLDTTYCNPKFVFPLQEESVDYVVSAIEKIGGEGFSGGLEKRVLFLVATYVVGKEKI 73
Query: 308 FLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSL--------- 358
+ I++ K+Y +A + VL+ E SG N++ +HV+ + L
Sbjct: 74 LIEIARRCNRKVYVDARKMEVLRVLGCGE-SGVFTEDENESDVHVVGWNVLGETWPYFRP 132
Query: 359 KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSS 418
F +K+ + G Y V+ F PTGWTY E N+ + S+ + I+ VPYSEHS+
Sbjct: 133 NFVKMKEIMVERG--YNKVVGFVPTGWTY-EVKRNKFAV---RSKDSCEIHLVPYSEHSN 186
Query: 419 FTELREFVQ 427
+ ELRE+V+
Sbjct: 187 YNELREYVK 195
>gi|342180537|emb|CCC90013.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 718
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 104/225 (46%), Gaps = 57/225 (25%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI---- 201
+FL+HFH DHY G+ WSHG I S TA L+R L V+ + + ++ ++
Sbjct: 74 VFFLSHFHSDHYNGINPGWSHGIINASRATANLLRWKLGVSSARVRCMDFGMTYIFSIQS 133
Query: 202 ---------------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS------- 239
D V L+ ANHCPGA + FR LHTGDFR S
Sbjct: 134 GMLLSVESGRAACVEDCFAVELIPANHCPGAVMFLFRSAAFGTVLHTGDFRFSPPSPLTT 193
Query: 240 --RL------MQSYPLLVN-HRVNVLYLDTTYCNPKYKFPSKEDVLNYV--------VRL 282
RL ++ P+L V+VL+ D TYC P++KFP++ +VL ++ +R
Sbjct: 194 TVRLPSWEPDLREDPVLKTLGTVDVLFFDNTYCFPQFKFPARAEVLKWINTEVFNTFLRC 253
Query: 283 TKN--------------CLKKQPKTLVVVGAYSIGKESVFLAISK 313
+N ++ V++G+Y IGKE + L+I +
Sbjct: 254 KENKRASVALGEGGDPHKRNQRVSVAVLIGSYFIGKELIALSIQE 298
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 16/76 (21%)
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYG 410
VLP+ KF LK Q+ VL PTGWT + D + +
Sbjct: 448 EVLPIGKKKFLDLK--------QFDCVLCINPTGWTGKPSKQKISD--------RVVSFK 491
Query: 411 VPYSEHSSFTELREFV 426
VPYSEH SF+EL +FV
Sbjct: 492 VPYSEHCSFSELIDFV 507
>gi|311705697|gb|ADQ01114.1| artemis [Hylobates agilis]
Length = 692
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 162/333 (48%), Gaps = 54/333 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I P+E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIIPIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 GTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F+ +S+ LGV+++ N L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFINLSEELGVQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVL--PMSSLKFE--TLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGN 393
+L T DT +H P + F+ L + +++ +P T W G
Sbjct: 243 HHLTTD-RDTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGE 296
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ + R + Y +S HSS++E+++F+
Sbjct: 297 RSRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|440798159|gb|ELR19227.1| hypothetical protein ACA1_263970 [Acanthamoeba castellanii str.
Neff]
Length = 180
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 97/198 (48%), Gaps = 56/198 (28%)
Query: 117 DRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
++ CP +KKI GT VD F+Y S +TA
Sbjct: 31 EKPCPAFKKINGTNIIVDGFQYKSYS-------------------------------ITA 59
Query: 177 RLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+L+ + L V+P+Y+ PL + T H+++G +VTLL ANHCPGA L+ F++ DG+ LH GDF
Sbjct: 60 KLMFIKLGVSPNYVRPLSMFTPHMVEGTEVTLLPANHCPGAVLLLFKV-DGRYILHVGDF 118
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
R MQSY L + ++ + V+ V+R +K+ TL +
Sbjct: 119 RYHPNMQSYDELRRNEIH------------------KRVVELVLR------EKRESTLFL 154
Query: 297 VGAYSIGKESVFLAISKA 314
VG Y IGKE VF I++
Sbjct: 155 VGTYCIGKEEVFCGIART 172
>gi|327286641|ref|XP_003228038.1| PREDICTED: protein artemis-like [Anolis carolinensis]
Length = 592
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 162/334 (48%), Gaps = 56/334 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGL-----GKRWSHG---PIYCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL +R + +YCSP+T L
Sbjct: 14 LSIDRFDRENLQA-RAYFLSHCHKDHMKGLRAPSMKRRLACSLTVRLYCSPVTKEL---- 68
Query: 183 LLVNP------SYIHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL NP +YI LE+ T I + + VTLL A HCPG+ + F+ ++
Sbjct: 69 LLTNPRYNFWENYIVALEIETPTQISLVDEASGEKEDIVVTLLPAGHCPGSVMFLFQGEN 128
Query: 227 GQCYLHTGDFRASR--LMQSYPLLVNHRV---NVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + + L +RV LYLDTT+C+P+ Y+ PS+E+ + ++
Sbjct: 129 GTV-LYTGDFRLAKGEVARMELLHSGNRVKDIQSLYLDTTFCDPRFYQIPSREECMQGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L +N + +V + + G E +F +S+ LGVK++ N L F + PE+
Sbjct: 188 ELVRNWITLSRYHVVWLNCKAAYGYEYLFTNLSEELGVKVHVNK-----LDMFKNMPEIL 242
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYG-----NQYAAVLAFRP-TGWTYSETVG 392
++ T T +H E ++ P G + +++ +P T W G
Sbjct: 243 YHI-TSDRHTQIHAC-RHPRDDEIMRSNRLPCGMTSQNGKQLHIISVKPSTMW-----FG 295
Query: 393 NQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ + R + Y +S HSSF+E+++FV
Sbjct: 296 ERMRKTNVIVRTGESSYRACFSFHSSFSEIQDFV 329
>gi|311705701|gb|ADQ01116.1| artemis [Symphalangus syndactylus]
Length = 692
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 158/332 (47%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I P+E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIIPIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLRIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|311705695|gb|ADQ01113.1| artemis [Nomascus leucogenys]
Length = 692
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 158/332 (47%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I P+E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIIPIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 GTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|22023557|gb|AAM89124.1| SNM1-like protein [Rattus norvegicus]
Length = 697
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 157/331 (47%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSMKRRLECSLKVFLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T + + V VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYKFWENRIIAIEIETPTQVSLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E+ L V+
Sbjct: 129 GT-VLYTGDFRLAKGEVSRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLRGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + PK +V + + G E +F +S+ LGV+++ + L F + P++
Sbjct: 188 ELVRSWITRSPKHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWNKLPCGMASKTKTVLHTISIKPSTMWFGERTRKTN 302
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSS++E+++F+
Sbjct: 303 VIV----RTGESSYRACFSFHSSYSEIKDFL 329
>gi|326911096|ref|XP_003201898.1| PREDICTED: LOW QUALITY PROTEIN: protein artemis-like [Meleagris
gallopavo]
Length = 714
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 161/339 (47%), Gaps = 66/339 (19%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG-----KRWSHG---PIYCSPLTARLVRMC 182
++D F + +++ AYFL+H H DH GL +R +YCSP+T L
Sbjct: 14 LSIDRFDHDNLRA-RAYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL N Y I LE+ T I + ++VTLL A HCPG+ + F+ ++
Sbjct: 69 LLTNSKYEFWENHIVALEVETPTQISLVDETTGEKEDIEVTLLPAGHCPGSVMFLFQGEN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y PS+E+ LN ++
Sbjct: 129 GTV-LYTGDFRLAKGEAARMELLHSGTRVKDIQSVYLDTTFCDPRFYHIPSREECLNGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSFDWPELSG 339
L ++ +V + + G E +F+ +S+ LG+K++ N R+ + PE+
Sbjct: 188 ELVRSWTSLSRYHVVWLNCKAAYGYEYLFINLSEELGIKVHVN----RLDMFKNMPEILY 243
Query: 340 NLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAA-----------VLAFRP-TGWTY 387
++ T T +H + + DY + GN+ V++ +P T W
Sbjct: 244 HITTD-RYTQIH-----ACRHPKDDDYFR--GNRLPCGITCQNGTPLHVISIKPSTMW-- 293
Query: 388 SETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
G ++ + R + Y +S HSS++E+++F+
Sbjct: 294 ---FGERIKKTNVIVRTGESTYRACFSFHSSYSEIKDFL 329
>gi|124810460|ref|XP_001348885.1| DNA repair metallo-beta-lactamase protein, putative [Plasmodium
falciparum 3D7]
gi|23497787|gb|AAN37324.1| DNA repair metallo-beta-lactamase protein, putative [Plasmodium
falciparum 3D7]
Length = 860
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
Query: 115 IVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPL 174
IVD+ P+ KK + D + K C +FLTHFH DHY + K ++ ++CS +
Sbjct: 16 IVDK-FPYTKKRDALRISEDKEKR---KICRIFFLTHFHADHYTNINKYFNEN-VFCSQI 70
Query: 175 TARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTG 234
T +L+ + V Y+H L++N + + KV ++ANHCPG+ +I+F ++G +HTG
Sbjct: 71 TKKLLVNIIEVQDKYVHNLKINKIYYLFNFKVAFIDANHCPGSVIIYFEFKNGTKIIHTG 130
Query: 235 DFRASRLMQSYPL 247
DFR S + QS+ +
Sbjct: 131 DFRYSNI-QSFLI 142
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 30/188 (15%)
Query: 255 VLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISK 313
++ DT Y N ++ +K D+L YV K + + KTL + G Y++GKE ++L++S
Sbjct: 592 IINSDTKYSNIHMHEKVNKLDLLTYVNE-DKKGEQIKKKTLFLFGTYNLGKEKIYLSLSD 650
Query: 314 ALGVKI-YANASRRRVLQSFDWPELSGNLCTQGN-DTLLHVLPMS---------SLKFET 362
A +KI Y N +R++++SF + + N T + +H++ ++ KF
Sbjct: 651 ACNMKIYYKNEKKRKIIESFLYNKHILNKITDNKLEAQIHIVDINYSYIFPKIDKRKFLN 710
Query: 363 LKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS---RGNITIYGVPYSEHSSF 419
L D + ++ + PTGW ++ S R NI+I+ +PYSEHS+
Sbjct: 711 LID--EEIEKEFDSFYYIIPTGW------------VKKFSFYERNNISIFLIPYSEHSNL 756
Query: 420 TELREFVQ 427
EL+ FV+
Sbjct: 757 DELKNFVK 764
>gi|162135927|ref|NP_671486.2| protein artemis [Rattus norvegicus]
gi|71153328|sp|Q5XIX3.1|DCR1C_RAT RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein; AltName: Full=SNM1-like protein
gi|54035286|gb|AAH83546.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Rattus
norvegicus]
Length = 698
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 157/331 (47%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSMKRRLECSLKVFLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T + + V VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYKFWENRIIAIEIETPTQVSLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E+ L V+
Sbjct: 129 G-TVLYTGDFRLAKGEVSRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLRGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + PK +V + + G E +F +S+ LGV+++ + L F + P++
Sbjct: 188 ELVRSWITRSPKHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWNKLPCGMASKTKTVLHTISIKPSTMWFGERTRKTN 302
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSS++E+++F+
Sbjct: 303 VIV----RTGESSYRACFSFHSSYSEIKDFL 329
>gi|158966680|ref|NP_666226.2| protein artemis isoform 1 [Mus musculus]
gi|71153326|sp|Q8K4J0.2|DCR1C_MOUSE RecName: Full=Protein artemis; Short=mArt; AltName: Full=DNA
cross-link repair 1C protein; AltName: Full=SNM1-like
protein
Length = 705
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 155/331 (46%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + V VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E L ++
Sbjct: 129 GT-VLYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ + L F + P++
Sbjct: 188 ELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 243 HHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 302
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSSF+E+++F+
Sbjct: 303 VIV----RTGESSYRACFSFHSSFSEIKDFL 329
>gi|332216914|ref|XP_003257596.1| PREDICTED: protein artemis [Nomascus leucogenys]
Length = 672
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 153/316 (48%), Gaps = 40/316 (12%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR----- 237
LL +P Y + + + + VTLL A HCPG+ + F+ +G L+TGDFR
Sbjct: 69 LLTSPKY----RFWKKRIKEEIVVTLLPAGHCPGSVMFLFQGNNGTV-LYTGDFRLAQGE 123
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ ++ L ++ + + P +V
Sbjct: 124 AARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWITRSPYHVVW 183
Query: 297 VGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLCTQGNDTL---LH 351
+ + G E +F +S+ LGV+++ N L F + P++ +L T N + H
Sbjct: 184 LNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPDILHHLTTDRNTQIHACRH 238
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLIRPLSRGNITIYG 410
++ L + +++ +P T W G + + R + Y
Sbjct: 239 PKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKTNVIVRTGESSYR 293
Query: 411 VPYSEHSSFTELREFV 426
+S HSS++E+++F+
Sbjct: 294 ACFSFHSSYSEIKDFL 309
>gi|148675984|gb|EDL07931.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_d [Mus musculus]
Length = 704
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 155/331 (46%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 23 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKEL---- 77
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + V VTLL A HCPG+ + F+ +
Sbjct: 78 LLTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSN 137
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E L ++
Sbjct: 138 GT-VLYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGIL 196
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ + L F + P++
Sbjct: 197 ELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDIL 251
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 252 HHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 311
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSSF+E+++F+
Sbjct: 312 VIV----RTGESSYRACFSFHSSFSEIKDFL 338
>gi|311705703|gb|ADQ01117.1| artemis [Gorilla gorilla]
Length = 692
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 157/332 (47%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+
Sbjct: 129 G-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|76154133|gb|AAX25636.2| SJCHGC03696 protein [Schistosoma japonicum]
Length = 166
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR 177
+ CPFYK IP T TVDAF Y I GC+ YFL+HFH DH+ G+ K + G IYCS +T
Sbjct: 56 KKCPFYKWIPDTSITVDAFCYNDIPGCTYYFLSHFHSDHFKGIHKNFK-GHIYCSEVTKN 114
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL 224
L+R + I LEL +I V+VT L+ANHCPG+ + F +
Sbjct: 115 LLRDAYGLGL-VISVLELEKRTLIGDVEVTALDANHCPGSLMFIFHV 160
>gi|76496497|ref|NP_001029027.1| protein artemis isoform a [Homo sapiens]
gi|71153325|sp|Q96SD1.2|DCR1C_HUMAN RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein; AltName: Full=Protein A-SCID; AltName:
Full=SNM1 homolog C; Short=hSNM1C; AltName:
Full=SNM1-like protein
Length = 692
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 157/332 (47%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+
Sbjct: 129 GTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|13872809|emb|CAC37570.1| artemis protein [Homo sapiens]
Length = 692
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 157/332 (47%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+
Sbjct: 129 GTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|74147659|dbj|BAE38706.1| unnamed protein product [Mus musculus]
Length = 573
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 155/331 (46%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + V VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E L ++
Sbjct: 129 GT-VLYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ + L F + P++
Sbjct: 188 ELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 243 HHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 302
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSSF+E+++F+
Sbjct: 303 VIV----RTGESSYRACFSFHSSFSEIKDFL 329
>gi|354468024|ref|XP_003496467.1| PREDICTED: protein artemis-like [Cricetulus griseus]
Length = 688
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 157/331 (47%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y + +E+ T I + V VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRVVTIEIETPTQIALVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E+ L ++
Sbjct: 129 G-TVLYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLKGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSFDWPELSG 339
L ++ + + P +V + + G E +F +S+ LGV+++ + ++ + P++
Sbjct: 188 ELVRSWITRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVD----KMDMFRNMPDILH 243
Query: 340 NLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P T W G +
Sbjct: 244 HLTTDRNTQVHACRHPKAEEYFQWNKLPCGITSKNKAMLHTISIKPSTMW-----FGERT 298
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++R + Y +S HSS++E+++F+
Sbjct: 299 RKTNVIARTGESSYRACFSFHSSYSEIKDFL 329
>gi|114629490|ref|XP_001147049.1| PREDICTED: protein artemis isoform 8 [Pan troglodytes]
Length = 692
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 156/332 (46%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L V+
Sbjct: 129 GTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLRGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|355682952|gb|AER97013.1| DNA cross-link repair 1C [Mustela putorius furo]
Length = 691
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 114/223 (51%), Gaps = 37/223 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL NP Y I +E+ T I + V VTLL A HCPG+ + F+ +
Sbjct: 69 LLTNPKYRFWEKRIVSIEIETPTQIPLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+PK Y+ PS+E+ L+ +V
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLSGIV 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
L + + + P +V + + G E +F +S+ GV+I+ N
Sbjct: 188 ELVRGWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQIHVN 230
>gi|71896183|ref|NP_001026765.1| protein artemis [Gallus gallus]
gi|71153324|sp|Q5QJC2.1|DCR1C_CHICK RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein; AltName: Full=SNM1 homolog C; Short=chSNM1C;
AltName: Full=SNM1-like protein
gi|47835016|gb|AAR27406.1| artemis [Gallus gallus]
Length = 714
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 161/340 (47%), Gaps = 68/340 (20%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG-----KRWSHG---PIYCSPLTARLVRMC 182
++D F Y +++ AYFL+H H DH GL +R +YCSP+T L
Sbjct: 14 LSIDRFDYDNLRA-RAYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL N Y I LE+ T I + ++VTLL A HCPG+ + F+ ++
Sbjct: 69 LLTNSKYAFWENHIVALEVETPTQISLVDETTGEKEDIEVTLLPAGHCPGSVMFLFQGEN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y PS+E+ L+ ++
Sbjct: 129 GTV-LYTGDFRLAKGEAARMELLHSGTSVKDIQSVYLDTTFCDPRFYHIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ +V + + G E +F+ +S+ LG+K++ N L F + PE+
Sbjct: 188 ELVRSWTTLSRYHVVWLNCKAAYGYEYLFINLSEELGIKVHVNK-----LDMFKNMPEIL 242
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAA-----------VLAFRP-TGWT 386
++ T T +H + + DY++ GN+ V++ +P T W
Sbjct: 243 YHITTD-RYTQIH-----ACRHPKDDDYVR--GNRLPCGITCQNGTPLHVISIKPSTMW- 293
Query: 387 YSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
G ++ + R + Y +S HSS++E+ +F+
Sbjct: 294 ----FGERIKKTNVIVRTGESTYRACFSFHSSYSEIMDFL 329
>gi|403284555|ref|XP_003933631.1| PREDICTED: 5' exonuclease Apollo [Saimiri boliviensis boliviensis]
Length = 593
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 121/250 (48%), Gaps = 35/250 (14%)
Query: 185 VNPSYIHPLELNTEHVI-------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
V+ +I LE+ HV+ + + VTL++ANHCPG+ + F G L+TGDFR
Sbjct: 125 VSKQWIQALEVGESHVLPLDEIGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 183
Query: 238 ASRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
+ M P L + +++ LYLD T CNP PS+++ + +V+L ++K P+ +
Sbjct: 184 YTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIK 239
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMS 356
+G YS+GKES+ + AL + + S RR L+ L+ + +H +
Sbjct: 240 IGLYSLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHM 296
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEH 416
+ + + NQ +A PT R + + I+ +PYS+H
Sbjct: 297 EICHSNMLHW-----NQTHPTIAILPTS--------------RKIRSSHPDIHVIPYSDH 337
Query: 417 SSFTELREFV 426
SS++ELR FV
Sbjct: 338 SSYSELRAFV 347
>gi|311705717|gb|ADQ01124.1| artemis [Pongo pygmaeus]
Length = 692
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 157/332 (47%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 GTV-LYTGDFRLAQGEAARMELLHSGGRIKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|197102870|ref|NP_001126451.1| protein artemis [Pongo abelii]
gi|71153327|sp|Q5R6Z9.1|DCR1C_PONAB RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein
gi|55731499|emb|CAH92461.1| hypothetical protein [Pongo abelii]
Length = 692
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 157/332 (47%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 GTV-LYTGDFRLAQGEAARMELLHSGGRIKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|407404385|gb|EKF29862.1| hypothetical protein MOQ_006337 [Trypanosoma cruzi marinkellei]
Length = 694
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 68/260 (26%)
Query: 144 CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA------------RLVRM--CL-----L 184
C +FL+HFH DHY G+ + W+HG IY S TA R+ RM C+ L
Sbjct: 46 CVLFFLSHFHSDHYNGITEGWNHGIIYASRGTANILCWRLGIPDSRVKRMDFCVTYTFSL 105
Query: 185 VNPSYIHPLELNTEH---VIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241
N + ++ N E D VTL+ A HCPG+ + FR LHTGDFR ++
Sbjct: 106 KNGALLYETAWNEEDWRCSDDFFSVTLVPAGHCPGSVMFLFRSPVFGTVLHTGDFRFTQE 165
Query: 242 ---------------------MQSYPLL--VNHRVNVLYLDTTYCNPKYKFPSKEDVLNY 278
M + P+L V +V+VL+LD T+C+ ++ FPS+ D L
Sbjct: 166 QPTSCLLPHVPRMPKFQKEIDMTTNPILNSVAGKVDVLFLDNTFCDERFNFPSRADSLRE 225
Query: 279 VVRLTKNCLKKQPKTL----------------------VVVGAYSIGKESVFLAISKALG 316
V + ++ +L V++G Y IGKE + L+I +
Sbjct: 226 VNEAILSMFREHTSSLQGVDKETSARGHEAKENAVSVAVLIGTYFIGKERIALSIQENF- 284
Query: 317 VKIYANASRRRVLQSFDWPE 336
+ + A S +V+ ++ PE
Sbjct: 285 LPLCAEDSTCKVVPTYVSPE 304
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 373 QYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
Q+ VL PTGWT + R + +T+ VPYSEHSSFTEL +FV
Sbjct: 441 QFDGVLCVEPTGWTRK--------VRRQILSKRVTLLHVPYSEHSSFTELVDFV 486
>gi|28316788|ref|NP_783614.1| protein artemis isoform 2 [Mus musculus]
gi|26331966|dbj|BAC29713.1| unnamed protein product [Mus musculus]
gi|26342607|dbj|BAC34960.1| unnamed protein product [Mus musculus]
Length = 603
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 155/331 (46%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + V VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E L ++
Sbjct: 129 GTV-LYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ + L F + P++
Sbjct: 188 ELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 243 HHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 302
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSSF+E+++F+
Sbjct: 303 VIV----RTGESSYRACFSFHSSFSEIKDFL 329
>gi|328767951|gb|EGF77999.1| hypothetical protein BATDEDRAFT_27168 [Batrachochytrium
dendrobatidis JAM81]
Length = 440
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 144/314 (45%), Gaps = 47/314 (14%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID--- 202
AY LTH H DH GL S +YC+P+TA+L++ + S + P+ N I
Sbjct: 32 AYLLTHAHADHMVGLVSLLSVNKVYCTPVTAKLLQTTM--GASNLFPIVFNKPFHIQLAN 89
Query: 203 --GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNH-RVNVLYLD 259
+++T L A+HCPG+A+I + D L TGDFR+ + + S ++ ++ +YLD
Sbjct: 90 NKHLQITFLPAHHCPGSAMI-LIIGDNGTILCTGDFRSEKRIDSLSFAIDRLSIDSVYLD 148
Query: 260 TTYCNPKY-KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVK 318
TT+ +P + P++ + N ++ + K V + + +IG E +++ +++ K
Sbjct: 149 TTFAHPNWMNLPTRLESANALIEVIKT---YSESVNVYLQSKTIGYEHLWVCLARHFNTK 205
Query: 319 IYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPY-------- 370
IY ASR+ + D C + ++ LH +S +F T + +
Sbjct: 206 IYVTASRKIKYELMDQ-------CKKADEEWLHECTVS--QFLTTDEQEARFFVDMCPKA 256
Query: 371 --GNQYAAVLAFRPTG--W------------TYSETVGNQLDLIRPLSRGNITIYGVPYS 414
+L P+ W TY + V D I R +++ + + YS
Sbjct: 257 ELSKTKGCLLNIHPSAMFWGRGSDSDAISHHTYWKRVSGFKDFIVQDLRDSMS-WRLLYS 315
Query: 415 EHSSFTELREFVQV 428
HSS +EL EFV V
Sbjct: 316 MHSSLSELIEFVAV 329
>gi|297597742|ref|NP_001044453.2| Os01g0783400 [Oryza sativa Japonica Group]
gi|255673755|dbj|BAF06367.2| Os01g0783400 [Oryza sativa Japonica Group]
Length = 217
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 86/170 (50%), Gaps = 28/170 (16%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR--WSHGPIYCSPLTARLVRMCLL-VNPS 188
+VD F GS AYFLTH H DH GLG W HGP+YCSP+TARL+ V+ S
Sbjct: 36 SVDKFSGGS----QAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPVTARLLPTRFPGVDAS 91
Query: 189 YIHPLE-----------LNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
+ PL +T + V VT + A HCPG+ + FR D C L+TGDFR
Sbjct: 92 LLRPLAPGASASLSLSSPSTGRAVS-VVVTAIPALHCPGSLMYLFR-GDLGCMLYTGDFR 149
Query: 238 ------ASRLMQSYPL--LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYV 279
+R + L L V+VLYLD TYC+P FP + V V
Sbjct: 150 WELRCKRARAAKKALLDALAGDTVDVLYLDNTYCHPSLSFPPRPIVAEQV 199
>gi|148675985|gb|EDL07932.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_e [Mus musculus]
Length = 617
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 155/331 (46%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 28 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKEL---- 82
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + V VTLL A HCPG+ + F+ +
Sbjct: 83 LLTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSN 142
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E L ++
Sbjct: 143 GTV-LYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGIL 201
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ + L F + P++
Sbjct: 202 ELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDIL 256
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 257 HHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 316
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSSF+E+++F+
Sbjct: 317 VIV----RTGESSYRACFSFHSSFSEIKDFL 343
>gi|158966682|ref|NP_001103684.1| protein artemis isoform 3 [Mus musculus]
gi|80474682|gb|AAI08936.1| Dclre1c protein [Mus musculus]
Length = 486
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 155/331 (46%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + V VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E L ++
Sbjct: 129 GTV-LYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ + L F + P++
Sbjct: 188 ELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 243 HHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 302
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSSF+E+++F+
Sbjct: 303 VIV----RTGESSYRACFSFHSSFSEIKDFL 329
>gi|356991244|ref|NP_001239351.1| protein artemis [Papio anubis]
gi|311705721|gb|ADQ01126.1| artemis [Papio anubis]
Length = 687
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 161/333 (48%), Gaps = 54/333 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVL--PMSSLKFE--TLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGN 393
+L T N T +H P + FE L + +++ +P T W G
Sbjct: 243 HHLTTDRN-TQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMW-----FGE 296
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ + R + Y +S HSS++E+++F+
Sbjct: 297 RSRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|398022602|ref|XP_003864463.1| hypothetical protein, conserved [Leishmania donovani]
gi|322502698|emb|CBZ37781.1| hypothetical protein, conserved [Leishmania donovani]
Length = 812
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 110/290 (37%), Gaps = 109/290 (37%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELN---------- 196
YFL+HFH DHY G+ RW G IYCS TA L + L V S++ P++L
Sbjct: 103 YFLSHFHSDHYAGITNRWHSGTIYCSRPTATLTQSQLGVPASWLFPMDLGQTYIFSLSTG 162
Query: 197 ------------------------------TEHVIDGV-KVTLLEANHCPGAALIHFRLQ 225
E +DG+ V L+ ANHCPGA + F
Sbjct: 163 VCLARVPETPHHPHVQSLLSPPAASSKGQAQEKTVDGMFVVRLIPANHCPGAVMFLFVSP 222
Query: 226 DGQCYLHTGDF-------------RASRLMQSY----PLLV------------------- 249
LHTGDF R+S Q+Y P L+
Sbjct: 223 VFGTVLHTGDFRFNGSRETWEQFVRSSNGRQTYVPPLPCLIKRGEEQHASTAAPPAPAYE 282
Query: 250 --------------NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL-------- 287
++VL LD T+C P YKFPS+ +V V+ + ++
Sbjct: 283 QFIADDEALRDVAQRQLLDVLLLDNTFCAPAYKFPSQWEVTQRVIEVLRSLFHRAACRAG 342
Query: 288 ----------KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRR 327
+Q + V++G Y+IGKE V LA+ A + + SR R
Sbjct: 343 VAVHSAGHPQHRQVRCAVLIGCYTIGKERVALALRDAFPLVRSSEQSRAR 392
>gi|308498135|ref|XP_003111254.1| hypothetical protein CRE_03853 [Caenorhabditis remanei]
gi|308240802|gb|EFO84754.1| hypothetical protein CRE_03853 [Caenorhabditis remanei]
Length = 616
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 33/326 (10%)
Query: 121 PFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
P+ K G+ VD F S + +FLTH H DH GL P+YCSP TA ++
Sbjct: 243 PYSKIEIGSSIAVDYFIKRSKR--PYHFLTHAHTDHTRGLDLTAGR-PVYCSPQTALILP 299
Query: 181 MCLLVNPSYIH-----PLELNTEHVIDGVKVTLLEANHCPGAALIHFR---LQD--GQCY 230
+ V+P +I PLEL H +G +VTLL+ANHCPG+ + F +++ G
Sbjct: 300 KIMGVDPKHILDGTICPLELMRPHRFEGFQVTLLDANHCPGSVMFLFEGYLIEEFAGGPV 359
Query: 231 LHTGDFRA-----SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKN 285
L TGDFRA +RL L R+ +YLD TY +FP+++ +L K
Sbjct: 360 LCTGDFRADKTFMNRLDGPLNFLSEFRLARIYLDNTYFKLDLEFPTRKSAQK---KLIKE 416
Query: 286 CLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG 345
K+ K + + + +G+ES+ S+ L I + + + + + T+
Sbjct: 417 IKAKRDKN-IFIPLHRLGRESLLEETSRILKEPIIIYKEKLEIAELLN--HFKKKIETRK 473
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG----NQLDLIRPL 401
++ + V+ + LK L + + + +FR S + + L R
Sbjct: 474 SNRKIEVVKK---EHNILKLVL--HSGEGVTIFSFRIPVSENSVIIDLSALHHLVGTRVA 528
Query: 402 SRGNITIYGVPYSEHSSFTELREFVQ 427
+ I + YS+HSS TE+ EF++
Sbjct: 529 TDEKREIIRISYSDHSSRTEILEFLK 554
>gi|311705713|gb|ADQ01122.1| artemis [Lophocebus albigena]
Length = 687
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 161/333 (48%), Gaps = 54/333 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVL--PMSSLKFE--TLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGN 393
+L T N T +H P + FE L + +++ +P T W G
Sbjct: 243 HHLTTDRN-TQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMW-----FGE 296
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ + R + Y +S HSS++E+++F+
Sbjct: 297 RSRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|311705705|gb|ADQ01118.1| artemis [Macaca fascicularis]
Length = 692
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 161/333 (48%), Gaps = 54/333 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVL--PMSSLKFE--TLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGN 393
+L T N T +H P + FE L + +++ +P T W G
Sbjct: 243 HHLTTDRN-TQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMW-----FGE 296
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ + R + Y +S HSS++E+++F+
Sbjct: 297 RSRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|119606658|gb|EAW86252.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_c [Homo sapiens]
Length = 692
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 156/332 (46%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIISIEIEAPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+
Sbjct: 129 GTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|302832754|ref|XP_002947941.1| hypothetical protein VOLCADRAFT_120549 [Volvox carteri f.
nagariensis]
gi|300266743|gb|EFJ50929.1| hypothetical protein VOLCADRAFT_120549 [Volvox carteri f.
nagariensis]
Length = 869
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K +PGT F VD F + + + CS YFLTHFH DH GL K + G IYCS +TARL+ +
Sbjct: 9 KWVPGTNFLVDGFAFKNPR-CSHYFLTHFHSDHTVGLNKSFDGGVIYCSHVTARLLVHDM 67
Query: 184 LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRL 224
+ P + PL + ++ GV+VT L+ANHCPG+ + F +
Sbjct: 68 GIKPQVVKPLAVGVAVMVQGVRVTPLDANHCPGSVMFLFEV 108
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
+ + C AA H LHTGD R R M+ P L RV+ L LDTTY PK+
Sbjct: 206 MAGGSQCGAAAATHN-------ILHTGDCRWQRWMRDQPGLAGVRVDTLLLDTTYAAPKH 258
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRR 327
P +++ + +V++ ++ L +P+T+ +V Y IGKE FL ++ L +++++ ++R
Sbjct: 259 TLPPQQEAIAMMVQVMRDALVAEPQTVFLVATYHIGKERAFLGAAQQLHARVWSSPAKRS 318
Query: 328 VLQSFDWP-ELSGNLCTQGNDTLLHV---------------LPMSSLKFETLKD-YLKPY 370
+L+ D P E L + ++H+ LP + K YL+ +
Sbjct: 319 LLRLLDLPAEHMALLVDDPREAMVHLTGWGLRPEDLRASCWLPRPGWGLKGAKRAYLERH 378
Query: 371 GNQYAAVLAFRPTG 384
+ + RPTG
Sbjct: 379 LGVWKQAVGIRPTG 392
>gi|324072804|ref|NP_001191279.1| protein artemis [Macaca mulatta]
gi|311705693|gb|ADQ01112.1| artemis [Macaca mulatta]
Length = 692
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 161/333 (48%), Gaps = 54/333 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVL--PMSSLKFE--TLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGN 393
+L T N T +H P + FE L + +++ +P T W G
Sbjct: 243 HHLTTDRN-TQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMW-----FGE 296
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ + R + Y +S HSS++E+++F+
Sbjct: 297 RSRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|312382373|gb|EFR27856.1| hypothetical protein AND_04963 [Anopheles darlingi]
Length = 280
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Query: 95 PPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHY 154
P K SN K +KIV CP YK I GT F VD FRYG I+G + YFLTHFH
Sbjct: 169 PRPSKAPKSNAKKEG---RKIV---CPKYKIIAGTNFAVDGFRYGDIEGVTHYFLTHFHA 222
Query: 155 DHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANH 213
DHY GL K ++ P+ SP+TARLV+ + V + +EL+ VID V++ L+AN
Sbjct: 223 DHYIGLKKSFAK-PLIMSPITARLVKTFINVPEEHYRLIELHRPIVIDRVEIIALDANQ 280
>gi|18490820|gb|AAH22254.1| DCLRE1C protein [Homo sapiens]
Length = 434
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 159/331 (48%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+
Sbjct: 129 GTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + +++ +P+ + E +
Sbjct: 243 RHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGER-SRKT 301
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++I R + Y +S HSS++E+++F+
Sbjct: 302 NVI---VRTGESSYRACFSFHSSYSEIKDFL 329
>gi|402467813|gb|EJW03056.1| hypothetical protein EDEG_02562, partial [Edhazardia aedis USNM
41457]
Length = 256
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 123 YKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS-HGPIYCSPLTARLVRM 181
+KK+P T +T+D F Y ++ C+ +FL+HFH DHY GL K+ S + IYCS TA LV M
Sbjct: 15 HKKVPNTNYTIDCF-YINVVDCTKHFLSHFHGDHYNGLTKKSSANKKIYCSETTANLVMM 73
Query: 182 CLLVNPSYIHPLEL-NTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
L V I L + E + + V L++ANHCPGA F ++ G YLH GDFRA
Sbjct: 74 RLRVLKENIVILNMYKWEKLEKDIFVYLIDANHCPGAVCFIFSVK-GVFYLHCGDFRA 130
>gi|311705699|gb|ADQ01115.1| artemis [Cercopithecus wolfi]
Length = 692
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 161/333 (48%), Gaps = 54/333 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 GTV-LYTGDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQP-KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P T+ + + G E +F +S+ LGV+++ N L F + P++
Sbjct: 188 ELVRSWITRSPYHTVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVL--PMSSLKFE--TLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGN 393
+L T N T +H P + FE L + +++ +P T W G
Sbjct: 243 HHLTTDRN-TQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMW-----FGE 296
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ + R + Y +S HSS++E+++F+
Sbjct: 297 RSRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|426240813|ref|XP_004014288.1| PREDICTED: protein artemis [Ovis aries]
Length = 710
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVCLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIVSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+PK Y+ PS+E+ L ++
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKYYQIPSREECLRGIM 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L +N + + P +V + + G E +F +S+ G++++ N L F + P++
Sbjct: 188 ELVRNWISRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVL--PMSSLKFE--TLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQ 394
+L T DT +H P + F+ L + ++ +P+ + E
Sbjct: 243 HHLTTD-RDTQIHACRHPKAEEYFQWNKLPCGITSKNKIPLHTISIKPSTMWFGERTRKT 301
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSS++E+++F+
Sbjct: 302 NIIV----RTGESSYRACFSFHSSYSEIKDFL 329
>gi|311705709|gb|ADQ01120.1| artemis [Colobus guereza]
Length = 689
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 158/332 (47%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIVSIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|311705707|gb|ADQ01119.1| artemis [Miopithecus talapoin]
Length = 692
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 160/333 (48%), Gaps = 54/333 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P V + + G E +F +S+ LGV+++ N L F + P++
Sbjct: 188 ELVRSWITRSPYHAVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVL--PMSSLKFE--TLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGN 393
+L T N T +H P + FE L + +++ +P T W G
Sbjct: 243 HHLTTDRN-TQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMW-----FGE 296
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ + R + Y +S HSS++E+++F+
Sbjct: 297 RSRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|339899168|ref|XP_001468662.2| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321398698|emb|CAM71749.2| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 812
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 111/290 (38%), Gaps = 109/290 (37%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELN---------- 196
YFL+HFH DHY G+ RW G IYCS TA L + L V S++ P++L
Sbjct: 103 YFLSHFHSDHYAGITNRWHSGTIYCSRPTATLTQSQLGVPASWLFPMDLGQTYIFSLSTG 162
Query: 197 ------------------------------TEHVIDGV-KVTLLEANHCPGAALIHFRLQ 225
E +DG+ V L+ ANHCPGA + F
Sbjct: 163 VCLARVPETPHHPHVQALLSPPAASSKGQAQEKTVDGMFVVRLIPANHCPGAVMFLFVSP 222
Query: 226 DGQCYLHTGDF-------------RASRLMQSY--PLL---------------------- 248
LHTGDF R+S Q+Y PL
Sbjct: 223 VFGTVLHTGDFRFNGSRETWEQFVRSSNGRQTYVPPLSCLIKRGEEQHASTAAPPAPAYE 282
Query: 249 -----------VNHR--VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL-------- 287
V R ++VL LD T+C P YKFPS+ +V V+ + ++
Sbjct: 283 QFIADDEALRDVAQRQLLDVLLLDNTFCAPAYKFPSQWEVTQRVIEVLRSLFHRAACRAG 342
Query: 288 ----------KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRR 327
+Q + V++G Y+IGKE V LA+ A + + SR R
Sbjct: 343 VAVHSAGHPQHRQVRCAVLIGCYTIGKERVALALRDAFPLVRSSEQSRAR 392
>gi|402469785|gb|EJW04420.1| hypothetical protein EDEG_04229, partial [Edhazardia aedis USNM
41457]
Length = 259
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 123 YKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS-HGPIYCSPLTARLVRM 181
+KK+P T +T+D F Y ++ C+ +FL+HFH DHY GL K+ S + IYCS TA LV M
Sbjct: 18 HKKVPNTNYTIDCF-YINVVDCTKHFLSHFHGDHYNGLTKKSSANKKIYCSETTANLVIM 76
Query: 182 CLLVNPSYIHPLEL-NTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
L V I L + E + + V L++ANHCPGA F ++ G YLH GDFRA
Sbjct: 77 RLRVLKENIVILNMYKWEKLEKDIFVYLIDANHCPGAVCFIFSVK-GVFYLHCGDFRA 133
>gi|357115401|ref|XP_003559477.1| PREDICTED: uncharacterized protein LOC100844720 [Brachypodium
distachyon]
Length = 662
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 141/331 (42%), Gaps = 42/331 (12%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL-LVN 186
G P VD + S FLTH H DH G+ S +Y S LT +VR +
Sbjct: 8 GLPIAVDTWTPASALK-RHRFLTHAHRDHLTGVTTTSSGAAVYASRLTILIVRHIFPQLG 66
Query: 187 PSYIHPLELNTEHVIDGVK----VTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS-RL 241
P +EL T ++ K VT +ANHCPGA + F G LHTGD R +
Sbjct: 67 PDVFVEMELGTPVLVQDPKGDFTVTAFDANHCPGAVMFLFEGTFGN-VLHTGDCRLTPDC 125
Query: 242 MQSYPL-LVNH------------RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
+Q PL +N R++ L+LD T+ +FP+KE + V+ NC+
Sbjct: 126 IQGLPLRYINAKGSGSSQVPPSCRIDYLFLDCTFARCPLRFPTKEASIRQVI----NCIW 181
Query: 289 KQPKTLVV-VGAYSIGKESVFLAISKALGVKIYANASRR----RVLQSFDWPELSGNLCT 343
+ P V + + +G+E + + +S+A G KIY + + L F + + T
Sbjct: 182 EHPNAPTVYLVSDMLGQEEILIEVSRAFGSKIYVDKDKNSECYHTLSLF-----APEIVT 236
Query: 344 QGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-----SETVGNQ-LDL 397
Q + V+ L ++ Q L R + Y SE++ Q L L
Sbjct: 237 QDAASRFQVIAFPRLSEWAVEMLTLARAKQQPEPLIIRSSSQWYAHYEQSESLPKQKLSL 296
Query: 398 IRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
P+ R ++ V S HSS EL + V++
Sbjct: 297 TEPM-RDGFGVWHVCLSMHSSREELDQAVEL 326
>gi|410963228|ref|XP_003988167.1| PREDICTED: protein artemis isoform 1 [Felis catus]
Length = 690
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 156/333 (46%), Gaps = 54/333 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL NP Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTNPRYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+PK Y+ PS+E+ L+ ++
Sbjct: 129 GTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ G++++ + L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTHLSEEFGIQVHVDK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLK----PYGNQYAAVLAFRPTGWTYSET-VGN 393
+L T N T +H + + ++Y P GN + S G
Sbjct: 243 HHLTTDRN-TQIH-----ACRHPKAEEYFHWNKLPCGNISKNTIPLHTISIKPSTMWFGE 296
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ + R + Y +S HSS++E+++F+
Sbjct: 297 RTRKTNVIVRTGESSYRACFSFHSSYSEVKDFL 329
>gi|117306469|gb|AAI25278.1| Dclre1b protein [Mus musculus]
Length = 459
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 28/226 (12%)
Query: 202 DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYP-LLVNHRVNVLYLDT 260
+ + VTL++ANHCPG+ + F G L+TGDFR + M P L++ +++ LYLD
Sbjct: 6 ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRYTPSMLKEPALILGKQIHTLYLDN 64
Query: 261 TYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIY 320
T CNP PS+++ +V+L +++ P+ + +G YS+GKES+ ++ +
Sbjct: 65 TNCNPALVLPSRQEATQQIVQL----IRQFPQHNIKIGLYSLGKESLLEQLALEFRTWVV 120
Query: 321 ANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAF 380
+ R ++Q L+ + +H + + + + + NQ +A
Sbjct: 121 LSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHTEICHSAMLQW-----NQSHPTIAI 172
Query: 381 RPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
PT R + + +IY VPYS+HSS++ELR FV
Sbjct: 173 FPTS--------------RKVRSPHPSIYTVPYSDHSSYSELRAFV 204
>gi|190408363|gb|EDV11628.1| interstrand crosslink repair protein [Saccharomyces cerevisiae
RM11-1a]
Length = 371
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 140/320 (43%), Gaps = 98/320 (30%)
Query: 200 VIDGVKVTLLEANHCPGAALIHFRLQDGQCY-------LHTGDFRASRLM-----QSYPL 247
+ D + V L+ANHCPGA ++ F+ Y LHTGDFR++ M +
Sbjct: 15 ITDTISVVTLDANHCPGAIIMLFQEFLANSYDKPIRQILHTGDFRSNAKMIETIQKWLAE 74
Query: 248 LVNHRVNVLYLDTTYCNPKYKFPSK----EDVLNYVVRLTKNCLKK-------------- 289
N ++ +YLDTTY Y FPS+ E V ++ +RL K+ K
Sbjct: 75 TANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRLIKHGKNKTFGDSQRNLFHFQR 134
Query: 290 -------QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRR------VLQSFD--- 333
+ + L +VG Y+IGKE + + I + L K++ + + VLQ+ +
Sbjct: 135 KKTLTTHRYRVLFLVGTYTIGKEKLAIKICEFLKTKLFVMPNSVKFSMMLTVLQNNENQN 194
Query: 334 --WPE--LSGNLCTQGNDTLLHVLPMSSLKF-ETLKDYLKP-------YGNQYAAVLAFR 381
W E L+ NL +++ +H++P+ LK ET++ YLK Y V+ F
Sbjct: 195 DMWDESLLTSNL----HESSVHLVPIRVLKSQETIEAYLKSLKELETDYVKDIEDVVGFI 250
Query: 382 PTGWTYS------------------------ETVGNQLD-----------LIRPLSRGN- 405
PTGW+++ E + N D ++R + N
Sbjct: 251 PTGWSHNFGLKYQKKNDDDENEMSGNTEYCLELMKNDRDNDDENGFEISSILRQYKKYNK 310
Query: 406 ITIYGVPYSEHSSFTELREF 425
++ VPYSEHSSF +L +F
Sbjct: 311 FQVFNVPYSEHSSFNDLVKF 330
>gi|449682246|ref|XP_002170873.2| PREDICTED: uncharacterized protein LOC100203671 [Hydra
magnipapillata]
Length = 417
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYC 171
+KK + CPFYKKI G +VDAF YG I GC Y L+HFH DHY GL K++S G +YC
Sbjct: 250 MKKNSRKDCPFYKKIFGASISVDAFSYGEIPGCKYYLLSHFHSDHYKGLSKKFS-GKVYC 308
Query: 172 SPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANH 213
S +TA LV L V + L +N + V +TLL+AN
Sbjct: 309 SKITANLVISQLHVFQDNVVVLPMNQLIRLGDVHLTLLDANQ 350
>gi|15029751|gb|AAH11094.1| Dclre1b protein [Mus musculus]
gi|74210373|dbj|BAE23379.1| unnamed protein product [Mus musculus]
Length = 452
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 28/224 (12%)
Query: 204 VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYP-LLVNHRVNVLYLDTTY 262
+ VTL++ANHCPG+ + F G L+TGDFR + M P L++ +++ LYLD T
Sbjct: 1 MTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRYTPSMLKEPALILGKQIHTLYLDNTN 59
Query: 263 CNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
CNP PS+++ +V+L +++ P+ + +G YS+GKES+ ++ + +
Sbjct: 60 CNPALVLPSRQEATQQIVQL----IRQFPQHNIKIGLYSLGKESLLEQLALEFRTWVVLS 115
Query: 323 ASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP 382
R ++Q L+ + +H + + + + + NQ +A P
Sbjct: 116 PQRLELVQLLG---LADVFTVEEEAGRIHAVDHTEICHSAMLQW-----NQSHPTIAIFP 167
Query: 383 TGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
T R + + +IY VPYS+HSS++ELR FV
Sbjct: 168 TS--------------RKVRSPHPSIYTVPYSDHSSYSELRAFV 197
>gi|83314848|ref|XP_730538.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490291|gb|EAA22103.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 773
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
Query: 115 IVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPL 174
I+D+ P+ KK TP D + + YFLTHFH DHY + K ++ I+ S +
Sbjct: 16 IIDK-FPYIKKKSVTPGECDEKK----EITKVYFLTHFHADHYMNINKNFNEN-IFSSTI 69
Query: 175 TARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTG 234
T +L+ + V+ Y+H L++N + + ++ L++ANHCPG+ +I+F +G +HTG
Sbjct: 70 TKKLLINIIGVDEKYVHNLKVNKNYYLFNFEIILIDANHCPGSVIIYFEFSNGTKIIHTG 129
Query: 235 DFRASRL 241
DFR S +
Sbjct: 130 DFRYSNV 136
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 22/151 (14%)
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIY-ANASRRRVLQSFDWPELSGNLCTQGN 346
+K+ KTL + G Y++GKE V+L++S+A +KIY N ++ + S+ + N T+
Sbjct: 532 RKRKKTLFMFGTYNLGKEKVYLSVSEACNMKIYFRNPKKKIIFNSYICNKDMLNRITENK 591
Query: 347 -DTLLHVLPMS---------SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD 396
+ +H++ ++ K +L D +++ + PTGW +
Sbjct: 592 LEAEIHIIDINYSYIFPKIEKNKLRSLID--AEMEDEFDSFYYIIPTGWVKNYYF----- 644
Query: 397 LIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ N++++ +PYSEHS+ ELREFV+
Sbjct: 645 ----YEKNNMSVFLIPYSEHSNLDELREFVK 671
>gi|119606655|gb|EAW86249.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_b [Homo sapiens]
Length = 434
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 158/331 (47%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWKKRIISIEIEAPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+
Sbjct: 129 GTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + +++ +P+ + E +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGER-SRKT 301
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++I R + Y +S HSS++E+++F+
Sbjct: 302 NVI---VRTGESSYRACFSFHSSYSEIKDFL 329
>gi|301789021|ref|XP_002929927.1| PREDICTED: protein artemis-like [Ailuropoda melanoleuca]
gi|281339274|gb|EFB14858.1| hypothetical protein PANDA_020236 [Ailuropoda melanoleuca]
Length = 692
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 37/223 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+PK Y+ PS+E+ L+ +V
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLSGIV 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
L ++ + + P +V + + G E +F +S+ GV+I+ +
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQIHVD 230
>gi|26351057|dbj|BAC39165.1| unnamed protein product [Mus musculus]
Length = 486
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 123/302 (40%), Gaps = 77/302 (25%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FLTH H DH GL W+ P+YCSP+T + L
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITG----LPLAS 60
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSY 245
+P+ GDFR + M
Sbjct: 61 SPA---------------------------------------------GDFRYTPSMLKE 75
Query: 246 P-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK 304
P L++ +++ LYLD T CNP PS+++ +V+L +++ P+ + +G YS+GK
Sbjct: 76 PALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQL----IRQFPQHNIKIGLYSLGK 131
Query: 305 ESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLK 364
ES+ ++ + + R ++Q L+ + +H + + + +
Sbjct: 132 ESLLEQLALEFRTWVVLSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHTEICHSAML 188
Query: 365 DYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELRE 424
+ NQ +A PT R + + +IY VPYS+HSS++ELR
Sbjct: 189 QW-----NQSHPTIAIFPTS--------------RKVRSPHPSIYTVPYSDHSSYSELRA 229
Query: 425 FV 426
FV
Sbjct: 230 FV 231
>gi|405958776|gb|EKC24868.1| Protein artemis [Crassostrea gigas]
Length = 814
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 143/329 (43%), Gaps = 51/329 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK-----RWSHGP---IYCSPLTA------ 176
++D F ++K + YFL+H H DH GL R S +YCS +T
Sbjct: 14 ISLDRFDGLNLKS-TVYFLSHCHCDHMEGLASAEFLDRLSSRNDIFLYCSEVTKILLMEK 72
Query: 177 -----RLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYL 231
+ V++ + PS I P+ + V VTL+ A+HCPG+ + F DG L
Sbjct: 73 LAKLEKFVKVLKVGEPSCI-PIPAQNSAKTEKVTVTLIHASHCPGSVMFLFEGYDGTA-L 130
Query: 232 HTGDFR-ASRLMQSYPLL-VNHRVN---VLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKN 285
+TGDFR S +Q+ P L V+ RV LY+DTT+C+P + PS+ ++ V L
Sbjct: 131 YTGDFRWESDQIQNVPALHVDQRVKPLASLYVDTTFCHPNSFLIPSRRTIIKVVCDLVTE 190
Query: 286 CLKKQPKTLV-VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQ 344
K +V + G E + +++ LG K++ + + EL G +
Sbjct: 191 WTSKGSNHVVHFTPRANYGHEPLLKEVAQTLGCKVHVKKDKENIYNQMS--ELQGVFTSD 248
Query: 345 GNDTLLHVLPMSSLKFETLKDYLKP-------YGNQYAAVLAFRPTGWTYSETVGNQLDL 397
T LH M K Y KP GN V+ P+ ++++V
Sbjct: 249 STATPLHACGM--------KVYGKPPRLPCNLRGN--LKVMVILPSTMFFTQSVHVSERE 298
Query: 398 IRPLSRGNITIYGVPYSEHSSFTELREFV 426
I RG +Y V Y HSS E+R+ V
Sbjct: 299 IVLQDRG---MYRVCYCFHSSMQEVRDLV 324
>gi|154152069|ref|NP_001093847.1| protein artemis [Bos taurus]
gi|151554853|gb|AAI48007.1| DCLRE1C protein [Bos taurus]
gi|296481454|tpg|DAA23569.1| TPA: DNA cross-link repair 1C [Bos taurus]
Length = 710
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 160/332 (48%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVCLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIVSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+CNPK Y+ PS+E+ L ++
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCNPKYYQIPSREECLRGIM 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ G++++ + L F + P++
Sbjct: 188 ELVRSWISRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVDK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVL--PMSSLKFE--TLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQ 394
+L T DT +H P + F+ L + ++ +P+ + E +
Sbjct: 243 HHLTTD-RDTQIHACRHPKAEEYFQWSKLPCGITSKNRIPLHTISIKPSTMWFGERT-RK 300
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++I R + Y +S HSS++E+++F+
Sbjct: 301 TNIIM---RTGESSYRACFSFHSSYSEIKDFL 329
>gi|22023549|gb|AAM89119.1|AF387731_1 SNM1-like protein [Mus musculus]
Length = 705
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 153/331 (46%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGP----IYCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR +YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + V VTLL HCP + + F+ +
Sbjct: 69 LLTSPKYRFWENRIITIEIETPTQISLVDEASGEQEQVGVTLLPPGHCPRSXVFLFQGSN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E L ++
Sbjct: 129 GT-VLYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ + L F + P++
Sbjct: 188 ELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 243 HHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 302
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSSF+E+++F+
Sbjct: 303 VIV----RTGESSYRACFSFHSSFSEIKDFL 329
>gi|440906804|gb|ELR57026.1| Protein artemis [Bos grunniens mutus]
Length = 710
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 160/332 (48%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVCLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRILSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+CNPK Y+ PS+E+ L ++
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCNPKYYQIPSREECLRGIM 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ G++++ + L F + P++
Sbjct: 188 ELVRSWISRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVDK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVL--PMSSLKFE--TLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQ 394
+L T DT +H P + F+ L + ++ +P+ + E +
Sbjct: 243 HHLTTD-RDTQIHACRHPKAEEYFQWSKLPCGITSKNRIPLHTISIKPSTMWFGERT-RK 300
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++I R + Y +S HSS++E+++F+
Sbjct: 301 TNIIM---RTGESSYRACFSFHSSYSEIKDFL 329
>gi|221059697|ref|XP_002260494.1| DNA repair metallo-beta-lactamase [Plasmodium knowlesi strain H]
gi|193810567|emb|CAQ41761.1| DNA repair metallo-beta-lactamase, putative [Plasmodium knowlesi
strain H]
Length = 769
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKV 206
YFLTHFH DHY + K + H ++ S +T +L+ + VN YIH L++N + + +V
Sbjct: 44 YFLTHFHADHYTNINK-YFHENVFSSTITKKLLTNIIGVNEKYIHNLKINKNYHVFNFEV 102
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241
++ANHCPG+ +I+F +G +HTGDFR S +
Sbjct: 103 IFIDANHCPGSVIIYFEFANGTKIIHTGDFRYSNV 137
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKI-YANASRRRVLQSFDWPELSGNLCTQGN-DT 348
KTL + G Y++GKE ++L++S+A +KI + N ++ ++QSF + N T +
Sbjct: 535 KKTLFMFGTYNLGKEKIYLSVSEACNMKIHFRNEKKKTIIQSFLHNKNILNRITDNKLEA 594
Query: 349 LLHVLPMS---------SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIR 399
+H++ ++ KF+ L D + ++ + PTGW +
Sbjct: 595 QIHIVDINYSYIFPKIEKEKFKNLID--EEIEKEFDSFYYIIPTGWVKKYSF-------- 644
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFVQ 427
I+I+ +PYSEHS+ +EL FV+
Sbjct: 645 -YQNKEISIFLIPYSEHSNLSELENFVK 671
>gi|10434517|dbj|BAB14284.1| unnamed protein product [Homo sapiens]
Length = 443
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 28/224 (12%)
Query: 204 VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYP-LLVNHRVNVLYLDTTY 262
+ VTLL+ANHCPG+ + F G L+TGDFR + M P L + +++ LYLD T
Sbjct: 1 MTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTN 59
Query: 263 CNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
CNP PS+++ + +V+L ++K P+ + +G YS+GKES+ + AL + +
Sbjct: 60 CNPALVLPSRQEAAHQIVQL----IRKHPQHNIKIGLYSLGKESLLEQL--ALEFQTWVV 113
Query: 323 ASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP 382
S RR L+ L+ + +H + ET + + NQ +A P
Sbjct: 114 LSPRR-LELVQLLGLADVFTVEEKAGRIHAVD----HMETCHSNMLRW-NQTHPTIAILP 167
Query: 383 TGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
T R + + I+ +PYS+HSS++ELR FV
Sbjct: 168 TS--------------RKIHSSHPDIHVIPYSDHSSYSELRAFV 197
>gi|311705719|gb|ADQ01125.1| artemis [Trachypithecus francoisi]
Length = 681
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 157/332 (47%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRTTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|194227144|ref|XP_001498525.2| PREDICTED: protein artemis isoform 1 [Equus caballus]
Length = 693
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 37/223 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+PK Y+ PS+E+ L+ +V
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLSGIV 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
L ++ + + P +V + + G E +F +S+ GV+++ +
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVD 230
>gi|301611547|ref|XP_002935298.1| PREDICTED: protein artemis-like [Xenopus (Silurana) tropicalis]
Length = 697
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 56/334 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGL-----GKRWSHG---PIYCSPLTARLVRMC 182
++D F ++ AYFL+H H DH GL +R + +YCSP+T L
Sbjct: 14 ISIDRFDRENLSA-RAYFLSHCHKDHMKGLRAPFLKRRLQNSLKVHLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL NP Y + +E++T I + V VTLL A HCPG+ + F+
Sbjct: 69 LLTNPKYAFWENRMISIEIDTPTQISLVDEATGYKEDVVVTLLPAGHCPGSVMFLFQGNS 128
Query: 227 GQCYLHTGDFRASR--LMQSYPLLVNHRVN---VLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + + L +RV +YLDTT+C+PK Y+ PS+E+ L+ ++
Sbjct: 129 GTV-LYTGDFRLAKGEVARMELLHSGNRVKDIESVYLDTTFCDPKYYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + P +V + + G E +F +S+ G K++ N L F + PE+
Sbjct: 188 ELVRSWITLSPFHVVWLNCKAAYGYEYLFTNLSEEFGAKVHVNK-----LDMFKNMPEIL 242
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYG-----NQYAAVLAFRP-TGWTYSETVG 392
++ T T +H + E + P G V++ +P T W G
Sbjct: 243 SHITTDRR-TQIHAC-RHPVNEEFTRANRMPCGMFSDDGIPLHVISIKPSTIW-----FG 295
Query: 393 NQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ + R + Y +S HSS++E+++F+
Sbjct: 296 ERTRRTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|73949006|ref|XP_544251.2| PREDICTED: protein artemis isoform 1 [Canis lupus familiaris]
Length = 693
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 156/332 (46%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPALKRRLECSLKVRLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPRYRFWEKRIISIEIETPTQIPLVDEASGEKEDIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+PK Y+ PS+E+ L +
Sbjct: 129 G-TVLYTGDFRMAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLRGIS 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ GV+I+ + L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQIHVDK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTLLHVL--PMSSLKFETLKDYLKPYGNQYAAV--LAFRPTGWTYSETVGNQ 394
+L T N T +H P + F K + ++ +P+ + E
Sbjct: 243 HHLTTDRN-TQIHACRHPKAEEYFHWNKLPCGAISKNRIPLHTISIKPSTMWFGERTRKT 301
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSS++E+++F+
Sbjct: 302 NVIV----RTGESSYRACFSFHSSYSEIKDFL 329
>gi|156100567|ref|XP_001616011.1| DNA repair metallo-beta-lactamase protein [Plasmodium vivax Sal-1]
gi|148804885|gb|EDL46284.1| DNA repair metallo-beta-lactamase protein, putative [Plasmodium
vivax]
Length = 769
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKV 206
YFLTHFH DHY + K + H ++ S +T +L+ + VN YIH L++N + + ++
Sbjct: 45 YFLTHFHADHYTNINK-YFHENVFSSTITKKLLTNIIGVNEKYIHNLKINKNYHLFNFEI 103
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241
L+ANHCPG+ +I+F +G +HTGDFR S +
Sbjct: 104 IFLDANHCPGSVIIYFEFANGTKIIHTGDFRYSNV 138
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKI-YANASRRRVLQSFDWPELSGNLCTQGN-DTL 349
KTL + G Y++GKE ++L++S+A +KI + N ++ +++SF + N T +
Sbjct: 536 KTLFMFGTYNLGKEKIYLSVSEACNMKIHFRNEKKKIIIESFLHNKSMLNRITDNKLEAQ 595
Query: 350 LHVLPMS---------SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRP 400
+H++ ++ KF+ L D + ++ + PTGW +
Sbjct: 596 IHIVDINYSYIFPRIEKNKFKNLID--EEIEKEFDSFYYIIPTGWVKKYSF--------- 644
Query: 401 LSRGNITIYGVPYSEHSSFTELREFVQ 427
+ I+I+ +PYSEHS+ EL FV+
Sbjct: 645 YQKNEISIFLIPYSEHSNLEELESFVK 671
>gi|389585475|dbj|GAB68206.1| DNA repair metallo-beta-lactamase protein [Plasmodium cynomolgi
strain B]
Length = 572
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKV 206
YFLTHFH DHY + K + H ++ S +T +L+ + VN YIH L++N + + ++
Sbjct: 45 YFLTHFHADHYSNINK-YFHENVFSSTITKKLLTNIIGVNEKYIHNLKINKNYHLFNFEI 103
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241
++ANHCPG+ +I+F +G +HTGDFR S +
Sbjct: 104 IFIDANHCPGSVIIYFEFANGTKIIHTGDFRYSNV 138
>gi|148675981|gb|EDL07928.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Mus musculus]
Length = 699
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 150/331 (45%), Gaps = 56/331 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + V VTLL A HCPG+
Sbjct: 69 LLTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSG-------S 121
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E L ++
Sbjct: 122 NGTVLYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGIL 181
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ + L F + P++
Sbjct: 182 ELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDIL 236
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 237 HHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 296
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSSF+E+++F+
Sbjct: 297 VIV----RTGESSYRACFSFHSSFSEIKDFL 323
>gi|407851008|gb|EKG05145.1| hypothetical protein TCSYLVIO_003789 [Trypanosoma cruzi]
Length = 681
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 67/234 (28%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI----- 201
+FL+HFH DHY G+ W+HG IY S TA ++ L + S + ++ +
Sbjct: 49 FFLSHFHSDHYNGITGGWNHGTIYASRGTANILCWRLGIPESRVKRMDFCVTYTFSLKNG 108
Query: 202 -----------------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL--- 241
+ VTL+ A HCPG+ + FR LHTGDFR +R
Sbjct: 109 ALLYETTWEEEEWRCSDEFFSVTLIPAGHCPGSVMFLFRSPVFGTVLHTGDFRFTREQPN 168
Query: 242 ------------------MQSYPLL--VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVR 281
M + P+L + +V+VL+LD T+C+ ++ FPS+ D L V +
Sbjct: 169 SSLLPHVPRMPHFQKEIDMMANPVLKSIAGKVDVLFLDNTFCDERFNFPSRADSLREVNQ 228
Query: 282 LTKNCLKKQPKTL----------------------VVVGAYSIGKESVFLAISK 313
+ + +L V++G Y IGKE + ++I +
Sbjct: 229 AILSVFRDHTSSLQGVTQEMTARGHEAKEHAISVAVIIGTYFIGKERIAVSIQE 282
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 373 QYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
Q+ VL P+GWT R + +T+ VPYSEHSSFTEL +FV
Sbjct: 441 QFDGVLCVEPSGWTRKAR--------RQILSKRVTLLHVPYSEHSSFTELVDFV 486
>gi|110759553|ref|XP_001122361.1| PREDICTED: protein artemis-like isoform 1 [Apis mellifera]
gi|328781177|ref|XP_003249933.1| PREDICTED: protein artemis-like isoform 2 [Apis mellifera]
Length = 392
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 152/335 (45%), Gaps = 49/335 (14%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW------SHGPIYCSPLTAR 177
K+IPG +VD F G+ S +FL+H H DH GL + + +YCSP+T
Sbjct: 9 KEIPG--ISVDRFD-GANLTSSIFFLSHCHSDHMHGLSDMFFEHIDEYNKYLYCSPITKA 65
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDG---------VKVTLLEANHCPGAALIHFRLQDGQ 228
L+ S + +++N+ VI+ + VT + A HCPG+ + F ++
Sbjct: 66 LLENRFKFKTSCVKEIDINSPTVIEYSIKNEDKILICVTCIPAGHCPGSVMFLFE-KNNI 124
Query: 229 CYLHTGDFRAS-------RLMQSY--PLLVNHRVNVLYLDTTYCNPKY-KFPSKEDVLNY 278
L+TGDFR + + + Y L+ +YLDTT+ + + FP++++ +
Sbjct: 125 SILYTGDFRINPKDFPKLKSLHYYNDSKLIPKSFTKIYLDTTFLSTDFSSFPTRQESVFK 184
Query: 279 VVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPE 336
+ + KN + K P+ +V++ ++ G E +F+ +SK L +KI+ R V +++ +
Sbjct: 185 MYEVIKNWISKDPRNVVILECSAMYGSEFLFVELSKMLNMKIHV---RSDVFETYCRIAQ 241
Query: 337 LSGNLCTQGNDTLLHV----LPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG 392
LS + T +H + +S L + N + W +T
Sbjct: 242 LSCYVTNDPYSTSIHACKKKISVSGLHCRS------DVSNMNIMTVIPSVMKWRKKDTT- 294
Query: 393 NQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+I + + V YS HSSF EL+ F+Q
Sbjct: 295 ----IIGEWDKVKERTFNVCYSTHSSFNELKAFIQ 325
>gi|307193937|gb|EFN76517.1| Artemis protein [Harpegnathos saltator]
Length = 387
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 157/336 (46%), Gaps = 47/336 (13%)
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR-WSHGP-----IYCSPLT 175
F ++IPG +VD F G SAYFL+H H DH GL ++H +YCS ++
Sbjct: 7 FVEEIPG--ISVDRFD-GENLSSSAYFLSHCHTDHMIGLNHEFFAHLQQFDKYLYCSSIS 63
Query: 176 ARLVRM-CLLVNPS-YIHPLELNTEHVI---------DGVKVTLLEANHCPGAALIHFRL 224
+++ C P+ Y+ +E++ + D + VT + A HCPG+ + F
Sbjct: 64 KQILNANC----PNMYVKDIEVDKRVAVEYKNGSGETDILFVTCISAGHCPGSVMFLFE- 118
Query: 225 QDGQCYLHTGDFRASRL---------MQSYPLLVNHRVNVLYLDTTYCNPKYK-FPSKED 274
+D + L+TGDFR + L +S ++ ++ +YLDTT+ NP + FP++++
Sbjct: 119 RDDKLILYTGDFRINSLDLPKLRSLHFRSGSKVLPKKLTKVYLDTTFFNPNFATFPTRKE 178
Query: 275 VLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF- 332
++ + + KN L K P+ V++ ++ G E +F+ +SK L + ++ R V +
Sbjct: 179 SVSMICNIIKNWLTKSPRHAVILECSALYGSEFLFMELSKFLNIPVHV---RNIVFPNLC 235
Query: 333 DWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGN-QYAAVLAFRPTGWTYSETV 391
+L ++ T T +H K E +K + VL + + +
Sbjct: 236 RISDLRPHVTTDPYATPIHA---CMGKMECGLGLMKCRSDIPQENVLTIVASAYKWE--- 289
Query: 392 GNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
G +I + + YS HSSF EL+ F+Q
Sbjct: 290 GKDTSVIGAWDSAKERTFNICYSTHSSFEELQAFIQ 325
>gi|353249037|emb|CCA77455.1| related to PSO2-DNA repair protein, partial [Piriformospora indica
DSM 11827]
Length = 217
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 27/157 (17%)
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVL--QSFDWPELSGNLCTQGNDTL-- 349
LVV+G Y++GKE + AI++AL IY +RR QS + PEL L G+D L
Sbjct: 9 LVVLGTYTVGKERIVKAIARALNTSIYCEPRKRRFFECQSSEDPEL---LEMLGDDPLKC 65
Query: 350 -LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL------------- 395
+HV+ + + + L YL+ + ++ VL +PTGWTYS G +
Sbjct: 66 DVHVISLGDVTSDALPLYLEKWKGRWEKVLGIKPTGWTYSPPAGTDMANLQVILQRDQRK 125
Query: 396 ----DLIRPL--SRGNITIYGVPYSEHSSFTELREFV 426
+RP+ S N+ +YGVPYSEHSSF EL F
Sbjct: 126 TYNWASLRPMRNSTPNVMLYGVPYSEHSSFFELTCFA 162
>gi|449459252|ref|XP_004147360.1| PREDICTED: uncharacterized protein LOC101217143 [Cucumis sativus]
Length = 624
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 153/322 (47%), Gaps = 30/322 (9%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV-RMCLLVN 186
G PF+VD + S K +FLTH H DH G+ +S PIY + LT +V + ++
Sbjct: 8 GLPFSVDTWSPSSKKK-RHHFLTHAHRDHTTGIVPHFSF-PIYSTFLTKSIVLQQFPQLH 65
Query: 187 PSYIHPLELNTEHVI---DGV-KVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS-RL 241
S +E+ V+ DG VT+ +A+HCPGA + F G LHTGD R +
Sbjct: 66 DSLFVCIEVGQSLVVKDPDGAFTVTVFDAHHCPGAVMFLFEGYFGNV-LHTGDCRLTPEC 124
Query: 242 MQSYPLLVNH--------RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+Q+ P ++++++LD T+ +FPS+ ++ ++ NC+ K P
Sbjct: 125 LQNLPEKYRGKSGKEPRCKLDLIFLDCTFGRFFQQFPSRHSSIHQII----NCIWKHPDA 180
Query: 294 -LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
LV + +G+E + +S+ G KI+A+ S++ ++ + ++ ++ TQ + H+
Sbjct: 181 PLVYLICNLLGQEDILQQVSQTFGSKIFADESKKAGYKALEL--INPDILTQDPSSRFHL 238
Query: 353 LPMSSLKFETLKDYLKPYGNQY-AAVLAFRP-TGWTYSETVG----NQLDLIRPLSRGNI 406
L +T + L + + L RP T W E V ++ +I +
Sbjct: 239 LDGFPKLCQTARTLLADAQTNFLSEPLVIRPSTQWYVREEVSEIWNSRKQIISEAIKDQH 298
Query: 407 TIYGVPYSEHSSFTELREFVQV 428
I+ V YS HSS EL +Q+
Sbjct: 299 GIWHVCYSMHSSKEELEWALQI 320
>gi|71654845|ref|XP_816034.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881135|gb|EAN94183.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 715
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 67/234 (28%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI----- 201
+FL+HFH DHY G+ + WSHG IY S TA ++ L + S + ++ +
Sbjct: 83 FFLSHFHSDHYNGVTEGWSHGTIYASRGTANILCWRLGIPESRVKRMDFCVTYTFSLKNG 142
Query: 202 -----------------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR------- 237
+ VTL+ A HCPG+ + FR LHTGDFR
Sbjct: 143 ALLYETTWDEEEWRCSDEFFSVTLIPAGHCPGSVMFLFRSPVFGTVLHTGDFRFTHEQPN 202
Query: 238 ------ASRL--------MQSYPLL--VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVR 281
R+ M + P+L V +V+VL+LD T+C+ ++ FPS+ D L V +
Sbjct: 203 SFLLPHVPRMPHFQKEIDMMTNPVLKSVAGKVDVLFLDNTFCDERFNFPSRADSLREVNQ 262
Query: 282 LTKNCLKKQPKTL----------------------VVVGAYSIGKESVFLAISK 313
+ + +L V++G Y IGKE + ++I +
Sbjct: 263 AILSMFRDHTSSLQGVAKEMNARGHEAKEHAISVAVLIGTYFIGKERIAVSIQE 316
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 373 QYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
Q+ VL P+GWT R + +T+ VPYSEHSSFTEL +FV
Sbjct: 475 QFDGVLCVEPSGWTRKAR--------RQILSKRVTLLHVPYSEHSSFTELVDFV 520
>gi|395827301|ref|XP_003786843.1| PREDICTED: protein artemis [Otolemur garnettii]
Length = 692
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 156/331 (47%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQISLVDEASGKKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+P+ Y+ PS+ + L+ ++
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRGECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ GV+++ + L F + P++
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVDK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + +++ +P+ + E
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWNRLPCGIISKNRVPLHIISIKPSTMWFGERTRKTN 302
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSS++E+++F+
Sbjct: 303 VIV----RTGESSYRACFSFHSSYSEIKDFL 329
>gi|268564045|ref|XP_002639002.1| Hypothetical protein CBG22248 [Caenorhabditis briggsae]
Length = 599
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 142/328 (43%), Gaps = 64/328 (19%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K + G +VD F S C+ +FLTH H DH G+ ++ + +YCS TA+++ + +
Sbjct: 216 KIVIGDQISVDYFVKSS--KCNYHFLTHAHADHCRGISAKFPNK-VYCSKETAKILHLVV 272
Query: 184 --LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR--LQD---GQCYLHTGDF 236
+ IHPLELN + + ++VT ++ANHCPGA + F+ L D G L TGDF
Sbjct: 273 GEPLPEDLIHPLELNIPYKFEHLQVTAIDANHCPGAVMFVFQGPLIDEIAGGPVLCTGDF 332
Query: 237 RAS----RLMQSYPLLVNHRVNV--LYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
RA R ++ L ++ +YLD TY + F S+E +L +N +
Sbjct: 333 RAEASYMRQFENEKLSWVKDIDYSRIYLDNTYFSVDVAFTSRE----ISEQLLQNEIMDH 388
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
P T +V+ + +G+E +I N S + F +PE
Sbjct: 389 PDTDIVLPLHRLGRE------------RIIENLSSKIFEPVFVYPE-------------- 422
Query: 351 HVLPMSSLKFETLKDYLKPYG--NQYAAVLAFRPTGWTYSETVGNQLDLIR--------- 399
L + YG NQ + + GW + + ++
Sbjct: 423 ------KLAIGKALGFFYEYGIPNQKRKIQVVKRNGWKMPDATEKPIIVVEVTQVEHLYG 476
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFVQ 427
S N I +PYS+HSS E+ +F++
Sbjct: 477 ATSESNSNI-KIPYSDHSSREEILKFLK 503
>gi|148675982|gb|EDL07929.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_b [Mus musculus]
Length = 480
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 150/331 (45%), Gaps = 56/331 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++K AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + V VTLL A HCPG+
Sbjct: 69 LLTSPKYRFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSG-------S 121
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E L ++
Sbjct: 122 NGTVLYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGIL 181
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ + L F + P++
Sbjct: 182 ELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDIL 236
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 237 HHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 296
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSSF+E+++F+
Sbjct: 297 VIV----RTGESSYRACFSFHSSFSEIKDFL 323
>gi|311705711|gb|ADQ01121.1| artemis [Alouatta sara]
Length = 692
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 37/223 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPALKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWETRIMSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGSN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+P+ ++ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFFQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
L + + + P +V + + G E +F +SK GV+++ +
Sbjct: 188 ELVGSWITQSPYHVVWLNCKAAYGYEYLFTNLSKEFGVQVHVD 230
>gi|351713833|gb|EHB16752.1| Protein artemis, partial [Heterocephalus glaber]
Length = 677
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 37/222 (16%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMCL 183
++D F +++ AYFL+H H DH GL KR + YCSP+T L L
Sbjct: 14 SIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVHLYCSPVTKEL----L 68
Query: 184 LVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQDG 227
L +P Y I +E+ T I + + VTLL A HCPG+ + F+ +G
Sbjct: 69 LTSPKYRFWEKRIVSIEIETPTQISLVDEASGEEEEIVVTLLPAGHCPGSVMFLFQGNNG 128
Query: 228 QCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVR 281
L+TGDFR ++ + L++ + +YLDTT+C+P+ Y+ PS+ + L+ ++
Sbjct: 129 -TVLYTGDFRLAKGEAARMELLHSGGRVRDIQSVYLDTTFCDPRFYQIPSRGECLSGILE 187
Query: 282 LTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
L ++ + + P +V + + G E +F +S+ LGV+++ +
Sbjct: 188 LVRSWITRSPYHVVWLNCKAAYGYEYLFTKLSEELGVQVHVD 229
>gi|345310055|ref|XP_001515535.2| PREDICTED: protein artemis [Ornithorhynchus anatinus]
Length = 700
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 54/333 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 LSIDRFDRENL-AARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I LE+ T I + ++VTLL A HCPG+ + F+
Sbjct: 69 LLTSPKYRFWENRIISLEVETPTQISLTDEATGEKEEIEVTLLPAGHCPGSVMFLFQGNR 128
Query: 227 GQCYLHTGDFRASR-------LMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNY 278
G L+TGDFR ++ L+ S + + + +YLDTT+C+PK Y+ PS+E+ L+
Sbjct: 129 G-TVLYTGDFRLAKGEVARMELLHSGSRVKD--IQSVYLDTTFCDPKFYQIPSREECLHG 185
Query: 279 VVRLTKNCLKKQPKTLVVVGA-YSIGKESVFLAISKALGVKIYANASRRRVLQSF-DWPE 336
++ L ++ + P +V + + G E +F +S+ G +++ N L F + P+
Sbjct: 186 ILELVRSWITLSPYHVVWLNCKAAFGYEYLFTNLSEEFGAQVHVNK-----LDMFRNMPD 240
Query: 337 LSGNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGN 393
+ ++ T + H L++ L + V++ +P+ + E
Sbjct: 241 ILHHITTDRGSQIHACRHPRAEEFLRWNRLPCGMTSKDGTPLQVISIKPSTMWFGERTRR 300
Query: 394 QLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSS++E+ +F+
Sbjct: 301 TNVIV----RTGESSYRACFSFHSSYSEILDFL 329
>gi|145495220|ref|XP_001433603.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400722|emb|CAK66206.1| unnamed protein product [Paramecium tetraurelia]
Length = 441
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 97/180 (53%), Gaps = 23/180 (12%)
Query: 164 WSHGPIYCSPLTARLV-------RMCLLVNPSYIHPLELNTEHVIDG------VKVTLLE 210
W++G IYCS +T + + + + ++I+ L + ++ + D ++V L
Sbjct: 5 WNYGKIYCSKITKQFILNKFPKIERIVALEFNHIYYLNVLSQELTDKLDDEFTIEVVLFS 64
Query: 211 ANHCPGAALIHFRLQDGQCYLHTGDFRASR-LMQSYPLLVNH----RVNVLYLDTTYCNP 265
ANH PG+++ FR G LHTGDFR +R ++ P+L + +++ L D TYC+P
Sbjct: 65 ANHIPGSSMFLFRGYMGTI-LHTGDFRFNRSMITDNPILFPNNEAIQIDELIFDNTYCDP 123
Query: 266 KYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASR 325
+ FP+ + V ++ + +N +KK + L+ +GA +GKE++ + I K KI N +
Sbjct: 124 MFNFPTADIVAQQMINIIENNIKK--RVLIAMGA--LGKEAIVMEICKYFKTKIIVNQEK 179
>gi|168023878|ref|XP_001764464.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684328|gb|EDQ70731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 603
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 130 PFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV-RMCLLVNPS 188
PF+VD + +++ +FLTH H DH G+ +H PIYC+ LT +LV R ++PS
Sbjct: 9 PFSVDTWTEMAMRK-PFHFLTHAHKDHTVGIDSHGTH-PIYCTSLTEKLVLRRYPTLHPS 66
Query: 189 YIHPLELNTEHVIDG----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----- 239
LE+ ++ G VT +ANHCPGA ++ F G LHTGD R +
Sbjct: 67 LFKNLEIGEPKLLAGEDQAFTVTAFDANHCPGAIMLLFEGSFGT-LLHTGDCRLTIECLN 125
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
+L + + ++ +YLD T+ N PS E+ + V R N + V +
Sbjct: 126 QLPRQFISGSGRALDCVYLDCTFGNVTMVMPSIEEAIEQVKRCIWN---HSSEARVYLAC 182
Query: 300 YSIGKESVFLAISKALGVKIYAN 322
+G+E++ A++ + G KI+ N
Sbjct: 183 DMLGQETLLEAVANSFGQKIFIN 205
>gi|218188863|gb|EEC71290.1| hypothetical protein OsI_03304 [Oryza sativa Indica Group]
Length = 1226
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 259 DTTYCNPKYKFPSKEDVLNYVV----RLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKA 314
DTTYCNPK+ FP +++ L YVV R+ + + L ++ Y +GKE + L +++
Sbjct: 30 DTTYCNPKFTFPPQKESLEYVVNSIKRVKEESRASGERVLCLIATYVVGKERILLEVARR 89
Query: 315 LGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL---------PMSSLKFETLKD 365
G KI+ ++ + +L G T +HV P F +K+
Sbjct: 90 CGCKIHVDSRKMEILTLLGIGGEDGVFTEDAAATDVHVTGWNILGETWPYFRPNFVKMKE 149
Query: 366 YLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREF 425
+ G Y + F PTGW Y ET + ++ ++ I+ VPYSEHSS+ ELR++
Sbjct: 150 IMVERG--YNKAVGFVPTGWMY-ETKKEGFAV---RTKDSLEIHLVPYSEHSSYNELRDY 203
Query: 426 VQ 427
V+
Sbjct: 204 VK 205
>gi|344277985|ref|XP_003410777.1| PREDICTED: protein artemis-like [Loxodonta africana]
Length = 691
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 37/223 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLDCSLKVFLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIIAIEVETPTQISLIDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+P+ Y+ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
L + + P +V + + G E +F +S+ GV+++ +
Sbjct: 188 ELVGGWINRSPYHVVWLNCKAAYGYEYLFTNLSEQFGVQVHVD 230
>gi|340372537|ref|XP_003384800.1| PREDICTED: protein artemis-like [Amphimedon queenslandica]
Length = 606
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 144/336 (42%), Gaps = 53/336 (15%)
Query: 127 PGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK-------RWSHGPIYCSPLTARLV 179
PG VD F + + A+FL+H H DH GL + YCS +T L
Sbjct: 12 PG--LVVDRFNPVNCRRGRAFFLSHCHKDHMSGLDSDELLKVLKELKIDFYCSEVTHAL- 68
Query: 180 RMCLLVNPSYIH--------------PLELNT---EHVIDGVKVTLLEANHCPGAALIHF 222
L +P + H L+LNT E + V VTLL A HCPG+ + F
Sbjct: 69 ---LSNDPGFSHLMPYLVSVPVGETISLKLNTFRNEDQVVTVNVTLLPAGHCPGSVMFLF 125
Query: 223 RLQDGQCYLHTGDFR--ASRLMQSYPLLVNH----RVNVLYLDTTYCNPK-YKFPSKEDV 275
+ G L+TGDFR S + PL + + LYLDTT+C+PK S+++
Sbjct: 126 QGDAGN-VLYTGDFRLSLSDIRGCGPLHTDDGKVIEIKALYLDTTFCHPKSTNIISRDET 184
Query: 276 LNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWP 335
+ +++ K L + P +V + S G E + +++S L I+ + R P
Sbjct: 185 RDIILKKVKEWLAQGPDNIVRLDCRSFGYEHILMSLSLQLDTNIHTAGWKIRSYSVL--P 242
Query: 336 ELSGNLCTQGNDTLLHVLPMSSLKFETLKDYL----KPYGNQYAAVLAFRPTG-WTYSET 390
++ L GN T +H ++ +++ L P +L +P+ W S
Sbjct: 243 QVHQCLTEDGNSTRIHAC-VNKKGTQSVSGKLPCGATPTKGGTPNILTIKPSAQWFLSN- 300
Query: 391 VGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
D P S ++ V +S HSS++E+ E V
Sbjct: 301 -----DKPHP-SAPEFNLFRVLHSMHSSYSEIIEVV 330
>gi|241948347|ref|XP_002416896.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223640234|emb|CAX44483.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 860
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 89/249 (35%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH-------------------------- 166
VDAF + + YFLTHFH DHYGG+ K+W +
Sbjct: 235 VDAFSFAPHDTINQYFLTHFHADHYGGISKKWPYERVFGNEDIYNESNLNLNLNFNDDKI 294
Query: 167 --GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID---------------------- 202
IYC+ +T +L+ + ++ +I LELN ++ I
Sbjct: 295 YKKIIYCTNITGKLLTLRYSIDSRFIKQLELNIKYKIKNYIYNDSIKKDFGYKTNNNNNN 354
Query: 203 ----------GVKVTLLEANHCPGAALIHFRLQ--DGQCY--LHTGDFRASRLMQSYPLL 248
G+ VT + ANHCPGAA+ F D + Y LH GDFR + + +P+L
Sbjct: 355 NNNNNIDMTPGLYVTPIMANHCPGAAMFFFESIGIDKKIYRILHCGDFRVNMEILQHPIL 414
Query: 249 -------------------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
++ ++ +YLDTTY +PK+ P +E V + L
Sbjct: 415 KPFSLNNHNNDSNNNNGKNNNGKNDLSLYIDKVYLDTTYMSPKHNLPKQELVCETLADLF 474
Query: 284 KNCLKKQPK 292
+ +++Q K
Sbjct: 475 HDLIQQQEK 483
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 20/117 (17%)
Query: 295 VVVGAYSIGKESVFLAISKALGVKIY-ANASRRR----VLQSFDWPELS---------GN 340
+V+G Y IGKE + ++ISK L IY +N R+ + ++F L GN
Sbjct: 552 IVIGTYVIGKEKLAISISKRLNCLIYLSNIGSRKDKFEIFKTFKNDYLQSIITIDKEFGN 611
Query: 341 LCT---QGNDTLLHVLPMSSL-KFETLKDYL--KPYGNQYAAVLAFRPTGWTYSETV 391
T G+D ++H++PM+ + E L Y Y + + PTGW+Y++ +
Sbjct: 612 TTTTSNSGDDCVIHLVPMTIVANNEELSKYFNHNKYYQFFERCIGICPTGWSYNKNI 668
>gi|395539074|ref|XP_003771498.1| PREDICTED: protein artemis [Sarcophilus harrisii]
Length = 692
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 158/340 (46%), Gaps = 68/340 (20%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F ++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRQNLTA-RAYFLSHCHKDHMKGLRAPSLKRRLECSLKVHLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL N Y I LE+ T I + V VTLL A HCPG+ + F+ +
Sbjct: 69 LLTNSRYSFWEKRIIALEIETPTQISLIDEASGEKEEVVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDTT+C+PK Y+ PS+ + LN ++
Sbjct: 129 G-TVLYTGDFRLAKGEAARMEFLHSGNRVKDIQSVYLDTTFCDPKYYQIPSRMECLNGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + P +V + + G E +F +S+ G +++ N L F + P++
Sbjct: 188 ELVRSWITLSPYHIVWLNCKAAYGYEYLFTNLSEEFGTQVHVNK-----LDMFKNMPDIL 242
Query: 339 GNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAA-----------VLAFRP-TGWT 386
+L T + T +H + + ++++ + GN+ +++ +P T W
Sbjct: 243 YHLTTDRH-TQIH-----ACRHPRVEEFFR--GNRLPCGITSKNGTPLHIISIKPSTMW- 293
Query: 387 YSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
G + + R + Y +S HSS++E+++F+
Sbjct: 294 ----FGERTRKTNVIMRTGESSYRACFSFHSSYSEIKDFL 329
>gi|403366058|gb|EJY82820.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 592
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 40/241 (16%)
Query: 202 DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLL------------V 249
+GV V +++A HCPGA + FR + G + HTGDFR S M +L +
Sbjct: 15 EGVSVMMMDAFHCPGAVMFLFRGKMGTVF-HTGDFRFSEQMFDNEILFPPSKRNPQMKQI 73
Query: 250 NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFL 309
+ ++ L+LD T+ +P+Y FPS+E+ + + +K + + +Y++GKE VF+
Sbjct: 74 SVDIDYLFLDNTFADPEYDFPSREEAYKSLT----DTIKSHKDHRIFLFSYNLGKEEVFV 129
Query: 310 AISKALGVKIYANASRRRVLQSFDW-PELSGNLCTQGNDTLLHVLPMSSL-KFETLKDYL 367
+++ + + R R L D P+L QG +H+ + L KF+ K
Sbjct: 130 NLAQDFETLVVVDEDRFRKLSIMDLRPDLFTTDEKQG---WIHIKSIRELKKFDIEK--- 183
Query: 368 KPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
N+ + TGW +R + VPYS HS++ E+ FV+
Sbjct: 184 ---CNEEEPTIFIIMTGWN------------DKYNRNLPYYFKVPYSSHSNYREIERFVK 228
Query: 428 V 428
Sbjct: 229 A 229
>gi|70924607|ref|XP_735125.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56508505|emb|CAH79157.1| hypothetical protein PC000135.03.0 [Plasmodium chabaudi chabaudi]
Length = 120
Score = 86.3 bits (212), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKV 206
YFLTHFH DHY + K ++ I+ S +T +L+ + VN Y+H L++N + + ++
Sbjct: 17 YFLTHFHADHYMNINKHFNEN-IFSSTITKKLLINIIGVNEKYVHSLKVNKNYYLFNFEI 75
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241
L++ANHCPG+ +I+F +G +HTGDFR S +
Sbjct: 76 ILIDANHCPGSVIIYFEFSNGTKIIHTGDFRYSNV 110
>gi|410248332|gb|JAA12133.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 151/332 (45%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ YFL+H H H GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RPYFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL + Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSRKYRFWKKQIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ Y + +YLDT C+P+ Y+ PS+E+ L V+
Sbjct: 129 GTV-LYTGDFRLVQGEAARMELLYSGGRVKDIQSVYLDTMLCDPRFYQIPSREECLRGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + P +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|1326018|emb|CAA54243.1| SNM1 [Saccharomyces cerevisiae]
Length = 216
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 98/212 (46%), Gaps = 45/212 (21%)
Query: 155 DHYGGLGKRWSH---GPI----YCSPLTARLVRMCLLVNPSYIHPLELNTEH-VIDGVKV 206
DHY L K W++ PI YCS +TA LV + + I L +N + D + V
Sbjct: 1 DHYIRLKKSWNNPDENPIKKTLYCSKITAILVNLKFKIPMDEIQILPMNKRFWITDTISV 60
Query: 207 TLLEANHCPGAALIHFRLQDGQCY-------LHTGDFRASRLM-----QSYPLLVNHRVN 254
L+ANHCPGA ++ F+ Y LHTGDFR++ M + N ++
Sbjct: 61 VTLDANHCPGAIIMLFQEFLANSYDKPIRQILHTGDFRSNAKMIETIQKWLAETANETID 120
Query: 255 VLYLDTTYCNPKYKFPSK----EDVLNYVVRLTKNCLKK--------------------- 289
+YLDTTY Y FPS+ E V ++ +RL K+ K
Sbjct: 121 QVYLDTTYMTMGYNFPSQHSVCETVADFTLRLIKHGKNKTFGDSQRNLFHFQRKKTLTTH 180
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYA 321
+ + L +VG Y+IGKE + + I + L K++
Sbjct: 181 RYRVLFLVGTYTIGKEKLAIKICEFLKTKLFV 212
>gi|311705723|gb|ADQ01127.1| artemis [Callicebus cupreus]
Length = 692
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 154/331 (46%), Gaps = 50/331 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPALKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIMSIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+ + Y+ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDRRFYQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L + + + P +V + + G E +F +S+ GV+++ + L F + P++
Sbjct: 188 ELVGSWITQSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVDK-----LDMFRNMPDIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+L T N + H ++ L + ++ +P+ + E
Sbjct: 243 RHLTTDRNTQIHACRHPNAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKTN 302
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
++ R + Y +S HSS++E+++F+
Sbjct: 303 VIV----RTGESSYRACFSFHSSYSEIKDFL 329
>gi|432100277|gb|ELK29045.1| Protein artemis [Myotis davidii]
Length = 691
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 114/223 (51%), Gaps = 37/223 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPALKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGDN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+C+PK Y+ PS+ + L+ ++
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHCGGRVKDIQSVYLDTTFCDPKFYQIPSRGECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
L ++ + + P +V + + G E +F +S+ G++++ +
Sbjct: 188 ELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVD 230
>gi|242077909|ref|XP_002443723.1| hypothetical protein SORBIDRAFT_07g000830 [Sorghum bicolor]
gi|241940073|gb|EES13218.1| hypothetical protein SORBIDRAFT_07g000830 [Sorghum bicolor]
Length = 699
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 121/277 (43%), Gaps = 26/277 (9%)
Query: 130 PFTVDAFR-YGSIKGCSAYFLTHFHYDHYGGLGKRWSHG----PIYCSPLTARL-VRMCL 183
PF VD + S+K FLTH H DH G+ + PIY S LT + +R+
Sbjct: 10 PFAVDTWTPASSLK--RHRFLTHAHRDHLVGIAATSAVSASSSPIYASRLTILIALRIFP 67
Query: 184 LVNPSYIHPLELNTEHV----IDG-VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
++ + L++ + DG VT L+ANHCPGA + F G LHTGD R
Sbjct: 68 QLDRAAFVELDVGDPPLRVPDPDGDFTVTALDANHCPGAVMFLFEGPFG-AVLHTGDCRL 126
Query: 239 SR---LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
+ + P L R++ L+LD T+ +FP+KED + V+ NC+ K P
Sbjct: 127 TPDCLTALTPPHLARGRIDYLFLDCTFARCALRFPTKEDSIRQVI----NCVWKHPSAPA 182
Query: 296 V-VGAYSIGKESVFLAISKALGVKIYANASRRRVLQ---SFDWPELSGNLCTQGNDTLLH 351
V + +G+E V + +S+A G KIY + R + PE+ + T H
Sbjct: 183 VYLVCDMLGQEDVLIGVSRAFGSKIYVDRERNSDCHQTLAHVAPEILAD-ADAAASTRFH 241
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS 388
V+P L + L RP+ Y+
Sbjct: 242 VIPFPRLSERATEILALARAAHQPEPLIIRPSSQWYA 278
>gi|261865341|gb|ACY01922.1| hypothetical protein [Beta vulgaris]
Length = 551
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 141/320 (44%), Gaps = 35/320 (10%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL--V 185
G PF+VD + S K +FLTH H DH + +S PIY + LT L+ +C +
Sbjct: 8 GLPFSVDTWTPNS-KFKRHHFLTHAHKDHCSNITSYFSF-PIYSTLLTKSLI-LCYFPQL 64
Query: 186 NPSYIHPLELNTEHVID----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS-R 240
+ S +E+ ++D VT +ANHCPGA + F + G LHTGD R +
Sbjct: 65 DESLFVQIEVGQSIIVDDPDGAFTVTAFDANHCPGAVMFLFEGEFGN-ILHTGDCRLTPE 123
Query: 241 LMQSYPLLVNHR--------VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
+Q+ P R ++ ++LD T+ PSK+ L V+ NC+ K P
Sbjct: 124 CLQNLPEKYIARKGKEPSSQLDFVFLDCTFGKSLMDIPSKQSALQQVI----NCIWKHPD 179
Query: 293 TLVV-VGAYSIGKESVFLAISKALGVKIYANASRR-RVLQSFDWPELSGNLCTQGNDTLL 350
V + +G+E V + + + G KIY + ++ Q+ + ++ + ++ +
Sbjct: 180 VPTVYLTCNMLGQEEVLVKVFQTFGSKIYVDKAKHPDFYQAMGF--IAPQIISEDPSSRF 237
Query: 351 HVLPMSSLKFETLKDYL-KPYGNQYAAVLAFRPTG-WTYSETVGNQLDLIRPLSRGNIT- 407
H+ +E K + + N L RP+ W E + + L R NI
Sbjct: 238 HLFEGFPKLYEKAKKKISEARENMQPEPLIIRPSAQWYAREETELTVMERKILERSNIPV 297
Query: 408 -----IYGVPYSEHSSFTEL 422
++ V YS HSS EL
Sbjct: 298 KDQFGVWHVCYSMHSSRQEL 317
>gi|406859025|gb|EKD12098.1| artemis protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 957
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 110/236 (46%), Gaps = 41/236 (17%)
Query: 133 VDAFRYGS-IKGCSAYFLTHFHYDHYGGL-GKRWSHGPIYCSPLTAR-LVRMCLLVN--- 186
VD FR + + A FL+H H DH GL K W IYCSP T L+R+ V+
Sbjct: 16 VDYFRPAAGLAPPRACFLSHVHSDHLAGLDSKHWKTSFIYCSPATREILLRLERRVDRVG 75
Query: 187 ----------------PSYIHPLELNTEHVID---GV--KVTLLEANHCPGAALIHFRLQ 225
+ P+ L T I+ GV +VTL +ANHC GA + F +
Sbjct: 76 FEMKTLAARKVQYGHLEKLLKPIPLGTPTQIELKPGVTLQVTLFDANHCAGAVMFLFEM- 134
Query: 226 DGQCYLHTGDFRAS----RLMQSYPLLVNHRVNV-----LYLDTTYCNPKYKFPSKEDVL 276
D L+TGD R+ + PLL+ + + +YLDT+ + + FP K D L
Sbjct: 135 DNLAVLYTGDIRSEPWHVSSLARNPLLLEYTSGIKTLDCIYLDTSRTD-QSIFPPKADGL 193
Query: 277 NYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
L + L+ T+ + A++ G E V++A+SKAL +I+ N R+ +S
Sbjct: 194 R---ELLQKVLQYPADTIFHLSAWTYGYEEVWMALSKALKSQIHVNKYTYRIFESL 246
>gi|426364044|ref|XP_004049132.1| PREDICTED: protein artemis [Gorilla gorilla gorilla]
Length = 682
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 52/327 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGP----IYCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR +YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + +
Sbjct: 69 LLTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVM------N 122
Query: 227 GQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKN 285
+ A+R+ + + + +YLDTT+C+P+ Y+ PS+E+ L+ V+ L ++
Sbjct: 123 SRPXXXXAQREAARMEFLHSVGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRS 182
Query: 286 CLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLCT 343
+ + P +V + + G E +F +S+ LGV+++ N L F + PE+ +L T
Sbjct: 183 WITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLTT 237
Query: 344 QGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLIR 399
N + H ++ L + +++ +P T W G +
Sbjct: 238 DRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKTN 292
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 293 VIVRTGESSYRACFSFHSSYSEIKDFL 319
>gi|390349305|ref|XP_781856.3| PREDICTED: protein artemis-like [Strongylocentrotus purpuratus]
Length = 389
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 54/327 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGL-GKRWS-------HGPIYCSPLTARLVRMC 182
+D F+ ++ YFL+H H DH GL K+++ H +YCS +T
Sbjct: 14 IAIDRFQGDAVLRARGYFLSHCHTDHMVGLSSKKFADRLKCNPHIRLYCSEVTYEF---- 69
Query: 183 LLVNPSYIH--------PLELNTEHVI--------DGVKVTLLEANHCPGAALIHFRLQD 226
LL + Y H P+E + + + + VTLL A HCPG+ + F
Sbjct: 70 LLTDDKYKHLQASLSSLPIEQTSTVALVNEFNGQEEKLLVTLLPAGHCPGSVMFLFEGDQ 129
Query: 227 GQCYLHTGDFRASR--LMQSYPLLVNHRVN---VLYLDTTYCNPKYKF-PSKEDVLNYVV 280
G L+TGDFR ++ + PL RV +YLDTT+C P+ + PS+ + + ++
Sbjct: 130 GTV-LYTGDFRLAKGEAARMEPLHSGSRVKDIISVYLDTTFCVPEAMYIPSRGESKDALL 188
Query: 281 RLTKNCLKKQPKTLVVVGAYS-IGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSG 339
L + + K +V + + G E +F+ +SK KI+ + + Q P+L
Sbjct: 189 DLVDSHISKSAGHMVKLNCKAKYGYEYLFVELSKTFNQKIHVCDTLMK--QYNRVPDLCY 246
Query: 340 NLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIR 399
+L T+G+ T +H + + +L+ P+ ++ + D+IR
Sbjct: 247 HLTTEGSLTQIHACRYGPCSLKNATN-----------ILSITPSTMWFTGNARPE-DVIR 294
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFV 426
+ R Y + +S HSSF+E+R+F+
Sbjct: 295 KVGRR----YRLCFSFHSSFSEIRDFL 317
>gi|311705715|gb|ADQ01123.1| artemis [Saimiri sciureus]
Length = 692
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 114/223 (51%), Gaps = 37/223 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPALKRRLECSLKVCLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL NP Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTNPKYRFWEKRIMSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ ++ +YLDTT+ +P+ ++ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIHSVYLDTTFFDPRFFQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
L + + + P +V + + G E +F +S+ GV+++ +
Sbjct: 188 ELVGSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVD 230
>gi|242210354|ref|XP_002471020.1| predicted protein [Postia placenta Mad-698-R]
gi|220729922|gb|EED83788.1| predicted protein [Postia placenta Mad-698-R]
Length = 206
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 20/150 (13%)
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMS 356
+ YSIGKE + AI++AL K+Y ++ + +L+ PEL L + +H++P+
Sbjct: 6 LSTYSIGKERIVKAIARALQTKVYCDSRKAAILRCQADPELHDLLTKDPLEGGVHLVPLG 65
Query: 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL------------------DLI 398
+ + LKDY++ + Y + FRPTGWT+S G+ + +
Sbjct: 66 VIASDRLKDYVERFKGHYIKAVGFRPTGWTFSAPTGSDMVPSVSTIIARTQGRTFTHAHL 125
Query: 399 RPL--SRGNITIYGVPYSEHSSFTELREFV 426
P+ S + +YGVPYSEHSSF EL F
Sbjct: 126 SPMRNSTAALQVYGVPYSEHSSFFELTCFA 155
>gi|403278119|ref|XP_003930673.1| PREDICTED: protein artemis [Saimiri boliviensis boliviensis]
Length = 785
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 37/223 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 107 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPALKRRLECSLKVCLYCSPVTKEL---- 161
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL NP Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 162 LLTNPKYRFWEKRIMSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 221
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + ++ +YLDTT+ +P+ ++ PS+E+ L+ ++
Sbjct: 222 GT-VLYTGDFRLAKGEAARMELLHSGGRVKDIHSVYLDTTFFDPRFFQIPSREECLSGIL 280
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
L + + + P +V + + G E +F +S+ GV+++ +
Sbjct: 281 ELVGSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVD 323
>gi|413921528|gb|AFW61460.1| hypothetical protein ZEAMMB73_267019 [Zea mays]
Length = 653
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 136/329 (41%), Gaps = 38/329 (11%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG----PIYCSPLTARLVRMCL 183
G PF VD + S FLTH H DH G+ + P+Y S LT + + L
Sbjct: 8 GLPFAVDTWTPASALK-RHRFLTHAHRDHLAGITATSAVSASSSPVYASRLT---ILIAL 63
Query: 184 LVNPSYIHP--LELNTEHVI------DG-VKVTLLEANHCPGAALIHFRLQDGQCYLHTG 234
+ P +EL+ DG VT ++ANHCPGA + F G LHTG
Sbjct: 64 RIFPQLDRAAFVELDVGQPPLRVPDPDGDFTVTAVDANHCPGAVMFLFEGPFGD-VLHTG 122
Query: 235 DFRAS-RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
D R + + + + R++ L+LD T+ +FP+ +D + V+ +C+ K P
Sbjct: 123 DCRLTPDCLSALTSHLARRIDYLFLDCTFARCSLRFPATQDSIRQVI----DCVWKHPSA 178
Query: 294 LVV-VGAYSIGKESVFLAISKALGVKIYANASRRRVLQ---SFDWPELSGNLCTQGNDTL 349
VV + +G+E V + +SKA G KIY + + + PE+ T
Sbjct: 179 PVVYLVCDMLGQEDVLVEVSKAFGSKIYVDREKNSDCHQRLAHVAPEILAA-DDAAPSTR 237
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY----------SETVGNQLDLIR 399
HVLP L + + + L RP+ Y + T Q ++
Sbjct: 238 FHVLPFPRLSERATEILAQARAARQPEPLIIRPSSQWYAYYDPPPPEEASTQQQQKPVLT 297
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFVQV 428
R ++ V S HSS EL + + +
Sbjct: 298 EAMRDEFGVWHVCLSMHSSREELEQALGI 326
>gi|118356261|ref|XP_001011389.1| hypothetical protein TTHERM_00433640 [Tetrahymena thermophila]
gi|89293156|gb|EAR91144.1| hypothetical protein TTHERM_00433640 [Tetrahymena thermophila
SB210]
Length = 492
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 26/184 (14%)
Query: 150 THFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHV-----IDGV 204
T+ DHY GL W + PIYCS ++ L+ + IH L+LNT++ I+ +
Sbjct: 6 TNLIKDHYEGLSPLWDYSPIYCSEISKNLI-LQKYPKIQNIHALQLNTKYEFTLNNIESL 64
Query: 205 KVTL--LEANHCPGAALIHFRLQDGQCYLHTGDFRASR-LMQSYPLLV------------ 249
KV + +A+H PG+ +I F+ G + HTGDFR ++ ++ P+L
Sbjct: 65 KVEVWFFDAHHIPGSVMILFKGYMGTIF-HTGDFRFNQSMIDCNPILFPPELRTKNLQNC 123
Query: 250 NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFL 309
+ +++ + D TYCNP + FP ++V +V + + + + L+ +GA +GKE + +
Sbjct: 124 SIQIDEMIYDNTYCNPAFNFPRGDEVFKRMVEIIEK--NRNKRVLIAMGA--LGKEDICI 179
Query: 310 AISK 313
+S+
Sbjct: 180 KLSE 183
>gi|302829404|ref|XP_002946269.1| hypothetical protein VOLCADRAFT_86370 [Volvox carteri f.
nagariensis]
gi|300269084|gb|EFJ53264.1| hypothetical protein VOLCADRAFT_86370 [Volvox carteri f.
nagariensis]
Length = 2638
Score = 84.0 bits (206), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/83 (51%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 115 IVDRSCPFYKKIPGTPFT--VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS 172
+ ++ P +K IPGT T VDAFRY G AYFLTH H DHY GL W GPIYCS
Sbjct: 1 MASQALPPHKVIPGTGGTIVVDAFRYAH-PGIKAYFLTHAHSDHYTGLSDSWCCGPIYCS 59
Query: 173 PLTARLVRMCLLVNPSYIHPLEL 195
TARLV V+P+Y+ PL +
Sbjct: 60 ETTARLVAHLCGVDPAYLKPLPM 82
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 203 GVKVTLLEANHCPGAALIHFRL-QDGQCYLHTGDFRASRLMQSYPLLVNHR-VNVLYLDT 260
GV+VTL++ANHCPGA + FRL G YLHTGD R M + PLL R + LDT
Sbjct: 145 GVEVTLVDANHCPGAVQLLFRLPASGARYLHTGDMRFCAAMATCPLLAAWRGCEAVLLDT 204
Query: 261 TYCNPKYKFP 270
TYC+PK+ FP
Sbjct: 205 TYCSPKHTFP 214
Score = 75.1 bits (183), Expect = 6e-11, Method: Composition-based stats.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 15/146 (10%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE--LSGNLCTQGNDTL 349
+ L +V Y I KE + LAI + GV++Y + ++ VL PE L+ T T
Sbjct: 408 RRLYLVSTYVIRKERILLAIRQRCGVRVYVSETKLAVLSLLGLPEQQLADTFTTDPRVTP 467
Query: 350 LHVLPMSSLKFETLKDYLKPYGNQY--------AAVLAFRPTGWTYSETVGNQLDLIRPL 401
+HV+P +L ET + + N AV+ F PTGW Y + +R
Sbjct: 468 VHVVPWGTLG-ETWPFFRPNFVNMQRIAEEMGAPAVVGFCPTGWLYE--MKRTAFPVR-- 522
Query: 402 SRGNITIYGVPYSEHSSFTELREFVQ 427
+RG+++++ VPYSEHSS++ELRE+V+
Sbjct: 523 TRGSLSVHLVPYSEHSSYSELREYVR 548
>gi|449480732|ref|XP_004176570.1| PREDICTED: LOW QUALITY PROTEIN: protein artemis [Taeniopygia
guttata]
Length = 654
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 39/284 (13%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTEHVI----------DGVKVTLLEAN 212
+YCSP+T L LL N Y I LE+ T I + V VTLL A
Sbjct: 28 LYCSPVTKEL----LLTNWKYKFWENHIVALEVETPTQISLEDETSGEKEDVVVTLLPAG 83
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK- 266
HCPG+ + F ++G L+TGDFR A+R+ + + +YLDTT+C+PK
Sbjct: 84 HCPGSVMFLFEGENGT-VLYTGDFRLAKGEAARMELLHSGTRVKDIQSVYLDTTFCDPKF 142
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASR 325
Y PS+E+ LN ++ L +N +V + + G E +F+ +S+ LG+K++ N
Sbjct: 143 YHIPSREECLNGILELVRNWTSLSRNHVVWLNCKAAYGYEYLFINLSEELGIKVHMN--- 199
Query: 326 RRVLQSFDWPELSGNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP 382
++ + PE+ ++ T + H + L + +++ +P
Sbjct: 200 -KLDMXRNMPEILCHVTTDQRTQIHACRHPRDDDCFRGNRLPCGMTCLNGTPLHIISIKP 258
Query: 383 TGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ + E ++R R Y +S HSS++E+++F+
Sbjct: 259 STMWFGERKKKTSIIVRTGER----TYRACFSFHSSYSEIKDFL 298
>gi|303285386|ref|XP_003061983.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456394|gb|EEH53695.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 629
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 88/188 (46%), Gaps = 31/188 (16%)
Query: 146 AYFLTHFHYDHYGGLGKRWSH--GPIYCSPLTARLVRMCLLVNPS-------YIHPLELN 196
AYFLTH H DH GL W G IYCSP+T L+ +P+ + L L
Sbjct: 58 AYFLTHAHSDHLVGLNGEWESRGGAIYCSPVTRALL---FRKHPALETRADVVVVALSLG 114
Query: 197 TEHVI-----DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR----------ASRL 241
HVI + + VT L+A HCPG+ F G+ Y HTGDFR A+
Sbjct: 115 RPHVITLQGGELLTVTPLDAGHCPGSVGFLFEGACGRIY-HTGDFRREDWCGRGGAAAAA 173
Query: 242 MQSYP-LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
+ P L +++L LD TY NP Y FP++ D V+ + + V VG
Sbjct: 174 ASAIPECLTRAPLDLLLLDNTYANPTYDFPARSDAAEEVLAIVSEATAR--GCDVYVGID 231
Query: 301 SIGKESVF 308
S+GKE++
Sbjct: 232 SLGKEALL 239
>gi|410290018|gb|JAA23609.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 151/332 (45%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ YFL+H H H GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RPYFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL + Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSRKYRFWKKQIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ Y + +YLDT C+P+ Y+ PS+E+ L+ V+
Sbjct: 129 G-TVLYTGDFRLVQGEAARMELLYSRGRVKDIQSVYLDTMLCDPRFYQIPSREECLSGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVQSWITRSLYRVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|125559879|gb|EAZ05327.1| hypothetical protein OsI_27531 [Oryza sativa Indica Group]
Length = 663
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL--LV 185
G PF VD + S FLTH H DH G+ + +Y S LT + R L
Sbjct: 8 GLPFAVDTWTAASAVK-RHRFLTHAHRDHIAGITAT-NVAAVYASRLTILIARHIFPQLD 65
Query: 186 NPSYIHPLELNTEHVI---DG-VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241
+EL ++ DG VT +ANHCPGA + F LHTGD RL
Sbjct: 66 RADAFVEVELGAPVLVPDPDGDFTVTAFDANHCPGAVMFLFEGASFGRVLHTGD---CRL 122
Query: 242 MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV-VGAY 300
+ L + ++LD T+ FPSK+D + V+ NC+ K P VV + +
Sbjct: 123 TPDFRFLA---ADYVFLDCTFAACSLHFPSKDDSIRQVI----NCIWKHPNAPVVYLVSD 175
Query: 301 SIGKESVFLAISKALGVKIYANASR 325
+G+E + + +SK G KIY + +
Sbjct: 176 MLGQEEILMEVSKVFGSKIYVDRDK 200
>gi|126340452|ref|XP_001369072.1| PREDICTED: protein artemis-like [Monodelphis domestica]
Length = 681
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 102/208 (49%), Gaps = 36/208 (17%)
Query: 146 AYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMCLLVNPSY------IH 191
AYFL+H H DH GL KR + YCSP+T L LL +P Y I
Sbjct: 28 AYFLSHCHKDHMKGLRAPPLKRRLECSLKVHLYCSPVTKEL----LLTSPKYSFWEKRII 83
Query: 192 PLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR---- 237
LE+ T I + V VTLL A HCPG+ + F+ +G L+TGDFR
Sbjct: 84 ALEIETPTQISLIDEASGEKEEVVVTLLPAGHCPGSVMFLFQGNNG-TVLYTGDFRLAKG 142
Query: 238 -ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
A+R+ + + +YLDTT+ +PK Y+ PS+ + L ++ L +N + P +V
Sbjct: 143 EAARMEFLHSGSRVKDIQSVYLDTTFFDPKFYQIPSRVECLKGILELVRNWITLSPYHVV 202
Query: 296 VVGAYSI-GKESVFLAISKALGVKIYAN 322
+ + G E +F +S+ G +++ N
Sbjct: 203 WLNCKAAYGYEYLFTNLSEEFGTQVHVN 230
>gi|449273909|gb|EMC83252.1| Protein artemis, partial [Columba livia]
Length = 636
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 141/294 (47%), Gaps = 59/294 (20%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTEHVI----------DGVKVTLLEAN 212
+YCSP+T L LL + Y I LE+ T I + ++VTLL A
Sbjct: 6 LYCSPVTKEL----LLTSRKYKFWENHIVALEVETPTQISLVDETSGEKEDIEVTLLPAG 61
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK- 266
HCPG+ + F G L+TGDFR A+R+ + + +YLDTT+C+PK
Sbjct: 62 HCPGSVMFLFEGDKG-TVLYTGDFRLAKGEAARMELLHSGTGVKDIQSVYLDTTFCDPKF 120
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASR 325
Y PS+E+ LN ++ L ++ P +V + + G E +F+ +S+ LG+K++ N
Sbjct: 121 YHIPSREECLNGILELVRSWTSLTPYHVVWLNCKAAYGYEYLFINLSEELGIKVHVNK-- 178
Query: 326 RRVLQSF-DWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAA-------- 376
L F + P++ ++ T + T +H + + ++Y++ GN+
Sbjct: 179 ---LDMFRNMPDILYHITTDRH-TQIH-----ACRHPRDEEYVR--GNRLPCGMTCQNGT 227
Query: 377 ---VLAFRP-TGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+++ +P T W G ++ + R T Y +S HSS++E+++F+
Sbjct: 228 PLHIISIKPSTMW-----FGERMKKTNVIVRTGETTYRACFSFHSSYSEIKDFL 276
>gi|224093392|ref|XP_002309909.1| predicted protein [Populus trichocarpa]
gi|222852812|gb|EEE90359.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 140/329 (42%), Gaps = 42/329 (12%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG--PIYCSPLTARLVRMCL-L 184
G PF+VD + S K +FLTH H DH G+ +H PIY + LT LV
Sbjct: 8 GLPFSVDTWSPNS-KRKRHHFLTHAHKDHTSGI---LTHSCYPIYATHLTKLLVLQNYPQ 63
Query: 185 VNPSYIHPLELNTEHVI---DG-VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS- 239
+ S +E+ V DG KVT +ANHCPGA + F G LHTGD R +
Sbjct: 64 LEGSLFVGIEVGESVVFNDPDGEFKVTAFDANHCPGAVMFLFEGNFGN-ILHTGDCRLTP 122
Query: 240 --------RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
+ + +++ ++LD T+ K PSK + V+ NC+ K P
Sbjct: 123 EGVRCLPEKYISKKGKEPRCQLDYVFLDCTFGKFTQKLPSKHSAIQQVL----NCIWKHP 178
Query: 292 -KTLVVVGAYSIGKESVFLAISKALGVKIY----ANASRRRVLQSFDWPELSGNLCTQGN 346
T+V + +G+E V A+S+ G KI+ AN R L + PE + TQ
Sbjct: 179 AATVVYLTCDLLGQEDVLAAVSETFGSKIFVDEVANTESFRAL-TLTVPE----ILTQDP 233
Query: 347 DTLLHVLP-MSSLKFETLKDYLKPYGNQYAAVLAFRPTG-W-----TYSETVGNQLDLIR 399
+ H+ L K + N L RP+ W YSET +
Sbjct: 234 SSRFHMFDGFPKLYERAAKKIAEAQANLQPEPLIIRPSAQWYACEEGYSETESQRKLRFN 293
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFVQV 428
R +++ V YS HSS EL +Q+
Sbjct: 294 EAVRDPNSVWHVCYSMHSSRGELEWALQL 322
>gi|297844862|ref|XP_002890312.1| hypothetical protein ARALYDRAFT_472127 [Arabidopsis lyrata subsp.
lyrata]
gi|297336154|gb|EFH66571.1| hypothetical protein ARALYDRAFT_472127 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 104/218 (47%), Gaps = 26/218 (11%)
Query: 128 GTPFTVDAF-RYGSIKGCSAY-FLTHFHYDHYGGLG-KRWSHGPIYCSPLT-ARLVRMCL 183
G PF VD F Y + K + FLTH H DH G+ PIY + LT + L++
Sbjct: 8 GLPFAVDTFGPYTTTKRIKRHHFLTHAHKDHTVGISPSNIVVFPIYSTSLTISLLIQRHP 67
Query: 184 LVNPSYIHPLELNTEHVIDG----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
++ S+ +E+ ++D KVT +ANHCPGA + F G LHTGD R +
Sbjct: 68 QLDESFFVRIEIGQSVIVDDPDGQFKVTAFDANHCPGAVMFLFEGSFGN-ILHTGDCRLT 126
Query: 240 -RLMQSYP-LLVNHRVNV--------LYLDTTYCNPKY--KFPSKEDVLNYVVRLTKNCL 287
+QS P V R V ++LD T+ + +FPSK + V+ NC+
Sbjct: 127 LDCLQSLPEKYVGRRHGVAPKCCLDYIFLDCTFGKSSHSQRFPSKHSAIRQVI----NCI 182
Query: 288 KKQPKTLVV-VGAYSIGKESVFLAISKALGVKIYANAS 324
P VV + +G+E V L +S+ G KIY + +
Sbjct: 183 WNHPDAPVVYLACDMLGQEDVLLEVSRTFGSKIYVDKA 220
>gi|255577704|ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223530792|gb|EEF32657.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 543
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 141/327 (43%), Gaps = 38/327 (11%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNP 187
G PF+VD + S K +FLTH H DH G+ S+ PIY + LT L+ LL P
Sbjct: 8 GLPFSVDTWSPTS-KRKRHHFLTHAHKDHCSGILAHSSY-PIYATHLTKSLL---LLYFP 62
Query: 188 ----SYIHPLELNTEHVID----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
S +E+ VID VT +ANHCPGA + F G LHTGD R S
Sbjct: 63 QLEDSLFVGIEVGQSLVIDDPYGNFSVTAFDANHCPGAVMFLFEGSFGN-ILHTGDCRLS 121
Query: 240 -RLMQSYP---LLVNHR-----VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
+Q P + N + ++ ++LD T+ K PSK V+ NC+ K
Sbjct: 122 PECIQCLPKKYISKNGKEPRCQLDYVFLDCTFGRFHQKLPSKHSASQQVI----NCIWKH 177
Query: 291 PKTLVV-VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELS-GNLCTQGNDT 348
P +V + +G+E + +S+ G KIY + + F L+ + TQ +
Sbjct: 178 PAAAIVYLTCDLLGQEELLANVSRTFGSKIYVEKAANP--ECFHALTLTVPQILTQDPSS 235
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAA-VLAFRPTGWTYS---ETVGNQLDLIRPLS-- 402
HV + +E + + L RP+ Y+ E G + LS
Sbjct: 236 RFHVFNGFPMLYERAAAKVAEAQASFQPEPLIIRPSAQWYACEEEESGTESRRKLRLSEA 295
Query: 403 -RGNITIYGVPYSEHSSFTELREFVQV 428
R I+ V YS HSS EL F+Q+
Sbjct: 296 VRDQFGIWHVCYSMHSSREELEWFLQL 322
>gi|410337689|gb|JAA37791.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 151/332 (45%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ YFL+H H H GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RPYFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL + Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSRKYRFWKKQIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ Y + +YLDT C+P+ Y+ PS+E+ L+ V+
Sbjct: 129 G-TVLYTGDFRLVQGEAARMELLYSGGRVKDIQSVYLDTMLCDPRFYQIPSREECLSGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVQSWITRSLYRVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|58380350|ref|XP_310480.2| AGAP000597-PA [Anopheles gambiae str. PEST]
gi|55243186|gb|EAA06670.2| AGAP000597-PA [Anopheles gambiae str. PEST]
Length = 406
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 135/330 (40%), Gaps = 44/330 (13%)
Query: 122 FYKKIPGTP-FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS-HGPIYCSPLTARLV 179
F +P P +D F + +FL+H H DH GL GP+Y SP TA +V
Sbjct: 4 FPGTVPELPGIGIDRFDQPVRDRATLFFLSHCHVDHMQGLPDAAPLPGPLYVSPHTAVIV 63
Query: 180 ----------------RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR 223
++ L V P EL V + A HCPG+ + +F
Sbjct: 64 GLRHPQHTLVPVPVREQLNLTVRPPAGPAYELC---------VRTVPAEHCPGSVMFYFE 114
Query: 224 LQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYK-FPSKEDVLNYVVRL 282
+ + L+TGDFR S + R ++YLD+T+ + +Y FP ++ ++ +V L
Sbjct: 115 TKTVR-LLYTGDFRLSSASLTAIARYRVRPTIVYLDSTFLDRRYAYFPPRQASMDRIVEL 173
Query: 283 TKNCLKKQPKTLVVV-GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNL 341
L + +V + S G E +F ++ L +I+ A++R F L
Sbjct: 174 CSRWLAHDRRNVVALWPPASYGSEELFCQLADRLHQRIHVYAAQREPYNHFA--VLDHVF 231
Query: 342 CTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRP- 400
+H +L+ E KP VL RPT + +RP
Sbjct: 232 TDDAAGARIHACRGKTLEHERACRAAKPEEKHPDFVLTIRPTARRWCN--------LRPG 283
Query: 401 ---LSRGNITIYGVPYSEHSSFTELREFVQ 427
+G+ ++ V YS H+S TEL EF++
Sbjct: 284 EPFWQQGSGNLWYVCYSSHASSTELVEFLR 313
>gi|268569792|ref|XP_002640615.1| Hypothetical protein CBG08727 [Caenorhabditis briggsae]
Length = 533
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 38/249 (15%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K + G +VD F+ S C+ +FLTH H +H G+ ++ H +YCS TA+++ + +
Sbjct: 217 KIVIGDHISVDYFQQSS--KCNYHFLTHAHSEHCRGINAKFPH-KVYCSKETAKILNLIV 273
Query: 184 --LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFR--LQD---GQCYLHTGDF 236
+ I PL+LN + + +VT ++ANHCPGA + F+ L D G L TGDF
Sbjct: 274 GEPLPEDTIQPLDLNIPYKFENFQVTAIDANHCPGAVMFVFQGPLIDEIAGGPILCTGDF 333
Query: 237 RAS----RLMQSYPL--LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
RA R ++ L + + +YLD TY + F S+E +L + +
Sbjct: 334 RAEASYMRQFENEKLGWVKDISFARIYLDNTYFSVDVAFTSRE----ISEQLLQKEIMNH 389
Query: 291 PKTLVVVGAYSIGKESVF-----------------LAISKALGVKI-YANASRRRVLQSF 332
P +V+ + +G+E + LAI K LG Y A+++R +Q
Sbjct: 390 PDADIVLPLHQLGQERIIENLSYRIYEPIFVYPEKLAIGKVLGFFYEYGIANQKRQIQVV 449
Query: 333 DWPELSGNL 341
+ E+ L
Sbjct: 450 EKREMPDAL 458
>gi|296206188|ref|XP_002750100.1| PREDICTED: protein artemis [Callithrix jacchus]
Length = 692
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 37/223 (16%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ AYFL+H H DH GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RAYFLSHCHKDHMKGLRAPALKRRLECSLKVCLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL +P Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR ++ + L++ + +YLDTT+ +P+ ++ PS+E+ L+ ++
Sbjct: 129 G-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFFDPRFFQIPSREECLSGIL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
L + + + P +V + + G E +F +S+ G++++ +
Sbjct: 188 ELVGSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGIQVHVD 230
>gi|260814123|ref|XP_002601765.1| hypothetical protein BRAFLDRAFT_215154 [Branchiostoma floridae]
gi|229287067|gb|EEN57777.1| hypothetical protein BRAFLDRAFT_215154 [Branchiostoma floridae]
Length = 387
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 145/308 (47%), Gaps = 37/308 (12%)
Query: 146 AYFLTHFHYDHYGGLG--------KRWSHGPIYCSPLTARLVRMCLLVNP--SYIHPLEL 195
A+FL+H H DH GL K +YCS +T L+ P YI +++
Sbjct: 28 AFFLSHAHRDHMVGLDNPGFLSRLKASLKTRLYCSDITKALLLTEKQFKPLEPYIVSVQI 87
Query: 196 NTEH---VIDGVK-------VTLLEANHCPGAALIHFRLQDGQCYLHTGDFR-----ASR 240
+T V D V VTLL+A HCPG+ + F +G L+TGDFR A++
Sbjct: 88 DTPTSLTVTDEVTGKEHSLLVTLLQAGHCPGSVMFLFEGLEGTV-LYTGDFRLPVGGAAQ 146
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKF-PSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
+ + LY+DTT+ P+ K+ PS+ED ++ + ++ + K +V +
Sbjct: 147 FQHLHQGDRLKDIQSLYVDTTFLVPEAKYIPSREDCCTALINVVQSWISKGAHYVVRMNC 206
Query: 300 YS-IGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSL 358
+ G E +F+ + + +K++ N V Q+ PE+ L + ++T +H
Sbjct: 207 KAKYGYEYLFIELCRRFNMKVHVNDP--SVYQAI--PEIFQCLTSDPSETQIHACRYQKG 262
Query: 359 KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSS 418
+ Y P ++ V++ P+ ++ G D+IR SR + + V +S HSS
Sbjct: 263 RHPLPCKYRPPPPHEL-EVMSVTPSTMWFTAYAGPG-DVIRKGSRHH---HRVCFSFHSS 317
Query: 419 FTELREFV 426
+TE+R+FV
Sbjct: 318 YTEIRDFV 325
>gi|336268785|ref|XP_003349155.1| hypothetical protein SMAC_06991 [Sordaria macrospora k-hell]
gi|380089485|emb|CCC12584.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 607
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 110/236 (46%), Gaps = 43/236 (18%)
Query: 133 VDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCLLVNP--- 187
VD FRY + + A L+H H DH GL S P +YCS T ++ V+
Sbjct: 16 VDFFRYHPNRRPPLACLLSHVHTDHLAGLDTLRS--PFVYCSAATREILLSLETVSRRIN 73
Query: 188 -----------SYIH------------PLELNTEHVIDGVKVTLLEANHCPGAALIHFRL 224
SY H P+EL E + ++VTLL+ANHCPGA + F
Sbjct: 74 YAQGTLEARQLSYKHLKNLLKPLPLDTPVELELEPG-NHIQVTLLDANHCPGAVMFLFEG 132
Query: 225 QDGQCYLHTGDFRAS----RLMQSYPLLVNHRVNVLYLDTTYCNPKY----KFPSKEDVL 276
Q G+ L+TGD R+ + P +V + + LDT Y + + KFP+K +
Sbjct: 133 Q-GKAALYTGDIRSEPWHVNAIARSPSMVQYAYGLKTLDTIYLDTSFIEDIKFPTKAQGI 191
Query: 277 NYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
+ L + K P T+ A++ G E V++A+SKALG K++ + + + QS
Sbjct: 192 S---ELLEKVSKYPPDTMFHFQAWTYGYEDVWVALSKALGSKVHVDEYKMGIYQSL 244
>gi|218189475|gb|EEC71902.1| hypothetical protein OsI_04671 [Oryza sativa Indica Group]
Length = 642
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 134/321 (41%), Gaps = 28/321 (8%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG----PIYCSPLTARL-VRMC 182
G PF VD + S + FLTH H DH G G +Y + LT L +R
Sbjct: 8 GLPFAVDTWGPSSRRR-RHRFLTHAHRDHLVAAGGAADSGECPGAVYATRLTLDLALRHF 66
Query: 183 LLVNPSYIHPLELNTEHVID----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
+ +E+ V+D VT +ANHCPGA + F Q G LHTGD R
Sbjct: 67 PRLERGEFVEMEVGKTVVVDDPAGAFSVTAYDANHCPGAVMFLFEGQFGS-ILHTGDCRL 125
Query: 239 S-RLMQSYPLLVNH--------RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK 289
+ +Q+ PL R++ ++LD T+ K PSKE + V+ C+ K
Sbjct: 126 TPDCVQNLPLKYIAKKGKENICRLDFVFLDCTFSKCFLKLPSKESAIQQVI----ACIWK 181
Query: 290 QPKT-LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPEL-SGNLCTQGND 347
P V + +G E + + +S+ G KIY + +RR F L + + T+
Sbjct: 182 HPHAPFVYLACDLLGHEEILIEVSRTFGSKIYVD--KRRNSDCFRALSLIAPEIITEDPS 239
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNIT 407
+L +L + + + + L RP+ Y+ +Q +
Sbjct: 240 CRFQILGFQNLYDKACTNIEEARASLQPEPLFIRPSTQWYAHCAQSQKPSLTEAVLDGCG 299
Query: 408 IYGVPYSEHSSFTELREFVQV 428
++ + +S HSS EL + +++
Sbjct: 300 VWHICFSIHSSRDELEQALEL 320
>gi|385862192|ref|NP_001245374.1| DNA cross-link repair 1C [Sus scrofa]
Length = 762
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 28/177 (15%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTEHVI----------DGVKVTLLEAN 212
+YCSP+T L LL NP Y I +E+ T I + + VTLL A
Sbjct: 109 LYCSPVTREL----LLTNPRYRFWEKRIVSIEVETPTQISLIDEAPGEKEEIVVTLLPAG 164
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK- 266
HCPG+ + F+ +G L+TGDFR A+R+ + + +YLDTT+C+PK
Sbjct: 165 HCPGSVMFLFQGNNG-TVLYTGDFRLAKGEAARMELLHSGGSVKDIQSVYLDTTFCHPKY 223
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
Y+ PS+E+ L ++ L ++ + + P +V + + G E +F +S+ GV+++ N
Sbjct: 224 YQIPSREECLRGILELVRSWITRSPYHVVWLNCKAAYGYEYLFANLSEEFGVQVHVN 280
>gi|225431465|ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
Length = 552
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 141/338 (41%), Gaps = 60/338 (17%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV-RMCLLVN 186
G PF+VD + S K +FLTH H DH G+ ++ PIY + LT L+ + ++
Sbjct: 8 GLPFSVDTWTPSSKKK-RHHFLTHAHKDHSSGISTHSAY-PIYSTHLTKTLILQQYPQLD 65
Query: 187 PSYIHPLELNTEHVIDG----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR-ASRL 241
S +E+ V+D VT +ANHCPGA + F G LHTGD R
Sbjct: 66 DSLFVGIEVGQSMVVDDPDGRFGVTAFDANHCPGAVMFLFEGDFGN-ILHTGDCRLIPEC 124
Query: 242 MQSYPLLV--------NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+Q+ P + + ++LD T+ PSK + V+ NC+ K P
Sbjct: 125 LQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVI----NCIWKHPDA 180
Query: 294 LVV-VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
+V + + +G+E + + +S+ G KI+ + + PE C Q L H+
Sbjct: 181 PIVYLCSDMLGQEEILINVSRIFGSKIFVDKANN--------PE-----CFQA---LTHM 224
Query: 353 LPM-----SSLKFETLKDYLK-----------PYGNQYAAVLAFRPTGWTYS------ET 390
+P S +F+ + + K N L RP+ Y+ +T
Sbjct: 225 VPEILSQDPSSRFQVFEGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKT 284
Query: 391 VGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
+ + R I+ V YS HSS EL +Q+
Sbjct: 285 ERRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQL 322
>gi|302770741|ref|XP_002968789.1| hypothetical protein SELMODRAFT_409901 [Selaginella moellendorffii]
gi|300163294|gb|EFJ29905.1| hypothetical protein SELMODRAFT_409901 [Selaginella moellendorffii]
Length = 186
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 53/194 (27%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190
F VD +R S AYFLTH H DH GL W GP+YCS C+L
Sbjct: 5 FVVDEWRSPS----DAYFLTHLHADHTEGLSADWCRGPLYCSQFG------CVL------ 48
Query: 191 HPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVN 250
H D FR + +C L + R L ++ +
Sbjct: 49 --------HTGD-------------------FRWNNDRCTL---EERKEALREA---IGG 75
Query: 251 HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLA 310
+V+ LYLD T+CNP + FPS+ V+ L ++ P+ +V+G ++GKE + L+
Sbjct: 76 AQVDFLYLDNTFCNPLFSFPSRNAAATRVIEL----IRGHPEKDIVIGIDNLGKEELLLS 131
Query: 311 ISKALGVKIYANAS 324
I++AL K++ + +
Sbjct: 132 IAQALETKVHLSVA 145
>gi|410214256|gb|JAA04347.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 151/332 (45%), Gaps = 52/332 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG----KRWSHGPI----YCSPLTARLVRMC 182
++D F +++ YFL+H H H GL KR + YCSP+T L
Sbjct: 14 ISIDRFDRENLRA-RPYFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKEL---- 68
Query: 183 LLVNPSY------IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQD 226
LL + Y I +E+ T I + + VTLL A HCPG+ + F+ +
Sbjct: 69 LLTSRKYRFWKKQIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNN 128
Query: 227 GQCYLHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVV 280
G L+TGDFR A+R+ + + +YLDT C+P+ Y+ PS+E+ L+ V+
Sbjct: 129 GTV-LYTGDFRLVQGEAARMELLHSGGRVKDIQSVYLDTMLCDPRFYQIPSREECLSGVL 187
Query: 281 RLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELS 338
L ++ + + +V + + G E +F +S+ LGV+++ N L F + PE+
Sbjct: 188 ELVQSWITRSLYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEIL 242
Query: 339 GNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQ 394
+L T N + H ++ L + +++ +P T W G +
Sbjct: 243 HHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGER 297
Query: 395 LDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 298 SRKTNVIVRTGESSYRACFSFHSSYSEIKDFL 329
>gi|290977182|ref|XP_002671317.1| hypothetical protein NAEGRDRAFT_59473 [Naegleria gruberi]
gi|284084885|gb|EFC38573.1| hypothetical protein NAEGRDRAFT_59473 [Naegleria gruberi]
Length = 739
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 25/227 (11%)
Query: 204 VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR-ASRLMQSYPLLVNHRVNVLYLDTTY 262
++V +++ANHCPG+ + G L TGDFR +R++Q+ P + +++ LYLD T+
Sbjct: 148 MQVNIIDANHCPGSIMFLLEGYFGNV-LFTGDFRYDARILQA-PCFRDKKIDHLYLDDTF 205
Query: 263 CNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
+ Y FP++++ V+ + K+ T +++ +GKE + LA++ I
Sbjct: 206 LDKMYDFPTRQEAGKQVISVIKSLPD---TTHILIAVDHLGKEELMLALATTFQTLIVVP 262
Query: 323 ASRRRVLQSF-DWPELSGNLC--TQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLA 379
R +L+ D + C QG + V + ++ ++ + +G A +
Sbjct: 263 EERYELLECMNDIIPIDLFTCDPKQGR---IFVKSKKEVNMRSIIEHKRIFG---ATTVG 316
Query: 380 FRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
P+GW+ ++ L P S+ IY VPYS HSS++E+ EFV
Sbjct: 317 IIPSGWSSAQ-------LKDPTSQ---LIYRVPYSLHSSYSEIIEFV 353
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR-LVRMCL 183
++P TP VD F+Y I GC Y LTH H DH GGL W++G I+CS +T R L++
Sbjct: 3 RLPNTPIIVDEFKY--IPGCFIYLLTHLHTDHTGGLTPSWNNGIIFCSEITKRLLLKKFQ 60
Query: 184 LVNPSYIHPLE 194
L P I LE
Sbjct: 61 LQEPERIIALE 71
>gi|242211498|ref|XP_002471587.1| predicted protein [Postia placenta Mad-698-R]
gi|220729359|gb|EED83235.1| predicted protein [Postia placenta Mad-698-R]
Length = 959
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 147/399 (36%), Gaps = 107/399 (26%)
Query: 121 PFYKKIPGTPFTVDAF--RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCS------ 172
PF IP P VD F YGS + + LTH H DH GL R G + CS
Sbjct: 6 PFDSFIPPYPIKVDNFCASYGSKPPSALHLLTHTHTDHLYGLSARSFSGQVICSRDAKEM 65
Query: 173 ---------------PLTARLVRMC--LLVNPSY--------------IHPLELNTEHVI 201
+ A R L V P I L L T I
Sbjct: 66 LLRHEVYGERALKDQDIRAEKTRTFAHLKVEPRVMQDGTLLFEGARDLIRTLPLYTPTTI 125
Query: 202 D-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----RLMQSYPLL---- 248
+ VK+TL +ANHCPGA + DG LHTGDFRA + + P L
Sbjct: 126 ELDDKKRVKLTLFDANHCPGAVMFLIEGDDG-AVLHTGDFRAEPWFLQSLMKNPFLQKYL 184
Query: 249 ---------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
V H + ++LDT P+K+ + ++ L CL P T
Sbjct: 185 APPPSCSGARRTHEDVLHTLEAIHLDTACLFSTLHVPTKDAATSGLMELM--CLLP-PTT 241
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL 353
L + A++ G E V AIS+ +I+ + + V + + N+ TQ
Sbjct: 242 LFFINAWTWGYEDVLKAISRTFRTRIHVDRYKFGVYKHLEGEPFLQNIITQD-------- 293
Query: 354 PMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS-----ETVGNQLDLIRP-------- 400
+S +F + + + + +V+A P T + G + + P
Sbjct: 294 -AASTRFHACERFDR---CNHVSVVAESPRNQTVAAGRSVNANGEHVVYVNPVTMGVAGW 349
Query: 401 ----------LSRGNITIY-GVPYSEHSSFTELREFVQV 428
L+RG I + VP S HS ELR+FV +
Sbjct: 350 DLYLKETRERLARGEIVNHLLVPLSRHSPLPELRDFVSL 388
>gi|401888595|gb|EJT52549.1| hypothetical protein A1Q1_03681 [Trichosporon asahii var. asahii
CBS 2479]
Length = 513
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
+TL+++G YSIGKE + A+G KIY N + ++L+ D PEL + T + +H
Sbjct: 307 RTLILIGTYSIGKERI------AIGAKIYCNPRKTQILKCEDDPELHDLMGTDPIECQIH 360
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYS 388
++P+S++ + L++YL + VLAFRPTGWT+S
Sbjct: 361 LVPLSNITLDNLEEYLATMHPHFNRVLAFRPTGWTFS 397
>gi|378732158|gb|EHY58617.1| DNA cross-link repair 1C protein [Exophiala dermatitidis
NIH/UT8656]
Length = 683
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 116/226 (51%), Gaps = 48/226 (21%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIH------------- 191
+AYFL+H H DH GL + +YCS T R++ + L P I+
Sbjct: 29 AAYFLSHVHSDHLLGL-ESVKMPFVYCSATTRRIL-LKLEKYPHRINFAKGILESRKQHY 86
Query: 192 ----------PLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQ-DGQCYLHTGDFR 237
PL ++TE + +KVTLL+ANHCPGA + F ++ DG+ L+TGD R
Sbjct: 87 RHLKTILRPLPLHVSTELELGPKSTIKVTLLDANHCPGAVM--FLIEGDGKAILYTGDIR 144
Query: 238 A-----SRLMQSYPLLVNH-----RVNVLYLDTTYCN---PKYKFPSKEDVLNYVVRLTK 284
A + ++Q+ P+++ + ++ +YLDTT+ + P +FP+K + L ++
Sbjct: 145 AEPWWVNSIVQN-PVILPYTCRLKTLDCIYLDTTFASHDEPYREFPTKAEGLKELLEKVG 203
Query: 285 NCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
C P T+ A+++G E V++A+S L +++ + + R+ +
Sbjct: 204 QC---SPDTIFYFRAWTLGYEDVWVALSNYLDSRVHVDDYQLRIFR 246
>gi|296088547|emb|CBI37538.3| unnamed protein product [Vitis vinifera]
Length = 558
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 141/338 (41%), Gaps = 60/338 (17%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV-RMCLLVN 186
G PF+VD + S K +FLTH H DH G+ ++ PIY + LT L+ + ++
Sbjct: 42 GLPFSVDTWTPSSKKK-RHHFLTHAHKDHSSGISTHSAY-PIYSTHLTKTLILQQYPQLD 99
Query: 187 PSYIHPLELNTEHVIDG----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR-ASRL 241
S +E+ V+D VT +ANHCPGA + F G LHTGD R
Sbjct: 100 DSLFVGIEVGQSMVVDDPDGRFGVTAFDANHCPGAVMFLFEGDFGN-ILHTGDCRLIPEC 158
Query: 242 MQSYPLLV--------NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+Q+ P + + ++LD T+ PSK + V+ NC+ K P
Sbjct: 159 LQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVI----NCIWKHPDA 214
Query: 294 LVV-VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
+V + + +G+E + + +S+ G KI+ + + PE C Q L H+
Sbjct: 215 PIVYLCSDMLGQEEILINVSRIFGSKIFVDKANN--------PE-----CFQA---LTHM 258
Query: 353 LPM-----SSLKFETLKDYLK-----------PYGNQYAAVLAFRPTGWTYS------ET 390
+P S +F+ + + K N L RP+ Y+ +T
Sbjct: 259 VPEILSQDPSSRFQVFEGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKT 318
Query: 391 VGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
+ + R I+ V YS HSS EL +Q+
Sbjct: 319 ERRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQL 356
>gi|296422781|ref|XP_002840937.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637164|emb|CAZ85128.1| unnamed protein product [Tuber melanosporum]
Length = 747
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 46/245 (18%)
Query: 133 VDAFRYGSIKGCS---AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV---------- 179
+D FR + G A FLTH H DH GL + IYCS T L+
Sbjct: 63 IDYFRQSNDSGARPALACFLTHIHSDHLQGLEGFYGGPFIYCSAATKELLIKLERRLHRF 122
Query: 180 ---------RMCLLVNPS---YIHPLELNTEHVI---DGVKVTLLEANHCPGAALIHFRL 224
R CL + PLE T I ++VTL +ANHCPGA +
Sbjct: 123 NLAKGVLEARRCLYAEKEKKLKVIPLETPTMVEIGSGKSLRVTLFDANHCPGAVMFLIE- 181
Query: 225 QDGQCYLHTGDFRASRL----MQSYPLLVNHRVNVLYLDTTYCNPKYK--------FPSK 272
DG+ L+TGD RA + ++ +P+LV + + + LD Y + + F SK
Sbjct: 182 GDGKAILYTGDIRAEKWWVDYLKRHPVLVPYAMGLKTLDKIYLDTSFAGRSKIHEVFRSK 241
Query: 273 EDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQS 331
+D ++ ++ + ++K P+ T+ + A++ G E ++A++ A KI+ + RR+
Sbjct: 242 QDGIHELL----SQVRKYPQDTIFHLNAWTFGYEEAWVALASAFDSKIHLSDYYRRLFHF 297
Query: 332 FDWPE 336
P+
Sbjct: 298 IRSPD 302
>gi|224034545|gb|ACN36348.1| unknown [Zea mays]
Length = 336
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 226 DGQCYLHTGDFR-------ASRLMQSY-PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLN 277
D C L+TGDFR A R Q L ++VLYLD TYC+P FP + V
Sbjct: 7 DLGCMLYTGDFRWELGCDEARRAKQDLLDALDGDTIDVLYLDNTYCHPSLNFPPRPVVAE 66
Query: 278 YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPEL 337
V+ + ++ P V++G ++GKE + L IS+AL KI+ R + + E
Sbjct: 67 QVI----DIIRSHPDHEVIIGVDTLGKEDLLLHISRALQTKIWVWPQRLQTIHLLGIDEN 122
Query: 338 SGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG----- 392
TQ + T + +P S+ + L + L + + P W SE
Sbjct: 123 RDIFTTQTSLTRIRAVPRYSVTIDNL-EALNTVCPTIGILPSAIPCLWKSSEGKAKSKGR 181
Query: 393 NQLDLIRPLSRG-----------------NITIYGVPYSEHSSFTELREFVQV 428
+ + IR RG + Y +PYSEH+ F+EL +F+
Sbjct: 182 SSVKSIRSSGRGEGLTEMDCNPLSPPKLFDKDSYTLPYSEHACFSELEDFMHT 234
>gi|391337548|ref|XP_003743129.1| PREDICTED: protein artemis-like [Metaseiulus occidentalis]
Length = 436
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 118/260 (45%), Gaps = 37/260 (14%)
Query: 122 FYKKIPGTP-FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG-------PIYCSP 173
F +IP P +D R+ AYFL+H H DH G+ IY SP
Sbjct: 4 FGGRIPQLPGLMID--RFEDDPDIRAYFLSHDHSDHQYGIDDPDLQSYIIKDSLKIYASP 61
Query: 174 LTARLVRMCLLVNPSY--IHPLELNTEH-VIDG-------VKVTLLEANHCPGAALIHFR 223
LT R++R + HPL L+ H ++ G V VTL A H G+ + F
Sbjct: 62 LTVRMLRNRRKFEELHDAFHPLPLDVPHKIVIGSSESAYPVTVTLTSAEHIVGSVMFVFE 121
Query: 224 LQDGQCY-LHTGDFRAS----RLMQSYPLLVNHR----VNVLYLDTTYCNPK--YKFPSK 272
+ + L+TGDFR S +L + + L HR + +Y D+T+C PK + P++
Sbjct: 122 RETPKFRCLYTGDFRLSKQDLKLKRCFKL---HRGLKPFDAIYFDSTWCTPKNLWNIPTR 178
Query: 273 EDVLNYVVRLTKNCLKKQPKTLVVV-GAYSIGKESVFLAISKALGVKIYANASRRRVLQS 331
E+VL YV L L++ + V Y +G E++ L +++ ++ R + +
Sbjct: 179 EEVLRYVEPLVNTHLQEDESNYICVYTMYDVGYENLLLDLARIADSAVHVTEERASLYKG 238
Query: 332 FDWPELSGNLCTQGNDTLLH 351
F P ++ L T+ + +H
Sbjct: 239 F--PGMTDILTTEPRNCRIH 256
>gi|398012340|ref|XP_003859364.1| hypothetical protein, conserved [Leishmania donovani]
gi|322497578|emb|CBZ32652.1| hypothetical protein, conserved [Leishmania donovani]
Length = 772
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 77/167 (46%), Gaps = 29/167 (17%)
Query: 125 KIPGTPFTVDAF------RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL 178
++ P +D F R S G +FLTHFH DH GL W+ G I S LT +L
Sbjct: 2 RVSSLPIIIDEFPALAGRRSHSGSGPELFFLTHFHTDHMKGLSSTWTAGFIITSTLTRQL 61
Query: 179 V------------------RMCLLVNPSYIHP-LELNTEHVIDGVKVTLLEANHCPGAAL 219
+ R +L + H + +T + V VTLL A H PG+A+
Sbjct: 62 LLNKFEGLRGRVLGLPFWCRTSVLSAAAAAHSETDSSTTTAVPVVYVTLLPAFHVPGSAM 121
Query: 220 IHFRLQDGQCYLHTGDFR----ASRLMQSYPLLVNHRVNVLYLDTTY 262
I+ G YLHTGDF+ A+++ +HRV+ LYLD T+
Sbjct: 122 IYIETPSGVTYLHTGDFKYTETAAQMSPLRTFFQSHRVDHLYLDDTW 168
>gi|296818323|ref|XP_002849498.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238839951|gb|EEQ29613.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 722
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 36/205 (17%)
Query: 133 VDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCLLVNPSYI 190
VD+FR + A FL+H H DH GL P IYCS T + P+ I
Sbjct: 10 VDSFRKNPERPAPLACFLSHVHSDHLAGLESL--RAPFIYCSTATREV--------PTEI 59
Query: 191 HPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR-LMQSY---P 246
+ NT +KVTL +ANHCPG+ + G+ L+TGD RA +QS P
Sbjct: 60 ELMPGNT------IKVTLFDANHCPGSVMFLIE-GAGKAILYTGDIRAEEWWVQSLVRNP 112
Query: 247 LLV-----NHRVNVLYLDTTYCNPK---YKFPSKEDVLNYVVRLTKNCLKKQPK-TLVVV 297
+L+ + R++ +YLDTT+ FPSK + + + L+K +K+ P TL +
Sbjct: 113 VLIPYTMGDSRLDNIYLDTTFATKSDIHQVFPSKAEGIQEL--LSK--VKEYPSDTLFYL 168
Query: 298 GAYSIGKESVFLAISKALGVKIYAN 322
+++ G E V+LA+S AL KI+ +
Sbjct: 169 RSWTFGYEDVWLALSTALNTKIHVD 193
>gi|115474405|ref|NP_001060799.1| Os08g0107600 [Oryza sativa Japonica Group]
gi|42408235|dbj|BAD09392.1| DNA ligase-like [Oryza sativa Japonica Group]
gi|113622768|dbj|BAF22713.1| Os08g0107600 [Oryza sativa Japonica Group]
gi|215767381|dbj|BAG99609.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 663
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL--LV 185
G PF VD + S FLTH H DH G+ + +Y S LT + L
Sbjct: 8 GLPFAVDTWTAASAVK-RHRFLTHAHRDHIAGITAT-NVAAVYASRLTILIACHIFPQLD 65
Query: 186 NPSYIHPLELNTEHVI---DG-VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241
+EL ++ DG VT +ANHCPGA + F LHTGD RL
Sbjct: 66 RADAFVEVELGAPVLVPDPDGDFTVTAFDANHCPGAVMFLFEGASFGRVLHTGD---CRL 122
Query: 242 MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV-VGAY 300
+ L + ++LD T+ FPSK+D + V+ NC+ K P VV + +
Sbjct: 123 TPDFRFLA---ADYVFLDCTFAACSLHFPSKDDSIRQVI----NCIWKHPNAPVVYLVSD 175
Query: 301 SIGKESVFLAISKALGVKIYANASR 325
+G+E + + +SK G KIY + +
Sbjct: 176 MLGQEEILMEVSKVFGSKIYVDRDK 200
>gi|322801376|gb|EFZ22037.1| hypothetical protein SINV_01264 [Solenopsis invicta]
Length = 715
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 129/259 (49%), Gaps = 37/259 (14%)
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK------RWSHGPIYCSPLT 175
F K+IPG +VD F G K SAYFL+H H DH GL + + + +YCS ++
Sbjct: 12 FIKEIPG--ISVDRFD-GKNKYSSAYFLSHCHTDHMQGLSQTFFEDLKQYNKFLYCSRIS 68
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVID--------GVKVTLLEANHCPGAALIHFRLQDG 227
+ + + ++++ +I+ + VT + A HCPG+ + F D
Sbjct: 69 KVFLDARYYGIETCVKDIDIDERVLIEYKNNGYNTNLFVTCISAGHCPGSVMFLFEKMD- 127
Query: 228 QCYLHTGDFRASRLMQSYPLLVN-----------HRVNVLYLDTTYCNPKY-KFPSKEDV 275
+ L+TGDFR + + Y +V+ + +YLDTT+ + + FP++++
Sbjct: 128 KLILYTGDFRIN--PRDYKKIVSLHYCNDFNTFPKKFAKMYLDTTFLDYNFIVFPTRKES 185
Query: 276 LNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-D 333
+N + + K L++ P+ +VV+ ++ G E +++ +SKAL + I+ + V +S+
Sbjct: 186 INKMGHVVKEWLEESPRNVVVLECSALYGSEFLYMELSKALNLSIHV---KNTVYESYCR 242
Query: 334 WPELSGNLCTQGNDTLLHV 352
P+L+ ++ T +H
Sbjct: 243 IPDLARHITNNPLATRIHA 261
>gi|146081028|ref|XP_001464168.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134068258|emb|CAM66545.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 772
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 77/167 (46%), Gaps = 29/167 (17%)
Query: 125 KIPGTPFTVDAF------RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL 178
++ P +D F R S G +FLTHFH DH GL W+ G I S LT +L
Sbjct: 2 RVSSLPIIIDEFPALAGRRSYSGSGPELFFLTHFHTDHMKGLSSTWTAGFIITSTLTRQL 61
Query: 179 V------------------RMCLLVNPSYIHP-LELNTEHVIDGVKVTLLEANHCPGAAL 219
+ R +L + H + +T + V VTLL A H PG+A+
Sbjct: 62 LLNKFEGLRGRVLGLPFWCRTSVLSAAAAAHSETDSSTTTAVPVVYVTLLPAFHVPGSAM 121
Query: 220 IHFRLQDGQCYLHTGDFR----ASRLMQSYPLLVNHRVNVLYLDTTY 262
I+ G YLHTGDF+ A+++ +HRV+ LYLD T+
Sbjct: 122 IYIETPSGVTYLHTGDFKYTETAAQMSPLRTFFQSHRVDHLYLDDTW 168
>gi|401417715|ref|XP_003873350.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489579|emb|CBZ24837.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 771
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 77/169 (45%), Gaps = 31/169 (18%)
Query: 125 KIPGTPFTVDAF------RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL 178
++P P +D F R GS G +FLTHFH DH GL W+ G I LT +L
Sbjct: 2 RVPSLPILIDEFPALAGRRSGS--GTELFFLTHFHTDHMKGLSSSWTTGLIITGTLTRQL 59
Query: 179 V-------RMCLLVNPSYIHPLELNTEHVIDG------------VKVTLLEANHCPGAAL 219
+ R +L P + L+ G V VTLL A H PG+A+
Sbjct: 60 LLNKFEGLRGRVLGLPFWCRTPVLSASGAAHGGRESAATTVAPVVYVTLLPAFHIPGSAM 119
Query: 220 IHFRLQDGQCYLHTGDFR-ASRLMQSYPLLV---NHRVNVLYLDTTYCN 264
I+ G YLHTGDF+ Q PL +HRV+ LYLD T+ +
Sbjct: 120 IYIETPSGVTYLHTGDFKYTETAAQVSPLRTFFQSHRVDHLYLDDTWLH 168
>gi|345483403|ref|XP_003424812.1| PREDICTED: protein artemis-like [Nasonia vitripennis]
Length = 396
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 148/338 (43%), Gaps = 48/338 (14%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH------GPIYCSPLTAR 177
++IPG ++D F G SA+FL+H H DH GL + H +YCS +T
Sbjct: 9 EEIPG--ISIDRFD-GDNLNSSAFFLSHGHTDHMKGLNYDFFHFLKRKDSFLYCSHITKL 65
Query: 178 LVR-------MCLLVNPSYIHPLELNTE--HVID--------GVKVTLLEANHCPGAALI 220
+V C++ H +++N + +VI+ + VT + + HCPG+ +
Sbjct: 66 IVENKFPKFDRCIIEK----HLIQINIDELNVINYVHCGTQVSITVTCVPSGHCPGSVMF 121
Query: 221 HFRLQDGQCYLHTGDFRAS----RLMQSYPLLVNH-----RVNVLYLDTTYCNPKYK-FP 270
D + L+TGDFR S ++S N +++ +YLDTT+ + ++ P
Sbjct: 122 LLNFGDKRI-LYTGDFRISIEDISKLKSLHYTTNSQRLPLQIDKIYLDTTFLDVDFQILP 180
Query: 271 SKEDVLNYVVRLTKNCLKKQPKTLVVVG-AYSIGKESVFLAISKALGVKIYANASRRRVL 329
S+ D L + + K ++K PK +V++ + G E +++ +SK L +I+ RV
Sbjct: 181 SRLDSLKKLAAVVKEWVEKDPKNVVLIEFSAKYGSEFLYMELSKMLNKRIHVKDDLYRVY 240
Query: 330 QSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSE 389
D L+ ++ T +H + + +P Q +L P+ ++
Sbjct: 241 SRLDI--LANHVTDIAESTSIHACMDKNASKKKKGLQCRPDVVQ-NNILTIIPSVMKWA- 296
Query: 390 TVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
G I V YS H+S+ E+ F+Q
Sbjct: 297 --GKDTSCIIEHDSIEAQTINVCYSTHASYREIEAFIQ 332
>gi|326482813|gb|EGE06823.1| DNA repair protein [Trichophyton equinum CBS 127.97]
Length = 763
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 116/246 (47%), Gaps = 59/246 (23%)
Query: 133 VDAFR-YGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLT--------------- 175
VD+FR + A FL+H H DH GL P +YCS T
Sbjct: 10 VDSFRKHPEWPAPLACFLSHVHSDHLVGLESL--RAPFVYCSAATREILLRIEKYPHRMN 67
Query: 176 ----------------ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAAL 219
A+L+R L P+ I + NT ++VTL +ANHCPG+ +
Sbjct: 68 FAKGILESRKQHYKHLAKLLRPIPLRVPTEIELMPGNT------IRVTLFDANHCPGSVM 121
Query: 220 IHFRLQDGQCYLHTGDFRA-SRLMQSY---PLLV-----NHRVNVLYLDTTYCNPK---Y 267
DG+ L+TGD RA S +QS P+L+ + R++ +YLDTT+
Sbjct: 122 FLIE-GDGKAILYTGDIRAESWWVQSLIRNPVLIPYTMGDRRLDTIYLDTTFATKSDIHQ 180
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYANASRR 326
FPSK + + + L+K +K P+ T+ + +++ G E V+LA+S ALG KI+ + +
Sbjct: 181 VFPSKAEGIREL--LSK--IKGYPEDTIFYLRSWTFGYEDVWLALSAALGTKIHVDRYQY 236
Query: 327 RVLQSF 332
R+ S
Sbjct: 237 RLYNSL 242
>gi|326474617|gb|EGD98626.1| hypothetical protein TESG_06106 [Trichophyton tonsurans CBS 112818]
Length = 763
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 116/246 (47%), Gaps = 59/246 (23%)
Query: 133 VDAFR-YGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLT--------------- 175
VD+FR + A FL+H H DH GL P +YCS T
Sbjct: 10 VDSFRKHPEWPAPLACFLSHVHSDHLVGLESL--RAPFVYCSAATREILLRIEKYPHRMN 67
Query: 176 ----------------ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAAL 219
A+L+R L P+ I + NT ++VTL +ANHCPG+ +
Sbjct: 68 FAKGILESRKQHYKHLAKLLRPIPLRVPTEIELMPGNT------IRVTLFDANHCPGSVM 121
Query: 220 IHFRLQDGQCYLHTGDFRA-SRLMQSY---PLLV-----NHRVNVLYLDTTYCNPK---Y 267
DG+ L+TGD RA S +QS P+L+ + R++ +YLDTT+
Sbjct: 122 FLIE-GDGKAILYTGDIRAESWWVQSLIRNPVLIPYTMGDRRLDTIYLDTTFATKSDIHQ 180
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYANASRR 326
FPSK + + + L+K +K P+ T+ + +++ G E V+LA+S ALG KI+ + +
Sbjct: 181 VFPSKAEGIREL--LSK--IKGYPEDTIFYLRSWTFGYEDVWLALSAALGTKIHVDRYQY 236
Query: 327 RVLQSF 332
R+ S
Sbjct: 237 RLYNSL 242
>gi|113676970|ref|NP_001038566.1| protein artemis [Danio rerio]
gi|71153323|sp|Q5RGE5.1|DCR1C_DANRE RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein
Length = 639
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 46/214 (21%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPI-------------YCSPLTARLVRMCLLVNPSY--- 189
AYFL+H H DH GL GP+ YCS +T L LL NP Y
Sbjct: 28 AYFLSHCHKDHMKGLK-----GPLLKRKLKFSLTVKLYCSYVTKEL----LLSNPRYAFW 78
Query: 190 ---IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
I PLEL++ I + V VTLL A HCPG+ + F G L+TGDF
Sbjct: 79 EDHIVPLELDSPTSISLIDESTGETEDVVVTLLSAGHCPGSVMFLFEGAKGTV-LYTGDF 137
Query: 237 R-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQ 290
R A+R+ + + +Y+DTT+ +PK Y+ PS+E L + +L ++ + +
Sbjct: 138 RLAVGDAARMEYLHSGDRVKDIQSVYIDTTFFDPKYYQIPSREACLAGIQQLVQDWICQS 197
Query: 291 PKTLVVVGAYSI-GKESVFLAISKALGVKIYANA 323
P +V + + G E +F + + +I+ N+
Sbjct: 198 PYHVVWLNCKAAYGYEYLFTNLGQEFNSQIHVNS 231
>gi|332027906|gb|EGI67961.1| Protein artemis [Acromyrmex echinatior]
Length = 348
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 154/337 (45%), Gaps = 59/337 (17%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK------RWSHGPIYCSPLTAR 177
K+IPG +VD F ++ S YFL+H H DH GL + + +YCS +T
Sbjct: 9 KEIPG--ISVDRFDRENMNS-SVYFLSHCHIDHMCGLNNMFFDHLKQYNKYLYCSHITKV 65
Query: 178 LVRMCLLVN----PSYIHPLELNTEHVI-----------DGVKVTLLEANHCPGAALIHF 222
+ N +Y+ +E++ + I D + VT A HCPG+ + F
Sbjct: 66 FLENKYYENLRNVETYVKDIEVDKKVCIEYRSNYNSEETDILFVTFTSAGHCPGSVMFVF 125
Query: 223 RLQDGQCYLHTGDFRAS----RLMQS-----YPLLVNHRVNVLYLDTTYCNPKYKF-PSK 272
+ + L+TGDFR + R ++S +P + + +YLDTT+ + + P++
Sbjct: 126 E-KMNKLILYTGDFRINPKDYRKIKSLNCNDFP----KKFDNIYLDTTFLGHDFAYLPTR 180
Query: 273 EDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQS 331
+ +N + ++ K L + P+ +V++ ++ G E +++ +S++L I+ + V S
Sbjct: 181 IESINVMCKVVKEWLDESPRKVVILECSALYGSEFLYMKLSESLKTLIHV---KECVYNS 237
Query: 332 F-DWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSET 390
+ PEL+ ++ D +H MS +D +L P+ +
Sbjct: 238 YIRIPELACHVTNNPLDARIHAC-MSKYVCMNRQD-----------ILTIVPSVKKWK-- 283
Query: 391 VGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
G+ ++ + + V YS H+SF EL++F+Q
Sbjct: 284 -GHDTSVVGEWDKFREKTFNVCYSTHASFDELKKFIQ 319
>gi|367040249|ref|XP_003650505.1| hypothetical protein THITE_48711 [Thielavia terrestris NRRL 8126]
gi|346997766|gb|AEO64169.1| hypothetical protein THITE_48711 [Thielavia terrestris NRRL 8126]
Length = 630
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 31/223 (13%)
Query: 133 VDAFR-YGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSP---------LTARLVRMC 182
VD FR + ++ A FL+H H DH GL S P+ P L AR+ R
Sbjct: 16 VDYFRPHPELRPPLACFLSHIHSDHLAGLESLRS--PLLRYPCRINYANGILEARIQRYR 73
Query: 183 LLVNPSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
L N + P+ L+T +++ ++VTLL+ANHCPGA + F +G+ L+TGD R
Sbjct: 74 HLRN--LLKPIPLDTPTLLELEPGNHIQVTLLDANHCPGAVMFLFE-GNGKAVLYTGDVR 130
Query: 238 AS----RLMQSYPLLVNHRVNVLYLDTTYCNPKY----KFPSKEDVLNYVVRLTKNCLKK 289
+ + P L+ + + LDT Y + + +FP+K + +V L + +
Sbjct: 131 SEPWFVNSLARSPSLIEYSSGLKTLDTIYLDTSFLDNIEFPTKAE---GIVELLQKVSRY 187
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
T+ A++ G E V++A+SK L KI+ + + + +S
Sbjct: 188 PADTIFHFQAWTYGYEDVWIALSKFLQSKIHVDEYKMSMFRSL 230
>gi|8778278|gb|AAF79287.1|AC068602_10 F14D16.17 [Arabidopsis thaliana]
Length = 612
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 128 GTPFTVDAF-RYGSIKGCSAY-FLTHFHYDHYGGLG-KRWSHGPIYCSPLT-ARLVRMCL 183
G PF VD F Y K + FLTH H DH G+ PIY + LT + L++
Sbjct: 71 GLPFAVDTFGPYTETKRRKRHHFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFP 130
Query: 184 LVNPSYIHPLELNTEHVIDG----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
++ SY +E+ ++D KVT +ANHCPGA + F G LHTGD R +
Sbjct: 131 QLDESYFVRVEIGQSVIVDDPDGEFKVTAFDANHCPGAVMFLFEGSFGN-ILHTGDCRLT 189
Query: 240 R----------LMQSYPLLVNHRVNVLYLDTTYCNPKY--KFPSKEDVLNYVVRLTKNCL 287
+ +S+ + + ++LD T+ + +FP+K + ++ NC+
Sbjct: 190 LDCLHSLPEKYVGRSHGMKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQII----NCI 245
Query: 288 KKQPKTLVV-VGAYSIGKESVFLAISKALGVKIYANAS 324
P VV + +G+E V L +S+ G KIY + +
Sbjct: 246 WNHPDAPVVYLACDMLGQEDVLLEVSRTFGSKIYVDKA 283
>gi|92096533|gb|AAI15305.1| Dclre1c protein [Danio rerio]
Length = 639
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 46/214 (21%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPI-------------YCSPLTARLVRMCLLVNPSY--- 189
AYFL+H H DH GL GP+ YCS +T L LL NP Y
Sbjct: 28 AYFLSHCHKDHMKGLK-----GPLLKRKLKFSLTVKLYCSYVTKEL----LLSNPRYAFW 78
Query: 190 ---IHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
I PLEL++ I + V VTLL A HCPG+ + F G L+TGDF
Sbjct: 79 EDHIVPLELDSPTNISLIDESTGETEDVVVTLLSAGHCPGSVMFLFEGAKGTV-LYTGDF 137
Query: 237 R-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQ 290
R A+R+ + + +Y+DTT+ +PK Y+ PS+E L + +L ++ + +
Sbjct: 138 RLAVGDAARMEYLHSGDRVKDIQSVYIDTTFFDPKYYQIPSREACLAGIQQLVQDWICQS 197
Query: 291 PKTLVVVGAYSI-GKESVFLAISKALGVKIYANA 323
P +V + + G E +F + + +I+ N+
Sbjct: 198 PYHVVWLNCKAAYGYEYLFTNLGQEFSSQIHVNS 231
>gi|121702877|ref|XP_001269703.1| hypothetical protein ACLA_030100 [Aspergillus clavatus NRRL 1]
gi|119397846|gb|EAW08277.1| hypothetical protein ACLA_030100 [Aspergillus clavatus NRRL 1]
Length = 792
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 116/232 (50%), Gaps = 47/232 (20%)
Query: 131 FTVDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--------RM 181
FTVD FR + A FL+H H DH GL + + IYCS T ++ RM
Sbjct: 33 FTVDYFRKNPDRPPPLACFLSHVHSDHLQGL-ESFRAPFIYCSAATREMLLRIEKYPHRM 91
Query: 182 CL---LVNPSYIH---------PLELNTEHVID-----GVKVTLLEANHCPGAALIHFRL 224
++ +H P+ LNT I+ ++VTL +ANHC GA + F +
Sbjct: 92 NFSKGILESRRLHYKHLSRLLRPIPLNTPTEIELTPLLSIRVTLFDANHCAGAVM--FLI 149
Query: 225 Q-DGQCYLHTGDFRAS----RLMQSYPLLVNH-----RVNVLYLDTTYCNPKY---KFPS 271
+ DG L+TGD RA + +P+L+ + R++ +Y+DTT+ + FPS
Sbjct: 150 EGDGNAILYTGDIRAEPWWVNSLIRHPVLIPYTLCGKRLDKIYIDTTFARANHVCPSFPS 209
Query: 272 KEDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYAN 322
K + L+ ++++ +++ P+ T+ A++ G E V++A+S L KI+ +
Sbjct: 210 KAEGLSELLQM----VERYPQDTVFYFRAWTFGYEDVWVALSARLNSKIHVD 257
>gi|254443838|ref|ZP_05057314.1| DNA ligase N terminal domain family [Verrucomicrobiae bacterium
DG1235]
gi|198258146|gb|EDY82454.1| DNA ligase N terminal domain family [Verrucomicrobiae bacterium
DG1235]
Length = 765
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 22/189 (11%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSY-IH----PLELN 196
K + F++H H+DH G H I CSP TA+L+R + + + IH P EL
Sbjct: 24 KPVARSFVSHAHFDHMG------KHEEILCSPPTAQLIRQRIPGDRKWSIHEFGEPFELE 77
Query: 197 TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVL 256
G K L A H G++++ +DG+ +L+TGDF+ + + + P +V+ L
Sbjct: 78 P-----GTKACLYPAGHIVGSSMLWLE-KDGESFLYTGDFKLTPGISAEPC-QPVQVDTL 130
Query: 257 YLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK-ESVFLAISKA- 314
++TTY P+Y FP + +V ++R + L+ T V+ G YS+GK +S+ +++ A
Sbjct: 131 IIETTYGLPRYTFPPENEVYADIIRFCRETLENG-DTPVLFG-YSLGKSQSILRSLTDAK 188
Query: 315 LGVKIYANA 323
L V ++ A
Sbjct: 189 LEVMLHPTA 197
>gi|21554701|gb|AAM63664.1| unknown [Arabidopsis thaliana]
Length = 545
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 128 GTPFTVDAF-RYGSIKGCSAY-FLTHFHYDHYGGLG-KRWSHGPIYCSPLT-ARLVRMCL 183
G PF VD F Y K + FLTH H DH G+ PIY + LT + L++
Sbjct: 4 GLPFAVDTFGPYTETKRRKRHHFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFP 63
Query: 184 LVNPSYIHPLELNTEHVIDG----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
++ SY +E+ ++D KVT +ANHCPGA + F G LHTGD R +
Sbjct: 64 QLDESYFVRVEIGQSVIVDDPDGEFKVTAFDANHCPGAVMFLFEGSFGN-ILHTGDCRLT 122
Query: 240 R----------LMQSYPLLVNHRVNVLYLDTTYCNPKY--KFPSKEDVLNYVVRLTKNCL 287
+ +S+ + + ++LD T+ + +FP+K + ++ NC+
Sbjct: 123 LDCLHSLPEKYVGRSHGMKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQII----NCI 178
Query: 288 KKQPKTLVV-VGAYSIGKESVFLAISKALGVKIYANAS 324
P VV + +G+E V L +S+ G KIY + +
Sbjct: 179 WNHPDAPVVYLACDMLGQEDVLLEVSRTFGSKIYVDKA 216
>gi|18394685|ref|NP_564070.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
gi|332191672|gb|AEE29793.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
Length = 549
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 128 GTPFTVDAF-RYGSIKGCSAY-FLTHFHYDHYGGLG-KRWSHGPIYCSPLT-ARLVRMCL 183
G PF VD F Y K + FLTH H DH G+ PIY + LT + L++
Sbjct: 8 GLPFAVDTFGPYTETKRRKRHHFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFP 67
Query: 184 LVNPSYIHPLELNTEHVIDG----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
++ SY +E+ ++D KVT +ANHCPGA + F G LHTGD R +
Sbjct: 68 QLDESYFVRVEIGQSVIVDDPDGEFKVTAFDANHCPGAVMFLFEGSFGN-ILHTGDCRLT 126
Query: 240 R----------LMQSYPLLVNHRVNVLYLDTTYCNPKY--KFPSKEDVLNYVVRLTKNCL 287
+ +S+ + + ++LD T+ + +FP+K + ++ NC+
Sbjct: 127 LDCLHSLPEKYVGRSHGMKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQII----NCI 182
Query: 288 KKQPKTLVV-VGAYSIGKESVFLAISKALGVKIYANAS 324
P VV + +G+E V L +S+ G KIY + +
Sbjct: 183 WNHPDAPVVYLACDMLGQEDVLLEVSRTFGSKIYVDKA 220
>gi|20161430|dbj|BAB90354.1| DNA ligase-like [Oryza sativa Japonica Group]
gi|21952820|dbj|BAC06236.1| DNA ligase-like [Oryza sativa Japonica Group]
gi|125572866|gb|EAZ14381.1| hypothetical protein OsJ_04301 [Oryza sativa Japonica Group]
Length = 698
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 134/325 (41%), Gaps = 40/325 (12%)
Query: 130 PFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG----PIYCSPLTARL-VRMCLL 184
PF VD + S + FLTH H DH G G +Y + LT L +R
Sbjct: 10 PFAVDTWGPSSRRR-RHRFLTHAHRDHLVAAGGAADSGECPGAVYATRLTLDLALRHFPR 68
Query: 185 VNPSYIHPLELNTEHVID----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS- 239
+ +E+ V+D VT +ANHCPGA + F Q G LHTGD R +
Sbjct: 69 LERGEFVEMEVGKTVVVDDPAGAFSVTAYDANHCPGAVMFLFEGQFGS-ILHTGDCRLTP 127
Query: 240 RLMQSYPLLVNH--------RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
+ + PL R++ ++LD T+ K PSKE + V+ C+ K P
Sbjct: 128 DCVHNLPLKYIAKKGKENICRLDFVFLDCTFSKCFLKLPSKESAIQQVI----ACIWKHP 183
Query: 292 KT-LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPEL-SGNLCTQGNDTL 349
V + +G E + + +S+ G KIY + +RR F L + + T+
Sbjct: 184 HAPFVYLACDLLGHEEILIEVSRTFGSKIYVD--KRRNSDCFRALSLIAPEIITEDPSCR 241
Query: 350 LHVLPMSSL------KFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSR 403
+L +L K E + L+P L RP+ Y+ +Q +
Sbjct: 242 FQILGFQNLYDKACTKIEEARASLQPEP------LFIRPSTQWYAHCAQSQKPSLTEAVL 295
Query: 404 GNITIYGVPYSEHSSFTELREFVQV 428
++ + +S HSS EL + +++
Sbjct: 296 DGCGVWHICFSIHSSRDELEQALEL 320
>gi|348542062|ref|XP_003458505.1| PREDICTED: protein artemis-like [Oreochromis niloticus]
Length = 626
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 46/214 (21%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPI-------------YCSPLTARLVRMCLLVNP----- 187
AYFL+H H DH GL GP+ YCS +T L LL NP
Sbjct: 28 AYFLSHCHKDHMKGL-----KGPLLKRKLQFSRTVRLYCSFVTKEL----LLNNPKYAFW 78
Query: 188 -SYIHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
YI PLEL + I + V VTLL A HCPG+ + F G L+TGDF
Sbjct: 79 EEYIVPLELESPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFEGSHGNV-LYTGDF 137
Query: 237 R-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQ 290
R SR+ + + +YLD+T+ +P+ Y+ PS+E L+ + L + +
Sbjct: 138 RLPVGDVSRMEHLHSGSRVKDIQSIYLDSTFYDPRFYQIPSREVCLSGISELVGKWIIQS 197
Query: 291 PKTLVVVGAYSI-GKESVFLAISKALGVKIYANA 323
P +V + + G E +F+ + + +I+ N
Sbjct: 198 PHHVVWLNCKAAYGYEYLFINLGEEFNTQIHVNT 231
>gi|410918675|ref|XP_003972810.1| PREDICTED: LOW QUALITY PROTEIN: protein artemis-like [Takifugu
rubripes]
Length = 649
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 140/325 (43%), Gaps = 67/325 (20%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGP-------------IYCSPLTARLVRMCLLVNPSYIH- 191
AYFL+H H DH GL GP +YCS +T L LL +P Y
Sbjct: 28 AYFLSHCHKDHMKGL-----KGPALKRKLQFSRTVRLYCSFVTKEL----LLSSPRYAFW 78
Query: 192 -----PLELNTEHVIDGVK----------VTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
PLEL + I V+ VTLL A HCPG+ + F G L+TGDF
Sbjct: 79 EEYTVPLELESPTQISLVEETTGEKEDLVVTLLSAGHCPGSVMFLFEGSQGTV-LYTGDF 137
Query: 237 R-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQ 290
R SR+ + + +YLD+T+ +P+ Y+ P++E LN ++ L N + +
Sbjct: 138 RISAGDISRMEHLHSGSRVKDIQSIYLDSTFYDPRFYRIPTRETCLNGIMELVGNWISQS 197
Query: 291 PKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLCTQGNDT 348
+V + + G E +F + K +I+ N L F P++ L T T
Sbjct: 198 SYHVVWLNCKAAYGYEYLFTHLGKRFNTEIHVNX-----LTMFKKMPDILSYLTT-NRRT 251
Query: 349 LLHVL--PMSSLKFETLKDYLKPYGNQYA-----AVLAFRPTGWTYSETVGNQLDLIRPL 401
+H P S F + + P G A +++ +P+ + E +I
Sbjct: 252 QIHACRHPRSEDFFPSSR---LPCGCTAADGTPLRIISIKPSTIWFGERTKKTNVII--- 305
Query: 402 SRGNITIYGVPYSEHSSFTELREFV 426
+ + + +S HSSF+EL++F+
Sbjct: 306 -KTGASSFRACFSFHSSFSELKDFL 329
>gi|443695471|gb|ELT96369.1| hypothetical protein CAPTEDRAFT_147464 [Capitella teleta]
Length = 265
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 38/213 (17%)
Query: 145 SAYFLTHFHYDHYGGLGK-----RWSHGP---IYCSPLTARLV----RMCLLVNPSYIHP 192
SAYFL+H H DH GL R S +YCSP+T L+ R L+ +I
Sbjct: 27 SAYFLSHKHADHMLGLSNSSFAYRLSSNKNIRLYCSPVTKALLSFDSRYSGLM--PFIVA 84
Query: 193 LELNTEHVID---------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR--ASRL 241
L+L+ +V+ V VTLL A HCPG+ + F G L+TGDFR +
Sbjct: 85 LDLDVPNVLRINNPQSDKYEVTVTLLSAAHCPGSVMFLFEGNQGTV-LYTGDFRLCVQDV 143
Query: 242 MQSYPLLVNHR-------VNVLYLDTTYCNPKYKF-PSKEDVLNYVVRLTKNCLKKQPKT 293
MQ L H+ + LY+DTT+C P+ F PS+++ ++ V+ + + + P
Sbjct: 144 MQMDAL---HQAPGKPKTLTSLYIDTTFCVPQALFIPSRQECVSAVLDIMQEWFDESPNH 200
Query: 294 LV-VVGAYSIGKESVFLAISKALGVKIYANASR 325
V ++ ++G E +F+ K G+ ++ + +R
Sbjct: 201 CVFILHKANLGYEHLFMEACKHFGMPVHVDEAR 233
>gi|312384994|gb|EFR29591.1| hypothetical protein AND_01303 [Anopheles darlingi]
Length = 265
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 23/260 (8%)
Query: 122 FYKKIPGTP-FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG-KRWSHGPIYCSPLTARLV 179
F IP P +D F + SA+FL+H H DH GL GP++ SP++ +
Sbjct: 4 FPGVIPELPGIAIDRFEPEQRQRASAFFLSHCHTDHMRGLELDDVLPGPLFLSPVSGVFI 63
Query: 180 R----------MCLLVNPSY---IHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQD 226
R + + IHP E E + V + A HCPG+ + F
Sbjct: 64 RHRFPQHAPRVRTMAIGEQLTLTIHPAEPGEEEY--ELTVRSIAAEHCPGSVMFFFETTT 121
Query: 227 GQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYK-FPSKEDVLNYVVRLTKN 285
+ L+TGDFR S+ + ++ + R ++YLD+T+ N Y FP++ + +V L
Sbjct: 122 ERI-LYTGDFRLSQGHGNTSVIRSLRPQIVYLDSTFLNQDYNHFPTRIESTEKIVALCSE 180
Query: 286 CLKKQPKTLVVVGAYS-IGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQ 344
L + + V + + G E +FL+I + + KI+ + +R L F P LS + T
Sbjct: 181 WLAEDKRNRVSLWLPAHCGSEDLFLSIYERMQEKIHVSEKQRAPLLHF--PALS-EVLTD 237
Query: 345 GNDTLLHVLPMSSLKFETLK 364
+H ++ ++ +K
Sbjct: 238 DTTVRIHACQGTATRWRPIK 257
>gi|384246171|gb|EIE19662.1| hypothetical protein COCSUDRAFT_19473 [Coccomyxa subellipsoidea
C-169]
Length = 168
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 19/150 (12%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190
TVD ++ + A FLTH H DH GL W+ P+YCS T L+ L+ P +
Sbjct: 15 LTVDYWKRSATNVLWA-FLTHAHADHLQGLSDTWTGAPLYCSSATRELL---LVRWPDFR 70
Query: 191 HP---LELNTEHVIDG--------VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
P LEL+ ++ V+VT L ANHC GA + F G+ LH GDFR
Sbjct: 71 APLISLELDETVILRAATPYGHATVQVTPLNANHCLGAVMFLFEGPFGRV-LHCGDFRWE 129
Query: 240 RLMQS---YPLLVNHRVNVLYLDTTYCNPK 266
+ Q +P+L + ++VLYLD TY +P+
Sbjct: 130 QEYQKENLHPILTSAPLDVLYLDNTYAHPR 159
>gi|145348221|ref|XP_001418554.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578783|gb|ABO96847.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 182
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR-WS----HGPIYCSPLT---------- 175
T+D + S A+F TH H DH GLG+R WS G I+C+ +T
Sbjct: 19 VTIDFWAPTSATNVRAHFCTHAHADHVVGLGRRGWSPARAGGKIFCTEITREVLVRRWPT 78
Query: 176 -ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTG 234
R R + P+ I L NT V VTL++A HCPG+A++ G+ LHTG
Sbjct: 79 LGRHARALEVGEPTAIR-LTANTT-----VTVTLIDAGHCPGSAMVLIDGPRGR-VLHTG 131
Query: 235 DFRASRLMQSYPL---LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL 282
DFR L + ++ LYLD TY +P FP + V+ L
Sbjct: 132 DFRREDFGTRAALPRCVTRAPIDALYLDNTYAHPTCVFPDRGSATAEVIAL 182
>gi|327298459|ref|XP_003233923.1| hypothetical protein TERG_05792 [Trichophyton rubrum CBS 118892]
gi|326464101|gb|EGD89554.1| hypothetical protein TERG_05792 [Trichophyton rubrum CBS 118892]
Length = 771
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 59/246 (23%)
Query: 133 VDAFR-YGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLT--------------- 175
VD FR + A FL+H H DH GL P +YCS T
Sbjct: 10 VDNFRKHPEWPAPLACFLSHVHSDHLVGLESL--RAPFVYCSAATREILLRIEKYPHRMN 67
Query: 176 ----------------ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAAL 219
A+L+R L P+ I + NT ++VTL +ANHCPG+ +
Sbjct: 68 FAKGILESRKQHYKHLAKLLRPIPLQVPTEIELMPGNT------IRVTLFDANHCPGSVM 121
Query: 220 IHFRLQDGQCYLHTGDFRASRL-MQSY---PLLV-----NHRVNVLYLDTTYCNPK---Y 267
DG+ L+TGD RA +QS P+L+ + R++ +YLDTT+
Sbjct: 122 FLIE-GDGKAILYTGDIRAEAWWVQSLIRNPVLIPYNMGDRRLDTIYLDTTFATKSDIHQ 180
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYANASRR 326
FPSK + + + L+K +K P+ T+ + +++ G E V+LA+S ALG KI+ + +
Sbjct: 181 VFPSKAEGIREL--LSK--IKGYPEDTIFYLRSWTFGYEDVWLALSAALGTKIHVDRYQY 236
Query: 327 RVLQSF 332
R+ S
Sbjct: 237 RLYNSL 242
>gi|389641683|ref|XP_003718474.1| hypothetical protein MGG_00571 [Magnaporthe oryzae 70-15]
gi|351641027|gb|EHA48890.1| hypothetical protein MGG_00571 [Magnaporthe oryzae 70-15]
Length = 725
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 115/250 (46%), Gaps = 53/250 (21%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTA----RLVRMCLLVN- 186
VD FR ++ A FL+H H DH GL S P +YCS T RL R +N
Sbjct: 16 VDFFRNNGLRPPLACFLSHVHSDHLAGLESLRS--PFVYCSAATRELLLRLERYPCRINY 73
Query: 187 ---------PSYIH------PLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQD 226
+Y H P+ L+T I+ + VTLL+ANHC GA + F D
Sbjct: 74 AKGILEARVQTYKHLKNLLKPIPLDTPTQIELAPGKSIGVTLLDANHCTGAVMFLFE-GD 132
Query: 227 GQCYLHTGDFRAS----RLMQSYPLLVNHRVNV-----LYLDTTYCNPKYKFPSKEDVLN 277
G+ L+TGD R+ + P ++ + + +YLDT+ FPSK+ L
Sbjct: 133 GKAVLYTGDIRSEPWHVNSIARNPCMMEYSAGIKTLSRIYLDTSNTE-DIAFPSKDAGLK 191
Query: 278 YVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
++ LK PK T+ A++ G E V++A+SKAL I+ + + ++ +S
Sbjct: 192 ELLEK----LKSYPKDTIFHFKAWTFGYEDVWIALSKALDSPIHVDDYKMQLYRS----- 242
Query: 337 LSGNLCTQGN 346
L T+GN
Sbjct: 243 ----LVTKGN 248
>gi|373459939|ref|ZP_09551706.1| DNA ligase I, ATP-dependent Dnl1 [Caldithrix abyssi DSM 13497]
gi|371721603|gb|EHO43374.1| DNA ligase I, ATP-dependent Dnl1 [Caldithrix abyssi DSM 13497]
Length = 326
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 16/188 (8%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
F++H H DH H I C+P TA V+ + P++ P+E E + K++
Sbjct: 33 FVSHAHTDHLA------RHKKILCTPPTAEFVQQR--IKPTHYQPVEFGQELSVGDYKIS 84
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFR--ASRLMQSYPLLVNHRVNVLYLDTTYCNP 265
L A H G+A I + ++G L+TGDFR SR ++ + + + +VL ++TT+
Sbjct: 85 LHPAGHILGSAQIKIQ-KNGISLLYTGDFRLHPSRTVEPFEYV---QADVLIMETTFGQA 140
Query: 266 KYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASR 325
+Y+ PS+E+V + ++ K L K KT ++ AYS+GK L I + +
Sbjct: 141 RYRMPSREEVEDRLIDRCKTLLAKN-KTPIIF-AYSLGKGQEALKILTDAQIPVAVEEQI 198
Query: 326 RRVLQSFD 333
R + +++
Sbjct: 199 ARYVPTYE 206
>gi|393905092|gb|EFO18773.2| hypothetical protein LOAG_09723 [Loa loa]
Length = 620
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Query: 156 HYGGLGKRWSHGPIYCSPLTARLV------RMCLLVNPSYIHPLELNTEHVIDGVKVTLL 209
H L +W + IYCSP+TA+L+ R + +I PL+LN H ++G +V L+
Sbjct: 39 HCHKLTSKWQNNGIYCSPITAKLLSVISSRRKRYRILNKWIRPLDLNVWHKMNGFRVMLI 98
Query: 210 EANHCPGAALI----HFRLQDGQCYLHTGDFRA-SRLMQ---SYPLLVNHRVNVLYLDTT 261
+ANH PG+ ++ R G+ L+TG FRA +R Q + L + +V+ +D+
Sbjct: 99 DANHAPGSVMLIIEGEHRTTLGRI-LYTGFFRADTRFYQNVIALSALQEKKFDVICIDSN 157
Query: 262 YCN-PKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIY 320
Y + + ++P++ L + LK V + IG ES + IS+ L KI+
Sbjct: 158 YVDFTREEYPNRRSSAKEAANLLR-ILKYNGVDNVAIPVPIIGCESFLVNISRELKCKIW 216
Query: 321 ANASRRRVLQ 330
+ R + Q
Sbjct: 217 LHPERFEIAQ 226
>gi|398409002|ref|XP_003855966.1| hypothetical protein MYCGRDRAFT_65158, partial [Zymoseptoria
tritici IPO323]
gi|339475851|gb|EGP90942.1| hypothetical protein MYCGRDRAFT_65158 [Zymoseptoria tritici IPO323]
Length = 515
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 111/251 (44%), Gaps = 58/251 (23%)
Query: 133 VDAFRYGSIKG--CSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCLLVNPSY 189
+D FR +I G A FL+H H DH GL GP IYCSP T R LL Y
Sbjct: 16 IDHFRTNAISGRAVRACFLSHVHTDHLVGLESLSYQGPFIYCSPAT----REVLLRLEKY 71
Query: 190 IH------------------------PLELNTEHVID-----GVKVTLLEANHCPGAA-- 218
H P+ L T I+ ++VTL +ANHC GA
Sbjct: 72 PHRMNFANGILESRKQTFKHLKRLLKPVPLETPTWIELEPGRKIRVTLFDANHCVGAVMF 131
Query: 219 LIHFRLQDGQCYLHTGDFRASRL----MQSYPLL---VNH-------RVNVLYLDTTYCN 264
LI D + L+TGD R+ R + YP+L ++H R++++YLDTT+ N
Sbjct: 132 LIEGEGLDAKAVLYTGDIRSERWWVDSLSRYPVLNRYLSHFGKEPRKRLDMIYLDTTFAN 191
Query: 265 P--KYK-FPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYA 321
+Y+ FPSK + ++ L + T +++ G E V+ A+S +I+
Sbjct: 192 KTDRYQHFPSKAEGIS---ELLEKVSMYPRNTRFYFDSWTFGYEDVWQALSAHFNTQIHV 248
Query: 322 NASRRRVLQSF 332
+ + V +S
Sbjct: 249 DQFKYGVYRSL 259
>gi|452983046|gb|EME82804.1| hypothetical protein MYCFIDRAFT_109779, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 337
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 47/232 (20%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--------RMCLL 184
+D FR+ + A+FL+H H DH GL R + P++CSP T LV RM
Sbjct: 16 IDRFRHDPNRPALAHFLSHVHSDHLVGLESR-NAVPLHCSPATRELVLRLEKYPNRMNFA 74
Query: 185 ------VNPSYIH--------PLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDG 227
+Y H PLE TE ++ + ++VTL +ANHC GA + +G
Sbjct: 75 KGILESRKQTYKHLKTLLRPIPLETPTEIMLSPENTIRVTLFDANHCVGAVMFLIE-GNG 133
Query: 228 QCYLHTGDFRAS----RLMQSYPLLVNH----------RVNVLYLDTTYC--NPKYK-FP 270
+ L+TGD R+ + P L+ + +++ +YLDTT+ N +Y+ FP
Sbjct: 134 KAILYTGDIRSEPWWVNSICRQPTLLPYVCSGNSKPLRQLDNIYLDTTFASKNDRYRHFP 193
Query: 271 SKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
SK + + L + +K T + A++ G E V+ A+S LG +I+ +
Sbjct: 194 SKAEGIR---ELLEKVMKYPRDTEFYLDAWTFGYEDVWKALSAFLGSQIHVD 242
>gi|330935743|ref|XP_003305110.1| hypothetical protein PTT_17857 [Pyrenophora teres f. teres 0-1]
gi|311318056|gb|EFQ86823.1| hypothetical protein PTT_17857 [Pyrenophora teres f. teres 0-1]
Length = 2332
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 122/265 (46%), Gaps = 51/265 (19%)
Query: 116 VDRSCPFYKKIPGTPFTVDAFR-YGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSP 173
DR K+ P +D FR + K A FL+H H DH GL S P +YCS
Sbjct: 1656 TDRQKRNRKEFPR--IRIDYFRQHPECKPPLACFLSHVHSDHLAGLQSLRS--PFVYCSA 1711
Query: 174 LTARLV--------RMCLLV------NPSYIH---------PLELNTEHVI---DGVKVT 207
T ++ RM N +Y PL+ TE + + ++VT
Sbjct: 1712 ATKEILLRLEKFYYRMNFAKGILESRNVTYDRSMRKLAKALPLDTPTEIELAPGNNIRVT 1771
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRA-----SRLMQSYPLLV----NHRVNVLYL 258
L++ANHC GA + DG+ L+TGD RA + L+Q+ LL N R++ +YL
Sbjct: 1772 LIDANHCVGAVMFLIE-GDGKAVLYTGDIRAETWWVNSLVQNPVLLPYTLGNLRLDCMYL 1830
Query: 259 DTTYCN---PKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKAL 315
DTT+ P +FPSK + + L + T+ +++ G E+V++A+S L
Sbjct: 1831 DTTFATKKMPYREFPSKAEGIR---ELLSKVSEYSDDTIFYFHSWTFGYENVWIALSAFL 1887
Query: 316 GVKIYANASRRRV---LQSFDWPEL 337
G +I+ + R R+ L + D EL
Sbjct: 1888 GSQIHLDDYRARIYGSLSTLDRREL 1912
>gi|402590918|gb|EJW84848.1| hypothetical protein WUBG_04239 [Wuchereria bancrofti]
Length = 335
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 120/304 (39%), Gaps = 50/304 (16%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK-------RWSHGPIYCSPLTARLVRMCLL 184
+VD F +K SA+FL+H H DH GL + YC ++ ++ L
Sbjct: 15 SVDQFHSNDLKF-SAFFLSHCHSDHMHGLDDDQFYKLIKGKFAVFYCHKIS----KIFLG 69
Query: 185 VNPSY------IHPLELNTEHVIDGV---------------KVTLLEANHCPGAALIHFR 223
P Y I P N + + + VT L+A H PG+ +I F
Sbjct: 70 SEPHYARLLEHIVPKNYNEKFTVTAICDNEERESLLPSSSADVTFLDAQHIPGSIMILFE 129
Query: 224 LQDGQCYLHTGDFRASR--------LMQSYPLLVNHRVNVLYLDTTYCNPKYK-FPSKED 274
DG L+TGD+R S+ L Y R++ LY D+T+C + PS +
Sbjct: 130 FHDGFRLLYTGDYRLSKDDWIACDMLKDPYASSGFKRLDALYFDSTFCRRGAENIPSLKQ 189
Query: 275 VLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDW 334
V++ K L+K P V++ G E + AI L +K + + RV D+
Sbjct: 190 SCALCVKMVKEWLEKDPDNKVLIWCGRFGHELLLKAIWDELHLKCHVTMMKYRVYSKIDF 249
Query: 335 PELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQ 394
L+ + +T +H E + + V+A + ++ + V +
Sbjct: 250 --LAECITPIARNTRVHACTAKPTVMEEV------FFENKQNVIAKKKNDVSFKQKVKKK 301
Query: 395 LDLI 398
+D I
Sbjct: 302 MDFI 305
>gi|115390845|ref|XP_001212927.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193851|gb|EAU35551.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 694
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 46/233 (19%)
Query: 130 PFT-VDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV-------- 179
PF +D FR + A FL+H H DH GL + + IYCS T L+
Sbjct: 12 PFIQIDYFRKNPDRPAPLACFLSHVHSDHLQGL-ESFRAPFIYCSAATRDLLLRIEKYPH 70
Query: 180 RMCL---LVNPSYIH---------PLELNTEHVID-----GVKVTLLEANHCPGAALIHF 222
RM ++ +H P+ LNT VI+ ++VTLL+ANHC GA + F
Sbjct: 71 RMNFSKGILESRQLHYKHLSKLLRPIPLNTPTVIELTPRLSIRVTLLDANHCTGAVM--F 128
Query: 223 RLQ-DGQCYLHTGDFRAS----RLMQSYPLLV-----NHRVNVLYLDTTYCNPKY---KF 269
++ DG+ L+TGD RA + +P+L+ + R++ +YLD+T+ + F
Sbjct: 129 LIEGDGKAILYTGDIRAEPWWVNSLVRHPILLPYTLGSKRLDKIYLDSTFARASHIYRTF 188
Query: 270 PSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
PSK + L L + T+ A++ G E V++A+S L KI+ +
Sbjct: 189 PSKAEGL---AELLQKVASYPDDTVFYFRAWTFGYEEVWMALSAFLNSKIHVD 238
>gi|312382374|gb|EFR27857.1| hypothetical protein AND_04964 [Anopheles darlingi]
Length = 260
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 317 VKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAA 376
+K++ +R + L + P+ L +HVL M+ L ++ L DY+ + ++Y
Sbjct: 1 MKVWTEPNRWKALSAIADPDQLSLLVADPVAANIHVLAMNKLSYDELNDYMSQFPDRYDT 60
Query: 377 VLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
V+A RP+GW + +P RG I I G+ YSEHSSF EL+ FVQ
Sbjct: 61 VIALRPSGWEKNS---------KPQWRGRINIVGIEYSEHSSFDELKRFVQ 102
>gi|414879397|tpg|DAA56528.1| TPA: hypothetical protein ZEAMMB73_183608 [Zea mays]
Length = 629
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 131/317 (41%), Gaps = 22/317 (6%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDH-YGGLGKRWSHGPIYCSPLTARL-VRMCLLV 185
G PF VD + S FLTH H DH G G +Y + LT L +R +
Sbjct: 8 GLPFAVDTWGSSSRSR-RHRFLTHAHRDHLVGAGADIDGGGIVYATRLTLHLALRHFPQL 66
Query: 186 NPSYIHPLELNTEHVID----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS-R 240
+E+ V+D VT +ANHCPGA + F Q G LHTGD R +
Sbjct: 67 GSWEFVEMEVGRTLVVDDPVGAFSVTTYDANHCPGAVMFLFEGQFGT-ILHTGDCRLTPD 125
Query: 241 LMQSYPLLVNH--------RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
+Q+ P+ R++ ++LD T+ K PSK+ + +++ K
Sbjct: 126 CVQNLPMKYITKKGNENICRLDFVFLDCTFSKCFLKLPSKDSAIRQRLQVISCIWKHLHA 185
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSG-NLCTQGNDTLLH 351
V + +G E + + +S+ G KIY + R L F L+ + T + +
Sbjct: 186 PFVFLACDLLGHEDILVEVSRTFGTKIYVD----RKLDCFKALSLTAPEIITDDSSSRFQ 241
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV 411
++ L K+ + N L RP+ Y+ + + + + I+ V
Sbjct: 242 MVGFHQLHDRASKELAEARANLQPEPLFIRPSTQWYATCARSPKPSLTEAEQDELGIWHV 301
Query: 412 PYSEHSSFTELREFVQV 428
+S HSS EL + +Q+
Sbjct: 302 CFSIHSSRDELEQALQL 318
>gi|171185767|ref|YP_001794686.1| beta-lactamase domain-containing protein [Pyrobaculum neutrophilum
V24Sta]
gi|170934979|gb|ACB40240.1| beta-lactamase domain protein [Pyrobaculum neutrophilum V24Sta]
Length = 315
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 134/307 (43%), Gaps = 43/307 (14%)
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCSAYFL-THFHYDHYGGLGKRWSHGPIYCSPLTARLVR 180
Y + G F VD G IKG + L TH H DH R+ P+ + T +
Sbjct: 9 IYVEGRGVRFVVDPV--GPIKGRVDFVLITHGHSDHISRYALRY---PVVATRETLAAMS 63
Query: 181 MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
+ L P+ + +DGV+V +LEA H G+ + + DG L TGDF
Sbjct: 64 VRLGAAPARRITVAAGRVVEVDGVEVAVLEAGHILGSVMYLVEV-DGLQALFTGDFNTVG 122
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
+ + V+VL ++ TY +P Y FP++ +V N ++ L + + V + AY
Sbjct: 123 TILTDAAEPVENVDVLVMEATYGDPAYVFPNRAEVYNELLDLVE---RHSGDGGVAIAAY 179
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF 360
+GK +++ LG + A+A+ R ++ + T G V+ + SL++
Sbjct: 180 PLGKAQ---EVARLLGHRAGAHAAVARYNRAL-------GISTGGGR---EVVIVPSLRW 226
Query: 361 ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFT 420
+ Y++ +GW Y+E + R L G +YG+P S+HS F
Sbjct: 227 AP-RGYVR-----------VEVSGW-YAEEEARR----RALREG---VYGIPLSDHSDFP 266
Query: 421 ELREFVQ 427
L +F Q
Sbjct: 267 NLVQFAQ 273
>gi|70990712|ref|XP_750205.1| DNA repair protein [Aspergillus fumigatus Af293]
gi|66847837|gb|EAL88167.1| DNA repair protein, putative [Aspergillus fumigatus Af293]
Length = 760
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 43/227 (18%)
Query: 131 FTVDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--------RM 181
VD FR + A FL+H H DH GL + + IYCS T L+ RM
Sbjct: 1 MVVDYFRKNPERPPPLACFLSHVHSDHLQGL-ESFRAPFIYCSAATRELLLRIEKYPHRM 59
Query: 182 CL---LVNPSYIH---------PLELNTEHVID-----GVKVTLLEANHCPGAALIHFRL 224
++ +H P+ L+T I+ ++VTLL+ANHC GA +
Sbjct: 60 NFSKGILESRRLHYKHLTKLLRPIPLDTPTEIELTPLLSIRVTLLDANHCAGAVMFLIE- 118
Query: 225 QDGQCYLHTGDFRASRL----MQSYPLLV-----NHRVNVLYLDTTYCNPKY---KFPSK 272
DG+ L+TGD RA R + +P+L+ + +++ +YLDTT+ + + FPSK
Sbjct: 119 GDGKAVLYTGDIRAERWWVNSLVRHPVLIPYTLGSKKLDKIYLDTTFASINHVCRSFPSK 178
Query: 273 EDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKI 319
+ L +++ + K +T+ A++ G E V++A+S L K+
Sbjct: 179 AEGLRELLQKVEAYPK---ETIFYFRAWTFGYEDVWIALSAFLNTKV 222
>gi|432944132|ref|XP_004083338.1| PREDICTED: protein artemis-like [Oryzias latipes]
Length = 639
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 141/319 (44%), Gaps = 55/319 (17%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLT-ARLVRM-C------LLVN-------PSYI 190
AYFL+H H DH GL GP+ L +R VR+ C LL+N YI
Sbjct: 28 AYFLSHCHKDHMKGL-----KGPLLKRKLQFSRTVRLYCSFVTKELLLNNQKYSFWEEYI 82
Query: 191 HPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR--- 237
PLEL + I + V VTLL A HCPG+ + F G L+TGDFR
Sbjct: 83 VPLELESPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFEGCRGNV-LYTGDFRLAV 141
Query: 238 --ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQPKTL 294
+R+ + + +Y+D+T+ +P+ Y+ PS+E L + L N + + P +
Sbjct: 142 GDVARMELLHSGSRVKDIQSVYVDSTFYDPRFYQIPSREVCLKGISELVGNWISQSPYHV 201
Query: 295 VVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLCTQGNDTLLHV 352
V + + G E +F + + G +I+ N+ L F PE+ + T +H
Sbjct: 202 VWLNCKAAYGYEYLFTNLGEEFGTQIHVNS-----LAMFKKMPEILSYVTTD-RSARIHA 255
Query: 353 LPMSSLKFETLKDYLKPYGNQYA-----AVLAFRPTGWTYSETVGNQLDLIRPLSRGNIT 407
+ E + P G A +++ +P+ + E +IR S +
Sbjct: 256 CRHPKDE-EFFQGNRLPCGCSAADGTPLRIISIKPSTMWFGERTKRTNVIIRTGS----S 310
Query: 408 IYGVPYSEHSSFTELREFV 426
Y +S HSS++EL++F+
Sbjct: 311 SYRACFSFHSSYSELKDFL 329
>gi|198419247|ref|XP_002126890.1| PREDICTED: similar to DNA cross-link repair 1C, PSO2 homolog (S.
cerevisiae) isoform 2 [Ciona intestinalis]
Length = 403
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSP----LTARLVRMCLLVN 186
++D F G G ++FL+H H DH GL + C P T+ + + LL +
Sbjct: 14 LSIDRFD-GENLGSFSFFLSHCHTDHMVGLTHEAFKYKLKCQPDVKLFTSEVTKCLLLAD 72
Query: 187 PSYI--------------HPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLH 232
++ L + T+ +++ + VTLL A HCPG+ + F +G L+
Sbjct: 73 EKFLFLLPNIEVLLIEVPKLLRIKTKSIVEELTVTLLPAGHCPGSVMFLFEGAEGT-MLY 131
Query: 233 TGDFRASRLMQS-YPLLVNHRVNVLYLDTTYC-NPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
TGDFR S S P L N ++ +Y+DTT+C + P +E + ++++ + + +
Sbjct: 132 TGDFRLSHSSASRMPCLKNKVIDHIYVDTTFCIEEAWYIPPRELCVKNLLKIVQQWIVRG 191
Query: 291 PKTLVVVG-AYSIGKESVFLAISKALGVKIYANASR 325
+ +V + + G E + + K+ G KIY + ++
Sbjct: 192 NQYVVRLNMSAKYGYEYLIEELHKSFGEKIYCSRAK 227
>gi|198419249|ref|XP_002126836.1| PREDICTED: similar to DNA cross-link repair 1C, PSO2 homolog (S.
cerevisiae) isoform 1 [Ciona intestinalis]
Length = 395
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSP----LTARLVRMCLLVN 186
++D F G G ++FL+H H DH GL + C P T+ + + LL +
Sbjct: 14 LSIDRFD-GENLGSFSFFLSHCHTDHMVGLTHEAFKYKLKCQPDVKLFTSEVTKCLLLAD 72
Query: 187 PSYI--------------HPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLH 232
++ L + T+ +++ + VTLL A HCPG+ + F +G L+
Sbjct: 73 EKFLFLLPNIEVLLIEVPKLLRIKTKSIVEELTVTLLPAGHCPGSVMFLFEGAEGT-MLY 131
Query: 233 TGDFRASRLMQS-YPLLVNHRVNVLYLDTTYC-NPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
TGDFR S S P L N ++ +Y+DTT+C + P +E + ++++ + + +
Sbjct: 132 TGDFRLSHSSASRMPCLKNKVIDHIYVDTTFCIEEAWYIPPRELCVKNLLKIVQQWIVRG 191
Query: 291 PKTLVVVG-AYSIGKESVFLAISKALGVKIYANASR 325
+ +V + + G E + + K+ G KIY + ++
Sbjct: 192 NQYVVRLNMSAKYGYEYLIEELHKSFGEKIYCSRAK 227
>gi|157866374|ref|XP_001681893.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125192|emb|CAJ03154.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 775
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 76/171 (44%), Gaps = 31/171 (18%)
Query: 125 KIPGTPFTVDAF--------RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
++P P +D F GS G +FLTHFH DH GL W+ G I +T
Sbjct: 2 RVPSLPIIIDEFPALAGSRSHSGSGSGSELFFLTHFHTDHMKGLSSAWTAGLIITGTITR 61
Query: 177 RLV------------------RMCLLVNPSYIHP-LELNTEHVIDGVKVTLLEANHCPGA 217
+L+ R +L H + T + V VTLL A H PG+
Sbjct: 62 QLLLNKFEGLRGRVLGLPFWCRTPVLSAAGAAHSETDSTTATAVPVVHVTLLPAFHIPGS 121
Query: 218 ALIHFRLQDGQCYLHTGDFR----ASRLMQSYPLLVNHRVNVLYLDTTYCN 264
A+I+ G YLHTGDF+ A+++ +HRV+ LYLD T+ +
Sbjct: 122 AMIYIETPSGVTYLHTGDFKYTEAAAQMSSLRTFFQSHRVDHLYLDDTWLH 172
>gi|159130682|gb|EDP55795.1| DNA repair protein, putative [Aspergillus fumigatus A1163]
Length = 549
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 43/230 (18%)
Query: 131 FTVDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--------RM 181
VD FR + A FL+H H DH GL + + IYCS T L+ RM
Sbjct: 1 MVVDYFRKNPERPPPLACFLSHVHSDHLQGL-ESFRAPFIYCSAATRELLLRIEKYPHRM 59
Query: 182 CL---LVNPSYIH---------PLELNTEHVID-----GVKVTLLEANHCPGAALIHFRL 224
++ +H P+ L+T I+ ++VTLL+ANHC GA +
Sbjct: 60 NFSKGILESRRLHYKHLTKLLRPIPLDTPTEIELTPLLSIRVTLLDANHCAGAVMFLIE- 118
Query: 225 QDGQCYLHTGDFRASRL----MQSYPLLV-----NHRVNVLYLDTTYCNPKY---KFPSK 272
DG+ L+TGD RA R + +P+L+ + +++ +YLDTT+ + + FPSK
Sbjct: 119 GDGKAVLYTGDIRAERWWVNSLVRHPVLIPYTLGSKKLDKIYLDTTFASINHVCRSFPSK 178
Query: 273 EDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
+ L +++ + K +T+ A++ G E V++A+S L K++ +
Sbjct: 179 AEGLRELLQKVEAYPK---ETIFYFRAWTFGYEDVWIALSAFLNTKVHID 225
>gi|154334022|ref|XP_001563266.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060278|emb|CAM45688.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 809
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 76/177 (42%), Gaps = 37/177 (20%)
Query: 125 KIPGTPFTVDAF-------RYGSIKGCSA-------YFLTHFHYDHYGGLGKRWSHGPIY 170
++P P +D F R S G + +FL+HFH DH GL W+ G I
Sbjct: 33 RVPSLPIVIDEFPALNGNRRRSSSTGVGSAAGDPELFFLSHFHTDHMKGLSSNWTAGVII 92
Query: 171 CSPLTARLV------------------RMCLLVNPSYIHPL-ELNTEHVIDGVKVTLLEA 211
LT L+ R +L H + + + V VTLL A
Sbjct: 93 TGILTRELLLSKFEGLRGRVLGLPFWCRTPVLSAAGTAHSTSDSSATTAVSVVYVTLLPA 152
Query: 212 NHCPGAALIHFRLQDGQCYLHTGDFR-ASRLMQSYPLLV---NHRVNVLYLDTTYCN 264
H PG+A+ F G YLHTGDF+ + Q+ PL +HRV+ LYLD T+ +
Sbjct: 153 FHIPGSAMFFFETPSGVTYLHTGDFKYTEAVAQASPLRTFFQSHRVDHLYLDDTWLH 209
>gi|242055193|ref|XP_002456742.1| hypothetical protein SORBIDRAFT_03g041750 [Sorghum bicolor]
gi|241928717|gb|EES01862.1| hypothetical protein SORBIDRAFT_03g041750 [Sorghum bicolor]
Length = 619
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 133/318 (41%), Gaps = 27/318 (8%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDH-YGGLGKRWSHGPIYCSPLTARL-VRMCLLV 185
G PF VD + S + FLTH H DH G G +Y + LT L +R +
Sbjct: 8 GLPFAVDTWG-PSARRRRHRFLTHAHRDHLVGAGADIDGGGTVYATRLTLHLALRHFPQL 66
Query: 186 NPSYIHPLELNTEHVID----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS-R 240
+E+ +D VT +ANHCPGA + F + G LHTGD R +
Sbjct: 67 GSWEFVEMEVGRTVELDDPTGAFSVTTYDANHCPGAVMFLFEGKFGT-ILHTGDCRLTPD 125
Query: 241 LMQSYPLLV-----NH---RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
+Q+ P+ N+ R++ ++LD T+ K PSKE + V+ +C+ K P
Sbjct: 126 CVQNLPMKYITKKGNNNICRLDFVFLDCTFSKCFLKLPSKESAIRQVI----SCIWKHPH 181
Query: 293 T-LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSG-NLCTQGNDTLL 350
V + +G E + + +S+ G KIY + L F L+ + T + +
Sbjct: 182 APFVFLACDLLGHEDILVEVSRTFGSKIYVDWR----LDCFKALSLTAPEIITDDSSSRF 237
Query: 351 HVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYG 410
++ L K+ N L RP+ Y+ Q + + I+
Sbjct: 238 QMVGFHQLYDRASKELAVARANLQPEPLFIRPSTQWYASCARKQKPSLTEAEQDEFGIWH 297
Query: 411 VPYSEHSSFTELREFVQV 428
V +S HSS EL + +Q+
Sbjct: 298 VCFSIHSSRDELEQALQL 315
>gi|317026030|ref|XP_001388784.2| DNA repair protein [Aspergillus niger CBS 513.88]
Length = 798
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 49/241 (20%)
Query: 122 FYKKIPGTPFTVDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV- 179
F ++ P +D FR + A FL+H H DH GL + + IYCS T ++
Sbjct: 7 FVREFPS--IQIDYFRKNPERPPPLACFLSHVHSDHLQGL-ESFRTPFIYCSAATREMLL 63
Query: 180 -------RMCL---LVNPSYIH---------PLELNTEHVID-----GVKVTLLEANHCP 215
RM ++ +H P+ LNT +D ++ TL +ANHC
Sbjct: 64 RIEKYPHRMNFSKGILESRKLHYKHLSKLLRPIPLNTPTELDLTPRLSIRATLFDANHCT 123
Query: 216 GAALIHFRLQ-DGQCYLHTGDFRAS----RLMQSYPLLV-----NHRVNVLYLDTTYCNP 265
GA + F ++ +G+ L+TGD RA + P+L+ N +++ +Y+D T+ P
Sbjct: 124 GAVM--FLIEGNGKAILYTGDIRAEPWWVNSIIRNPVLIPYTLGNKQLDNIYIDNTFARP 181
Query: 266 K---YKFPSKEDVLNYVVRLTKNCLKKQP-KTLVVVGAYSIGKESVFLAISKALGVKIYA 321
+ FPSK + L ++ N ++ P +T + A++ G E V++A+S AL KI+
Sbjct: 182 SHVCHTFPSKAEGLKELL----NKIQAYPDRTTFYLRAWTFGYEEVWMALSAALNSKIHV 237
Query: 322 N 322
+
Sbjct: 238 D 238
>gi|294658312|ref|XP_460642.2| DEHA2F06534p [Debaryomyces hansenii CBS767]
gi|202953037|emb|CAG88974.2| DEHA2F06534p [Debaryomyces hansenii CBS767]
Length = 783
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 120/271 (44%), Gaps = 43/271 (15%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCL 183
K+ PG VD R+ +I + Y LTH H DH GL + +YCS T +LV +
Sbjct: 18 KEFPG--LGVD--RFNTI--ANLYLLTHCHTDHLCGLRNKSFDSIVYCSETTKKLVAL-- 69
Query: 184 LVNPSYIH------PLELNTEHVI----DGVKVTLLEANHCPGAALIHFRLQDG-QCYLH 232
+PS+ H P+E N I + + +TL+ A HCPGA + F L+ + L+
Sbjct: 70 --DPSFRHVLPFIIPIETNVPFTITLNGEEITMTLIPAYHCPGATM--FLLEGATKNILY 125
Query: 233 TGDFRA--------SRLMQSYPLLVNHRV-NVLYLDTTYC---NPKYKFPSKEDVLNYVV 280
TGD RA S+ +P +V + +YLDTT+ P + PS + ++ V
Sbjct: 126 TGDIRAESWWVETLSKCPSLFPYTAGLKVLDNIYLDTTFIYRGEPFIEIPSNNEGISVVT 185
Query: 281 RLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGN 340
L K+ + P + G E + I+ +L ++ + + ++S D +
Sbjct: 186 SLIKSYPRDDPDVQFYFVDSTSGFEEAWAQIANSLQGTLHTSEENKLRIESLD----CNH 241
Query: 341 LCTQGNDTLLHVLPMSS----LKFETLKDYL 367
L T L H++ S LKF YL
Sbjct: 242 LYTHYGHVLNHLINKQSNSRNLKFHACGKYL 272
>gi|156053902|ref|XP_001592877.1| hypothetical protein SS1G_05799 [Sclerotinia sclerotiorum 1980]
gi|154703579|gb|EDO03318.1| hypothetical protein SS1G_05799 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1133
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 40/231 (17%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLV--------RMCLLV------NPSYI 190
AYFL+H H DH GL P +YCS T ++ R+ L +Y
Sbjct: 30 AYFLSHVHSDHLVGLDNDRVKLPFVYCSAATKEILIRLEKRRDRLNLAQGILEKEERTYK 89
Query: 191 H------PLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
H P+ L+T +I+ V+VTL +ANHC GA + F ++ L+TGD R+
Sbjct: 90 HLKNVLKPVPLDTPTLIELAPKNEVRVTLFDANHCTGAVMFLFE-RENTAVLYTGDIRSE 148
Query: 240 ----RLMQSYPLLVNH-----RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
+ P L+ + ++ +YLDT+ P +FP+K + L L K
Sbjct: 149 PWFVNNLTRNPFLIEYTSGMKTLDCIYLDTSNIGP-MEFPTKAEGLK---ELIGKVRKYP 204
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNL 341
P T A++ G E V+ A+S+ L +I+ + + ++ +S +G L
Sbjct: 205 PNTKFHFAAWTFGYEEVWAALSRTLDSQIHVDKYKIKLYESLRQEGSNGQL 255
>gi|448103590|ref|XP_004200073.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
gi|359381495|emb|CCE81954.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
Length = 714
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 24/194 (12%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV---RMCLLVNPSYIHPLELNTEHVID- 202
Y LTH H DH GL KR G +YCS +T +L+ R C N Y+ P++ N +VI+
Sbjct: 25 YILTHSHTDHLLGLRKRSFDGLVYCSDITKKLIEIKRPCFASN--YLIPIQYNRRYVINL 82
Query: 203 ---GVKVTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFRAS----RLMQSYPLLVNH--- 251
+ +T++ + HCPG+++ F L++ + L TGD R +++ L +
Sbjct: 83 STGRLSLTMIPSYHCPGSSM--FLLENSRHRVLITGDIRGEDWWLEELKTNSFLRPYISG 140
Query: 252 --RVNVLYLDTTYC---NPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKES 306
R++ +YLDTT+ P PS D +N +V KN P+ G E
Sbjct: 141 TLRLDNIYLDTTFSYRGEPYIDIPSNYDGINLLVEQLKNYPLDDPEIQFYFLDSVTGIEE 200
Query: 307 VFLAISKALGVKIY 320
V+ I K G I+
Sbjct: 201 VWAFIVKEFGGSIH 214
>gi|448524461|ref|XP_003868993.1| Pso2 DNA cross-link repair protein [Candida orthopsilosis Co
90-125]
gi|380353333|emb|CCG26089.1| Pso2 DNA cross-link repair protein [Candida orthopsilosis]
Length = 572
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 75/156 (48%), Gaps = 25/156 (16%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV---- 179
++IPG VD F Y KG +FLTH H DH L G +YCS LT ++
Sbjct: 9 REIPGV--YVDNFSY---KG-GVFFLTHNHSDHLKSLLSNSFCGRVYCSQLTKDIIALDG 62
Query: 180 RMC----LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
R C LV Y P E+ T V VT+LE+ HCPG+ + F +G L TGD
Sbjct: 63 RYCDKLRYLVVKEYNKPFEIQT--FCTSVTVTMLESYHCPGSCMFLFECANGISCLATGD 120
Query: 236 FRASRLMQS--------YPLLVN-HRVNVLYLDTTY 262
RA + S +P + +++ +YLDTT+
Sbjct: 121 IRAEKWWVSSLIKNRYLFPYIAGLKKLDQIYLDTTF 156
>gi|367029759|ref|XP_003664163.1| hypothetical protein MYCTH_52175 [Myceliophthora thermophila ATCC
42464]
gi|347011433|gb|AEO58918.1| hypothetical protein MYCTH_52175 [Myceliophthora thermophila ATCC
42464]
Length = 578
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 19/145 (13%)
Query: 192 PLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----RLM 242
P+ LNT +++ ++VTLL+ANHCPGA + F Q G+ L+TGD RA +
Sbjct: 61 PIPLNTPTLLELEPENHLQVTLLDANHCPGAVMFLFEGQ-GKAVLYTGDVRAEPWFVNAI 119
Query: 243 QSYPLLVNHR-----VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
P L+ + ++ +YLDT++ + +FP+K + ++ ++R + T+ +
Sbjct: 120 ARSPSLIEYSSGLKTIDTIYLDTSFID-DVEFPTKSEGISELLR---KVSRYPSDTIFHL 175
Query: 298 GAYSIGKESVFLAISKALGVKIYAN 322
A++ G E V+LA+SKALG K++ +
Sbjct: 176 QAWTYGYEDVWLALSKALGSKVHVD 200
>gi|392868391|gb|EJB11487.1| DNA repair protein [Coccidioides immitis RS]
Length = 775
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 46/229 (20%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNP---------------SYI 190
A FL+H H DH GL S +YCS T R + +C+ P Y
Sbjct: 30 ACFLSHVHSDHLQGLESLRSPF-VYCSAAT-RKILLCIEKYPHRMNFAKGILETRKQEYK 87
Query: 191 H--------PLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
H PL + TE + ++VTL ANHCPGA + +G+ L+TGD RA
Sbjct: 88 HLAKLLRPIPLHVPTEIELTPGSTIRVTLFNANHCPGAVMFLIE-GNGKAILYTGDVRAE 146
Query: 240 ----RLMQSYPLLVNH-----RVNVLYLDTTYC---NPKYKFPSKEDVLNYVVRLTKNCL 287
+ P+L+ + R++ +YLDTT+ + FPSK + + ++ + +
Sbjct: 147 PWWVESLIRNPILIPYTLGDCRLDRIYLDTTFAIKSDIYSAFPSKAEGIKELL----HKV 202
Query: 288 KKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWP 335
K P+ T+ ++ G E V++A+S AL KI+ + + ++ QS P
Sbjct: 203 KAYPEDTIFYFRNWTFGYEDVWIALSAALNTKIHVDQYQLKLYQSLALP 251
>gi|195999584|ref|XP_002109660.1| hypothetical protein TRIADDRAFT_53902 [Trichoplax adhaerens]
gi|190587784|gb|EDV27826.1| hypothetical protein TRIADDRAFT_53902 [Trichoplax adhaerens]
Length = 440
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 59/320 (18%)
Query: 147 YFLTHFHYDHYGGL----------GKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELN 196
YFL+H H DH GL G+ S IYCS +T + L+ + +Y H L+L
Sbjct: 29 YFLSHLHQDHMKGLDSPAFRTHLNGRPKSR--IYCSEITKSI----LIKDANYSH-LKLF 81
Query: 197 TEHV--------------------IDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+ V I+ V VT L + HCPG+ + + G L+TGDF
Sbjct: 82 LQSVPTNDKIFIELQQTFDTSYTEIETVAVTFLPSGHCPGSMMFLLEGKHGN-ILYTGDF 140
Query: 237 RA---SRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQPK 292
R Y L ++ +YLDTT+C P+ P ++ + ++ + L +
Sbjct: 141 RMEGDEHKFMVYNYLSAITIDSVYLDTTFCLPEMMTIPKRKTITKQIINKIQQWLCQGTN 200
Query: 293 TLVVVGAYS-IGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
+V + + +G E + I+K L KI ++ + ++ + PE+ NL +T +H
Sbjct: 201 HVVCLRCRARLGYEYLLSEIAKKLKTKILVHSDQIKLYDNI--PEVRSNLTLVDKETKIH 258
Query: 352 VLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNIT---- 407
+ + L P ++ +L +P +++ + L +G T
Sbjct: 259 MCIRGRCRL--LSGPPTP-DSKKLKILRIKPCALSFAYN-------MEALKQGCFTRGAN 308
Query: 408 IYGVPYSEHSSFTELREFVQ 427
Y YS HSS E+ EF++
Sbjct: 309 FYSFLYSAHSSMAEIIEFLK 328
>gi|317144266|ref|XP_001820004.2| DNA repair protein [Aspergillus oryzae RIB40]
Length = 808
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 44/215 (20%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--------RMCL---LVNPSYIH--- 191
A FL+H H DH GL + + IYCS T L+ RM ++ +H
Sbjct: 30 AGFLSHVHSDHLQGL-ESFRAPFIYCSAATKELLLHIEKYPHRMNFSRGILESRRLHYKH 88
Query: 192 ------PLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQ-DGQCYLHTGDFRAS 239
P+ LNT I+ ++VTLL+ANHC GA + F ++ G+ L+TGD RA
Sbjct: 89 LSKLLRPIPLNTPTEIELNPRLSIRVTLLDANHCTGAVM--FLIEGSGKSILYTGDIRAE 146
Query: 240 RL----MQSYPLLV-----NHRVNVLYLDTTYCNPK--YK-FPSKEDVLNYVVRLTKNCL 287
+ +P+L+ R++ +YLD+T+ Y+ FPSK N + L +
Sbjct: 147 SWWVDSLIRHPVLIPYTLGGRRLDKIYLDSTFARHSSIYRTFPSK---ANGLAELLQKVA 203
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
T A++ G E V++A+S AL KI+ +
Sbjct: 204 SYSEDTTFYFRAWTFGYEEVWMALSAALNSKIHVD 238
>gi|346970779|gb|EGY14231.1| artemis protein [Verticillium dahliae VdLs.17]
Length = 657
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 42/222 (18%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTA----RLVRMCLLVN-------------- 186
A FL+H H DH GL S P +YCS T RL R +N
Sbjct: 30 ACFLSHVHSDHLAGLESLRS--PFVYCSAATREILLRLERYPCRINFAKGILEARVQTFK 87
Query: 187 --PSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ P+ L+T I+ ++VTL++ANHCPGA + DG+ L+TGD R+
Sbjct: 88 GLKGLLKPIPLDTPTEIELAPGHCIQVTLIDANHCPGAVMFLIE-GDGRAILYTGDIRSE 146
Query: 240 ----RLMQSYPLLVNH-----RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
+ P L+ + ++ +YLDT++ + F +K + + L +
Sbjct: 147 PWHVNSVARNPALIEYTHGIKTLDKIYLDTSFID-DVPFQTKAE---GIAELLGKVSRYP 202
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
P T+ + A++ G E V++A+SKAL +++ + + R+ S
Sbjct: 203 PDTIFHLQAWTYGYEDVWIALSKALKSRVHVDDYKMRIFSSL 244
>gi|225680684|gb|EEH18968.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 722
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 51/232 (21%)
Query: 133 VDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCLLVNPSYI 190
VD FR + A FL+H H DH GL P IYCS T R + + L P I
Sbjct: 10 VDYFRKNPKRPAPLACFLSHVHSDHLQGLESL--RAPFIYCSAAT-REILLRLEKRPHRI 66
Query: 191 H-----------------------PLELNTEHVI---DGVKVTLLEANHCPGAALIHFRL 224
+ PL++ TE + + V+VTL +ANHCPGA + F +
Sbjct: 67 NFSKGILESRRQHYKHLSKLLRPIPLQVPTEIELSPRNHVRVTLFDANHCPGAVM--FLI 124
Query: 225 Q-DGQCYLHTGDFRASRL----MQSYPLLV-----NHRVNVLYLDTTYCNPK---YKFPS 271
+ +G+ L+TGD RA + P+L+ + R++ +YLDTT+ FPS
Sbjct: 125 EGNGKTILYTGDIRAESWWVGNLIRNPVLIPYTLGDKRLDKIYLDTTFATKSDVYQSFPS 184
Query: 272 KEDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYAN 322
K + + ++ + P+ T+ + ++ G E ++LA+S AL KI+ +
Sbjct: 185 KAEGIRELLEK----INAYPEDTIFYLRVWTFGYEDIWLALSSALNTKIHVD 232
>gi|354548244|emb|CCE44981.1| hypothetical protein CPAR2_407840 [Candida parapsilosis]
Length = 562
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 25/156 (16%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRM-- 181
++IPG VD F Y KG +FLTH H DH GL + G ++CS LT ++ +
Sbjct: 12 REIPGV--CVDNFSY---KG-EVFFLTHCHSDHLNGLLENSFCGRVFCSQLTKDIIALDH 65
Query: 182 ------CLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
L+ Y P E+ T + VT+L+ HCPG+++ F +G L TGD
Sbjct: 66 RYNDILRFLIVKEYNEPFEVQT--FCSSMTVTMLKTYHCPGSSMFLFECTNGVSCLATGD 123
Query: 236 FRA-----SRLMQS---YPLLVNHR-VNVLYLDTTY 262
RA S L+Q+ +P + + ++ +YLDTT+
Sbjct: 124 IRAEKWWVSSLIQNRYIFPYITGLKTLDQIYLDTTF 159
>gi|350637985|gb|EHA26341.1| hypothetical protein ASPNIDRAFT_120082 [Aspergillus niger ATCC
1015]
Length = 774
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 47/227 (20%)
Query: 133 VDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--------RMCL 183
VD FR + A FL+H H DH GL + + IYCS T ++ RM
Sbjct: 10 VDYFRKNPERPPPLACFLSHVHSDHLQGL-ESFRTPFIYCSAATREMLLRIEKYPHRMNF 68
Query: 184 ---LVNPSYIH---------PLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQ- 225
++ +H P+ LNT +D ++ TL +ANHC GA + F ++
Sbjct: 69 SKGILESRKLHYKHLSKLLRPIPLNTPTELDLTPRLSIRATLFDANHCTGAVM--FLIEG 126
Query: 226 DGQCYLHTGDFRAS----RLMQSYPLLV-----NHRVNVLYLDTTYCNPK---YKFPSKE 273
+G+ L+TGD RA + P+L+ N +++ +Y+D T+ P + FPSK
Sbjct: 127 NGKAILYTGDIRAEPWWVNSIIRNPVLIPYTLGNKQLDNIYIDNTFARPSHVCHTFPSKA 186
Query: 274 DVLNYVVRLTKNCLKKQP-KTLVVVGAYSIGKESVFLAISKALGVKI 319
+ L ++ N ++ P +T + A++ G E V++A+S AL K+
Sbjct: 187 EGLKELL----NKIQAYPDRTTFYLRAWTFGYEEVWMALSAALNSKV 229
>gi|340514414|gb|EGR44677.1| predicted protein [Trichoderma reesei QM6a]
Length = 453
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIY-------CSPLTARLVRMCLLVNPSYIHPLELNTE 198
A FL+H H DH GL S P+Y L AR L I PL L +
Sbjct: 22 ACFLSHVHSDHLSGLETLRS--PLYPCRVNYALGILEARQQTYKHLSK--VIKPLPLESP 77
Query: 199 HVIDG-----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----RLMQSYPLLV 249
VI+ ++VTL +ANHCPG+ + Q G+ L+TGD R+ + P L+
Sbjct: 78 TVIELQPGKYIQVTLFDANHCPGSVMFLIEGQ-GKAILYTGDIRSEPWFVNAITRSPALI 136
Query: 250 NHRVNVLYLDTTYCNPKYK----FPSKEDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIGK 304
+ + LDT Y + + F +K + + ++R ++K PK T+ + +++ G
Sbjct: 137 EYTCGIKTLDTIYLDTSFTDDIPFQTKAEGIAELLRK----VQKYPKDTVFYLQSWTYGY 192
Query: 305 ESVFLAISKALGVKIYANASRRRVLQSFDWP 335
E V++A+SKAL I+ + + R+ S + P
Sbjct: 193 EDVWVALSKALNSPIHVDNYKLRIYNSLNTP 223
>gi|327350308|gb|EGE79165.1| DNA repair protein [Ajellomyces dermatitidis ATCC 18188]
Length = 764
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 112/240 (46%), Gaps = 47/240 (19%)
Query: 133 VDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTA----RLVRMCLLVN 186
VD FR + A FL+H H DH GL P IYCS T RL + +N
Sbjct: 10 VDYFRKNPDRPAPLACFLSHVHSDHLQGLESL--RAPFIYCSAATREILLRLEKYPHRIN 67
Query: 187 PS----------YIH--------PLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQ 225
S Y H PL++ TE + + V+VTL +ANHCPGA + F ++
Sbjct: 68 FSKGILESRKKHYKHLSKLLRPIPLQVPTEIELSPRNNVRVTLFDANHCPGAVM--FLIE 125
Query: 226 -DGQCYLHTGDFRASRL----MQSYPLLV-----NHRVNVLYLDTTYC---NPKYKFPSK 272
+ + L+TGD RA + +P+L+ + R++ +YLDTT+ N FPSK
Sbjct: 126 GNRKAILYTGDIRAESWWVDNLIRHPVLIPYTLGSKRLDKIYLDTTFATKSNVYQSFPSK 185
Query: 273 EDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
+ + L + TL + ++ G E V+LA+S AL +I+ + + V +S
Sbjct: 186 AEGIR---ELLEKIQTYPDSTLFYLRVWTFGYEDVWLALSAALNTRIHVDEYQMGVYRSL 242
>gi|85090777|ref|XP_958580.1| hypothetical protein NCU05966 [Neurospora crassa OR74A]
gi|28919953|gb|EAA29344.1| predicted protein [Neurospora crassa OR74A]
Length = 570
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 13/149 (8%)
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----RLMQSYPL 247
P+EL E + ++VTLL+ANHCPGA + F Q G+ L+TGD R+ + P
Sbjct: 68 PVELELE-PGNHIQVTLLDANHCPGAVMFLFEGQ-GKAALYTGDIRSEPWHVNAIARSPS 125
Query: 248 LVNHRVNVLYLDTTYCNPKY----KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIG 303
+V + + LDT Y + + +FP+K + L K PKT+ A++ G
Sbjct: 126 MVQYAYGLKTLDTIYLDTSFVEDIEFPTKA---RGISELLDKVSKYPPKTIFHFQAWTYG 182
Query: 304 KESVFLAISKALGVKIYANASRRRVLQSF 332
E V++A+SKAL +++ + + + QS
Sbjct: 183 YEDVWIALSKALQSRVHVDEYKMGIYQSL 211
>gi|357126195|ref|XP_003564774.1| PREDICTED: uncharacterized protein LOC100821385 [Brachypodium
distachyon]
Length = 622
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 132/320 (41%), Gaps = 27/320 (8%)
Query: 127 PGTPFTVDAFRYGSIKGCSAYFLTHFHYDHY--GGLGKRWSHGPIYCSPLTARL-VRMCL 183
PG PF VD + S + FLTH H DH G G +Y + LT L +R
Sbjct: 7 PGLPFAVDTWGPSSRRR-RHRFLTHAHRDHLVGAGTDPGGGGGTVYSTRLTMSLALRHFP 65
Query: 184 LVNPSYIHPLELNTEHVID----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ +E+ ++D VT +ANHCPGA + F + G LHTGD R +
Sbjct: 66 RLEQGEFVEIEVGKTLLVDDPAGAFSVTAYDANHCPGAVMFLFEGEFGS-ILHTGDCRLT 124
Query: 240 -RLMQSYP---LLVNHRVNV-----LYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
+Q+ P + R N+ ++LD T+ K PSKE + V+ C+ K
Sbjct: 125 PDCVQNLPHKYIAKKGRENICRLDFVFLDCTFSKCFLKLPSKESAIQQVI----ACIWKH 180
Query: 291 PKT-LVVVGAYSIGKESVFLAISKALGVKIYANAS-RRRVLQSFDWPELSGNLCTQGNDT 348
P V + +G E++ + +S+ G KIY + L++ L + T
Sbjct: 181 PHAPFVYLACDLLGHEAILVEVSRTFGSKIYVDIRWNSDCLKALSLTAL--EIITDDPSC 238
Query: 349 LLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITI 408
++ L K N L RP+ Y+ NQ + + + I
Sbjct: 239 RFQIVGFHQLYDSASKKLEGARANLQPEPLFIRPSTQWYA-CARNQKPSLTEAEQDDFGI 297
Query: 409 YGVPYSEHSSFTELREFVQV 428
+ + +S HSS EL + +Q+
Sbjct: 298 WHICFSIHSSRDELEQALQL 317
>gi|326497347|dbj|BAK02258.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532736|dbj|BAJ89213.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 134/324 (41%), Gaps = 37/324 (11%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHY--GGLGKRWSHGPIYCSPLTARLV--RMCL 183
G PF VD + S + FLTH H DH G +Y + LT L
Sbjct: 8 GLPFAVDTWGPSS-RPRRHRFLTHAHRDHLVGAAGAGPGGGGAVYATRLTLSLALRHFPQ 66
Query: 184 LVNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
L ++ E T V D VT +ANHCPGA + F + G LHTGD R +
Sbjct: 67 LDQGEFVEVEEGRTIEVDDPAGAFSVTAYDANHCPGAVMFLFEGEFGS-ILHTGDCRLTP 125
Query: 241 -LMQSYPLLVNH--------RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
Q+ PL R++ ++LD T+ K PSKE + V+ C+ K P
Sbjct: 126 DCAQNLPLKYIAKKGKENVCRLDFVFLDCTFSKCFLKLPSKELAIQQVI----ACIWKHP 181
Query: 292 KT-LVVVGAYSIGKESVFLAISKALGVKIYANASRR----RVLQSFDWPELSGN--LCTQ 344
V + +G E + + +S+ G KIY + R + L S PE+ + C
Sbjct: 182 DAPFVYLACDLLGHEEILVEVSRTFGSKIYVDVRRNSDCFKAL-SLTAPEIITDDPSCRF 240
Query: 345 GNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRG 404
H+ +S K E + L+P L RP+ Y+ NQ + +
Sbjct: 241 QIVGFHHLYDNASKKLEGARASLQPEP------LFIRPSTQWYA-CGRNQKPSLTEAQQD 293
Query: 405 NITIYGVPYSEHSSFTELREFVQV 428
+ I+ V +S HSS EL + +Q+
Sbjct: 294 DFGIWHVCFSIHSSRDELEQAMQL 317
>gi|170579436|ref|XP_001894830.1| hypothetical protein Bm1_16865 [Brugia malayi]
gi|158598434|gb|EDP36325.1| hypothetical protein Bm1_16865 [Brugia malayi]
Length = 524
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL-----VNPSYIHPLELNTEHVID 202
FL+ H L W I CSP+TA+L+ + ++ +I PL+LN H ++
Sbjct: 31 FLSSAHSRQCRKLVSEWQCNRICCSPITAKLLSVISTGRKYKISDKWIRPLDLNVWHKME 90
Query: 203 GVKVTLLEANHCPGAALIHFRLQDGQC---YLHTGDFRAS----RLMQSYPLLVNHRVNV 255
+V L++ANH PG+ ++ + L+TG FRA R + L + ++
Sbjct: 91 RFRVMLVDANHAPGSVMLIIEREHHSTLRRILYTGFFRADAKFYRNVIGLSALQEKKFDL 150
Query: 256 LYLDTTYCN-PKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKA 314
+ +D++Y + +FPS++ L + LK + V + IG ES+ + IS+
Sbjct: 151 ICIDSSYVDFTDGEFPSRQSSAKKAAELLRK-LKYNGVSGVAIPVPLIGCESLLVNISRQ 209
Query: 315 LGVKIYANASRRRV 328
L KI+ + R +
Sbjct: 210 LECKIWLHPERFEI 223
>gi|91090768|ref|XP_969213.1| PREDICTED: similar to artemis protein [Tribolium castaneum]
gi|270013270|gb|EFA09718.1| hypothetical protein TcasGA2_TC011851 [Tribolium castaneum]
Length = 383
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 137/322 (42%), Gaps = 39/322 (12%)
Query: 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPI-------YCSPLTAR 177
+IPG +VD F G+ A+FL+H H DH GL H + Y S ++A
Sbjct: 10 EIPG--ISVDRFD-GANLDSEAFFLSHCHTDHMKGLEAPEFHEKLAQNRRFLYLSHVSAE 66
Query: 178 LVRMCLLVNPSYIHPLELNTEHVI----DGVKVTLLEANHCPGAALIHFRLQDGQCYLHT 233
+VR + L++ + + + VT + A HCPG+ + F Q L+T
Sbjct: 67 IVRRMFPKIGDNLIELDMRSPTSVFLQSGAISVTPIPAGHCPGSIMFLFEAQVN--VLYT 124
Query: 234 GDFRAS-----RLMQSYPLL-VNHRVNVLYLDTTYCNPKY-KFPSKEDVLNYVVRLTKNC 286
GD+R + + Y L R+ +YLDTT+ Y KFP + + L + + +
Sbjct: 125 GDYRINPRDIPKFTAFYDSLNAKKRIEAVYLDTTFFLKSYAKFPPRAESLEEICSIISDW 184
Query: 287 LKKQPKTLVVVGAYS-IGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQG 345
+ + K ++ + + G E +F+ I K + + I+ N PE+ T+
Sbjct: 185 ISRSDKHVIGLDTSAKYGYEYLFIEIYKQIKMPIHVNDEIYEFYSRV--PEMD-RAVTRS 241
Query: 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGN 405
DT +H + T+ Y + V AFR W SE++ N +S
Sbjct: 242 KDTRIH--SACGTTYRTVCPNTVHYNVKVVKVSAFR---WK-SESLQNG------ISEKT 289
Query: 406 ITIYGVPYSEHSSFTELREFVQ 427
+ V YS H+SF E E V+
Sbjct: 290 HNTHFVCYSTHASFEEGVELVK 311
>gi|255940940|ref|XP_002561239.1| Pc16g09210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585862|emb|CAP93591.1| Pc16g09210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 677
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 21/150 (14%)
Query: 190 IHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS 244
+ P+ LNT I+ +KVTL +ANHC GA + DG+ ++TGD RA S
Sbjct: 45 LRPIPLNTPTEIELTPRRRIKVTLFDANHCTGAVMFLIE-GDGKAIIYTGDIRAETWWVS 103
Query: 245 ----YPLLV-----NHRVNVLYLDTTYC---NPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
+P+L+ R++ LYLD+T+ NP +FPSK + L+ L +
Sbjct: 104 SLVRHPVLIPYTLGQKRLDKLYLDSTFASKTNPFREFPSKAEGLS---ELLQKIQAYPDD 160
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYAN 322
T+ A++ G E V++A+S AL KI+ +
Sbjct: 161 TVFYFRAWTFGYEDVWIALSAALNTKIHVD 190
>gi|425772924|gb|EKV11304.1| DNA repair protein, putative [Penicillium digitatum PHI26]
gi|425782106|gb|EKV20035.1| DNA repair protein, putative [Penicillium digitatum Pd1]
Length = 666
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 21/150 (14%)
Query: 190 IHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS 244
+ P+ LNT I+ +KVTL +ANHC GA + DG+ ++TGD RA S
Sbjct: 35 LRPIPLNTPTKIELTPRRCIKVTLFDANHCTGAVMFLIE-GDGKAIIYTGDIRAETWWVS 93
Query: 245 ----YPLLVNH-----RVNVLYLDTTYC---NPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
+P+L+ + R++ LYLD+T+ NP +FPSK + L+ L +
Sbjct: 94 SLVRHPVLIPYTLGPKRLDKLYLDSTFASKTNPFREFPSKAEGLS---ELLQKVQAYPDD 150
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYAN 322
T+ + A++ G E V++A+S AL KI+ +
Sbjct: 151 TVFYLRAWTFGYEDVWIALSAALNTKIHVD 180
>gi|315041635|ref|XP_003170194.1| hypothetical protein MGYG_07438 [Arthroderma gypseum CBS 118893]
gi|311345228|gb|EFR04431.1| hypothetical protein MGYG_07438 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 59/236 (25%)
Query: 133 VDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLT--------------- 175
VD+FR A FL+H H DH GL P +YCS T
Sbjct: 10 VDSFRKNPEWPAPLACFLSHVHSDHLTGLESL--RAPFVYCSTATREILLRIEKYPHRMN 67
Query: 176 ----------------ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAAL 219
A+L+R L P+ I + NT ++VTL +ANHCPG+ +
Sbjct: 68 FAKGILESRKQHYKHLAKLLRPIPLQVPTEIELMPGNT------IRVTLFDANHCPGSVM 121
Query: 220 IHFRLQDG-QCYLHTGDFRAS----RLMQSYPLLVNH-----RVNVLYLDTTYCNPK--- 266
F ++ G + +TGD RA + + P+L+ + R++ +YLDTT+
Sbjct: 122 --FLIEGGDKAIFYTGDIRAEAWWVQSLVRNPVLIPYTMGDCRLDTIYLDTTFATKSDIH 179
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
FPSK + + ++ K K T+ + +++ G E V+LA+S AL KI+ +
Sbjct: 180 QVFPSKAEGIQELLGKVKGYPK---DTIFYLRSWTFGYEDVWLALSAALNTKIHVD 232
>gi|307191536|gb|EFN75039.1| Artemis protein [Camponotus floridanus]
Length = 318
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 31/224 (13%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW------SHGPIYCSPLTAR 177
++IPG +VD F G SAYFL+H H DH G+ ++ + +YCS ++
Sbjct: 9 EEIPG--ISVDRFD-GENLNSSAYFLSHCHTDHMQGINYQFFKHLQQYNKYLYCSRISKL 65
Query: 178 LVRMCLLVNPSYIHPLELNTEHVID---------GVKVTLLEANHCPGAALIHFRLQDGQ 228
++ S + L LN + I+ + VT + A HCPG+ + F + +
Sbjct: 66 FLKAKDYYIESCVKDLSLNIKVCIEYKNKDNDKNILFVTCISAGHCPGSVM--FLFETDK 123
Query: 229 CYLHTGDFRAS-------RLMQSYPLLVNH--RVNVLYLDTTYCNPKYK-FPSKEDVLNY 278
L+TGDFR + + SY H ++ +YLDTT+ + ++ FP++++ +
Sbjct: 124 LVLYTGDFRINPEDYKKIASLHSYENYNVHPKKLAKMYLDTTFLDSNFRSFPTRKESIKK 183
Query: 279 VVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYA 321
+ + LKK P+ +VV+ ++ G E +++ +S+ I+
Sbjct: 184 ICIEIEKWLKKSPRNVVVLECSALYGSEFLYVELSRMFNTCIHV 227
>gi|190345415|gb|EDK37296.2| hypothetical protein PGUG_01394 [Meyerozyma guilliermondii ATCC
6260]
Length = 651
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 144 CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIH------------ 191
S + L+H H DH GL R + +YCS T +L L N SY H
Sbjct: 28 ASIFLLSHHHADHTIGLRNRTFNRRVYCSKGTKKL----LESNESYNHIQHLIRALDYNR 83
Query: 192 --PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS----- 244
L + + I V VTL+ + HCPG+ + QD + ++TGD RA
Sbjct: 84 QYTLNVEQDKEITSVVVTLIPSYHCPGSCMFLIE-QDEKAVIYTGDIRAEDWWIKGLPYN 142
Query: 245 ---YPLLVNHRVNVLYLDTTYC---NPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
YP + ++ +Y+DTT+ P K+ + D L + + K P+
Sbjct: 143 QFLYPYTSSKQLENIYIDTTFAYRGEPYAKYATNSDALKILAGILALYPKDDPEIQFYFN 202
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
G + ++ ++ G++I+A A+ ++L + E
Sbjct: 203 DSVSGLDECWIKLAYEFGLEIHAEATNSKILNVVEVTE 240
>gi|154295597|ref|XP_001548233.1| hypothetical protein BC1G_13069 [Botryotinia fuckeliana B05.10]
Length = 352
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 47/239 (19%)
Query: 133 VDAFRYGSIKGCSA---YFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLV--------R 180
VD FR I G +A FL+H H DH GL + P +YCS T ++ R
Sbjct: 16 VDHFR--QIIGRTAPLACFLSHVHSDHLEGLDNDRVNLPFVYCSAATREILLRLEKRRDR 73
Query: 181 MCLLVN------------PSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFR 223
+ L S + P+ L T +I+ V+VTL ++NHC GA + F
Sbjct: 74 LNLAQGILEKEKRTYKHLKSVLKPIPLETPTLIELAPKNEVRVTLFDSNHCTGAVMFLFE 133
Query: 224 LQDGQCYLHTGDFRA-----SRLMQSYPLLVNH-----RVNVLYLDTTYCNPKYKFPSKE 273
++ L+TGD R+ + L +S P L+ + ++ +YLDT+ P FP+K
Sbjct: 134 -KENIAVLYTGDVRSEIWFVNNLTRS-PFLIEYTSGMKTLDCIYLDTSNTGP-LAFPTKA 190
Query: 274 DVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
D L ++ + K P T A++ G E V+ A+S+ L +I+ + + ++ QS
Sbjct: 191 DGLKEMIDKVR---KYPPNTKFHFSAWTFGYEEVWAALSRTLDSQIHVDKYKYKLYQSL 246
>gi|302403927|ref|XP_002999802.1| artemis protein [Verticillium albo-atrum VaMs.102]
gi|261361558|gb|EEY23986.1| artemis protein [Verticillium albo-atrum VaMs.102]
Length = 657
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA----RLVRMCLLVN--------------- 186
A FL+H H DH GL S +YCS T RL R +N
Sbjct: 30 ACFLSHVHSDHLAGLESLRSPF-VYCSAATREILLRLERYPCRINFAKGILEARVQTFKG 88
Query: 187 -PSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS- 239
+ P+ L+T I+ ++VTL++ANHCPGA + DG+ L+TGD R+
Sbjct: 89 LKGLLKPIPLDTPTEIELAPGLCIQVTLIDANHCPGAVMFLIE-GDGRAVLYTGDIRSEP 147
Query: 240 ---RLMQSYPLLVNH-----RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
+ P L+ + ++ +YLDT++ + F +K + + L + P
Sbjct: 148 WHVNSVARNPALIEYTHGSKTLDKIYLDTSFID-DVHFQTKAE---GIAELLGKVSRYPP 203
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
T+ A++ G E V++A+SKAL +++ + + ++ S
Sbjct: 204 DTIFHFQAWTYGYEEVWIALSKALKSRVHVDDYKMKIFSSL 244
>gi|238577395|ref|XP_002388375.1| hypothetical protein MPER_12610 [Moniliophthora perniciosa FA553]
gi|215449605|gb|EEB89305.1| hypothetical protein MPER_12610 [Moniliophthora perniciosa FA553]
Length = 188
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 313 KALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGN 372
KA +IY ++ + +L+ + EL G L T D +H++P+ + + LK+YL +
Sbjct: 1 KATNSRIYCDSRKAAILRCENDLELEGMLTTNPKDASVHLVPLGVIVSDKLKEYLDRWKG 60
Query: 373 QYAAVLAFRPTGWTYSETVG-NQLDLIRPL-------------------SRGNITIYGVP 412
+ V+ FRPTGWTY+ G + L I + S + +Y VP
Sbjct: 61 HFTHVVGFRPTGWTYTAPAGTDTLPSISSVIARAQKINYTYVDLQPSRQSTKEVEVYPVP 120
Query: 413 YSEHSSFTELREFV 426
YSEHSSF EL F
Sbjct: 121 YSEHSSFFELTCFA 134
>gi|440302601|gb|ELP94908.1| DNA repair metallo-beta-lactamase, partial [Entamoeba invadens IP1]
Length = 217
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 37/186 (19%)
Query: 253 VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAIS 312
++ L+LDTTYC+P+Y FP + V N V++ K K + KTL VVG Y IGKE I+
Sbjct: 7 IDTLFLDTTYCDPQYTFPDRVSVSNEAVKIIK---KTKEKTLYVVGTYLIGKEIFVEEIA 63
Query: 313 KALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFET---------L 363
+ G KI N + +Q D L+ L + L+ L
Sbjct: 64 RQTGKKICVNEQKMVTIQ------------LSQRDLSLYTLEKTDLEMRNSGIEVSLSGL 111
Query: 364 KDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITI--YGVPYSEHSSFTE 421
L +++ ++ F PTGW + +S+G+ + Y +PYSEHS+F E
Sbjct: 112 NVELDQIKDKFQRIVLFTPTGWAK-----------KLVSKGSFDVKEYQLPYSEHSNFNE 160
Query: 422 LREFVQ 427
L + V+
Sbjct: 161 LVDCVK 166
>gi|406604220|emb|CCH44306.1| Endoribonuclease ysh1 [Wickerhamomyces ciferrii]
Length = 704
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSY------IHPLELNTEHV 200
Y LTH H DH GL +S P+YCS +T L+++ NP Y + PL+ N H
Sbjct: 16 YLLTHAHADHLKGLDSSFSGHPVYCSEITKELLKL----NPKYSRSWPSLRPLKENQRHT 71
Query: 201 I---DGVKV--TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
+ DGV + TL+ A HCPGA + + + L TGD RA R
Sbjct: 72 VPLKDGVSINLTLIPARHCPGAVMFLVE-SNEKSILITGDIRAER 115
>gi|47218348|emb|CAG04180.1| unnamed protein product [Tetraodon nigroviridis]
Length = 513
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 40/213 (18%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPL----TARL-----VRMCLLVNP------SYI 190
AYFL+H H DH GL GP+ L T RL R LL +P SY
Sbjct: 28 AYFLSHCHKDHMKGL-----KGPVLKRKLQLSRTVRLYCSYVTRELLLSSPKYAFWESYT 82
Query: 191 HPLELNTEHVIDGVK----------VTLLEANHCPGAAL--IHFRLQDGQ-CYLHTGDFR 237
PLEL++ I V VTLL A HCPG+ + F + Q L+TGDFR
Sbjct: 83 VPLELDSPTQISLVDETTGEKEDLVVTLLSAGHCPGSVMQVTAFLFEGSQGTVLYTGDFR 142
Query: 238 -----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQP 291
SR+ + + +YLD+T+ +PK ++ P+++ L ++ L + + P
Sbjct: 143 FSTGDISRMDHLHSGSRVKDIQSIYLDSTFYDPKFFRIPTRDACLKGIMELVGKWISQSP 202
Query: 292 KTLVVVGAYSI-GKESVFLAISKALGVKIYANA 323
+ + + G E +F + + +I+ N+
Sbjct: 203 HHVAWLNCKAAYGYEYLFTHLGEEFNTQIHVNS 235
>gi|390603656|gb|EIN13048.1| hypothetical protein PUNSTDRAFT_141568 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 899
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 140/390 (35%), Gaps = 105/390 (26%)
Query: 127 PGTPFT---------VDAFRY-GSIKGCSA-YFLTHFHYDHYGGLGKRWSHGPIYCSP-- 173
PGTP+ VDAF +I+ A + LTH H DH GL + I CSP
Sbjct: 3 PGTPYNSFVLPYSIRVDAFASNATIETVPALHLLTHTHSDHITGLSAKSFAATIICSPDA 62
Query: 174 -------------------LTARLVRMC--LLVNP--------------SYIHPLELNTE 198
+ A +R L V P + + L+T
Sbjct: 63 KEMLLRYEVYAERNLYETEMRAEKIRAFAHLKVEPRKHLDGTTFHHGSRDLLRAIPLHTP 122
Query: 199 HVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----RLMQSYPLL- 248
I+ V +TL++ANHCPGA + G LHTGDFRA ++ P L
Sbjct: 123 TAIELYNSESVVITLIDANHCPGAVMFLVEGSKG-AVLHTGDFRAEPYFLEGLKRNPFLL 181
Query: 249 ----------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
V ++ +YLDT P K+ +V L + P+
Sbjct: 182 RYIVPQSITTPDGHGGVRKTLDAVYLDTACLFSNLNVPPKDVATFGLVELVQLF---PPE 238
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
TL + ++ G E + I+ A KI+ + + V P + + T H
Sbjct: 239 TLFFLNTWTWGYEDILKGIAHAFDSKIHVDRYKHSVFSHISDPFMRAIITRDAKSTRFHA 298
Query: 353 L-------PMSSLKFETLKD------YLKPYGNQYAAVLAFRPTGW-TYSETVGNQLDLI 398
P+ + + ++ Y+ P + W TY +TV QL
Sbjct: 299 CERFAQCSPIDDMFAQEARENNGRIVYINP--------VTMGSESWNTYRQTVKKQLR-- 348
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFVQV 428
+ + I VP S HS EL++FV +
Sbjct: 349 ---NGKVVNILLVPLSRHSPLPELKQFVSM 375
>gi|345565478|gb|EGX48427.1| hypothetical protein AOL_s00080g56 [Arthrobotrys oligospora ATCC
24927]
Length = 774
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 52/246 (21%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCS---AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLV 179
K++ G F D FR + G A FL+H H DH GL + P IYCS T +L+
Sbjct: 10 KELSGIQF--DYFR--KVDGAEPSLANFLSHIHSDHLTGLAGKSYRAPFIYCSAATKQLL 65
Query: 180 --------------RMCLLVNPSYIH-----------PLELNTE-HVIDG--VKVTLLEA 211
++ SY+H PLE T+ + G ++VTL +A
Sbjct: 66 LKLERRLHRFNYAKKLVESHEYSYLHYANRDRILRELPLETPTDIELCPGYTIRVTLFDA 125
Query: 212 NHCPGAALIHFRLQDGQCYLHTGDFRAS----RLMQSYPLLVNH-----RVNVLYLDTTY 262
NHCPG+ + + G+ L+TGD RA ++ P+L+ + ++ LYLDTT+
Sbjct: 126 NHCPGSTMFLVEGR-GKAILYTGDIRAEPWWLEKLKRNPILLPYFRGIKTLDCLYLDTTH 184
Query: 263 CN---PKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKI 319
+ F SK D + L K P+T+ + +++G E ++A++ +I
Sbjct: 185 ASFEASHLTFSSKAD---GIADLLTQISKYPPETVFHLNTWTLGYEDAWVALASYFNTQI 241
Query: 320 YANASR 325
+ + R
Sbjct: 242 HLDDYR 247
>gi|212540178|ref|XP_002150244.1| DNA repair protein, putative [Talaromyces marneffei ATCC 18224]
gi|210067543|gb|EEA21635.1| DNA repair protein, putative [Talaromyces marneffei ATCC 18224]
Length = 641
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 50/216 (23%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--------RMCLLVN------------P 187
FL+H H DH GL + + IYCS +T L+ RM
Sbjct: 26 FLSHVHSDHLQGL-ESFRSPFIYCSAVTRELLLRLEKFPHRMNFSKGILEARKQHYGHLA 84
Query: 188 SYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL- 241
+ P+ LNT I+ V+VTLL+ANHC GA ++ Q G+ L+TGD RA
Sbjct: 85 KILRPIPLNTPTEIELTPLQRVRVTLLDANHCAGAVMLLIEGQ-GKAILYTGDIRAESWW 143
Query: 242 ---MQSYPLLVNHRVNV-----LYLDTTYC---NPKYKFPSK----EDVLNYVVRLTKNC 286
+ +P LV + + +YLDTT+ N FPSK +++L V R K+
Sbjct: 144 VNSLIRHPALVPYACGLKTLDNIYLDTTFAVKSNIYRHFPSKAEGIKELLEKVGRYPKD- 202
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
T++ + A++ G E V+ A+S L K++ +
Sbjct: 203 ------TVLYLRAWTFGYEEVWQALSAFLESKVHVD 232
>gi|325093010|gb|EGC46320.1| DNA repair protein [Ajellomyces capsulatus H88]
Length = 705
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 38/222 (17%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTA----RLVRMCLLVNPS----------YI 190
A FL+H H DH GL P IYCS T RL + +N S Y
Sbjct: 34 ACFLSHVHSDHLQGLESL--RAPFIYCSAATREILLRLEKYPHRINFSKGILESRKQHYK 91
Query: 191 H--------PLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
H PL++ TE + + ++VTL +ANHCPGA + +G+ L+TGD RA
Sbjct: 92 HLSKLLRPIPLQVPTEIELSPRNNIRVTLFDANHCPGAVMFLIE-GNGKAILYTGDIRAE 150
Query: 240 RL----MQSYPLLVNHR-----VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
+ P+L+ + ++ +YLDTT+ + + + L +
Sbjct: 151 SWWVDNLIRNPVLIPYTLGSKLLDKIYLDTTFATKSDVYQTFASKAEGIRELLEKVQTYP 210
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
TL + ++ G E V+LA+S AL +I+ + + V QS
Sbjct: 211 DNTLFYLRVWTFGYEDVWLALSAALNTRIHVDRYQMGVYQSL 252
>gi|146419523|ref|XP_001485723.1| hypothetical protein PGUG_01394 [Meyerozyma guilliermondii ATCC
6260]
Length = 651
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 144 CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIH------------ 191
S + L+H H DH GL R + +YCS T +L L N SY H
Sbjct: 28 ASIFLLSHHHADHTIGLRNRTFNRRVYCSKGTKKL----LESNESYNHIQHLIRALDYNR 83
Query: 192 --PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS----- 244
L + + I V VTL+ + HCPG+ + QD + ++TGD RA
Sbjct: 84 QYTLNVEQDKEITLVVVTLIPSYHCPGSCMFLIE-QDEKAVIYTGDIRAEDWWIKGLPYN 142
Query: 245 ---YPLLVNHRVNVLYLDTTYC---NPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
YP + ++ +Y+DTT+ P K+ + D L + + K P+
Sbjct: 143 QFLYPYTSSKQLENIYIDTTFAYRGEPYAKYATNSDALKILAGILALYPKDDPEIQFYFN 202
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPE 336
G + ++ ++ G++I+A A+ ++L + E
Sbjct: 203 DSVSGLDECWIKLAYEFGLEIHAEATNSKILNVVEVTE 240
>gi|116753406|ref|YP_842524.1| beta-lactamase domain-containing protein [Methanosaeta thermophila
PT]
gi|116664857|gb|ABK13884.1| beta-lactamase domain protein [Methanosaeta thermophila PT]
Length = 635
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 40/203 (19%)
Query: 146 AYFLTHFHYDHYG---GLGKRWSHGPIYCSPLTARLVRMCLL------------------ 184
A LTH H DH G L K GPIYC+P T L + L
Sbjct: 237 AVVLTHAHLDHSGLVPMLYKYGYEGPIYCTPPTRDLYVLLQLDYIEVAGREGKRLPYDSS 296
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLH-TGDFR-- 237
+ + H + LN V D K+T+ A H G+A+ HF + DG + TGDF+
Sbjct: 297 MIREALKHTITLNYGDVTDIAPDTKLTMHNAGHILGSAIAHFHIGDGLYNVAFTGDFKYE 356
Query: 238 ASRL----MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+RL + S+P R+ L ++ TY PS+++ N+++R+ + +K+ K
Sbjct: 357 KTRLFDPAVNSFP-----RLETLVIEATYGGANSIQPSRKEAENHLLRVVRETIKRGGK- 410
Query: 294 LVVVGAYSIGK-ESVFLAISKAL 315
VV+ A+++G+ + V + + +A+
Sbjct: 411 -VVIPAFAVGRSQEVMVVLEEAI 432
>gi|150865646|ref|XP_001384956.2| hypothetical protein PICST_17702 [Scheffersomyces stipitis CBS
6054]
gi|149386902|gb|ABN66927.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 411
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 31/236 (13%)
Query: 137 RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPS--YIHPLE 194
++GS C Y LTH H DH GL + +YCS +T L+ S Y+ P +
Sbjct: 21 KFGS--ECQIYLLTHHHADHTVGLANKSFCRRVYCSQMTKDLISQSQQFEDSLRYLVPKQ 78
Query: 195 LNTEHVI----DGVKVTLLEANHCPGAALIHFRLQDGQC-YLHTGDFRA-----SRLMQS 244
N V+ + V +TL+ + HCPG+ + F +++ + L TGD RA + L +S
Sbjct: 79 YNEPFVLTVSDEEVTITLIPSYHCPGSTM--FLIENRRASVLFTGDIRAETWWVNSLAKS 136
Query: 245 ---YPLLVNHRV-NVLYLDTTYC---NPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+P + +V + LY+DTT+ P + P + + ++ + KN P+
Sbjct: 137 PFLFPYTIGAKVLDQLYIDTTFSYRGEPYVEIPENNEGIKVIIEMLKNFPINDPEIQFCF 196
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVL 353
+ G E ++ I ++ + +A RR ++ ++ +C N + HVL
Sbjct: 197 MDSTSGFEEAWVQIISSIEGSLSLSADLRRRIEL-----IASEVC---NGPIFHVL 244
>gi|336466543|gb|EGO54708.1| hypothetical protein NEUTE1DRAFT_124903 [Neurospora tetrasperma
FGSC 2508]
Length = 578
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----RLMQSYPL 247
P+EL E + ++VTLL+ANHCPGA + F Q G+ L+TGD R+ + P
Sbjct: 76 PVELELEPG-NHIQVTLLDANHCPGAVMFLFEGQ-GKAALYTGDIRSEPWHVNAIARSPS 133
Query: 248 LVNHRVNVLYLDTTYCNPKY----KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIG 303
+V + + LDT Y + + +FP+K ++ L + P T+ A++ G
Sbjct: 134 MVQYAYGLKTLDTIYLDTSFIEDIEFPTKAQGIS---ELLDKISRYPPNTIFHFQAWTYG 190
Query: 304 KESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLP 354
E V++A+SKAL +++ + + + QS + SGN +G L H+ P
Sbjct: 191 YEDVWVALSKALESRVHVDEYKMGIYQSL-LAKDSGN--KRGFGVLHHLSP 238
>gi|171909556|ref|ZP_02925026.1| DNA ligase I, ATP-dependent (dnl1) [Verrucomicrobium spinosum DSM
4136]
Length = 921
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 19/183 (10%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--RMCLLVNPSYIHPLELNTEHVID-GV 204
F++H H DH+ H CSP+T ++ R + + + P E V + G
Sbjct: 36 FVSHAHSDHFA------RHEFTLCSPVTHAIIDKRYGAITAGASLAPA--YGEAVFERGH 87
Query: 205 KVTLLEANHCPGAALIHF-RLQDGQCYLHTGDF--RASRLMQSYPLLVNHRVNVLYLDTT 261
++ LL A H G+A++H R +DG L+TGD+ R R + L H L ++TT
Sbjct: 88 ELRLLPAGHILGSAMLHVTRQEDGATLLYTGDYKLRHGRTAEPAELRPAH---TLIMETT 144
Query: 262 YCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYA 321
+ P Y FP +E VL+ +++ + L+ Q + V+ YS+GK L+ G+ +
Sbjct: 145 FGLPMYVFPPQEQVLSDIIQWARETLEDQ--GIPVLLGYSLGKAQEVLSAFHGAGLPVML 202
Query: 322 NAS 324
+ S
Sbjct: 203 HPS 205
>gi|356518765|ref|XP_003528048.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
Length = 553
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 24/214 (11%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR-LVRMCLLVN 186
G PF+VD + S K FLTH H DH + S+ PIY + LT L++ ++
Sbjct: 8 GLPFSVDTWTPSSSK--RHCFLTHAHKDHSSSITSHSSY-PIYSTNLTKTILLQQYPQLD 64
Query: 187 PSYIHPLELNTEHVIDG-----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR- 240
S +EL VI V+ +ANHCPGA + F + G LHTGD R +
Sbjct: 65 ASLFLNIELGQSLVIHDPAAAPFTVSAFDANHCPGAVMFLFEGKFGN-ILHTGDCRLTPE 123
Query: 241 -LMQSYPLLVNHR-------VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
L+ V + ++ ++LD T+ N PSK + V+ NC+ K P
Sbjct: 124 CLLNLPDKYVGRKGKEPRCPLDCVFLDCTFGNFSQGMPSKHSAIQQVI----NCIWKHPD 179
Query: 293 TLVV-VGAYSIGKESVFLAISKALGVKIYANASR 325
V + +G+E + + +S+ G KIY + ++
Sbjct: 180 AQTVYLTCNMLGQEEILVNVSETFGAKIYVDKAK 213
>gi|125601931|gb|EAZ41256.1| hypothetical protein OsJ_25764 [Oryza sativa Japonica Group]
Length = 619
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 206 VTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNP 265
VT +ANHCPGA + F LHTGD RL + L + ++LD T+
Sbjct: 46 VTAFDANHCPGAVMFLFEGASFGRVLHTGD---CRLTPDFRFLA---ADYVFLDCTFAAC 99
Query: 266 KYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV-VGAYSIGKESVFLAISKALGVKIYANAS 324
FPSK+D + V+ NC+ K P VV + + +G+E + + +SK G KIY +
Sbjct: 100 SLHFPSKDDSIRQVI----NCIWKHPNAPVVYLVSDMLGQEEILMEVSKVFGSKIYVDRD 155
Query: 325 R 325
+
Sbjct: 156 K 156
>gi|303322829|ref|XP_003071406.1| hypothetical protein CPC735_069430 [Coccidioides posadasii C735
delta SOWgp]
gi|240111108|gb|EER29261.1| hypothetical protein CPC735_069430 [Coccidioides posadasii C735
delta SOWgp]
Length = 769
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 52/229 (22%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIH-------------- 191
A FL+H H DH GL S +YCS T R LL Y H
Sbjct: 24 ACFLSHVHSDHLQGLESLRSPF-VYCSAAT----RKILLRIEKYPHRMNFAKGILETRKQ 78
Query: 192 ------------PLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
PL + TE + ++VTL ANHCPGA + +G+ L+TGD
Sbjct: 79 EYKHLAKLLRPIPLHVPTEIELTPGSTIRVTLFNANHCPGAVMFLIE-GNGKAILYTGDV 137
Query: 237 RAS----RLMQSYPLLVNH-----RVNVLYLDTTYC---NPKYKFPSKEDVLNYVVRLTK 284
RA + P+L+ + R++ +YLDTT+ + FPSK + + ++
Sbjct: 138 RAEPWWVESLIRNPILIPYTLGDCRLDRIYLDTTFAIKSDIYSAFPSKAEGIKELL---- 193
Query: 285 NCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
+ +K P+ T+ ++ G E V++A+S AL KI+ + + ++ QS
Sbjct: 194 HKVKAYPEDTIFYFRNWTFGYEDVWIALSAALNTKIHVDQYQLKLYQSL 242
>gi|290993759|ref|XP_002679500.1| predicted protein [Naegleria gruberi]
gi|284093117|gb|EFC46756.1| predicted protein [Naegleria gruberi]
Length = 506
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 139/321 (43%), Gaps = 53/321 (16%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGP-------IYCSPLTAR-LVRMCLLVNPSYIHPLEL--N 196
YFL+H H DH+ GL R+ I C P+T L+ + ++ I ++L
Sbjct: 16 YFLSHCHSDHFKGLDDRFFQNASASDETCIVCHPITRNLLLALYPKLDKDRILAIDLLQP 75
Query: 197 TEHVIDGVK--------VTLLEANHCPGAALIHFRL------QDGQCYLHTGDFR--ASR 240
T + G TLL +NHCPG+ + F + + + L+ GDFR S
Sbjct: 76 TLLTVRGASSKEPKHFMCTLLSSNHCPGSCMFLFEIAKPGSPNEVESILYCGDFRDPPSD 135
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPK--YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
+Q L + +++ +Y+D T+C+P P + D + +++L + KQ + +
Sbjct: 136 TIQ---YLKSKKISKVYIDDTFCDPSNFLNLPKRSDSIKELIKLIEKERAKQRAVYIALD 192
Query: 299 AYSIGKESVFLAISKALGVKIYA-----NASRRRVLQSFDWPELSGNLCTQGND-TLLHV 352
+G E V + K++ N RR+ + L N+ T+ + T + V
Sbjct: 193 L--LGTERVLFELVSHFKTKLFCDYENLNPKRRKEIDC--MKSLKENIFTRDKEKTFIRV 248
Query: 353 LPMSSLKFETLKDYLKPYGN-QYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNIT---- 407
+ +++K +L + LK + ++ + +T G + RG+ T
Sbjct: 249 VSKTTIK--SLAELLKKEDDCPLLICISTMFLKYLNKDTRG----MSSSFDRGSSTYFQD 302
Query: 408 -IYGVPYSEHSSFTELREFVQ 427
I+ + YS HSS E+ +F++
Sbjct: 303 GIFKILYSFHSSHKEILKFLE 323
>gi|119496867|ref|XP_001265207.1| hypothetical protein NFIA_020180 [Neosartorya fischeri NRRL 181]
gi|119413369|gb|EAW23310.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 690
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 81/150 (54%), Gaps = 21/150 (14%)
Query: 190 IHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL--- 241
+ P+ L+T I+ ++VTLL+ANHC GA + DG+ L+TGD RA R
Sbjct: 22 LRPIPLDTPTEIELTPLLSIRVTLLDANHCAGAVMFLIE-GDGKAVLYTGDIRAERWWVD 80
Query: 242 -MQSYPLLV-----NHRVNVLYLDTTYCNPKY---KFPSKEDVLNYVVRLTKNCLKKQPK 292
+ +P+L+ + +++ +YLDTT+ + FPSK + L +++ + K +
Sbjct: 81 SLVRHPVLIPYTLGSKKLDRIYLDTTFARINHVCRSFPSKAEGLRELLQKVEAYPK---E 137
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYAN 322
T+ A++ G E V++A+S L K++ +
Sbjct: 138 TVFYFRAWTFGYEDVWIALSALLNTKVHVD 167
>gi|148675642|gb|EDL07589.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_d [Mus musculus]
Length = 415
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 26/186 (13%)
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
+++ L++ +++ LYLD T CNP PS+++ +V+L +++ P+ + +G Y
Sbjct: 1 MLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQL----IRQFPQHNIKIGLY 56
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF 360
S+GKES+ ++ + + R ++Q L+ + +H + + +
Sbjct: 57 SLGKESLLEQLALEFRTWVVLSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHTEICH 113
Query: 361 ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFT 420
+ + NQ +A PT R + + +IY VPYS+HSS++
Sbjct: 114 SAMLQW-----NQSHPTIAIFPTS--------------RKVRSPHPSIYTVPYSDHSSYS 154
Query: 421 ELREFV 426
ELR FV
Sbjct: 155 ELRAFV 160
>gi|70778907|ref|NP_001020483.1| 5' exonuclease Apollo isoform b [Mus musculus]
gi|44890376|gb|AAH67017.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) [Mus
musculus]
Length = 415
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 26/186 (13%)
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
+++ L++ +++ LYLD T CNP PS+++ +V+L +++ P+ + +G Y
Sbjct: 1 MLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQL----IRQFPQHNIKIGLY 56
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF 360
S+GKES+ ++ + + R ++Q L+ + +H + + +
Sbjct: 57 SLGKESLLEQLALEFRTWVVLSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHTEICH 113
Query: 361 ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFT 420
+ + NQ +A PT R + + +IY VPYS+HSS++
Sbjct: 114 SAMLQW-----NQSHPTIAIFPTS--------------RKVRSPHPSIYTVPYSDHSSYS 154
Query: 421 ELREFV 426
ELR FV
Sbjct: 155 ELRAFV 160
>gi|225563060|gb|EEH11339.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 748
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 133 VDAFRYGSIKGCS-AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCLLVNPSYI 190
VD FR + A FL+H H DH GL P IYCS T R LL Y
Sbjct: 10 VDYFRKNPNRPAPLACFLSHVHSDHLQGLESL--RAPFIYCSAAT----REILLRLEKYP 63
Query: 191 HP-------LELNTEHVI----------------DGVKVTLLEANHCPGAALIHFRLQ-D 226
H LE +H + ++VTL +ANHCPGA + F ++ +
Sbjct: 64 HRINFSKGILESRKQHYKHLSKLLVPTEIELSPRNNIRVTLFDANHCPGAVM--FLIEGN 121
Query: 227 GQCYLHTGDFRASRL----MQSYPLLVNHR-----VNVLYLDTTYCNPKYKFPSKEDVLN 277
G+ L+TGD RA + P+L+ + ++ +YLDTT+ + +
Sbjct: 122 GKAILYTGDIRAESWWVDNLIRNPVLIPYTLGSKLLDKIYLDTTFATKSDAYQTFASKAE 181
Query: 278 YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
+ L + TL + ++ G E V+LA+S AL +I+ + + V QS
Sbjct: 182 GIRELLEKVQTYPDNTLFYLRVWTFGYEDVWLALSAALNTRIHVDRYQMGVYQSL 236
>gi|392566098|gb|EIW59274.1| hypothetical protein TRAVEDRAFT_36726 [Trametes versicolor
FP-101664 SS1]
Length = 983
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 145/398 (36%), Gaps = 104/398 (26%)
Query: 120 CPFYKKIPGTPFTVDAFRYGS--------IKGCSAYFLTHFHYDHYGGLGKRWSHGPIYC 171
P+ IP P VD F S Y LTH H DH GL R + C
Sbjct: 5 TPYNAFIPPYPIRVDDFSTPSSSSTNESQTPAVGLYLLTHTHTDHLNGLAARSFGQTVVC 64
Query: 172 S---------------------PLTARLVR--MCLLVNPSYIHPLELNTEHVID------ 202
S L A+ VR L ++P + LN D
Sbjct: 65 SHDAKEMLLRHEVYAERALRDMDLRAQNVRSYAHLKIDPQRMEDGSLNRAGSRDLLRATP 124
Query: 203 -------------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA----------S 239
V +TLL+ANHC GA + G LHTGD RA +
Sbjct: 125 LHAPEEFRLNDGQAVTITLLDANHCLGAVMFLVEGDKG-AVLHTGDLRAEPWFLNSLRHN 183
Query: 240 RLMQSY------PLLVNHR----------VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
+Q Y L NHR + +YLDT Y P+K D + L
Sbjct: 184 PYIQRYLDTSSASPLSNHRNSSRSTVLPKLEAIYLDTACLLNTYDVPNKADAAGGLTEL- 242
Query: 284 KNCLKKQPKTL-VVVGAYSIGKESVFLAISKALGVKIYANASRRRVL-QSFDWPELSGNL 341
+ P+T + A+++G E ++ A+++A G +I+ + + + + P L+ +
Sbjct: 243 ---MALYPETTRFFINAWTLGYEDIYKAVARAFGAQIHVDRYKHGLYSHTTGDPFLTSII 299
Query: 342 CTQGNDTLLHVLPMSSLKFETL-------KDYLKPYGNQ--YAAVLAFRPTGW-TYSETV 391
G+ T H + +F+ ++ P G+ Y + GW Y +
Sbjct: 300 TKDGSSTRFH----ACERFDRCEHVRVNGRESHTPSGHHVVYVNPVNMSTAGWDQYHKQT 355
Query: 392 GNQLDLIRPLSRG-NITIYGVPYSEHSSFTELREFVQV 428
+Q L+RG + + VP + HS ELR FV +
Sbjct: 356 RSQ------LARGERVNVLLVPIARHSPLPELRAFVSL 387
>gi|300771229|ref|ZP_07081105.1| mRNA 3-end processing factor [Sphingobacterium spiritivorum ATCC
33861]
gi|300761899|gb|EFK58719.1| mRNA 3-end processing factor [Sphingobacterium spiritivorum ATCC
33861]
Length = 333
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 16/188 (8%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+TH H DH RW G +C P + ++R+ L V + + +E ++GVK++
Sbjct: 30 LITHAHSDH-----ARWGMGHYWCHPDSIPILRLRLGVENN-VTGMEYGQVMSVNGVKIS 83
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASR--LMQSYPLLVNHRVNVLYLDTTYCNP 265
L A H G+A + Q G+ ++ TGD++ S L Q + LL + + ++T+ P
Sbjct: 84 LHPAGHIIGSAQVRLEYQ-GEIWVFTGDYKWSDDGLSQPFELL---KCDHFITESTFGLP 139
Query: 266 KYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK-ESVFLAISKALGVKIYANAS 324
Y FPS DV + R K K T+++ YS+GK +++ + ++G ++Y + +
Sbjct: 140 VYHFPSAFDVYEDINRWWKQNQNKGLNTVLL--GYSLGKAQNILKHLDTSIG-EVYLHGA 196
Query: 325 RRRVLQSF 332
V Q+
Sbjct: 197 VANVNQAL 204
>gi|149239765|ref|XP_001525758.1| hypothetical protein LELG_02316 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449881|gb|EDK44137.1| hypothetical protein LELG_02316 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 645
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 23/158 (14%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRM--------CLLVNPSYIHPLELNTE 198
+FLTH H DH GL + +YCS LT ++++ LV + +P +L+T
Sbjct: 29 FFLTHSHEDHLQGLLNQSFCKRVYCSKLTRDIIKLDPKYKNKVKYLVAKEFNNPFQLSTN 88
Query: 199 HVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS--------YPLLVN 250
V VT++E HCPG+A+ F + C L TGD RA S +P +
Sbjct: 89 AFT--VTVTMIETYHCPGSAMFLFETGNSAC-LVTGDIRAEEWWTSSLVKNRYLFPYIKG 145
Query: 251 HR-VNVLYLDTTYC---NPKYKFPSKEDVLNYVVRLTK 284
+ ++ +YLDTT+ P P D + ++ L K
Sbjct: 146 FKSLDTIYLDTTFAYRGEPYISIPPNSDGIANLINLLK 183
>gi|402218720|gb|EJT98796.1| hypothetical protein DACRYDRAFT_35001, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 216
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 47/215 (21%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHGPIYCSPLT----------------------------A 176
+ Y L+H H DH GL G + CSP A
Sbjct: 2 ALYLLSHTHVDHIRGLDASTFCGKVICSPDAKEMILRMETAKDRVDYDRGVREQKIRRWA 61
Query: 177 RLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
RL L +P+ L T V +TLL+ANHCPG+ + G LHTGD
Sbjct: 62 RLKTAVSLNSPTKFEILADET------VLITLLDANHCPGSVMFLVEGSRGAV-LHTGDV 114
Query: 237 RASRLM----QSYPLLVNH-----RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL 287
R+ +M + PLL + ++ ++LDT+ P KED + ++L +
Sbjct: 115 RSEPVMVNALRRNPLLTQYISPFKVLDAIHLDTSCFLGTVDVPPKEDAVAGFIKL---IM 171
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
PKT + A++ G ES+ A+++ L K++ +
Sbjct: 172 LYPPKTTFFINAWTWGYESMITAVARLLNAKVHVD 206
>gi|242802706|ref|XP_002484025.1| DNA repair protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218717370|gb|EED16791.1| DNA repair protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 635
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 58/244 (23%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTA 176
++ +++K+P P + FL+H H DH GL S P IYCS ++
Sbjct: 8 QAVDYFRKVPDKPAPL------------VCFLSHVHSDHLQGLESLRS--PFIYCSAVSR 53
Query: 177 RLV--------RMCLLVN------------PSYIHPLELNTEHVID-----GVKVTLLEA 211
L+ RM + P+ LNT I+ ++VTLL+A
Sbjct: 54 ELLLRLEKYPHRMNFSKGILEARKQHYGHLAKILRPIPLNTPTEIELTPLQRIRVTLLDA 113
Query: 212 NHCPGAALIHFRLQDGQCYLHTGDFRASRL----MQSYPLLVNHRVNV-----LYLDTTY 262
NHC GA + Q G+ L+TGD RA + +P LV + + +YLDTT+
Sbjct: 114 NHCAGAVMFLIEGQ-GKAILYTGDIRAESWWVNSLTRHPALVPYACGLKTLDNIYLDTTF 172
Query: 263 C---NPKYKFPSKEDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVK 318
N FPSK + + ++ +++ PK T+ + A++ G E V+ A+S L K
Sbjct: 173 AVKSNIYRYFPSKAEGVKELL----EQVQRYPKDTIFYLRAWTFGYEEVWQALSAFLDSK 228
Query: 319 IYAN 322
++ +
Sbjct: 229 VHVD 232
>gi|435851175|ref|YP_007312761.1| KH-domain/beta-lactamase-domain protein [Methanomethylovorans
hollandica DSM 15978]
gi|433661805|gb|AGB49231.1| KH-domain/beta-lactamase-domain protein [Methanomethylovorans
hollandica DSM 15978]
Length = 636
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 32/199 (16%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLL------------------ 184
A +TH H DH G L + +G P+YC+P T L+ + L
Sbjct: 237 AVVITHAHLDHQGLLPLLYRYGFEGPVYCTPPTRDLMALLQLDYIDVASKEGGRPPYSSA 296
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFRAS 239
V H + L+ E V D +K+T A H G+A+ HF + DG + TGDF+
Sbjct: 297 DVREVLKHSIVLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIGDGLHNVVFTGDFKYE 356
Query: 240 RLMQSYPLLVNH--RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ P VN RV + +++TY PS +D ++ ++ KN L Q K +V++
Sbjct: 357 KTRLFDP-AVNKFPRVESVVMESTYGGVNALQPSLQDAEGHMQQVIKNTL--QNKGIVLI 413
Query: 298 GAYSIGK-ESVFLAISKAL 315
A+++G+ + V + + A+
Sbjct: 414 PAFAVGRSQEVMIVLEDAI 432
>gi|452844322|gb|EME46256.1| hypothetical protein DOTSEDRAFT_148314, partial [Dothistroma
septosporum NZE10]
Length = 338
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 52/245 (21%)
Query: 133 VDAF-RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNP---- 187
+D F R S++ A FL+H H DH GL + IYCS T R + + L +P
Sbjct: 16 IDRFTRNASLRPPLALFLSHVHTDHLVGL-ETCKSPFIYCSSAT-REILLKLEKHPHRMN 73
Query: 188 -----------------SYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQ 225
+ P+ L T ++ ++VTL +ANHC GAA+ F ++
Sbjct: 74 FAKGILESRKQTYKGIGKLLKPIPLETPTTLELAPGRSIRVTLFDANHCVGAAM--FLIE 131
Query: 226 D-GQCYLHTGDFRAS----RLMQSYPLLVNH----------RVNVLYLDTTYC---NPKY 267
D + L+TGD R+ + PLL+ + +++ +YLDTT+ +P
Sbjct: 132 DESKTILYTGDIRSELWWVNSIIRNPLLLPYVAANEALPLKQLDTIYLDTTFASKEDPYR 191
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRR 327
FPSK D + ++R + TL A++ G E V+ A+S L +I+ + R
Sbjct: 192 HFPSKADGIKELLR---EVARYPADTLFYFDAWTFGYEEVWQALSSFLVSQIHVDDYRYG 248
Query: 328 VLQSF 332
V +S
Sbjct: 249 VYKSL 253
>gi|453086518|gb|EMF14560.1| hypothetical protein SEPMUDRAFT_63032 [Mycosphaerella populorum
SO2202]
Length = 648
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 52/239 (21%)
Query: 133 VDAFRYGSIKGCS---AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLV--------R 180
+D FR S + A FL+H H DH GL GP I+C+ T ++ R
Sbjct: 16 IDYFRQSSSQNARPALANFLSHVHSDHLQGLES--CRGPFIWCTTATREILLRLEKYPHR 73
Query: 181 MCLLV------NPSYIH--------PLELNTE-HVIDG--VKVTLLEANHCPGAALIHFR 223
M +Y H PLE T+ ++ G ++VTLL+ANHC GA +
Sbjct: 74 MNFATGILESRQQTYKHLRKLLKPIPLETPTDIELVPGRSIRVTLLDANHCVGACMFLIE 133
Query: 224 LQDGQCYLHTGDFRA----------SRLMQSYP----LLVNHRVNVLYLDTTYCNP--KY 267
DG+ L+TGD RA + +M Y L +++ +YLDTT+ N +Y
Sbjct: 134 -GDGKAILYTGDIRAEPWWVNALIRNPVMLPYACNGKALPQKQLDTIYLDTTFANKGDRY 192
Query: 268 K-FPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASR 325
+ FP+K + ++ L + + +T + A++ G E V+ A+S L +I+ + R
Sbjct: 193 RHFPTKAEGID---ELLQKVAQYPRETEFYIDAWTFGYEDVWQAVSVFLRSQIHVDDYR 248
>gi|169622121|ref|XP_001804470.1| hypothetical protein SNOG_14275 [Phaeosphaeria nodorum SN15]
gi|160704700|gb|EAT78512.2| hypothetical protein SNOG_14275 [Phaeosphaeria nodorum SN15]
Length = 467
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 23/160 (14%)
Query: 191 HPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA-----SR 240
PL L+T I+ ++VTL++ANHC GA + DGQ L+TGD RA +
Sbjct: 6 RPLPLDTPTTIELAPSNSIRVTLIDANHCIGAVMFLIE-GDGQAVLYTGDIRAETWWVNS 64
Query: 241 LMQSYPLLV-----NHRVNVLYLDTTYCN---PKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
L+Q+ P+L+ R++ +YLDTT+ P +FPSK + +N L +
Sbjct: 65 LVQN-PVLLPYTLGKRRLDCMYLDTTFATKHEPYREFPSKAEGIN---ELLDKVSQYSHD 120
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
T+ +++ G E+V+LA+S L +I+ ++ R + S
Sbjct: 121 TIFYFHSWTFGYENVWLALSVFLESQIHLDSYRAGIYGSL 160
>gi|302507780|ref|XP_003015851.1| DNA repair protein, putative [Arthroderma benhamiae CBS 112371]
gi|291179419|gb|EFE35206.1| DNA repair protein, putative [Arthroderma benhamiae CBS 112371]
Length = 751
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 47/193 (24%)
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
A+L+R L P+ I + NT ++VTL +ANHCPG+ + DG+ L+TGD
Sbjct: 19 AKLLRPIPLQVPTEIELMPGNT------IRVTLFDANHCPGSVMFLIE-GDGKAILYTGD 71
Query: 236 FRA-SRLMQSY--------------------------PLLV-----NHRVNVLYLDTTYC 263
R + + Q+Y P+L+ + R++ +YLDTT+
Sbjct: 72 IRGKATITQAYRLYSRSVFLLTVSLAESWWVQSLIRNPVLIPYTMGDRRLDTIYLDTTFA 131
Query: 264 NPK---YKFPSKEDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKI 319
FPSK + + ++ + +K P+ T+ + +++ G E V+LA+S ALG KI
Sbjct: 132 TKSDIHQVFPSKAEGIRELL----SKIKGYPEDTIFYLRSWTFGYEDVWLALSAALGTKI 187
Query: 320 YANASRRRVLQSF 332
+ + + R+ S
Sbjct: 188 HVDRYQYRLYNSL 200
>gi|149030437|gb|EDL85474.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Rattus norvegicus]
gi|149030438|gb|EDL85475.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Rattus norvegicus]
Length = 415
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 26/186 (13%)
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
+++ L + +++ LYLD T CNP PS+++ +++L +++ P+ + +G Y
Sbjct: 1 MLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEATQQIIQL----IRQFPQHNIKIGLY 56
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF 360
S+GKES+ ++ + + R ++Q L+ + +H + +
Sbjct: 57 SLGKESLLEQLALEFQTWVVLSPQRLELVQLLG---LADVFTVEEEAGRIHAVDHMEICH 113
Query: 361 ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFT 420
+ + NQ +A PT R + + +IY +PYS+HSS++
Sbjct: 114 SAMLQW-----NQTHPTIAIFPTS--------------RKIRSPHPSIYSIPYSDHSSYS 154
Query: 421 ELREFV 426
ELR FV
Sbjct: 155 ELRAFV 160
>gi|412993060|emb|CCO16593.1| predicted protein [Bathycoccus prasinos]
Length = 1523
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 40/201 (19%)
Query: 253 VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAIS 312
V+VLYLD TY NP+Y P + L +V+L +P+ V++ S+GKE + +A+S
Sbjct: 262 VDVLYLDNTYNNPEYDHPPRAVALERIVKLVTEI---EPERPVILLLDSLGKEDIVIALS 318
Query: 313 KALGVKIYANASRRRVLQSFDWPELS------GNLCTQGNDTLLHVLPMSSLKFET---- 362
+A K+Y + R DW +L N + T + VLP + + +
Sbjct: 319 QATKSKVYLHKDRYN-----DWLKLGFEKEYVCNSLGENESTRVRVLPKAMGRHKENVCG 373
Query: 363 -----LKDYLKPYGNQYAAVLAFRPTGWT------YSETVGNQLDLIRPLSRGN-----I 406
LK++ K +G L PTGW E ++D R N
Sbjct: 374 PLVAGLKNF-KEWG-----PLVISPTGWARVTEQMREEDEKQEMDTERREKMTNEEKTDW 427
Query: 407 TIYGVPYSEHSSFTELREFVQ 427
VPYS HSS++EL FV+
Sbjct: 428 VRRSVPYSLHSSYSELETFVK 448
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 18/117 (15%)
Query: 147 YFLTHFHYDHYGGLGKRW----SHGPIYCSPLTARLVRMCLLVNPSYIHPLEL------- 195
YFLTH H DH GL + ++G IYC+ +T L+ S + LE
Sbjct: 67 YFLTHMHQDHLRGLREDTFENDNNGRIYCTEITNILLVKRFPRLESKVKVLEFDSVEVVE 126
Query: 196 ------NTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYP 246
NT+ V L+A HCPG+A+ F G+ LHTGDFR S P
Sbjct: 127 VVSNKKNTKEEDLRFNVYCLDAGHCPGSAMFVFEGTFGKV-LHTGDFRREDWSGSLP 182
>gi|308476884|ref|XP_003100657.1| hypothetical protein CRE_20424 [Caenorhabditis remanei]
gi|308264675|gb|EFP08628.1| hypothetical protein CRE_20424 [Caenorhabditis remanei]
Length = 620
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 144 CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVN-----PSYIHPLELNTE 198
CS +FLTH H ++ L + ++CS T+ ++ + ++ + I P+ LN
Sbjct: 224 CSYHFLTHIHPEYLRDLD-LTADRTVFCSETTSDILPEIMGIDSKNVPANSIFPMRLNHP 282
Query: 199 HVIDGVKVTLLEANHCPGAALIHF-----RLQDGQCYLHTGDFRASRL----MQSYP--L 247
+ + + T++++NHCPG+ +I F + G L TGDFRA + ++S P
Sbjct: 283 YSFEEFQATMIDSNHCPGSVMILFEGELIQKHAGGPVLCTGDFRADKTFLSELKSGPCRF 342
Query: 248 LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNY---VVRLTKNCLKKQPKTLVVVGAYSIGK 304
L ++ +Y+D TY F +++L L +N + P +++ + +G+
Sbjct: 343 LSELKLARIYMDNTY------FSLDQNILQLDHARDLLIQNIESRYPDKNIIIPLHRLGR 396
Query: 305 ESVFLAISKALGVKIYANASRRRV 328
ES+ +I +AL I R +
Sbjct: 397 ESLIESIVQALNEPILMFKERLEI 420
>gi|283779817|ref|YP_003370572.1| hypothetical protein Psta_2038 [Pirellula staleyi DSM 6068]
gi|283438270|gb|ADB16712.1| conserved hypothetical protein [Pirellula staleyi DSM 6068]
Length = 318
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 114/282 (40%), Gaps = 33/282 (11%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
F++H H DH +H +PLTA L R + L D ++
Sbjct: 27 FISHAHSDHMA------AHELAIGTPLTAALYRR--RYGDKLVRELPFEQPWQWDEFSLS 78
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
A H G+A++H D Q L+TGDFR M + H ++L ++ T+ P Y
Sbjct: 79 THPAGHIAGSAMLHVAASD-QSLLYTGDFRLRESMTAETPRCPH-ADILVMECTFGQPHY 136
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAI--SKALGVKIYANASR 325
KFP +E ++ + L++Q + V+ AY GK AI L VK++ +
Sbjct: 137 KFPPRELASEQLIDIVSQTLRRQ--EVPVIHAYVTGKAQEVTAILAHAGLPVKVHPLVAE 194
Query: 326 RRVLQSFDWPELSG-NLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTG 384
+ + ++ + T + +++ P S K L L P + AV TG
Sbjct: 195 VNAITAAHGIKIGNYGVATSLTEGFVYIAPPRSQKAMPL---LGPVAKRTIAV-----TG 246
Query: 385 WTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
W T R R + Y V S+H+ + EL E V
Sbjct: 247 WAIDPT-------WRTRQRYD---YAVVLSDHADYDELLECV 278
>gi|134054879|emb|CAK36892.1| unnamed protein product [Aspergillus niger]
Length = 871
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 82/152 (53%), Gaps = 25/152 (16%)
Query: 190 IHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQ-DGQCYLHTGDFRAS---- 239
+ P+ LNT +D ++ TL +ANHC GA + F ++ +G+ L+TGD RA
Sbjct: 166 LRPIPLNTPTELDLTPRLSIRATLFDANHCTGAVM--FLIEGNGKAILYTGDIRAEPWWV 223
Query: 240 RLMQSYPLLV-----NHRVNVLYLDTTYCNPK---YKFPSKEDVLNYVVRLTKNCLKKQP 291
+ P+L+ N +++ +Y+D T+ P + FPSK + L ++ N ++ P
Sbjct: 224 NSIIRNPVLIPYTLGNKQLDNIYIDNTFARPSHVCHTFPSKAEGLKELL----NKIQAYP 279
Query: 292 -KTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
+T + A++ G E V++A+S AL KI+ +
Sbjct: 280 DRTTFYLRAWTFGYEEVWMALSAALNSKIHVD 311
>gi|429848498|gb|ELA23972.1| DNA repair protein [Colletotrichum gloeosporioides Nara gc5]
Length = 638
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 49/245 (20%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTA----RLVRMCLLVN----------PSYI 190
A FL+H H DH GL S P +YCS T RL R +N +Y
Sbjct: 30 ACFLSHIHSDHLAGLESLRS--PFVYCSAATREMLLRLERYPCRINYAKGILEARVQTYK 87
Query: 191 HPLELNTEHVIDG-----------VKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFRA 238
H L +D ++VTLL+ANHCPG+ + F ++D L+TGD R+
Sbjct: 88 HLKNLLKPLPLDTPTTLELAPGRCIQVTLLDANHCPGSVM--FLIEDTHHAVLYTGDIRS 145
Query: 239 S----RLMQSYPLLVNHRVNV-----LYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK 289
+ P +V + + +YLDT++ F +K N + L +
Sbjct: 146 EPWFVNAVARNPAVVEYTCGIKTLDKIYLDTSFIQ-NVPFQTKA---NGIAELLRKVALY 201
Query: 290 QPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
T+ + A++ G E V++A+SKAL +I+ + + RV S L+G +
Sbjct: 202 PDDTIFHIQAWTYGYEQVWIALSKALRSRIHVDDYKMRVFSS-----LTGKASNDRFSSS 256
Query: 350 LHVLP 354
+H+ P
Sbjct: 257 IHLCP 261
>gi|46121907|ref|XP_385507.1| hypothetical protein FG05331.1 [Gibberella zeae PH-1]
Length = 600
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 96/227 (42%), Gaps = 35/227 (15%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCS-PLTARLVRMCLLVNPSYIHPLELNTEHVI--- 201
A FL+H H DH GL S Y L AR L PLE T +
Sbjct: 22 ACFLSHVHSDHLAGLESLRSPLINYGKGVLEARQQTFKHLSKVLRSLPLETPTSIELCPG 81
Query: 202 DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----RLMQSYPLLVNHRVNVLY 257
++VTL +ANHCPGA + DG+ L+TGD R+ ++ P L+ + +
Sbjct: 82 REIQVTLFDANHCPGAVMFLVE-GDGKAILYTGDIRSEPWFVNAIERNPNLIEYTSGLKT 140
Query: 258 LDTTYCNPKYKFPSKEDV-----LNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAIS 312
LD Y + + EDV + L K K T+ A++ G E V++A+S
Sbjct: 141 LDKIYLDTSF----TEDVPFETKAQGITELLKKISKYPNDTVFHFQAWTYGYEDVWIALS 196
Query: 313 KALGVKIYANASRRRVLQSF-----------------DWPELSGNLC 342
KAL KI+ + + R+ S + P L+G++C
Sbjct: 197 KALKSKIHVDDYKLRIYGSLKSRNPRSQFDADMHLAPESPALTGHMC 243
>gi|119576987|gb|EAW56583.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae), isoform
CRA_b [Homo sapiens]
Length = 297
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 26/186 (13%)
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
+++ L + +++ LYLD T CNP PS+++ + +V+L ++K P+ + +G Y
Sbjct: 1 MLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQL----IRKHPQHNIKIGLY 56
Query: 301 SIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKF 360
S+GKES+ + AL + + S RR L+ L+ + +H + +
Sbjct: 57 SLGKESLLEQL--ALEFQTWVVLSPRR-LELVQLLGLADVFTVEEKAGRIHAVDHMEICH 113
Query: 361 ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFT 420
+ + NQ +A PT R + + I+ +PYS+HSS++
Sbjct: 114 SNMLRW-----NQTHPTIAILPTS--------------RKIHSSHPDIHVIPYSDHSSYS 154
Query: 421 ELREFV 426
ELR FV
Sbjct: 155 ELRAFV 160
>gi|413952238|gb|AFW84887.1| hypothetical protein ZEAMMB73_126664 [Zea mays]
Length = 205
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 53/106 (50%), Gaps = 17/106 (16%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK--RWSHGPIYCSPLTARLVRMCLL-VNPS 188
+VD F GS AYFLTH H DH GLG W HGP+YCSP TARL+ + ++ S
Sbjct: 7 SVDKFSGGS----QAYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLLPIRFPGIDAS 62
Query: 189 YIHPLELNTEHVI----------DGVKVTLLEANHCPGAALIHFRL 224
+ PL I + VT + A HCPG + + RL
Sbjct: 63 LLRPLAPGASASIYLFSPSSGQSLSLHVTAIPALHCPGTSPLPIRL 108
>gi|18314051|ref|NP_560718.1| hypothetical protein PAE3418 [Pyrobaculum aerophilum str. IM2]
gi|18161631|gb|AAL64900.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 314
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 37/225 (16%)
Query: 201 IDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDT 260
I GV++ +LEA H G+ +++ DG L TGDF + + + R +VL ++
Sbjct: 84 IGGVQIAVLEAGHILGS-VMYLAEVDGVQILVTGDFNTAGSILTDAAEPIERPDVLVMEA 142
Query: 261 TYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIY 320
TY +P Y FP++ +V + + + + + V + AY +GK I+K LG K
Sbjct: 143 TYGDPSYVFPNRAEVYEEFLDVVERGISEGG---VAISAYPLGKAQ---EIAKLLGNKAG 196
Query: 321 ANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAF 380
A+AS + ++ P +G+ V+ + +LK +Y K
Sbjct: 197 AHASVAKYNKALGIPTGNGD----------EVIVVPNLK-AAPPNYFK-----------I 234
Query: 381 RPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREF 425
+GW E + +SRG +YG+P S+HS F L EF
Sbjct: 235 DVSGWYADERLRKNA-----ISRG---VYGIPLSDHSDFPSLVEF 271
>gi|326489183|dbj|BAK01575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 529
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 120/316 (37%), Gaps = 69/316 (21%)
Query: 146 AYFLTHFHYDH---------YGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELN 196
AY LTHFH DH Y L + YCSP+T + + C Y H E
Sbjct: 31 AYILTHFHDDHMKNLEDYQFYRLLKENVDRVKFYCSPITKKFIETC----EKYSHLSEFC 86
Query: 197 TE---------HVIDG--VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR-----ASR 240
TE H+ + V T + HCPG+ ++ G L TGDFR ASR
Sbjct: 87 TEIPCESPFIIHISNAETVTATFCGSGHCPGSVMVFMEGLRGNV-LFTGDFRLPLYCASR 145
Query: 241 L-------------------------MQSYPLLVNHRVNVLYLDTTYCNPKYK-FPSKED 274
L S P V+ LY+D T+ P+ K P++E+
Sbjct: 146 LPFFKESSLASRDLFSIPTASQKATKNNSNPEYNAKNVDDLYVDMTFFKPEIKTIPTREE 205
Query: 275 VLNYVVRLTKNCLKKQP-------KTLVVVGAYS-IGKESVFLAISKALGVKIYANASRR 326
+ +V+ K + + + LV + + IG E V+ I + G K++ N
Sbjct: 206 SVQVLVKFIKEFISQNNEKKMGYFQNLVYMKTSARIGYEYVYQTIYSSTGYKVHVNNLIY 265
Query: 327 RVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYL--KPYGNQYAAVLAFRPTG 384
++ P + L +T +H + K + K L P+GN+ A R
Sbjct: 266 KIYDK--MPMIQSALTVDPYETPIHCCIYENKKRDVRKTDLMSSPFGNKKQQCNA-RNDF 322
Query: 385 WTYSETVGNQLDLIRP 400
S +V ++ RP
Sbjct: 323 CINSNSVSSEARKTRP 338
>gi|227540441|ref|ZP_03970490.1| exonuclease of the beta-lactamase fold involved in RNA processing
[Sphingobacterium spiritivorum ATCC 33300]
gi|227239765|gb|EEI89780.1| exonuclease of the beta-lactamase fold involved in RNA processing
[Sphingobacterium spiritivorum ATCC 33300]
Length = 333
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 16/188 (8%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+TH H DH RW G +C P + ++R+ L V + + ++ ++GVK++
Sbjct: 30 LITHAHSDH-----ARWGMGHYWCHPDSIPILRLRLGVENN-VTGMKYGEVMSVNGVKIS 83
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASR--LMQSYPLLVNHRVNVLYLDTTYCNP 265
L A H G+A + Q G+ ++ TGD++ S L Q + LL + + ++T+ P
Sbjct: 84 LHPAGHIIGSAQVRLEYQ-GEVWVFTGDYKWSDDGLSQPFELL---KCDHFITESTFGLP 139
Query: 266 KYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK-ESVFLAISKALGVKIYANAS 324
Y FPS DV + R K K T+++ YS+GK +++ + ++G ++Y + +
Sbjct: 140 VYHFPSAFDVYEDINRWWKQNQDKGLNTVLL--GYSLGKAQNILKHLDTSIG-EVYLHGA 196
Query: 325 RRRVLQSF 332
V Q+
Sbjct: 197 VANVNQAL 204
>gi|347523621|ref|YP_004781191.1| hypothetical protein Pyrfu_1071 [Pyrolobus fumarii 1A]
gi|343460503|gb|AEM38939.1| hypothetical protein Pyrfu_1071 [Pyrolobus fumarii 1A]
Length = 336
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 139 GSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLV-RMCLLVNPSYIHPLELN 196
G + G +TH H DH G+ + P I +PLT ++ + + + PL +
Sbjct: 29 GHMPGALVRIVTHAHVDHLVGMRESLRETPFIAATPLTLEMLPELGYRIPRAKQLPLAHH 88
Query: 197 TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVL 256
E + G +V LL ANH PGAA + +DG +TGDF+ P++ + ++VL
Sbjct: 89 IETELMGYRVKLLPANHIPGAAQVLVEWEDGFRVGYTGDFKQP----GTPVMKD--LDVL 142
Query: 257 YLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
++ TY P+++ P ++ L ++ L K P
Sbjct: 143 VIEATYGRPEHRRPWSMEIEYIFADLVRDLLVKGP 177
>gi|119872485|ref|YP_930492.1| mRNA 3-end processing factor [Pyrobaculum islandicum DSM 4184]
gi|119673893|gb|ABL88149.1| putative mRNA 3-end processing factor [Pyrobaculum islandicum DSM
4184]
Length = 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 39/227 (17%)
Query: 201 IDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDT 260
+DGV + +LEA H G+ + + D Q L TGDF + + + + ++L +D
Sbjct: 84 LDGVHIAVLEAGHILGSVMYLVEIDDLQV-LFTGDFNTTGTILTDAAEPVDKPDILVMDA 142
Query: 261 TYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIY 320
TY +P Y FP++ +V N ++ + + +V AY +GK ++K G +
Sbjct: 143 TYGDPAYIFPNRAEVYNELLDVVERYTTSGKVAIV---AYPLGKAQ---EVAKLFGTRAG 196
Query: 321 ANASRRRVLQSFDWPE-LSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLA 379
A+ + R ++ P + N+ + L P K E
Sbjct: 197 AHITVARYNRALGIPTGMEKNVVIVPS---LRSAPTGYFKVEV----------------- 236
Query: 380 FRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+GW ET + RG +YG+P S+HS F L EFV
Sbjct: 237 ---SGWYAEETTKRE-----AAKRG---VYGIPLSDHSDFPSLVEFV 272
>gi|449302733|gb|EMC98741.1| hypothetical protein BAUCODRAFT_379459 [Baudoinia compniacensis
UAMH 10762]
Length = 833
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 53/229 (23%)
Query: 143 GCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA----RLVRMCLLVN----------PS 188
G A FL+H H DH GL + + IYCSP T RL + +N +
Sbjct: 23 GALACFLSHVHSDHLRGL-ESFRSPFIYCSPATRDILLRLEKYPHRMNFAKGILESRKQT 81
Query: 189 YIH------PLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQ-DGQCYLHTGDF 236
Y H P+ L T I+ ++VTL ANHC GA + F ++ G+ ++GD
Sbjct: 82 YKHLAKLLKPIPLETPTTIELTPGNSIRVTLFNANHCVGA--VCFLIEGSGKAIFYSGDV 139
Query: 237 RAS----RLMQSYPLLVNH------------RVNVLYLDTTYC---NPKYKFPSKEDVLN 277
RA L+ P ++ + +++ +YLDTT+ P +FPSK + L+
Sbjct: 140 RAENWWVNLLIRNPFIIPYVPSPTHGGPPLKQLDCIYLDTTFAVKDEPYKQFPSKAEGLS 199
Query: 278 YVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYANASR 325
++ + K PK T+ A++ G E V+LA+S L +++ + R
Sbjct: 200 ELLL----AVSKYPKDTVYYFDAWTFGYEEVWLALSSFLDSQVHVDDYR 244
>gi|196231624|ref|ZP_03130482.1| DNA ligase I, ATP-dependent Dnl1 [Chthoniobacter flavus Ellin428]
gi|196224477|gb|EDY18989.1| DNA ligase I, ATP-dependent Dnl1 [Chthoniobacter flavus Ellin428]
Length = 894
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
F++H H DH H S TARL++ L H LE ++T
Sbjct: 29 FVSHAHADHIA------RHPEFIASAGTARLMQ-ARLGGERQGHILEFGQPASFRDFQIT 81
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
LL A H G+A + G L+TGDF+ R + + P H L ++TTY PKY
Sbjct: 82 LLPAGHIFGSAQSLIESEHG-SLLYTGDFKLRRGLSAEPTEWRH-AETLIMETTYGLPKY 139
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK-ESVFLAISKA 314
+ P E V+ +V + L+ + V+ YS+GK + + AI KA
Sbjct: 140 RLPPTEAVMARMVAFCQESLED--GAVPVLLGYSLGKAQEILCAILKA 185
>gi|386002906|ref|YP_005921205.1| RNA-metabolising metallo-beta-lactamase [Methanosaeta harundinacea
6Ac]
gi|357210962|gb|AET65582.1| RNA-metabolising metallo-beta-lactamase [Methanosaeta harundinacea
6Ac]
Length = 635
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 40/203 (19%)
Query: 146 AYFLTHFHYDHYG---GLGKRWSHGPIYCSPLTARLV----------------RM---CL 183
A LTH H DH G L K GPIYC+P T L RM
Sbjct: 237 AVVLTHAHLDHAGLVPMLYKYGYEGPIYCTPPTRDLFVLLQLDYIDIAGREGKRMPYESA 296
Query: 184 LVNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLH-TGDFR-- 237
++ + H + LN V D K+T+ A H G+++ HF + DG + TGDF+
Sbjct: 297 MIREALKHTITLNYGDVTDIAPDTKLTMHNAGHILGSSICHFHVGDGLYNVAFTGDFKFE 356
Query: 238 ASRL----MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+RL + ++P R+ L ++ TY PS+++ ++++ ++ +K+ K
Sbjct: 357 KTRLFDPAVHTFP-----RLETLVMEATYGGSNSTQPSRKEAEGRLLKVVRDTIKRGGK- 410
Query: 294 LVVVGAYSIGK-ESVFLAISKAL 315
V++ A+++G+ + V +A+ +A+
Sbjct: 411 -VIIPAFAVGRSQEVMIALEEAI 432
>gi|15679214|ref|NP_276331.1| cleavage and polyadenylation specificity factor
[Methanothermobacter thermautotrophicus str. Delta H]
gi|333944120|pdb|2YCB|A Chain A, Structure Of The Archaeal Beta-Casp Protein With
N-Terminal Kh Domains From Methanothermobacter
Thermautotrophicus
gi|333944121|pdb|2YCB|B Chain B, Structure Of The Archaeal Beta-Casp Protein With
N-Terminal Kh Domains From Methanothermobacter
Thermautotrophicus
gi|2622312|gb|AAB85692.1| cleavage and polyadenylation specificity factor
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 636
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 49/227 (21%)
Query: 117 DRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG---PIYCSP 173
D++ Y +P FT+D+ A +TH H DH G L + +G P+YC+
Sbjct: 218 DKNSYPYLNVP--EFTLDSL--------DAVIITHAHLDHSGFLPYLYHYGYDGPVYCTA 267
Query: 174 LTARLVRMCLLVNPSYIH----PLELNTEHVIDGVK------------------VTLLEA 211
T L+ + L + H PL N +HV VK +TL A
Sbjct: 268 PTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNA 327
Query: 212 NHCPGAALIHFRLQDGQ-CYLHTGDFR--ASRLMQS----YPLLVNHRVNVLYLDTTYCN 264
H G+A+ H + DGQ ++TGDF+ SRL+++ +P R+ L +++TY
Sbjct: 328 GHILGSAMAHLHIGDGQHNMVYTGDFKYEQSRLLEAAANRFP-----RIETLVMESTYGG 382
Query: 265 PKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAI 311
+ PS+ +V+ + L++ K L+ V +++G+ + +
Sbjct: 383 HEDVQPSRNRAEKELVKTIYSTLRRGGKILIPV--FAVGRAQELMIV 427
>gi|238486418|ref|XP_002374447.1| DNA repair protein, putative [Aspergillus flavus NRRL3357]
gi|220699326|gb|EED55665.1| DNA repair protein, putative [Aspergillus flavus NRRL3357]
Length = 738
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 23/151 (15%)
Query: 190 IHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQ-DGQCYLHTGDFRASRL-- 241
+ P+ LNT I+ ++VTLL+ANHC GA + F ++ G+ L+TGD RA
Sbjct: 22 LRPIPLNTPTEIELTPRLSIRVTLLDANHCTGAVM--FLIEGSGKSILYTGDIRAESWWV 79
Query: 242 --MQSYPLLV-----NHRVNVLYLDTTYCNPK---YKFPSKEDVLNYVVRLTKNCLKKQP 291
+ +P+L+ R++ +YLD+T+ FPSK N + L +
Sbjct: 80 DSLIRHPVLIPYTLGGRRLDKIYLDSTFARHSSIYRTFPSK---ANGLAELLQKVASYSE 136
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
T A++ G E V++A+S AL KI+ +
Sbjct: 137 DTTFYFRAWTFGYEEVWMALSAALNSKIHVD 167
>gi|358372094|dbj|GAA88699.1| DNA repair protein [Aspergillus kawachii IFO 4308]
Length = 737
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 25/152 (16%)
Query: 190 IHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQ-DGQCYLHTGDFRAS---- 239
+ P+ LNT +D ++VTL +ANHC GA + F ++ +G+ L+TGD RA
Sbjct: 33 LRPIPLNTPTELDLTPRLSIRVTLFDANHCTGAVM--FLIEGNGKAILYTGDIRAEPWWV 90
Query: 240 RLMQSYPLLVNHRVNV-----LYLDTTYCNPK---YKFPSKEDVLNYVVRLTKNCLKKQP 291
+ P+LV + + + +Y+D T+ P + FPSK + L ++ N ++ P
Sbjct: 91 NSIIRNPVLVPYTLGIKQLDNIYIDNTFARPSHVCHTFPSKAEGLKELL----NKVQGYP 146
Query: 292 -KTLVVVGAYSIGKESVFLAISKALGVKIYAN 322
T + A++ G E V++A+S AL KI+ +
Sbjct: 147 DSTTFYLRAWTFGYEEVWMALSAALNSKIHVD 178
>gi|401428799|ref|XP_003878882.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495131|emb|CBZ30435.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 670
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 84/218 (38%), Gaps = 75/218 (34%)
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVIDGV-KVTLLEANHCPGAALIHFRLQDGQCYL 231
P T R+ L+NP E DG+ V L+ ANHCPGA + F L
Sbjct: 21 PETPHHARVQALLNPPASSSTGQAHEKTGDGMFAVRLILANHCPGAVMFLFASPVFGTVL 80
Query: 232 HTGDFR-------------ASRLMQSY----PLL-------------------------- 248
HTGDFR +S Q+Y P L
Sbjct: 81 HTGDFRFNGSRETWHQFVRSSNGRQTYVPPLPCLIKRGEEQDASTVTAPAVAAPPAPFYE 140
Query: 249 -----------VNHR--VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL-------- 287
V HR ++VL LD T+C P Y+FPS+ +V V+ + ++
Sbjct: 141 QFIADDEALRDVAHRQLLDVLLLDNTFCAPAYRFPSQWEVTQRVIEVLRSLFHRAACRAG 200
Query: 288 ----------KKQPKTLVVVGAYSIGKESVFLAISKAL 315
++Q + V++G+Y+IGKE V LA+ A
Sbjct: 201 VAVPSTGHPQRRQVRCAVLIGSYTIGKERVALALRDAF 238
>gi|321471014|gb|EFX81988.1| hypothetical protein DAPPUDRAFT_49525 [Daphnia pulex]
Length = 288
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGK-------RWSHGP-IYCSPLTARLVRMCLLVN--PSY 189
+++ A FL+H H DH GL R G IYCS T +++ + + Y
Sbjct: 26 NVQSSLALFLSHCHADHMKGLDSHDLYHTVRTKPGLFIYCSGTTKKILTDWPIYSKLAPY 85
Query: 190 IHPLELNTEHVID--------------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
LELN ID G VT + + HCPG+ + + G L+TGD
Sbjct: 86 FKVLELNHTVKIDFPGGYCSDDNSSKIGFCVTSIPSGHCPGSVMFLYEGPFGTV-LYTGD 144
Query: 236 FRA----SRLMQSY------PLLVNHRVNVLYLDTTYCNPKYK-FPSKEDVLNYVVRLTK 284
FR SR Q++ P ++ +YLD T+C K FPS++ ++ + L
Sbjct: 145 FRIAKGDSRKFQAFMSNPSRPEYGLKTIDHVYLDCTFCTDSAKTFPSRQTSVDVTIDLVS 204
Query: 285 NCLKKQP--KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRV 328
+ + K P K L + G E +F+ + + L ++++ + + ++
Sbjct: 205 SWIAKSPEHKVLFTLAGRGFGAEFLFVEVYRKLKLQVHTSDFKHQI 250
>gi|410721908|ref|ZP_11361230.1| KH-domain/beta-lactamase-domain protein [Methanobacterium sp.
Maddingley MBC34]
gi|410598026|gb|EKQ52618.1| KH-domain/beta-lactamase-domain protein [Methanobacterium sp.
Maddingley MBC34]
Length = 634
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 29/193 (15%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLLVNPSYIH----PLELNTE 198
A ++H H DH G L + +G P+YC+ T L+ + L + H PL N +
Sbjct: 236 AVIISHAHLDHSGFLPYLFHYGYEGPVYCTTPTRDLMTLLQLDHIDIAHREDSPLPFNVK 295
Query: 199 HVIDGVK------------------VTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFRAS 239
HV +K +TL A H G+A+ H + DGQ +++TGDF+
Sbjct: 296 HVKKSIKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAITHMHIGDGQHNFVYTGDFKYE 355
Query: 240 RLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
R P + R+ L +++TY + P++ D +++ + L+++ K L+ V
Sbjct: 356 RSRLLEPAVSKFPRIESLVMESTYGGHEDVQPTRNDAEKELIKTIYHTLERKGKILIPV- 414
Query: 299 AYSIGKESVFLAI 311
+++G+ + +
Sbjct: 415 -FAVGRAQELMIV 426
>gi|350286570|gb|EGZ67817.1| hypothetical protein NEUTE2DRAFT_95709, partial [Neurospora
tetrasperma FGSC 2509]
Length = 572
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----RLMQSYPL 247
P+EL E + ++VTLL+ANHCPGA + F Q G+ L+TGD R+ + P
Sbjct: 60 PVELELEPG-NHIQVTLLDANHCPGAVMFLFEGQ-GKAALYTGDIRSEPWHVNAIARSPS 117
Query: 248 LVNHRVNVLYLDTTYCNPKY----KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIG 303
+V + + LDT Y + + +FP+K ++ L + P T+ A++ G
Sbjct: 118 MVQYAYGLKTLDTIYLDTSFIEDIEFPTKAQGIS---ELLDKISRYPPNTIFHFQAWTYG 174
Query: 304 KESVFLAISKAL 315
E V++A+SKAL
Sbjct: 175 YEDVWVALSKAL 186
>gi|396480802|ref|XP_003841086.1| hypothetical protein LEMA_P090160.1 [Leptosphaeria maculans JN3]
gi|312217660|emb|CBX97607.1| hypothetical protein LEMA_P090160.1 [Leptosphaeria maculans JN3]
Length = 694
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 47/227 (20%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTA----RLVRMCLLVN-------------- 186
A FL+H H DH GL P +YCS T RL + +N
Sbjct: 30 ACFLSHVHSDHLTGLESL--RAPFVYCSAATREILLRLEKYHYRINFAKGVLESRNVTYD 87
Query: 187 ---PSYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA 238
PL L+T I+ ++VT ++ANHC GA + DG+ L+TGD RA
Sbjct: 88 RCMRRLAKPLPLDTPTTIELAPGNIIRVTCIDANHCVGAVMFLIE-GDGKAILYTGDIRA 146
Query: 239 -----SRLMQSYPLLVNH-----RVNVLYLDTTYCNPK---YKFPSKEDVLNYVVRLTKN 285
+ L+Q+ PLL+ + R++ +YLDTT+ +FP K + + L
Sbjct: 147 EIWWVNSLVQN-PLLLPYTLGPRRLDCMYLDTTFATKSESYREFPGKAEGIR---ELLAK 202
Query: 286 CLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
T+ A++ G E+V++A+S L +I+ + R R+ S
Sbjct: 203 ISSYSDDTIFYFHAWTFGYENVWIALSNFLKSRIHLDDYRSRIYGSL 249
>gi|304315326|ref|YP_003850473.1| metal-dependent RNase [Methanothermobacter marburgensis str.
Marburg]
gi|302588785|gb|ADL59160.1| predicted metal-dependent RNase [Methanothermobacter marburgensis
str. Marburg]
Length = 636
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 49/227 (21%)
Query: 117 DRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG---PIYCSP 173
DR+ Y +P FT+D+ A +TH H DH G L + +G P+YC+
Sbjct: 218 DRNSYPYLNVP--EFTLDSL--------DAVIITHAHLDHSGFLPYLYHYGYDGPVYCTA 267
Query: 174 LTARLVRMCLLVNPSYIH----PLELNTEHVIDGVK------------------VTLLEA 211
T L+ + L + H PL N +HV VK +TL A
Sbjct: 268 PTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNA 327
Query: 212 NHCPGAALIHFRLQDGQ-CYLHTGDFR--ASRLMQ----SYPLLVNHRVNVLYLDTTYCN 264
H G+A+ H + DGQ ++TGDF+ SRL++ +P R+ L +++TY
Sbjct: 328 GHILGSAMAHLHIGDGQHNMVYTGDFKYEQSRLLEPAASRFP-----RIETLVMESTYGG 382
Query: 265 PKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAI 311
+ P + +V+ + LK+ K L+ V +++G+ + +
Sbjct: 383 HEDVQPPRTRAEKELVKTIYSTLKRGGKILIPV--FAVGRAQELMIV 427
>gi|409081145|gb|EKM81504.1| hypothetical protein AGABI1DRAFT_69756 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 866
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 111/272 (40%), Gaps = 41/272 (15%)
Query: 184 LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA----- 238
L+ P +H L + V +T L+ANHCPGA + G LHTGDFRA
Sbjct: 114 LLKPIRVHEPTLFELSNNERVTITALDANHCPGAVMYLIEGSKG-AVLHTGDFRAEPWFL 172
Query: 239 ---SR-------LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
SR L S +++ ++ +YLDT + PSK D ++ L K
Sbjct: 173 ESLSRNPYLQPYLESSTGGILHQSLDCIYLDTACAFLPLEIPSKNDATAGLIELMKLF-- 230
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNL-----CT 343
P + A++ G E + A+S A KI+ + + ++ Q+ P + + CT
Sbjct: 231 -PPNVYFYINAWTWGYEDILKAVSAAFQTKIHVDRYKYKIYQNISDPYMRLIVTRDPGCT 289
Query: 344 QGN-----DTLLHVLPMSSLKFETLKDYLKPYGNQ--YAAVLAFRPTGWTYSETVGNQLD 396
+ + D HVL + +FE L G + Y + W V Q
Sbjct: 290 RFHACERFDRCDHVLVDNDDEFENSTSRL---GKRVIYINPVTMESASWDLYFQVVKQA- 345
Query: 397 LIRPLSRGNITIYG--VPYSEHSSFTELREFV 426
L G+ I VP S HS+ ELR FV
Sbjct: 346 ----LIDGDEKINDLLVPLSRHSTLPELRAFV 373
>gi|255513745|gb|EET90010.1| beta-lactamase domain protein [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 655
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 33/194 (17%)
Query: 140 SIKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCL-----LVNPSYIH 191
SI A LTH H DH G L K GP+YC+P T L + L LV S
Sbjct: 251 SINEIDAVILTHGHMDHMGFVPYLFKYGYEGPVYCTPPTRDLAALLLTDYTRLVQKSGGT 310
Query: 192 PLELNTE-----------------HVIDGVKVTLLEANHCPGAALIHFRLQDGQ-CYLHT 233
PL + ++ D +K+T A H G+A +H + +G +HT
Sbjct: 311 PLYGEKDIKKMLLHMITRDYGEVTNITDELKLTYHNAGHILGSATVHLHVGEGMYNIVHT 370
Query: 234 GDFR--ASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
GD + +RL+ P V + RV+ L++++TY P+ ++ D ++ L K + +
Sbjct: 371 GDMKYGFTRLLD--PASVKYPRVDALFIESTYGGPRDISQNRHDTERELMELIKRTINRN 428
Query: 291 PKTLVVVGAYSIGK 304
K L+ + +++G+
Sbjct: 429 GKVLIPL--FAVGR 440
>gi|170101134|ref|XP_001881784.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643139|gb|EDR07392.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 976
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 108/299 (36%), Gaps = 71/299 (23%)
Query: 120 CPFYKKIPGTPFTVDAFRYGSI-----KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPL 174
PF IP VD F + + + LTH H DH GL + +YCS
Sbjct: 5 TPFNACIPPYNIRVDEFASSAALEELGTTPALHLLTHTHSDHINGLSAKSFGHTVYCSQD 64
Query: 175 TARLVRMCLLVNPSYIHPLELNTEHV---------------------------------- 200
++ + +H LEL E V
Sbjct: 65 AKEMLLRHEVFAERELHELELRAEKVRTYSHLKVDPLLFPDGTMYYTGSRDLLKTLPLHT 124
Query: 201 -----IDG---VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA----------SRLM 242
I G V +TLL+ANHCPGA + Q G LHTGDFRA + +
Sbjct: 125 PTKMDISGDEAVTITLLDANHCPGAVMFLIEGQRG-AILHTGDFRAEPWFLDSIVRNPFL 183
Query: 243 QSY--------PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTL 294
Q Y P ++ + +YLDT P+K + ++ L +K P ++
Sbjct: 184 QPYLYQGPDSVPFTISKTLEAIYLDTACVLSPLAVPTKGCATSGLIEL----MKVFPSSV 239
Query: 295 -VVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
+ +++ G E V AI+++ KI+ + + + Q P L + T H
Sbjct: 240 YFFINSWTWGYEDVLKAIAQSFQSKIHVDRYKYSIYQHLSDPFLRLITTRDSSSTRFHA 298
>gi|302652334|ref|XP_003018020.1| DNA repair protein [Trichophyton verrucosum HKI 0517]
gi|291181619|gb|EFE37375.1| DNA repair protein [Trichophyton verrucosum HKI 0517]
Length = 193
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 47/180 (26%)
Query: 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
A+L+R L P+ I + NT +KVTL +ANHCPG+ + DG+ L+TGD
Sbjct: 19 AKLLRPIPLQVPTKIELMPGNT------IKVTLFDANHCPGSVMFLVE-GDGKAILYTGD 71
Query: 236 FRA-SRLMQSY--------------------------PLLV-----NHRVNVLYLDTTYC 263
R + + QSY P+L+ + R++ +Y DTT+
Sbjct: 72 IRGKATITQSYKHDSRSVFLLTISLAESWWVQSLIRNPVLIPYTMGDRRLDTIYFDTTFA 131
Query: 264 NPK---YKFPSKEDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKI 319
FPSK + +R + +K P+ T+ + +++ G E V+LA+S ALG K+
Sbjct: 132 TKSDIHQVFPSKAE----GIRELLSKIKGYPEDTIFYLRSWTFGYEDVWLALSAALGTKV 187
>gi|426196379|gb|EKV46307.1| hypothetical protein AGABI2DRAFT_222438 [Agaricus bisporus var.
bisporus H97]
Length = 866
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 111/272 (40%), Gaps = 41/272 (15%)
Query: 184 LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA----- 238
L+ P +H L + V +T L+ANHCPGA + G LHTGDFRA
Sbjct: 114 LLKPIRVHEPTLFELSNNERVTITALDANHCPGAVMYLIEGSKG-AVLHTGDFRAEPWFL 172
Query: 239 ---SR-------LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
SR L S +++ ++ +YLDT + PSK D ++ L K
Sbjct: 173 ESLSRNPYLQPYLESSTGGILHQSLDCIYLDTACAFLPLEIPSKNDATAGLIELMKLF-- 230
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNL-----CT 343
P + A++ G E + A+S A KI+ + + ++ Q+ P + + CT
Sbjct: 231 -PPNVYFYINAWTWGYEDILKAVSAAFQTKIHVDRYKYKIYQNISDPYMRLIVTRDPGCT 289
Query: 344 QGN-----DTLLHVLPMSSLKFETLKDYLKPYGNQ--YAAVLAFRPTGWTYSETVGNQLD 396
+ + D HVL + +FE L G + Y + W V Q
Sbjct: 290 RFHACERFDRCDHVLVDNDDEFENSTSRL---GKRVIYINPVTMESASWDLYFQVVKQA- 345
Query: 397 LIRPLSRGNITIYG--VPYSEHSSFTELREFV 426
L G+ I VP S HS+ ELR FV
Sbjct: 346 ----LIDGDEKINDLLVPLSRHSTLPELRAFV 373
>gi|324521179|gb|ADY47798.1| Protein artemis, partial [Ascaris suum]
Length = 336
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 14/175 (8%)
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR----- 240
N + I P + N+ ++ +T ++A HCPG+ +I G+ L+TGDFR +
Sbjct: 106 NTTEIQPTKSNS---LNAADITFIDAKHCPGSIMILLEFDRGKRVLYTGDFRFVKDDWLS 162
Query: 241 ---LMQSYPLLVNHRVNVLYLDTTYCNPKYK-FPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
L R++ LY D+T+C + PS++ VR+ K L +P+ V+
Sbjct: 163 CKILRDPENSSTFKRIDELYFDSTFCRRGSEVIPSRKQSGVLFVRMVKEWLDARPENKVL 222
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
+ + + G E + A+ L V+ + + R+ + E++ + + + T +H
Sbjct: 223 IWSSNYGHEFLLRALFDELNVQTHVTMQKFRIYSNI--AEIAPCVTSIASSTRVH 275
>gi|330508618|ref|YP_004385046.1| RNA-metabolising metallo-beta-lactamase [Methanosaeta concilii GP6]
gi|328929426|gb|AEB69228.1| RNA-metabolising metallo-beta-lactamase [Methanosaeta concilii GP6]
Length = 635
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 30/202 (14%)
Query: 146 AYFLTHFHYDHYG---GLGKRWSHGPIYCSPLTARLVRMCLL------------------ 184
A LTH H DH G L K GPIYC+P T L + L
Sbjct: 237 AVVLTHAHLDHAGLVPMLYKYGYEGPIYCTPPTRDLFVLLQLDYIEIAGREGNRLPYDSG 296
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLH-TGDFRAS 239
+ + H + LN V D K+T+ A H G+++ HF + DG + TGD++
Sbjct: 297 MIREALKHTITLNYGDVTDIAPDTKLTMHNAGHILGSSIAHFHIGDGLYNVAFTGDYKFE 356
Query: 240 RLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
R P + N R+ L + TY PS+++ ++++ K + + K VV+
Sbjct: 357 RTRLFDPAVCNFPRLETLVTEATYGGTNSIQPSRKEAEVNLIKVVKETINRGGK--VVIP 414
Query: 299 AYSIGK-ESVFLAISKALGVKI 319
A+S+G+ + V + + +A+ K+
Sbjct: 415 AFSVGRSQEVMVVLEEAIRKKV 436
>gi|333988300|ref|YP_004520907.1| KH-domain/beta-lactamase-domain-containing protein
[Methanobacterium sp. SWAN-1]
gi|333826444|gb|AEG19106.1| KH-domain/beta-lactamase-domain protein [Methanobacterium sp.
SWAN-1]
Length = 634
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 27/191 (14%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLLVNPSYIH----PLELNTE 198
A ++H H DH G L + +G P+YC+ T L+ + L + H PL N +
Sbjct: 236 AVVISHAHLDHSGFLPYLYHYGYEGPVYCTTPTRDLMTLLQLDHIDIAHREDKPLPFNIK 295
Query: 199 HVIDGVK------------------VTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFRAS 239
HV +K +TL A H G+A+ H + DGQ +++TGDF+
Sbjct: 296 HVKKSIKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAITHMHIGDGQHNFVYTGDFKFE 355
Query: 240 RLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
R P + R+ + +++TY + P++ D +++ L++ K L+ V
Sbjct: 356 RSRLLEPAVAKFPRIESMVMESTYGGHEDVQPTRNDAEKELIKTIYQTLQRGGKVLIPVF 415
Query: 299 AYSIGKESVFL 309
A +E + +
Sbjct: 416 AVGRAQEIMIV 426
>gi|119189777|ref|XP_001245495.1| hypothetical protein CIMG_04936 [Coccidioides immitis RS]
Length = 704
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 21/160 (13%)
Query: 192 PLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----RLMQS 244
PL + TE + ++VTL ANHCPGA + +G+ L+TGD RA +
Sbjct: 26 PLHVPTEIELTPGSTIRVTLFNANHCPGAVMFLIE-GNGKAILYTGDVRAEPWWVESLIR 84
Query: 245 YPLLVNH-----RVNVLYLDTTYC---NPKYKFPSKEDVLNYVVRLTKNCLKKQPK-TLV 295
P+L+ + R++ +YLDTT+ + FPSK + + ++ + +K P+ T+
Sbjct: 85 NPILIPYTLGDCRLDRIYLDTTFAIKSDIYSAFPSKAEGIKELL----HKVKAYPEDTIF 140
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWP 335
++ G E V++A+S AL KI+ + + ++ QS P
Sbjct: 141 YFRNWTFGYEDVWIALSAALNTKIHVDQYQLKLYQSLALP 180
>gi|229581495|ref|YP_002839894.1| hypothetical protein YN1551_0850 [Sulfolobus islandicus Y.N.15.51]
gi|228012211|gb|ACP47972.1| conserved hypothetical protein [Sulfolobus islandicus Y.N.15.51]
Length = 328
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 122/289 (42%), Gaps = 38/289 (13%)
Query: 149 LTHFHYDHYGGLGKRWSH-GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+THFH DH GL K S I +P+T ++++ + P L + + D +
Sbjct: 32 VTHFHADHIMGLEKSISICDSIIATPITLDILKLDYAIPPRKAFGLNYDIKMTFDDETIV 91
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
L +++H G+A + L++G +TGDF+ + P+L ++L ++ TY P +
Sbjct: 92 LKKSDHVIGSAQVLITLKNGLEIGYTGDFKNPD--KGTPIL---HPDILIIEATYGKPDF 146
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTL---------VVVGAYSIGKESVFLAISKALGVK 318
+ P K+DV + ++ L P + +++ +G ++ F+ K +
Sbjct: 147 RRPFKDDVESLFADYVRDALMNSPVRIYGYHGKLQEIMLSLRKMGIDAPFIVGGKISKMT 206
Query: 319 IYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVL 378
A + Q FD + + + + F ++ + G + +L
Sbjct: 207 NIAIKYGYNISQVFDESQSEAREIMRDD---------WYISFSHYNEFKRRNGKYFNFLL 257
Query: 379 AFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+GW + D+++ + + Y V +S+H+ F +L +V+
Sbjct: 258 ----SGWEFK-------DVVKKIDEKS---YAVSFSDHADFDDLIYYVE 292
>gi|408382616|ref|ZP_11180159.1| KH-domain/beta-lactamase-domain-containing protein
[Methanobacterium formicicum DSM 3637]
gi|407814692|gb|EKF85316.1| KH-domain/beta-lactamase-domain-containing protein
[Methanobacterium formicicum DSM 3637]
Length = 634
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 29/193 (15%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLLVNPSYIH----PLELNTE 198
A ++H H DH G L + +G P+YC+ T L+ + L + H PL N +
Sbjct: 236 AVIISHAHLDHSGFLPYLFHYGYEGPVYCTTPTRDLMTLLQLDHIDIAHREDSPLPFNVK 295
Query: 199 HVIDGVK------------------VTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFRAS 239
HV +K +TL A H G+A+ H + DGQ +++TGDF+
Sbjct: 296 HVKKSIKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAITHMHIGDGQHNFVYTGDFKYE 355
Query: 240 RLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
R P + R+ + +++TY + P++ D +++ + L+++ K L+ V
Sbjct: 356 RSRLLEPAVSKFPRIESMVMESTYGGHEDVQPTRNDAEKELIKTIYHTLERKGKILIPV- 414
Query: 299 AYSIGKESVFLAI 311
+++G+ + +
Sbjct: 415 -FAVGRAQELMIV 426
>gi|170289661|ref|YP_001736477.1| RNA processing exonuclease [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170173741|gb|ACB06794.1| Predicted exonuclease of the beta-lactamase fold involved in RNA
processing [Candidatus Korarchaeum cryptofilum OPF8]
Length = 424
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 144 CSAYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLL---------------- 184
A LTH H DH G L + SHG PIY +T + L
Sbjct: 54 VDAVLLTHAHLDHSGALPRLVSHGMEVPIYALDITKYYTELLLYDSIKVAKLKGHNLGYG 113
Query: 185 ---VNPSY--IHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA- 238
VN + ++ N + ++VT ++A H PG+A+ H DG L+TGDF
Sbjct: 114 ARDVNKTLENFRTIDFNIPFKVGDLEVTAIDAGHIPGSAMFHISY-DGTSLLYTGDFNTV 172
Query: 239 -SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
SRLM + +V++L +TTY ++ K+++L
Sbjct: 173 ESRLMPPARIEDVPKVDILITETTYAKKEHPPRDKQEIL 211
>gi|448099778|ref|XP_004199220.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
gi|359380642|emb|CCE82883.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
Length = 714
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 122 FYKKIPGTP-FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV- 179
F+ KI P VD F Y LTH H DH GL KR G +YCS +T L+
Sbjct: 3 FHGKIHEIPNVLVDNF----TDEAELYLLTHSHTDHLLGLRKRSFDGLVYCSYITKELIE 58
Query: 180 --RMCLLVNPSYIHPLELNTEHVID----GVKVTLLEANHCPGAALIHFRLQDGQ-CYLH 232
R C + P++ N + I + VT++ + HCPG+++ F L+D + L
Sbjct: 59 IKRPCFA--SKNLIPIQYNRCYDISLSTGCLYVTMISSYHCPGSSM--FLLEDSRHRVLI 114
Query: 233 TGDFRAS----RLMQSYPLLVNH-----RVNVLYLDTTYC---NPKYKFPSKEDVLNYVV 280
TGD R ++S L + R++ +YLDTT+ P PS D +N +V
Sbjct: 115 TGDIRGEDWWLEELKSNTFLRPYISGALRLDNIYLDTTFSYRGEPYIDIPSNYDGINLLV 174
Query: 281 RLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIY 320
++ P G E V+ I+K G I+
Sbjct: 175 EQLRSYPLDDPDIQFYFLDSVTGLEEVWAYIAKEFGGSIH 214
>gi|389740175|gb|EIM81366.1| hypothetical protein STEHIDRAFT_171755 [Stereum hirsutum FP-91666
SS1]
Length = 981
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 97/253 (38%), Gaps = 75/253 (29%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCS-----------PLTARLVR--------------M 181
+ LTH H DH GL + ++CS P R ++
Sbjct: 36 HLLTHTHSDHLTGLAAKSFASKVWCSHDAKEMLLRLEPYKERKLKDSDIREDKKLAKAYQ 95
Query: 182 CLLVNPSYI-------------HPLELNTEHVID-----GVKVTLLEANHCPGAALIHFR 223
L V+P + H + LNT D V +TLL+ANHCPGA +
Sbjct: 96 HLKVSPQVVDGRKDYHGSRDLLHAVPLNTPISYDMSGLATVNITLLDANHCPGAVMYLVE 155
Query: 224 LQDGQCYLHTGDFRASRL----------MQSYPLLVNH------------------RVNV 255
+G LHTGDFRA ++SY L H ++
Sbjct: 156 GSEGNI-LHTGDFRAEPRFLNSIAKNPHLRSYLSLPEHVDDLSGASRSGRVTRKGATLDA 214
Query: 256 LYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKAL 315
+YLDT + PSK + N ++ L K T + +++ G E + +AI+ A
Sbjct: 215 IYLDTACVWSNIQQPSKAEATNGLISLMKLY---GATTTFFINSWTWGYEDILIAIAMAF 271
Query: 316 GVKIYANASRRRV 328
+I+A+ +R +
Sbjct: 272 DTRIHADRYKREI 284
>gi|325958080|ref|YP_004289546.1| KH-domain/beta-lactamase-domain-containing protein
[Methanobacterium sp. AL-21]
gi|325329512|gb|ADZ08574.1| KH-domain/beta-lactamase-domain protein [Methanobacterium sp.
AL-21]
Length = 634
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 29/193 (15%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLLVNPSYIH----PLELNTE 198
A ++H H DH G L + +G P+YC+ T L+ + L + H PL N +
Sbjct: 236 AVIISHAHLDHSGFLPYLYHYGYEGPVYCTTPTRDLMTLLQLDHIDIAHREDNPLPFNIK 295
Query: 199 HVIDGVK------------------VTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFRAS 239
HV +K +TL A H G+A+ H + DGQ +++TGDF+
Sbjct: 296 HVKKSIKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAITHMHIGDGQHNFVYTGDFKYE 355
Query: 240 RLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
R P + R+ L +++TY PS+ D +V+ L++ K L+ V
Sbjct: 356 RSRLLEPAVSKFPRIESLVMESTYGGHDDVQPSRNDAEKELVKTIYRTLERGGKVLMPV- 414
Query: 299 AYSIGKESVFLAI 311
+++G+ + +
Sbjct: 415 -FAVGRAQELMIV 426
>gi|70943836|ref|XP_741916.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520599|emb|CAH81158.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 540
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 22/151 (14%)
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKI-YANASRRRVLQSFDWPELSGNLCTQGN 346
+K+ KTL + G Y++GKE V+L++S+A +KI + N ++ + S+ + N T
Sbjct: 298 RKRKKTLFMFGTYNLGKEKVYLSVSEACNMKIHFRNPKKKTIFNSYICNKDMLNRITDNK 357
Query: 347 -DTLLHVLPMS---------SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLD 396
+ +H++ ++ K +L D +++ + PTGW +
Sbjct: 358 LEAEIHIVDINYSYIFPKIEKNKLRSLID--SEMEDEFDSFYYIMPTGWVKNYYF----- 410
Query: 397 LIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ N++++ +PYSEHS+ ELR+FV+
Sbjct: 411 ----YEKNNMSVFLIPYSEHSNLDELRDFVK 437
>gi|189197579|ref|XP_001935127.1| hypothetical protein PTRG_04794 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187981075|gb|EDU47701.1| hypothetical protein PTRG_04794 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 609
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 19/156 (12%)
Query: 192 PLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA-----SRLMQ 243
PL+ TE + + ++VTL++ANHC GA + + G+ L+TGD RA + L+Q
Sbjct: 27 PLDTPTEIELAPGNTIRVTLIDANHCVGAVMFLIEGK-GEIVLYTGDIRAETWWVNSLVQ 85
Query: 244 SYPLLV----NHRVNVLYLDTTYCN---PKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
+ LL N R++ +YLDTT+ P +FPSK + + L + T+
Sbjct: 86 NPVLLPYTLGNLRLDCVYLDTTFATKKMPYREFPSKAEGIR---ELLSKVDEYPDDTIFY 142
Query: 297 VGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
+++ G E++++A+S LG +I+ + R R+ S
Sbjct: 143 FHSWTFGYENIWVALSTYLGSRIHLDDYRARIYGSL 178
>gi|312136618|ref|YP_004003955.1| kh-domain/beta-lactamase-domain-containing protein [Methanothermus
fervidus DSM 2088]
gi|311224337|gb|ADP77193.1| KH-domain/beta-lactamase-domain protein [Methanothermus fervidus
DSM 2088]
Length = 650
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 144 CSAYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLL---------------- 184
A ++H H DH G + + +G P+YCS T L+ + L
Sbjct: 250 IEAVVISHAHLDHSGFVPYLYHYGYRGPVYCSAPTRDLMALLQLDHIDIAEREGRELPFN 309
Query: 185 ---VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYL-HTGDFR 237
VN H + L V D +++TL A H G+A++H + DGQ L +TGDF+
Sbjct: 310 AKDVNKCLKHTITLEYGEVTDITPDIRLTLHNAGHILGSAILHLHIGDGQHNLVYTGDFK 369
Query: 238 ASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
+ P + + R+ L +++TY + PS+E ++++ + +K+ K L+
Sbjct: 370 YEKTRLLEPAVTDFPRLETLVMESTYGGKEDIQPSREMAEKRLIKVIYDTIKRGGKVLIP 429
Query: 297 VGAYSIGKESVFLAI 311
V +++G+ + +
Sbjct: 430 V--FAVGRAQELMVV 442
>gi|227828208|ref|YP_002829988.1| hypothetical protein M1425_1946 [Sulfolobus islandicus M.14.25]
gi|229579845|ref|YP_002838244.1| hypothetical protein YG5714_2068 [Sulfolobus islandicus Y.G.57.14]
gi|229585437|ref|YP_002843939.1| hypothetical protein M1627_2024 [Sulfolobus islandicus M.16.27]
gi|238620399|ref|YP_002915225.1| hypothetical protein M164_1954 [Sulfolobus islandicus M.16.4]
gi|284998455|ref|YP_003420223.1| hypothetical protein [Sulfolobus islandicus L.D.8.5]
gi|385776527|ref|YP_005649095.1| exonuclease, beta-lactamase fold, RNA processing-like protein
[Sulfolobus islandicus REY15A]
gi|227460004|gb|ACP38690.1| conserved hypothetical protein [Sulfolobus islandicus M.14.25]
gi|228010560|gb|ACP46322.1| conserved hypothetical protein [Sulfolobus islandicus Y.G.57.14]
gi|228020487|gb|ACP55894.1| conserved hypothetical protein [Sulfolobus islandicus M.16.27]
gi|238381469|gb|ACR42557.1| conserved hypothetical protein [Sulfolobus islandicus M.16.4]
gi|284446351|gb|ADB87853.1| conserved hypothetical protein [Sulfolobus islandicus L.D.8.5]
gi|323475275|gb|ADX85881.1| exonuclease, beta-lactamase fold, RNA processing-like protein
[Sulfolobus islandicus REY15A]
Length = 328
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 121/289 (41%), Gaps = 38/289 (13%)
Query: 149 LTHFHYDHYGGLGKRWSH-GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+THFH DH GL K S I +P+T ++ + + P L + + D +
Sbjct: 32 VTHFHADHIMGLEKSISICDSIIATPITLDILNLDYAIPPRKAFGLNYDIKMTFDDETIV 91
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
L +++H G+A + L++G +TGDF+ + P+L ++L ++ TY P +
Sbjct: 92 LKKSDHVIGSAQVLITLKNGLEIGYTGDFKNPD--KGTPIL---HPDILIIEATYGKPDF 146
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTL---------VVVGAYSIGKESVFLAISKALGVK 318
+ P K+DV + ++ L P + +++ +G ++ F+ K +
Sbjct: 147 RRPFKDDVESLFADYVRDALMNSPVRIYGYHGKLQEIMLSLRKMGIDAPFIVGGKISKMT 206
Query: 319 IYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVL 378
A + Q FD + + + + F ++ + G + +L
Sbjct: 207 NIAIKYGYNISQVFDESQSEAREIMRDD---------WYISFSHYNEFKRRNGKYFNFLL 257
Query: 379 AFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+GW + D+++ + + Y V +S+H+ F +L +V+
Sbjct: 258 ----SGWEFK-------DVVKKIDEKS---YAVSFSDHADFDDLIYYVE 292
>gi|68061819|ref|XP_672911.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490363|emb|CAI01693.1| conserved hypothetical protein [Plasmodium berghei]
Length = 322
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIY-ANASRRRVLQSFDWPELSGNLCTQGN 346
+K+ KTL + G Y++GKE V+L++S+A +KIY N ++ + S+ + + N T GN
Sbjct: 143 RKRKKTLFMFGTYNLGKEKVYLSVSEACNMKIYFRNPKKKIIFNSYIYNKDMLNRIT-GN 201
Query: 347 --DTLLHVLPMS---------SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQL 395
+ +H++ ++ K +L D +++ + PTGW +
Sbjct: 202 KLEAEIHIVDINYSYIFPKIEKNKLRSLID--AEMEDEFDSFYYIIPTGWVKNYYF---- 255
Query: 396 DLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ N++++ +PYSEHS+ EL++FV+
Sbjct: 256 -----YEKNNMSVFLIPYSEHSNLDELKDFVK 282
>gi|227830967|ref|YP_002832747.1| hypothetical protein LS215_2109 [Sulfolobus islandicus L.S.2.15]
gi|227457415|gb|ACP36102.1| conserved hypothetical protein [Sulfolobus islandicus L.S.2.15]
Length = 328
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 121/289 (41%), Gaps = 38/289 (13%)
Query: 149 LTHFHYDHYGGLGKRWSH-GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+THFH DH GL K S I +P+T ++ + + P L + + D +
Sbjct: 32 VTHFHADHIMGLEKSISLCDSIIATPITLDILNLDYAIPPRKAFGLNYDIKMTFDDETIV 91
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
L +++H G+A + L++G +TGDF+ + P+L ++L ++ TY P +
Sbjct: 92 LKKSDHVIGSAQVLITLKNGLEIGYTGDFKNPD--KGTPIL---HPDILIIEATYGKPDF 146
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTL---------VVVGAYSIGKESVFLAISKALGVK 318
+ P K+DV + ++ L P + +++ +G ++ F+ K +
Sbjct: 147 RRPFKDDVESLFADYVRDALMNSPVRIYGYHGKLQEIMLSLRKMGIDAPFIVGGKISKMT 206
Query: 319 IYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVL 378
A + Q FD + + + + F ++ + G + +L
Sbjct: 207 NIAIKYGYNISQVFDESQSEAREIMRDD---------WYISFSHYNEFKRRNGKYFNFLL 257
Query: 379 AFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+GW + D+++ + + Y V +S+H+ F +L +V+
Sbjct: 258 ----SGWEFK-------DVVKKIDEKS---YAVSFSDHADFDDLIYYVE 292
>gi|385773885|ref|YP_005646452.1| exonuclease, beta-lactamase fold, RNA processing [Sulfolobus
islandicus HVE10/4]
gi|323478000|gb|ADX83238.1| exonuclease, beta-lactamase fold, RNA processing [Sulfolobus
islandicus HVE10/4]
Length = 321
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 121/289 (41%), Gaps = 38/289 (13%)
Query: 149 LTHFHYDHYGGLGKRWSH-GPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+THFH DH GL K S I +P+T ++ + + P L + + D +
Sbjct: 32 VTHFHADHIMGLEKSISICDSIIATPITLDILNLDYAIPPRKAFGLNYDIKMTFDDETIV 91
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
L +++H G+A + L++G +TGDF+ + P+L ++L ++ TY P +
Sbjct: 92 LKKSDHVIGSAQVLITLKNGLEIGYTGDFKNPD--KGTPIL---HPDILIIEATYGKPDF 146
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTL---------VVVGAYSIGKESVFLAISKALGVK 318
+ P K+DV + ++ L P + +++ +G ++ F+ K +
Sbjct: 147 RRPFKDDVESLFADYVRDALMNSPVRIYGYHGKLQEIMLSLRKMGIDAPFIVGGKISKMT 206
Query: 319 IYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVL 378
A + Q FD + + + + F ++ + G + +L
Sbjct: 207 NIAIKYGYNISQVFDESQSEAREIMRDD---------WYISFSHYNEFKRRNGKYFNFLL 257
Query: 379 AFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+GW + D+++ + + Y V +S+H+ F +L +V+
Sbjct: 258 ----SGWEFK-------DVVKKIDEKS---YAVSFSDHADFDDLIYYVE 292
>gi|167376679|ref|XP_001734097.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165904551|gb|EDR29766.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 202
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 30/140 (21%)
Query: 292 KTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLH 351
KTL +V Y+IGKE I++ G+KI+ + ++ +++ LC + D L+
Sbjct: 3 KTLFIVQTYTIGKEMFVEEIARQTGMKIHVDENKYSIVK----------LCKR--DLSLY 50
Query: 352 VLPMSSLKFET---------LKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLS 402
L SSL+ T L L N+Y ++ F+PTGW T ++
Sbjct: 51 TLEESSLEIRTSISNISISSLTVELSQLPNKYDKIIIFQPTGWAKKTTCKGSFEVKE--- 107
Query: 403 RGNITIYGVPYSEHSSFTEL 422
Y +PYSEHSSF EL
Sbjct: 108 ------YKMPYSEHSSFNEL 121
>gi|310823805|ref|YP_003956163.1| hypothetical protein STAUR_6579 [Stigmatella aurantiaca DW4/3-1]
gi|309396877|gb|ADO74336.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 336
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--RMCLLV 185
GTP +DA R + F++H H DH H + T R + R+ +
Sbjct: 26 GTPLALDAMRKTPLS-----FVSHGHSDHIA------RHERTIATAATLRFMAHRLGPVK 74
Query: 186 NP---SYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLM 242
+P +Y P EL + + +L A H G+A + DG+ ++TGD + +
Sbjct: 75 DPMAVAYNQPFELGP------LTLEVLSAGHILGSAQLRVVRGDGRRIVYTGDLNVTPSL 128
Query: 243 QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302
+ P+ V + L ++ T+ +P+Y+FP K++VL V + L++ + V+ Y +
Sbjct: 129 TAEPVQVAE-CDTLVIEATFGHPRYRFPPKDEVLGAVETWVRQQLER--GAVPVLLGYPL 185
Query: 303 GKESVFLAISKALGVKIYANASRRRVLQSF 332
GK + G + A+ S V Q +
Sbjct: 186 GKSQEAMKYLSGRGFPLVAHPSIFEVTQLY 215
>gi|156404099|ref|XP_001640245.1| predicted protein [Nematostella vectensis]
gi|156227378|gb|EDO48182.1| predicted protein [Nematostella vectensis]
Length = 305
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 115/277 (41%), Gaps = 43/277 (15%)
Query: 146 AYFLTHFHYDHYGGLGK-------RWSHGPIYCSPLTARLVRMCLLVNPSYIH------- 191
AYFL+H H DH GL + I+CS T L LL + S+ H
Sbjct: 28 AYFLSHCHRDHMQGLDSATFSDAIKSKKQRIFCSETTRNL----LLCDASFSHLEEYLTG 83
Query: 192 -PL-----------ELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
PL E N E VI VTL A HC G+ + F G L+TGDFR +
Sbjct: 84 IPLDQPFVVTPYDKETNKEEVI---TVTLFSAGHCVGSVMFLFEGLKGNV-LYTGDFRLA 139
Query: 240 R--LMQSYPLLVNHRVN---VLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+ L N RV +Y+DTT+C PK PS+++ + + ++ + +
Sbjct: 140 TGDTKRITVLHCNGRVKDIRSVYIDTTFCLPKMMSIPSRKETNDAIFKVIDRWFSQGAEH 199
Query: 294 LVVVGAYS-IGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
+V + S G E + +I+ +KI+ + R + + ++ + T + T +H
Sbjct: 200 VVSLQCKSKYGYEYMLKSIAIYYKIKIHVSDERLEMYRYLS--DMIQHFTTDASKTRIHA 257
Query: 353 LPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSE 389
+ TL L VL RP+ + +++
Sbjct: 258 CHWKNSDSSTLPCGLVLPNGLEPKVLRIRPSTFWFAQ 294
>gi|115372641|ref|ZP_01459948.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|115370362|gb|EAU69290.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
Length = 324
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--RMCLLV 185
GTP +DA R + F++H H DH H + T R + R+ +
Sbjct: 14 GTPLALDAMRKTPLS-----FVSHGHSDHIA------RHERTIATAATLRFMAHRLGPVK 62
Query: 186 NP---SYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLM 242
+P +Y P EL + + +L A H G+A + DG+ ++TGD + +
Sbjct: 63 DPMAVAYNQPFELGP------LTLEVLSAGHILGSAQLRVVRGDGRRIVYTGDLNVTPSL 116
Query: 243 QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302
+ P+ V + L ++ T+ +P+Y+FP K++VL V + L++ + V+ Y +
Sbjct: 117 TAEPVQVAE-CDTLVIEATFGHPRYRFPPKDEVLGAVETWVRQQLER--GAVPVLLGYPL 173
Query: 303 GKESVFLAISKALGVKIYANASRRRVLQSF 332
GK + G + A+ S V Q +
Sbjct: 174 GKSQEAMKYLSGRGFPLVAHPSIFEVTQLY 203
>gi|390937932|ref|YP_006401670.1| exonuclease of the beta-lactamase fold involved in RNA
processing-like protein [Desulfurococcus fermentans DSM
16532]
gi|390191039|gb|AFL66095.1| exonuclease of the beta-lactamase fold involved in RNA
processing-like protein [Desulfurococcus fermentans DSM
16532]
Length = 362
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 132/297 (44%), Gaps = 45/297 (15%)
Query: 149 LTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCLLVN----PSY---IHPLELNTEHV 200
+TH H DH GGL + + I + +T L+ V+ P Y PL+ N V
Sbjct: 41 ITHAHVDHLGGLEESIKYSKMIIATSITLDLIESLNYVDKYLLPYYRLKKKPLKYNECLV 100
Query: 201 IDGVK-VTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLD 259
ID + + L +A+H PGAA ++ ++ + +TGDF+ Q V ++VL ++
Sbjct: 101 IDDNETLCLFQASHIPGAAQVYVEYRELRLG-YTGDFKLDGKTQ-----VMKDLDVLVME 154
Query: 260 TTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGV-- 317
+TY NP Y+ P K++V L + L + K + V G + +E++ + K +
Sbjct: 155 STYGNPNYRRPFKDEVPELFASLVEEGLYRY-KRVYVYGYHGKVQEAMIILREKGIEAPF 213
Query: 318 ----KIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS---LKFETLKDYLKPY 370
KIY + RVL+ GN + D L + P K + +Y +
Sbjct: 214 ILPPKIYHST---RVLEKHGIK--IGNYMHE-EDMLRGLNPGEKAVIFKHMNVAEYRRLD 267
Query: 371 GNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
G+ VL +GW ++ +P R + Y V S+H+ F +L E+V+
Sbjct: 268 GSALHIVL----SGWEFN----------KPFRRIDDYTYLVALSDHADFDDLVEYVR 310
>gi|336365546|gb|EGN93896.1| hypothetical protein SERLA73DRAFT_78273 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378103|gb|EGO19262.1| hypothetical protein SERLADRAFT_443308 [Serpula lacrymans var.
lacrymans S7.9]
Length = 950
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 108/270 (40%), Gaps = 43/270 (15%)
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ-DGQCYLHTGDFRA--------SR-- 240
P ELN ++ V +TL++ANHCPGA + F +Q D LHTGDFRA SR
Sbjct: 127 PFELN---ALETVTITLIDANHCPGAVM--FLIQGDKGAILHTGDFRAEPWFLDTLSRNP 181
Query: 241 LMQSYPLLVN-------------HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL 287
+Q Y N + ++LDT K P+KE + ++ L
Sbjct: 182 FLQPYIPAENVPAVAEAEGPITYQPLEAIHLDTASLLSTLKVPTKEQAVTGLIELIALF- 240
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND 347
P T + +++ G E + AI+ KI+ + + + P L +
Sbjct: 241 --PPTTYFFINSWTWGYEDILKAIANTFHCKIHVDRYKHSIYSHVSDPFLRSIFTCDPSS 298
Query: 348 TLLHVLP-MSSLKFETLKDYLKPYGNQYAA-------VLAFRPTGWTYSETVGNQLDLIR 399
T H +++DY YGN+ A V+ P + S+ + R
Sbjct: 299 TRFHACERFDRCDIVSVEDYN--YGNEPAPLSKVGKKVVYVNPIPMSESKWEMYLTSVKR 356
Query: 400 PLSRG-NITIYGVPYSEHSSFTELREFVQV 428
++ G N+ V S HS EL FV +
Sbjct: 357 QMNDGENVDSLLVALSRHSPLPELMSFVSL 386
>gi|357464661|ref|XP_003602612.1| DNA cross-link repair 1B protein [Medicago truncatula]
gi|355491660|gb|AES72863.1| DNA cross-link repair 1B protein [Medicago truncatula]
Length = 571
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 48/239 (20%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTAR-LVRMCLLVN 186
G PF+VD + S +F+TH H DH + S PIY + LT L++ ++
Sbjct: 8 GLPFSVDTWTPSSKISKRHHFITHAHKDHSSNITSH-SSFPIYSTSLTKTLLLQHHPQLD 66
Query: 187 PSYIHPLELNTEHVID----GVKVTLLEANHCPG-------------------------A 217
S +E+ ++D VT +ANHCPG A
Sbjct: 67 ASLFLVIEVGQSLIVDDPDGNFTVTAFDANHCPGNFFLSNSYNQFLHLYFHSTMDDFEWA 126
Query: 218 ALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNH----------RVNVLYLDTTYCNPKY 267
+ F + G LHTGD R + L + L V + ++ ++LD T+ +
Sbjct: 127 VMFLFEGKFGN-ILHTGDCRLT-LECLFNLPVKYVGTKGKKPRCPLDCVFLDCTFGDFAR 184
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQP-KTLVVVGAYSIGKESVFLAISKALGVKIYANASR 325
P+K + VV NC+ K P + V + +G+E + + +S+ G KIY + ++
Sbjct: 185 AMPTKHSSIQQVV----NCIWKHPDASTVYLTCDILGQEDILVQVSQTFGAKIYVDKAQ 239
>gi|157876139|ref|XP_001686430.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129504|emb|CAJ08047.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 664
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 81/212 (38%), Gaps = 69/212 (32%)
Query: 173 PLTARLVRMCLLVNPSYIHPLELNTEHVIDGV-KVTLLEANHCPGAALIHFRLQDGQCYL 231
P T R+ L++P E DG+ V L+ ANHCPGA + F L
Sbjct: 21 PETPHHPRVQALLSPPAASSKGQAQEKAGDGMFVVRLIPANHCPGAVMFLFVSPVFGTVL 80
Query: 232 HTGDFR-------------ASRLMQSY----PLLVNHR---------------------- 252
HTGDFR +S Q+Y P L+
Sbjct: 81 HTGDFRFNGSRETWEQFVRSSNRRQTYVPPSPCLIKREEEQHASTAAPPAPVYEQFIADD 140
Query: 253 -----------VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKN------CLKKQP---- 291
++VL LD T+C P Y+FPS+ +V V+ + ++ C + P
Sbjct: 141 EALRDVAQRQLLDVLLLDNTFCAPAYRFPSQWEVTQRVIEVLRSLFHRAACRARVPAPSA 200
Query: 292 --------KTLVVVGAYSIGKESVFLAISKAL 315
+ V++G Y+IGKE V LA+ A
Sbjct: 201 GHPQHRQVRCAVLIGCYTIGKERVALALRDAF 232
>gi|405355754|ref|ZP_11024866.1| mRNA 3-end processing factor [Chondromyces apiculatus DSM 436]
gi|397091026|gb|EJJ21853.1| mRNA 3-end processing factor [Myxococcus sp. (contaminant ex DSM
436)]
Length = 316
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--RMCLLV 185
GTP ++DA R + C F++H H DH H + T R + R+ +
Sbjct: 5 GTPLSLDAKRKSPL--C---FVSHGHSDHIA------RHESTIATAATLRFMAHRLGPVR 53
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSY 245
P + NT + +++ LL A H G+A + DG+ ++TGD + + +
Sbjct: 54 EPREV---PFNTPFELGALRLELLPAGHILGSAQLRVTRPDGRRIVYTGDLNVAPSLTAE 110
Query: 246 PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKE 305
+V + L +++T+ +P+Y+FP + +VL V + L++ + V+ Y +GK
Sbjct: 111 ATVVAE-CDTLVIESTFGHPRYRFPPRAEVLGQVEAWLRMQLER--GAVPVLLGYPLGKS 167
Query: 306 SVFLAISKALGVKIYANASRRRVLQSF 332
+ G + A+AS V Q +
Sbjct: 168 QEAMKHLAGRGFSLVAHASIFEVAQLY 194
>gi|444911529|ref|ZP_21231704.1| mRNA 3-end processing factor [Cystobacter fuscus DSM 2262]
gi|444718287|gb|ELW59103.1| mRNA 3-end processing factor [Cystobacter fuscus DSM 2262]
Length = 325
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--RMC 182
++ GTP +DA R + F++H H DH H + T R + R+
Sbjct: 11 QLAGTPLFLDATRKTPLS-----FVSHAHADHIA------RHERTIATAATLRFMAHRLG 59
Query: 183 LLVNP---SYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ P Y P +L + + LL A H G+A + +DG+ + TGD
Sbjct: 60 KVAAPLPAPYGRPFDLGP------LSLELLPAGHVLGSAQLRIIREDGKRIVFTGDLNLE 113
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
+ + P V ++L +++T+ +P+Y FP +E+VL V + L++ + V+
Sbjct: 114 PSLTAEPAQVAE-CDLLIIESTFGHPRYAFPPREEVLGQVESWVRRHLER--GAVPVLLG 170
Query: 300 YSIGKESVFLAISKALGVKIYANAS 324
YS+GK + G + A+ S
Sbjct: 171 YSLGKSQEAMKYLSGRGFSLVAHES 195
>gi|223938585|ref|ZP_03630476.1| DNA ligase I, ATP-dependent Dnl1 [bacterium Ellin514]
gi|223892704|gb|EEF59174.1| DNA ligase I, ATP-dependent Dnl1 [bacterium Ellin514]
Length = 927
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 141 IKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNT--- 197
I F++H H DH H + S T++ + + H L+
Sbjct: 28 ITTAETVFISHAHSDHTA------PHREVILSEPTSKFM-FARIGGTRQEHILKFGQPAT 80
Query: 198 -EHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVL 256
E+ G ++TL+ A H G+A+ +GQ L+TGDF+ R +S L ++L
Sbjct: 81 YEYNGTGYQITLVPAGHIFGSAM-SLVEAEGQSLLYTGDFKL-RPSRSAELCEPRPADIL 138
Query: 257 YLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG 316
++TT+ P Y+FP ++V+ V+R + + +T V+ G YS+GK L G
Sbjct: 139 IMETTFGRPSYQFPPTDEVMQGVIRFCQQAIDND-ETPVLYG-YSLGKSQELLRSLGQAG 196
Query: 317 VKIYANASRRRVLQSF 332
+ I +A+ ++ + +
Sbjct: 197 LPIMLHAAVHKLTEIY 212
>gi|308198432|pdb|2XR1|A Chain A, Dimeric Archaeal Cleavage And Polyadenylation Specificity
Factor With N-Terminal Kh Domains (Kh-Cpsf) From
Methanosarcina Mazei
gi|308198433|pdb|2XR1|B Chain B, Dimeric Archaeal Cleavage And Polyadenylation Specificity
Factor With N-Terminal Kh Domains (Kh-Cpsf) From
Methanosarcina Mazei
Length = 640
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 146 AYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------------ 184
A +TH H DH G L K GP+YC+P T L+ + L
Sbjct: 240 AVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESG 299
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFRAS 239
V + H + L+ E V D +K+T A H G+A+ HF + DG + TGD++
Sbjct: 300 MVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIGDGLHNVVFTGDYKYE 359
Query: 240 RLMQSYPLLVNH--RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ P VN RV + + TY N P+ +D ++ + KN +++ + V+
Sbjct: 360 KTRLFDP-AVNKFPRVETVISEATYGNANAFQPALKDAEKHLQMVVKNTIER--GGIAVI 416
Query: 298 GAYSIGK-ESVFLAISKAL 315
A+++G+ + V + + +++
Sbjct: 417 PAFAVGRSQEVMIVLEESI 435
>gi|154336657|ref|XP_001564564.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061599|emb|CAM38630.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 657
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 74/192 (38%), Gaps = 75/192 (39%)
Query: 202 DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF-------------RASRLMQSY--- 245
D V L+ ANHCPGA + F LHTGDF R+S ++Y
Sbjct: 51 DVFAVRLIPANHCPGAVMFLFVSSFFGTVLHTGDFRFSGLRETWQNPPRSSNWGKTYVPP 110
Query: 246 -PLLVNHR---------------------------------------VNVLYLDTTYCNP 265
P L+ ++VL+LD T+C+P
Sbjct: 111 LPCLIQRSKEQHALTAAVPEVVAPSAPLYEQFIADDEALQDVARRQLLDVLFLDNTFCSP 170
Query: 266 KYKFPSKEDVLNYVVR------------------LTKNCLKKQPKTLVVVGAYSIGKESV 307
YKFPS+ V V+ LT + ++Q + V++G Y+IGKE V
Sbjct: 171 AYKFPSQWKVTQTVIEVLLSLFHRAACCARAAVPLTGHPPRRQVRCAVLIGCYTIGKERV 230
Query: 308 FLAISKAL-GVK 318
LA+ A GV+
Sbjct: 231 ALALRDAFPGVR 242
>gi|288931234|ref|YP_003435294.1| RNA-metabolising metallo-beta-lactamase [Ferroglobus placidus DSM
10642]
gi|288893482|gb|ADC65019.1| RNA-metabolising metallo-beta-lactamase [Ferroglobus placidus DSM
10642]
Length = 407
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 37/243 (15%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCL------LVNPSY----IHPLE 194
+ L+H H DH G + P +Y +P T+ L + L + NP Y + E
Sbjct: 46 SLILSHGHLDHVGVAPNLMDYDPLVYMTPPTSDLSSILLKDSLNIMENPPYTKRQLRQFE 105
Query: 195 LNTEHV-------IDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA--SRLMQ-- 243
NT + IDG ++TL A H PG+A I+ ++ L+TGD R +RL++
Sbjct: 106 SNTRFIGYDEPFHIDGWEITLFNAGHIPGSASIY--MERDVSILYTGDIRLEDTRLLEGA 163
Query: 244 --SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYS 301
SYP ++VL +++TY ++ P + ++ V K L ++ A++
Sbjct: 164 DTSYP-----EIDVLIVESTYFGVEH--PDRRELEKAFVESVKETLDNG--GFAIIPAFA 214
Query: 302 IGKESVFLAISKALGVKIYANASRRRVLQSFD-WPELSGNLCTQGNDTLLHVLPMSSLKF 360
+G+ I G+ Y + V + + +PE + + T+ V+P+ K
Sbjct: 215 VGRTQEVAMILVKHGITPYVDGMGNEVARILERYPEYIKS-AKELKKTMKKVIPVEKGKR 273
Query: 361 ETL 363
E +
Sbjct: 274 EEI 276
>gi|21226797|ref|NP_632719.1| cleavage and polyadenylation specificity factor 100 kD subunit
[Methanosarcina mazei Go1]
gi|452209278|ref|YP_007489392.1| cleavage and polyadenylation specificity factor [Methanosarcina
mazei Tuc01]
gi|20905093|gb|AAM30391.1| cleavage and polyadenylation specificity factor 100 kD subunit
[Methanosarcina mazei Go1]
gi|452099180|gb|AGF96120.1| cleavage and polyadenylation specificity factor [Methanosarcina
mazei Tuc01]
Length = 637
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 146 AYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------------ 184
A +TH H DH G L K GP+YC+P T L+ + L
Sbjct: 237 AVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESG 296
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFRAS 239
V + H + L+ E V D +K+T A H G+A+ HF + DG + TGD++
Sbjct: 297 MVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIGDGLHNVVFTGDYKYE 356
Query: 240 RLMQSYPLLVNH--RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ P VN RV + + TY N P+ +D ++ + KN +++ + V+
Sbjct: 357 KTRLFDP-AVNKFPRVETVISEATYGNANAFQPALKDAEKHLQMVVKNTIER--GGIAVI 413
Query: 298 GAYSIGK-ESVFLAISKAL 315
A+++G+ + V + + +++
Sbjct: 414 PAFAVGRSQEVMIVLEESI 432
>gi|193785702|dbj|BAG51137.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+ L +
Sbjct: 12 LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVR 71
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 72 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVRVHVNK-----LDMFRNMPEILHHLT 126
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 127 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 181
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 182 NVIVRTGESSYRARFSFHSSYSEIKDFL 209
>gi|332796323|ref|YP_004457823.1| beta-lactamase domain-containing protein [Acidianus hospitalis W1]
gi|332694058|gb|AEE93525.1| beta-lactamase domain protein [Acidianus hospitalis W1]
Length = 638
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 43/219 (19%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL----- 184
+D R ++ A +TH H DH G L K GP+Y +P T ++ + L
Sbjct: 225 IDQLR---LEDLDAVVITHAHLDHCGMVPYLFKYGYEGPVYTTPPTRDVMALMQLDLLDV 281
Query: 185 --------------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG 227
V +H + L+ E V D +++T A H G+A++H + +G
Sbjct: 282 AEKDGRPLPYSAKEVRKELLHTITLDYEEVTDIAPDIRLTFYNAGHILGSAMVHLHIGEG 341
Query: 228 -QCYLHTGDFRAS------RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVV 280
++TGDF+ + R +P +V+ L ++TTY + ++E+ ++
Sbjct: 342 THNIVYTGDFKYAKTRLLDRATSEFP-----KVDTLIMETTYGAQEQT--NREESEKQLI 394
Query: 281 RLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKI 319
+ N + + K L+ V A G+E + L I+ AL K+
Sbjct: 395 DIINNTINRGGKVLIPVLAVGRGQE-MMLVINNALKNKL 432
>gi|288561234|ref|YP_003424720.1| RNA-metabolising metallo-beta-lactamase [Methanobrevibacter
ruminantium M1]
gi|288543944|gb|ADC47828.1| RNA-metabolising metallo-beta-lactamase [Methanobrevibacter
ruminantium M1]
Length = 636
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLLVNPSYIH----P 192
SI+ A L+H H DH G + + +G P+YC+ T L+ + + H P
Sbjct: 231 SIQDLDAVVLSHAHLDHCGFIPYLYHYGYEGPVYCTSATRDLMTLLQMDYIDIAHRDNNP 290
Query: 193 LELNTEHVIDGVK------------------VTLLEANHCPGAALIHFRLQDG-QCYLHT 233
L N +HV VK +TL A H G+A+ HF + DG L+T
Sbjct: 291 LPFNAKHVQKEVKHTITLDYGVVTDISPDIKLTLHNAGHIIGSAMCHFHIGDGAHNLLYT 350
Query: 234 GDFR--ASRLMQ----SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL 287
GDF+ SRL++ +P RV +++TY + PS+ + +++ +
Sbjct: 351 GDFKYEKSRLLEPATTRFP-----RVESCIMESTYGGHEDVTPSRNNAEKELMKTIYKTI 405
Query: 288 KKQPKTLVVVGAYSIGKESVFLAI 311
K+ K L+ V +++G+ + +
Sbjct: 406 KRGGKVLLPV--FAVGRAQELMIV 427
>gi|218883420|ref|YP_002427802.1| RNA procession exonuclease-like protein [Desulfurococcus
kamchatkensis 1221n]
gi|218765036|gb|ACL10435.1| exonuclease of the beta-lactamase fold involved in RNA
processing-like protein [Desulfurococcus kamchatkensis
1221n]
Length = 362
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCLL 184
I G ++D + ++ +TH H DH GGL + + I + +T L+
Sbjct: 23 ILGENISIDGYAEKPVR-----VITHAHVDHLGGLEESIKYSKMIIATSITLDLIESLNY 77
Query: 185 VN----PSY---IHPLELNTEHVIDGVK-VTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
V+ P Y PL VID + + L +A+H PGAA ++ ++ + +TGDF
Sbjct: 78 VDKYLLPYYRLKKKPLNYKECLVIDDNETLCLFQASHIPGAAQVYVEYRELRLG-YTGDF 136
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296
+ Q V ++VL +++TY NP Y+ P K+ V L + L + K + V
Sbjct: 137 KLDGKTQ-----VMKDLDVLVMESTYGNPNYRRPFKDGVPELFASLVEEGLYRY-KRVYV 190
Query: 297 VGAYSIGKESVFLAISKALGV------KIYANASRRRVLQSFDWPELSGNLCTQGNDTLL 350
G + +E++ + K + KIY + RVL+ + GN + D L
Sbjct: 191 YGYHGKVQEAMIILREKGIEAPFILPSKIYHST---RVLEKYGIK--IGNYMHE-EDMLR 244
Query: 351 HVLPMSS---LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNIT 407
+ P K + +Y + G+ VL +GW ++ +P R +
Sbjct: 245 GLNPGEKAVIFKHMNVAEYRRLDGSALHIVL----SGWEFN----------KPFRRIDDY 290
Query: 408 IYGVPYSEHSSFTELREFVQ 427
Y V S+H+ F +L E+V+
Sbjct: 291 TYLVALSDHADFDDLVEYVR 310
>gi|402081919|gb|EJT77064.1| hypothetical protein GGTG_06978 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 615
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 188 SYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS--- 239
+ + P+ L T I+ ++VTL +ANHC GA + F DG+ ++TGD R+
Sbjct: 57 TLLKPIPLETPTTIELEPGRRLRVTLFDANHCTGAVMFLFE-GDGKAVVYTGDIRSEPWH 115
Query: 240 -RLMQSYPLLVNHRVNV-----LYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+ P L+ + + +YLDT++ + + FP K D + ++R + T
Sbjct: 116 ISAIARSPCLLEYSCGIKTLDRIYLDTSFIDDTH-FPPKADGIRELLR---KVAQYPDDT 171
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
+ A++ G E+V++A++KAL +I+ ++ R + +S
Sbjct: 172 VFHFRAWTFGYEAVWIALAKALRSQIHIDSYRLGLYRSL 210
>gi|32475492|ref|NP_868486.1| cleavage and polyadenylation specifity factor-related protein
[Rhodopirellula baltica SH 1]
gi|32446034|emb|CAD75863.1| cleavage and polyadenylation specifity factor-related protein
[Rhodopirellula baltica SH 1]
Length = 488
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTA-------------------R 177
S++G A LTH H DH G + + G PI CS TA R
Sbjct: 94 SLRGIQALLLTHVHIDHAGRIPYLLAAGFDHPILCSAPTAKLLPLVMEDALKIGFTRSKR 153
Query: 178 LVRMCLLVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
L++ L + PL + H GVKV LL A H G+ + L+DG+ + +GD
Sbjct: 154 LIKKFLGQIRKLLVPLPYHQWHDCPGGVKVRLLPAGHVLGSTMFEIELKDGRRAVFSGDV 213
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDV---LNYVVRLTKNCLKKQPKT 293
A P + R ++L L++TY + + P K D L V+R T +
Sbjct: 214 GAGTNPLLNPPVSPERADLLVLESTYGDRLH--PPKADRQAELEAVIRRTLD-----DSG 266
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYANASR---RRVLQSFDWP 335
+ +V A+S+G+ L A+ +I R +RV D P
Sbjct: 267 VTIVPAFSLGRTQALLYELNAIFERIQETEHRTLMKRVDVIVDSP 311
>gi|417301658|ref|ZP_12088804.1| metallo-beta-lactamase family protein [Rhodopirellula baltica WH47]
gi|421611579|ref|ZP_16052718.1| metallo-beta-lactamase family protein [Rhodopirellula baltica SH28]
gi|440716395|ref|ZP_20896906.1| metallo-beta-lactamase family protein [Rhodopirellula baltica
SWK14]
gi|327542031|gb|EGF28529.1| metallo-beta-lactamase family protein [Rhodopirellula baltica WH47]
gi|408497673|gb|EKK02193.1| metallo-beta-lactamase family protein [Rhodopirellula baltica SH28]
gi|436438741|gb|ELP32266.1| metallo-beta-lactamase family protein [Rhodopirellula baltica
SWK14]
Length = 465
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTA-------------------R 177
S++G A LTH H DH G + + G PI CS TA R
Sbjct: 71 SLRGIQALLLTHVHIDHAGRIPYLLAAGFDHPILCSAPTAKLLPLVMEDALKIGFTRSKR 130
Query: 178 LVRMCLLVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
L++ L + PL + H GVKV LL A H G+ + L+DG+ + +GD
Sbjct: 131 LIKKFLGQIRKLLVPLPYHQWHDCPGGVKVRLLPAGHVLGSTMFEIELKDGRRAVFSGDV 190
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDV---LNYVVRLTKNCLKKQPKT 293
A P + R ++L L++TY + + P K D L V+R T +
Sbjct: 191 GAGTNPLLNPPVSPERADLLVLESTYGDRLH--PPKADRQAELEAVIRRTLD-----DSG 243
Query: 294 LVVVGAYSIGKESVFLAISKALGVKIYANASR---RRVLQSFDWP 335
+ +V A+S+G+ L A+ +I R +RV D P
Sbjct: 244 VTIVPAFSLGRTQALLYELNAIFERIQETEHRTLMKRVDVIVDSP 288
>gi|50554327|ref|XP_504572.1| YALI0E29931p [Yarrowia lipolytica]
gi|49650441|emb|CAG80176.1| YALI0E29931p [Yarrowia lipolytica CLIB122]
Length = 839
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 43/156 (27%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--------------RMCLLVNPSY-- 189
+ L+H H DH GL G +YCS +T ++ M + N +
Sbjct: 32 VWLLSHVHTDHTAGLEN--VGGLVYCSKVTKNMLVEKDPRSKRHKAYNDMAAIPNGTLKS 89
Query: 190 --------IHPLELNTEHVID----GVKVTLLEA-NHCPGAALIHFRLQ-DGQCYLHTGD 235
+ L+L+T I+ V VTLL+A NHCPGA + F LQ G+C L+TGD
Sbjct: 90 KYTPIQDRLRGLDLDTPFEINVGAYTVSVTLLDASNHCPGAVM--FLLQGKGKCVLYTGD 147
Query: 236 FRAS----RLMQSYPLLVNH-----RVNVLYLDTTY 262
RA R ++++PLL+ + +++ +YLDTT+
Sbjct: 148 IRAEKWWLRSLENHPLLLPYICGVKKLDCIYLDTTF 183
>gi|449136462|ref|ZP_21771846.1| metallo-beta-lactamase family protein [Rhodopirellula europaea 6C]
gi|448884887|gb|EMB15355.1| metallo-beta-lactamase family protein [Rhodopirellula europaea 6C]
Length = 519
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 83/196 (42%), Gaps = 33/196 (16%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTA-------------------R 177
S++G A LTH H DH G + + G PI CS TA R
Sbjct: 125 SLRGIQALLLTHVHIDHAGRIPYLLAAGFDHPILCSAPTAKLLPLVMEDALKIGFTRSKR 184
Query: 178 LVRMCLLVNPSYIHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
L++ L + PL + H GVKV LL A H G+ + L DG+ + +GD
Sbjct: 185 LIKQFLGQIRKLLVPLPYHRWHDCPGGVKVRLLPAGHVLGSTMFEIELPDGRRAVFSGDV 244
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDV---LNYVVRLTKNCLKKQPKT 293
A P + R ++L L++TY + + P K D L VVR T +
Sbjct: 245 GAGTNPLLNPPVSPERADLLVLESTYGDRLH--PPKADRQAELEAVVRRTLD-----DSG 297
Query: 294 LVVVGAYSIGKESVFL 309
+ +V A+S+G+ L
Sbjct: 298 VTIVPAFSLGRTQALL 313
>gi|76496495|ref|NP_071932.2| protein artemis isoform b [Homo sapiens]
gi|33872940|gb|AAH09185.1| DCLRE1C protein [Homo sapiens]
gi|94717600|gb|ABF47101.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) [Homo
sapiens]
gi|119606654|gb|EAW86248.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
gi|119606656|gb|EAW86250.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
gi|119606657|gb|EAW86251.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
Length = 577
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+ L +
Sbjct: 17 LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVR 76
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 77 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 131
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 132 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 186
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 187 NVIVRTGESSYRACFSFHSSYSEIKDFL 214
>gi|21427582|gb|AAM53255.1| Athabascan SCID transcript variant 1 [Homo sapiens]
gi|21427584|gb|AAM53256.1| Athabascan SCID transcript variant 2 [Homo sapiens]
gi|21427590|gb|AAM53259.1| Athabascan SCID transcript variant 5 [Homo sapiens]
gi|21427592|gb|AAM53260.1| Athabascan SCID transcript variant 6 [Homo sapiens]
Length = 572
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+ L +
Sbjct: 12 LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVR 71
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 72 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 126
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 127 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 181
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 182 NVIVRTGESSYRACFSFHSSYSEIKDFL 209
>gi|344228979|gb|EGV60865.1| hypothetical protein CANTEDRAFT_110826 [Candida tenuis ATCC 10573]
Length = 435
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 22/202 (10%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNP--SYIHPLELNTEHVI--- 201
+ L+H H DH GL + +YCS LT ++ + P Y+ + N+ I
Sbjct: 28 FLLSHCHSDHLVGLANKSFQSTVYCSELTKQIFSLDNRNAPWLRYLRGIAFNSPFSIILN 87
Query: 202 -DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS--------RLMQSYPLLVNHR 252
V +TL+ A HCPG+A+ ++ L TGD RA + M +P +
Sbjct: 88 DKKVVLTLISAYHCPGSAMFLVESEEKNV-LFTGDIRAETWWTMGLKKNMYLFPYTCGFK 146
Query: 253 -VNVLYLDTTYC---NPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVF 308
++ +YLDTT+ P + P D + +++ P +++G E +
Sbjct: 147 SLDCIYLDTTFGYRREPYIEIPPNTDGIAAAIKMLSLYPTDDPDIEFFFADHTLGFEQAW 206
Query: 309 LAISKALGVKIYANASRRRVLQ 330
I +LG ++ + R+LQ
Sbjct: 207 SMIVSSLGGSMHMS---NRILQ 225
>gi|114629492|ref|XP_001146437.1| PREDICTED: protein artemis isoform 1 [Pan troglodytes]
gi|114629494|ref|XP_001146717.1| PREDICTED: protein artemis isoform 3 [Pan troglodytes]
gi|114629496|ref|XP_001146840.1| PREDICTED: protein artemis isoform 5 [Pan troglodytes]
Length = 577
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L V+ L +
Sbjct: 17 LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLRGVLELVR 76
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 77 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 131
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 132 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 186
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 187 NVIVRTGESSYRACFSFHSSYSEIKDFL 214
>gi|21427586|gb|AAM53257.1| Athabascan SCID transcript variant 3 [Homo sapiens]
gi|21427588|gb|AAM53258.1| Athabascan SCID transcript variant 4 [Homo sapiens]
Length = 577
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+ L +
Sbjct: 17 LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVR 76
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 77 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 131
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 132 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 186
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 187 NVIVRTGESSYRACFSFHSSYSEIKDFL 214
>gi|310800610|gb|EFQ35503.1| artemis protein [Glomerella graminicola M1.001]
Length = 629
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 42/222 (18%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA----RLVRMCLLVN----------PSYIH 191
A FL+H H DH GL S +YCS T RL R +N +Y H
Sbjct: 30 ACFLSHIHSDHLAGLETLRSPF-VYCSAATREMLLRLERYPCRLNYAKGILEARVQTYKH 88
Query: 192 PLEL---------NTEHVIDGV--KVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFRAS 239
L T + G+ +VTL +ANHCPGA + F ++D + L+TGD R+
Sbjct: 89 LKNLLKPLPLETTTTLELAPGIHIQVTLFDANHCPGAVM--FLIEDSNRAILYTGDIRSE 146
Query: 240 ----RLMQSYPLLVNH-----RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
+ P ++ + ++ +YLDT++ F +K + + L +
Sbjct: 147 PWFVNSIARNPAVIEYTSGLKTLDKIYLDTSFIR-DVPFQTKAE---GIAELLRKVASYP 202
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
T+ + A++ G E V++A+SKAL +I+ + + R+ S
Sbjct: 203 TDTIFHIQAWTYGYEQVWIALSKALKSRIHVDDYKMRMFSSL 244
>gi|302890313|ref|XP_003044041.1| hypothetical protein NECHADRAFT_13421 [Nectria haematococca mpVI
77-13-4]
gi|256724960|gb|EEU38328.1| hypothetical protein NECHADRAFT_13421 [Nectria haematococca mpVI
77-13-4]
Length = 476
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 36/184 (19%)
Query: 190 IHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----R 240
+ PL L T I+ ++VTL +ANHCPGA + D + L+TGD R+
Sbjct: 59 LKPLPLETPTTIELRPGCEIQVTLFDANHCPGAVMFLIE-NDTKAILYTGDIRSEPWFVN 117
Query: 241 LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDV-----LNYVVRLTKNCLKKQPKTLV 295
M P LV + + LD Y + + EDV + L + K T+
Sbjct: 118 TMSRNPNLVEYTSGLKTLDKIYLDTSF----TEDVPFQTKAQGIAELLRKVAKYPSDTVF 173
Query: 296 VVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF-----------------DWPELS 338
A++ G E V++A+SKAL +++ + + R+ S + P L+
Sbjct: 174 HFQAWTYGYEDVWVALSKALKSQVHVDDYKLRIYGSLKSRPSEARFSSDVHLTPESPALT 233
Query: 339 GNLC 342
G++C
Sbjct: 234 GHMC 237
>gi|114629498|ref|XP_001146648.1| PREDICTED: protein artemis isoform 2 [Pan troglodytes]
gi|114629500|ref|XP_001146778.1| PREDICTED: protein artemis isoform 4 [Pan troglodytes]
gi|114629502|ref|XP_001146913.1| PREDICTED: protein artemis isoform 6 [Pan troglodytes]
gi|114629504|ref|XP_001146991.1| PREDICTED: protein artemis isoform 7 [Pan troglodytes]
Length = 572
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L V+ L +
Sbjct: 12 LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLRGVLELVR 71
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 72 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 126
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 127 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 181
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 182 NVIVRTGESSYRACFSFHSSYSEIKDFL 209
>gi|346327472|gb|EGX97068.1| DNA repair protein, putative [Cordyceps militaris CM01]
Length = 582
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 24/175 (13%)
Query: 188 SYIHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS--- 239
S + P+ L T ++ ++VTL +ANHCPGA + D L+TGD R+
Sbjct: 66 SLLKPIPLETPTTLELAPNLELQVTLFDANHCPGAVMFLIERND-TAILYTGDIRSEPWF 124
Query: 240 -RLMQSYPLLVNHRVNVLYLDTTYCNPKYK----FPSKEDVLNYVVRLTKNCLKKQPKTL 294
+ +P+L+ + + LD Y + + F +K ++ ++R K L T+
Sbjct: 125 VNSISRHPVLIEYTSGIRTLDKIYLDTSFTKDVPFQTKSQGISELLR--KVALYPA-DTV 181
Query: 295 VVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFD-------WPELSGNLC 342
A++ G E V+LA+SKAL I+ + + R+ S + L+G +C
Sbjct: 182 FYFQAWTYGYEEVWLALSKALKSPIHVDEYKMRIYASLSSKIGDHRFASLAGYMC 236
>gi|76496499|ref|NP_001029029.1| protein artemis isoform d [Homo sapiens]
gi|76496501|ref|NP_001029030.1| protein artemis isoform c [Homo sapiens]
Length = 572
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+ L +
Sbjct: 12 LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVR 71
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 72 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 126
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 127 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 181
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 182 NVIVRTGESSYRACFSFHSSYSEIKDFL 209
>gi|73667742|ref|YP_303757.1| cleavage and polyadenylation specificity factor [Methanosarcina
barkeri str. Fusaro]
gi|72394904|gb|AAZ69177.1| cleavage and polyadenylation specificity factor [Methanosarcina
barkeri str. Fusaro]
Length = 637
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 146 AYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------------ 184
A +TH H DH G L K GP+YC+P T L+ + L
Sbjct: 237 AVIVTHAHLDHQGLVPLLFKFGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESG 296
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFRAS 239
V + H + L+ E V D +K+T A H G+A+ HF + DG + TGD++
Sbjct: 297 MVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIGDGLHNVVFTGDYKYE 356
Query: 240 RLMQSYPLLVNH--RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ P VN RV + + TY N PS +D ++ + KN +++ + ++
Sbjct: 357 KTRLFDP-AVNKFPRVETVVSEATYGNSNAFQPSLKDAERHLQMVVKNTVER--GGICII 413
Query: 298 GAYSIGK-ESVFLAISKAL 315
A+++G+ + V + + +++
Sbjct: 414 PAFAVGRSQEVMIVLEESI 432
>gi|158254628|dbj|BAF83287.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+ L +
Sbjct: 12 LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVR 71
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 72 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 126
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 127 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 181
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 182 NVIVRTGESSYRACFSFHSSYSEIKDFL 209
>gi|312074317|ref|XP_003139916.1| hypothetical protein LOAG_04331 [Loa loa]
gi|307764918|gb|EFO24152.1| hypothetical protein LOAG_04331 [Loa loa]
Length = 376
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 206 VTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR--------LMQSYPLLVNHRVNVLY 257
VT L+A H PG+A+I F +G L+TGD R S+ L + R++ LY
Sbjct: 74 VTFLDAQHIPGSAMILFEFHNGFRLLYTGDCRLSKDDWIACQILKDPFTSSGFKRLDALY 133
Query: 258 LDTTYCNPKYK-FPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG 316
D+T+C + + PS V + K L+K V++ G E + AI L
Sbjct: 134 FDSTFCRREAENIPSLRQSCALCVEMVKEWLEKDSNNKVLIWCGKFGHELLLKAIWDELH 193
Query: 317 VKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
+K + + R+ ++ L+ + DT +H
Sbjct: 194 IKCHVTMMKYRIYSKINF--LADCITPVARDTRVHA 227
>gi|219851430|ref|YP_002465862.1| beta-lactamase [Methanosphaerula palustris E1-9c]
gi|219545689|gb|ACL16139.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c]
Length = 630
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 46/217 (21%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLL------------------ 184
A LTH H DH + + +G P+Y +P T L M L
Sbjct: 235 AVVLTHAHLDHCALIPLLYKYGYEGPVYSTPPTRDLASMLQLDYLEVIRKEDKKIPYTSA 294
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLH-TGDFR-- 237
V H + LN V D +K+T A H G+A+ HF L DG + TGDF
Sbjct: 295 DVKSYLKHSIVLNYGSVTDIAPDIKLTFHNAGHILGSAIAHFHLGDGLYNIAFTGDFNYG 354
Query: 238 ASRL----MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
SRL + ++P R+ L++++TY P+++D + L++ K
Sbjct: 355 KSRLFNPAVSTFP-----RLEALFMESTYGGANDMQPARKDAEEKLYETVNKVLERSGK- 408
Query: 294 LVVVGAYSIGK-ESVFLAISKAL------GVKIYANA 323
V++ A+++G+ + V LA+ + + VKIY +
Sbjct: 409 -VIIPAFAVGRSQEVMLALEEGMRLGKIPNVKIYLDG 444
>gi|148675983|gb|EDL07930.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Mus musculus]
Length = 595
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 231 LHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR ++ S L++ + +YLDTT+C+P+ Y+ PS+E L ++ L +
Sbjct: 22 LYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVR 81
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ LGV+++ + L F + P++ +L
Sbjct: 82 SWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK-----LDMFKNMPDILHHLT 136
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIR 399
T N + H ++ L + ++ +P+ + E ++
Sbjct: 137 TDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPSTMWFGERTRKTNVIV- 195
Query: 400 PLSRGNITIYGVPYSEHSSFTELREFV 426
R + Y +S HSSF+E+++F+
Sbjct: 196 ---RTGESSYRACFSFHSSFSEIKDFL 219
>gi|241747538|ref|XP_002414332.1| DNA cross-link repair protein pso2/snm1, putative [Ixodes
scapularis]
gi|215508186|gb|EEC17640.1| DNA cross-link repair protein pso2/snm1, putative [Ixodes
scapularis]
Length = 248
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 40/234 (17%)
Query: 123 YKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSP----LTARL 178
YK+I ++D F G +A+FL+H H DH GL + P + +
Sbjct: 11 YKRI-----SIDRFD-GINLNSTAFFLSHCHRDHMHGLSSTAFKTRLRARPDAKFYVSEV 64
Query: 179 VRMCLLVNPSYI----HPLEL-----NTEHV-IDG--------VKVTLLEANHCPGAALI 220
R LL P Y H + L NT V +G + VT + A HC G+ +
Sbjct: 65 SRQLLLNEPKYAWLKRHTIALPLDCPNTVTVPTNGDDHGPDYELVVTPISAEHCAGSVMF 124
Query: 221 HFRLQDGQC--YLHTGDFR-----ASRLMQSY-PLLVNHRVNVLYLDTTYCNPKYKF-PS 271
L +G C L+TGDFR + RL + P + Y+DTT C P+ + PS
Sbjct: 125 ---LLEGDCGRVLYTGDFRLAVGDSERLTALHEPSGAVKNIRCAYVDTTLCTPEAAYVPS 181
Query: 272 KEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASR 325
+ED + ++ L K + + + +G E +F A+S ++++ S+
Sbjct: 182 REDSVAALITLAKPTILAGGFLRLALPGAQLGYEGLFAALSAHFEMRVHVTRSQ 235
>gi|449549219|gb|EMD40185.1| hypothetical protein CERSUDRAFT_122252 [Ceriporiopsis subvermispora
B]
Length = 971
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 99/264 (37%), Gaps = 75/264 (28%)
Query: 130 PFTVDAFRYGSIKGCSA--YFLTHFHYDHYGGLGKRWSHGPIYCS-----------PLTA 176
P VD F S A Y LTH H DH GL R G + CS +
Sbjct: 15 PIRVDDFSAISSTREPAKLYLLTHTHTDHLNGLAARSFSGRVICSHDAKEMLLRHEIYSE 74
Query: 177 RLVRMC------------LLVNP--------SY------IHPLELNTEHVID-----GVK 205
R +R L V P SY + PL + T I V
Sbjct: 75 RALREMDLRAENMKTFRHLKVEPRKTGDGGISYAGSRDLLTPLAMQTPTAIKLNEKRSVT 134
Query: 206 VTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA--------SR--LMQSY---PLL---- 248
+T L+ANHCPGA + +G LHTGDFRA SR +Q Y P
Sbjct: 135 ITALDANHCPGAVMYLVEGDEG-AILHTGDFRAEAWFLDSLSRNPFLQRYIDKPFACPSV 193
Query: 249 ----------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
V ++V+YLDT PSK D + ++ L TL +
Sbjct: 194 DRQIEGKQSDVVQTLDVIYLDTACLLDIIDVPSKVDATSGLIELMALFPH---TTLFFIN 250
Query: 299 AYSIGKESVFLAISKALGVKIYAN 322
A++ G E + A+++A K++ +
Sbjct: 251 AWTWGYEDILKAVAQAFRSKLHVD 274
>gi|395645476|ref|ZP_10433336.1| KH-domain/beta-lactamase-domain protein [Methanofollis liminatans
DSM 4140]
gi|395442216|gb|EJG06973.1| KH-domain/beta-lactamase-domain protein [Methanofollis liminatans
DSM 4140]
Length = 629
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 30/203 (14%)
Query: 141 IKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------- 184
+ A LTH H DH L K GP+Y +P T L M L
Sbjct: 229 LSSLDAVVLTHAHLDHCALVPLLFKYGYDGPVYSTPPTRDLAAMLQLDYLDVVKKESGRQ 288
Query: 185 ------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLH-TG 234
V H + LN V D +K+T A H G+A+ HF L DG + TG
Sbjct: 289 PYTSNEVKEYIKHSITLNYGSVTDIAPDIKLTFHNAGHILGSAIAHFHLGDGLYNIAFTG 348
Query: 235 DFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
DF + P + R+ L++++TY P++ED + + +++ K
Sbjct: 349 DFNYQKTRLFSPAVSTFPRLEALFMESTYGGANALQPAREDAEAKLYDIVTRTIERGGK- 407
Query: 294 LVVVGAYSIGK-ESVFLAISKAL 315
V++ A+++G+ + V LA+ + +
Sbjct: 408 -VIIPAFAVGRSQEVMLALEEGM 429
>gi|326798528|ref|YP_004316347.1| RNA procession exonuclease [Sphingobacterium sp. 21]
gi|326549292|gb|ADZ77677.1| RNA procession exonuclease [Sphingobacterium sp. 21]
Length = 349
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 16/188 (8%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+TH H DH R+ C +A L+++ L S I ++ E I+GVKV+
Sbjct: 40 IITHAHADH-----ARFGSKHYLCHRDSATLLKLRLGPQTS-IQCIDYGEEIDINGVKVS 93
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSY---PLLVNHRVNVLYLDTTYCN 264
L A H G+A I + G+ ++ +GD++ R S P+ +H V+ ++T+
Sbjct: 94 LHPAGHIIGSAQIRLSYK-GEVWVVSGDYKLERDGISTPFDPVKCHHFVS----ESTFGL 148
Query: 265 PKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANAS 324
P Y+FP +V ++ N K +L+V YS+GK + ++ G+ IYA+ +
Sbjct: 149 PVYRFPEAYEVERDMLNWIDNNRKANINSLMV--GYSLGKAQRIIEVAGKTGLPIYAHGA 206
Query: 325 RRRVLQSF 332
+ Q
Sbjct: 207 IVNIQQRL 214
>gi|294495430|ref|YP_003541923.1| KH-domain/beta-lactamase-domain protein [Methanohalophilus mahii
DSM 5219]
gi|292666429|gb|ADE36278.1| KH-domain/beta-lactamase-domain protein [Methanohalophilus mahii
DSM 5219]
Length = 637
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 40/203 (19%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLL------------------ 184
A +TH H DH G + + +G PIYC+ T L+ + L
Sbjct: 237 AVVITHAHLDHQGLVPLLYKYGYDGPIYCTHPTRDLMVLLELDFIDVAAKDGKRIPYESA 296
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFR-- 237
V + H + L E V D +K+T A H G+A+ HF + DG + TGDF+
Sbjct: 297 DVRNALKHSIVLEYEEVTDIAPDIKLTFHNAGHIIGSAVSHFHIGDGLHNVVITGDFKYG 356
Query: 238 ASRL----MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+RL + +P RV + ++TY P+ +D + R+ K + +Q
Sbjct: 357 PTRLFNPAVNKFP-----RVETVITESTYGASNSMQPALKDAEKNLQRIIKETIDRQ--G 409
Query: 294 LVVVGAYSIGK-ESVFLAISKAL 315
+V++ A+++G+ + V + I +A+
Sbjct: 410 VVLIPAFAVGRSQEVMIVIEEAI 432
>gi|15897139|ref|NP_341744.1| hypothetical protein SSO0188 [Sulfolobus solfataricus P2]
gi|284174383|ref|ZP_06388352.1| hypothetical protein Ssol98_06962 [Sulfolobus solfataricus 98/2]
gi|384433650|ref|YP_005643008.1| hypothetical protein [Sulfolobus solfataricus 98/2]
gi|13813322|gb|AAK40534.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261601804|gb|ACX91407.1| conserved hypothetical protein [Sulfolobus solfataricus 98/2]
Length = 328
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 124/310 (40%), Gaps = 43/310 (13%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS-HGPIYCSPLTARLVRMCLLVN 186
G FT+D + +THFH DH GL K S I +P+T ++ + +
Sbjct: 16 GKRFTIDGHHERPFR-----VVTHFHADHITGLEKSISISDGIIATPITLDILSLDYAIP 70
Query: 187 PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYP 246
P L + + + + L +++H G+A + L++G +TGDF+ + P
Sbjct: 71 PRKAFGLNYDIKMTFEDENIVLKKSDHVIGSAQVLITLENGLEIGYTGDFKNPG--KGTP 128
Query: 247 LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTL---------VVV 297
+L ++L ++ TY P ++ P K+DV + ++ L P + V++
Sbjct: 129 IL---HPDILIIEATYGRPDFRRPFKDDVESLFADYVRDALMYGPVRIYGYHGKLQEVMI 185
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357
+G ++ F+ K + A + Q FD + + +
Sbjct: 186 SLRKMGVDAPFIVGGKISKMTNIAIKYGYNISQVFDESQSEAKEIMRDS---------WY 236
Query: 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHS 417
+ F ++ + G Y +L +GW + V + + Y V +S+H+
Sbjct: 237 ISFSHYNEFKRRNGKYYNFLL----SGWEFKNVV----------KKIDEKSYTVSFSDHA 282
Query: 418 SFTELREFVQ 427
F +L +V+
Sbjct: 283 DFDDLIYYVE 292
>gi|385806123|ref|YP_005842521.1| beta-lactamase [Fervidicoccus fontis Kam940]
gi|383795986|gb|AFH43069.1| beta-lactamase domain protein [Fervidicoccus fontis Kam940]
Length = 619
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 43/216 (19%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLG---KRWSHGPIYCSPLTARLVRMCLL--- 184
F VD F+ I+ A +TH H DH G L K +GP+Y + T ++ + L
Sbjct: 204 FDVDEFK---IEELDAIVITHAHLDHVGMLPFLFKYGYNGPVYMTKATRDIMVLSQLDFL 260
Query: 185 ----------------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQ 225
V + +H + + V D +++TL +A H G+A+ H +
Sbjct: 261 DIMTKEGKIPPYTQKEVKKAVLHTIPVEYGDVTDIAPDIRLTLYDAGHILGSAMAHLHIG 320
Query: 226 DG-QCYLHTGDFR------ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNY 278
+G ++TGDF+ ++ +P R+ L +++TY K PS+ + +
Sbjct: 321 NGLHNIVYTGDFKYAHTKLLNKATDKFP-----RLETLIMESTYGETKQ--PSRAEAESN 373
Query: 279 VVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKA 314
++ + + +++ K LV V + G+E + L +S+A
Sbjct: 374 LINIIRKTVQRGGKILVPVMSVGRGQE-IMLILSEA 408
>gi|182414962|ref|YP_001820028.1| ATP-dependent DNA ligase I [Opitutus terrae PB90-1]
gi|224487907|sp|B1ZZL9.1|DNLI_OPITP RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|177842176|gb|ACB76428.1| DNA ligase I, ATP-dependent Dnl1 [Opitutus terrae PB90-1]
Length = 1017
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNP-SYIHPLELNTEHVIDGVKV 206
F++H H DH +H I CS TA L+R L ++ P TE + V
Sbjct: 30 FVSHAHSDHTA------THDEILCSAGTAALMRARLDAKRIEHVLPFG-QTEQLTADCGV 82
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPK 266
TL A H G+A + L+TGDF+ R + P H ++ ++TT+ P
Sbjct: 83 TLHPAGHIFGSAQCLLEHGEHGSLLYTGDFKLRRGRSAEPCATPH-AELVIMETTFGRPH 141
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFL 309
Y FP VLN + + + V+ YS+GK L
Sbjct: 142 YVFPPTAQVLNDIATFCHETIADD--GVPVLFGYSLGKSQELL 182
>gi|336477059|ref|YP_004616200.1| KH-domain/beta-lactamase-domain-containing protein [Methanosalsum
zhilinae DSM 4017]
gi|335930440|gb|AEH60981.1| KH-domain/beta-lactamase-domain protein [Methanosalsum zhilinae DSM
4017]
Length = 636
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 40/203 (19%)
Query: 146 AYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------------ 184
A +TH H DH G L K GPIYC+P T L+ + L
Sbjct: 237 AVVITHAHLDHQGLVPLLYKYGYEGPIYCTPPTRDLMALLQLDYIDVAARDARKIPYESA 296
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFR-- 237
+ H + L+ E V D +K+T A H G+++ HF + DG+ + TGD++
Sbjct: 297 DIREVLKHTITLDYEEVTDIAPDIKLTFHNAGHILGSSISHFHIGDGRHNIVMTGDYKYG 356
Query: 238 ASRL----MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+RL + +P RV + ++TY N PS ++ + + K + +
Sbjct: 357 PTRLFDPAVNKFP-----RVETVITESTYGNSNAIQPSLKEAEKNLQNIVKRTIDRN--G 409
Query: 294 LVVVGAYSIGK-ESVFLAISKAL 315
+V++ A+++G+ + V + + +A+
Sbjct: 410 IVLIPAFAVGRSQEVMIVLEEAI 432
>gi|20092670|ref|NP_618745.1| cleavage and polyadenylation specificity factor [Methanosarcina
acetivorans C2A]
gi|19917954|gb|AAM07225.1| cleavage and polyadenylation specificity factor [Methanosarcina
acetivorans C2A]
Length = 637
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 146 AYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------------ 184
A +TH H DH G L K GP+YC+P T L+ + L
Sbjct: 237 AVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESG 296
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFRAS 239
V + H + L+ E V D +K+T A H G+A+ HF + DG + TGD++
Sbjct: 297 MVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIGDGLHNVVFTGDYKYE 356
Query: 240 RLMQSYPLLVNH--RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
+ P VN RV + + TY N P+ +D ++ + KN +++ + ++
Sbjct: 357 KTRLFDP-AVNKFPRVETVISEATYGNSNAFQPALKDAEKHLQMVVKNTVER--GGIALI 413
Query: 298 GAYSIGK-ESVFLAISKAL 315
A+++G+ + V + + +++
Sbjct: 414 PAFAVGRSQEVMIVLEESI 432
>gi|410672076|ref|YP_006924447.1| beta-lactamase-like protein [Methanolobus psychrophilus R15]
gi|409171204|gb|AFV25079.1| beta-lactamase-like protein [Methanolobus psychrophilus R15]
Length = 636
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 32/204 (15%)
Query: 141 IKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------- 184
I A LTH H DH G L K GP+YC+P T L+ + L
Sbjct: 232 INQIDAVVLTHAHLDHQGLVPLLYKYGFEGPVYCTPPTRDLMALLQLDYIDVAAKEGKRP 291
Query: 185 ------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTG 234
V H + L+ E V D VK+T A H G+A+ HF + DG + TG
Sbjct: 292 PYSSADVREVLKHTIVLDYEEVTDIAPDVKLTFHNAGHILGSAVSHFHIGDGLHNVVFTG 351
Query: 235 DFRASRLMQSYPLLVNH--RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
DF+ + + + VN RV + +++TY + PS + N + + L +
Sbjct: 352 DFKYEK-TRLFDAAVNKFPRVESVVMESTYGSANALQPSLLEAENNLKNVINTTLIRN-- 408
Query: 293 TLVVVGAYSIGK-ESVFLAISKAL 315
+V++ A+++G+ + V + + A+
Sbjct: 409 GVVLIPAFAVGRSQEVMIVLEDAI 432
>gi|409042569|gb|EKM52053.1| hypothetical protein PHACADRAFT_54509, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 589
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 99/270 (36%), Gaps = 75/270 (27%)
Query: 135 AFRYGSIKGCSA-------YFLTHFHYDHYGGLGKRWSHGPIYCSP-----------LTA 176
A R G S+ + L+H H DH GL R +YCS L
Sbjct: 15 AIRVDDFSGSSSLKTVPLLHLLSHTHTDHIQGLSARSFGHTVYCSQDAKEMLLRHEVLAE 74
Query: 177 RLVR------------MCLLVNP--------------SYIHPLELNTE---HVIDG--VK 205
R +R L + P + PL LNT + +G V
Sbjct: 75 RQLREKDVRAENIRTFKHLKIKPLTHDDGMVFYNGSRDLLKPLPLNTPTRCELSNGNHVT 134
Query: 206 VTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS----------------------RLMQ 243
+TL++ANHCPGA + + G L+TGDFRA +
Sbjct: 135 ITLIDANHCPGAVMFLIQGSLGSI-LYTGDFRAEPWYLDSLKKNPFLEKYIATWDPHISN 193
Query: 244 SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIG 303
++P V + +YLDT PSK++ + +V L K + T + ++ G
Sbjct: 194 AFPETVGETLEAIYLDTACMLSTKLIPSKDEATSGLVSLMKLFPE---STRFFINGWTWG 250
Query: 304 KESVFLAISKALGVKIYANASRRRVLQSFD 333
E ++ ++KA I+ + + V D
Sbjct: 251 YEDIYKVVAKAFRTNIHVDRYKHTVYSHLD 280
>gi|392377649|ref|YP_004984808.1| beta-lactamase domain protein [Azospirillum brasilense Sp245]
gi|356879130|emb|CCD00030.1| beta-lactamase domain protein [Azospirillum brasilense Sp245]
Length = 368
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 134 DAFRYGSIKGCS---AYFLTHFHYDHYGGLGKRWSHG--PIYCSPLTARLVRMCLLVNPS 188
DA R + G A +TH H DH G LG R G P+Y +PL ARL+ + P
Sbjct: 46 DAGRLPPLSGAGRVDAILVTHTHGDHAGALGLRHRVGSPPVYATPLAARLLPPTVAALP- 104
Query: 189 YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
L + I GV VT + H PG IH +DG L+ GD
Sbjct: 105 ----LPVRGTVEIQGVPVTTGRSGHAPGGVWIHLGTEDGGI-LYMGD 146
>gi|150400487|ref|YP_001324253.1| beta-lactamase domain-containing protein [Methanococcus aeolicus
Nankai-3]
gi|150013190|gb|ABR55641.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3]
Length = 635
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 41/205 (20%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCS------------------------ 172
+++ A +TH H DH G GL + GPIYCS
Sbjct: 230 AVEEIDAVVVTHAHLDHCGFVPGLFRYGYDGPIYCSKPTRDLMTLLQKDYIDIAEKEGKV 289
Query: 173 -PLTARLVRMCLLVNPSYIHPLELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY 230
P +++ ++ C+ +I P++ T V +K+T+ A H G+A+ H + DG
Sbjct: 290 VPYSSKDIKKCV----KHIIPIDYGVTTDVAPAIKLTMHNAGHILGSAIAHCHIGDGLYN 345
Query: 231 L-HTGD--FRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
+ +TGD F ASRL++ P + N R+ L +++TY P K + +++
Sbjct: 346 IAYTGDIKFEASRLLE--PAVCNFPRLETLIIESTYGAYDDVLPDKGETEQNFLKVIAET 403
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAI 311
+K++ K +++ + IG+ + +
Sbjct: 404 IKRKGK--IIIPVFGIGRAQELMLV 426
>gi|427784859|gb|JAA57881.1| Putative protein artemis [Rhipicephalus pulchellus]
Length = 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 125/315 (39%), Gaps = 57/315 (18%)
Query: 145 SAYFLTHFHYDHYGGL--------GKRWSHGPIYCSPLTARLVRMCLLVNPSY------- 189
+ + L+H H DH GL + +Y S ++ RL LL P Y
Sbjct: 27 TVFLLSHCHRDHMQGLDGCAFRRRLRSRRDVRLYVSAVSCRL----LLNEPKYSWLRSRL 82
Query: 190 -IHPLELNTEHVI--DG-------VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
+ PL+ T + DG V VT + ANHC G+ + + G L+TGDFR
Sbjct: 83 SVLPLDAPTTLTVPADGTAGSEYAVVVTPIPANHCAGSVMFLLEGERGGTVLYTGDFRLD 142
Query: 240 RLMQSYPLLVN------HRVNVLYLDTTYCNPKYKF-PSKEDVLNYVVRLTKNCLKKQPK 292
+ S ++ ++ Y+DTT C P + P++++ +V
Sbjct: 143 VGLASTLTSLHCDTGRVKPIDTAYVDTTLCRPDAAYVPTRQESERALVDFFAPKFAAGCS 202
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
+ + +G E++F +++ A GVK++ G + + V
Sbjct: 203 LRLRLPGAKLGYETLFASLALAFGVKVHVT---------------RGQMSRYAG--VADV 245
Query: 353 LPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVP 412
+ +L ET + + + A + +P+ ++ V R L R ++ +
Sbjct: 246 VKCLTLDAETTRIHADCECDLGPACVTVKPSAMWFAHRVAPS----RLLERLTDGLHRLC 301
Query: 413 YSEHSSFTELREFVQ 427
YS H+S E+R+ V+
Sbjct: 302 YSTHASLAEVRDLVR 316
>gi|147788138|emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
Length = 1066
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 107/272 (39%), Gaps = 57/272 (20%)
Query: 193 LELNTEHVIDG----VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR-----ASRLMQ 243
+E+ V+D VT +ANHCPGA + F G LHTGD R L Q
Sbjct: 586 IEVGQSMVVDDPDGRFGVTAFDANHCPGAVMFLFEGDFGN-ILHTGDCRLIPECLQNLPQ 644
Query: 244 SYPLLVNH----RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV-VG 298
Y + + ++LD T+ PSK + V+ NC+ K P +V +
Sbjct: 645 KYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVI----NCIWKHPDAPIVYLC 700
Query: 299 AYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPM--- 355
+ +G+E + + +S+ G KI+ + + PE C Q L H++P
Sbjct: 701 SDMLGQEEILINVSRIFGSKIFVDKANN--------PE-----CFQA---LTHMVPEILS 744
Query: 356 --SSLKFETLKDYLK-----------PYGNQYAAVLAFRPTGWTYS------ETVGNQLD 396
S +F+ + + K N L RP+ Y+ +T + +
Sbjct: 745 QDPSSRFQVFEGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKE 804
Query: 397 LIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
R I+ V YS HSS EL +Q+
Sbjct: 805 SFNEAVRDQFGIWHVCYSIHSSRQELEWALQL 836
>gi|444706050|gb|ELW47413.1| Protein artemis [Tupaia chinensis]
Length = 558
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 118/283 (41%), Gaps = 73/283 (25%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190
++D F ++K AYFL+H H DH GL P L R +
Sbjct: 14 ISIDRFDRENLKA-RAYFLSHCHKDHMKGL-----RAPTLKRRLECRFL----------- 56
Query: 191 HPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVN 250
F+ +G L+TGDFR ++ + L++
Sbjct: 57 -------------------------------FQGSNG-TVLYTGDFRLAKGEAARMELLH 84
Query: 251 -----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-G 303
+ +YLDTT+C+PK Y+ PS+E+ LN ++ L ++ + + P +V + + G
Sbjct: 85 SGGRVKDIESVYLDTTFCDPKFYQIPSREECLNGILELVRSWITRSPYHVVWLNCKAAYG 144
Query: 304 KESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLCTQGNDTLLHVLPMSSLKFET 362
E +F +S+ GV+++ + L F + P+L +L T D + K +
Sbjct: 145 YEYLFTNLSEEFGVQVHVDK-----LDMFRNMPDLLHHLTT---DRSTQIHACRHPKIKD 196
Query: 363 LKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGN 405
Y+ P N Y V+ P G T + + ++++PL R +
Sbjct: 197 FLGYICPV-NAYPNVI---PIGTTMDKVI----EILKPLCRSS 231
>gi|222445335|ref|ZP_03607850.1| hypothetical protein METSMIALI_00963 [Methanobrevibacter smithii
DSM 2375]
gi|261350104|ref|ZP_05975521.1| putative mRNA 3-end processing factor [Methanobrevibacter smithii
DSM 2374]
gi|222434900|gb|EEE42065.1| arCOG00543 universal archaeal KH-domain/beta-lactamase-domain
protein [Methanobrevibacter smithii DSM 2375]
gi|288860890|gb|EFC93188.1| putative mRNA 3-end processing factor [Methanobrevibacter smithii
DSM 2374]
Length = 636
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLLVNPSYIH----P 192
SI+ A ++H H DH G + + +G PIYC+ T L + L + H P
Sbjct: 231 SIEELDAVIISHAHLDHCGFVPYLYHYGYEGPIYCTTPTRDLTTLLQLDHLDIAHREGNP 290
Query: 193 LELNTEHVIDGVK------------------VTLLEANHCPGAALIHFRLQDGQCYL-HT 233
L N +HV +K +TL A H G+A+ H + DG L +T
Sbjct: 291 LPFNVKHVQKAIKHTITLDYGEVTDISPDIRLTLHNAGHILGSAISHMHIGDGAHNLVYT 350
Query: 234 GDFR--ASRLMQ----SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL 287
GDF+ SRL++ +P R + +++TY + PS+ +++ L
Sbjct: 351 GDFKYERSRLLEPATFRFP-----RAETVIMESTYGGREDIQPSRNSAEKEMMKTIYKTL 405
Query: 288 KKQPKTLVVVGAYSIGKESVFLAI 311
K+ K LV V +++G+ + +
Sbjct: 406 KRGGKVLVPV--FAVGRAQELMVV 427
>gi|148643098|ref|YP_001273611.1| metal-dependent RNase [Methanobrevibacter smithii ATCC 35061]
gi|148552115|gb|ABQ87243.1| predicted metal-dependent RNase [Methanobrevibacter smithii ATCC
35061]
Length = 636
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLLVNPSYIH----P 192
SI+ A ++H H DH G + + +G PIYC+ T L + L + H P
Sbjct: 231 SIEELDAVIISHAHLDHCGFVPYLYHYGYEGPIYCTTPTRDLTTLLQLDHLDIAHREGNP 290
Query: 193 LELNTEHVIDGVK------------------VTLLEANHCPGAALIHFRLQDGQCYL-HT 233
L N +HV +K +TL A H G+A+ H + DG L +T
Sbjct: 291 LPFNVKHVQKAIKHTITLDYGEVTDISPDIRLTLHNAGHILGSAISHMHIGDGAHNLVYT 350
Query: 234 GDFR--ASRLMQ----SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL 287
GDF+ SRL++ +P R + +++TY + PS+ +++ L
Sbjct: 351 GDFKYERSRLLEPATFRFP-----RAETVIMESTYGGREDIQPSRNSAEKEMMKTIYKTL 405
Query: 288 KKQPKTLVVVGAYSIGKESVFLAI 311
K+ K LV V +++G+ + +
Sbjct: 406 KRGGKVLVPV--FAVGRAQELMVV 427
>gi|298674377|ref|YP_003726127.1| KH-domain/beta-lactamase-domain-containing protein [Methanohalobium
evestigatum Z-7303]
gi|298287365|gb|ADI73331.1| KH-domain/beta-lactamase-domain protein [Methanohalobium
evestigatum Z-7303]
Length = 638
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 40/203 (19%)
Query: 146 AYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------------ 184
A LTH H DH G L K GP+YC+ T L + L
Sbjct: 237 AVILTHAHLDHSGFIPLLYKYGYQGPVYCTLPTRDLSALLQLDYIDVAGKEGRIVPYESS 296
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFR-- 237
V + H + L+ E V D +K+T + H G+A+ HF + DG + TGD++
Sbjct: 297 QVREALKHTITLDFEEVTDIAPDIKLTFHNSGHILGSAIAHFHIGDGLHNVVFTGDYKYG 356
Query: 238 ASRL----MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
++RL + +P RV + ++TY + P+ +D ++ ++ N L+K
Sbjct: 357 STRLFDPAVNKFP-----RVETVVTESTYGSSNAVQPTLKDAEKHLQQVIINTLQKD--G 409
Query: 294 LVVVGAYSIGK-ESVFLAISKAL 315
+V++ A+++G+ + V + + A+
Sbjct: 410 IVLIPAFAVGRSQEVMIVLEDAI 432
>gi|257388929|ref|YP_003178702.1| beta-lactamase [Halomicrobium mukohataei DSM 12286]
gi|257171236|gb|ACV48995.1| beta-lactamase domain protein [Halomicrobium mukohataei DSM 12286]
Length = 551
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 70/165 (42%), Gaps = 26/165 (15%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID- 202
+A LTH H DHY LG+ G PI +P T ++ L +Y E TE VID
Sbjct: 55 TAVCLTHAHLDHYESLGRVIQDGAPILATPSTTAILEDVLAAGEAYYDITE--TERVIDR 112
Query: 203 ------------GVKVTLLEANHCPGAALIHFRLQDGQCY---LHTGDFRASRLMQSYP- 246
G+ V + A H PGA F ++D Y L TGDF R YP
Sbjct: 113 LDACDSWTRLVEGLHVHPVPAGHAPGACGFLFAVRDDDVYRTILATGDF-TRRGAAGYPG 171
Query: 247 LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
L + V+VL L T N ++ + E V +T+ L P
Sbjct: 172 LPTDLPVDVLVL-TGATNSSFEATATE----LVTSITERVLAGAP 211
>gi|350409885|ref|XP_003488876.1| PREDICTED: protein artemis-like [Bombus impatiens]
Length = 159
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 22/151 (14%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH------GPIYCSPLTAR 177
K+IPG +VD F G S +FL+H H DH GL + YCSP++
Sbjct: 9 KEIPGI--SVDRFD-GENLTSSIFFLSHCHSDHMHGLSDTFFEYIDEYKKCFYCSPISKA 65
Query: 178 LVRMCLLVNPSYIHPLELNTEHVIDGVK---------VTLLEANHCPGAALIHFRLQDGQ 228
L+ S + + +N VI+ + VT + A HCPG+ + F +D
Sbjct: 66 LLESRFKFKSSCVKEIGINIPSVIEYITENEEKILICVTSIPAGHCPGSVMFLFE-KDNI 124
Query: 229 CYLHTGDFRASRLMQSYP-LLVNHRVNVLYL 258
L+TGDFR + + +P L V+ +V V Y+
Sbjct: 125 SVLYTGDFRINPI--DFPKLKVDKKVCVEYM 153
>gi|410248330|gb|JAA12132.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 577
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ Y + +YLDT C+P+ Y+ PS+E+ L V+ L +
Sbjct: 17 LYTGDFRLVQGEAARMELLYSGGRVKDIQSVYLDTMLCDPRFYQIPSREECLRGVLELVR 76
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 77 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 131
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 132 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 186
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 187 NVIVRTGESSYRACFSFHSSYSEIKDFL 214
>gi|91772428|ref|YP_565120.1| beta-lactamase-like protein [Methanococcoides burtonii DSM 6242]
gi|91711443|gb|ABE51370.1| RNA-metabolizing metallo-beta-lactamase protein [Methanococcoides
burtonii DSM 6242]
Length = 636
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 40/203 (19%)
Query: 146 AYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------------ 184
A +TH H DH G L K GPIYC+ T ++ + L
Sbjct: 237 AVVITHAHLDHQGLVPLLYKYGYEGPIYCTSPTRDIMTLLQLDFIDVAAKEGKKPPYEST 296
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFR-- 237
V + H + L+ E V D VK+T A H G+A+ HF + DG + TGD++
Sbjct: 297 NVRDALKHTIALDYEEVTDIAPDVKLTFHNAGHIIGSAISHFHIGDGLHNVVVTGDYKYG 356
Query: 238 ASRL----MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+RL + +P RV + ++TY PS ++ + ++ KN L K
Sbjct: 357 PTRLFDPAVNKFP-----RVETVITESTYGAASAVQPSLKEAEKNLQQIIKNTLNN--KG 409
Query: 294 LVVVGAYSIGK-ESVFLAISKAL 315
+V++ A+++G+ + V + + A+
Sbjct: 410 IVLIPAFAVGRSQEVMIVLEDAI 432
>gi|330835859|ref|YP_004410587.1| beta-lactamase domain-containing protein [Metallosphaera cuprina
Ar-4]
gi|329567998|gb|AEB96103.1| beta-lactamase domain-containing protein [Metallosphaera cuprina
Ar-4]
Length = 638
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL----- 184
+D R ++ A LTH H DH G L K GP+Y + T ++ + L
Sbjct: 226 IDQLR---LEDLDAVVLTHAHLDHSGMIPFLFKYGYEGPVYTTQPTRDIMALMQLDMLDV 282
Query: 185 --------------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG 227
V +H + L+ E V D +++T A H G+A+ H + DG
Sbjct: 283 ADKEGRPLPYSAKEVRKELLHTITLDYEEVTDIAPDIRLTFYNAGHIIGSAMAHLHIGDG 342
Query: 228 -QCYLHTGDFRASRL------MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVV 280
++TGDF+ +R + +P RV+ L ++TTY + +++ ++
Sbjct: 343 VHNLVYTGDFKYARTRLLDRAVSEFP-----RVDTLIMETTYGVQEQT--NRDQSEKKLI 395
Query: 281 RLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKI 319
N + + K L+ V A G+E + L I+ A+ K+
Sbjct: 396 ETINNTINRGGKVLIPVLAVGRGQE-IMLVINDAMKKKM 433
>gi|374633103|ref|ZP_09705470.1| universal archaeal KH-domain/beta-lactamase-domain protein
[Metallosphaera yellowstonensis MK1]
gi|373524587|gb|EHP69464.1| universal archaeal KH-domain/beta-lactamase-domain protein
[Metallosphaera yellowstonensis MK1]
Length = 639
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL----- 184
+D R ++ A LTH H DH G L K GP+Y + T ++ + L
Sbjct: 226 IDQLR---LEDLDAVVLTHAHLDHSGMIPFLFKYGYEGPVYATQPTRDIMALMQLDMLDI 282
Query: 185 --------------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG 227
V +H + L+ E V D +++T A H G+A+ H + DG
Sbjct: 283 SEKEGRPLPYSAKEVRKELLHTITLDYEEVTDIAPDIRLTFYNAGHIIGSAMAHLHIGDG 342
Query: 228 QCYL-HTGDFRASRL------MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVV 280
L +TGDF+ +R + +P RV+ L ++TTY ++E+ ++
Sbjct: 343 THNLVYTGDFKYARTRLLDRAVAEFP-----RVDTLIMETTYGAQGQT--NREESEKQLI 395
Query: 281 RLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKI 319
+ + + K L+ V A G+E + L I+ A+ K+
Sbjct: 396 DVINKTINRGGKVLIPVLAVGRGQE-IMLVINDAMKRKL 433
>gi|433639766|ref|YP_007285526.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Halovivax ruber XH-70]
gi|433291570|gb|AGB17393.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Halovivax ruber XH-70]
Length = 571
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 18/118 (15%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSH-GPIYCSPLTARLVRMCLLVNPSY------------IH 191
SA LTH H DHY LG+ H P+Y +P TA+++ + +
Sbjct: 55 SAVCLTHAHLDHYQSLGEALDHAAPLYAAPDTAQILEDVFEAGEDHYDLAGTDRVLEQLT 114
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDG---QCYLHTGDFRASRLMQSYP 246
P++ T+ ++ G++V + A H PGAA F ++DG + L TGDF R YP
Sbjct: 115 PIDEWTQ-IVSGLRVCPVPAGHAPGAAGFLFEVEDGDERRTILITGDFTMRR-AAGYP 170
>gi|397780985|ref|YP_006545458.1| hypothetical protein BN140_1819 [Methanoculleus bourgensis MS2]
gi|396939487|emb|CCJ36742.1| putative protein MJ1236 [Methanoculleus bourgensis MS2]
Length = 630
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 99/238 (41%), Gaps = 47/238 (19%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDH---YGGLGKRWSHGPIYCSPLTARLVRMCLL 184
GTP+ Y + A LTH H DH L K GP+Y +P T L M L
Sbjct: 218 GTPYIYVPEIY-PLDSLDAVVLTHAHLDHCALVPLLFKYGYEGPVYSTPPTRDLSAMLQL 276
Query: 185 -------------------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHF 222
V H + LN V D +K+T A H G+A+ HF
Sbjct: 277 DYLDVVRKETDKIPYTSNEVKTYIKHSITLNYGSVTDIAPDIKLTFHNAGHILGSAIAHF 336
Query: 223 RLQDGQCYLH-TGDF--RASRL----MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDV 275
+ +G + TGDF + +RL + S+P R+ L++++TY P + D
Sbjct: 337 HIGEGLYNIAFTGDFNYQKTRLFSPAVSSFP-----RLEALFMESTYGGSNDIQPQRRDA 391
Query: 276 LNYVVRLTKNCLKKQPKTLVVVGAYSIGK-ESVFLAISKAL------GVKIYANASRR 326
+ LK+ K V++ A+++G+ + V LA+ + + VKIY + R
Sbjct: 392 EERLYEAVSTTLKRGGK--VIIPAFAVGRSQEVMLALEEGIRKKKIPPVKIYLDGMIR 447
>gi|126459656|ref|YP_001055934.1| mRNA 3-end processing factor [Pyrobaculum calidifontis JCM 11548]
gi|126249377|gb|ABO08468.1| putative mRNA 3-end processing factor [Pyrobaculum calidifontis JCM
11548]
Length = 319
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 95/227 (41%), Gaps = 37/227 (16%)
Query: 201 IDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDT 260
+ GV+V + +A H G+ + L DG L TGD+ + + + ++L +
Sbjct: 88 VGGVEVAVFDAGHIVGSVMYLVEL-DGVQILITGDYSVYGSILTDGAEPVEKPDILITEA 146
Query: 261 TYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIY 320
TY +P Y FP+K DV N ++ L + ++ V + AY +GK +S LG +
Sbjct: 147 TYGDPAYVFPNKADVYNELLDLVERHAGERG---VAIAAYPLGKAQ---EVSALLGSRAK 200
Query: 321 ANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAF 380
A+ R ++ G D + V+P SLK P G +
Sbjct: 201 AHPLVARYNRALG--------IRSGTDGDVVVVP--SLK-------AAPPG-----FVKV 238
Query: 381 RPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
TGW E R RG IYGVP S+HS + L EFV
Sbjct: 239 EATGWYSDEEYRR-----RSAERG---IYGVPLSDHSDYVGLIEFVN 277
>gi|292653922|ref|YP_003533820.1| metallo-beta-lactamase domain protein [Haloferax volcanii DS2]
gi|448291159|ref|ZP_21482289.1| metallo-beta-lactamase domain protein [Haloferax volcanii DS2]
gi|291369709|gb|ADE01937.1| metallo-beta-lactamase superfamily domain protein [Haloferax
volcanii DS2]
gi|445576313|gb|ELY30769.1| metallo-beta-lactamase domain protein [Haloferax volcanii DS2]
Length = 566
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLLVNPSY---------IHPLE 194
+A LTH H DHY LG SHG PIY TAR++ L + ++ LE
Sbjct: 55 TAICLTHAHLDHYQSLGTNLSHGPPIYTGDGTARILEDVLETGREHHGFTQTEEVLNRLE 114
Query: 195 LNTE--HVIDGVKVTLLEANHCPGAALIHFRLQDG---QCYLHTGDFRASRLMQSYP--- 246
L T + G++V + A H PGA F + D + L TGDF +R YP
Sbjct: 115 LITSWTQIAPGLRVHPVPAGHTPGATGFLFEVTDDDVRRTILVTGDF-TTRRAAGYPGFN 173
Query: 247 LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTK 284
L + V+ L L T N +++ P+ D + ++ T+
Sbjct: 174 LDLPVEVDTLVL-TAATNDEFE-PTLTDAIGTILERTR 209
>gi|355571913|ref|ZP_09043121.1| KH-domain/beta-lactamase-domain protein [Methanolinea tarda NOBI-1]
gi|354825009|gb|EHF09244.1| KH-domain/beta-lactamase-domain protein [Methanolinea tarda NOBI-1]
Length = 629
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 146 AYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------------ 184
A LTH H DH L K GP+Y +P T L M L
Sbjct: 234 AVVLTHAHLDHCALVPLLFKYGYDGPVYSTPPTRDLSAMLQLDYLDVVSKEDRKIPYSSN 293
Query: 185 VNPSYI-HPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLH-TGDFRAS 239
SYI H + LN V D +K+T A H G+A+ HF + DG + TGDF S
Sbjct: 294 EVKSYIKHSITLNYGSVTDIAPDIKLTFHNAGHILGSAIAHFHIGDGLYNIAFTGDFNFS 353
Query: 240 RLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
+ P N R+ L +++TY P++ + + N +++ K V++
Sbjct: 354 KSRLFNPATCNFPRLEALIMESTYGGSGDIQPTRAEAEEKLYETVNNTIRRGGK--VIIP 411
Query: 299 AYSIGK-ESVFLAISKAL------GVKIYANASRRRVLQ-SFDWPE-LSGNLCTQ 344
A+++G+ + V LA+ + + VKIY + R +PE L+ L TQ
Sbjct: 412 AFAVGRSQEVMLALEEGMRRQKIPTVKIYLDGMIREATAIHTTYPEYLNSELRTQ 466
>gi|119494059|ref|ZP_01624611.1| hypothetical protein L8106_04196 [Lyngbya sp. PCC 8106]
gi|119452196|gb|EAW33398.1| hypothetical protein L8106_04196 [Lyngbya sp. PCC 8106]
Length = 518
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 148 FLTHFHYDHYGGL---GKRWSHGPIYCSPLTARLV-----RMCLLVNPSYIHPLELNTE- 198
F TH H DH GL + + PIY S +TA+L+ + P + PL +E
Sbjct: 35 FCTHAHADHAIGLLALHQAYPQLPIYASEVTAQLLPLNWPEISPQEMPQFCQPLSWKSEI 94
Query: 199 HVIDGVKVTLLEANHCPGAALIHFRLQDGQ---CYLHTGDF--RASRLMQSYPL--LVNH 251
+ G+ TL A H PGAA I + + L+TGDF SRL++ PL L +
Sbjct: 95 QLQKGLSATLFPAGHLPGAAAILLKYHAPERTYKLLYTGDFFLSNSRLVEGLPLGELRSL 154
Query: 252 RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFL 309
+ +VL L+ +Y ++ P + + N + + L L +G+E + L
Sbjct: 155 KPDVLILEGSYGTARH--PHRRQLENQLAERIEQALTSGYSILFPTPPLGLGQELLML 210
>gi|357616635|gb|EHJ70295.1| putative Artemis protein [Danaus plexippus]
Length = 437
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 29/235 (12%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK-------RWSHGPIYCSPLTA 176
+++PG VD F + AYFL+H H DH GL + S IY + L+A
Sbjct: 14 EELPG--IYVDNFENAAKVNARAYFLSHCHADHMHGLSSEELMATLKKSGAKIYTTELSA 71
Query: 177 RLVRMCLLVNPS-YIHPLELNTEHVIDG------------VKVTLLEANHCPGAALIHFR 223
+++ + + ++ L++ ++ + VTL+ A H G+ + FR
Sbjct: 72 AIIKTDVNKDIGDHVQSLKMGGTQILSFPSIPEQNIPELLLTVTLIPAGHSAGSTMFLFR 131
Query: 224 LQDGQCYLHTGDFRAS-RLMQSYPLLVNH----RVNVLYLDTTYCNPKY-KFPSKEDVLN 277
+ L TGDFR + + Y L + ++ LY+DTT+ + Y FP + + +
Sbjct: 132 -TTTKTILFTGDFRMNPNDLPKYSALHDDGHPIKLTSLYVDTTFLSYNYDNFPKRSESIE 190
Query: 278 YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
+ K L + + + + G E F I + LG+K++ R + S
Sbjct: 191 KMCSEIKKWLSYEQNAVSLHTSAKYGYEFAFNEIYRRLGLKVHVPTERWSLYSSI 245
>gi|428180388|gb|EKX49255.1| hypothetical protein GUITHDRAFT_104783 [Guillardia theta CCMP2712]
Length = 420
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 195 LNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS---RLMQSYP 246
+N H+I + + + ANH PG+ + H G LH+GDFR +++P
Sbjct: 1 MNRSHIIRINSKVALSIVAINANHTPGSVMFHVSGGFGN-RLHSGDFRYDPKIHTTENFP 59
Query: 247 LLVNHRVNVLYLDTTYCNPKYKFP-SKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKE 305
L RV+ LYLDTT +P + F +KE +V + ++ + LV+ G+E
Sbjct: 60 CL--GRVDELYLDTTLFHPSWSFSLTKEQSCEIIVNIIRDFGLDREIHLVLD---YFGQE 114
Query: 306 SVFLAISKALGVKIYAN 322
S+ AI KA KI+ N
Sbjct: 115 SIIKAIYKAFEEKIFLN 131
>gi|110639889|ref|YP_680099.1| RNA procession exonuclease [Cytophaga hutchinsonii ATCC 33406]
gi|110282570|gb|ABG60756.1| exonuclease of the beta-lactamase fold involved in RNA processing
[Cytophaga hutchinsonii ATCC 33406]
Length = 349
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+TH H DH +W + L+ +++ L N ++ +E E +++GVK++
Sbjct: 29 IITHAHSDH-----AKWGNEKYLSHHLSVPVLKFRLGEN-IHVRGVEYGEEILMNGVKIS 82
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSY---PLLVNHRVNVLYLDTTYCN 264
L A H PG+A I + G+ ++ +GD++ + S P+ H V ++T+
Sbjct: 83 LHPAGHIPGSAQIRLEYK-GEIWVASGDYKLQQDQVSAAFEPVRCQHFVT----ESTFGL 137
Query: 265 PKYKFPSKEDV-LNYVVRLTKNCLKKQPKTLVVVGAYSIGK-ESVFLAISKALGVKIYAN 322
P Y+FP ED + KN K++ K V++G Y++GK + + + A+G IY +
Sbjct: 138 PVYRFPQAEDTHADINTWWQKN--KEEGKASVIIG-YALGKAQRIIKHLDPAIGT-IYTH 193
Query: 323 AS 324
+
Sbjct: 194 GA 195
>gi|146305000|ref|YP_001192316.1| beta-lactamase domain-containing protein [Metallosphaera sedula DSM
5348]
gi|145703250|gb|ABP96392.1| beta-lactamase domain protein [Metallosphaera sedula DSM 5348]
Length = 642
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL----- 184
+D R ++ A LTH H DH G L K GP+Y + T ++ + L
Sbjct: 226 IDQLR---LEDLDAVVLTHAHLDHSGMIPFLFKYGYDGPVYTTQPTRDIMALMQLDLLDV 282
Query: 185 --------------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG 227
V +H + L+ E V D +++T A H G+A+ H + DG
Sbjct: 283 ADKEGRPLPYSAKEVRKELLHTITLDYEEVTDIAPDIRLTFYNAGHIIGSAMAHLHIGDG 342
Query: 228 -QCYLHTGDFRASRL------MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVV 280
++TGDF+ +R + +P RV+ L ++TTY ++++ ++
Sbjct: 343 VHNLVYTGDFKYARTRLLDRAVSEFP-----RVDTLIMETTYGAQLQT--NRDESEKQLI 395
Query: 281 RLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKI 319
+ L + K L+ V A G+E + L I+ A+ K+
Sbjct: 396 DVINKTLNRGGKVLIPVLAVGRGQE-IMLVINDAMKRKL 433
>gi|110668252|ref|YP_658063.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Haloquadratum walsbyi DSM 16790]
gi|109625999|emb|CAJ52447.1| homolog to mRNA 3'-end processing factor [Haloquadratum walsbyi DSM
16790]
Length = 332
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 123/314 (39%), Gaps = 57/314 (18%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL--VRMCLLV 185
G D GS K ++H H DH + G I S LT L VR
Sbjct: 18 GERIVCDGVPKGSSKQEVTTAVSHAHGDHLVD-----TAGEIVASELTVALASVRQSECK 72
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQC-YLHTGDFRAS-RLMQ 243
HP V L+ A H G+ + + C YL+TGD R S RL
Sbjct: 73 PEKITHP------------AVDLIPAGHIAGSRAVLLTDPETDCRYLYTGDCRLSDRLYL 120
Query: 244 SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIG 303
V+ +VL L+TTY +PKY+FPS E N + + L + +V++ Y++G
Sbjct: 121 DGFDPVD--ADVLILETTYGDPKYRFPSPEKTHNRI----REWLAQTMDDVVILFGYALG 174
Query: 304 ---KESVFLA--------ISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
K V L I+ A+ SR + SFD + ++ Q D + V
Sbjct: 175 RAQKLQVLLESTARSRVFITDAIAELNAVIESRHEI--SFDARRYTTDVTLQPGDAV--V 230
Query: 353 LPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVP 412
LPM + + ++ ++ A +GW ++ Q R + +G +
Sbjct: 231 LPMQTTRLGWIESLIETTDAITAGF-----SGWAIDDSFIYQ----RGVDKGFV------ 275
Query: 413 YSEHSSFTELREFV 426
S+H + EL E V
Sbjct: 276 LSDHCDYDELIELV 289
>gi|114800462|ref|YP_760377.1| hypothetical protein HNE_1669 [Hyphomonas neptunium ATCC 15444]
gi|114740636|gb|ABI78761.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 333
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+TH H DH R HG + +P T L M P+ P+ + V+VT
Sbjct: 34 IVTHGHADH-----ARAGHGRVIATPET--LAIMEARYGPTEGWPVAYGETVEVGDVRVT 86
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
L A H G+A + + G+ + TGDF+ + + P V +VL + T+ P +
Sbjct: 87 LYPAGHVLGSAQVLLE-RAGERVIVTGDFKRA-ADPTCPPFVPIACDVLITEATFGLPVF 144
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK 304
+ P D + V+ L + P+ V+VGAY++GK
Sbjct: 145 RHPPASDEIAKVM----ERLAESPERCVLVGAYALGK 177
>gi|448323405|ref|ZP_21512867.1| mRNA 3'-end processing factor [Natronococcus amylolyticus DSM
10524]
gi|445599897|gb|ELY53919.1| mRNA 3'-end processing factor [Natronococcus amylolyticus DSM
10524]
Length = 329
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 24/184 (13%)
Query: 149 LTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTL 208
L+H H DH R G + CS +TA L R PLE T +D L
Sbjct: 34 LSHAHGDHL----YREDPGAVICSDVTAALAR-----TRREDTPLERTTHPAVD-----L 79
Query: 209 LEANHCPGAALIHFRLQDGQCYLHTGD--FRASRLMQSY-PLLVNHRVNVLYLDTTYCNP 265
+A H PG+ H DG Y +TGD R ++ + P V+ +VL ++ TY P
Sbjct: 80 HDAGHVPGSRATHITDPDGTTYCYTGDCSTRDRFYLEGFDPNSVD--ADVLVIEATYGEP 137
Query: 266 KYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK-ESVFLAISKALGVKIYANAS 324
+Y P +E V +V + L+ V++ Y++G+ + + L ++++ +++ +
Sbjct: 138 EYVLPPQETVEAEIV----DWLEDTDDRPVLLFGYTLGRVQELQLLVNRSSRDRLFVTQA 193
Query: 325 RRRV 328
R+
Sbjct: 194 TERI 197
>gi|15920543|ref|NP_376212.1| cleavage and polyadenylation specificity factor large subunit
[Sulfolobus tokodaii str. 7]
gi|342306155|dbj|BAK54244.1| putative ribonuclease J [Sulfolobus tokodaii str. 7]
Length = 637
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 43/219 (19%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL----- 184
+D R ++ A +TH H DH G L K +GP+Y + T ++ + L
Sbjct: 226 IDQVR---LEDIDAVVITHAHLDHCGMVPLLFKYGYNGPVYTTAPTRDIMALMQLDALDV 282
Query: 185 --------------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG 227
V +H + L+ E V D +K+T A H G+A+ H + DG
Sbjct: 283 AEKEGRPLPYTAKEVRKELLHTITLDYEEVTDIAPDIKLTFYNAGHILGSAMAHLHIGDG 342
Query: 228 -QCYLHTGDFRASRLM------QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVV 280
++TGDF+ +R +P RV+ + ++TTY + ++ ++E+ ++
Sbjct: 343 THNIVYTGDFKYARTKLLDKANDEFP-----RVDTIIMETTYGD--HEQENREEAEAKLI 395
Query: 281 RLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKI 319
+ + + + L+ V A G+E + L ++ A+ K+
Sbjct: 396 EIINRTISRGGRVLIPVLAVGRGQE-IMLVLNDAMKKKL 433
>gi|448419012|ref|ZP_21580168.1| mRNA 3'-end processing factor [Halosarcina pallida JCM 14848]
gi|445675998|gb|ELZ28525.1| mRNA 3'-end processing factor [Halosarcina pallida JCM 14848]
Length = 330
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 115/291 (39%), Gaps = 52/291 (17%)
Query: 149 LTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTL 208
++H H DH+ CSPLTA L + PL T+ ++ L
Sbjct: 41 VSHAHGDHF-----PEGEATAVCSPLTADLASARREI------PLHATTDD-----RIEL 84
Query: 209 LEANHCPGAALIHFRLQDGQCYLHTGDF--RASRLMQSYPLLVNHRVNVLYLDTTYCNPK 266
L A H G+ DG YL+TGD R+ + + +VL +TTY P+
Sbjct: 85 LPAGHVAGSTAALVTDPDGTRYLYTGDVCTRSRFYLDGFE---PPDADVLITETTYGEPE 141
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG-VKIYANASR 325
Y FP E V +V + L++ + +++ G Y++G+ +++ G +++ +
Sbjct: 142 YVFPDHETVAADIV----SWLRETDEPVILFG-YALGRAQKLQLLAEEAGRERLFTTDAV 196
Query: 326 RRVLQ--------SFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAV 377
RV SF D L VLPM++ + + +++ + G A
Sbjct: 197 FRVNDVVASHLDVSFGADRYEAETELGPGDAL--VLPMTTARIDWIRNLAEETGALKAGF 254
Query: 378 LAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
+GW V + + RG P S+H F ELR+ V
Sbjct: 255 -----SGW----AVDDAFEF-----RGEFD-ETFPLSDHCDFAELRDLVDA 290
>gi|10432603|dbj|BAB13820.1| unnamed protein product [Homo sapiens]
Length = 577
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDTT+C+ + Y+ PS+E+ L+ V+ L +
Sbjct: 17 LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDRRFYQIPSREECLSGVLELVR 76
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 77 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 131
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 132 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 186
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 187 NVIVRTGESSYRACFSFHSSYSEIKDFL 214
>gi|352683091|ref|YP_004893615.1| mRNA 3'-end processing factor [Thermoproteus tenax Kra 1]
gi|350275890|emb|CCC82537.1| mRNA 3'-end processing factor [Thermoproteus tenax Kra 1]
Length = 635
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLL----------VNPSYI-- 190
A L+H H DH G L + +G P+Y + T L + L + P Y
Sbjct: 228 AVVLSHAHMDHVGCLPYLYKYGYKGPVYMTDPTKYLTYILLTDYVELKEREGLTPPYTKS 287
Query: 191 -------HPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFRAS 239
H + L+ E V D VK+T +A H G+ALIH + +G+ L+TGDF+
Sbjct: 288 DIEALMYHTITLDYEEVTDIAPDVKLTFYDAGHEIGSALIHLHIGNGRYNILYTGDFKFG 347
Query: 240 RL-MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
R + + + RV +L +++TY P + + N +V+ +++ K V++
Sbjct: 348 RTNLLNRAVNKFKRVEMLIMESTYGGRDDVQPPRIEAENTLVKNITETIERGGK--VLIP 405
Query: 299 AYSIGKESVFLAI 311
A+S G+ L I
Sbjct: 406 AFSTGRAQEILYI 418
>gi|407851646|gb|EKG05451.1| hypothetical protein TCSYLVIO_003474 [Trypanosoma cruzi]
Length = 522
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 145/390 (37%), Gaps = 91/390 (23%)
Query: 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL------ 178
K+P P +D F Y + Y L+HFH DH GL W G I C +T L
Sbjct: 2 KVPRFPVYIDQF-YSEDNPDAVYLLSHFHTDHMKGLSHSWCAGLIICEAVTRALLIQKYG 60
Query: 179 ------------------VRMCLLVN----PSYIHPLELNTEHVIDG------------- 203
+RM ++ P + E+ + V D
Sbjct: 61 GCMEKCSVSLPLFQRTPFLRMVTTISSKVAPDSVEEREVVLDTVKDNGSDENCGSNFGED 120
Query: 204 --VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR----ASRLMQSYPLLVNHRVNVLY 257
V + LL A H PG+ + G L+TGDF+ A R + P +H V+ +Y
Sbjct: 121 EMVMLYLLPAFHIPGSVMFFLETPFGNV-LYTGDFKYDEYARRRLD--PFFADHAVDHVY 177
Query: 258 LDTTY-------CNPKYKFPSKEDVLNYVV------------------RLTKNCLKKQ-- 290
+D T+ +P + VL+ ++ R+ + L+K
Sbjct: 178 VDDTWLHLGIPELSPSVRGNEGTRVLSKMLSETELEEAIEAVGRRMDWRVREFSLEKNST 237
Query: 291 --PKTLVVVGAY---SIGKESVFLAISKALGVKIYANASRR---RVLQSFD--WPELSGN 340
P VV Y GKE + ++ LGV + + SR R+L SF+ E+
Sbjct: 238 DPPCGPYVVRVYLHNQFGKEHIVQRLATRLGVPVVVDDSRYERIRLLASFNETTAEVHEK 297
Query: 341 LCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRP 400
C + + + S + E + LK + A R G + V + L+R
Sbjct: 298 FCLVADRFVTYANCKSFPRIEVVSS-LKEIAPEELRAAAERSGGTPHYGIVMSGWALLRR 356
Query: 401 LSRGN--ITIYGVPYSEHSSFTELREFVQV 428
G+ ++ +P + HS+ ++ +F+ +
Sbjct: 357 RGDGDDEALVWEIPTTLHSTPQQIIDFIAL 386
>gi|431917669|gb|ELK16934.1| Protein artemis [Pteropus alecto]
Length = 774
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 124/275 (45%), Gaps = 44/275 (16%)
Query: 169 IYCSPLTARLVRMCLLVNPSY------IHPLELNTEHVIDGVKVTLLEANHCPGAALIHF 222
+YCSP+T L LL +P Y I +E+ T I V E N+
Sbjct: 32 LYCSPVTKEL----LLTSPKYRFWEKRIISIEIETPTQIPLVDEASGEGNN--------- 78
Query: 223 RLQDGQCYLHTGDFRASRLMQSYPLLVNH-----RVNVLYLDTTYCNPK-YKFPSKEDVL 276
L+TGDFR ++ + L+++ + +YLDTT+C+PK Y+ PS+ + L
Sbjct: 79 -----GTVLYTGDFRLAKGETARMELLHYGGRVQDIQSVYLDTTFCDPKFYQIPSRAECL 133
Query: 277 NYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DW 334
+ ++ L + + + P +V + + G E +F +S+ G++++ + L F +
Sbjct: 134 SGILELVRGWISRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVDK-----LDMFRNM 188
Query: 335 PELSGNLCTQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETV 391
P++ +L T + + H ++ L + ++ +P+ + E
Sbjct: 189 PDILHHLTTDRSTQIHACRHPKAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERT 248
Query: 392 GNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ D+I R + Y +S HSS++E+++F+
Sbjct: 249 -RKTDVI---VRTGESSYRACFSFHSSYSEIKDFL 279
>gi|385803685|ref|YP_005840085.1| mRNA 3'-end processing factor [Haloquadratum walsbyi C23]
gi|339729177|emb|CCC40409.1| homolog to mRNA 3'-end processing factor [Haloquadratum walsbyi
C23]
Length = 332
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 124/312 (39%), Gaps = 53/312 (16%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL--VRMCLLV 185
G D GS K ++H H DH + G I S LT L VR
Sbjct: 18 GERIVCDGVPKGSSKQEVTTAVSHAHGDHLVD-----TAGEIVASELTVALASVRQSECK 72
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQC-YLHTGDFRAS-RLMQ 243
HP V L+ A H G+ + + C YL+TGD R S RL
Sbjct: 73 PEKITHP------------AVDLIPAGHIAGSRAVLLTDPETDCRYLYTGDCRLSDRLYL 120
Query: 244 SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIG 303
V+ +VL L+TTY +PKY+FPS E + + + L + +V++ Y++G
Sbjct: 121 DGFDPVD--ADVLILETTYGDPKYRFPSPEKTHDRI----REWLAQTMDDVVILFGYALG 174
Query: 304 ---KESVFLAISKALGVKIY-ANASRRRVLQ-----SFDWPELSGNLCTQGNDTLLHVLP 354
K V L + V I A A V++ SFD + ++ Q D + VLP
Sbjct: 175 RAQKLQVLLESTARSRVFITDAIAELNAVIESHHEISFDARRYTTDVTLQPGDAV--VLP 232
Query: 355 MSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYS 414
M + + ++ ++ A +GW ++ Q R + +G + S
Sbjct: 233 MQTTRLGWIESLIEATDAMTAGF-----SGWAIDDSFIYQ----RGVDKGFV------LS 277
Query: 415 EHSSFTELREFV 426
+H + EL E V
Sbjct: 278 DHCDYDELIELV 289
>gi|88602138|ref|YP_502316.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1]
gi|88187600|gb|ABD40597.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1]
Length = 629
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 36/201 (17%)
Query: 146 AYFLTHFHYDH--YGGLGKRWSH-GPIYCSPLTARLVRMCLL-----VNPS--------- 188
A LTH H DH Y L ++ + GP+Y +P T L M L VN
Sbjct: 234 AVVLTHAHLDHCAYIPLLYKYGYEGPVYSTPPTRDLAAMLQLDYLDVVNKEGKPIPYSSN 293
Query: 189 ----YI-HPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLH-TGD--FR 237
YI H + LN V D +K+T A H G+ + HF + DG + TGD +
Sbjct: 294 EVKEYIKHSIVLNYGCVTDIAPDIKLTFHNAGHILGSGIAHFHVGDGLYNVAFTGDLHYG 353
Query: 238 ASRLMQSYPLLVNH--RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
SRL + VNH R+ L++++TY + P++ D + + + L++ K +
Sbjct: 354 KSRLFNA---AVNHYPRLEALFMESTYGGAQDMQPNRADAEERLYGVFREVLERGGK--I 408
Query: 296 VVGAYSIGK-ESVFLAISKAL 315
++ A+++G+ + V LAI + +
Sbjct: 409 IIPAFAVGRSQEVMLAIEEGM 429
>gi|297619164|ref|YP_003707269.1| KH-domain/beta-lactamase-domain-containing protein [Methanococcus
voltae A3]
gi|297378141|gb|ADI36296.1| KH-domain/beta-lactamase-domain protein [Methanococcus voltae A3]
Length = 635
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 37/203 (18%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCSPLTARLVRMCLL------------ 184
SI+ A +TH H DH G GL + GP+YC+ T L M LL
Sbjct: 230 SIEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDL--MTLLQKDYIDIAEKEG 287
Query: 185 ---------VNPSYIHPLELN---TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYL- 231
V + H + L+ T + VK+TL A H G+A+ H + DG +
Sbjct: 288 KPVPYTSRDVKNAIKHTIPLDYGVTTDIAPAVKLTLHNAGHILGSAIAHCHIGDGLYNVA 347
Query: 232 HTGD--FRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
+TGD F ASRL++ P + R+ L +++TY P +++ ++++ +
Sbjct: 348 YTGDIKFEASRLLE--PAVCQFPRLETLIMESTYGGYDDVLPERDETEKELLKVISETIA 405
Query: 289 KQPKTLVVVGAYSIGKESVFLAI 311
K K V++ + IG+ + +
Sbjct: 406 KGGK--VILPVFGIGRAQELMLV 426
>gi|440469687|gb|ELQ38790.1| hypothetical protein OOU_Y34scaffold00528g82 [Magnaporthe oryzae
Y34]
gi|440488779|gb|ELQ68480.1| hypothetical protein OOW_P131scaffold00240g5 [Magnaporthe oryzae
P131]
Length = 676
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 36/163 (22%)
Query: 190 IHPLELNTEHVID-----GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS 244
+ P+ L+T I+ + VTLL+ANHC GA + F DG+ L+TG SR
Sbjct: 67 LKPIPLDTPTQIELAPGKSIGVTLLDANHCTGAVMFLFE-GDGKAVLYTGIKTLSR---- 121
Query: 245 YPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIG 303
+YLDT+ FPSK+ L ++ LK PK T+ A++ G
Sbjct: 122 -----------IYLDTSNTE-DIAFPSKDAGLKELLEK----LKSYPKDTIFHFKAWTFG 165
Query: 304 KESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGN 346
E V++A+SKAL I+ + + ++ +S L T+GN
Sbjct: 166 YEDVWIALSKALDSPIHVDDYKMQLYRS---------LVTKGN 199
>gi|84489102|ref|YP_447334.1| exonuclease [Methanosphaera stadtmanae DSM 3091]
gi|84372421|gb|ABC56691.1| predicted exonuclease [Methanosphaera stadtmanae DSM 3091]
Length = 635
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 29/198 (14%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMC----LLVNPSYIHP 192
+++ A +TH H DH G + + +G P YC+ T ++ + L ++ P
Sbjct: 230 NLQDLDAVIITHAHLDHTGFVPYLYHYGYDGPTYCTTPTRDMMTLLQQDHLDISHREDKP 289
Query: 193 LELNTEHVID------------------GVKVTLLEANHCPGAALIHFRLQDGQ-CYLHT 233
L N + V + +++TL +A H G+A+ H + DG+ +L+T
Sbjct: 290 LPFNIKDVKETINKTITLDYGQVTDISPDIRLTLHDAGHIVGSAMAHLNIGDGKHNFLYT 349
Query: 234 GDFR--ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
GDF+ SRL+ + P R+ + +++TY + P++ +V+ + ++K
Sbjct: 350 GDFKNEQSRLLGT-PKQHFARIESMVMESTYGGREDNTPTRNTAEKELVKAIYDTIQKGG 408
Query: 292 KTLVVVGAYSIGKESVFL 309
K L+ V A +E + +
Sbjct: 409 KILIPVFAVGRAQEIMIV 426
>gi|402582432|gb|EJW76378.1| hypothetical protein WUBG_12710 [Wuchereria bancrofti]
Length = 137
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 138 YGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV------RMCLLVNPSYIH 191
+G+ +FL+ H L W I CSP+TA+L+ R ++ +I
Sbjct: 21 FGTNPDVKYFFLSSAHSRQCRKLTSEWQRNRICCSPITAKLLSVISSRRKEYKISDKWIR 80
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY---LHTGDFRASRLMQSY 245
PL+LN H ++ +V L++ANH PG+ ++ + L+TG F LMQ +
Sbjct: 81 PLDLNVWHKMERFRVMLVDANHAPGSVMLIIESEHHNTLRRILYTGFF---ELMQDF 134
>gi|149021085|gb|EDL78692.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Rattus norvegicus]
Length = 257
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 253 VNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLA 310
+ +YLDTT+C+P+ Y+ PS+E+ L V+ L ++ + + PK +V + + G E +F
Sbjct: 13 IQSVYLDTTFCDPRFYQIPSREECLRGVLELVRSWITRSPKHVVWLNCKAAYGYEYLFTN 72
Query: 311 ISKALGVKIYANASRRRVLQSF-DWPELSGNLCTQGNDTL---LHVLPMSSLKFETLKDY 366
+S+ LGV+++ + L F + P++ +L T N + H ++ L
Sbjct: 73 LSEELGVQVHVDK-----LDMFKNMPDILHHLTTDRNTQIHACRHPKAEEYFQWNKLPCG 127
Query: 367 LKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ ++ +P+ + E ++ R + Y +S HSS++E+++F+
Sbjct: 128 MASKTKTVLHTISIKPSTMWFGERTRKTNVIV----RTGESSYRACFSFHSSYSEIKDFL 183
>gi|407774413|ref|ZP_11121711.1| beta-lactamase-like protein [Thalassospira profundimaris WP0211]
gi|407282455|gb|EKF08013.1| beta-lactamase-like protein [Thalassospira profundimaris WP0211]
Length = 362
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 130 PFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLLVNPS 188
P + F + +A F+TH H DH G G+ G PIYC+ +TAR L +
Sbjct: 36 PESDQGFDPAWLNKVNAVFITHDHIDHIGAAGEIVDAGLPIYCTEVTARS-----LPKGA 90
Query: 189 YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+ PL E +DGV VT H G +HF L G L++GDF
Sbjct: 91 NVIPLPPYGEIQVDGVTVTTGRTGHSFGGVWLHFELGGG--VLYSGDF 136
>gi|71657612|ref|XP_817319.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882502|gb|EAN95468.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 522
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 143/391 (36%), Gaps = 93/391 (23%)
Query: 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL------ 178
K+P P +D F Y + Y L+HFH DH GL W G I C +T L
Sbjct: 2 KVPRFPVYIDQF-YSEDNPDAVYLLSHFHTDHMKGLSHSWCAGLIICEAVTRALLIQKYG 60
Query: 179 ------------------VRMCLLVNPSYIHPLELNTEHVIDGVK--------------- 205
+RM + E V+D VK
Sbjct: 61 VCMEKCSVSLPLFQRTPFLRMVTTTSSKVAPDSAEEREFVLDTVKDNGSDENCGSNFGED 120
Query: 206 ----VTLLEANHCPGAALIHFRLQDGQCYLHTGDFR----ASRLMQSYPLLVNHRVNVLY 257
+ LL A H PG+ + G L+TGDF+ A R + P +H V+ +Y
Sbjct: 121 GMVMLYLLPAFHIPGSVMFFLETPFGNV-LYTGDFKYDEYARRRLD--PFFADHSVDHVY 177
Query: 258 LDTTY-------CNPKYKFPSKEDVLNYVV------------------RLTKNCLKKQPK 292
+D T+ +P + VL+ ++ R+ + L+K
Sbjct: 178 VDDTWLHLGIPEVSPSMRGNEGTRVLSKMLSETELEEAIEAVGRRMDWRVREFSLEKN-S 236
Query: 293 TLVVVGAYSI--------GKESVFLAISKALGVKIYANASRR---RVLQSFD--WPELSG 339
T + G Y + GKE + ++ LGV + + SR R+L SF+ E+
Sbjct: 237 TNPLCGPYVVRVYLHNQFGKEHIVQRLATRLGVPVVVDDSRYERIRLLASFNETTAEVHE 296
Query: 340 NLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIR 399
C + + + S + E + LK + A R G + V + L+R
Sbjct: 297 KFCLVADRFVTYANCKSFPRIEVVSS-LKEIAPEELRAAAERSGGTPHYGIVMSGWALLR 355
Query: 400 PLSRGN--ITIYGVPYSEHSSFTELREFVQV 428
G+ ++ +P + HS+ ++ +F+ +
Sbjct: 356 RRGGGDDEALVWEIPTTLHSTPQQIIDFIAL 386
>gi|154150928|ref|YP_001404546.1| beta-lactamase domain-containing protein [Methanoregula boonei 6A8]
gi|153999480|gb|ABS55903.1| beta-lactamase domain protein [Methanoregula boonei 6A8]
Length = 639
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 36/215 (16%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLL-----VNP---------- 187
A LTH H DH + + +G P+Y +P T L M L +N
Sbjct: 244 AVVLTHAHLDHCALIPLLYKYGYEGPVYSTPPTRDLSAMLQLDYLDVINKEDRKIPYSSN 303
Query: 188 ---SYI-HPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLH-TGDFRAS 239
+YI H + LN V D +K+T A H G+A+ HF + DG + TGDF S
Sbjct: 304 EVKTYIRHSITLNYGSVTDIAPDIKLTFHNAGHILGSAIAHFHIGDGLYNIAFTGDFNYS 363
Query: 240 RLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
+ P + R+ L++++TY P++ D + L + K V++
Sbjct: 364 KSRLFNPAINQFPRLEALFMESTYGGSNDFQPARSDAELKLYETINKVLSRGGK--VIIP 421
Query: 299 AYSIGK-ESVFLAISKALG------VKIYANASRR 326
A+++G+ + V LA+ + + VKIY + R
Sbjct: 422 AFAVGRSQEVMLALEEGMRLGKIPHVKIYLDGMIR 456
>gi|294055984|ref|YP_003549642.1| ATP-dependent DNA ligase I [Coraliomargarita akajimensis DSM 45221]
gi|293615317|gb|ADE55472.1| DNA ligase I, ATP-dependent Dnl1 [Coraliomargarita akajimensis DSM
45221]
Length = 323
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 10/185 (5%)
Query: 149 LTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVN-PSYIHPLELNTEHVIDGVKVT 207
++H H DH H C+P T L+R+ L + ++
Sbjct: 30 ISHAHGDHVA------RHESFLCTPATLDLIRVRHGERFAQRGSALPFGEWRELRTCRMR 83
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
A H G+A++ L+TGDF+ ++ + + + V V+VL ++TT+ P Y
Sbjct: 84 FWPAGHVLGSAMVEVESDRHGSLLYTGDFKLAQGLAAEAIQVPE-VDVLVMETTFGRPNY 142
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRR 327
+FPS E V ++ + L + V+ AYS+GK L + + +GV + + + +
Sbjct: 143 RFPSVETVRADLLCFCQQSLGA--GMIPVLLAYSLGKAQEVLMLLEGIGVPLMVHRTIEQ 200
Query: 328 VLQSF 332
+ Q +
Sbjct: 201 LNQVY 205
>gi|171185999|ref|YP_001794918.1| beta-lactamase domain-containing protein [Pyrobaculum neutrophilum
V24Sta]
gi|170935211|gb|ACB40472.1| beta-lactamase domain protein [Pyrobaculum neutrophilum V24Sta]
Length = 425
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 37/218 (16%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARL--------------------- 178
K +A FL+H H DH GGL + + P+Y +PLT L
Sbjct: 49 KDLTATFLSHAHLDHSGGLPSLYVSTRTPLYSTPLTMELSDLMYTDAIKLSGYYLPYTQE 108
Query: 179 -VR--MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
VR M V +Y P+E+ + V+ T A H PG+A+ ++ G+ + TGD
Sbjct: 109 EVRETMASAVPLTYGEPVEIGRDAVL-----TAYNAGHIPGSAIGVLEIE-GRVVVFTGD 162
Query: 236 FRA--SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
F + L++ L + +V+ ++ TY + + P +E + V+ K L +
Sbjct: 163 FNTVDTNLLRGADLYNLPKAPDVVIMEATYASADH--PPREKLEKEFVQAVKEVLDQGGT 220
Query: 293 TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
L+ A +E + + + IY + R++ Q
Sbjct: 221 VLIPSFALGRAQEIMLTLVKHGVNAPIYIDGLARQINQ 258
>gi|11498093|ref|NP_069318.1| mRNA 3'-end processing factor [Archaeoglobus fulgidus DSM 4304]
gi|2650146|gb|AAB90756.1| mRNA 3'-end processing factor, putative [Archaeoglobus fulgidus DSM
4304]
Length = 632
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 40/208 (19%)
Query: 141 IKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL----------VNP 187
+ A +TH H DH G L K GPIY +P T L+ + L NP
Sbjct: 228 LDALDAVVITHAHLDHCGLVPLLYKFGYRGPIYLTPPTRDLMVLLQLDFLEVAGREGTNP 287
Query: 188 SYI---------HPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYL-HTG 234
Y H + L+ V D V++T A H G+A+ HF + +G + TG
Sbjct: 288 PYSSNLIREALKHTITLDYGVVTDISPDVRLTFYNAGHILGSAIAHFHIGEGHYNIAFTG 347
Query: 235 DFRAS------RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
DF+ R ++P R+ L ++ TY P PS+++ ++ + L
Sbjct: 348 DFKFEKTRLFDRAATNFP-----RLEALVMEATYGGPNDFQPSRKEAEERLIEVINRTLD 402
Query: 289 KQPKTLVVVGAYSIGK-ESVFLAISKAL 315
+ K V++ +++G+ + V + + +A+
Sbjct: 403 RGGK--VLIPTFAVGRSQEVMIVLEEAM 428
>gi|256810348|ref|YP_003127717.1| KH-domain/beta-lactamase-domain-containing protein
[Methanocaldococcus fervens AG86]
gi|256793548|gb|ACV24217.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus fervens
AG86]
Length = 634
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 63/247 (25%)
Query: 116 VDRSCPFYKKIPGTPFTVD----------AFRYG-----SIKGCSAYFLTHFHYDHYG-- 158
V RSC Y + P T +D AF + SI+ A +TH H DH G
Sbjct: 191 VGRSC-LYVQTPDTRVLIDCGINVAFEDKAFPHFDAPEFSIEDLDAVIVTHAHLDHCGFV 249
Query: 159 -GLGKRWSHGPIYCS-------------------------PLTARLVRMCLLVNPSYIHP 192
GL + GP+YC+ P T++ ++ C+ + P
Sbjct: 250 PGLFRYGYDGPVYCTRPTRDLMTLLQKDYLEIAKKEGKEVPYTSKDIKTCV----KHTIP 305
Query: 193 LELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYL-HTGD--FRASRLMQ----S 244
++ T + +K+TL A H G+A+ H + DG L +TGD F SRL++
Sbjct: 306 IDYGVTTDISPTIKLTLHNAGHVLGSAIAHLHIGDGLYNLAYTGDIKFETSRLLEPAVCQ 365
Query: 245 YPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK 304
+P R+ L +++TY P +++ ++R+ +K K L+ V + +G+
Sbjct: 366 FP-----RLETLIIESTYGAYDDVLPERDEAERELLRVVSETTEKGGKVLIPV--FGVGR 418
Query: 305 ESVFLAI 311
+ +
Sbjct: 419 AQELMLV 425
>gi|375013030|ref|YP_004990018.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Owenweeksia hongkongensis DSM 17368]
gi|359348954|gb|AEV33373.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Owenweeksia hongkongensis DSM 17368]
Length = 341
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 91/189 (48%), Gaps = 18/189 (9%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+TH H DH R H + ++R+ L + + + +E I+GVK +
Sbjct: 30 LITHAHADH-----SRSGHQSYLAHKDSETVMRLRLGADIN-LETVEFGEVKTINGVKFS 83
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSY---PLLVNHRVNVLYLDTTYCN 264
A H PG+A I + G+ ++ +GD++ + S P+ H + ++T+
Sbjct: 84 FHPAGHIPGSAQIRAEYK-GEIWVVSGDYKVQKDGISTPFEPVACQHFIT----ESTFGL 138
Query: 265 PKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK-ESVFLAISKALGVKIYANA 323
P YK+ + V++ + + ++C K+ + + V+GAYS+GK + + + + +G +I+ +
Sbjct: 139 PIYKWEEQPVVMDEINQWWQSC--KEKRKVAVIGAYSLGKAQRIINHVDQGIG-RIFTHG 195
Query: 324 SRRRVLQSF 332
+ Q+
Sbjct: 196 AVENTNQAL 204
>gi|108757601|ref|YP_634052.1| hypothetical protein MXAN_5915 [Myxococcus xanthus DK 1622]
gi|108461481|gb|ABF86666.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 325
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 125/316 (39%), Gaps = 61/316 (19%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--RMCLLV 185
GTP ++DA R + C F++H H DH H + T R + R+ +
Sbjct: 14 GTPLSLDAKRKSPL--C---FVSHGHSDHIA------RHESTIATAATLRFMTHRLGPVR 62
Query: 186 NPSYI---HPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLM 242
P + P EL + + LL A H G+A + DG+ ++TGD + +
Sbjct: 63 EPREVPFRQPFELGP------LVLELLPAGHILGSAQLRVTRPDGRRIVYTGDLNVAPSL 116
Query: 243 QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302
+ V + L +++T+ +P+Y+FP + +VL V + L++ + V+ Y +
Sbjct: 117 TAEATEVAE-CDTLVIESTFGHPRYRFPPRPEVLGQVETWLRMQLER--GAVPVLLGYPL 173
Query: 303 GKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNL----CTQGNDTLLHVLPMSSL 358
GK + G + A++S V Q + EL + C G V P L
Sbjct: 174 GKSQEAMKHLAGRGFPLVAHSSIYEVAQLYA--ELGVPIENLRCYDGK-----VEPGEVL 226
Query: 359 KF---ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV---- 411
F L P + AVL TGW + RG + YG
Sbjct: 227 FFPPHHARGGALAPLWPRATAVL----TGWA--------------VDRGAVRRYGADVAF 268
Query: 412 PYSEHSSFTELREFVQ 427
P S+H+ F L + +
Sbjct: 269 PLSDHADFPGLVSYAK 284
>gi|241952418|ref|XP_002418931.1| DNA cross-link repair protein, putative [Candida dubliniensis CD36]
gi|223642270|emb|CAX44239.1| DNA cross-link repair protein, putative [Candida dubliniensis CD36]
Length = 569
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 26/137 (18%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLE----------L 195
Y LTH H DH GL G +YCS LT + L ++ YIH
Sbjct: 28 VYLLTHCHQDHLQGLLNNSFCGRVYCSALT----KSTLELDTRYIHVSRFFKVKEYNETF 83
Query: 196 NTEHVIDGVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFRA-----SRLMQS---YP 246
E ++ V +T++ + HCPG+++ F L+ + L TGD RA S L+++ +P
Sbjct: 84 AVETLLGKVTITMIPSYHCPGSSM--FLLESSTKSVLITGDVRAESWWTSSLIKNPHLFP 141
Query: 247 LLVNHR-VNVLYLDTTY 262
+ R ++ LYLDTT+
Sbjct: 142 YITGLRTLDQLYLDTTF 158
>gi|159904583|ref|YP_001548245.1| beta-lactamase domain-containing protein [Methanococcus maripaludis
C6]
gi|159886076|gb|ABX01013.1| beta-lactamase domain protein [Methanococcus maripaludis C6]
Length = 635
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCS------------------------ 172
SI+ A +TH H DH G GL + GP+YC+
Sbjct: 230 SIEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGKN 289
Query: 173 -PLTARLVRMCLLVNPSYIHPLELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY 230
P +++ ++ C+ + PL+ T + +K+TL A H G+A+ H + DG
Sbjct: 290 VPYSSKDIKNCI----KHTIPLDYGVTTDIAPAIKLTLHNAGHILGSAIAHCHVGDGLYN 345
Query: 231 L-HTGD--FRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
+ +TGD F ASRL++ P + R+ L +++TY P +++ +R+
Sbjct: 346 VAYTGDIKFEASRLLE--PAVCQFPRLETLIIESTYGGYDDVLPERDETEKEFLRVIAET 403
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAI 311
+ ++ K ++ V + IG+ + +
Sbjct: 404 IARKGKAIIPV--FGIGRAQELMLV 426
>gi|119719226|ref|YP_919721.1| beta-lactamase domain-containing protein [Thermofilum pendens Hrk
5]
gi|119524346|gb|ABL77718.1| beta-lactamase domain protein [Thermofilum pendens Hrk 5]
Length = 639
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 30/199 (15%)
Query: 141 IKGCSAYFLTHFHYDHYGGLGKRWSH---GPIYCSPLTARLVRMCL-------------- 183
++ A +TH H DH G L + + GP+Y + T L ++
Sbjct: 230 LESLDAVVITHAHLDHVGALPVLFKYGYKGPVYMTEPTLHLSKLLFEDYIKVAQREGKNE 289
Query: 184 LVNPSYIHPLELNT--------EHVIDGVKVTLLEANHCPGAALIHFRLQDGQC-YLHTG 234
L + ++ L LNT + +++T A H G+A++H + +G ++TG
Sbjct: 290 LYSMRDVNSLLLNTYTLSYGEVTDIAPEIRLTFYRAGHILGSAMVHLHIGEGLINIVYTG 349
Query: 235 DFRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
D + +R M P R VL +++TY + PS++D + ++ +++ K
Sbjct: 350 DMKYARTMLLDPAYNKFPRAEVLIIESTYGSKSDVLPSEDDAKLELAKIVLETIER--KG 407
Query: 294 LVVVGAYSIGK-ESVFLAI 311
+V++ ++G+ + V LA+
Sbjct: 408 VVLIPVLAVGRAQEVLLAL 426
>gi|150403634|ref|YP_001330928.1| beta-lactamase domain-containing protein [Methanococcus maripaludis
C7]
gi|150034664|gb|ABR66777.1| beta-lactamase domain protein [Methanococcus maripaludis C7]
Length = 635
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 47/208 (22%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCS------------------------ 172
SI+ A +TH H DH G GL + GP+YC+
Sbjct: 230 SIEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGKN 289
Query: 173 -PLTARLVRMCLLVNPSYIHPLELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY 230
P +++ ++ C+ + PL+ T + +K+TL A H G+A+ H + DG
Sbjct: 290 VPYSSKDIKNCI----KHTIPLDYGVTTDIAPAIKLTLHNAGHILGSAIAHCHVGDGLYN 345
Query: 231 L-HTGD--FRASRLMQ----SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
+ +TGD F ASRL++ +P R+ L +++TY P +++ +R+
Sbjct: 346 VAYTGDIKFEASRLLEPAVCQFP-----RLETLIIESTYGGYDDVLPERDETEKEFLRVI 400
Query: 284 KNCLKKQPKTLVVVGAYSIGKESVFLAI 311
+ ++ K ++ V + IG+ + +
Sbjct: 401 AETIARKGKAIIPV--FGIGRAQELMLV 426
>gi|149021086|gb|EDL78693.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_b [Rattus norvegicus]
Length = 552
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 253 VNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLA 310
+ +YLDTT+C+P+ Y+ PS+E+ L V+ L ++ + + PK +V + + G E +F
Sbjct: 13 IQSVYLDTTFCDPRFYQIPSREECLRGVLELVRSWITRSPKHVVWLNCKAAYGYEYLFTN 72
Query: 311 ISKALGVKIYANASRRRVLQSF-DWPELSGNLCTQGNDTL---LHVLPMSSLKFETLKDY 366
+S+ LGV+++ + L F + P++ +L T N + H ++ L
Sbjct: 73 LSEELGVQVHVDK-----LDMFKNMPDILHHLTTDRNTQIHACRHPKAEEYFQWNKLPCG 127
Query: 367 LKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ ++ +P+ + E ++ R + Y +S HSS++E+++F+
Sbjct: 128 MASKTKTVLHTISIKPSTMWFGERTRKTNVIV----RTGESSYRACFSFHSSYSEIKDFL 183
>gi|374326702|ref|YP_005084902.1| putative mRNA 3-end processing factor [Pyrobaculum sp. 1860]
gi|356641971|gb|AET32650.1| putative mRNA 3-end processing factor [Pyrobaculum sp. 1860]
Length = 324
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 37/222 (16%)
Query: 204 VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYC 263
V++ +LEA H G+ +++ DG L TGDF S + + +++VL ++ TY
Sbjct: 97 VQIAVLEAGHILGS-VMYMAEVDGLQILITGDFNTSGSIITDGAEPFEKLDVLVMEATYG 155
Query: 264 NPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANA 323
+P Y FP++ +V N ++ + + + + V + AY +GK ++ G + A++
Sbjct: 156 DPAYVFPNRAEVYNELMDVVERLVGEGG---VAISAYPLGKAQ---EVAALFGRRAGAHS 209
Query: 324 SRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPT 383
S R ++ P G+ T + ++P L P
Sbjct: 210 SVARYNKALGIP--------TGSVTDVLIVPN----------------------LRMAPP 239
Query: 384 GWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREF 425
G+ E G +D + ++G+P S+HS F L EF
Sbjct: 240 GYFKVEVSGWYVDEATRKNAEAAGVHGIPLSDHSDFPSLVEF 281
>gi|338532986|ref|YP_004666320.1| hypothetical protein LILAB_16695 [Myxococcus fulvus HW-1]
gi|337259082|gb|AEI65242.1| hypothetical protein LILAB_16695 [Myxococcus fulvus HW-1]
Length = 316
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 123/311 (39%), Gaps = 61/311 (19%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--RMCLLV 185
GTP ++DA R + C F++H H DH H + T R + R+ +
Sbjct: 5 GTPLSLDAKRKSPL--C---FVSHGHSDHIA------RHESTIATAATLRFMAHRLGPVR 53
Query: 186 NPSYI---HPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLM 242
P + P EL + + LL A H G+A + DG+ ++TGD + +
Sbjct: 54 EPREVPFRQPFELGP------LVLELLPAGHILGSAQLRVTRPDGRRIVYTGDLNVAPSL 107
Query: 243 QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302
+ V + L +++T+ +P+Y+FP + +VL V + L++ + V+ Y +
Sbjct: 108 TAEATEVAE-CDTLVIESTFGHPRYRFPPRPEVLGQVEAWLRMQLER--GAVPVLLGYPL 164
Query: 303 GKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNL----CTQGNDTLLHVLPMSSL 358
GK + G + A++S V Q + EL + C G V P L
Sbjct: 165 GKSQEAMKHLAGRGFPLVAHSSIYEVAQLYA--ELGVPIENLRCYDGK-----VEPGEVL 217
Query: 359 KF---ETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGV---- 411
F L P + AVL TGW + RG + YG
Sbjct: 218 FFPPHHARGGALAPLWPRATAVL----TGWA--------------VDRGAVRRYGADVAF 259
Query: 412 PYSEHSSFTEL 422
P S+H+ F L
Sbjct: 260 PLSDHADFPGL 270
>gi|20094663|ref|NP_614510.1| metal-dependent RNase [Methanopyrus kandleri AV19]
gi|19887824|gb|AAM02440.1| Predicted metal-dependent RNase, consists of a
metallo-beta-lactamase domain and an RNA-binding KH
domain [Methanopyrus kandleri AV19]
Length = 652
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 46/216 (21%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG------PIYCSPLTARLVRMCLL 184
F V FR + A +TH H DH G L + H P+YC+P T L+ + L
Sbjct: 238 FNVPEFRMDDL---DAIVITHAHLDHCGFLPYFYRHKVIESRVPVYCTPPTRDLMYLLLT 294
Query: 185 VNPSYIHPLELNTEH-------------------------VIDGVKVTLLEANHCPGAAL 219
YI LE + + + +T A H G+A
Sbjct: 295 ---DYIKVLEKRGQEPPYTEKDVKKVIKRTITIDYREPTDITPDMSITFYNAGHILGSAS 351
Query: 220 IHFRLQD-GQCYLHTGDFR--ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVL 276
+H LQD G +++TGD SRL++ RV+ + ++ TY + ++ KE+
Sbjct: 352 VHVFLQDKGHNFVYTGDINPTPSRLLEGADNRFK-RVDSMVVEATYGDSRHGSRRKEE-- 408
Query: 277 NYVVRLTKNCLKKQPKTLVVVGAYSIGK-ESVFLAI 311
N ++ ++ LKK K V++ ++++G+ + V L +
Sbjct: 409 NRFRKIVRDTLKKGGK--VLIPSFAVGRAQEVMLVL 442
>gi|357386163|ref|YP_004900887.1| mRNA 3-end processing factor [Pelagibacterium halotolerans B2]
gi|351594800|gb|AEQ53137.1| mRNA 3-end processing factor [Pelagibacterium halotolerans B2]
Length = 331
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 18/186 (9%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVN-PSYIHPLELNTEHVIDGVKV 206
+TH H DH R HG + +P T +++ + + ID V +
Sbjct: 28 IITHGHADH-----ARSGHGKVLATPDTIAIMKTRYGADCAGSFQAASFGEKVRIDDVTI 82
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFR--ASRLMQSYPLLVNHRVNVLYLDTTYCN 264
TL A H G+A + QDGQ + TGD++ + Q + L+ ++L + T+
Sbjct: 83 TLYPAGHILGSAQVLIE-QDGQRVVVTGDYKRLPEKTAQPFELVA---CDLLVTEATFGL 138
Query: 265 PKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG--VKIYAN 322
P ++ P + + RL K+ L P+ V+GAY++GK +A+ + G IY +
Sbjct: 139 PVFQHPHPTE---EIARLFKS-LAAHPERAHVIGAYALGKAQRVIALLRDGGYDAPIYLH 194
Query: 323 ASRRRV 328
+ +R+
Sbjct: 195 GAMQRL 200
>gi|448358228|ref|ZP_21546913.1| beta-lactamase [Natrialba chahannaoensis JCM 10990]
gi|445646799|gb|ELY99783.1| beta-lactamase [Natrialba chahannaoensis JCM 10990]
Length = 555
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 81/201 (40%), Gaps = 46/201 (22%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSH-GPIYCSPLTARLVRMCL--------LVNPS----YIH 191
+A LTH H DHY LGK H PIY SP TA ++ L L N + +
Sbjct: 52 NAILLTHAHIDHYRTLGKNVRHSAPIYTSPATAAVLEQSLPEAQKDNDLGNVTAALEAVE 111
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDG--------------QCYLHTGDFR 237
P++ ++D + V + A H PG A R +DG Q L TGDF
Sbjct: 112 PID-GWVSLLDSLDVRPVPAGHTPGGAGFLLRFRDGSGSGATDSTLQPTDQHILVTGDF- 169
Query: 238 ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
++ YP L R +D + N P+ +D + + + L++
Sbjct: 170 TTQPCAGYPPLA--RSYPFDIDAVFLN----VPTSDDTVETRNKAVRTILER-------- 215
Query: 298 GAYSIGKESVFLAISKALGVK 318
AY G V LA S GV+
Sbjct: 216 -AY--GGSRVVLATSSLTGVQ 233
>gi|449517473|ref|XP_004165770.1| PREDICTED: uncharacterized LOC101217143, partial [Cucumis sativus]
Length = 540
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 213 HCPGAALIHFRLQDGQCYLHTGDFRAS-RLMQSYPLLVNHR--------VNVLYLDTTYC 263
H GA + F G LHTGD R + +Q+ P + +++++LD T+
Sbjct: 10 HGLGAVMFLFEGYFGNV-LHTGDCRLTPECLQNLPEKYRGKSGKEPRCKLDLIFLDCTFG 68
Query: 264 NPKYKFPSKEDVLNYVVRLTKNCLKKQPKT-LVVVGAYSIGKESVFLAISKALGVKIYAN 322
+FPS+ ++ ++ NC+ K P LV + +G+E + +S+ G KI+A+
Sbjct: 69 RFFQQFPSRHSSIHQII----NCIWKHPDAPLVYLICNLLGQEDILQQVSQTFGSKIFAD 124
Query: 323 ASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQY-AAVLAFR 381
S++ ++ + ++ ++ TQ + H+L +T + L + + L R
Sbjct: 125 ESKKAGYKALEL--INPDILTQDPSSRFHLLDGFPKLCQTARTLLADAQTNFLSEPLVIR 182
Query: 382 P-TGWTYSETVG----NQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
P T W E V ++ +I + I+ V YS HSS EL +Q+
Sbjct: 183 PSTQWYVREEVSEIWNSRKQIISEAIKDQHGIWHVCYSMHSSKEELEWALQI 234
>gi|432331211|ref|YP_007249354.1| universal archaeal KH-domain/beta-lactamase-domain protein
[Methanoregula formicicum SMSP]
gi|432137920|gb|AGB02847.1| universal archaeal KH-domain/beta-lactamase-domain protein
[Methanoregula formicicum SMSP]
Length = 636
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 36/215 (16%)
Query: 146 AYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL-----VNP---------- 187
A LTH H DH L K GP+Y +P T L M L +N
Sbjct: 241 AVVLTHAHLDHCALVPLLYKYGYEGPVYSTPPTRDLSAMLQLDYLDVINKEGRKVPYSSN 300
Query: 188 ---SYI-HPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLH-TGDFRAS 239
+YI H + LN V D +K+T A H G+A+ HF L DG + TGDF +
Sbjct: 301 EVKTYIKHSVTLNYGSVTDIAPDIKLTFHNAGHILGSAIAHFHLGDGMYNIAFTGDFNYA 360
Query: 240 RLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
+ P + R+ L++++TY ++ D + L++ K V++
Sbjct: 361 KSRLFNPAINQFPRLEALFMESTYGGSNDFQQARADCEGMLYDTINRVLQRGGK--VIIP 418
Query: 299 AYSIGK-ESVFLAISKAL------GVKIYANASRR 326
A+S+G+ + V LA+ + + VKIY + R
Sbjct: 419 AFSVGRSQEVMLALEEGMRTNKIPKVKIYLDGMIR 453
>gi|126465835|ref|YP_001040944.1| beta-lactamase domain-containing protein [Staphylothermus marinus
F1]
gi|126014658|gb|ABN70036.1| beta-lactamase domain protein [Staphylothermus marinus F1]
Length = 652
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 57/240 (23%)
Query: 117 DRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSP 173
DR+ PF +D ++ A +TH H DH G L K GP+Y +
Sbjct: 227 DRAYPF--------IDIDQL---NLSELDAVIVTHAHLDHIGLVPLLYKYGYRGPLYVTK 275
Query: 174 LTARLVRMCLLVN---------------------PSYIHPLELNTEHVID---GVKVTLL 209
T L M +++ + +H + L V D +KVT+
Sbjct: 276 PTREL--MVIMIKDLIEVTQREGKYLPYSEKDLMTTILHTIPLEYGDVTDVAPDIKVTMY 333
Query: 210 EANHCPGAALIHFRLQDG-QCYLHTGDFR--ASRLMQ----SYPLLVNHRVNVLYLDTTY 262
A H G+A++H + G ++TGDF+ +RL+ +P RV L +++TY
Sbjct: 334 NAGHILGSAIVHLHIGMGLHNIVYTGDFKYAPTRLLNRAEDKFP-----RVETLIMESTY 388
Query: 263 CNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFL---AISKALGVKI 319
+ + S+ + ++R+ K ++++ L+ V A G+E + + AISK L K+
Sbjct: 389 GATRQQ--SRREAEAELIRIVKKTIERKGIVLIPVFAVGRGQEIMLVLNDAISKGLIPKV 446
>gi|383640738|ref|ZP_09953144.1| RNA procession exonuclease-like protein [Sphingomonas elodea ATCC
31461]
Length = 331
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 13/175 (7%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI 201
K + +TH H DH G HG ++ +P T L M P P++ +
Sbjct: 27 KPVARAIVTHGHADHARG-----GHGEVWATPGT--LAIMAARYGPQNGRPVDYGERVTL 79
Query: 202 DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTT 261
++V + A H G+A + G+ + +GD++ P + +V + T
Sbjct: 80 GPIEVGFVPAGHVLGSAQVVLD-HAGERIVVSGDYKRRPDPTCTPFQ-PVQCDVFITEAT 137
Query: 262 YCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG 316
+ P ++ P D ++ ++ L+ +P+ V+VGAY++GK +A + +G
Sbjct: 138 FGLPVFRHPETTDEIDKLL----TALRTEPERCVLVGAYALGKAQRVIAELRGMG 188
>gi|338721599|ref|XP_003364407.1| PREDICTED: protein artemis isoform 2 [Equus caballus]
Length = 578
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
Query: 231 LHTGDFRASRLMQSYPLLVN-----HRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR ++ + L++ + +YLDTT+C+PK Y+ PS+E+ L+ +V L +
Sbjct: 17 LYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLSGIVELVR 76
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYAN 322
+ + + P +V + + G E +F +S+ GV+++ +
Sbjct: 77 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVD 115
>gi|340623726|ref|YP_004742179.1| beta-lactamase-like protein [Methanococcus maripaludis X1]
gi|339903994|gb|AEK19436.1| beta-lactamase-like protein [Methanococcus maripaludis X1]
Length = 635
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 47/208 (22%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCS------------------------ 172
SI+ A +TH H DH G GL + GP+YC+
Sbjct: 230 SIEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGKN 289
Query: 173 -PLTARLVRMCLLVNPSYIHPLELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY 230
P +++ ++ C+ + PL+ T + +K+T+ A H G+A+ H + DG
Sbjct: 290 VPYSSKDIKNCI----KHTIPLDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHVGDGLYN 345
Query: 231 L-HTGD--FRASRLMQ----SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
+ +TGD F ASRL++ +P R+ L +++TY P +++ +R+
Sbjct: 346 VAYTGDIKFEASRLLEPAVCQFP-----RLETLIIESTYGGYDDVLPERDETEKEFLRVI 400
Query: 284 KNCLKKQPKTLVVVGAYSIGKESVFLAI 311
+ ++ K ++ V + IG+ + +
Sbjct: 401 AETIARKGKAIIPV--FGIGRAQELMLV 426
>gi|45358257|ref|NP_987814.1| beta-lactamase-like protein [Methanococcus maripaludis S2]
gi|44921014|emb|CAF30250.1| Beta-lactamase-like:KH domain [Methanococcus maripaludis S2]
Length = 635
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCS------------------------ 172
SI+ A +TH H DH G GL + GP+YC+
Sbjct: 230 SIEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGKN 289
Query: 173 -PLTARLVRMCLLVNPSYIHPLELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY 230
P +++ ++ C+ + PL+ T + +K+T+ A H G+A+ H + DG
Sbjct: 290 VPYSSKDIKNCI----KHTIPLDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHVGDGLYN 345
Query: 231 L-HTGD--FRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
+ +TGD F ASRL++ P + R+ L +++TY P +++ +R+
Sbjct: 346 VAYTGDIKFEASRLLE--PAVCQFPRLETLIIESTYGGYDDVLPERDETEKEFLRVIAET 403
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAI 311
+ ++ K ++ V + IG+ + +
Sbjct: 404 IARKGKAIIPV--FGIGRAQELMLV 426
>gi|393770814|ref|ZP_10359291.1| hypothetical protein WSK_0252 [Novosphingobium sp. Rr 2-17]
gi|392723712|gb|EIZ81100.1| hypothetical protein WSK_0252 [Novosphingobium sp. Rr 2-17]
Length = 336
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI 201
+ S +TH H DH G HG + +P T ++++ + + +
Sbjct: 30 RPVSRALVTHGHADHARG-----GHGETFATPETLAIMKLRYATDEGAVSVPYGERMALA 84
Query: 202 DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTT 261
GV T + A H G+A I G+ + TGDF+ R + P +VL + T
Sbjct: 85 GGVHATWIPAGHVLGSAQILLE-HAGERVIVTGDFK-RRPDPTCPPFEVTPCDVLITEAT 142
Query: 262 YCNPKYKFPSKE-DVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG 316
+ P ++ P E +V + LT N P+ V+VGAY++GK +A + G
Sbjct: 143 FGLPVFRHPPVEQEVAKLLAALTAN-----PERCVLVGAYALGKAQRLIAEVRRAG 193
>gi|327311459|ref|YP_004338356.1| beta-lactamase domain-containing protein [Thermoproteus uzoniensis
768-20]
gi|326947938|gb|AEA13044.1| beta-lactamase domain protein [Thermoproteus uzoniensis 768-20]
Length = 635
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 29/193 (15%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLL------------------ 184
A L+H H DH G L + +G P+Y + T L + L
Sbjct: 228 AVVLSHAHMDHVGCLPYLYKYGYRGPVYMTDPTKYLTYILLTDYVELKEREGQIPPYTKS 287
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFRAS 239
+ H + L+ E V D +K+TL +A H G+AL+H + +G+ L+TGDF+
Sbjct: 288 DIETLMYHIITLDYEEVTDIAPDIKLTLYDAGHEIGSALVHLHIGNGRYNILYTGDFKFG 347
Query: 240 RL-MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
R + + + RV +L +++TY P + + N +V+ ++ + K V++
Sbjct: 348 RTNLLNKAVNKFKRVEMLIMESTYGGRDDVQPPRVEAENTLVKAITETIENRGK--VLIP 405
Query: 299 AYSIGKESVFLAI 311
A+S G+ L I
Sbjct: 406 AFSTGRAQEILYI 418
>gi|41614872|ref|NP_963370.1| hypothetical protein NEQ076 [Nanoarchaeum equitans Kin4-M]
gi|40068596|gb|AAR38931.1| NEQ076 [Nanoarchaeum equitans Kin4-M]
Length = 635
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 28/197 (14%)
Query: 141 IKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL-----VNPSYI-- 190
+K A +TH H DH G L K GP+Y +P T + + LL N + +
Sbjct: 242 VKELDAVVITHAHLDHVGFVPFLYKMGYKGPVYLTPPTLDIATLSLLDYLRIANENNVKL 301
Query: 191 -----------HPLEL---NTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQC-YLHTGD 235
H + + T + VK+T A H G+AL H + +G L+TGD
Sbjct: 302 FSGDDIRNFVKHSITIEYGQTTDIASDVKLTFYNAGHILGSALAHLNIANGYSNVLYTGD 361
Query: 236 FRAS-RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTL 294
++ + + +VN+ ++TY + +K +E+V + K +K++ K L
Sbjct: 362 YKVKPTFLFDGAQIPQAKVNIAITESTYGDTYHK--PREEVEKEFLSFVKEVIKRKGKLL 419
Query: 295 VVVGAYSIGKESVFLAI 311
+ V +E ++L +
Sbjct: 420 IPVLGVGRAQEILYLLV 436
>gi|410290016|gb|JAA23608.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 577
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ Y + +YLDT C+P+ Y+ PS+E+ L+ V+ L +
Sbjct: 17 LYTGDFRLVQGEAARMELLYSRGRVKDIQSVYLDTMLCDPRFYQIPSREECLSGVLELVQ 76
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 77 SWITRSLYRVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 131
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 132 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 186
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 187 NVIVRTGESSYRACFSFHSSYSEIKDFL 214
>gi|320100463|ref|YP_004176055.1| RNA procession exonuclease-like protein [Desulfurococcus mucosus
DSM 2162]
gi|319752815|gb|ADV64573.1| RNA procession exonuclease-like protein [Desulfurococcus mucosus
DSM 2162]
Length = 359
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 51/298 (17%)
Query: 149 LTHFHYDHYGGLGK--RWSHGPIYCSPLTARLVRMCLLVNPSYI-------HPLELNTEH 199
+TH H DH GL + R+S I + +T LV V + P+ LN
Sbjct: 41 VTHAHIDHLKGLEESIRFSK-TIVGTAVTLDLVEALNYVGRDLLPYYRLKRKPIGLNECM 99
Query: 200 VIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLD 259
I+G ++ LL A+H PG+A ++ +G +TGDF+ +V ++ L ++
Sbjct: 100 SIEGDRMCLLPASHIPGSAQVYVE-HEGFKLGYTGDFKLGE-----GTVVMKGLDALVIE 153
Query: 260 TTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKA----- 314
TY NPK++ P K+ V + L + L + + + + G + +E++ + +
Sbjct: 154 ATYGNPKHRRPFKDVVPEMLAYLVEEGLARF-RRVYIYGYHGKLQEAMLILRERGVEAPF 212
Query: 315 -LGVKIYANASRRRVLQSFDW----PELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKP 369
L KI+ NA+R F E +G+ +G H M++ ++ L
Sbjct: 213 VLPRKIF-NATRLLEKHGFKIGNYVSEETGSSMGEGVVVFKH---MNTAEYRRLD----- 263
Query: 370 YGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
G VL +GW ++E P R + Y + S+H+ F +L ++V+
Sbjct: 264 -GGSLHIVL----SGWEFNE----------PFRRVDDYTYLIALSDHADFDDLVKYVE 306
>gi|291570139|dbj|BAI92411.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 513
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 140 SIKGCSAYFL--THFHYDHYGGL---GKRWSHGPIYCSPLTARLV------RMCLLVNPS 188
S +GC A + +H H DH GL + PIY S +T++L+ ++ P
Sbjct: 21 SSEGCVADLVICSHAHADHVRGLLALHESCPDLPIYASDVTSQLLPLNWPEQLSSGQIPQ 80
Query: 189 YIHPLELNTE-HVIDGVKVTLLEANHCPGAALIHFRLQDGQ---CYLHTGDF--RASRLM 242
+ PL L TE + +G+ +TL A H PGA + + +TGDF SRL+
Sbjct: 81 FCQPLPLRTEVRLKEGLSITLFPAGHLPGATCMLLKYNAPHRTYKLFYTGDFFLSNSRLV 140
Query: 243 QSYPL--LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
+ PL L R +VL L+ +Y +Y P + + N + + ++ A
Sbjct: 141 EGLPLGELRGLRPDVLILEGSYGTARY--PHRRQLENQLAERIYRAIASGYSVIIPTPAL 198
Query: 301 SIGKESVFL 309
+G+E + L
Sbjct: 199 GLGQELLML 207
>gi|427728695|ref|YP_007074932.1| exonuclease [Nostoc sp. PCC 7524]
gi|427364614|gb|AFY47335.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Nostoc sp. PCC 7524]
Length = 551
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 148 FLTHFHYDHYGGL---GKRWSHGPIYCSPLTARLVRMCLLVN-----PSYIHPLELNTE- 198
+TH H DH GL + + H PIY S +T++L+ + L P + H L L +
Sbjct: 73 LVTHAHPDHARGLLSLHQAFPHLPIYGSEVTSKLLPLNWLEQDPQTIPQFCHALPLRSPI 132
Query: 199 HVIDGVKVTLLEANHCPGAALIHFRLQDGQ---CYLHTGDF--RASRLMQSYPL--LVNH 251
+ DG+ V + A H PGA I Q L+TGDF SRL++ L L
Sbjct: 133 ELDDGLVVEIFPAGHLPGAVAILLTYTTEQRIYKLLYTGDFFLSNSRLVEGLRLEELRGL 192
Query: 252 RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFL 309
+NVL ++ TY ++ P + + N + + L+ A +G+E + L
Sbjct: 193 DLNVLIIEGTYGTSRH--PHRRNQENQLAERINRAIADGCSVLIPTPALGLGQELLML 248
>gi|409991436|ref|ZP_11274698.1| beta-lactamase-like protein [Arthrospira platensis str. Paraca]
gi|409937710|gb|EKN79112.1| beta-lactamase-like protein [Arthrospira platensis str. Paraca]
Length = 536
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 140 SIKGCSAYFL--THFHYDHYGGL---GKRWSHGPIYCSPLTARLV------RMCLLVNPS 188
S +GC A + +H H DH GL + PIY S +T++L+ ++ P
Sbjct: 44 SSEGCVADLVICSHAHADHVRGLLALHESCPDLPIYASDVTSQLLPLNWPEQLSSGQIPQ 103
Query: 189 YIHPLELNTE-HVIDGVKVTLLEANHCPGAALIHFRLQDGQ---CYLHTGDF--RASRLM 242
+ PL L TE + +G+ +TL A H PGA + + +TGDF SRL+
Sbjct: 104 FCQPLPLRTEVRLKEGLSITLFPAGHLPGATCMLLKYNAPHRTYKLFYTGDFFLSNSRLV 163
Query: 243 QSYPL--LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
+ PL L R +VL L+ +Y +Y P + + N + + ++ A
Sbjct: 164 EGLPLGELRGLRPDVLILEGSYGTARY--PHRRQLENQLAERIYRAIASGYSVIIPTPAL 221
Query: 301 SIGKESVFL 309
+G+E + L
Sbjct: 222 GLGQELLML 230
>gi|393720788|ref|ZP_10340715.1| RNA procession exonuclease-like protein [Sphingomonas echinoides
ATCC 14820]
Length = 332
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 15/191 (7%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEH 199
S + +TH H DH R HG ++ +P T L M P HP+
Sbjct: 26 SARPSPMALVTHGHADH-----ARGGHGAVWATPET--LAIMETRYGPQAGHPIAYGQSQ 78
Query: 200 VIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLD 259
V T + A H G+A I + G+ + +GD++ R + +V +
Sbjct: 79 SFGDVTATFVPAGHVLGSAQILLEYR-GERIVVSGDYK-RRADPTCAPFEPVPCDVFITE 136
Query: 260 TTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG--V 317
T+ P ++ P D ++ +LT + L P V+VGAY++GK +A +A G
Sbjct: 137 ATFGLPVFRHPDTGDEID---KLT-SALHANPTRCVLVGAYALGKAQRVIAELRARGHDA 192
Query: 318 KIYANASRRRV 328
IY + + R+
Sbjct: 193 PIYIHGALERL 203
>gi|156937397|ref|YP_001435193.1| beta-lactamase domain-containing protein [Ignicoccus hospitalis
KIN4/I]
gi|156566381|gb|ABU81786.1| beta-lactamase domain protein [Ignicoccus hospitalis KIN4/I]
Length = 428
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 138 YGSIKGCSAYFLTHFHYDHYGGLGKRWS--HGPIYCSPLTARLVRMC----LLVNPSYIH 191
Y S K A L+H H DH G L +S P Y + LT L + L ++ Y
Sbjct: 47 YVSPKDVGAVVLSHAHLDHSGALPMLYSAIRRPAYMTKLTKELTAILINDFLKLSGYYAT 106
Query: 192 PLELNTEHVIDGVK-----------------VTLLEANHCPGAALIHFRLQDGQCYLHTG 234
E + ++ V+ +T +A H PG+A++ L G L+TG
Sbjct: 107 YGETEVKEFLESVRTVDYRRTVEIPEAGGTLLTFYDAGHIPGSAMVKLELPSGLKLLYTG 166
Query: 235 DFRASRL-MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
D R S + + +VL ++ TY K P +E+V V + L Q
Sbjct: 167 DVRLSETQLLGGADVSGLEADVLIIEATYG--KSDHPPRENVEALFVSDVREVL--QGGG 222
Query: 294 LVVVGAYSIGKESVFLAI 311
V+V A+ +G+ LA+
Sbjct: 223 TVLVPAFGVGRGQEILAV 240
>gi|296109857|ref|YP_003616806.1| KH-domain/beta-lactamase-domain protein [methanocaldococcus
infernus ME]
gi|295434671|gb|ADG13842.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus
infernus ME]
Length = 631
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCS------------------------ 172
SI+ A +TH H DH G GL + GP+YC+
Sbjct: 226 SIEDLDAVIITHAHLDHCGFLPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLDIAEKEGKP 285
Query: 173 -PLTARLVRMCLLVNPSYIHPLELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY 230
P +++ ++ C+ ++ PL+ T + +K+TL A H G+A+ H +G
Sbjct: 286 VPFSSKEIKECV----KHVIPLDYGVTTDISPSIKLTLHNAGHVLGSAIAHLHFGEGLYN 341
Query: 231 L-HTGD--FRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
L +TGD F SRL++ P + R+ L +++TY P + + ++R+
Sbjct: 342 LAYTGDLKFDTSRLLE--PAVCQFPRLEALIIESTYGGYDDVLPDRAEAEKELLRIVIEH 399
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAI 311
++K K L+ V + +G+ + +
Sbjct: 400 IEKGGKILIPV--FGVGRAQELMLV 422
>gi|409730231|ref|ZP_11271817.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Halococcus hamelinensis 100A6]
gi|448723594|ref|ZP_21706111.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Halococcus hamelinensis 100A6]
gi|445787430|gb|EMA38174.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Halococcus hamelinensis 100A6]
Length = 335
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 26/163 (15%)
Query: 149 LTHFHYDHYGGLGKRWSHGP--IYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKV 206
L+H H DH ++ P + CS +TARL PL T +D V
Sbjct: 35 LSHAHGDHL------YTRAPEAVVCSDVTARLAN----ARREDEGPLTRTTHPRVDQVP- 83
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDF--RASRLMQSYPLLV---NHRVNVLYLDTT 261
A H PG+ DG YL+TGDF R+ ++ + + V+VL +TT
Sbjct: 84 ----AGHVPGSRATIVDDPDGTTYLYTGDFSPRSRFVLDGFDAAAVADEYDVDVLITETT 139
Query: 262 YCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK 304
Y PKY F +DVL + + L + +T V++ Y++G+
Sbjct: 140 YGEPKYVF-DDQDVLEARI---VDWLDETHETPVLLFGYTLGR 178
>gi|134045919|ref|YP_001097405.1| beta-lactamase domain-containing protein [Methanococcus maripaludis
C5]
gi|132663544|gb|ABO35190.1| beta-lactamase domain protein [Methanococcus maripaludis C5]
Length = 635
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 47/208 (22%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCS------------------------ 172
SI+ A +TH H DH G GL + GP+YC+
Sbjct: 230 SIEEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGKN 289
Query: 173 -PLTARLVRMCLLVNPSYIHPLELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY 230
P +++ ++ C+ + PL+ T + +K+TL A H G+A+ H + +G
Sbjct: 290 VPYSSKDIKNCI----KHTIPLDYGVTTDIAPAIKLTLHNAGHILGSAIAHCHVGEGLYN 345
Query: 231 L-HTGD--FRASRLMQ----SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
+ +TGD F ASRL++ +P R+ L +++TY P +++ +R+
Sbjct: 346 VAYTGDIKFEASRLLEPAVCQFP-----RLETLIIESTYGGYDDVLPERDETEKEFLRVI 400
Query: 284 KNCLKKQPKTLVVVGAYSIGKESVFLAI 311
+ ++ K V++ + IG+ + +
Sbjct: 401 AETIARKGK--VIIPVFGIGRAQELMLV 426
>gi|448339465|ref|ZP_21528489.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Natrinema pallidum DSM 3751]
gi|445620017|gb|ELY73527.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Natrinema pallidum DSM 3751]
Length = 572
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSH-GPIYCSPLTARLVRMCLLVNPSY---------IHPLE 194
SA LTH H DHY LG H P+Y + TA+++ + + LE
Sbjct: 55 SAVCLTHAHLDHYQSLGATLDHAAPVYAAADTAQMLEDVFAAGADHYELSNTARVLEQLE 114
Query: 195 LNTE--HVIDGVKVTLLEANHCPGAALIHFRLQDG---QCYLHTGDFRASRLMQSYP 246
E V+ G++V + A H PGAA F + DG + L TGDF +R YP
Sbjct: 115 PIAEWTQVVPGLRVQPVPAGHTPGAAGFLFDVTDGDEQRTILVTGDF-TNRRAAGYP 170
>gi|397470398|ref|XP_003806809.1| PREDICTED: protein artemis [Pan paniscus]
Length = 572
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDTT+C+P+ Y+ PS+E+ L+ V+ L +
Sbjct: 12 LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVQ 71
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 72 SWITQSLYHAVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 126
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 127 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 181
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 182 NVIVRTGESSYRACFSFHSSYSEIKDFL 209
>gi|410963230|ref|XP_003988168.1| PREDICTED: protein artemis isoform 2 [Felis catus]
gi|410963232|ref|XP_003988169.1| PREDICTED: protein artemis isoform 3 [Felis catus]
gi|410963234|ref|XP_003988170.1| PREDICTED: protein artemis isoform 4 [Felis catus]
Length = 575
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDTT+C+PK Y+ PS+E+ L+ ++ L +
Sbjct: 17 LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLSGILELVR 76
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + P +V + + G E +F +S+ G++++ + L F + P++ +L
Sbjct: 77 SWITRSPYHVVWLNCKAAYGYEYLFTHLSEEFGIQVHVDK-----LDMFRNMPDILHHLT 131
Query: 343 TQGNDTLLHVLPMSSLKFETLKDYLK----PYGNQYAAVLAFRPTGWTYSET-VGNQLDL 397
T N T +H + + ++Y P GN + S G +
Sbjct: 132 TDRN-TQIH-----ACRHPKAEEYFHWNKLPCGNISKNTIPLHTISIKPSTMWFGERTRK 185
Query: 398 IRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 186 TNVIVRTGESSYRACFSFHSSYSEVKDFL 214
>gi|393238139|gb|EJD45677.1| hypothetical protein AURDEDRAFT_103419, partial [Auricularia
delicata TFB-10046 SS5]
Length = 738
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 82/222 (36%), Gaps = 66/222 (29%)
Query: 126 IPGTPFTVDAF---RYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV--- 179
IP P +D F R + Y L+H H DH GL + + CSP +++
Sbjct: 11 IPPYPIRIDTFYTPRDAVFSPPALYLLSHTHVDHLTGLSAKSFGARVICSPDAKQMLLNM 70
Query: 180 -----RMC------LLVNPSYIH-----------------------PLELNTEHVID--- 202
R+ L N Y H P+ LN V +
Sbjct: 71 EPAADRIAYDGGDRALRNRPYSHLKIDPVTREDGTVDYSMTRDLLLPVPLNAPRVFELSD 130
Query: 203 --GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA----------SRLMQSY--PLL 248
V +T+L+ANHC GA + G LHTGDFRA + L+Q Y P
Sbjct: 131 KQHVSITVLDANHCLGAVMFLVEGDKG-AVLHTGDFRAEPAFLASLKLNPLIQRYLAPKF 189
Query: 249 V--------NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRL 282
+ +YLDT ++ P+K D + +V+L
Sbjct: 190 SFAGTDNGPTQALEAIYLDTACMLQMHQVPAKVDATDGLVQL 231
>gi|380490332|emb|CCF36086.1| artemis protein [Colletotrichum higginsianum]
Length = 580
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 204 VKVTLLEANHCPGAALIHFRLQD-GQCYLHTGDFRAS----RLMQSYPLLVNHRVNVLYL 258
++VTL +ANHCPGA + F ++D + L+TGD R+ + P ++ + + L
Sbjct: 52 IQVTLFDANHCPGAVM--FLIEDLHRAILYTGDVRSEPWFVNSIARNPAVIEYTSGIRTL 109
Query: 259 DTTYCNPKY----KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKA 314
D Y + + F +K + + L + T+ + A++ G E V++A+SKA
Sbjct: 110 DKIYLDTSFLKDVPFQTKAE---GIAELLRKVASYPNDTVFHIQAWTYGYEQVWIALSKA 166
Query: 315 LGVKIYANASRRRVLQSF 332
L +I+ + + R+ +
Sbjct: 167 LRSRIHVDDYKMRMFSAL 184
>gi|261402359|ref|YP_003246583.1| beta-lactamase [Methanocaldococcus vulcanius M7]
gi|261369352|gb|ACX72101.1| beta-lactamase domain protein [Methanocaldococcus vulcanius M7]
Length = 428
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 29/197 (14%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCL--LVNPS------ 188
SIK F++H H DH G L +S PI + LT +LV++ L ++ S
Sbjct: 46 SIKDIDKVFVSHAHLDHSGSLPILFSKRIDVPIITTELTKKLVKVLLKDMIRISETENRK 105
Query: 189 -------------YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
Y PL + L A H PG+A I ++G+ L+TGD
Sbjct: 106 IPYNYHDIKETMRYTIPLGYKEKKYYKDFSYELFSAGHIPGSASILLNYENGKNILYTGD 165
Query: 236 --FRASRLMQSYPL-LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
R +RL + L +NVL +++TY N + P ++ V ++ K L +
Sbjct: 166 IKLRNTRLTKGADLSYTKDDINVLIIESTYGNSIH--PDRKAVELSFIQKIKEVLFRGGV 223
Query: 293 TLVVVGAYSIGKESVFL 309
L+ V A +E +
Sbjct: 224 VLIPVFAVDRAQEIALI 240
>gi|193084111|gb|ACF09778.1| beta-lactamase domain protein [uncultured marine crenarchaeote
KM3-153-F8]
Length = 422
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 77/194 (39%), Gaps = 34/194 (17%)
Query: 138 YGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPI--YCSPLTARLVRMCL--LVNPSY---- 189
Y + K A L+H H DH G + + I YC+ +A + ++ + +N S
Sbjct: 43 YTNPKEVDAVILSHAHLDHSGAIPSFFVSNNIDVYCTSASADISKLLIDDFINLSNDVTK 102
Query: 190 ----------------IHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHT 233
I +ELN E I +K+ L+ A H PG+A I +G+ +T
Sbjct: 103 QYIPFQHLELKKMMDNIKRVELNQEFEIGNIKIKLINAGHIPGSASIIIE-GEGKRIAYT 161
Query: 234 GDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKF---PSKEDVLNYVVRLTKNCLKKQ 290
GD A Q L+ N LD Y P ++DV N V K K
Sbjct: 162 GDINA----QDSSLVQGADTNYGELDLLITESTYGLNDHPERKDVENEFVSFAKEITDKG 217
Query: 291 PKTLVVVGAYSIGK 304
L V A+++G+
Sbjct: 218 GTLL--VPAFAVGR 229
>gi|284161558|ref|YP_003400181.1| RNA-metabolising metallo-beta-lactamase [Archaeoglobus profundus
DSM 5631]
gi|284011555|gb|ADB57508.1| RNA-metabolising metallo-beta-lactamase [Archaeoglobus profundus
DSM 5631]
Length = 631
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 30/201 (14%)
Query: 146 AYFLTHFHYDHYG---GLGKRWSHGPIYCSPLTARLVRMCLL------------------ 184
A +TH H DH G L K GP+Y +P T L+ + L
Sbjct: 232 AVVITHAHLDHCGLVPVLFKYGYRGPVYLTPPTRDLMVLLQLDFIEVASREGTTIPYESH 291
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYL-HTGDFRAS 239
+ + H + L+ V D V++T A H G+A+ HF + +G + TGDF+
Sbjct: 292 WIRTALKHCITLDYGVVTDIAPDVRLTFYNAGHILGSAIAHFHIGEGLYNIAFTGDFKFE 351
Query: 240 RLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
R N R+ L ++ TY + PS+++ ++R+ + K K V++
Sbjct: 352 RTRLFDKAETNFPRLEALIMEATYGGSQDFQPSRKEAEENLIRIVNETISKGGK--VLIP 409
Query: 299 AYSIGK-ESVFLAISKALGVK 318
A+++G+ + V + + +A+ K
Sbjct: 410 AFAVGRSQEVMIVLEEAIRTK 430
>gi|410337685|gb|JAA37789.1| DNA cross-link repair 1C [Pan troglodytes]
gi|410337687|gb|JAA37790.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 577
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ Y + +YLDT C+P+ Y+ PS+E+ L+ V+ L +
Sbjct: 17 LYTGDFRLVQGEAARMELLYSGGRVKDIQSVYLDTMLCDPRFYQIPSREECLSGVLELVQ 76
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 77 SWITRSLYRVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 131
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 132 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 186
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 187 NVIVRTGESSYRACFSFHSSYSEIKDFL 214
>gi|26353912|dbj|BAC40586.1| unnamed protein product [Mus musculus]
Length = 473
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 253 VNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI-GKESVFLA 310
+ +YLDTT+C+P+ Y+ PS+E L ++ L ++ + + P +V + + G E +F
Sbjct: 29 IQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWVTRSPHHVVWLNCKAAYGYEYLFTN 88
Query: 311 ISKALGVKIYANASRRRVLQSF-DWPELSGNLCTQGNDTL---LHVLPMSSLKFETLKDY 366
+S+ LGV+++ + L F + P++ +L T N + H ++ L
Sbjct: 89 LSEELGVQVHVDK-----LDMFKNMPDILHHLTTDRNTQIHACRHPKAEECFQWNKLPCG 143
Query: 367 LKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFV 426
+ ++ +P+ + E ++ R + Y +S HSSF+E+++F+
Sbjct: 144 ITSQNKTALHTISIKPSTMWFGERTRKTNVIV----RTGESSYRACFSFHSSFSEIKDFL 199
>gi|374636367|ref|ZP_09707940.1| KH-domain/beta-lactamase-domain protein [Methanotorris formicicus
Mc-S-70]
gi|373559249|gb|EHP85554.1| KH-domain/beta-lactamase-domain protein [Methanotorris formicicus
Mc-S-70]
Length = 635
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 39/156 (25%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCS------------------------ 172
SI+G A +TH H DH G GL + GP+YC+
Sbjct: 230 SIEGIDAVVITHAHLDHCGFVPGLFRYGYDGPVYCTRPTRDLMTLLFKDYLDIAEKEGKD 289
Query: 173 -PLTARLVRMCLLVNPSYIHPLELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY 230
P ++ ++ C+ + P++ T + +K+TL A H G+A+ H + DGQ
Sbjct: 290 VPYASKDIKTCV----KHTMPIDYGVTTDITPTIKLTLHNAGHILGSAIAHCHIGDGQYN 345
Query: 231 L-HTGD--FRASRLMQSYPLLVNH-RVNVLYLDTTY 262
+ +TGD F ASRL++ P + R+ L +++TY
Sbjct: 346 IAYTGDIKFEASRLLE--PAVCQFPRLETLIIESTY 379
>gi|390466398|ref|XP_002751323.2| PREDICTED: 5' exonuclease Apollo [Callithrix jacchus]
Length = 72
Score = 52.0 bits (123), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV 185
IP TP VD + +FL+H H DH GL W+ P+YCSP+TA L+ L V
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 186 NPSYIHP 192
HP
Sbjct: 65 IFDIHHP 71
>gi|336121952|ref|YP_004576727.1| KH-domain/beta-lactamase-domain-containing protein
[Methanothermococcus okinawensis IH1]
gi|334856473|gb|AEH06949.1| KH-domain/beta-lactamase-domain protein [Methanothermococcus
okinawensis IH1]
Length = 635
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCS------------------------ 172
SI+ A +TH H DH G GL + GP+YCS
Sbjct: 230 SIEEIDAVVITHAHLDHCGFVPGLFRYGYDGPVYCSKPTRDLMTLLQKDYLDIAEKEGKV 289
Query: 173 -PLTARLVRMCLLVNPSYIHPLELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY 230
P +++ ++ C+ + P++ T + +K+T+ A H G+A+ H + DG
Sbjct: 290 MPYSSKDIKKCV----KHTIPIDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHIGDGLYN 345
Query: 231 L-HTGD--FRASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
+ +TGD F ASRL++ P + R+ + +++TY P + + + +
Sbjct: 346 VAYTGDIKFEASRLLE--PAVCQFPRLETIIIESTYGGYDDVLPDRAETEKEFLNVVAET 403
Query: 287 LKKQPKTLVVVGAYSIGKESVFLAI 311
+K++ K V++ + IG+ + +
Sbjct: 404 IKRKGK--VIIPVFGIGRAQELMLV 426
>gi|324509289|gb|ADY43911.1| 5' exonuclease Apollo [Ascaris suum]
Length = 420
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 34/236 (14%)
Query: 201 IDGVKVTLLEANHCPGAALIHFR---LQDGQCYLHTGDFRASRLMQSYP----LLVNHRV 253
+DG VT L ANH GA + F +++G L TGDFRA P LL H
Sbjct: 1 MDGFWVTPLNANHIRGAVMYLFEGPAIKEGSV-LCTGDFRADTHFYVQPSTILLLQEHIF 59
Query: 254 NVLYLDTTYCNPKYK-FPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAIS 312
++++D TY K FPS+E+ L V++ ++ LV+ +G+E L +S
Sbjct: 60 GMIHVDNTYSESLEKEFPSREESLEEAVKVIRSLPNDANIYLVM---NRVGREQFLLDLS 116
Query: 313 KALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLKFETLKDYLKPYGN 372
+ L +I + R+ + ++ ELS + +T + + + E + L+ N
Sbjct: 117 ERLQERIALHKWRQAIADAW---ELSDHFAKPDEETRIR-----TCRREETRALLQ---N 165
Query: 373 QYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428
+ A V+ T ++ + +I R + YS+H S ELR+F+ +
Sbjct: 166 ENAYVIEV-----TMLASLKADVSVIHDRVR------TIDYSDHCSPNELRDFLSL 210
>gi|255513556|gb|EET89822.1| beta-lactamase domain protein [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 419
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 144 CSAYFLTHFHYDHYGGLGKRWS---HGPIYCSPLTARLVRMCL-----LVNPSYI----- 190
A F++H H DH G + +S G +Y + T L+++ + + PS +
Sbjct: 34 IDAVFISHAHLDHCGYVPHIYSAEYRGEVYATKPTLELMQVLISDYMRISEPSNVSKKGL 93
Query: 191 -------HPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFRASRL- 241
+E E I +K+T + A H G+ALI R+ DG+ ++TGD ++
Sbjct: 94 SEMLKHQRAVEYKREISIKDLKITFIPAGHILGSALI--RVTDGKNTLIYTGDINLAKTK 151
Query: 242 MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYS 301
+ + L N +VL ++TY F S+ +L +V K+ +K K VV+ +++
Sbjct: 152 LLNGADLKNLSGDVLITESTYGGKTDIFESEVSILKSLVYGIKDTIKNGGK--VVIPSFA 209
Query: 302 IGK-ESVFLAI 311
+G+ + V L+I
Sbjct: 210 VGRAQEVLLSI 220
>gi|255725608|ref|XP_002547733.1| hypothetical protein CTRG_02040 [Candida tropicalis MYA-3404]
gi|240135624|gb|EER35178.1| hypothetical protein CTRG_02040 [Candida tropicalis MYA-3404]
Length = 575
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 20/134 (14%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVR--------MCLLVNPSYIHPLELNT 197
+ LTH H DH GL + +YCS LT ++ + LV Y P E+ T
Sbjct: 28 VFLLTHSHQDHLQGLLNKSFCNRVYCSLLTKCIIALEDKYSTVLPYLVAKEYNEPFEIET 87
Query: 198 EHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS--------YPLLV 249
+ VTL+ + HCPG+ + D + L TGD RA S +P +
Sbjct: 88 SQC--KLTVTLIPSYHCPGSVMFLLEGID-KAVLATGDIRAESWWASTLIKNTYLFPYIT 144
Query: 250 NHRV-NVLYLDTTY 262
+V + +Y+DTT+
Sbjct: 145 GLKVLDQIYIDTTF 158
>gi|145592084|ref|YP_001154086.1| mRNA 3-end processing factor [Pyrobaculum arsenaticum DSM 13514]
gi|145283852|gb|ABP51434.1| putative mRNA 3-end processing factor [Pyrobaculum arsenaticum DSM
13514]
Length = 327
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 63/307 (20%)
Query: 131 FTVDAFRYGSIKGCSAYFL-THFHYDH-------YGGLGKRWSHGPI---YCSPLTARLV 179
F VD G IKG + L TH H DH Y + + + + Y P R+V
Sbjct: 31 FVVDPA--GPIKGLVDFVLITHGHSDHVSLHAYRYPAVATKETFAAMAVRYGRPHPRRIV 88
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
V+P + LELN V++ +A H G+ + ++ Q L TGDF S
Sbjct: 89 -----VSPGDV--LELNE------VQIAAFDAGHILGSVMYLVEVEGLQV-LFTGDFNTS 134
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
+ + R +VL ++ TY +P Y FP++ ++ + RL + K V + A
Sbjct: 135 GSILTDGAEPVERPDVLVMEATYGDPAYVFPNRAEIYD---RLIEAVEKYASDGGVAISA 191
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
Y +GK ++K G ++ A+ R + ++ E G G + ++P
Sbjct: 192 YPLGKAQ---EVAKLFGRRVGAH----RTVAKYN--EALG--IQTGKSGEIVIVP----- 235
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSF 419
N AA P+G+ E G +D ++G+P S+HS F
Sbjct: 236 ------------NLRAA-----PSGYHRIEVSGWYVDPRLEAEARARGVHGLPLSDHSDF 278
Query: 420 TELREFV 426
L +FV
Sbjct: 279 PSLIDFV 285
>gi|302348117|ref|YP_003815755.1| exonuclease [Acidilobus saccharovorans 345-15]
gi|302328529|gb|ADL18724.1| Putative exonuclease [Acidilobus saccharovorans 345-15]
Length = 674
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 36/208 (17%)
Query: 144 CSAYFLTHFHYDHYG---GLGKRWSHGPIYCSPLTARLVRMCL--LVN--------PSYI 190
A ++H H DH G L K GPIY +P T + + L +N P Y
Sbjct: 249 LDAVVISHAHMDHVGLAPMLYKYGYRGPIYMTPATRDIATLMLQDFINLYIREGKEPPYT 308
Query: 191 ---------HPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFR 237
H + +N + V D K+T +A H G+AL+H + G L+TGD +
Sbjct: 309 QKDLITMLNHTITVNYDVVTDLSPDAKLTFSDAGHILGSALVHIHIGQGLYNILYTGDLK 368
Query: 238 ASRLMQSYPLLVN-------HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
+ + L + HR+ L +++TY + P++E+ ++ L K+
Sbjct: 369 YYSVRDNKALRLQPPANTEFHRIETLIMESTYG--ATETPTREEAEQQLMDLINRTYKRG 426
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVK 318
K L+ V A ++ + L ++KA+ K
Sbjct: 427 GKVLLPVMAVGRSQDMMVL-LNKAMQEK 453
>gi|333910182|ref|YP_004483915.1| KH-domain/beta-lactamase-domain-containing protein [Methanotorris
igneus Kol 5]
gi|333750771|gb|AEF95850.1| KH-domain/beta-lactamase-domain protein [Methanotorris igneus Kol
5]
Length = 635
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 39/156 (25%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCS------------------------ 172
SI+ A +TH H DH G GL + GP+YC+
Sbjct: 230 SIEEIDAVVITHAHLDHCGFVPGLFRYGYDGPVYCTRPTRDLMTLLFKDYLDIAEKEGKD 289
Query: 173 -PLTARLVRMCLLVNPSYIHPLELN-TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCY 230
P TA+ ++ C+ + P++ T + +K+TL A H G+A+ H + DGQ
Sbjct: 290 VPYTAKDIKTCV----KHTIPIDYGVTTDITPTIKLTLHNAGHILGSAIAHCHIGDGQYN 345
Query: 231 L-HTGD--FRASRLMQSYPLLVNH-RVNVLYLDTTY 262
+ +TGD F ASRL++ P + R+ L +++TY
Sbjct: 346 IAYTGDIKFEASRLLE--PAVCQFPRLETLIIESTY 379
>gi|284161132|ref|YP_003399755.1| beta-lactamase [Archaeoglobus profundus DSM 5631]
gi|284011129|gb|ADB57082.1| beta-lactamase domain protein [Archaeoglobus profundus DSM 5631]
Length = 409
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 35/207 (16%)
Query: 146 AYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLV------RMCLLVNPSY----IHPLE 194
+ ++H H DH G + P IY +P T L M L+ NP Y E
Sbjct: 48 SVIISHGHLDHVGVAPNLVDYDPKIYMTPPTLDLSDIILRDSMKLMRNPPYTPRQFRQFE 107
Query: 195 LNTEHV-------IDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR--ASRLMQ-- 243
N V IDG +VTL A H PG+A IH + L+TGD + +RL++
Sbjct: 108 SNVIEVDYEEPIYIDGWEVTLFNAGHIPGSASIH--MSKDVNILYTGDIKLEETRLLEPA 165
Query: 244 --SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYS 301
+P ++L +++TY ++ P ++++ V L K ++ A++
Sbjct: 166 YTDFP-----ETDILIVESTYFGVEH--PDRKELEKAFVESILETLDN--KGHAIIPAFA 216
Query: 302 IGKESVFLAISKALGVKIYANASRRRV 328
+G+ L I ++ G+ Y + R V
Sbjct: 217 VGRTQEVLMILESYGITPYVDGMGRDV 243
>gi|407769981|ref|ZP_11117354.1| beta-lactamase-like protein [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407287125|gb|EKF12608.1| beta-lactamase-like protein [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 362
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMC--LLVNPSYIHPLELNTEHVI 201
+A F+TH H DH G + + G PIYC+ +TAR + +++ P Y E +
Sbjct: 51 NAVFITHDHVDHIGAAAEVIAAGLPIYCTEVTARSLPAGANVIILPPY-------GEIQV 103
Query: 202 DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
DGV VT H G +HF L G L+TGDF
Sbjct: 104 DGVTVTTGRTGHAFGGVWLHFELGGG--VLYTGDF 136
>gi|238584636|ref|XP_002390621.1| hypothetical protein MPER_10069 [Moniliophthora perniciosa FA553]
gi|215454248|gb|EEB91551.1| hypothetical protein MPER_10069 [Moniliophthora perniciosa FA553]
Length = 323
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLT 150
R PFYK + G P VDAF+YGSI G +AYFLT
Sbjct: 291 RKAPFYKVMQGMPIAVDAFKYGSIPGVTAYFLT 323
>gi|435850996|ref|YP_007312582.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Methanomethylovorans hollandica DSM 15978]
gi|433661626|gb|AGB49052.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Methanomethylovorans hollandica DSM 15978]
Length = 425
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 148 FLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCLL----------VNPSY----IHP 192
L+H H DH G L P ++ +P TA L + L VN Y +H
Sbjct: 60 LLSHCHIDHSGLLPNLMDIEPEVFMTPPTADLANLLLKDSLKIAESTGVNAPYDAGDLHT 119
Query: 193 LELNTEHV-------IDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS--RLMQ 243
T+ V G V +A H PGAA H + G+ L+TGD S RL+
Sbjct: 120 FMYKTKTVDYRIKFQTHGYNVEFYDAGHIPGAACTHVTSKSGESLLYTGDINTSDTRLVS 179
Query: 244 SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIG 303
N + L +++TY + K P KE ++ L K+ L V++ A++IG
Sbjct: 180 GAVEFPN--ADYLAIESTYFS-KEHIPRKETEETFIESL-KSTLDIGGN--VIIPAFAIG 233
Query: 304 KESVFLAISKALGVKIYANA 323
+ L + A G++ Y +
Sbjct: 234 RTQELLMLLDAYGIRPYVDG 253
>gi|404254732|ref|ZP_10958700.1| RNA procession exonuclease-like protein [Sphingomonas sp. PAMC
26621]
Length = 344
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 15/183 (8%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+TH H DH R HG ++ +P T L M HP+ H V+ T
Sbjct: 46 LVTHGHADH-----ARGGHGAVWATPET--LAIMDARYGAQAGHPVAYGESHDFGDVRAT 98
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
+ A H G+A I + G+ + +GD++ P + +V + T+ P +
Sbjct: 99 FVPAGHVLGSAQILLEYR-GERIVVSGDYKRRPDPTCTPFEPV-KCDVFITEATFGLPVF 156
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG--VKIYANASR 325
+ P D ++ ++ L P V+VGAY++GK +A + G IY + +
Sbjct: 157 RHPDTGDEIDKLI----AALHANPDRCVLVGAYALGKAQRVIAELRVRGHAAPIYIHGAL 212
Query: 326 RRV 328
R+
Sbjct: 213 ERL 215
>gi|379003209|ref|YP_005258881.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Pyrobaculum oguniense TE7]
gi|375158662|gb|AFA38274.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Pyrobaculum oguniense TE7]
Length = 314
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 63/307 (20%)
Query: 131 FTVDAFRYGSIKGCSAYFL-THFHYDH-------YGGLGKRWSHGPI---YCSPLTARLV 179
F VD G IKG + L TH H DH Y + + + + Y P R+V
Sbjct: 18 FVVDPA--GPIKGPVDFVLITHGHSDHVSLHAYRYPAVATKETFAAMAVRYGRPHPRRIV 75
Query: 180 RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239
V+P + LELN V++ +A H G+ + ++ Q L TGDF S
Sbjct: 76 -----VSPGDV--LELNE------VQIAAFDAGHILGSVMYLVEVEGLQV-LFTGDFNTS 121
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
+ + R +VL ++ TY +P Y FP++ ++ + RL + K V + A
Sbjct: 122 GSILTDGAEPVERPDVLVMEATYGDPAYVFPNRAEIYD---RLIEAVEKYASDGGVAISA 178
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSSLK 359
Y +GK ++K G ++ A+ R + ++ E G G + ++P
Sbjct: 179 YPLGKAQ---EVAKLFGRRVGAH----RTVAKYN--EALG--IQTGKSGEIVIVP----- 222
Query: 360 FETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSF 419
N AA P+G+ E G +D ++G+P S+HS F
Sbjct: 223 ------------NLRAA-----PSGYHRIEVSGWYVDPRLDAEARTRGVHGLPLSDHSDF 265
Query: 420 TELREFV 426
L +FV
Sbjct: 266 PSLIDFV 272
>gi|422293129|gb|EKU20429.1| dna cross-link repair protein pso2 [Nannochloropsis gaditana
CCMP526]
Length = 85
Score = 51.6 bits (122), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 124 KKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG 167
K I GT F VD F + S K CSAYFLTHFH DHY GL + H
Sbjct: 9 KWIEGTSFLVDGFNFLSPK-CSAYFLTHFHSDHYWGLRPSFCHA 51
>gi|395491837|ref|ZP_10423416.1| RNA procession exonuclease-like protein [Sphingomonas sp. PAMC
26617]
Length = 344
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 15/183 (8%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+TH H DH G HG ++ +P T L M HP+ H V+ T
Sbjct: 46 LVTHGHADHARG-----GHGAVWATPET--LAIMDARYGAQAGHPVAYGESHDFGDVRAT 98
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
+ A H G+A I + G+ + +GD++ P + +V + T+ P +
Sbjct: 99 FVPAGHVLGSAQILLEYR-GERIVVSGDYKRRPDPTCTPFEPV-KCDVFITEATFGLPVF 156
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG--VKIYANASR 325
+ P D ++ ++ L P V+VGAY++GK +A + G IY + +
Sbjct: 157 RHPDTGDEIDKLI----AALHANPDRCVLVGAYALGKAQRVIAELRVRGHAAPIYIHGAL 212
Query: 326 RRV 328
R+
Sbjct: 213 ERL 215
>gi|393722065|ref|ZP_10341992.1| RNA procession exonuclease-like protein [Sphingomonas sp. PAMC
26605]
Length = 332
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+TH H DH R H ++ +P T L M P H + H VK T
Sbjct: 34 LVTHGHADH-----ARGGHEAVWATPET--LAIMDARYGPQAGHAIAYGDSHTFGDVKAT 86
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
+ A H G+A I + G+ + +GD++ R + + +V + T+ P +
Sbjct: 87 FVPAGHVLGSAQILLEYR-GERVVVSGDYK-RRADPTCAGFEPVKCDVFITEATFGLPVF 144
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG 316
+ P D ++ +LT L P V+VGAY++GK +A +A G
Sbjct: 145 RHPETGDEID---KLTA-ALHANPTRCVLVGAYALGKAQRVIAELRARG 189
>gi|374326785|ref|YP_005084985.1| mRNA 3'-end processing factor [Pyrobaculum sp. 1860]
gi|356642054|gb|AET32733.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum sp. 1860]
Length = 425
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 42/221 (19%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARL--------------------- 178
K +A FL+H H DH GGL + + P+Y +PLT L
Sbjct: 49 KDLTATFLSHAHLDHSGGLPSLYVSTKTPLYSTPLTMELSDLMYADAIKLSGYYLPYTLD 108
Query: 179 -VR--MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
VR M + +Y P+E+ + V VT A H PG+A+ +G+ + TGD
Sbjct: 109 EVREAMSSAIPLTYGEPVEIGRDAV-----VTAYNAGHIPGSAMAVIE-AEGRVVVFTGD 162
Query: 236 FRA--SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
F + +++ + + R +V+ ++ TY + + P +E + R K L+
Sbjct: 163 FNTVDTNMLRGADVYNLPRRPDVVIMEATYASTDH--PPREKLEEEFTRSVKEVLEGGGS 220
Query: 293 TLVVVGAYSIGKESVFLAISKALGV---KIYANASRRRVLQ 330
V++ ++++G+ L GV IY + R++ Q
Sbjct: 221 --VLIPSFALGRAQEILLTLVKHGVDSYPIYVDGLARQINQ 259
>gi|402826949|ref|ZP_10876087.1| hypothetical protein LH128_27446 [Sphingomonas sp. LH128]
gi|402259515|gb|EJU09740.1| hypothetical protein LH128_27446 [Sphingomonas sp. LH128]
Length = 334
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDG-VKV 206
+TH H DH G HG + +P T ++++ + P+ + G V
Sbjct: 34 LVTHGHADHARG-----GHGATFATPETLAIMKLRYATEEGAV-PVPYGERIALPGDVHA 87
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPK 266
T + A H G+A I G+ + TGDF+ R + P +VL + T+ P
Sbjct: 88 TWIPAGHVLGSAQILLE-HAGERIIVTGDFK-RRADPTCPPFEVTPCDVLVTEATFGLPV 145
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLA 310
++ P E+ + ++ + L P+ V+VGAY++GK +A
Sbjct: 146 FRHPPVEEEIAKLL----SALAANPERCVLVGAYALGKAQRLIA 185
>gi|223478352|ref|YP_002582770.1| RNA-metabolising metallo-beta-lactamase family protein
[Thermococcus sp. AM4]
gi|214033578|gb|EEB74405.1| RNA-metabolising metallo-beta-lactamase family [Thermococcus sp.
AM4]
Length = 648
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 49/219 (22%)
Query: 131 FTVDAFRYGSIKGC-SAYFLTHFHYDHYGGLGKRWSH----GPIYCSPLTARLVR----- 180
F FRY +G A +TH H DH G L + + GPIY +P T L+
Sbjct: 232 FDAPEFRYVLDEGLLDAIIITHAHLDHSGMLPYLFRYKLFDGPIYTTPPTRDLMTLLQQD 291
Query: 181 ---------MCLLVNPSYI-----HPLELNTEHVID---GVKVTLLEANHCPGAALIHFR 223
M L P I H + L+ V D +++TL A H G+A++H
Sbjct: 292 FIEIQHMNGMEPLYRPRDIKEVIKHTITLDYGEVRDIAPDIRLTLHNAGHILGSAIVHLH 351
Query: 224 LQDGQCYLH----TGDFR--ASRLMQ----SYPLLVNHRVNVLYLDTTYCNPK-YKFPSK 272
+ +G LH TGDF+ +RL++ +P RV L +++TY Y+ P +
Sbjct: 352 IGNG---LHNIAVTGDFKFIPTRLLEPAVSRFP-----RVETLVMESTYGGSNDYQMP-R 402
Query: 273 EDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAI 311
E+ ++ + + +K+ K V++ A ++G+ + +
Sbjct: 403 EEAEKRLIEVIHHTIKRGGK--VLIPAMAVGRAQEIMMV 439
>gi|70606450|ref|YP_255320.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius DSM 639]
gi|449066664|ref|YP_007433746.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius N8]
gi|449068938|ref|YP_007436019.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius Ron12/I]
gi|68567098|gb|AAY80027.1| hypothetical metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius DSM 639]
gi|449035172|gb|AGE70598.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius N8]
gi|449037446|gb|AGE72871.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius Ron12/I]
Length = 631
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 34/204 (16%)
Query: 141 IKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------- 184
++ A +TH H DH G L K GP+Y +P T ++ + L
Sbjct: 228 LEDIDAVVITHAHLDHCGMVPLLFKYGYEGPVYMTPPTRDIMALAQLDALDVAEKEGRPI 287
Query: 185 ------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTG 234
V +H + L+ V D VK+T A H G+A+ H + +G ++TG
Sbjct: 288 PYTAKEVRRELLHTITLDYGEVTDIAPDVKLTFYNAGHILGSAMAHLHIGEGLHNVVYTG 347
Query: 235 DFRASR---LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
DF+ +R L ++ + RV+ + ++TTY + ++E+ ++ + + K
Sbjct: 348 DFKYARTKLLDKANDEFI--RVDTMIMETTYG--AHDQENREESEAKLIDIINKTISKGG 403
Query: 292 KTLVVVGAYSIGKESVFLAISKAL 315
K L+ V + G+E + L I+ A+
Sbjct: 404 KVLIPVLSVGRGQE-IMLVINDAM 426
>gi|448588157|ref|ZP_21649144.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Haloferax elongans ATCC BAA-1513]
gi|445736931|gb|ELZ88470.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Haloferax elongans ATCC BAA-1513]
Length = 560
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLLVNPSY------------IH 191
+A LTH H DHY LG HG P+Y + TA ++ + +
Sbjct: 55 AAICLTHAHLDHYQSLGDNLVHGAPVYATTDTATMLEDVFAAGEDHYELSNTNRVLEQLE 114
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDG---QCYLHTGDFRASRLMQSYP 246
P+ ++ ++ G++V + A H PGAA F + DG + L TGDF R YP
Sbjct: 115 PI-VDWTQIVPGLRVHPVPAGHTPGAAGFLFEITDGDESRTILVTGDF-TDRRAAGYP 170
>gi|374628280|ref|ZP_09700665.1| KH-domain/beta-lactamase-domain protein [Methanoplanus limicola DSM
2279]
gi|373906393|gb|EHQ34497.1| KH-domain/beta-lactamase-domain protein [Methanoplanus limicola DSM
2279]
Length = 630
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 40/208 (19%)
Query: 141 IKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------------- 184
+ A +TH H DH L K GP+Y +P T L M L
Sbjct: 229 LNSLDAVVITHAHLDHCALVPLLYKYGYEGPVYSTPATRDLSVMLQLDYLDVVANETSKV 288
Query: 185 ------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLH-TG 234
V H + LN V D VK+T A H G+A+ HF + DG + TG
Sbjct: 289 PYSSKEVQQYLKHSITLNYGSVTDIAPDVKLTYHNAGHILGSAIAHFHVGDGLYNIAFTG 348
Query: 235 DFR--ASRLM----QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288
DF SRL +P R+ +++++TY PS++D + + +
Sbjct: 349 DFNYAKSRLFGPATSQFP-----RLEAVFMESTYGGSNDMQPSRKDAEEKLYEAVNDTVN 403
Query: 289 KQPKTLVVVGAYSIGK-ESVFLAISKAL 315
+ K +++ A+++G+ + V LA+ + +
Sbjct: 404 RGGK--IIIPAFAVGRSQEVMLALEEGM 429
>gi|153955532|ref|YP_001396297.1| hypothetical protein CKL_2915 [Clostridium kluyveri DSM 555]
gi|219855928|ref|YP_002473050.1| hypothetical protein CKR_2585 [Clostridium kluyveri NBRC 12016]
gi|146348390|gb|EDK34926.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219569652|dbj|BAH07636.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 832
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 143 GCSAYFLTHFHYDHYGGL---GKRWSHGPIYCSPLTARLVRMCL-----LVN------PS 188
G A ++H H DH G L K + IY + +T L+R+ L ++N P
Sbjct: 56 GIDAIIISHSHMDHIGSLPIISKEYPLARIYATKMTKDLMRVLLYDSLKIMNNREGEIPL 115
Query: 189 Y-----------IHPLELNTEH-VIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
Y I P+ E + VK+T A H GAA ++ +G + ++GDF
Sbjct: 116 YAESDVKNMLNSIFPINYMVEFPIFQDVKLTFYMAGHIAGAACVYVTTPEGSLF-YSGDF 174
Query: 237 RASRLMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
L V R +V + TY + + E+ ++ + C +K+ K L
Sbjct: 175 SVFSQKTVEGLKVPRLRPDVAIFEATYGDRLHSNREVEE--ERLIDIINECKRKKGKML- 231
Query: 296 VVGAYSIGK-ESVFLAISKALG------VKIYANASRRRVLQSF 332
+ A+++G+ + V L I KAL +K+Y + R + +++
Sbjct: 232 -IPAFALGRSQEVLLTIKKALNKNILKDIKVYVDGMIRDINRTY 274
>gi|260941384|ref|XP_002614858.1| hypothetical protein CLUG_04873 [Clavispora lusitaniae ATCC 42720]
gi|238851281|gb|EEQ40745.1| hypothetical protein CLUG_04873 [Clavispora lusitaniae ATCC 42720]
Length = 793
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 29/193 (15%)
Query: 118 RSCPFYKKIPGTPFT-VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176
R F + PF VD F + + LTH H DH GL G +YCSP T
Sbjct: 86 RQMSFDGIVAEFPFIGVDRFNTAA----RTFLLTHCHQDHLVGLLNCSFSGTVYCSPETR 141
Query: 177 RLVR--------MCLLVNPSYIHPLELN----TEHVIDGVKVTLLEANHCPGAALIHFRL 224
L+ + + +Y P+E++ + V + +TL+ A HC G+ +
Sbjct: 142 LLLEDLQGYASVLPRIKTVAYNTPIEVDLPPEIQRVYGKIVITLIHAYHCLGSCMFLIEG 201
Query: 225 QDGQCYLHTGDFRASR-----LMQSY---PLLVNHR-VNVLYLDTTY---CNPKYKFPSK 272
+ G L TGD RA + L QS P L + ++ +YLDTT+ P + P
Sbjct: 202 EYGGSVLCTGDLRAEKWWVDSLGQSPCLGPYLAGLKTLDNIYLDTTFGYRGEPYIEMPPN 261
Query: 273 EDVLNYVVRLTKN 285
++ +R +N
Sbjct: 262 NSGVHVAIRWLEN 274
>gi|18313978|ref|NP_560645.1| mRNA 3'-end processing factor [Pyrobaculum aerophilum str. IM2]
gi|18161552|gb|AAL64827.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum aerophilum
str. IM2]
Length = 430
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 42/221 (19%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARL--------------------- 178
+ +A FL+H H DH GGL + + P+Y +PLT L
Sbjct: 49 RDLTATFLSHAHLDHSGGLPSLYVSTKTPLYSTPLTMELSDLMYTDAIKLSGYYLPYTLE 108
Query: 179 -VR--MCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
VR M V +Y P+E+ + VI T+ A H PG+A+ ++ G + TGD
Sbjct: 109 EVRETMSSAVPLTYGEPVEIGRDAVI-----TVYNAGHIPGSAISVIEVE-GYVVVFTGD 162
Query: 236 FRA--SRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
F S L++ L + +V+ ++ TY + + P +E + V+ K L+
Sbjct: 163 FNTVDSNLLRGADLYNIPKNPDVVIMEATYASTDH--PPRERLEREFVQSVKEVLEGGGS 220
Query: 293 TLVVVGAYSIGKESVFLAISKALGV---KIYANASRRRVLQ 330
V++ ++++G+ L G+ IY + R++ Q
Sbjct: 221 --VLIPSFALGRAQEILLTLVKYGIDAYPIYVDGLARQINQ 259
>gi|307594462|ref|YP_003900779.1| RNA-metabolising metallo-beta-lactamase [Vulcanisaeta distributa
DSM 14429]
gi|307549663|gb|ADN49728.1| RNA-metabolising metallo-beta-lactamase [Vulcanisaeta distributa
DSM 14429]
Length = 433
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 95/232 (40%), Gaps = 44/232 (18%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARL--------VRMCLLVNPSYIH 191
+ A FL+H H DH G L + S P+Y +PLT L +++ P
Sbjct: 54 RDIMAVFLSHAHLDHCGALPSLYVSSPPPVYATPLTLELADIMFKDAIKLSGYYLPYEDE 113
Query: 192 PLELNTEHVI-----------DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
++ +H I VK T++ A H PG+ L + +G L TGDF S+
Sbjct: 114 EIKAVLDHAIPVTYGEDVDISKDVKATIINAGHVPGSMLTLLEI-NGARVLFTGDFNLSQ 172
Query: 241 --LMQSYPL-LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
L++ + V V+V+ ++ TY + P +E+V +R+ K ++ L+ V
Sbjct: 173 SNLLRGADINNVPRDVDVVIMEGTYVTNTH--PPREEVEREFIRVIKETIEGGGSVLIPV 230
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
+IG+ L + +Y N D+P + L N +
Sbjct: 231 --LTIGRAQEIL-------ITLYKNG--------IDYPIIIDGLARIANQIV 265
>gi|302689741|ref|XP_003034550.1| hypothetical protein SCHCODRAFT_256591 [Schizophyllum commune H4-8]
gi|300108245|gb|EFI99647.1| hypothetical protein SCHCODRAFT_256591 [Schizophyllum commune H4-8]
Length = 834
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 29/142 (20%)
Query: 204 VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA--------SRLMQSYPLLVNHRVN- 254
V VTL++ANHCPGA + G LHTGDFRA +R P + N +N
Sbjct: 69 VTVTLIDANHCPGAVMYLIEGNKG-AILHTGDFRAEPWFLDGLTRHPSLQPYIHNGYLNK 127
Query: 255 ----------------VLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
+YLDT + PSK + ++ L K P T +
Sbjct: 128 LSPEDLALSTVLKTLDAIYLDTATVTSQLNVPSKARATSGLIELMKLY---PPSTHFFIN 184
Query: 299 AYSIGKESVFLAISKALGVKIY 320
+++ G E + AI++A I+
Sbjct: 185 SWTWGYEDILKAIAQAFDTPIH 206
>gi|448377620|ref|ZP_21560316.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Halovivax asiaticus JCM 14624]
gi|445655564|gb|ELZ08409.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Halovivax asiaticus JCM 14624]
Length = 335
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 122/300 (40%), Gaps = 61/300 (20%)
Query: 149 LTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTL 208
++H H DH S G + CS TA + V E ++ GV+ L
Sbjct: 33 VSHAHADHTFSS----SPGTVVCSAETAAIATARTGV--------EFDSVSAAPGVE--L 78
Query: 209 LEANHCPGAALIHFRLQDGQCYLHTGDF--RASRLMQSY-PLLVNHRVNVLYLDTTYCNP 265
+ A H G+ DG Y +TGDF R ++ + P ++ V+VL ++TTY +P
Sbjct: 79 VPAGHVVGSRAAVIEAADGTRYCYTGDFSTRDRAYLEGFDPAALD--VDVLVMETTYGHP 136
Query: 266 KYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASR 325
+Y+ P + D+ + + ++ P + + YS+G+ ++ A A+
Sbjct: 137 RYRLPDQADLEASI----HHWIRDHPDRPLFLFGYSLGRAQKLQWLA--------AEATE 184
Query: 326 RRVLQSFDWPELSGNLCTQGNDTLLHVLP-----MSSLKFETL-------------KDYL 367
RR+L S E++ D P +S L+ E L +D++
Sbjct: 185 RRILVSRTIDEVN-RAIESSTDIAFAGEPVDGGSISELQPEALTDEIVVVPSNQSRRDWI 243
Query: 368 KPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
++ A+ A +GW ++ L RG+ + P ++H F EL E V+
Sbjct: 244 DAIADETGALKAGF-SGWAVEDSF---------LYRGDYDVT-FPLTDHCDFDELIETVR 292
>gi|146283202|ref|YP_001173355.1| metallo-beta-lactamase family protein [Pseudomonas stutzeri A1501]
gi|145571407|gb|ABP80513.1| metallo-beta-lactamase family protein [Pseudomonas stutzeri A1501]
Length = 460
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 53/243 (21%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWS---HGPIYCSPLTARLVRMCL------------- 183
S++G A +TH H DH G + + GPI CS +ARL+ + L
Sbjct: 31 SVEGVKALIVTHVHIDHVGRIPNLLAAGFDGPILCSEPSARLLPIVLEDAFRLSISRDQD 90
Query: 184 ------------LVNPSYIHPLELNTEHVIDG--VKVTLLEANHCPGAALIHFRLQDG-- 227
++ Y H LN DG KV L A H G+A + L +G
Sbjct: 91 QLERYLKVVEQRIIALPYDHWFTLNE---TDGRACKVRLQPAGHVLGSAYVELELSEGSD 147
Query: 228 -QCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
Q + +GD A L+ R ++L L++TY + ++ ED + RL
Sbjct: 148 VQRVVFSGDLGAPHSPLLPDLVPPERADLLILESTYGDRRH-----EDRAHRRERLQAAI 202
Query: 287 LKK-QPKTLVVVGAYSIGKESVFLA-----------ISKALGVKIYANASRRRVLQSFDW 334
+ + V++ ++SIG+ L ++A G + A R DW
Sbjct: 203 ERALADQGTVLIPSFSIGRTQELLFELEEILHEKREAAEASGTPVEAPEQARDGDPDIDW 262
Query: 335 PEL 337
P+L
Sbjct: 263 PQL 265
>gi|344996811|ref|YP_004799154.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965030|gb|AEM74177.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 822
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 48/228 (21%)
Query: 143 GCSAYFLTHFHYDHYGGL---GKRWSHGPIYCSPLTARLVRMCLLVNPSYIH------PL 193
G ++H H DH G L + + H Y + T L+++ L + + P+
Sbjct: 50 GVDVCLISHAHLDHIGSLPLIAREYPHIFFYANQPTKDLIKVLLYDSLRIMEIAEDEIPI 109
Query: 194 --ELNTEHVID---------------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
E N E ++D G+KVT A H GA++I + Q+G L+TGDF
Sbjct: 110 YAEKNVEDLLDRTLTYGFNYTFEPIEGIKVTFFPAGHILGASMIFIKTQEGSI-LYTGDF 168
Query: 237 RASRLM----QSYPLLVNHRVNVLYLDTTYCNPKYKFPS--KEDVLNYVVRLTKNCLKKQ 290
A R + S P + R +V+ ++TY + + S +E + N V + K
Sbjct: 169 SADRQLTVDKASVPKI---RPDVVICESTYGDRLHTNRSFEEERLFNTVAEVVSQGGK-- 223
Query: 291 PKTLVVVGAYSIGKESVFLAI------SKALGVKIYANASRRRVLQSF 332
V++ A++IG+ + I + + ++ + R V++ +
Sbjct: 224 ----VLIPAFAIGRAQEIILILRNYMKKRKVSFNVFIDGMVREVIRVY 267
>gi|148675640|gb|EDL07587.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_b [Mus musculus]
Length = 81
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL 184
IP TP VD + +FLTH H DH GL W+ P+YCSP+TA CLL
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITA-----CLL 58
>gi|354567536|ref|ZP_08986705.1| beta-lactamase domain protein [Fischerella sp. JSC-11]
gi|353542808|gb|EHC12269.1| beta-lactamase domain protein [Fischerella sp. JSC-11]
Length = 556
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 132 TVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK---RWSHGPIYCSPLTARLVRMCLLVNPS 188
T A R S F++H H DH GL K + PIY S +T++L+ + L S
Sbjct: 62 TKSARRGSSPLPADFVFVSHAHPDHARGLLKLHQAFPLLPIYASEVTSKLLPLNWLDQDS 121
Query: 189 -----YIHPLELNTE-HVIDGVKVTLLEANHCPGAALIHFRLQDGQ---CYLHTGDF--R 237
+ L L + V DG+ V L A H PGA I F Q L+TGDF
Sbjct: 122 QELSQFCQALPLRSPLEVKDGLVVELFPAGHLPGAVAILFTYTTPQRTYKLLYTGDFFLS 181
Query: 238 ASRLMQSYPL--LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
SRL++ L L +++VL ++ TY ++ P + + N + + + L+
Sbjct: 182 NSRLVEGLRLEELRGLQLDVLIIEGTYGTSRH--PHRRNQENQLAERINRAIADRYSVLM 239
Query: 296 VVGAYSIGKESVFL 309
A +G+E + L
Sbjct: 240 PTPALGLGQELLML 253
>gi|448564220|ref|ZP_21635916.1| metallo-beta-lactamase domain protein [Haloferax prahovense DSM
18310]
gi|445717049|gb|ELZ68773.1| metallo-beta-lactamase domain protein [Haloferax prahovense DSM
18310]
Length = 557
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 26/181 (14%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLLVNPSY------------IH 191
+A LTH H DHY LG HG PIY TAR++ L + +
Sbjct: 55 TAICLTHAHLDHYQSLGTNLGHGPPIYTGDGTARILEDVLETGREHHGFTQTEEVLNRLE 114
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDG---QCYLHTGDFRASRLMQSYP-- 246
P+ T+ ++ G++V + A H PGA F + D + L TGDF +R YP
Sbjct: 115 PITSWTQ-IVPGLRVHPIPAGHTPGATGFLFEVTDDDVRRTILVTGDF-TTRRAAGYPGF 172
Query: 247 -LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVV---RLTKNCLKKQPKTLVVVGAYSI 302
L + V+ L L T N +++ P+ D + ++ R L V AY +
Sbjct: 173 DLDLPVEVDTLVL-TAATNDEFE-PTLTDAIGTILERARAGSTILATASGLTGVQTAYLL 230
Query: 303 G 303
G
Sbjct: 231 G 231
>gi|255532455|ref|YP_003092827.1| mRNA 3-end processing factor [Pedobacter heparinus DSM 2366]
gi|255345439|gb|ACU04765.1| putative mRNA 3-end processing factor [Pedobacter heparinus DSM
2366]
Length = 332
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 150 THFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLL 209
TH H DH +W C LT+ +++ L I L E I+GVK++L
Sbjct: 32 THGHSDHV-----KWGSNAYLCHELTSPILKQRL--GELNIETLPYGKEISINGVKISLF 84
Query: 210 EANHCPGAALIHFRLQDGQCYLHTGDFRASR--LMQSYPLLVNHRVNVLYLDTTYCNPKY 267
A H G+A + + C + +GD++ + + ++ + + N ++T+ P Y
Sbjct: 85 PAGHVIGSAQVRLEYKGEVCVV-SGDYKVTDDGISTAFEPV---KCNTFVSESTFGLPIY 140
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLA 310
K+ ++ +L+ + KQ +++V AYS+GK +A
Sbjct: 141 KWQPQQLILDQIREWISGNQDKQKTSVLV--AYSLGKAQRLVA 181
>gi|154281375|ref|XP_001541500.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411679|gb|EDN07067.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 559
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 139 GSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCLLVNPSYIHPLELNT 197
G ++ A FL+H H DH GL P IYCS T R LL Y H + +
Sbjct: 6 GIVEAPLACFLSHVHSDHLQGLESL--RAPFIYCSAAT----REILLRLEKYPHRINFSK 59
Query: 198 EHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL----MQSYPLLVNHRV 253
+LE+ L L +G+ L+TGD RA + P+L+ + +
Sbjct: 60 ---------GILESRKQHYKHLSKL-LGNGKAILYTGDIRAESWWVDNLIRNPVLIPYTI 109
Query: 254 -----NVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVF 308
+ +YLDTT+ + + + L + TL + ++ G E V+
Sbjct: 110 GSKLLDKIYLDTTFATKSDVYQTFASKAEGIRELLEKVQTYPDNTLFYLRVWTFGYEDVW 169
Query: 309 LAISKALGVKIYANASRRRVLQSFDWPELSG 339
LA+S AL +I+ + + V QS + SG
Sbjct: 170 LALSAALNTRIHVDRYQMGVYQSLATRDASG 200
>gi|325968825|ref|YP_004245017.1| mRNA 3'-end processing factor [Vulcanisaeta moutnovskia 768-28]
gi|323708028|gb|ADY01515.1| mRNA 3'-end processing factor, conjectural [Vulcanisaeta
moutnovskia 768-28]
Length = 433
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 44/232 (18%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRM----CLLVNPSYI----- 190
+ A FL+H H DH G L + S P+Y +PLT L + + ++ Y+
Sbjct: 54 RDIMAVFLSHAHLDHCGALPSLYVSSPPPVYATPLTLELADIMFKDAIKLSGYYLPYEDE 113
Query: 191 -------HPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR--A 238
H + + ID VK T++ A H PG+ L L +G L TGDF +
Sbjct: 114 EIKAVLDHAIPVTYGEDIDISKDVKATIINAGHVPGSMLTLLEL-NGARVLFTGDFNLAS 172
Query: 239 SRLMQSYPL-LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVV 297
S L++ + V V+V+ ++ TY + P +E+V +++ K ++ L+ V
Sbjct: 173 SNLLRGADVNSVPKDVDVVIMEGTYVANTH--PPREEVEREFIKVIKETIESGGSVLIPV 230
Query: 298 GAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTL 349
+IG+ L + +Y N D+P + L N +
Sbjct: 231 --LTIGRAQEIL-------ITLYKNG--------IDYPIIIDGLARLANQIV 265
>gi|58260790|ref|XP_567805.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117269|ref|XP_772861.1| hypothetical protein CNBK2320 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255479|gb|EAL18214.1| hypothetical protein CNBK2320 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229886|gb|AAW46288.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
Length = 758
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 137/361 (37%), Gaps = 91/361 (25%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLV----------------------RMCLL 184
+ L+H H DH GL ++ G I CSP T R++ R L
Sbjct: 55 FLLSHTHADHVVGLTSDFT-GHIICSPDTKRMLLDLEPERERQWLDKGIREIKTKRFGGL 113
Query: 185 VNPSYIHPLELNTEHVI-----------------DGVKVTLLEANHCPGAALIHFRLQDG 227
IH ++ + + +TLL+ANHCPG+ + D
Sbjct: 114 AAKRGIHGKVVDRIEALPYGQPKVFTLGYESEKPQEITITLLDANHCPGSTMFLI-TSDK 172
Query: 228 QCYLHTGDFRA-SRLMQSY---PLLVN------------------HRV-NVLYLDTTYCN 264
+ LHTGD RA +R + S P+L RV + +YLDT
Sbjct: 173 KAVLHTGDVRADTRFIDSLKRNPILQEFLAPASVYQKAKSLVGGGRRVLDRIYLDTAAIL 232
Query: 265 PKYKFPSKEDVLNYVVRLTKNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYANA 323
P KE VL +V++ + P+ T + + G E V +++ K++ +
Sbjct: 233 GTGDMPDKEPVLQELVKI----MGLYPEDTTFFLNTWCFGWEDVIKEVARYFNEKVHVDR 288
Query: 324 SRRRVLQSFDW-PELSGNLCTQGNDTLLHVLP-----MSSLKFETLKDYLKPYGN----- 372
+R++ + P L T ++T H ++ +F+ + KP N
Sbjct: 289 YKRQIYSAVRSDPFLLNCTTTDPHETRFHACERFAKCVACRRFD--DESGKPVYNLNKMI 346
Query: 373 QYAAVLAFRPTGWTYSETVGNQLDLIRPLSRG-----NITIYGVPYSEHSSFTELREFVQ 427
+ ++ + GW S G L + +G NI I P S HSS EL+ V+
Sbjct: 347 VHVNMVEVKQVGWD-SRRQGFMETLFKAAGKGGPWPLNIDI---PISRHSSLPELQSLVK 402
Query: 428 V 428
+
Sbjct: 403 L 403
>gi|296242984|ref|YP_003650471.1| KH-domain/beta-lactamase-domain-containing protein [Thermosphaera
aggregans DSM 11486]
gi|296095568|gb|ADG91519.1| KH-domain/beta-lactamase-domain protein [Thermosphaera aggregans
DSM 11486]
Length = 651
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 43/215 (20%)
Query: 133 VDAFRYGSIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCSPLTARLVRMCL--LVNP 187
VD+ + + G +TH H DH G L K GP+Y + T L+ + L L+
Sbjct: 236 VDSLKLEELDGV---IVTHSHLDHVGLVPILYKYGYRGPLYVTKPTRELMIVMLKDLIEV 292
Query: 188 S-----------------YIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG 227
S +H + + + V D +K+T+ A H G+A++H + G
Sbjct: 293 SRRSGRYLPFTEKDLTTMILHTITVEYDEVTDVAPDIKLTMYNAGHILGSAIVHLHVGMG 352
Query: 228 -QCYLHTGDFR--ASRLMQ----SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVV 280
++TGDF+ ++RL+ +P RV L +++TY + K + ++ + +V
Sbjct: 353 LHNIVYTGDFKYASTRLLDRANTEFP-----RVETLIMESTYGSAKQQ--NRLEAEAELV 405
Query: 281 RLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKAL 315
+ K +++Q L+ V A G+E + L +++A+
Sbjct: 406 NIVKRTVERQGIVLIPVFAVGRGQE-IILILNEAM 439
>gi|350270238|ref|YP_004881546.1| hypothetical protein OBV_18420 [Oscillibacter valericigenes
Sjm18-20]
gi|348595080|dbj|BAK99040.1| hypothetical protein OBV_18420 [Oscillibacter valericigenes
Sjm18-20]
Length = 261
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLG---KRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELN 196
S+ S +TH H DH GL KRWS GP++ S R +R L + P L
Sbjct: 46 SLDDLSGILITHTHTDHIAGLQTLLKRWS-GPVFASEAAGRDLRRRLAGMEGRLSPFMLG 104
Query: 197 TEHVIDGVKVTLLEANH-CPGAALIHFRLQDGQCYLHTGDF--RASRLMQSYPLLV---N 250
+DG V +H PG+A FR+ D TG A+ + PLLV N
Sbjct: 105 ERFTVDGCDVDPFPTSHDAPGSA--GFRIGDFGLLTDTGYVTDEAAYTLSGVPLLVLEAN 162
Query: 251 HRVNVL 256
H V++L
Sbjct: 163 HDVDML 168
>gi|359395126|ref|ZP_09188179.1| Hydroxyacylglutathione hydrolase [Halomonas boliviensis LC1]
gi|357972373|gb|EHJ94818.1| Hydroxyacylglutathione hydrolase [Halomonas boliviensis LC1]
Length = 363
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 134 DAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPL 193
D + + A ++H H DH GG+ + + P+YC+PL A+ L N S++ PL
Sbjct: 40 DTITWANNLNVDAVLISHDHIDHIGGVAELAENVPLYCTPLVAK----ALPHNRSWL-PL 94
Query: 194 ELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRV 253
++G+ VT +A H G +H ++ G Y F SRL +P
Sbjct: 95 PERGTLEVEGITVTTGQAGHSLGGVWLHLAVEGGVFYSGDACFE-SRL---FPFDTPPTA 150
Query: 254 NVLYLDTTY 262
+ LD +Y
Sbjct: 151 RIALLDASY 159
>gi|386021599|ref|YP_005939623.1| metallo-beta-lactamase family protein [Pseudomonas stutzeri DSM
4166]
gi|327481571|gb|AEA84881.1| metallo-beta-lactamase family protein [Pseudomonas stutzeri DSM
4166]
Length = 483
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 53/243 (21%)
Query: 140 SIKGCSAYFLTHFHYDHYGGLGKRWS---HGPIYCSPLTARLVRMCL------------- 183
S++G A +TH H DH G + + GPI CS +ARL+ + L
Sbjct: 54 SVEGVKALIVTHVHIDHVGRIPNLLAAGFDGPILCSEPSARLLPIVLEDAFRLSISRDQD 113
Query: 184 ------------LVNPSYIHPLELNTEHVIDG--VKVTLLEANHCPGAALIHFRLQDG-- 227
++ Y H LN DG KV L A H G+A + L +G
Sbjct: 114 QLERYLKVVEQRIIALPYDHWFTLNE---TDGRACKVRLQPAGHVLGSAYVELELSEGSD 170
Query: 228 -QCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNC 286
Q + +GD A L+ R ++L L++TY + ++ ED + RL
Sbjct: 171 VQRVVFSGDLGAPHSPLLPDLVPPERADLLILESTYGDRRH-----EDRAHRRERLQAAI 225
Query: 287 LKK-QPKTLVVVGAYSIGKESVFLA-----------ISKALGVKIYANASRRRVLQSFDW 334
+ + V++ ++SIG+ L ++A G + A R DW
Sbjct: 226 ERALADQGTVLIPSFSIGRTQELLFELEEILHEKREAAEASGTPVEAPEQARDGDPDIDW 285
Query: 335 PEL 337
P+L
Sbjct: 286 PQL 288
>gi|401411411|ref|XP_003885153.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325119572|emb|CBZ55125.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 1250
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 147 YFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLEL 195
+ L+H H DH GGL RW G I+CSP T RL+ + S + LEL
Sbjct: 247 FLLSHLHADHIGGLHGRWQDGSIFCSPTTRRLLLLRFPALASRVAALEL 295
>gi|126179147|ref|YP_001047112.1| beta-lactamase domain-containing protein [Methanoculleus marisnigri
JR1]
gi|125861941|gb|ABN57130.1| beta-lactamase domain protein [Methanoculleus marisnigri JR1]
Length = 630
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 47/235 (20%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL 184
GTP+ Y + A LTH H DH L K GP+Y + T L M L
Sbjct: 218 GTPYLYVPEIY-PLNTLDAVVLTHAHLDHCALVPLLYKYGYEGPVYSTAPTRDLSTMLQL 276
Query: 185 -------------------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHF 222
V H + LN V D VK+T A H G+A+ HF
Sbjct: 277 DYLDVVRKETDRIPYTSNEVRTYMKHSITLNYGSVTDIAPDVKLTFHNAGHILGSAIAHF 336
Query: 223 RLQDGQCYLH-TGDF--RASRL----MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDV 275
+ +G + TGDF + SRL + S+P R+ L++++TY P +++
Sbjct: 337 HIGEGLYNIAFTGDFNYQKSRLFSPAVSSFP-----RLEALFMESTYGGSNDFQPQRKEA 391
Query: 276 LNYVVRLTKNCLKKQPKTLVVVGAYSIGK-ESVFLAISKAL------GVKIYANA 323
+ + +K+ K V++ A+++G+ + V LA+ + + VKIY +
Sbjct: 392 EDKLYETVSTTIKRGGK--VIIPAFAVGRSQEVMLALEEGIRRQKIPPVKIYLDG 444
>gi|312792978|ref|YP_004025901.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180118|gb|ADQ40288.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 822
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 48/228 (21%)
Query: 143 GCSAYFLTHFHYDHYGGL---GKRWSHGPIYCSPLTARLVRMCLLVNPSYIH------PL 193
G ++H H DH G L + + H Y + T L+++ L + + P+
Sbjct: 50 GVDVCLISHAHLDHIGSLPLIAREYPHIFFYANQPTKDLIKVLLYDSLRIMEIAEDEIPI 109
Query: 194 --ELNTEHVID---------------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
E N E ++D G+KVT A H GA++I + Q+G L+TGDF
Sbjct: 110 YAEKNVEDLLDRTLTYGFNYTFEPIEGIKVTFFPAGHILGASMIFIQTQEGSI-LYTGDF 168
Query: 237 RASRLM----QSYPLLVNHRVNVLYLDTTYCNPKYKFPS--KEDVLNYVVRLTKNCLKKQ 290
A R + S P + R +V+ ++TY + + S +E + N V + K
Sbjct: 169 SADRQLTVDKASVPKI---RPDVVICESTYGDRLHTNRSFEEERLFNTVAEVVSQGGK-- 223
Query: 291 PKTLVVVGAYSIGKESVFLAI------SKALGVKIYANASRRRVLQSF 332
V++ A++IG+ + I + + ++ + R V++ +
Sbjct: 224 ----VLIPAFAIGRAQEIILILRNYMKKRKVSFNVFIDGMVREVIRVY 267
>gi|315231930|ref|YP_004072366.1| polyadenylation specificity factor-like protein [Thermococcus
barophilus MP]
gi|315184958|gb|ADT85143.1| polyadenylation specificity factor-like protein [Thermococcus
barophilus MP]
Length = 648
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 49/219 (22%)
Query: 131 FTVDAFRYGSIKGC-SAYFLTHFHYDHYGGLGKRWSH----GPIYCSPLTARLVRMCL-- 183
F FRY +G A +TH H DH G L + + GPIY +P T L+ +
Sbjct: 232 FDAPEFRYVLNEGLLDAIIITHAHLDHSGLLPYLFRYNLFDGPIYTTPPTRDLMVLLQKD 291
Query: 184 ------------LVNPSYI-----HPLELNTEHVID---GVKVTLLEANHCPGAALIHFR 223
L P I H + L+ V D +++TL A H G+A++H
Sbjct: 292 FIEIQQSNGAEPLYKPKDIKEVVKHTITLDYGEVRDISPDMRLTLHNAGHILGSAIVHLH 351
Query: 224 LQDGQCYLH----TGDFR--ASRLMQ----SYPLLVNHRVNVLYLDTTYCNPK-YKFPSK 272
+ +G LH TGDF+ +RL + +P R+ L +++TY Y+ P +
Sbjct: 352 IGNG---LHNVAVTGDFKFIPTRLFEPANARFP-----RLETLIMESTYGGSNDYQMP-R 402
Query: 273 EDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAI 311
ED ++ + +K++ K V++ A ++G+ + +
Sbjct: 403 EDAEKKLIEVIHQTIKRKGK--VLIPAMAVGRAQEIMMV 439
>gi|399578592|ref|ZP_10772339.1| metallo-beta-lactamase domain protein [Halogranum salarium B-1]
gi|399236478|gb|EJN57415.1| metallo-beta-lactamase domain protein [Halogranum salarium B-1]
Length = 561
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID- 202
+A LTH H DHY LG HG PIY TAR++ L + H L TE V+D
Sbjct: 55 TAICLTHAHLDHYQSLGANLDHGPPIYTGVDTARILEDVLETGREH-HGLT-RTEEVLDR 112
Query: 203 ------------GVKVTLLEANHCPGAALIHFRLQDG---QCYLHTGDFRASRLMQSYP- 246
G++V + A H PGA F + D + L TGDF +R YP
Sbjct: 113 LEPVATWMQIAPGLRVHPVPAGHTPGAIGFLFEVTDNDVRRTILVTGDF-TTRRAAGYPG 171
Query: 247 --LLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVR 281
L + V+ L L T N +++ P+ D + ++
Sbjct: 172 FALDLPVDVDTLVL-TAATNDEFE-PTLTDAIGTILE 206
>gi|119719363|ref|YP_919858.1| beta-lactamase domain-containing protein [Thermofilum pendens Hrk
5]
gi|119524483|gb|ABL77855.1| beta-lactamase domain protein [Thermofilum pendens Hrk 5]
Length = 428
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 29/209 (13%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRWSHG--PIYCSPLTARL----VRMCLLVNPSYIH---- 191
KG A ++H H DH G + G P+ +PLTA L ++ + ++ YI
Sbjct: 55 KGIHAVAISHAHLDHSGAAPLLYVSGQPPLISTPLTATLSDLLIKDFMKLSKYYIPYEAP 114
Query: 192 ----------PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRA--S 239
PL + I V + +L+A H PG+A+I L+TGD+ +
Sbjct: 115 EVEKMLESLVPLGYGESYDIGSVTIRVLDAGHIPGSAMIQIETPSLNV-LYTGDYSLHDT 173
Query: 240 RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
L++ + + +V+ +++TY +Y P +E+V V+ ++ + + A
Sbjct: 174 CLLRGAGISEFSKADVVIMESTYA--EYDHPPREEVEREFVKTVLEVVED--GGIAFIPA 229
Query: 300 YSIGKESVFLAISKA--LGVKIYANASRR 326
+++G+ L + L V IY + R
Sbjct: 230 FAVGRAQEILCVLAKYDLQVPIYVDGMAR 258
>gi|209525357|ref|ZP_03273898.1| beta-lactamase domain protein [Arthrospira maxima CS-328]
gi|423065640|ref|ZP_17054430.1| beta-lactamase domain protein [Arthrospira platensis C1]
gi|209494208|gb|EDZ94522.1| beta-lactamase domain protein [Arthrospira maxima CS-328]
gi|406712830|gb|EKD08008.1| beta-lactamase domain protein [Arthrospira platensis C1]
Length = 567
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 150 THFHYDHYGGL---GKRWSHGPIYCSPLTARLV------RMCLLVNPSYIHPLELNTE-H 199
+H H DH GL + PIY S +T++L+ + P + PL L TE
Sbjct: 87 SHAHADHVRGLLALHESCPELPIYASDVTSQLLPINWPEELSSGQMPKFCQPLPLRTEVR 146
Query: 200 VIDGVKVTLLEANHCPGAALIHFRLQ-DGQCY--LHTGDF--RASRLMQSYPL--LVNHR 252
+ +G+ +TL A H PGA + + + Y +TGDF SRL++ PL L +
Sbjct: 147 LKEGLSITLFPAGHLPGATCMLLKYNAPNRTYKLFYTGDFFLSNSRLVEGLPLGELRGLK 206
Query: 253 VNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFL 309
+VL L+ +Y +Y P + + N + + L+ A +G+E + L
Sbjct: 207 PDVLILEGSYGTARY--PHRRQLENQLAERIYRAIASGYSVLIPTPALGLGQELLML 261
>gi|410214258|gb|JAA04348.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 577
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ + + +YLDT C+P+ Y+ PS+E+ L+ V+ L +
Sbjct: 17 LYTGDFRLVQGEAARMELLHSGGRVKDIQSVYLDTMLCDPRFYQIPSREECLSGVLELVQ 76
Query: 285 NCLKKQPKTLVVVGAYSI-GKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGNLC 342
+ + + +V + + G E +F +S+ LGV+++ N L F + PE+ +L
Sbjct: 77 SWITRSLYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNK-----LDMFRNMPEILHHLT 131
Query: 343 TQGNDTL---LHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRP-TGWTYSETVGNQLDLI 398
T N + H ++ L + +++ +P T W G +
Sbjct: 132 TDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW-----FGERSRKT 186
Query: 399 RPLSRGNITIYGVPYSEHSSFTELREFV 426
+ R + Y +S HSS++E+++F+
Sbjct: 187 NVIVRTGESSYRACFSFHSSYSEIKDFL 214
>gi|389843051|ref|YP_006345131.1| exonuclease [Mesotoga prima MesG1.Ag.4.2]
gi|387857797|gb|AFK05888.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Mesotoga prima MesG1.Ag.4.2]
Length = 443
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 141 IKGCSAYFLTHFHYDHYGGL---GKRWSHGPIYCSP----LTARLVRMCLLVNPS----- 188
I ++H HYDH L +RW + PI + L R+++ + V
Sbjct: 48 INDLDVIMISHSHYDHLSSLPYISQRWPNAPILMAQENKGLALRILQNSVEVMKKKNAKD 107
Query: 189 -----------------YIHPLELNTEHVIDG-VKVTLLEANHCPGAALIHFRLQDGQCY 230
I+P+E + ID V V L A H GAA I F G+
Sbjct: 108 GVEPILYNHGEVNELKRRIYPMEYFQRYSIDDVVDVALYPAGHVMGAASI-FLEHRGRRI 166
Query: 231 LHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
L++GD S+ + P + +V L + TY + + ++ + + + K L+
Sbjct: 167 LYSGDISLSQQLTIPPAQLPKKVETLISEGTYGAKENQLLTRYSEIERLSKSVKRVLENG 226
Query: 291 PKTLVVVGAYSIGKESVFLAI-----SKALGVKIYANA 323
+ L+ V A G+E++++ + K V IY N
Sbjct: 227 GRILMPVFALGRGQEAIYMLLMLMEKKKIPSVPIYTNG 264
>gi|330835782|ref|YP_004410510.1| RNA procession exonuclease-like protein [Metallosphaera cuprina
Ar-4]
gi|329567921|gb|AEB96026.1| RNA procession exonuclease-like protein [Metallosphaera cuprina
Ar-4]
Length = 328
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 124/319 (38%), Gaps = 62/319 (19%)
Query: 128 GTPFTVD-----AFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMC 182
G FTVD AFR +THFH DH L + + CS + A +
Sbjct: 14 GENFTVDGHWKRAFR----------VVTHFHSDHIIQLNRSVTE----CSWIIATKPTLD 59
Query: 183 LLVNPSYIHP----LEL--NTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+L Y P LEL N I+ K+TL ++H G+A + +G+ +TGDF
Sbjct: 60 VLNTLGYTIPKNKRLELGYNVTINIESEKLTLHPSDHVFGSAQVEVTTLNGETIAYTGDF 119
Query: 237 RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTL-- 294
+ + P+L ++L +++TY P++ K++V L K P +
Sbjct: 120 KNP--GKGTPIL---DPDILIIESTYGKPEFTRKFKDEVEQLTADYINEALTKLPVRIYG 174
Query: 295 -------VVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND 347
++ G + F+ K + + A ++ R+ F + + N
Sbjct: 175 YHGKIQEIMKRLREHGIIAPFVVDGKIMEITQVAISNGMRIDDVFSVEQAKEQGIIKDN- 233
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNIT 407
+ L F K + + N F +GW + P+ R + +
Sbjct: 234 -----WYIEFLHFNQFKKRISKFTN-------FLLSGWEFET----------PIRRIDKS 271
Query: 408 IYGVPYSEHSSFTELREFV 426
YG+ +S+H+ F +L +V
Sbjct: 272 SYGIAFSDHADFEDLIYYV 290
>gi|395330876|gb|EJF63258.1| hypothetical protein DICSQDRAFT_160484 [Dichomitus squalens
LYAD-421 SS1]
Length = 1105
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 139/392 (35%), Gaps = 99/392 (25%)
Query: 120 CPFYKKIPGTPFTVDAFR---------YGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIY 170
P+ IP P VD F G K + Y LTH H DH GL R +
Sbjct: 5 TPYNAFIPPYPIRVDQFTDPALSTHSFSGREKTANLYLLTHTHTDHLIGLSARSFAQTVV 64
Query: 171 CS---------------------PLTARLVRMC--LLVNP-------------------S 188
CS L A VR L V P +
Sbjct: 65 CSHDAKEMLLRHQVYAERALRDAELRAENVRAFSHLRVEPQRMDDGSVDYAGSRDLLRAT 124
Query: 189 YIHPLELNTEHVIDG---VKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL---- 241
+IH L T +++ V +TLL+ANHCPGA + G LHTGD RA L
Sbjct: 125 HIH---LPTRFILNNEEDVTITLLDANHCPGAVMFLVEGAKG-TVLHTGDLRAEPLFLEN 180
Query: 242 MQSYPLL--------------VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCL 287
++ P + V ++ +YLDT Y+ P K + LT
Sbjct: 181 LKRNPYIQRYVHNPRSSSSAHVLSTLDAIYLDTACLLNDYEVPPK---VEAAAGLTGLMA 237
Query: 288 KKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGND 347
T + ++ G E ++ A+++ I+ + + V + +SG+ Q
Sbjct: 238 LYPSTTRFFLNLWTWGYEDIYKAVAQRFDTTIHVDRYKHSV-----YAHISGDPFLQ--- 289
Query: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGW--TYSETVGNQL--------DL 397
++ SS +F + + + + + P+G Y V + +
Sbjct: 290 -MIVTRDESSTRFHACERFERCEHVRVVGRESHTPSGHHVVYVNPVNMDVNSWQRYLQET 348
Query: 398 IRPLSRG-NITIYGVPYSEHSSFTELREFVQV 428
L RG + + VP + HS+ ELR V +
Sbjct: 349 REQLQRGKQVNVLLVPLARHSTLPELRNLVSL 380
>gi|352106009|ref|ZP_08961120.1| beta-lactamase [Halomonas sp. HAL1]
gi|350598101|gb|EHA14225.1| beta-lactamase [Halomonas sp. HAL1]
Length = 363
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 134 DAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPL 193
D + + A ++H H DH GG+ + + P+YC+PL A+ L HPL
Sbjct: 40 DTISWANNLDIDAVLISHDHIDHIGGVAELAENVPLYCTPLVAK-----SLPKNRLWHPL 94
Query: 194 ELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
++G+ VT +A H G +H ++ G Y +GD
Sbjct: 95 PERGSIEVEGITVTTGQAGHSLGGVWLHLAVEGGVFY--SGD 134
>gi|434404212|ref|YP_007147097.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Cylindrospermum stagnale PCC 7417]
gi|428258467|gb|AFZ24417.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Cylindrospermum stagnale PCC 7417]
Length = 551
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 148 FLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLLVN-----PSYIHPLELNTE- 198
++H H DH G L K + PIY S +T++L+ + L N PS+ L L +
Sbjct: 73 LISHAHPDHARGSLALHKAFPLLPIYASEVTSKLLPLNWLDNDPEEIPSFCQALPLRSPV 132
Query: 199 HVIDGVKVTLLEANHCPGAA---LIHFRLQDGQCYLHTGDF--RASRLMQSYPL--LVNH 251
+ DG+ V L A H PGA L + + L+TGDF SRL++ L L
Sbjct: 133 ELQDGLVVELFPAGHLPGAVAILLTYTTPERAYKLLYTGDFFLSNSRLVEGLRLEELRGL 192
Query: 252 RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFL 309
++VL ++ TY ++ P + + N + + L+ A +G+E + L
Sbjct: 193 ELDVLIIEGTYGTSRH--PHRRNQENQLAERINRAIADHCSVLMPTPALGLGQELLML 248
>gi|305663563|ref|YP_003859851.1| hypothetical protein [Ignisphaera aggregans DSM 17230]
gi|304378132|gb|ADM27971.1| conserved hypothetical protein [Ignisphaera aggregans DSM 17230]
Length = 340
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 139 GSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVRMCLLVNPSYIHPLELNT 197
G GC +TH H DH + + + I SP+T ++ + L N +LN
Sbjct: 23 GHHNGCLYRVVTHIHADHTIHIDRSITASRYIIASPITLEML-LALGYNIPKSKSFKLNY 81
Query: 198 EHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVN 254
+ VID G K+ ++A H PG + + +D +T DF++ + ++ + V+
Sbjct: 82 DEVIDFYDGSKLRFVKAEHIPGTTQVLYEDKD-IVVAYTSDFKSPG--RGTEIIAD--VD 136
Query: 255 VLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTL 294
VL +D TY +P++ ++ + + V+L + + P L
Sbjct: 137 VLVIDATYGDPRFSRADEDVIWSEFVKLVRKLMSMGPIAL 176
>gi|408404164|ref|YP_006862147.1| beta-lactamase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364760|gb|AFU58490.1| beta-lactamase domain protein [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 700
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 95/250 (38%), Gaps = 55/250 (22%)
Query: 114 KIVDRSCPFYKKIPGTPFTVD-AFRYGSIKGCSAY----------------FLTHFHYDH 156
K V RSC F P + +D G + G +AY + H H DH
Sbjct: 255 KQVGRSC-FIVVTPESKVMLDCGINPGEMSGLNAYPRLDWFNFDLDDLDAVIIGHAHIDH 313
Query: 157 YG---GLGKRWSHGPIYCSPLTARLVRMCLL-------VNPSYIHPLELNTEHVID---- 202
G L K GP+YC+ T L+ + + N +Y+ + VI
Sbjct: 314 QGFLPALFKYGYKGPVYCTEPTLPLMTLLQMDSVKIANSNGTYLPYEARDVNEVIKHCIT 373
Query: 203 -----------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR--LMQS----Y 245
+ +TL A H G+A +H + L++GD++ +R L+ S Y
Sbjct: 374 LPYGKPTDISPDITITLQNAGHIMGSATVHLNISGAHNILYSGDYKYARTQLLDSAVSMY 433
Query: 246 PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKE 305
P RV L ++TY N P ++ V L + K L+ V A +E
Sbjct: 434 P-----RVETLITESTYGNTTDVMPDQQVVYRSFTESINKTLIEGGKVLIPVPAVGRAQE 488
Query: 306 SVFLAISKAL 315
+ L ++K +
Sbjct: 489 -IMLVMAKEM 497
>gi|297526338|ref|YP_003668362.1| hypothetical protein Shell_0331 [Staphylothermus hellenicus DSM
12710]
gi|297255254|gb|ADI31463.1| conserved hypothetical protein [Staphylothermus hellenicus DSM
12710]
Length = 357
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 108 TATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG 167
+ + L K VD + G F +D F ++ ++H HYDH GL +
Sbjct: 6 SISELLKYVDILGDTSAIVVGESFAIDGFAEKPVR-----VISHAHYDHIVGLKDSILYS 60
Query: 168 P-IYCSPLTARLV--------RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAA 218
I +P T L+ R ++ + + L E+ G K+ L+ ++H G+A
Sbjct: 61 KQIVATPPTHDLILTLGYVGGRELRMLYKNKMVRLNYYEEYTYGGEKLVLIPSHHIIGSA 120
Query: 219 LIHFRLQDGQCYLHTGDFRA---SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDV 275
+ + D + +TGDF+ +++M +++L +++TY +P Y+ P K +V
Sbjct: 121 QVLIEIGDLRIG-YTGDFKLGENTKIMDG--------LDILIIESTYGDPSYRRPFKNEV 171
Query: 276 LNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVK 318
+ +V + + L+ K VV+ Y GK + I + GVK
Sbjct: 172 EDLLVDIVLDGLEMYGK--VVIFGYH-GKIQEAMQILRRNGVK 211
>gi|159042543|ref|YP_001541795.1| beta-lactamase domain-containing protein [Caldivirga maquilingensis
IC-167]
gi|157921378|gb|ABW02805.1| beta-lactamase domain protein [Caldivirga maquilingensis IC-167]
Length = 422
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 130/336 (38%), Gaps = 55/336 (16%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCL--LVNPS--------- 188
+ SA L+H H DH G L + + P+Y +PLTA L + V S
Sbjct: 50 RDLSAVVLSHAHLDHCGALPGLYISASPPLYATPLTAELAEIMFKDTVKLSGYYLPYEEE 109
Query: 189 -------YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR- 240
++P+ N ++G +T L A H PG+ + + DG L TGDF S+
Sbjct: 110 EVRNTLRRVNPVNFNDTVNLNGDSLTFLNAGHVPGSMMTLLNI-DGFRILFTGDFNLSQS 168
Query: 241 --LMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVG 298
L + + ++++ ++ TY + P +E + + K L + V++
Sbjct: 169 NLLNGADVYSIPRDIDLVVMEATYAGGTH--PPREKLEEEFINAVKTTLDEGGS--VLIP 224
Query: 299 AYSIGK-ESVFLAISK--ALGVKIYANASRR---RVLQSFDW----PELSGNLCT----- 343
+++IG+ + + L + K V IY + R R++ + P L T
Sbjct: 225 SFTIGRTQELLLTLIKHNITDVPIYIDGLARIANRIISKYPQFLRDPNLYAKAITYSSEV 284
Query: 344 QGN--------DTLLHVLPMSSLKFETLKDYLKPYGN--QYAAVLAF--RPTGWTYSETV 391
GN D + + P LK YLK G + A +L P Y
Sbjct: 285 MGNYYRKNALRDQAVIITPAGMLKGGAAVYYLKRLGGDRRNAVILPSYQAPDSPGYELLT 344
Query: 392 GNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+ + R N +Y +S HS EL F+
Sbjct: 345 KGVVKVDNEEIRVNAKVYWFDFSAHSGLEELINFIS 380
>gi|254430995|ref|ZP_05044698.1| exonuclease involved in mRNA processing [Cyanobium sp. PCC 7001]
gi|197625448|gb|EDY38007.1| exonuclease involved in mRNA processing [Cyanobium sp. PCC 7001]
Length = 348
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 14/171 (8%)
Query: 148 FLTHFHYDHY-GGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKV 206
+TH H DH G G+ W+ G + ++R L + + P+E + + G +V
Sbjct: 35 LITHAHADHARPGCGEYWAIG------ASETILRQRLGSGITLL-PVEYDQTLRLGGARV 87
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPK 266
+ A H G+A I G+ +L +GD++ P R +V + T+ P
Sbjct: 88 SFHSAGHVLGSAQIRLE-AGGESWLVSGDYKRCADPSCTPF-TPVRADVFITEATFGLPI 145
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGV 317
Y++ S DV R ++ + P+ ++ AY+ GK LA A+GV
Sbjct: 146 YRWQSGADV----ARQIRSWWQAAPERPSLLFAYAFGKAQRLLAELHAIGV 192
>gi|126458658|ref|YP_001054936.1| beta-lactamase domain-containing protein [Pyrobaculum calidifontis
JCM 11548]
gi|126248379|gb|ABO07470.1| beta-lactamase domain protein [Pyrobaculum calidifontis JCM 11548]
Length = 634
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 146 AYFLTHFHYDHYGGLGKRWSH---GPIYCSPLTARLVRMCLL------------------ 184
A LTH H DH G L + + GP+Y + T + L+
Sbjct: 227 AVVLTHAHMDHVGCLPLLYKYGYRGPVYATDPTKYQAYILLMDYVELKEREGGLPSFSRA 286
Query: 185 -VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFR-- 237
V H + L+ E V D +K+T +A H G+A+ H + +G+ L+TGDF+
Sbjct: 287 DVEAVIYHTITLDYEEVTDITPDIKLTFYDAGHEIGSAMAHLHIGNGRYNILYTGDFKYG 346
Query: 238 ASRLMQSYPLLVN--HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLV 295
+RL+ VN RV +L +++TY P + + N + + + K K L
Sbjct: 347 KTRLLNR---AVNKFKRVEMLIMESTYGGRDDVQPPRVEAENALAKHVAETVAKGGKVL- 402
Query: 296 VVGAYSIGKESVFLAI 311
+ A+S G+ L I
Sbjct: 403 -IPAFSTGRGQEILYI 417
>gi|387790301|ref|YP_006255366.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Solitalea canadensis DSM 3403]
gi|379653134|gb|AFD06190.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Solitalea canadensis DSM 3403]
Length = 343
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 148 FLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVT 207
+TH H DH RW + ++RM L S I +E E I+GVK +
Sbjct: 33 IITHAHSDH-----ARWGCKHYLAHKDSEAILRMRLGETIS-IQTVEYGEEFTINGVKFS 86
Query: 208 LLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY 267
L A H G+A + Q G ++ +GD++ S P + + N ++T+ P Y
Sbjct: 87 LHPAGHIIGSAQVRVEHQ-GNVWVASGDYKLQDDHFSAP-FESVKCNAFITESTFGLPIY 144
Query: 268 KFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANAS 324
K+ ++ V++ + + + Q KT V++G Y++GK + + ++A+ +
Sbjct: 145 KWQPQQMVMDEIKEWWQQN-RLQGKTSVLMG-YALGKMQRLIKNLQPFEAPVFAHGA 199
>gi|417321137|ref|ZP_12107677.1| hypothetical protein VP10329_01640 [Vibrio parahaemolyticus 10329]
gi|328471817|gb|EGF42694.1| hypothetical protein VP10329_01640 [Vibrio parahaemolyticus 10329]
Length = 449
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 141 IKGCSAYFLTHFHYDHYGGLGKRWS---HGPIYCSPLTARLVRMCLLVNPSYIHPLELN- 196
+K A LTH H DH G L + GPIYC+ TA LV L++ L LN
Sbjct: 61 VKHIKALVLTHAHIDHIGRLPWLLAAGFKGPIYCTKATAELV--PLMLEDGLKLQLGLNF 118
Query: 197 --TEHVIDGVKVTL-------------------LEANHCPGAALIHFRLQDGQCYLHTGD 235
+ V++ +K L A H G+A + F+L + + + +GD
Sbjct: 119 HQRQQVLNVIKKQLRLHDYQQWLPLGKQCYLRFQPAGHILGSAYVEFKLPNNEIIVFSGD 178
Query: 236 FRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYK-FPSKEDVLNYVVRLTKNCLKKQPKTL 294
S R + L++++TY N +++ ++ + LN ++ + L Q +
Sbjct: 179 LGPSNTPLLPDPKPPKRADHLFIESTYGNKEHEDIATRTERLNTII---DHAL--QDGGV 233
Query: 295 VVVGAYSIGKESVFL 309
+++ A+S+G+ L
Sbjct: 234 ILIPAFSVGRTQELL 248
>gi|126465383|ref|YP_001040492.1| hypothetical protein Smar_0475 [Staphylothermus marinus F1]
gi|126014206|gb|ABN69584.1| conserved hypothetical protein [Staphylothermus marinus F1]
Length = 357
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 134/326 (41%), Gaps = 61/326 (18%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR-WSHGPIYCSPLTARLVRMCLL 184
I G F +D F ++ ++H HYDH GL + I +P T L+ +
Sbjct: 24 IVGENFAIDGFAEKPVR-----VISHAHYDHIVGLKDSIYYSKQIVATPATHDLIIILGY 78
Query: 185 VNPSYIHPLELNT--------EHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
+ + L N E++ K+ L+ ++H G+A + D + +TGDF
Sbjct: 79 IGGRELRMLYKNKMVRLNYYEEYIYGKEKLVLVPSHHIIGSAQVLIETNDLRIG-YTGDF 137
Query: 237 RA---SRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
+ +++M +++L +++TY +P Y+ P K +V + +V + + L+ K
Sbjct: 138 KLGENTKIMDG--------LDILIIESTYGDPSYRRPFKNEVEDLLVDIVLDGLEIYGK- 188
Query: 294 LVVVGAYSIGKESV-----------FLAISKALGVKIYANASRRRVLQSFDWPELSGNLC 342
+V+ G + +E++ FL + V A + + ++ L G
Sbjct: 189 VVIFGYHGKIQEAMQILRRNGVREPFLMPKRIYEVTRIAEKYGYEIGEYYNMRSLEGREI 248
Query: 343 TQGNDTLLHVLPMSSLKFETL-KDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPL 401
+ N +L FE K + GN ++ +GW + E P+
Sbjct: 249 LKSNRYIL---------FEHFNKARHRRLGNNTLYIVL---SGWEFDE----------PI 286
Query: 402 SRGNITIYGVPYSEHSSFTELREFVQ 427
+ + + V S+H+ F EL E+V+
Sbjct: 287 KKLDRYTWLVALSDHADFDELIEYVE 312
>gi|327401049|ref|YP_004341888.1| KH-domain/beta-lactamase-domain-containing protein [Archaeoglobus
veneficus SNP6]
gi|327316557|gb|AEA47173.1| KH-domain/beta-lactamase-domain protein [Archaeoglobus veneficus
SNP6]
Length = 634
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 40/205 (19%)
Query: 144 CSAYFLTHFHYDHYG---GLGKRWSHGPIYCSPLTARLVRMCLL--------------VN 186
A +TH H DH G L K GPIY +P T L+ + L
Sbjct: 233 IDAVVITHAHLDHCGLVPILYKYGYKGPIYMTPPTRDLMVLLQLDFIEVAAREGTPTPYE 292
Query: 187 PSYI-----HPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQCYLH-TGDFR 237
SYI H + L+ V D V++T A H G+A+ HF + +G + TGDF+
Sbjct: 293 SSYIREALKHTIPLDYGVVTDISPDVRLTFYNAGHILGSAIAHFHIGEGLYNIAFTGDFK 352
Query: 238 ASRLM------QSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQP 291
R ++P R+ L ++ TY + P++ + ++ + LK
Sbjct: 353 FERTRLFDRAETNFP-----RLEALIMEATYGGSQDFQPTRREAEEKLISIINETLKNGG 407
Query: 292 KTLVVVGAYSIGK-ESVFLAISKAL 315
K V++ +++G+ + V +A+ +A+
Sbjct: 408 K--VLIPTFAVGRSQEVMIALEEAI 430
>gi|358395254|gb|EHK44641.1| hypothetical protein TRIATDRAFT_292345 [Trichoderma atroviride IMI
206040]
Length = 641
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 37/230 (16%)
Query: 133 VDAFRY-GSIKGCSAYFLTHFHYDHYGGLGKRWSHGP-IYCSPLTA----RLVRMCLLVN 186
+D FR+ I SA FL+H H DH GL S P +YCS T RL R +N
Sbjct: 16 IDYFRHHDGISPPSACFLSHVHTDHLAGLETLRS--PFVYCSAATREILLRLERYPCRIN 73
Query: 187 PSYIHPLELNTEHVIDGVKVTLLEANH-CPGAALIHFRLQ--------------DGQCYL 231
S LE + KV + NH ++ +H ++ G+ L
Sbjct: 74 YSK-GILEARQQTYKHLSKVIVCPPNHGLEISSWLHSSMRITALALSCSVIIEGQGKAIL 132
Query: 232 HTGDFRAS----RLMQSYPLLVNHRVNVLYLDTTYCNPKYK----FPSKEDVLNYVVRLT 283
+TGD R + P L+ + + LDT Y + + F +K + + ++R
Sbjct: 133 YTGDVRCEPWFVNTIARNPTLIEYTCGIKTLDTIYLDTSFTDNVPFQTKAEGIAELLRK- 191
Query: 284 KNCLKKQPK-TLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSF 332
+ + PK T+ + +++ G E V++A+SKAL I+ + + R+ S
Sbjct: 192 ---VAQYPKDTVFHIQSWTYGYEDVWIALSKALNSPIHVDDYKLRIFSSL 238
>gi|240103777|ref|YP_002960086.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein
[Thermococcus gammatolerans EJ3]
gi|239911331|gb|ACS34222.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein
[Thermococcus gammatolerans EJ3]
Length = 651
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 49/219 (22%)
Query: 131 FTVDAFRYGSIKGC-SAYFLTHFHYDHYGGLGKRWSH----GPIYCSPLTARLVR----- 180
F FRY +G A +TH H DH G L + + GPIY +P T L+
Sbjct: 235 FDAPEFRYVLDEGLLDAIIITHAHLDHSGMLPYLFRYKLFDGPIYTTPPTRDLMTLLQQD 294
Query: 181 ---------MCLLVNPSYI-----HPLELNTEHVID---GVKVTLLEANHCPGAALIHFR 223
M L P I H + L+ V D +++TL A H G+A++H
Sbjct: 295 FIEIQHMNGMEPLYRPRDIKEVIKHTITLDYGEVRDIAPDIRLTLHNAGHILGSAIVHLH 354
Query: 224 LQDGQCYLH----TGDFR--ASRLMQ----SYPLLVNHRVNVLYLDTTYCNPK-YKFPSK 272
+ +G LH TGDF+ +RL++ +P RV L +++TY Y+ P +
Sbjct: 355 IGNG---LHNIAITGDFKFIPTRLLEPAVSRFP-----RVETLVMESTYGGSNDYQMP-R 405
Query: 273 EDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAI 311
++ ++ + + +K+ K V++ A ++G+ + +
Sbjct: 406 DEAEKRLIEVIHHTIKRGGK--VLIPAMAVGRAQEIMMV 442
>gi|427418095|ref|ZP_18908278.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Leptolyngbya sp. PCC 7375]
gi|425760808|gb|EKV01661.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Leptolyngbya sp. PCC 7375]
Length = 559
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 146 AYFLTHFHYDHYGGLG---KRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID 202
A F +H H DH L +RW PIY + T L+ LL + I P + E + D
Sbjct: 66 AVFCSHAHVDHGRSLNLLKQRWPQVPIYATAGTVALLEDRLLADSIQILPWRMPIE-LAD 124
Query: 203 GVKVTLLEANHCPGAALIHFR-LQDGQCY--LHTGD--FRASRLMQSYPLLVNHRVNVLY 257
+ V L A H PGAA F QD + Y +TGD ++RL+ PL +N
Sbjct: 125 NLTVELWPAGHLPGAACNLFTYTQDSRTYKIFYTGDCFLSSTRLVDGLPLAALRGLNPDV 184
Query: 258 LDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFL 309
L +P++ + ++ ++ L + + V +G+E + L
Sbjct: 185 LIVEGSLGATCYPNRRQQEHQLIERLRSHLDQLRCVVFPVPMLGLGQELLML 236
>gi|400760106|ref|YP_006589709.1| hypothetical protein PGA2_239p1220 [Phaeobacter gallaeciensis 2.10]
gi|398655578|gb|AFO89547.1| hypothetical protein PGA2_239p1220 [Phaeobacter gallaeciensis 2.10]
Length = 355
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 141 IKGCSAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLLVNPSYIHPLELNTEH 199
++G A F+TH H DH GG G PIY + TA+ L + +H L +
Sbjct: 46 LEGAEAVFITHDHIDHIGGASYAVEAGLPIYATAQTAK-----ALPPAAKVHLLPEQGQT 100
Query: 200 VIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
VIDGV +T H G HF L +G + ++GD+
Sbjct: 101 VIDGVTLTTGRNGHAMGGVWFHFDLGEG--FYYSGDW 135
>gi|424811901|ref|ZP_18237141.1| putative metal-dependent Rnase [Candidatus Nanosalinarum sp.
J07AB56]
gi|339756123|gb|EGQ39706.1| putative metal-dependent Rnase [Candidatus Nanosalinarum sp.
J07AB56]
Length = 619
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 29/198 (14%)
Query: 141 IKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL--VNPSY------ 189
I A L+H H DH G L + GP+YC+ T L+ M L ++ S+
Sbjct: 222 IPALDAVVLSHAHMDHMGMIPYLYRMGYDGPLYCTAPTRDLMIMQTLDYIDISHSEQASA 281
Query: 190 --------------IHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDG-QCYLHTG 234
I P V +K+TL + H G++++H + DG L+TG
Sbjct: 282 PYESKHIKQAVKRTITPEYGKVTDVAPDIKLTLRNSGHIIGSSIVHMHIGDGLHNLLYTG 341
Query: 235 DFRASRLMQSYPLLVN-HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKT 293
D+ P + HRV + ++TY + + + K L K K
Sbjct: 342 DYNYDDSHMLRPASTDFHRVETVITESTYGGRDDEQQPRNQAQKQFLSKMKQTLAKGGK- 400
Query: 294 LVVVGAYSIGKESVFLAI 311
V+V A+++G+ L +
Sbjct: 401 -VIVPAFAVGRSQEILGV 417
>gi|383320534|ref|YP_005381375.1| metal-dependent RNAase-like protein [Methanocella conradii HZ254]
gi|379321904|gb|AFD00857.1| metal-dependent RNAase-like protein [Methanocella conradii HZ254]
Length = 637
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 33/217 (15%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHG---PIYCSPLTARLVRMCLL 184
GTP+ + + A LTH H DH G + + +G P+Y +P T L+ + L
Sbjct: 220 GTPY-LYVPEVSPLSSIDAVVLTHAHLDHSGMIPLLFKYGYDGPVYMTPPTRDLMALLQL 278
Query: 185 -------------------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHF 222
+ + H + LN V D +++T + H G+A+ HF
Sbjct: 279 DYIEVANREGKRPPYDSAMIRETLKHTITLNYGDVTDIAPDIRLTFYNSGHILGSAIAHF 338
Query: 223 RLQDGQCYLH-TGDFRASRLMQSYPLLVNH--RVNVLYLDTTYCNPKYKFPSKEDVLNYV 279
+ +G + +GDF+ + P VN R+ + ++ TY PS+ + +
Sbjct: 339 HIGEGLYNVAFSGDFKYEKTRLFDP-AVNQFPRIETMVMEATYGGMHDIQPSRREAEMEI 397
Query: 280 VRLTKNCLKKQPKTLVVVGAYSIGK-ESVFLAISKAL 315
+ K L++ K V++ +++G+ + V + + +A+
Sbjct: 398 QNIIKKTLQRGGK--VLIPTFAVGRSQEVMIVLEEAI 432
>gi|300706475|ref|XP_002995499.1| hypothetical protein NCER_101581 [Nosema ceranae BRL01]
gi|239604633|gb|EEQ81828.1| hypothetical protein NCER_101581 [Nosema ceranae BRL01]
Length = 671
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 30/136 (22%)
Query: 126 IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGL----GKRWSHGPIYCSPLTARLVRM 181
I PF +D ++ C F+THFH DH GL K G ++ + T ++R
Sbjct: 69 IASLPF-LDTVDLSTVDAC---FITHFHLDHAAGLPYLTEKTNFKGKVFMTHPTKAILRW 124
Query: 182 CL-----LVNPSY----------------IHPLELNTEHVIDGVKVTLLEANHCPGAALI 220
L ++N S I P++ + E I+G+KV L A H GAA+
Sbjct: 125 MLNDYVRIINASSDVDFYTEKDLNNCYNKIIPIDYHQEINIEGIKVIGLNAGHVLGAAMF 184
Query: 221 HFRLQDGQCYLHTGDF 236
+++D L+TGD+
Sbjct: 185 LIKIEDS-VMLYTGDY 199
>gi|448301503|ref|ZP_21491496.1| beta-lactamase [Natronorubrum tibetense GA33]
gi|445584239|gb|ELY38563.1| beta-lactamase [Natronorubrum tibetense GA33]
Length = 537
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSH-GPIYCSPLTARLVRMCLL----------VNP--SYIH 191
+A LTH H DHY LG H PIY SP TA ++ L VN +
Sbjct: 51 NAILLTHAHIDHYRSLGANLRHNAPIYVSPATAAVLEQSLPEARKDNDLGDVNAVLEALE 110
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAA--LIHFR 223
P+E T ++D + V + A H PGAA LI FR
Sbjct: 111 PIEEWTA-ILDDLAVRPVPAGHAPGAAGFLIRFR 143
>gi|347522769|ref|YP_004780339.1| KH-domain/beta-lactamase-domain containing protein [Pyrolobus
fumarii 1A]
gi|343459651|gb|AEM38087.1| KH-domain/beta-lactamase-domain protein [Pyrolobus fumarii 1A]
Length = 649
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 42/202 (20%)
Query: 144 CSAYFLTHFHYDHYG---GLGKRWSHGPIYCSPLTARLVRMCLL---------------- 184
A +TH H DH G L K GP+Y + T L+ + L
Sbjct: 236 LDAVIITHAHLDHMGLVPFLFKYGFKGPVYVTKPTRDLMVLSLFDFLDVVTKEGRKPPFS 295
Query: 185 ---VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGDFR 237
+ +H + L+ E V D +K+T A H G+A+ H + +G ++TGD +
Sbjct: 296 QHDIRKMILHTIALDYEEVTDVTPDIKLTFYNAGHILGSAIAHLHIGEGLHNIVYTGDMK 355
Query: 238 --ASRLM----QSYPLLVNHRVNVLYLDTTYCNPKYKFPSK--EDVLNYVVRLTKNCLKK 289
+RL+ +P RV L +++TY N + + S+ +++ ++VR + K
Sbjct: 356 YANTRLLTKAHTKFP-----RVETLIIESTYGNKRQQKRSQAEAELIQWIVRTIE---AK 407
Query: 290 QPKTLVVVGAYSIGKESVFLAI 311
+ K L+ V A +E + + +
Sbjct: 408 KGKVLIPVLAVGRAQEIILVIV 429
>gi|384919759|ref|ZP_10019796.1| hypothetical protein C357_11614 [Citreicella sp. 357]
gi|384466361|gb|EIE50869.1| hypothetical protein C357_11614 [Citreicella sp. 357]
Length = 336
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 20/187 (10%)
Query: 127 PGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVN 186
P F +D +R + +TH H DH RW H + A ++R L
Sbjct: 16 PAGDFHIDPWRP-----VARALITHGHADH-----SRWGHDSYLSTDAAAPVIRHRL--G 63
Query: 187 PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS--RLMQS 244
I L + I G V+ A H PG+A I + G+ ++ +GD++ S L ++
Sbjct: 64 DISIDTLRYGEQRRIGGATVSFHPAGHIPGSAQIRVEVA-GEVWVASGDYKVSPDGLCEA 122
Query: 245 YPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGK 304
+ + H + T+ P +K+ + V + C + L +GAYS+GK
Sbjct: 123 FEPVKCH---AFITECTFGLPVFKWAPQATVAADINAWWSACAAEGRPCL--LGAYSLGK 177
Query: 305 ESVFLAI 311
LA+
Sbjct: 178 AQRVLAL 184
>gi|424034340|ref|ZP_17773745.1| RNA-metabolising metallo-beta-lactamase family protein [Vibrio
cholerae HENC-01]
gi|408872943|gb|EKM12150.1| RNA-metabolising metallo-beta-lactamase family protein [Vibrio
cholerae HENC-01]
Length = 445
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 141 IKGCSAYFLTHFHYDHYGGLGKRWS---HGPIYCSPLTARLVRMCLLVNPSYIHPLELN- 196
+K A LTH H DH G L + GPIYC+ TA LV L++ L LN
Sbjct: 61 VKHVKALVLTHAHIDHIGRLPWLLAAGFKGPIYCTKATAELV--PLMLEDGLKLQLGLNF 118
Query: 197 --TEHVIDGVKVTLL-------------------EANHCPGAALIHFRLQDGQCYLHTGD 235
+ V++ +K L A H G+A + F+L + + + +GD
Sbjct: 119 HQRQQVLNVIKKQLRLHDYQQWLPLGKQCYLRFQPAGHILGSAYVEFKLPNHEIIVFSGD 178
Query: 236 FRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYK-FPSKEDVLNYVVRLTKNCLKKQPKTL 294
S R + L++++TY N +++ ++ + LN ++ + L Q +
Sbjct: 179 LGPSNTPLLPDPKPPKRADYLFIESTYGNKEHEDIATRTERLNAII---DHAL--QDGGV 233
Query: 295 VVVGAYSIGKESVFL 309
+++ A+S+G+ L
Sbjct: 234 ILIPAFSVGRTQELL 248
>gi|376004796|ref|ZP_09782421.1| putative Metal-dependent hydrolase, beta-lactamase superfamily I
[Arthrospira sp. PCC 8005]
gi|375326814|emb|CCE18174.1| putative Metal-dependent hydrolase, beta-lactamase superfamily I
[Arthrospira sp. PCC 8005]
Length = 536
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 140 SIKGCSAYFL--THFHYDHYGGL---GKRWSHGPIYCSPLTARLV------RMCLLVNPS 188
S +GC A + +H H DH GL + PIY S +T++L+ + P
Sbjct: 44 SSQGCIADLVICSHAHADHVRGLLALHESCPELPIYASDVTSQLLPINWPEELSSGQMPK 103
Query: 189 YIHPLELNTE-HVIDGVKVTLLEANHCPGAALIHFRLQ-DGQCY--LHTGDF--RASRLM 242
+ L L TE + +G+ +TL A H PGA + + + Y +TGDF SRL+
Sbjct: 104 FCQSLPLRTEVRLKEGLSITLFPAGHLPGATCMLLKYNAPNRTYKLFYTGDFFLSNSRLV 163
Query: 243 QSYPL--LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAY 300
+ PL L + +VL L+ +Y +Y P + + N + + L+ A
Sbjct: 164 EGLPLGELRGLKPDVLILEGSYGTARY--PHRRQLENQLAERIYRAIASGYSVLIPTPAL 221
Query: 301 SIGKESVFL 309
+G+E + L
Sbjct: 222 GLGQELLML 230
>gi|336252222|ref|YP_004595329.1| KH-domain/beta-lactamase-domain-containing protein [Halopiger
xanaduensis SH-6]
gi|335336211|gb|AEH35450.1| KH-domain/beta-lactamase-domain protein [Halopiger xanaduensis
SH-6]
Length = 644
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 37/213 (17%)
Query: 134 DAFRYGSIKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------ 184
+AF G + A LTH H DH L K GPIYC+ T L+ + L
Sbjct: 228 EAFGAGP-ETIDAVVLTHAHLDHSAFIPLLFKYGYDGPIYCTEPTRDLMGLLTLDYLDVA 286
Query: 185 -------------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG- 227
V + H + L V D VK+TL A H G+A+ HF + DG
Sbjct: 287 AKEGRTPPYDSEQVREAIKHTIPLEYGDVTDIAPDVKLTLHNAGHILGSAVSHFHIGDGL 346
Query: 228 --QCYLHTGDFRASRLMQSYPLLVNH--RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
C+ + +RL VN RV L L++TY +ED + R+
Sbjct: 347 YNVCFSGDIHYEDTRLFNG---AVNDFPRVETLVLESTYGGRNDYQTDQEDSEEKLKRVI 403
Query: 284 KNCLKKQPKTLVVVGAYSIGK-ESVFLAISKAL 315
+ K V++ A+++G+ + + L + +A+
Sbjct: 404 NEAYDRGGK--VLIPAFAVGRSQEIMLVLEEAM 434
>gi|332796300|ref|YP_004457800.1| exonuclease [Acidianus hospitalis W1]
gi|332694035|gb|AEE93502.1| exonuclease, beta-lactamase fold, RNA processing [Acidianus
hospitalis W1]
Length = 329
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH--GPIYCSPLTARLVRMCLLV 185
G FTVD + + +THFH DH L K S G I P L + +
Sbjct: 14 GNNFTVDGHYERNFR-----VVTHFHADHILQLNKSISTCIGIISTPPTLEVLSVLGYEI 68
Query: 186 NPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSY 245
+ + I+ K+ L++A+H GAA + +G+ +TGDF+ +
Sbjct: 69 PKKKAMGISYGVKIAIEDEKIELVQADHVFGAAQVVVTNSNGESVGYTGDFKNPG--KGT 126
Query: 246 PLLVNHRVNVLYLDTTYCNPKYKFPSKEDV 275
P+L +VL +DTTY P ++ +++V
Sbjct: 127 PIL---NTDVLIVDTTYGKPGFRRKFRDEV 153
>gi|297527491|ref|YP_003669515.1| KH-domain/beta-lactamase-domain-containing protein [Staphylothermus
hellenicus DSM 12710]
gi|297256407|gb|ADI32616.1| KH-domain/beta-lactamase-domain protein [Staphylothermus hellenicus
DSM 12710]
Length = 647
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 46/207 (22%)
Query: 144 CSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLLVN-------------- 186
A +TH H DH G L K GP+Y + T L M +++
Sbjct: 238 LDAVIVTHAHLDHIGLVPLLYKYGYRGPLYVTKPTREL--MVIMIKDLIEVTQREGKYLP 295
Query: 187 -------PSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG-QCYLHTGD 235
+ +H + L V D +KVT+ A H G+A++H + G ++TGD
Sbjct: 296 YSEKDLMTAILHTIPLEYGDVTDVAPDIKVTMYNAGHILGSAIVHLHIGMGLHNIVYTGD 355
Query: 236 FR--ASRLMQ----SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK 289
F+ +RL+ +P RV L +++TY + + S+ + ++++ K +++
Sbjct: 356 FKYAPTRLLNRAEDKFP-----RVETLIMESTYGATRQQ--SRREAEAELIKIVKKTIER 408
Query: 290 QPKTLVVVGAYSIGK-ESVFLAISKAL 315
K +V++ +++G+ + + L ++ A+
Sbjct: 409 --KGIVLIPVFAVGRGQEIMLVLNDAI 433
>gi|57641363|ref|YP_183841.1| cleavage and polyadenylation specficity factor subunit-like protein
[Thermococcus kodakarensis KOD1]
gi|57159687|dbj|BAD85617.1| cleavage and polyadenylation specficity factor subunit homolog
[Thermococcus kodakarensis KOD1]
Length = 648
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 53/221 (23%)
Query: 131 FTVDAFRYGSIKGC-SAYFLTHFHYDHYGGLGKRWSH----GPIYCSPLTARLVRMCLL- 184
F FRY +G A +TH H DH G L + + GPIY +P T L M LL
Sbjct: 232 FDAPEFRYVLDEGLLDAIIITHAHLDHSGMLPYLFRYKLFDGPIYTTPPTRDL--MTLLQ 289
Query: 185 -----------VNPSY---------IHPLELNTEHVID---GVKVTLLEANHCPGAALIH 221
V P Y H + L+ V D +++TL A H G++++H
Sbjct: 290 QDFIEIQHMNGVEPLYRPKDIKEVIKHTITLDYGEVRDIAPDIRLTLHNAGHILGSSIVH 349
Query: 222 FRLQDGQCYLH----TGDFR--ASRLMQ----SYPLLVNHRVNVLYLDTTYCNPK-YKFP 270
+ +G LH TGDF+ +RL + +P R+ L +++TY Y+ P
Sbjct: 350 LHIGNG---LHNIAITGDFKFIPTRLFEPAVSRFP-----RLETLVMESTYGGSNDYQMP 401
Query: 271 SKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAI 311
+E+ ++ + LK+ K V++ A ++G+ + +
Sbjct: 402 -REEAEKRLIEVIHQTLKRGGK--VLIPAMAVGRAQEIMMV 439
>gi|319785884|ref|YP_004145359.1| mRNA 3'-end processing factor [Pseudoxanthomonas suwonensis 11-1]
gi|317464396|gb|ADV26128.1| mRNA 3'-end processing factor [Pseudoxanthomonas suwonensis 11-1]
Length = 348
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 26/191 (13%)
Query: 148 FLTHFHYDHY-GGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKV 206
+TH H DH GG+G+ +C+ + ++R L +H I +V
Sbjct: 35 VITHGHGDHARGGMGE------YHCTRESLPILRWRL--GEQVVHAHGYGEAFSIGRARV 86
Query: 207 TLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPK 266
+L A H G+A + DGQ ++ +GD++ P R + + T+ P
Sbjct: 87 SLHPAGHVLGSAQVRIE-ADGQVWVASGDYKRQPDPTCAPFEPV-RCDTFITEATFGLPV 144
Query: 267 YKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKAL----------- 315
Y++P V +VR + C ++ + ++ Y++GK LA + L
Sbjct: 145 YRWPDTRQVAADIVRWRRQCAER--GEVAILYCYALGKAQRVLAELRGLDDMPALLHGAI 202
Query: 316 --GVKIYANAS 324
GV++Y A
Sbjct: 203 DAGVQVYRQAG 213
>gi|222529916|ref|YP_002573798.1| beta-lactamase domain-containing protein [Caldicellulosiruptor
bescii DSM 6725]
gi|222456763|gb|ACM61025.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM
6725]
Length = 821
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 48/228 (21%)
Query: 143 GCSAYFLTHFHYDHYGGL---GKRWSHGPIYCSPLTARLVRMCLLVNPSYIH------PL 193
G ++H H DH G L + + H Y + T L+++ L + + P+
Sbjct: 50 GVDVCLISHAHLDHIGSLPLIAREYPHIFFYANQPTKDLIKVLLYDSLRIMEIAEDEIPI 109
Query: 194 --ELNTEHVID---------------GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDF 236
E N E ++D G+KVT A H GA++I + Q+G L+TGDF
Sbjct: 110 YAEKNVEDLLDRTLTYGFNYTFEPIEGIKVTFFPAGHILGASMIFIQTQEGSI-LYTGDF 168
Query: 237 RASRLM----QSYPLLVNHRVNVLYLDTTYCNPKY--KFPSKEDVLNYVVRLTKNCLKKQ 290
A R + S P + R +V+ ++TY + + + +E + N V + K
Sbjct: 169 SADRQLTVDKASVPKI---RPDVVICESTYGDRLHTNRNFEEERLFNTVAEVISQGGK-- 223
Query: 291 PKTLVVVGAYSIGKESVFLAI------SKALGVKIYANASRRRVLQSF 332
V++ A++IG+ + I + + ++ + R V++ +
Sbjct: 224 ----VLIPAFAIGRAQEIILILRNYMKKRKVSFNVFIDGMVREVIRVY 267
>gi|254469697|ref|ZP_05083102.1| metallo-beta-lactamase family protein [Pseudovibrio sp. JE062]
gi|211961532|gb|EEA96727.1| metallo-beta-lactamase family protein [Pseudovibrio sp. JE062]
Length = 555
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 29/195 (14%)
Query: 115 IVDRSCPFYK-KIPGTPFTVDAFRY-----GSIKGCSAYFLTHFHYDHYGGLGKRWSH-- 166
IVD F ++PG + R+ I G +TH H DHYG L W
Sbjct: 37 IVDFGVSFAGPEMPGVDLVLPDIRFLEEERSRIDGI---VITHAHEDHYGALSYLWKRLE 93
Query: 167 GPIYCSPLTARLVRMCLLVNPS-YIHPLELNTE------HVIDGVKVTLLEANHCPGAAL 219
P+Y +P TARL+ L+ + + Y P+ + + + D VT+ + P A
Sbjct: 94 LPVYATPFTARLLEAKLIGDGADYQIPVTVVNQGDRFKAGIFDIELVTMTHSIPEPCALA 153
Query: 220 IHFRLQDGQCYLHTGDFRASRL--------MQSYPLLVNHRVNVLYLDTTYCNPKYKFPS 271
I GQ LH+GD++ +Q L + V+V D+T PS
Sbjct: 154 IRI---GGQLVLHSGDWKIDLTPGVGKAIDLQRLRELGDEGVDVFVCDSTNAVRDGVSPS 210
Query: 272 KEDVLNYVVRLTKNC 286
+ DV + R+ K
Sbjct: 211 EADVKEELTRIIKEA 225
>gi|327399985|ref|YP_004340824.1| beta-lactamase domain-containing protein [Archaeoglobus veneficus
SNP6]
gi|327315493|gb|AEA46109.1| beta-lactamase domain protein [Archaeoglobus veneficus SNP6]
Length = 407
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 27/209 (12%)
Query: 141 IKGCSA--YFLTHFHYDHYGGLGKRWSHGP-IYCSPLTARLVR------MCLLVNPSY-- 189
I G S +TH H DH G + + P +Y +P T L M ++ P Y
Sbjct: 39 INGVSPTEVIITHGHLDHVGVVPNLMDYDPSVYMTPPTRDLAHVLLKDSMNIMEYPPYGR 98
Query: 190 --IHPLELNTEHV-------IDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240
E N V I G +VTL A H PG+A++H + L+TGD +
Sbjct: 99 REFRQFESNARDVEFYEPFYISGWEVTLFNAGHIPGSAMVH--MSKDINILYTGDVKLQE 156
Query: 241 LMQSYPLLVNH-RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGA 299
P +N +VL +++TY ++ P + ++ V L + ++ A
Sbjct: 157 TRLLEPADLNFPETDVLIVESTYFGIEH--PDRRELEKAFVESVIETLDRGGHA--IIPA 212
Query: 300 YSIGKESVFLAISKALGVKIYANASRRRV 328
+++G+ L I + G+ Y + + V
Sbjct: 213 FAVGRTQEVLMILEKHGITPYVDGMGKEV 241
>gi|433593106|ref|YP_007282592.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Natrinema pellirubrum DSM 15624]
gi|448335866|ref|ZP_21524997.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Natrinema pellirubrum DSM 15624]
gi|433308144|gb|AGB33954.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Natrinema pellirubrum DSM 15624]
gi|445615492|gb|ELY69139.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Natrinema pellirubrum DSM 15624]
Length = 570
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 27/136 (19%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID- 202
+A LTH H DHY LG +HG P+Y + TA ++ + H NT+ V+D
Sbjct: 55 AAICLTHAHLDHYQSLGDALAHGAPVYAATDTATMLEDVFAAGAA--HYDLTNTDRVLDQ 112
Query: 203 ------------GVKVTLLEANHCPGAALIHFRL---QDGQCYLHTGDFRASRLMQSYP- 246
G++V + A H PGAA F + + + L TGDF +R YP
Sbjct: 113 LEPIAEWTRIVSGLRVHPVPAGHTPGAAGFLFEVTADDERRTILVTGDF-TTRRAAGYPG 171
Query: 247 ----LLVNHRVNVLYL 258
L VN V+VL L
Sbjct: 172 FDRDLPVN--VDVLVL 185
>gi|374327735|ref|YP_005085935.1| mRNA 3'-end processing factor [Pyrobaculum sp. 1860]
gi|356643004|gb|AET33683.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum sp. 1860]
Length = 644
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 141 IKGCSAYFLTHFHYDHYGGLG---KRWSHGPIYCSPLTARLVRMCLL----------VNP 187
I A LTH H DH G L K GP+Y + T + L + P
Sbjct: 232 IDKLDAVVLTHAHMDHVGCLPLLFKYGYRGPVYMTDPTKYQAFILLSDYVELKEREGLQP 291
Query: 188 SY---------IHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQ-CYLHTG 234
S+ H + L+ E V D +K+T +A H G+A+ H + +G+ L+TG
Sbjct: 292 SFSMADIEAVIYHTITLDYEEVTDIAPDIKLTFYDAGHEIGSAMAHLHIGNGRYNILYTG 351
Query: 235 DFR--ASRLMQSYPLLVN--HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
DF+ +RL+ VN RV +L +++TY P + + N + + + + K
Sbjct: 352 DFKYGKTRLLNR---AVNKFKRVEMLIMESTYGGKDDVQPPRLEAENALAKHVSDTVSKG 408
Query: 291 PKTLVVVGAYSIGKESVFL 309
K L+ + G+E +++
Sbjct: 409 GKVLIPAFSTGRGQEILYI 427
>gi|374331766|ref|YP_005081950.1| metallo-beta-lactamase family protein [Pseudovibrio sp. FO-BEG1]
gi|359344554|gb|AEV37928.1| metallo-beta-lactamase family protein [Pseudovibrio sp. FO-BEG1]
Length = 555
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 29/195 (14%)
Query: 115 IVDRSCPFYK-KIPGTPFTVDAFRY-----GSIKGCSAYFLTHFHYDHYGGLGKRWSH-- 166
IVD F ++PG + R+ I G +TH H DHYG L W
Sbjct: 37 IVDFGVSFAGPEMPGVDLVLPDIRFLEEERSRIDGI---VITHAHEDHYGALSYLWKRLE 93
Query: 167 GPIYCSPLTARLVRMCLLVNPS-YIHPLELNTE------HVIDGVKVTLLEANHCPGAAL 219
P+Y +P TARL+ L+ + + Y P+ + + + D VT+ + P A
Sbjct: 94 LPVYATPFTARLLEAKLIGDGADYQIPVTVVNQGDRFKAGIFDIELVTMTHSIPEPCALA 153
Query: 220 IHFRLQDGQCYLHTGDFRASRL--------MQSYPLLVNHRVNVLYLDTTYCNPKYKFPS 271
I GQ LH+GD++ +Q L + V+V D+T PS
Sbjct: 154 IRI---GGQLVLHSGDWKIDLTPGVGKAIDLQRLRELGDEGVDVFVCDSTNAVRDGVSPS 210
Query: 272 KEDVLNYVVRLTKNC 286
+ DV + R+ K
Sbjct: 211 EADVKEELTRIIKEA 225
>gi|422933414|ref|ZP_16966334.1| hydrolase [Fusobacterium nucleatum subsp. animalis ATCC 51191]
gi|339891668|gb|EGQ80621.1| hydrolase [Fusobacterium nucleatum subsp. animalis ATCC 51191]
Length = 378
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 144 CSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI----HPLELNTEH 199
C TH+H DH G + K + I+ LT +++ M + N S I E
Sbjct: 61 CDGVLFTHYHRDHIGLIRKINKNISIFMGSLTKKILLMQKIENTSRISKNVKTFEQGKSF 120
Query: 200 VIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR 237
I+ +K+T +H + + +G+ LHTGDFR
Sbjct: 121 YIEDIKITPFMVDHSAFDSYMFLIEAEGKKILHTGDFR 158
>gi|440798160|gb|ELR19228.1| DNA repair metallobeta-lactamase protein [Acanthamoeba castellanii
str. Neff]
Length = 572
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 9/55 (16%)
Query: 373 QYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQ 427
+Y+ ++A RPTGW G+ ++ ++ N+ +Y VPYSEHS++ ELREFV+
Sbjct: 11 RYSRIIAIRPTGW-----AGD----VKHTTKRNLELYEVPYSEHSNYYELREFVE 56
>gi|332825593|ref|XP_001138234.2| PREDICTED: protein artemis-like [Pan troglodytes]
Length = 289
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 17/129 (13%)
Query: 231 LHTGDFR-----ASRLMQSYPLLVNHRVNVLYLDTTYCNPK-YKFPSKEDVLNYVVRLTK 284
L+TGDFR A+R+ Y + +YLDT C+P+ Y+ PS+E+ L+ V+ L +
Sbjct: 158 LYTGDFRLVQGEAARMELLYSRGRVKDIQSVYLDTMLCDPRFYQIPSREECLSGVLELVQ 217
Query: 285 NCLKKQPKTLVVV---GAYSIGKESVFLAISKALGVKIYANASRRRVLQSF-DWPELSGN 340
+ + + +V + AY G +F +S+ LGV+I+ N L F + PE+ +
Sbjct: 218 SWITRSLYRVVWLNCKAAYGYG--YLFTNLSEELGVQIHVNK-----LDMFRNMPEILHH 270
Query: 341 LCTQGNDTL 349
L T N +
Sbjct: 271 LTTDHNTQI 279
>gi|83953632|ref|ZP_00962353.1| metallo-beta-lactamase family protein [Sulfitobacter sp. NAS-14.1]
gi|83841577|gb|EAP80746.1| metallo-beta-lactamase family protein [Sulfitobacter sp. NAS-14.1]
Length = 338
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 141 IKGCSAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLLVNPSYIHPLELNTEH 199
+KG A F+TH H DH GG G PIY + TA+ + VN L
Sbjct: 29 LKGADAVFITHDHIDHIGGAIYAVEAGLPIYATAQTAKALPPAAKVN-----LLPEQGVS 83
Query: 200 VIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLD 259
VIDGV++T H G +HF L +G Y +GD+ S +PL + LD
Sbjct: 84 VIDGVQLTTGRNGHAMGGVWMHFALGEGLFY--SGDW--SEESDWFPLDLPPPAATAILD 139
Query: 260 TTY 262
+Y
Sbjct: 140 CSY 142
>gi|428318418|ref|YP_007116300.1| beta-lactamase domain protein [Oscillatoria nigro-viridis PCC 7112]
gi|428242098|gb|AFZ07884.1| beta-lactamase domain protein [Oscillatoria nigro-viridis PCC 7112]
Length = 563
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 150 THFHYDHYGGL---GKRWSHGPIYCSPLTARLVRMCLLVNPS-----------YIHPLEL 195
TH H DH GL + + H PIY S +TARL+ + P + PLE
Sbjct: 75 THAHSDHARGLLALHQSFPHLPIYASEVTARLLPLNWPELPQQPESRFCQGLPWQSPLE- 133
Query: 196 NTEHVIDGVKVTLLEANHCPGAA---LIHFRLQDGQCYLHTGDF--RASRLMQSYPL--L 248
V G+ V L + H PGAA L + ++TGDF SRL++ PL L
Sbjct: 134 ----VRPGLSVQLFPSGHLPGAATVLLTYAAPHRTYTVVYTGDFFLSNSRLVEGLPLGEL 189
Query: 249 VNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVF 308
+ +VL L+ +Y ++ P + + N + + L+ A +G+E +
Sbjct: 190 RGMKPDVLILEGSYGTARH--PHRRQLENQLADRIHRAIADGYSVLLPAPALGLGQEMLM 247
Query: 309 L 309
L
Sbjct: 248 L 248
>gi|145590331|ref|YP_001152333.1| beta-lactamase domain-containing protein [Pyrobaculum arsenaticum
DSM 13514]
gi|145282099|gb|ABP49681.1| beta-lactamase domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 635
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 141 IKGCSAYFLTHFHYDHYGGLG---KRWSHGPIYCSPLTARLVRMCLL----------VNP 187
I A LTH H DH G L K GP+Y + T + L + P
Sbjct: 223 IDRLDAVVLTHAHMDHVGCLPFLFKYGYKGPVYMTDPTKYQAFILLTDYVELKEREGLQP 282
Query: 188 SY---------IHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDGQ-CYLHTG 234
S+ H + L+ E V D +K+T +A H G+A+ H + +G+ L+TG
Sbjct: 283 SFSKADVEAVIYHTITLDYEEVTDIAPDIKLTFYDAGHEIGSAMAHLHIGNGRYNILYTG 342
Query: 235 DFR--ASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPK 292
DF+ +RL+ + RV +L +++TY P + + N + + + K K
Sbjct: 343 DFKYGKTRLLNR-AVSKFKRVEMLIMESTYGGKDDVQPPRHEAENALAKHISETVSKGGK 401
Query: 293 TLVVVGAYSIGKESVFLAI 311
L + A+S G+ L I
Sbjct: 402 VL--IPAFSTGRGQEILYI 418
>gi|118431090|ref|NP_147298.2| exonuclease [Aeropyrum pernix K1]
gi|116062416|dbj|BAA79487.2| putative exonuclease [Aeropyrum pernix K1]
Length = 671
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 40/207 (19%)
Query: 144 CSAYFLTHFHYDHYGGLG---KRWSHGPIYCSPLTARLVRMCL--LVN--------PSY- 189
A ++H H DH G L K GP+Y +P T ++ + L L+N P +
Sbjct: 246 LDAVVISHAHLDHVGTLPLLFKYGFRGPVYATPPTRDIMIIVLRDLINLMRKAQGEPPFE 305
Query: 190 ----------IHPLELNT-EHVIDGVKVTLLEANHCPGAALIHFRLQDGQ-CYLHTGDFR 237
+ P+ NT V +K+T + A H G++++H + G L+T DF+
Sbjct: 306 PRDVEKALTRLIPVNYNTVTDVAPDIKMTFINAGHILGSSMVHLHIGQGLYNILYTADFK 365
Query: 238 ASRLM--QSYPLLVN-----HRVNVLYLDTTYCNPKY--KFPSKEDVLNYVVRLTKNCLK 288
R+ +S LL RV L ++ TY + + + ++E+++N L K
Sbjct: 366 FYRIKNDRSTRLLPPAEYSFQRVEALIMEATYGSKETQPRAEAEEELIN----LVNKVYK 421
Query: 289 KQPKTLVVVGAYSIGKESVFLAISKAL 315
+ K L+ V A G+E + + +++AL
Sbjct: 422 RGGKLLIPVMAVGRGQE-ILVVLNEAL 447
>gi|427709948|ref|YP_007052325.1| beta-lactamase domain-containing protein [Nostoc sp. PCC 7107]
gi|427362453|gb|AFY45175.1| beta-lactamase domain-containing protein [Nostoc sp. PCC 7107]
Length = 556
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 18/195 (9%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMC----- 182
T A R S ++H H DH G L K + PIY S +T +L+ +
Sbjct: 61 LTKSAKRGSSPLPADVVLISHAHPDHARGVLALHKAFPLLPIYASEVTTKLLPLNWPEQN 120
Query: 183 LLVNPSYIHPLELNTE-HVIDGVKVTLLEANHCPGAALIHFRLQDGQ---CYLHTGDF-- 236
L P H L L + + +G+ V L A H PGA I Q L+TGDF
Sbjct: 121 LTEIPQLCHALPLRSPIELQEGLVVELFPAGHLPGAVAILLTYTTEQRTYKVLYTGDFFL 180
Query: 237 RASRLMQSYPL--LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTL 294
SRL++ L L VNVL ++ TY ++ P + + N + + + +
Sbjct: 181 SNSRLVEGLRLEELRGLDVNVLIIEGTYGTSRH--PHRRNQENQLAERINRAIAEYHSVI 238
Query: 295 VVVGAYSIGKESVFL 309
+ A +G+E + L
Sbjct: 239 LPTPALGLGQELLML 253
>gi|379003367|ref|YP_005259039.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Pyrobaculum oguniense TE7]
gi|375158820|gb|AFA38432.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Pyrobaculum oguniense TE7]
Length = 425
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 88/220 (40%), Gaps = 41/220 (18%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLV-------------------- 179
K SA FL+H H DH G L + + P+Y +PLT L
Sbjct: 49 KDLSAVFLSHAHLDHSGALPFLYISTRTPLYSTPLTMELSDLMYTDAIKLSGYYLPYTLE 108
Query: 180 ----RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
M + +Y P+++ +G+ +T A H PG+AL ++ G+ + TGD
Sbjct: 109 EVKETMSSAIPLTYGEPVDVG-----NGISLTAYNAGHIPGSALAVIEVE-GRVVVFTGD 162
Query: 236 FRAS-----RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
F R Y L N +V+ ++ TY + + P ++ + V+ K L+
Sbjct: 163 FNTVDTNLLRGADVYNLPKNP--DVVIMEATYASANH--PPRDKLEKEFVQSVKEVLEGG 218
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
L+ A +E + + + IY + R++ Q
Sbjct: 219 GSVLIPSFALGRAQEILLTLVKHGVEYPIYVDGLARQINQ 258
>gi|145591929|ref|YP_001153931.1| beta-lactamase domain-containing protein [Pyrobaculum arsenaticum
DSM 13514]
gi|145283697|gb|ABP51279.1| beta-lactamase domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 425
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 88/220 (40%), Gaps = 41/220 (18%)
Query: 142 KGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLV-------------------- 179
K SA FL+H H DH G L + + P+Y +PLT L
Sbjct: 49 KDLSAVFLSHAHLDHSGALPFLYISTRTPLYSTPLTMELSDLMYTDAIKLSGYYLPYTLE 108
Query: 180 ----RMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235
M + +Y P+++ +G+ +T A H PG+AL ++ G+ + TGD
Sbjct: 109 EVKETMSSAIPLTYGEPVDVG-----NGISLTAYNAGHIPGSALAVIEVE-GRVVVFTGD 162
Query: 236 FRAS-----RLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQ 290
F R Y L N +V+ ++ TY + + P ++ + V+ K L+
Sbjct: 163 FNTVDTNLLRGADVYNLPKNP--DVVIMEATYASANH--PPRDKLEKEFVQSVKEVLEGG 218
Query: 291 PKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQ 330
L+ A +E + + + IY + R++ Q
Sbjct: 219 GSVLIPSFALGRAQEILLTLVKHGVEYPIYVDGLARQINQ 258
>gi|295673106|ref|XP_002797099.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282471|gb|EEH38037.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 16/98 (16%)
Query: 192 PLELNTEHVI---DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL----MQS 244
PL++ TE + + V+VTL +ANHCPGA + +G+ L+TGD RA +
Sbjct: 63 PLQVPTEIELSPRNHVRVTLFDANHCPGAVMFLIE-GNGKTILYTGDIRAESWWVGNLIR 121
Query: 245 YPLLV-----NHRVNVLYLDTTYCNPK---YKFPSKED 274
P+L+ + R + +YLDTT+ FPSK +
Sbjct: 122 NPVLIPYTLGDKRFDKIYLDTTFATKSDVYQSFPSKAE 159
>gi|343485326|dbj|BAJ50980.1| conserved hypothetical protein [Candidatus Caldiarchaeum
subterraneum]
Length = 318
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 32/208 (15%)
Query: 140 SIKGCSAYF----------LTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSY 189
S+KG SA F ++H H DH G+ I + T L+R ++ Y
Sbjct: 14 SVKGFSAAFDTRPQKGLGFVSHAHSDHVAA-GRN-----ILATRETISLIRRVWQLSGGY 67
Query: 190 IHPLELNTE-HVIDGVKVTLLEANHCPGAALIHFRLQ-DGQCYLHTGDFRASRLMQSYPL 247
P+ + + D V V L + H G+A+ FRL G+ ++TGD + + + P
Sbjct: 68 -KPIPYRQDIGLSDSVSVRALNSGHVLGSAM--FRLDIGGESLVYTGDINTVQTLTTNPA 124
Query: 248 LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKE-- 305
+V ++TTY +P Y FP + + ++++ + + L +YSIGK
Sbjct: 125 EPVD-ADVFIIETTYGHPDYVFPPRHETEAWILKWVSKTIAE--GALPAFKSYSIGKSQE 181
Query: 306 -----SVFLAISKALGVKIYANASRRRV 328
+ + ++ +G K ANAS+ V
Sbjct: 182 LIKLFNTYTSLPVVVG-KTVANASKTYV 208
>gi|334119066|ref|ZP_08493153.1| beta-lactamase domain protein [Microcoleus vaginatus FGP-2]
gi|333458537|gb|EGK87154.1| beta-lactamase domain protein [Microcoleus vaginatus FGP-2]
Length = 545
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 32/183 (17%)
Query: 150 THFHYDHYGGL---GKRWSHGPIYCSPLTARLV-------------RMCLLVNPSYIHPL 193
TH H DH GL + + H PIY S +TARL+ R C + + PL
Sbjct: 56 THAHSDHARGLLALHQSFPHLPIYASEVTARLLPLNWPELAQQPESRFCQGL--PWQSPL 113
Query: 194 ELNTEHVIDGVKVTLLEANHCPGAA---LIHFRLQDGQCYLHTGDF--RASRLMQSYPL- 247
E V G+ V L + H PGAA L + ++TGDF SRL++ PL
Sbjct: 114 E-----VRPGLSVQLFPSGHLPGAATVLLTYAAPHRTYTVVYTGDFFLSNSRLVEGLPLG 168
Query: 248 -LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKES 306
L + +VL L+ +Y ++ P + + N + + L+ A +G+E
Sbjct: 169 ELRGMKPDVLILEGSYGTARH--PHRRQLENQLADRIHRAIADGYSVLLPAPALGLGQEM 226
Query: 307 VFL 309
+ L
Sbjct: 227 LML 229
>gi|440302602|gb|ELP94909.1| hypothetical protein EIN_249830, partial [Entamoeba invadens IP1]
Length = 73
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 131 FTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPI 169
F VD+F+Y + YFL+HFH DHYGG+ K W HG I
Sbjct: 32 FPVDSFKYRTTM-FEHYFLSHFHSDHYGGITKTWKHGII 69
>gi|70606580|ref|YP_255450.1| hypothetical protein Saci_0787 [Sulfolobus acidocaldarius DSM 639]
gi|449066801|ref|YP_007433883.1| hypothetical protein SacN8_03815 [Sulfolobus acidocaldarius N8]
gi|449069074|ref|YP_007436155.1| hypothetical protein SacRon12I_03800 [Sulfolobus acidocaldarius
Ron12/I]
gi|68567228|gb|AAY80157.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
gi|449035309|gb|AGE70735.1| hypothetical protein SacN8_03815 [Sulfolobus acidocaldarius N8]
gi|449037582|gb|AGE73007.1| hypothetical protein SacRon12I_03800 [Sulfolobus acidocaldarius
Ron12/I]
Length = 326
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 25/197 (12%)
Query: 128 GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSH-GPIYCSPLTARLVRMCLLVN 186
G FTVD + THFH DH L K I +P T + + +
Sbjct: 13 GKNFTVDGHYKRLFRAV-----THFHSDHLTELEKSLKECTSIIGTPATIEALDVLGYIV 67
Query: 187 PSYIH-PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFR----ASRL 241
P + PLE E + G ++ L +A H GAA + + + +TGDFR +++
Sbjct: 68 PKHKKFPLEYGIEIELSGERIKLEKAEHILGAAQVLIETDETEI-AYTGDFREPGKGTKI 126
Query: 242 MQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYS 301
+ ++L +D TY NP+ K+DV + L K+P + + G Y
Sbjct: 127 LNP---------DILIIDATYGNPRLVRQFKQDVDMLFADYVSDELLKRP--VKIYGYY- 174
Query: 302 IGKESVFLAISKALGVK 318
GK + I + GV+
Sbjct: 175 -GKIQEAMKILRKYGVE 190
>gi|308049063|ref|YP_003912629.1| beta-lactamase [Ferrimonas balearica DSM 9799]
gi|307631253|gb|ADN75555.1| beta-lactamase domain protein [Ferrimonas balearica DSM 9799]
Length = 468
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 56/215 (26%)
Query: 142 KGCSAYFLTHFHYDHYGGL---GKRWSHGPIYCSPLTARLVRMCL--------------- 183
+ A L+H H DH G L +R GPIYC+ T L+ + L
Sbjct: 53 RDIDAVVLSHAHLDHSGALPRLMRRGYRGPIYCTGATLNLLAVLLKDACNLYLKDLERDN 112
Query: 184 ---------LVNPSY-------------IHPLELNTEHVIDGVKVTLLEANHCPGAALIH 221
+ P Y + P +L T+ ++ GV+V LL+A H GAA++H
Sbjct: 113 LVRKRKGQKVQKPVYEMEDVLAVLEACQVLPYDLPTD-ILPGVRVNLLDAGHILGAAMVH 171
Query: 222 FRLQDG-----QCYLHTGDF--RASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKED 274
L DG L +GD S LM+ P V V+ + +++TY N ++ S ++
Sbjct: 172 LTLDDGSEPEPMRLLFSGDLGNTESPLMRD-PAPVP-EVDWVMMESTYGNRNHR--SYQE 227
Query: 275 VLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFL 309
L+ + + L+ +++V A+++G+ L
Sbjct: 228 TLDELAEV----LESARGGVILVPAFAVGRTQEVL 258
>gi|429192458|ref|YP_007178136.1| KH-domain/beta-lactamase-domain-containing protein
[Natronobacterium gregoryi SP2]
gi|448325869|ref|ZP_21515248.1| KH-domain/beta-lactamase-domain-containing protein
[Natronobacterium gregoryi SP2]
gi|429136676|gb|AFZ73687.1| KH-domain/beta-lactamase-domain protein [Natronobacterium gregoryi
SP2]
gi|445614014|gb|ELY67697.1| KH-domain/beta-lactamase-domain-containing protein
[Natronobacterium gregoryi SP2]
Length = 644
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 37/213 (17%)
Query: 134 DAFRYGSIKGCSAYFLTHFHYDHYGG---LGKRWSHGPIYCSPLTARLVRMCLL------ 184
+AF G + A LTH H DH L K GPIYC+ T L+ + L
Sbjct: 228 EAFGAGP-ETIDAVVLTHAHLDHSAFIPLLFKYGYDGPIYCTEPTRDLMGLLTLDYLDVA 286
Query: 185 -------------VNPSYIHPLELNTEHVID---GVKVTLLEANHCPGAALIHFRLQDG- 227
V + H + L V D VK+T A H G+A+ HF + DG
Sbjct: 287 AKEGRTPPYDSEQVREAIKHCIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDGL 346
Query: 228 --QCYLHTGDFRASRLMQSYPLLVNH--RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLT 283
C+ + +RL VN RV L L++TY +ED + R+
Sbjct: 347 YNVCFSGDIHYEDTRLFNG---AVNDFPRVETLVLESTYGGRNDYQTDQEDSEEKLKRVI 403
Query: 284 KNCLKKQPKTLVVVGAYSIGK-ESVFLAISKAL 315
++ K V++ A+++G+ + + L I +A+
Sbjct: 404 NEAYEQDGK--VLIPAFAVGRSQEIMLVIEEAM 434
>gi|83942412|ref|ZP_00954873.1| metallo-beta-lactamase family protein [Sulfitobacter sp. EE-36]
gi|83846505|gb|EAP84381.1| metallo-beta-lactamase family protein [Sulfitobacter sp. EE-36]
Length = 338
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 141 IKGCSAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCLLVNPSYIHPLELNTEH 199
+KG A F+TH H DH GG G PIY + TA+ + VN L
Sbjct: 29 LKGADAVFITHDHIDHIGGAIYAVEAGLPIYATAQTAKALPPAAKVN-----LLPERGVS 83
Query: 200 VIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLD 259
VIDGV++T H G +HF L +G Y +GD+ S +PL + LD
Sbjct: 84 VIDGVQLTTGRNGHAMGGVWMHFALGEGLFY--SGDW--SEESDWFPLDLPPPAATAILD 139
Query: 260 TTY 262
+Y
Sbjct: 140 CSY 142
>gi|433593180|ref|YP_007282666.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Natrinema pellirubrum DSM 15624]
gi|448335733|ref|ZP_21524868.1| metallo-beta-lactamase superfamily domain-containing protein
[Natrinema pellirubrum DSM 15624]
gi|433308218|gb|AGB34028.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Natrinema pellirubrum DSM 15624]
gi|445615943|gb|ELY69580.1| metallo-beta-lactamase superfamily domain-containing protein
[Natrinema pellirubrum DSM 15624]
Length = 759
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARL--------VRMCLLVNPSYI----H 191
+A LTH H DHY L + G PI+ SP TA + VR + +P I
Sbjct: 53 AAILLTHAHLDHYQSLDEAHRDGAPIFTSPGTAAILEDVLAEGVRHHSMSDPDSILERVE 112
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQ---CYLHTGDF 236
++ + V D + V + A H PGA R +DGQ L TGDF
Sbjct: 113 AIDDWADVVGDDISVAPVPAGHTPGACGFLIRARDGQESFRALATGDF 160
>gi|335438408|ref|ZP_08561154.1| metallo-beta-lactamase superfamily domain protein [Halorhabdus
tiamatea SARL4B]
gi|335441358|ref|ZP_08562068.1| metallo-beta-lactamase superfamily domain protein [Halorhabdus
tiamatea SARL4B]
gi|334887595|gb|EGM25921.1| metallo-beta-lactamase superfamily domain protein [Halorhabdus
tiamatea SARL4B]
gi|334892183|gb|EGM30422.1| metallo-beta-lactamase superfamily domain protein [Halorhabdus
tiamatea SARL4B]
Length = 583
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 51/120 (42%), Gaps = 18/120 (15%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARLVRMCL--------LVNP----SYIH 191
SA LTH H DHY LG G PIY + TA + L L NP + I
Sbjct: 53 SAILLTHAHLDHYRTLGSNLRDGAPIYATSETAAAITTRLDTDAEHADLANPGDVAAAIE 112
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLH---TGDFRASRLMQSYPLL 248
P+ T D V++ + A H PG R DG + H TGDF +R YP L
Sbjct: 113 PITDWTTITSD-VQIHPVPAGHAPGGCGFVVRFADGDDHHHLLATGDF-TTRRAAGYPGL 170
>gi|167032379|ref|YP_001667610.1| beta-lactamase domain-containing protein [Pseudomonas putida GB-1]
gi|166858867|gb|ABY97274.1| beta-lactamase domain protein [Pseudomonas putida GB-1]
Length = 477
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 62/154 (40%), Gaps = 30/154 (19%)
Query: 141 IKGCSAYFLTHFHYDHYGGLGKRWS---HGPIYCSPLTARLVRMCL-------------- 183
I+G A +TH H DH G + + GPI CS +ARL+ + L
Sbjct: 55 IQGIRALVITHVHLDHVGRIPALLAAGYRGPILCSEPSARLLPLVLEDAYKLTISSEPAQ 114
Query: 184 ----------LVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQC---Y 230
L+ P EH G ++ L A H G+A + +Q GQ Y
Sbjct: 115 VARYIDFIRDLIVPLPFEQWHTLVEHPGLGCRIRLQRAGHLLGSAYVECDMQHGQSNSRY 174
Query: 231 LHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCN 264
+ +GD A P+ R +VL L++TY +
Sbjct: 175 VFSGDLGACGNPLLRPVQPPERADVLVLESTYGD 208
>gi|383625845|ref|ZP_09950251.1| metallo-beta-lactamase superfamily domain-containing protein
[Halobiforma lacisalsi AJ5]
gi|448701481|ref|ZP_21699687.1| metallo-beta-lactamase superfamily domain-containing protein
[Halobiforma lacisalsi AJ5]
gi|445778370|gb|EMA29320.1| metallo-beta-lactamase superfamily domain-containing protein
[Halobiforma lacisalsi AJ5]
Length = 759
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 145 SAYFLTHFHYDHYGGLGKRWSHG-PIYCSPLTARL--------VRMCLLVNPSYI----H 191
+A LTH H DHY L + G PI+ SP TA + VR + +P I
Sbjct: 53 AAILLTHAHLDHYQSLDEAHRDGAPIFTSPGTAAILEDVLAEGVRHHSMSDPDSILERVE 112
Query: 192 PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQ---CYLHTGDF 236
++ + V D + V + A H PGA R +DGQ L TGDF
Sbjct: 113 AIDDWADVVGDDISVAPVPAGHTPGACGFLIRARDGQESFRALATGDF 160
>gi|150400309|ref|YP_001324076.1| beta-lactamase domain-containing protein [Methanococcus vannielii
SB]
gi|150013012|gb|ABR55464.1| beta-lactamase domain protein [Methanococcus vannielii SB]
Length = 635
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 51/210 (24%)
Query: 140 SIKGCSAYFLTHFHYDHYG---GLGKRWSHGPIYCSPLTARLVRMCLL------------ 184
SI A +TH H DH G GL + GP+YC+ T L M LL
Sbjct: 230 SIDEIDAVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDL--MTLLQKDYVEISEKEG 287
Query: 185 ---------VNPSYIHPLELN---TEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYL- 231
+ + H + L+ T + +K+TL A H G+A+ H + DG +
Sbjct: 288 KNVPYSSKDIKNAIKHTIPLDYGVTTDIAPAIKLTLHNAGHILGSAISHCHVGDGLYNVA 347
Query: 232 HTGD--FRASRLMQ----SYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDV----LNYVVR 281
+TGD F ASRL++ +P R+ L +++TY P +++ LN ++
Sbjct: 348 YTGDIKFEASRLLEPATCQFP-----RLETLIIESTYGGYDDVLPERDETEKEFLNVMLE 402
Query: 282 LTKNCLKKQPKTLVVVGAYSIGKESVFLAI 311
T K V++ + IG+ + +
Sbjct: 403 TTSRGGK------VIIPVFGIGRAQELMLV 426
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,150,865,359
Number of Sequences: 23463169
Number of extensions: 314665790
Number of successful extensions: 2562108
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 1628
Number of HSP's that attempted gapping in prelim test: 2545739
Number of HSP's gapped (non-prelim): 10874
length of query: 428
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 283
effective length of database: 8,957,035,862
effective search space: 2534841148946
effective search space used: 2534841148946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)