Query 014242
Match_columns 428
No_of_seqs 359 out of 3291
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 08:02:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b87_A DNA cross-LINK repair 1 100.0 1.6E-50 5.4E-55 408.2 31.1 308 118-428 26-333 (367)
2 3iek_A Ribonuclease TTHA0252; 100.0 1.7E-44 5.8E-49 372.0 31.5 308 111-427 21-391 (431)
3 2i7t_A Cleavage and polyadenyl 100.0 5.5E-41 1.9E-45 348.3 30.0 309 111-427 32-407 (459)
4 3zdk_A 5' exonuclease apollo; 100.0 1.1E-39 3.8E-44 325.3 27.9 276 125-428 6-289 (336)
5 3af5_A Putative uncharacterize 100.0 1.3E-38 4.5E-43 343.5 30.4 311 111-427 209-605 (651)
6 2xr1_A Cleavage and polyadenyl 100.0 6.8E-38 2.3E-42 337.2 32.5 310 111-427 204-594 (640)
7 2ycb_A Beta-CAsp RNAse, cleava 100.0 5.5E-38 1.9E-42 337.9 31.2 312 111-427 200-590 (636)
8 3zq4_A Ribonuclease J 1, RNAse 100.0 2.2E-32 7.6E-37 289.6 25.1 305 111-427 29-379 (555)
9 3bk2_A RNAse J, metal dependen 100.0 7.9E-31 2.7E-35 278.4 23.4 306 111-427 37-394 (562)
10 2i7x_A Protein CFT2; polyadeny 100.0 5.1E-31 1.7E-35 286.2 22.0 275 111-397 22-382 (717)
11 2az4_A Hypothetical protein EF 100.0 1.4E-26 4.8E-31 237.7 27.1 264 140-427 81-393 (429)
12 1zkp_A Hypothetical protein BA 99.8 4.3E-20 1.5E-24 177.2 11.0 196 111-322 50-260 (268)
13 2wyl_A L-ascorbate-6-phosphate 99.8 4.3E-19 1.5E-23 178.2 15.9 200 56-262 16-251 (360)
14 3bv6_A Metal-dependent hydrola 99.8 1.1E-18 3.6E-23 176.6 13.0 198 58-262 42-276 (379)
15 2cbn_A Ribonuclease Z; phospho 99.8 4.4E-19 1.5E-23 173.1 9.6 144 112-265 32-239 (306)
16 1y44_A Ribonuclease Z; zinc-de 99.8 6.6E-19 2.2E-23 173.2 9.9 144 112-265 30-237 (320)
17 3g1p_A Protein PHNP; C-P lyase 99.8 1.1E-18 3.8E-23 166.9 10.0 143 111-266 46-194 (258)
18 2e7y_A TRNAse Z; tRNA maturati 99.8 1.8E-18 6E-23 166.2 9.9 195 108-322 14-272 (280)
19 3md7_A Beta-lactamase-like; ss 99.7 3.6E-16 1.2E-20 152.3 12.9 165 114-302 78-265 (293)
20 3zwf_A Zinc phosphodiesterase 99.7 1.5E-16 5E-21 160.4 9.8 145 111-265 26-279 (368)
21 3kl7_A Putative metal-dependen 99.6 2E-15 6.8E-20 142.7 15.2 172 112-321 45-231 (235)
22 3jxp_A Coenzyme PQQ synthesis 99.6 9.3E-16 3.2E-20 151.7 8.4 150 112-264 49-227 (321)
23 3rpc_A Possible metal-dependen 99.6 2.7E-14 9.4E-19 136.9 14.1 115 143-264 64-195 (264)
24 2r2d_A AGR_PTI_140P, Zn-depend 99.4 4.5E-13 1.5E-17 128.3 10.5 99 142-241 102-219 (276)
25 2bib_A CBPE, teichoic acid pho 99.4 2.6E-13 8.7E-18 143.3 7.7 192 111-322 25-280 (547)
26 3m8t_A 'BLR6230 protein; subcl 99.4 4.5E-13 1.5E-17 129.4 8.3 126 111-239 62-206 (294)
27 1k07_A FEZ-1 beta-lactamase; m 99.4 6.9E-13 2.4E-17 126.4 9.3 125 111-238 32-177 (263)
28 1e5d_A Rubredoxin\:oxygen oxid 99.4 3E-13 1E-17 136.6 6.1 121 112-238 42-168 (402)
29 2ohh_A Type A flavoprotein FPR 99.3 1E-12 3.5E-17 132.8 8.2 121 111-237 42-172 (404)
30 3dha_A N-acyl homoserine lacto 99.3 2.4E-12 8.3E-17 121.8 9.9 97 142-241 99-201 (254)
31 1vjn_A Zn-dependent hydrolase 99.3 1.9E-11 6.5E-16 114.2 15.3 114 111-261 27-147 (220)
32 3hnn_A Putative diflavin flavo 99.3 3.2E-13 1.1E-17 129.1 2.1 118 113-236 51-175 (262)
33 1ycg_A Nitric oxide reductase; 99.3 2.5E-12 8.5E-17 129.7 8.2 120 112-237 43-168 (398)
34 3l6n_A Metallo-beta-lactamase; 99.3 1.6E-12 5.6E-17 120.1 5.2 121 111-238 38-161 (219)
35 4ax1_B Metallo-beta-lactamase 99.3 1.6E-11 5.5E-16 118.6 11.3 126 111-239 65-210 (303)
36 2xf4_A Hydroxyacylglutathione 99.3 2E-12 6.7E-17 118.9 4.1 120 112-240 23-156 (210)
37 1sml_A Protein (penicillinase) 99.3 1.3E-11 4.4E-16 118.0 9.9 126 111-239 45-188 (269)
38 3esh_A Protein similar to meta 99.3 4.2E-12 1.4E-16 122.3 6.3 126 111-241 55-212 (280)
39 4efz_A Metallo-beta-lactamase 99.2 3.2E-12 1.1E-16 124.5 5.0 127 112-240 27-179 (298)
40 3adr_A Putative uncharacterize 99.2 1.1E-11 3.9E-16 117.4 8.3 114 112-239 28-169 (261)
41 2q9u_A A-type flavoprotein; fl 99.2 9.6E-12 3.3E-16 126.3 6.0 121 112-238 48-174 (414)
42 3aj3_A MLR6805 protein, 4-pyri 99.2 7.1E-12 2.4E-16 119.9 4.8 126 111-240 42-212 (274)
43 1ztc_A Hypothetical protein TM 99.2 3.3E-12 1.1E-16 118.9 2.3 125 111-240 42-179 (221)
44 1p9e_A Methyl parathion hydrol 99.2 1.1E-11 3.8E-16 122.7 4.3 127 111-241 104-261 (331)
45 1m2x_A Class B carbapenemase B 99.2 2E-11 6.8E-16 113.4 5.6 121 111-239 34-158 (223)
46 2gcu_A Putative hydroxyacylglu 99.2 1.2E-11 4.2E-16 117.3 4.0 113 113-240 28-147 (245)
47 2zwr_A Metallo-beta-lactamase 99.2 1.2E-11 4E-16 113.7 3.8 117 111-240 20-149 (207)
48 4dik_A Flavoprotein; TM0755, e 99.2 4E-11 1.4E-15 122.2 7.8 148 77-237 26-182 (410)
49 2p18_A Glyoxalase II; metallop 99.1 3.8E-11 1.3E-15 118.0 6.7 115 112-240 50-185 (311)
50 2zo4_A Metallo-beta-lactamase 99.1 3.3E-11 1.1E-15 117.7 5.9 125 111-239 29-194 (317)
51 1a7t_A Metallo-beta-lactamase; 99.1 1.1E-11 3.8E-16 115.9 2.5 122 111-239 44-168 (232)
52 3tp9_A Beta-lactamase and rhod 99.1 1.6E-11 5.4E-16 127.3 2.8 122 111-240 25-154 (474)
53 2vw8_A PA1000, PQSE; quinolone 99.1 2.4E-11 8.3E-16 118.2 3.5 123 112-238 33-183 (303)
54 1mqo_A Beta-lactamase II; alph 99.1 2.4E-11 8.2E-16 113.2 3.1 122 111-239 48-172 (227)
55 4ad9_A Lactb2, beta-lactamase- 99.1 1.5E-11 5.2E-16 118.8 1.8 124 111-239 39-169 (289)
56 1qh5_A Glyoxalase II, protein 99.1 5.4E-11 1.8E-15 113.9 5.5 110 113-239 23-138 (260)
57 2qed_A Hydroxyacylglutathione 99.1 3.6E-11 1.2E-15 115.0 4.1 107 112-239 28-138 (258)
58 3r2u_A Metallo-beta-lactamase 99.1 1.7E-11 5.7E-16 127.1 1.7 121 112-240 47-174 (466)
59 4hl2_A Beta-lactamase NDM-1; s 99.1 6.5E-12 2.2E-16 118.3 -1.6 124 111-239 55-185 (243)
60 2fhx_A SPM-1; metallo-beta-lac 99.1 6.2E-11 2.1E-15 111.4 3.8 121 113-239 40-188 (246)
61 3q6v_A Beta-lactamase; metallo 99.0 6E-11 2.1E-15 110.3 2.4 124 111-240 33-173 (233)
62 1xm8_A Glyoxalase II; structur 99.0 1.6E-10 5.4E-15 110.3 4.2 110 113-239 23-135 (254)
63 1jjt_A IMP-1 metallo beta-lact 99.0 8E-11 2.7E-15 109.8 1.3 120 111-239 40-162 (228)
64 3iog_A Beta-lactamase; hydrola 99.0 1.1E-10 3.7E-15 108.1 1.9 120 111-238 30-168 (227)
65 2y8b_A Metallo-B-lactamase; hy 98.9 2.8E-09 9.7E-14 101.8 7.7 122 111-240 75-202 (265)
66 4eyb_A Beta-lactamase NDM-1; m 98.8 4.2E-10 1.4E-14 108.0 -1.1 125 111-240 82-213 (270)
67 2cfu_A SDSA1; SDS-hydrolase, l 98.8 7.5E-09 2.6E-13 111.5 7.3 124 111-239 130-303 (658)
68 2yhe_A SEC-alkyl sulfatase; hy 97.9 1.1E-08 3.9E-13 110.0 0.0 124 111-239 140-314 (668)
69 2p97_A Hypothetical protein; p 98.4 1.4E-08 4.7E-13 92.8 -1.3 110 111-240 31-142 (201)
70 2p4z_A Metal-dependent hydrola 98.3 7.9E-07 2.7E-11 85.8 6.8 60 111-176 40-104 (284)
71 3h3e_A Uncharacterized protein 97.2 9.1E-05 3.1E-09 70.9 1.4 54 116-176 40-93 (267)
No 1
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=100.00 E-value=1.6e-50 Score=408.21 Aligned_cols=308 Identities=51% Similarity=0.952 Sum_probs=268.4
Q ss_pred EcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCcccccCCCcEEeCHHHHHHHHHhhccCCCceEEcCCCc
Q 014242 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNT 197 (428)
Q Consensus 118 iDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~~~~~~i~~v~~~~ 197 (428)
..|++.+..++.++.||.|+...+.+|++|||||.|.||++|++.. ...+||+++.|.+++...++.....+++++.++
T Consensus 26 ~~~p~~~~~pG~~ilVD~f~~~~~~~IdaI~lTH~H~DHiggl~~~-~~~pIy~s~~t~~ll~~~l~~~~~~~~~l~~g~ 104 (367)
T 4b87_A 26 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKH-FTFPVYCSEITGNLLKNKLHVQEQYIHPLPLDT 104 (367)
T ss_dssp CCCCGGGBCTTSSEEESCCSSSSCTTCCEEECCCCCHHHHTTCSTT-CCSCEEECHHHHHHHHHHSCCCGGGEEECCBTS
T ss_pred CCCceEEEECCCeEEEeCCCcCCccCCcEEEECcChHHHhCCcccc-cCCcEEECHHHHHHHHHHhccccceEEEeCCCC
Confidence 5788877778888999999887788999999999999999999953 468999999999999887776556788999999
Q ss_pred EEEECCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCccccccccccCCCccEEEEecCCCCCCCCCCChHHHHH
Q 014242 198 EHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLN 277 (428)
Q Consensus 198 ~~~i~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~D~Li~E~Ty~~~~~~~ps~~~~~~ 277 (428)
++.+++++|++++++|++|+++++++.++|++++||||+++.+.... +.+...++|+||+||||+++.+.+|+++++.+
T Consensus 105 ~~~ig~~~v~~~~agH~~gs~~~~i~~~~g~~il~tGD~~~~~~~~~-~~l~~~~~D~Li~EsTy~~~~~~~ps~~~~~~ 183 (367)
T 4b87_A 105 ECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRADPSMER-SLLADQKVHMLYLDTTYCSPEYTFPSQQEVIR 183 (367)
T ss_dssp CEEETTEEEEEEECSSSTTCEEEEEECTTSCEEEECCSCCCCGGGGG-SGGGTSCCCEEEECCTTCSTTCCCCCHHHHHH
T ss_pred EEEECCEEEEEEeCCCcCCcEEEEEEcCCCcEEEEecCcccCcccch-hhhccCCCCEEEEecccCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999767778999999999887653 44445789999999999998888999999998
Q ss_pred HHHHHHHHHHHhCCCeEEEEccccccHHHHHHHHHHHcCCeEEEechHHHHHHhcCCCcccCCceecCCCceEEEeecCC
Q 014242 278 YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357 (428)
Q Consensus 278 ~l~~~i~~~l~~g~~~lvli~~~slGreqell~i~~~~~~~I~v~~~~~~i~~~~~~~~~~~~~~~d~~~~~I~v~~~~~ 357 (428)
++++.+.+.++.+++.+|++++|++||+|+++++++++|+||++++.++++++++++|++...+|+|+.+++||++++..
T Consensus 184 ~~~~~i~~~~~~~g~~~v~~~a~~igr~q~ll~ia~~~g~ki~v~~~~~~il~~l~~~~~~~~~t~d~~~~~vh~~~~~~ 263 (367)
T 4b87_A 184 FAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 263 (367)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESSSCCHHHHHHHHHHTTCCEECCHHHHHHHHTTCCTTHHHHEESCGGGCSEEEEEGGG
T ss_pred HHHHHHHHHHHhCCCeEEEEccchhHHHHHHHHHHHHhCCEEEEeHHHHHHHHhcCCchhhhhcccCCccceEEEeecCc
Confidence 88888888888888888899999999999999999999999999999999999999998888899999999999999999
Q ss_pred CChhhHHHHHhhhcCCCCcEEEEeeccccccCCCCCcccccCCCcCCCEEEEEEccccCCCHHHHHHHHhC
Q 014242 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428 (428)
Q Consensus 358 l~~g~~~~~~~~~~~~~~~~i~~~ptG~~~~~t~g~~l~~~~~~~~~~~~i~~i~~S~Hs~~~eL~~fv~~ 428 (428)
++...+..|++++.+++.++|.|+||||+...... .+..+.|..++++.+|.||||+|||++||.+||++
T Consensus 264 ~~~~~l~~~~~~~~~~~~~~v~~~ptgw~~~~~~~-~~~~~~~~~~~~~~~~~vpySeHss~~EL~~fv~~ 333 (367)
T 4b87_A 264 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFT-RIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQW 333 (367)
T ss_dssp CSHHHHHHHHHSGGGCCCEEEEEEECC-----------CCCCCEEETTEEEEEECCCSSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhcccccEEEEcCcccccCCCCC-cccccccccCCceEEEEEeccCCCCHHHHHHHHHh
Confidence 99999999999999999999999999999865421 23334555578899999999999999999999974
No 2
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=100.00 E-value=1.7e-44 Score=371.99 Aligned_cols=308 Identities=19% Similarity=0.253 Sum_probs=244.3
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCcccc---cCCCcEEeCHHHHHHHHHhhc---
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLL--- 184 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~--- 184 (428)
.++..+|+|||...... ....+..+. ....+||+|||||+|.||+||++.+ .+..+||+++.+.+++...+.
T Consensus 21 ~~~~~iLID~G~~~~~~-~~~~~~~~~-~~~~~Id~VllTH~H~DH~gglp~l~~~~~~~~Iy~t~~t~~l~~~~l~d~~ 98 (431)
T 3iek_A 21 AGGRRVLLDCGMFQGKE-EARNHAPFG-FDPKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVLLMEIVLEDAL 98 (431)
T ss_dssp ETTEEEEECCCCCCGGG-GGGGGSCCS-SCGGGCCEEECSCCCHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCcchh-hccchhhcC-CCcccCCEEEECCCChHHhccHHHHHHcCCCCeEEEcHHHHHHHHHHHHHHH
Confidence 57889999999943210 000111111 1346899999999999999999964 356899999999987765432
Q ss_pred -cCC-------------CceEEcCCCcEEEECCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCccccccccccC
Q 014242 185 -VNP-------------SYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVN 250 (428)
Q Consensus 185 -~~~-------------~~i~~v~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~~~~~~~~l~~ 250 (428)
... ..++++++++++.+++++|+++++||++|++++.++. ++++++||||++..+..........
T Consensus 99 ~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~agH~~Gs~~~~i~~-~~~~ilfsGD~~~~~~~~l~~~~~~ 177 (431)
T 3iek_A 99 KVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGHLPGSAFVVAQG-EGRTLVYSGDLGNREKDVLPDPSLP 177 (431)
T ss_dssp HHCSSCSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEECCSSTTCEEEEEEE-TTEEEEECCCCCCTTSSSSCCCCBC
T ss_pred hhcccCCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeCCCCcCceEEEEEE-CCEEEEEeCCCCCCCCcccCCcccc
Confidence 111 3578899999999999999999999999999999997 6679999999998766543211124
Q ss_pred CCccEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEccccccHHHHHHHHHHHcC-----CeEEEec-h
Q 014242 251 HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG-----VKIYANA-S 324 (428)
Q Consensus 251 ~~~D~Li~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~~g~~~lvli~~~slGreqell~i~~~~~-----~~I~v~~-~ 324 (428)
.++|+||+||||+++. |+++++..+++.+.++++++++++ |+||+|++||.||++.+++++. +|||+++ +
T Consensus 178 ~~~D~LI~EsTy~~~~--h~~~~~~~~~l~~~i~~~~~~gg~--vlIp~fa~gR~qell~~l~~~~~~~~~~pi~~~s~~ 253 (431)
T 3iek_A 178 PLADLVLAEGTYGDRP--HRPYRETVREFLEILEKTLSQGGK--VLIPTFAVERAQEILYVLYTHGHRLPRAPIYLDSPM 253 (431)
T ss_dssp CCCSEEEEECTTTTCC--CCCHHHHHHHHHHHHHHHHHTTCE--EEEECCTTTHHHHHHHHHHHHGGGSCCCCEEEECHH
T ss_pred CCccEEEEEcccCCcC--CCChHHHHHHHHHHHHHHHHcCCe--EEEEeccchHHHHHHHHHHHHHHhccCCCEEEeChH
Confidence 7899999999999876 488999999999999999988875 9999999999999999998875 8999996 5
Q ss_pred HHHHHHhc------------------CCCcccCCcee-----------cCCCceEEEeecCCCChhhHHHHHhhhcCCCC
Q 014242 325 RRRVLQSF------------------DWPELSGNLCT-----------QGNDTLLHVLPMSSLKFETLKDYLKPYGNQYA 375 (428)
Q Consensus 325 ~~~i~~~~------------------~~~~~~~~~~~-----------d~~~~~I~v~~~~~l~~g~~~~~~~~~~~~~~ 375 (428)
..++.+.+ ..|+.++++.. +..+|+|+++++|||++|++++|++.+.++++
T Consensus 254 a~~~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~p~viia~~gm~~~G~~~~~l~~~~~~~~ 333 (431)
T 3iek_A 254 AGRVLSLYPRLVRYFSEEVQAHFLQGKNPFRPAGLEVVEHTEASKALNRAPGPMVVLAGSGMLAGGRILHHLKHGLSDPR 333 (431)
T ss_dssp HHHHHHHGGGGGGGSCHHHHHHHHTTSCTTCCTTEEECCSHHHHHHHHHSCSSEEEEESCTTSSSSHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCeEEeCCHHHHHHHhcCCCCeEEEecCCCCCCChHHHHHHHhcCCCC
Confidence 44444332 12443343321 24789999999999999999999999999999
Q ss_pred cEEEEeeccccccCCCCCcccccCC-------CcCCCEEEEEE-ccccCCCHHHHHHHHh
Q 014242 376 AVLAFRPTGWTYSETVGNQLDLIRP-------LSRGNITIYGV-PYSEHSSFTELREFVQ 427 (428)
Q Consensus 376 ~~i~~~ptG~~~~~t~g~~l~~~~~-------~~~~~~~i~~i-~~S~Hs~~~eL~~fv~ 427 (428)
|.|+| +|||+++|+||+|+.-.. ..+.+++|+.+ .||+|||++||++|++
T Consensus 334 n~ii~--~gyq~~gt~g~~l~~~~~~v~~~g~~~~v~a~v~~~~~~saHad~~~l~~~~~ 391 (431)
T 3iek_A 334 NALVF--VGYQPQGGLGAEIIARPPAVRILGEEVPLRASVHTLGGFSGHAGQDELLDWLQ 391 (431)
T ss_dssp CEEEE--CSCCCTTSHHHHHHTCCSEEEETTEEEECCSEEEECGGGCSSCCHHHHHHHHT
T ss_pred CeEEE--ECCCCCCChHHHhhcCCcEEEECCEEEEEEEEEEEECCccccCCHHHHHHHHH
Confidence 99999 999999999998864221 12347899999 6999999999999986
No 3
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=100.00 E-value=5.5e-41 Score=348.26 Aligned_cols=309 Identities=15% Similarity=0.248 Sum_probs=230.2
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCcccc----cCCCcEEeCHHHHHHHHHhhcc-
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR----WSHGPIYCSPLTARLVRMCLLV- 185 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~----~~~~~Iy~s~~t~~~l~~~~~~- 185 (428)
.++..+|+|||......+.. .++.+......+||+|||||+|.||+||++.+ .++.+||+++.+..++...+..
T Consensus 32 ~~~~~iLID~G~~~~~~~~~-~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~~~~iy~t~~t~~l~~~~l~d~ 110 (459)
T 2i7t_A 32 FKGRKIMLDCGIHPGLEGMD-ALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDY 110 (459)
T ss_dssp ETTEEEEECCCCCTTSCGGG-GSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSCCSEEEEEHHHHHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCcCccccc-ccCcccccCcccCcEEEECCCChhhhhhhHHHHHhcCCCCCEEechHHHHHHHHHHHHH
Confidence 56789999999864321111 11111112346899999999999999999964 2467999999998766543311
Q ss_pred ---C-----------------CCceEEcCCCcEEEECCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCcccccc
Q 014242 186 ---N-----------------PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSY 245 (428)
Q Consensus 186 ---~-----------------~~~i~~v~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~~~~~~ 245 (428)
. ...++++++++++.+++++|+++++||++|+++++++. ++++++||||+...++....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~GH~~Gs~~~~i~~-~~~~il~sGD~~~~~~~~~~ 189 (459)
T 2i7t_A 111 VKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEI-AGVKLLYTGDFSRQEDRHLM 189 (459)
T ss_dssp CC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEECCSSTTCEEEEEEE-TTEEEEECCSCCCC-----C
T ss_pred HHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEEeCCCccCcEEEEEEE-CCcEEEEeCCCCCCCCcccC
Confidence 0 12578899999999999999999999999999999997 56799999999997765422
Q ss_pred -ccccCCCccEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEccccccHHHHHHHHHHHc--------C
Q 014242 246 -PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKAL--------G 316 (428)
Q Consensus 246 -~~l~~~~~D~Li~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~~g~~~lvli~~~slGreqell~i~~~~--------~ 316 (428)
..+...++|+||+|+||+.+. ++++.+..+++.+.+.++++.+++ |+||+|++||.|+++.+++++ +
T Consensus 190 ~~~~~~~~~D~Li~Esty~~~~--~~~~~~~~~~l~~~i~~~~~~~g~--vlip~fa~gr~qell~~l~~~~~~~~~~~~ 265 (459)
T 2i7t_A 190 AAEIPNIKPDILIIESTYGTHI--HEKREEREARFCNTVHDIVNRGGR--GLIPVFALGRAQELLLILDEYWQNHPELHD 265 (459)
T ss_dssp CCCCCSSCCSEEEEECTTTTCC--CCCHHHHHHHHHHHHHHHHHTTCE--EEEECCSSSSHHHHHHHHHHHHHHCGGGTT
T ss_pred CCCcCCCCCeEEEECCCCCCCC--CCChHHHHHHHHHHHHHHHHCCCE--EEEEecchhHHHHHHHHHHHHHHhcCCCCC
Confidence 122236899999999999864 488888899999999999988765 999999999999999887654 6
Q ss_pred CeEEEech-HH---HHHHhcC--------------CCcccCCce---e----cCCCceEEEeecCCCChhhHHHHHhhhc
Q 014242 317 VKIYANAS-RR---RVLQSFD--------------WPELSGNLC---T----QGNDTLLHVLPMSSLKFETLKDYLKPYG 371 (428)
Q Consensus 317 ~~I~v~~~-~~---~i~~~~~--------------~~~~~~~~~---~----d~~~~~I~v~~~~~l~~g~~~~~~~~~~ 371 (428)
+|||+++. .. ++++.+. .|+.++++. + +..+|+|++++++||++|+++.+++.|.
T Consensus 266 ~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~viia~~gm~~~g~~~~~l~~~~ 345 (459)
T 2i7t_A 266 IPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 345 (459)
T ss_dssp SCEEEC---------------------------------CCSEEECCCTTSSCCCSSEEEEESCTTCSSHHHHHHHHHHT
T ss_pred ccEEEECHHHHHHHHHHHHHHHHHhHHHHHHhcccCCcCCCcceeeCCHHHhcCCCCeEEEEcCcccCCCHHHHHHHHHc
Confidence 89999963 22 3344331 122122221 1 2468999999999999999999999999
Q ss_pred CCCCcEEEEeeccccccCCCCCcccccCC--------CcCCCEEEEEEccccCCCHHHHHHHHh
Q 014242 372 NQYAAVLAFRPTGWTYSETVGNQLDLIRP--------LSRGNITIYGVPYSEHSSFTELREFVQ 427 (428)
Q Consensus 372 ~~~~~~i~~~ptG~~~~~t~g~~l~~~~~--------~~~~~~~i~~i~~S~Hs~~~eL~~fv~ 427 (428)
++++|+|+| +||++++|+|++|+.-.. ....+++++.++||+|||++||++||+
T Consensus 346 ~~~~~~ii~--~gy~~~gt~g~~l~~~~~~~~~~~g~~~~~~~~v~~~~~S~Had~~~l~~~i~ 407 (459)
T 2i7t_A 346 TDKRNGVII--AGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIR 407 (459)
T ss_dssp TCTTCEEEE--CSCCCTTSHHHHHTTCCSEEECTTSCEEECCSEEEECCCSCCCCHHHHHHHHH
T ss_pred CCCCCeEEE--EecCCCCChHHHHhhCCceeeeeCCcEEEEEEEEEEeeecccCCHHHHHHHHH
Confidence 999999999 999999999987753111 112367899999999999999999986
No 4
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=325.25 Aligned_cols=276 Identities=32% Similarity=0.577 Sum_probs=230.2
Q ss_pred CCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCcccccCCCcEEeCHHHHHHHHHhhccCCCceEEcCCCcEEEE---
Q 014242 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI--- 201 (428)
Q Consensus 125 ~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~~~~~~i~~v~~~~~~~i--- 201 (428)
.+++.++.||.|++..+.+|++|||||+|.||+|||+.++ +.+||+++.|+++++..++.....+++++.++++.+
T Consensus 6 ~i~g~~i~vD~f~~~~~~~i~ai~lTH~H~DHiggl~~l~-~~pVy~s~~t~~ll~~~l~~~~~~~~~~~~~~~~~i~~~ 84 (336)
T 3zdk_A 6 LIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTW-ARPLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLD 84 (336)
T ss_dssp ECTTSSEEESCCCHHHHCSSCEEECCCCCGGGSTTCSTTC-CSCEEECHHHHHHHHHHHCCCTTTEEECCTTSEEEEESS
T ss_pred EeCCCCEeecCCcccCCCCCCEEEECCChHHHHCchHHHc-CCCEEecHHHHHHHHHhhhhcccceEecCCCCeEEecCc
Confidence 3567889999998755678999999999999999999876 789999999999998887766557888999998877
Q ss_pred ----CCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCccccccccc-cCCCccEEEEecCCCCCCCCCCChHHHH
Q 014242 202 ----DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVL 276 (428)
Q Consensus 202 ----~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~~~~~~~~l-~~~~~D~Li~E~Ty~~~~~~~ps~~~~~ 276 (428)
++++|++++++|++|+++|.++. ++++|+||||+++.+.....+.+ ...++|+||+||||+++.+.+|+++++.
T Consensus 85 ~~~~g~~~v~~~~~~H~~gs~~~~i~~-~~~~i~~tGD~~~~~~~~~~~~l~~~~~vD~Li~DsT~~~~~~~~pse~~v~ 163 (336)
T 3zdk_A 85 EIGQETMTVTLLDANHCPGSVMFLFEG-YFGTILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAA 163 (336)
T ss_dssp SSSSCEEEEEEEECSSSTTCEEEEEEE-TTEEEEECCSCCCCGGGGGCGGGSSCCCCSEEEECCTBCCTTCCCCCHHHHH
T ss_pred ccccCCEEEEEEECCCCcceEEEEEEe-CCceEEEeCCCCCCcccccchhhhccCCccEEEEecCCCCCCCCCCCHHHHH
Confidence 78999999999999999999998 45699999999998876543333 2578999999999999888889999888
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccccccHHHHHHHHHHHcCCeEEEechHHHHHHhcCCCcccCCceecCCCceEEEeecC
Q 014242 277 NYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMS 356 (428)
Q Consensus 277 ~~l~~~i~~~l~~g~~~lvli~~~slGreqell~i~~~~~~~I~v~~~~~~i~~~~~~~~~~~~~~~d~~~~~I~v~~~~ 356 (428)
+.+.+.+++. ++..|+|++|++||+|+++++++++|++|++++..+++++.+|++ +.+++++....|+++...
T Consensus 164 ~~l~~~i~~~----~~g~vii~~f~vgR~q~i~~~a~~~grkV~v~gr~~~~~~~lg~~---~~~~~~~~~~~i~~~~~~ 236 (336)
T 3zdk_A 164 HQIVQLIRKH----PQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA---DVFTVEEKAGRIHAVDHM 236 (336)
T ss_dssp HHHHHHHHTC----TTSEEEEEECSSSCHHHHHHHHHHHTCCEECCHHHHHHHHHTTCC---SCEESCGGGCSEEEEEGG
T ss_pred HHHHHHHHhC----CCCcEEEeecchHHHHHHHHHHHHcCCEEEEEhHHHHHHHhcCCc---cccCCHhHcCCCCcchhh
Confidence 8887776643 223699999999999999999999999999999999999999976 357777788899999877
Q ss_pred CCChhhHHHHHhhhcCCCCcEEEEeeccccccCCCCCcccccCCCcCCCEEEEEEccccCCCHHHHHHHHhC
Q 014242 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQV 428 (428)
Q Consensus 357 ~l~~g~~~~~~~~~~~~~~~~i~~~ptG~~~~~t~g~~l~~~~~~~~~~~~i~~i~~S~Hs~~~eL~~fv~~ 428 (428)
.+... .+.+++ +....|.++||||..++.. ++ ++.|+||+||+++||++|+++
T Consensus 237 ~i~~~----al~r~~-~~~~~i~i~~S~~~ipg~~-----------~~---~~~vh~S~Ha~~~EL~~~~~~ 289 (336)
T 3zdk_A 237 EICHS----NMLRWN-QTHPTIAILPTSRKIHSSH-----------PD---IHVIPYSDHSSYSELRAFVAA 289 (336)
T ss_dssp GCSHH----HHHHHH-HHSCEEEEEECSSCCCCSS-----------TT---EEEECCCSSCBHHHHHHHHHH
T ss_pred eeHHH----HHHhhh-CcCCeEEEEeccccccCCc-----------cC---ceeeEecCCCCHHHHHHHHHH
Confidence 66632 234444 4456788999998776521 12 578999999999999999863
No 5
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=100.00 E-value=1.3e-38 Score=343.46 Aligned_cols=311 Identities=20% Similarity=0.250 Sum_probs=238.8
Q ss_pred cCCceEEEcCCCCCCCC--CcceEecCCCc--C--CC--CCccEEEeCCCchhhhCCccccc----CCCcEEeCHHHHHH
Q 014242 111 HLKKIVDRSCPFYKKIP--GTPFTVDAFRY--G--SI--KGCSAYFLTHFHYDHYGGLGKRW----SHGPIYCSPLTARL 178 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~--~~~~~iD~f~~--~--~i--~~id~v~iTH~H~DHiggL~~~~----~~~~Iy~s~~t~~~ 178 (428)
.++..+|+|||...... +. ..++.+.. . .. .+||+|||||+|.||+||++.+. ++.+||+++.+..+
T Consensus 209 ~~~~~ILID~G~~~~~~~~g~-~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~~~~~~~pIy~t~~t~~l 287 (651)
T 3af5_A 209 TDESFVLVDFGVNVAMLNDPY-KAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDL 287 (651)
T ss_dssp ESSCEEEECCCCCGGGTTCHH-HHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHHTTCCCSCEEECHHHHHH
T ss_pred ECCcEEEEeCCCChhccccch-hhcccccchhhccCcccCCCCEEEECCCChHhhcCHHHHHhcCCCCceEEEcHHHHHH
Confidence 56789999999864311 11 11222210 1 23 67999999999999999999643 47899999999887
Q ss_pred HHHhhc-----------cCC----------CceEEcCCCcEEEE-CCEEEEEEEcccCCCceEEEEEeeCCc--EEEEeC
Q 014242 179 VRMCLL-----------VNP----------SYIHPLELNTEHVI-DGVKVTLLEANHCPGAALIHFRLQDGQ--CYLHTG 234 (428)
Q Consensus 179 l~~~~~-----------~~~----------~~i~~v~~~~~~~i-~~~~V~~~~a~H~~Gs~~~~~~~~~g~--~ilytG 234 (428)
+...+. ... ..++++++++++.+ ++++|+++++||++|++++.++.+ +. +++|||
T Consensus 288 l~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~~~~i~~~-~~~~~ilftG 366 (651)
T 3af5_A 288 MVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSAIVHLHIG-NGLHNIAITG 366 (651)
T ss_dssp HHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCEEEEEEET-TTTTCEEECC
T ss_pred HHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEecCCCCcCcEEEEEEEC-CCceEEEEeC
Confidence 654332 000 14678999999999 999999999999999999999974 45 899999
Q ss_pred CCCCCcccccccc-ccCCCccEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEccccccHHHHHHHHHH
Q 014242 235 DFRASRLMQSYPL-LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISK 313 (428)
Q Consensus 235 D~~~~~~~~~~~~-l~~~~~D~Li~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~~g~~~lvli~~~slGreqell~i~~ 313 (428)
|++..++....+. ....++|+||+||||+++..+|+++....+.+.+.++++++++++ |+||+|++||.|+++.+++
T Consensus 367 D~~~~~~~ll~~~~~~~~~~DvLI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~l~~~g~--vlIp~favgR~qell~~l~ 444 (651)
T 3af5_A 367 DFKFIPTRLLEPANAKFPRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGK--VLIPAMAVGRAQEVMMVLE 444 (651)
T ss_dssp SCCCSCCSSCCCCCCBCSSCSEEEEECTTCSTTCCCCCHHHHHHHHHHHHHHHHHTTCE--EEEECCTTTHHHHHHHHHH
T ss_pred CCCCCcccccccccccCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCE--EEEeccCccHHHHHHHHHH
Confidence 9998776432221 234789999999999998767899999999999999999887764 9999999999999999998
Q ss_pred HcC------CeEEEechHHHHHHhc-------------------CCCcccCCcee-----------cCCCceEEEeecCC
Q 014242 314 ALG------VKIYANASRRRVLQSF-------------------DWPELSGNLCT-----------QGNDTLLHVLPMSS 357 (428)
Q Consensus 314 ~~~------~~I~v~~~~~~i~~~~-------------------~~~~~~~~~~~-----------d~~~~~I~v~~~~~ 357 (428)
+++ +|||++++..++.+.+ ..|+....+.. ...+|+|++++++|
T Consensus 445 ~~~~~~~l~~~I~~dg~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~v~~~~~~~~~~~~~~~~vIia~~gm 524 (651)
T 3af5_A 445 EYARIGGIEVPIYLDGMIWEATAIHTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRERQDIIDSNEPAIIIASSGM 524 (651)
T ss_dssp HHHTTTCCCSCEEEESSHHHHHHHHHTCGGGSCHHHHHHTTTSSCCSTTCTTEEECCSHHHHHHHHHSCSCEEEEESCTT
T ss_pred HhhhhcCCCCcEEEechHHHHHHHHHHhHHhcCHHHHHHHHhccCCCccCCceEEcCCHHHHHHHhcCCCCEEEEECCCC
Confidence 765 4999999865543322 11221111111 12689999999999
Q ss_pred CChhhHHHHHhhhcCCCCcEEEEeeccccccCCCCCcccc----cCC--------CcCCCEEEEEEc-cccCCCHHHHHH
Q 014242 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL----IRP--------LSRGNITIYGVP-YSEHSSFTELRE 424 (428)
Q Consensus 358 l~~g~~~~~~~~~~~~~~~~i~~~ptG~~~~~t~g~~l~~----~~~--------~~~~~~~i~~i~-~S~Hs~~~eL~~ 424 (428)
+++|++..++++++.+++|.|+| +||+.++|+|++|.. ++. ....++.++.+. ||+|||++||++
T Consensus 525 ~~gg~~~~~l~~~~~~~~~~vi~--sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~ 602 (651)
T 3af5_A 525 LVGGPSVEYFKQLAPDPKNSIIF--VSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTIDGFSGHADRRELMN 602 (651)
T ss_dssp SSSSHHHHHHHHHTTCTTCEEEE--CSCCCTTCHHHHHHHTCSEEEEECGGGCEEEEECCSEEEECGGGCSSCCHHHHHH
T ss_pred CCCCHHHHHHHHHhCCCCCEEEE--eCCCCCCcHHHHHHhccceeeehhcCCCceEEEeEEEEEEcCcccCcCCHHHHHH
Confidence 99999999999999999999999 999999998887642 110 011345678898 999999999999
Q ss_pred HHh
Q 014242 425 FVQ 427 (428)
Q Consensus 425 fv~ 427 (428)
|++
T Consensus 603 ~i~ 605 (651)
T 3af5_A 603 YVA 605 (651)
T ss_dssp HHH
T ss_pred HHH
Confidence 985
No 6
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=100.00 E-value=6.8e-38 Score=337.17 Aligned_cols=310 Identities=21% Similarity=0.306 Sum_probs=231.2
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCc--C-CCCCccEEEeCCCchhhhCCcccc---cCCCcEEeCHHHHHHHHHhhc
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRY--G-SIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLL 184 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~--~-~i~~id~v~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~ 184 (428)
.++..+|+|||..... + ...++.+.. . ...+||+|||||+|.||+||++.+ .++.+||+++.+..++...+.
T Consensus 204 ~~~~~ILID~G~~~~~-~-~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~~~~~~Iy~t~~t~~ll~~~l~ 281 (640)
T 2xr1_A 204 TPESRILIDCGVNVGS-D-ENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQL 281 (640)
T ss_dssp CSSCEEEECCCCBCSS-C-SSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCccc-c-ccccccccccccCCcccCcEEEECCCChhhhccHHHHHhcCCCCeEEECHHHHHHHHHHHH
Confidence 5678999999986432 1 112232221 2 346899999999999999999964 457899999999877654322
Q ss_pred ----------cC-C----------CceEEcCCCcEEEE-CCEEEEEEEcccCCCceEEEEEeeCCc--EEEEeCCCCCCc
Q 014242 185 ----------VN-P----------SYIHPLELNTEHVI-DGVKVTLLEANHCPGAALIHFRLQDGQ--CYLHTGDFRASR 240 (428)
Q Consensus 185 ----------~~-~----------~~i~~v~~~~~~~i-~~~~V~~~~a~H~~Gs~~~~~~~~~g~--~ilytGD~~~~~ 240 (428)
.. . ..++++.+++++.+ ++++|+++++||++|++++.++.+ +. +++||||++...
T Consensus 282 d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~Gs~~~~i~~~-~~~~~ilftGD~~~~~ 360 (640)
T 2xr1_A 282 DYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIG-DGLHNVVFTGDYKYEK 360 (640)
T ss_dssp HHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCEEEEEEET-TTTEEEEECCSCCSSC
T ss_pred HHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCCCCcCcEEEEEEEC-CceEEEEEECCCCCCC
Confidence 00 0 14678999999999 999999999999999999999984 45 899999999876
Q ss_pred ccccccc-ccCCCccEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEccccccHHHHHHHHHHHcC---
Q 014242 241 LMQSYPL-LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG--- 316 (428)
Q Consensus 241 ~~~~~~~-l~~~~~D~Li~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~~g~~~lvli~~~slGreqell~i~~~~~--- 316 (428)
.....+. ....++|+|++||||+++...|+++.+..+++.+.+++.++.+++ |+||+|++||.|+++.++++++
T Consensus 361 ~~ll~~~~~~~~~~DvLi~EsT~g~~~~~h~s~~~~~~~l~~~i~~~~~~~g~--vlIp~favGR~qell~~l~~~~~~~ 438 (640)
T 2xr1_A 361 TRLFDPAVNKFPRVETVISEATYGNANAFQPALKDAEKHLQMVVKNTIERGGI--AVIPAFAVGRSQEVMIVLEESIRKG 438 (640)
T ss_dssp CSSCCCCCCBCSCCSEEEEECTTCSTTCCCCCHHHHHHHHHHHC--------C--EEEECCTTTHHHHHHHHHHHHHHHT
T ss_pred ccccccccccCCCCcEEEECCCCCCCccCCCCHHHHHHHHHHHHHHHHhcCCe--EEEEecccchHHHHHHHHHHHHHhC
Confidence 5332221 234689999999999987756799999999999999988877766 9999999999999999998765
Q ss_pred ----CeEEEechHHHHH---Hhc-C---------------CCcccCCcee--------c--C-CCceEEEeecCCCChhh
Q 014242 317 ----VKIYANASRRRVL---QSF-D---------------WPELSGNLCT--------Q--G-NDTLLHVLPMSSLKFET 362 (428)
Q Consensus 317 ----~~I~v~~~~~~i~---~~~-~---------------~~~~~~~~~~--------d--~-~~~~I~v~~~~~l~~g~ 362 (428)
+|||++++..+.. +.+ + .|+....+.. . . .+|+|++++++|+++|+
T Consensus 439 ~~~~~~V~~dg~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~vIiat~gm~~gg~ 518 (640)
T 2xr1_A 439 LIPEVPVYLDGMIWEATAIHATHPEYLNNDLRKLIFQKGQNPFLSECFKPVDSHEARQKIIQNPQPCVILATSGMMNGGP 518 (640)
T ss_dssp SSCCCCEEEESSHHHHHHHHHHCGGGSCHHHHHHC------CTTCTTEEEEC-CHHHHHC----CCCEEEESCTTSSSSH
T ss_pred CCCCCcEEEEhHHHHHHHHHHHhHhhhcHHHHHHHHhcccCcccCCceEEeCCHHHHHHHhcCCCCeEEEeCCCccCCCh
Confidence 5999999765533 322 1 1221111111 1 2 67999999999999999
Q ss_pred HHHHHhhhcCCCCcEEEEeeccccccCCCCCcccc----cCC--------CcCCCEEEEEEc-cccCCCHHHHHHHHh
Q 014242 363 LKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL----IRP--------LSRGNITIYGVP-YSEHSSFTELREFVQ 427 (428)
Q Consensus 363 ~~~~~~~~~~~~~~~i~~~ptG~~~~~t~g~~l~~----~~~--------~~~~~~~i~~i~-~S~Hs~~~eL~~fv~ 427 (428)
+..++++++.+++|.|+| +||+.++|+|++|.. ++. ....++.++.+. ||+|||++||++|++
T Consensus 519 ~~~~l~~~~~~~~~~vi~--sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~~i~ 594 (640)
T 2xr1_A 519 VMEYFKAFAEDPRNTLVF--VGYQADGTIGRRIQKGWKEIPMTGKNGSTEMLKMNMEVQVVDGFSGHSDRRQLMEYVK 594 (640)
T ss_dssp HHHHHHHHSSCTTCEEEE--CSCCCTTCHHHHHHTTCCC-----------CCCCCSEEEECCCCSCSCCHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEE--ecCCCCCCHHHHHhhccceeeeeccCCCceEEeeeEEEEEEccccccCCHHHHHHHHH
Confidence 999999999999999999 999999998887642 110 112456788998 999999999999986
No 7
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=5.5e-38 Score=337.87 Aligned_cols=312 Identities=19% Similarity=0.260 Sum_probs=238.2
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCC--cCCCCCccEEEeCCCchhhhCCcccc---cCCCcEEeCHHHHHHHHHhhc-
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFR--YGSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLL- 184 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~--~~~i~~id~v~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~- 184 (428)
.++..+|+|||...........++.+. .....+||+|||||+|.||+||++.+ .++.+||+++.+..++...+.
T Consensus 200 ~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~~~~~~Iy~t~~t~~l~~~~l~d 279 (636)
T 2ycb_A 200 TPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLD 279 (636)
T ss_dssp CSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhcCCCCeEEEcchHHHHHHHHHHH
Confidence 567889999998643210001122221 12447899999999999999999964 457899999999887654322
Q ss_pred ---------cC-C----------CceEEcCCCcEEEE-CCEEEEEEEcccCCCceEEEEEeeCCc--EEEEeCCCCCCcc
Q 014242 185 ---------VN-P----------SYIHPLELNTEHVI-DGVKVTLLEANHCPGAALIHFRLQDGQ--CYLHTGDFRASRL 241 (428)
Q Consensus 185 ---------~~-~----------~~i~~v~~~~~~~i-~~~~V~~~~a~H~~Gs~~~~~~~~~g~--~ilytGD~~~~~~ 241 (428)
.. . ..+.++.+++++.+ ++++|+++++||++|++++.++.+ +. +++||||++....
T Consensus 280 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~~~~i~~~-~~~~~ilftGD~~~~~~ 358 (636)
T 2ycb_A 280 HIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAMAHLHIG-DGQHNMVYTGDFKYEQS 358 (636)
T ss_dssp HHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSSTTCEEEEEEET-TTTTCEEECCSCCSSCC
T ss_pred HHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCCCcEEEEEEEC-CCeEEEEEECCCCCCcc
Confidence 00 0 14678999999999 999999999999999999999984 45 8999999998776
Q ss_pred cccccc-ccCCCccEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEccccccHHHHHHHHHHHcC----
Q 014242 242 MQSYPL-LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG---- 316 (428)
Q Consensus 242 ~~~~~~-l~~~~~D~Li~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~~g~~~lvli~~~slGreqell~i~~~~~---- 316 (428)
...... ....++|+||+||||+++...|+++++..+++.+.++++++.+++ ++||+|++||.|+++.++++++
T Consensus 359 ~ll~~~~~~~~~~D~LI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~~~~~g~--vlIp~fa~GR~qell~~l~~~~~~~~ 436 (636)
T 2ycb_A 359 RLLEAAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGK--ILIPVFAVGRAQELMIVLEEYIRTGI 436 (636)
T ss_dssp SSSCCCCCCCSCCSEEEEECTTCSGGGCCCCHHHHHHHHHHHHHHHHHHTCC--EEEECCTTTHHHHHHHHHHHHHHTTS
T ss_pred cccCCcccCCCCCeEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCE--EEEEECCCcHHHHHHHHHHHHHHhCC
Confidence 432221 224689999999999987655799999999999999999888876 9999999999999999887654
Q ss_pred ---CeEEEechHHHHHHhc----C---------------CCcccCCcee----------cCCCceEEEeecCCCChhhHH
Q 014242 317 ---VKIYANASRRRVLQSF----D---------------WPELSGNLCT----------QGNDTLLHVLPMSSLKFETLK 364 (428)
Q Consensus 317 ---~~I~v~~~~~~i~~~~----~---------------~~~~~~~~~~----------d~~~~~I~v~~~~~l~~g~~~ 364 (428)
+||+++++..++.+.+ + .|+....+.. +..+++|++++++||++|++.
T Consensus 437 ~~~~~V~~dg~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~~~vIiat~gm~~gg~~~ 516 (636)
T 2ycb_A 437 IDEVPVYIDGMIWEANAIHTARPEYLSKDLRDQIFHMGHNPFISDIFHKVNGMDERREIVEGEPSIILSTSGMLTGGNSL 516 (636)
T ss_dssp SCCCCEEEEHHHHHHHHHHHHSGGGSCHHHHHHHHTTCCCGGGCTTEEEECCHHHHHHHHHSSSCEEEESCSSSSSHHHH
T ss_pred CCCCeEEEehHHHHHHHHHHHhHHhhCHHHHHHHHhccCCcccCCceEEeCCHHHHHHhccCCCEEEEecCCccCCChHH
Confidence 5999999765543322 1 1221122221 126899999999999999999
Q ss_pred HHHhhhcCCCCcEEEEeeccccccCCCCCcccc----cCC--------CcCCCEEEEEEc-cccCCCHHHHHHHHh
Q 014242 365 DYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDL----IRP--------LSRGNITIYGVP-YSEHSSFTELREFVQ 427 (428)
Q Consensus 365 ~~~~~~~~~~~~~i~~~ptG~~~~~t~g~~l~~----~~~--------~~~~~~~i~~i~-~S~Hs~~~eL~~fv~ 427 (428)
.|+++++.+++|.|+| +||+.++|.|++|.. ++. ..+.++.++.++ ||+|||++||++|++
T Consensus 517 ~~l~~~~~~~~~~vi~--sg~~~~Gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~~~SgHad~~eL~~~i~ 590 (636)
T 2ycb_A 517 EYFKWLCEDPDNSLVF--VGYQAEGSLGRRIQKGWKEIPLKDEDDKMRVYNVRMNIKTIEGFSGHSDRRQLMEYVK 590 (636)
T ss_dssp HHHHHHTTCTTSEEEE--CSCCCSSSHHHHHHTTCCEEEEECSSSCEEEEECCSEEEECCSCCSSCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEE--ecCCCCCCHHHHhhcCCceeeeeccCCceeEEEeEEEEEEECCcceeCCHHHHHHHHH
Confidence 9999999999999999 999999998887542 110 111355678898 999999999999986
No 8
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=100.00 E-value=2.2e-32 Score=289.61 Aligned_cols=305 Identities=16% Similarity=0.164 Sum_probs=214.6
Q ss_pred cCCceEEEcCCCCCC---CCCcceEecCCCc--CCCCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHhh
Q 014242 111 HLKKIVDRSCPFYKK---IPGTPFTVDAFRY--GSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCL 183 (428)
Q Consensus 111 ~~~~~~liDcG~~~~---~~~~~~~iD~f~~--~~i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~ 183 (428)
.++..+++|||.... ..+.+..++.+.. ....+|++|||||+|.||+||++.+. .+.+||+++.+.+++...+
T Consensus 29 ~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l~~~~~~pIy~t~~t~~ll~~~l 108 (555)
T 3zq4_A 29 FQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKL 108 (555)
T ss_dssp ETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHHHTTCCCCEEECHHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHHHHhcCceEEECHHHHHHHHHHH
Confidence 577899999998421 2233334433322 23478999999999999999999754 4789999999998877654
Q ss_pred cc----CCCceEEcCCCcEEEECCEEEEEEEccc-CCCceEEEEEeeCCcEEEEeCCCCCCcccccc----cc---ccCC
Q 014242 184 LV----NPSYIHPLELNTEHVIDGVKVTLLEANH-CPGAALIHFRLQDGQCYLHTGDFRASRLMQSY----PL---LVNH 251 (428)
Q Consensus 184 ~~----~~~~i~~v~~~~~~~i~~~~V~~~~a~H-~~Gs~~~~~~~~~g~~ilytGD~~~~~~~~~~----~~---l~~~ 251 (428)
.. ....++.+++++++.+++++|++++++| ++|++++.++.+ +.+++||||+.+....... .. +...
T Consensus 109 ~~~~~~~~~~~~~v~~g~~~~ig~~~v~~~~~~H~~pgs~~~~i~~~-~~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~ 187 (555)
T 3zq4_A 109 EEHGLLRQTKLNIIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTP-PGNIVHTGDFKFDFTPVGEPANLTKMAEIGKE 187 (555)
T ss_dssp HHHSTTTTCCEEECCTTCCEEETTEEEEEEEEBCSSSSEEEEEEEET-TEEEEECCSCBCCSSCSSSCCCHHHHHHHHHT
T ss_pred HHcCccCCCceEEeCCCCEEEECCEEEEEEeCCCCCcCcEEEEEEEC-CcEEEEeCCCCCCCCcCcCccCHHHHHHhccc
Confidence 31 2346889999999999999999999988 999999999985 4599999999987653211 11 1136
Q ss_pred CccEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHHHh-CCCeEEEEcccc--ccHHHHHHHHHHHcCCeEEEechH---
Q 014242 252 RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK-QPKTLVVVGAYS--IGKESVFLAISKALGVKIYANASR--- 325 (428)
Q Consensus 252 ~~D~Li~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~~-g~~~lvli~~~s--lGreqell~i~~~~~~~I~v~~~~--- 325 (428)
++|+||+||||+.+....++.++..+ .+.+++++ ++ .|++|+|+ +||.|+++.+++++++||++++..
T Consensus 188 ~~d~Li~esT~~~~~~~~~se~~v~~----~i~~~~~~~~g--rvii~~fasnv~R~q~il~~a~~~gr~v~v~grs~~~ 261 (555)
T 3zq4_A 188 GVLCLLSDSTNSENPEFTMSERRVGE----SIHDIFRKVDG--RIIFATFASNIHRLQQVIEAAVQNGRKVAVFGRSMES 261 (555)
T ss_dssp CEEEEEEECTTTTCCSCCCCHHHHHH----HHHHHHHHCCS--CEEEECCTTCHHHHHHHHHHHHTTTCEEEEESHHHHH
T ss_pred CCcEEEecCcccCCCCCCCCHHHHHH----HHHHHHHhCCC--EEEEEEChhHHHHHHHHHHHHHHHCCEEEEeCHHHHH
Confidence 89999999999987665566554444 44455554 44 49999999 999999999999999999999842
Q ss_pred -HHHHHhcCCCcccC-Cce------ecCCCceEEEeecCCCChhhHHHHHhhhcCCCCc--------EEEEeeccccccC
Q 014242 326 -RRVLQSFDWPELSG-NLC------TQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAA--------VLAFRPTGWTYSE 389 (428)
Q Consensus 326 -~~i~~~~~~~~~~~-~~~------~d~~~~~I~v~~~~~l~~g~~~~~~~~~~~~~~~--------~i~~~ptG~~~~~ 389 (428)
.++++.+++-...+ .+. .-+.++.|++++++ ++++ ..++++++.+..+ .|+| +||+.++
T Consensus 262 ~~~~~~~~g~l~~p~~~~v~~~~~~~~~~~~~vii~tgs--qGe~-~~~L~r~a~~~~~~~~~~~~d~vi~--s~~~ipG 336 (555)
T 3zq4_A 262 AIEIGQTLGYINCPKNTFIEHNEINRMPANKVTILCTGS--QGEP-MAALSRIANGTHRQISINPGDTVVF--SSSPIPG 336 (555)
T ss_dssp HHHHHHGGGSCCCCGGGEECGGGTTTSCGGGEEEEECCT--TCCT-TSHHHHHHSSCCSSCCCCTTCEEEE--CSCCCTT
T ss_pred HHHHHHHcCCccCCcccEeCHHHHhhCCCCCEEEEeCCC--CchH-HHHHHHHhcCCCCccccCCCCEEEE--ECCCCCC
Confidence 34455554311111 111 11345667777765 3433 5567777776655 9999 9999988
Q ss_pred CCCCcccccCCCcCCCEEEE-----EEccccCCCHHHHHHHHh
Q 014242 390 TVGNQLDLIRPLSRGNITIY-----GVPYSEHSSFTELREFVQ 427 (428)
Q Consensus 390 t~g~~l~~~~~~~~~~~~i~-----~i~~S~Hs~~~eL~~fv~ 427 (428)
+.+.....++...+-.+++. .+.+|+||+++||+.|++
T Consensus 337 ne~~~~~~~~~l~~~g~~v~~~~~~~~h~SgHa~~~eL~~~~~ 379 (555)
T 3zq4_A 337 NTISVSRTINQLYRAGAEVIHGPLNDIHTSGHGGQEEQKLMLR 379 (555)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSSSSCCCCCSSCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCEEEecCCcceEEeCCCCHHHHHHHHH
Confidence 76421100111112223443 479999999999999986
No 9
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.97 E-value=7.9e-31 Score=278.43 Aligned_cols=306 Identities=19% Similarity=0.202 Sum_probs=207.1
Q ss_pred cCCceEEEcCCCCCC---CCCcceEecCCCc--CCCCCccEEEeCCCchhhhCCccccc--C-----CCcEEeCHHHHHH
Q 014242 111 HLKKIVDRSCPFYKK---IPGTPFTVDAFRY--GSIKGCSAYFLTHFHYDHYGGLGKRW--S-----HGPIYCSPLTARL 178 (428)
Q Consensus 111 ~~~~~~liDcG~~~~---~~~~~~~iD~f~~--~~i~~id~v~iTH~H~DHiggL~~~~--~-----~~~Iy~s~~t~~~ 178 (428)
.++..+++|||.... +.+....++.+.. ....+|++|||||.|.||++|++.+. . +.+||+++.+.++
T Consensus 37 ~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~~~~~~~~pIy~~~~t~~~ 116 (562)
T 3bk2_A 37 FRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMIFGKESPVPIYGARLTLGL 116 (562)
T ss_dssp ETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHHHHHHHHCSCCCSEEEEEHHHHHH
T ss_pred ECCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCHHHHHHhhccccCCceEEeCHHHHHH
Confidence 467899999997422 2233333333321 23468999999999999999999643 1 7899999999988
Q ss_pred HHHhhc---cC--CCceEEcCCCcEEEECC-EEEEEEEccc-CCCceEEEEEeeCCcEEEEeCCCCCCccccc---c--c
Q 014242 179 VRMCLL---VN--PSYIHPLELNTEHVIDG-VKVTLLEANH-CPGAALIHFRLQDGQCYLHTGDFRASRLMQS---Y--P 246 (428)
Q Consensus 179 l~~~~~---~~--~~~i~~v~~~~~~~i~~-~~V~~~~a~H-~~Gs~~~~~~~~~g~~ilytGD~~~~~~~~~---~--~ 246 (428)
+...+. .. ...++++++++++.+++ ++|++++++| ++|+++|.++.+ +.+++||||+.+...... . .
T Consensus 117 l~~~l~~~~~~~~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~gs~~~~i~~~-~~~il~tGD~~~~~~~~~g~~~d~~ 195 (562)
T 3bk2_A 117 LRGKLEEFGLRPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTP-IGTIVHTGDFKLDPTPIDGKVSHLA 195 (562)
T ss_dssp HHHHHHHTTCCSTTSEEEEECTTCEEEETTTEEEEEEECCCSSSSCEEEEEEET-TEEEEECCSCCCCSSCTTSCCCCCH
T ss_pred HHHHHHHcCCCcCCceEEEECCCCEEEeCCCEEEEEEECCCCCcccEEEEEEEC-CeEEEEcCCCCCCCCCCCCCcccHH
Confidence 766543 21 34678899999999998 9999999999 899999999984 458999999987654321 0 0
Q ss_pred ccc---CCCccEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEcccc--ccHHHHHHHHHHHcCCeEEE
Q 014242 247 LLV---NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYS--IGKESVFLAISKALGVKIYA 321 (428)
Q Consensus 247 ~l~---~~~~D~Li~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~~g~~~lvli~~~s--lGreqell~i~~~~~~~I~v 321 (428)
.+. ..++|+||+|+||+....+.++.....+.+.+.+++ .++ .|++++|+ ++|.|+++++++++++||++
T Consensus 196 ~l~~~~~~~~d~Li~EsT~~~~~g~~~~e~~v~~~l~~~~~~---~~g--rvii~~fas~~~r~q~il~~a~~~~r~V~v 270 (562)
T 3bk2_A 196 KVAQAGAEGVLLLIADATNAERPGYTPSEMEIAKELDRVIGR---APG--RVFVTTFASHIHRIQSVIWAAEKYGRKVAM 270 (562)
T ss_dssp HHHHHHHHCCSEEEEECTTTTCCSCCCCHHHHHHHHHHHHHH---CSS--CEEEECCTTCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhccCCCEEEecccCCCCCCCCChHHHHHHHHHHHHHh---CCC--EEEEEEccccchHHHHHHHHHHHhCCEEEE
Confidence 110 157999999999997554455554444444444432 233 48899999 89999999999999999998
Q ss_pred ech-H---HHHHHhcCCCcccCCc-e-----ecCCCceEEEeecCCCChhhHHHHHhhhc--------CCCCcEEEEeec
Q 014242 322 NAS-R---RRVLQSFDWPELSGNL-C-----TQGNDTLLHVLPMSSLKFETLKDYLKPYG--------NQYAAVLAFRPT 383 (428)
Q Consensus 322 ~~~-~---~~i~~~~~~~~~~~~~-~-----~d~~~~~I~v~~~~~l~~g~~~~~~~~~~--------~~~~~~i~~~pt 383 (428)
.+. . .++++.+++-.....+ . ..+.++.|++++.++ +++... +.+++ .++++.|+| +
T Consensus 271 ~g~s~~~~~~~~~~~g~l~~~~~~i~~~~~~~~~~~~~vi~~tg~~--ge~~~~-l~ria~~~h~~~~~~~~~~vi~--s 345 (562)
T 3bk2_A 271 EGRSMLKFSRIALELGYLKVKDRLYTLEEVKDLPDHQVLILATGSQ--GQPMSV-LHRLAFEGHAKMAIKPGDTVIL--S 345 (562)
T ss_dssp ECHHHHHHHHHHHHTTSCCCSSCCBCTGGGTTSCGGGEEEEECCTT--SCSHHH-HHHHHTTCCSSCCCCTTCEEEE--C
T ss_pred EChHHHHHHHHHHhcCcccCCCCccCHHHHhcCCCCCEEEEEcCCC--chhHHH-HHhhhhcccccccCCCCCEEEE--E
Confidence 653 2 3444555432111111 1 113345566676543 444433 44443 377899999 9
Q ss_pred cccccCCCCCcccccCCCcCCCEEE-----EEEccccCCCHHHHHHHHh
Q 014242 384 GWTYSETVGNQLDLIRPLSRGNITI-----YGVPYSEHSSFTELREFVQ 427 (428)
Q Consensus 384 G~~~~~t~g~~l~~~~~~~~~~~~i-----~~i~~S~Hs~~~eL~~fv~ 427 (428)
||+.+++.+.....++...+.++.+ ..+.+|+|||++||++|++
T Consensus 346 ~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~ 394 (562)
T 3bk2_A 346 SSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILN 394 (562)
T ss_dssp SCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHH
T ss_pred CCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHH
Confidence 9999998653211111111123333 2468999999999999985
No 10
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.97 E-value=5.1e-31 Score=286.22 Aligned_cols=275 Identities=13% Similarity=0.112 Sum_probs=202.0
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc--------CCCcEEeCHHHHHHHHHh
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--------SHGPIYCSPLTARLVRMC 182 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~--------~~~~Iy~s~~t~~~l~~~ 182 (428)
.++..+|+|||........+..+..+. ....+|++|||||+|.||+|||+.+. ..++||+++.+..++...
T Consensus 22 ~~~~~ILID~G~~~~~~~~~~~l~~L~-~~~~~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t~~t~~l~~~~ 100 (717)
T 2i7x_A 22 FDNVTLLIDPGWNPSKVSYEQCIKYWE-KVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPVINLGRVS 100 (717)
T ss_dssp ETTEEEEECCCCCTTTSCHHHHHHHHH-TTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCcccchhhhHHHHHH-hcCCCCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEecchhHHHHHHH
Confidence 577899999998652100010001111 11247999999999999999999643 368999999998765543
Q ss_pred hc-------cC-C---------------CceEEcCCCcEEEE----CCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCC
Q 014242 183 LL-------VN-P---------------SYIHPLELNTEHVI----DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235 (428)
Q Consensus 183 ~~-------~~-~---------------~~i~~v~~~~~~~i----~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD 235 (428)
+. .. + ..++++.+++++.+ ++++|+++++||++|+++|.++. ++.+|+||||
T Consensus 101 l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs~Gs~~~~I~~-~~~~IvytGD 179 (717)
T 2i7x_A 101 TIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCPGGSIWCIST-YSEKLVYAKR 179 (717)
T ss_dssp HHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSSTTCEEEEEEC-SSCEEEECSS
T ss_pred HHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCCCCcEEEEEEe-CCCEEEEECC
Confidence 21 00 0 14678999999999 89999999999999999999998 4569999999
Q ss_pred CCCCcccccccc----------ccCCCccEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEccccccHH
Q 014242 236 FRASRLMQSYPL----------LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKE 305 (428)
Q Consensus 236 ~~~~~~~~~~~~----------l~~~~~D~Li~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~~g~~~lvli~~~slGre 305 (428)
++........+. ....++|+||+||||+.+. +|+++ ..+++.+.+.++++.+++ |+||+|+.||.
T Consensus 180 ~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy~~~~--h~~~~-~~~~l~~~i~~~l~~~G~--VlIp~fa~gR~ 254 (717)
T 2i7x_A 180 WNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSS--QPFKK-RSKIFKDTLKKGLSSDGS--VIIPVDMSGKF 254 (717)
T ss_dssp CCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCCS--SCHHH-HHHHHHHHHHHHTSTTCE--EEEEECTTTHH
T ss_pred CCCCcccccCccccccccchhHHhccCCcEEEEcCCCCCCC--CCCHH-HHHHHHHHHHHHHhCCCe--EEEEeccchHH
Confidence 988655332110 1135899999999998864 46654 566888889888877765 99999999999
Q ss_pred HHHHHHHHHc-----------CCeEEEechH----HHHHHhc-CC----------------Ccc-cCCce---e----cC
Q 014242 306 SVFLAISKAL-----------GVKIYANASR----RRVLQSF-DW----------------PEL-SGNLC---T----QG 345 (428)
Q Consensus 306 qell~i~~~~-----------~~~I~v~~~~----~~i~~~~-~~----------------~~~-~~~~~---~----d~ 345 (428)
|+++.++.++ ++|||+++.. .++++.+ +| |+. ++++. . +.
T Consensus 255 qell~~l~~~~~~~~~~~~~~~~pI~l~g~~a~~~~~i~~~~~e~l~~~~~~~~~~~~~~~pf~~~~~l~~~~~~~l~~~ 334 (717)
T 2i7x_A 255 LDLFTQVHELLFESTKINAHTQVPVLILSYARGRTLTYAKSMLEWLSPSLLKTWENRNNTSPFEIGSRIKIIAPNELSKY 334 (717)
T ss_dssp HHHHHHHHHHHTTC-------CCCEEEECTTTTHHHHHHHTCGGGSCHHHHHHHHSSSSCCTTCCTTTEEECCGGGGGGC
T ss_pred HHHHHHHHHhhhhhhccccCCCceEEEECHHHHHHHHHHHHHHHHhChHHHHHHhcccccCCccccccCccCCHHHHhhC
Confidence 9999887543 4799999864 3444443 21 443 23221 1 12
Q ss_pred CCceEEEeecCCCChhhHHHHHhhhcCCCCcEEEEeeccccc-cCCCCCcccc
Q 014242 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-SETVGNQLDL 397 (428)
Q Consensus 346 ~~~~I~v~~~~~l~~g~~~~~~~~~~~~~~~~i~~~ptG~~~-~~t~g~~l~~ 397 (428)
..|+|++++. ++|++.+++++++.+++|.|+| +||+. ++|+|++|..
T Consensus 335 ~~p~VI~aSG---~gG~~~~~L~~~a~~~~n~VIf--~g~~~p~gTlgr~l~~ 382 (717)
T 2i7x_A 335 PGSKICFVSE---VGALINEVIIKVGNSEKTTLIL--TKPSFECASSLDKILE 382 (717)
T ss_dssp CSCEEEEEES---CHHHHHHHHHHHSSCTTEEEEE--CSSCCTTCHHHHHHHH
T ss_pred CCCEEEEECC---CCHHHHHHHHHHcCCCcCEEEE--EcCCCCCCChHHHHHh
Confidence 4577777755 7899999999999999999999 99999 6999998864
No 11
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.95 E-value=1.4e-26 Score=237.66 Aligned_cols=264 Identities=14% Similarity=0.101 Sum_probs=174.6
Q ss_pred CCCCccEEEeCCCchhhhCCcccccCCCcEEeCHHHHHHHHHhhcc-------------CCCceEEcCCCcEEEECCEEE
Q 014242 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV-------------NPSYIHPLELNTEHVIDGVKV 206 (428)
Q Consensus 140 ~i~~id~v~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~~-------------~~~~i~~v~~~~~~~i~~~~V 206 (428)
...+|++|||||.|.||++|++.+..+.+||+++.+..++...... ....++.+++++++.+++++|
T Consensus 81 ~~~~i~~v~lTH~H~DHiggl~~l~~~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v 160 (429)
T 2az4_A 81 KDYQHTAVFLSHAHLDHSRMINYLDPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISV 160 (429)
T ss_dssp CCCSEEEEECSCSCHHHHTTGGGBCTTSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEETTEEE
T ss_pred ccccCCEEEECCchHHHhCcHhHhcCCCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEECCEEE
Confidence 4468999999999999999999887788999999999887654321 124577889999999999999
Q ss_pred EEEEccc-CCCceEEEEEeeCCcEEEEeCCCCCCcccc-----ccccccCCCccEEEEecCCCCCC--------CCCCCh
Q 014242 207 TLLEANH-CPGAALIHFRLQDGQCYLHTGDFRASRLMQ-----SYPLLVNHRVNVLYLDTTYCNPK--------YKFPSK 272 (428)
Q Consensus 207 ~~~~a~H-~~Gs~~~~~~~~~g~~ilytGD~~~~~~~~-----~~~~l~~~~~D~Li~E~Ty~~~~--------~~~ps~ 272 (428)
++++++| ++|+++|.++. .+.+++||||+.+..... .... ..++|+||+||||.... ..+++.
T Consensus 161 ~~~~~~H~~~gs~~~~i~~-~~~~i~~tGD~~~~~~~~~~~~~~~~~--~~~~d~Li~Est~~~~~~~~~~~~~~~~~s~ 237 (429)
T 2az4_A 161 EIVPVDHDAYGASALLIRT-PDHFITYTGDLRLHGHNREETLAFCEK--AKHTELLMMEGVSISFPEREPDPAQIAVVSE 237 (429)
T ss_dssp EEEECCCSSTTCEEEEEEE-TTEEEEECCSCCSSSTTHHHHHHHHHH--HTTCSEEEEECCGGGSCCCCCCTTBCCCCSH
T ss_pred EEEECCCCChhhEEEEEEe-CCcEEEECCCcccCCCchHHHHHHHHh--ccCCCEEEECCCCcCcccccccccCCCCCCH
Confidence 9999999 89999999998 456899999998765321 1111 25899999999998721 114454
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEccccccHHHHHHHHHHHcCCeEEEechHHH-HHHhcC-------CCcc-c-----
Q 014242 273 EDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRR-VLQSFD-------WPEL-S----- 338 (428)
Q Consensus 273 ~~~~~~l~~~i~~~l~~g~~~lvli~~~slGreqell~i~~~~~~~I~v~~~~~~-i~~~~~-------~~~~-~----- 338 (428)
++..+.+ .+.++++++ .+++++++.+..+.+.+++++.|+||++++..+. +.+.+. .+.. .
T Consensus 238 ~~~~~~i----~~~~~~~~~-rlil~h~~~~~~~r~~~~a~~~gr~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (429)
T 2az4_A 238 EDLVQHL----VRLELENPN-RQITFNGYPANVERFAKIIEKSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNP 312 (429)
T ss_dssp HHHHHHH----HHHHHTCSS-SCEEEEECTTCHHHHHHHHHHCSSEEEEEHHHHHHHHHHHCCCCEEECSSSSCCTTSCG
T ss_pred HHHHHHH----HHHHHhCCC-cEEEEEeccchHHHHHHHHHHhCCEEEEEChhHHHHHhhccccCeeEecccccccccCc
Confidence 4444444 444444433 2555555533344444558899999999997653 333221 1110 0
Q ss_pred C-Ccee----cCCCceEEEeecCCCChhhHHHHHhhhcCCCCcEEEEeeccccccCCCC---CcccccCCCcCCCEEEEE
Q 014242 339 G-NLCT----QGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG---NQLDLIRPLSRGNITIYG 410 (428)
Q Consensus 339 ~-~~~~----d~~~~~I~v~~~~~l~~g~~~~~~~~~~~~~~~~i~~~ptG~~~~~t~g---~~l~~~~~~~~~~~~i~~ 410 (428)
. .++. +.....|+ +. .++ ..++. +.+.++| ++|+.+++.. .++.. ...+.+++++.
T Consensus 313 ~~~~~~~~~~~~~~~~ii-~~-----~~~----~~~l~--~~~~vi~--s~~~~~g~~~~~~~~~~~--~~~~~~~~v~~ 376 (429)
T 2az4_A 313 ALEIPYDTLLKDKTDYLW-QV-----VNQ----FDNLQ--EGSLYIH--SDAQPLGDFDPQYRVFLD--LLAKKDITFVR 376 (429)
T ss_dssp GGBCCHHHHHHCSSSEEE-EC-----CSC----GGGSC--TTCEEEE--ESCSSCSTTSHHHHHHHH--HHHHTTCEEEE
T ss_pred cceecHHHHhhCCCcEEE-Ee-----cCc----HHhhC--CCCEEEE--eCCCCCcccchHHHHHHH--HHHhCCCEEEE
Confidence 0 1111 12333444 42 222 12343 2477888 8888776642 12211 11234567788
Q ss_pred EccccCCCHHHHHHHHh
Q 014242 411 VPYSEHSSFTELREFVQ 427 (428)
Q Consensus 411 i~~S~Hs~~~eL~~fv~ 427 (428)
+++|+|||++||++|++
T Consensus 377 i~~SgHa~~~eL~~~~~ 393 (429)
T 2az4_A 377 LACSGHAIPEDLDKIIA 393 (429)
T ss_dssp CCCCSSCCHHHHHHHHH
T ss_pred EeecCCCCHHHHHHHHH
Confidence 99999999999999986
No 12
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.81 E-value=4.3e-20 Score=177.19 Aligned_cols=196 Identities=11% Similarity=0.087 Sum_probs=130.3
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc-------------CCCcEEeCHHHHH
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-------------SHGPIYCSPLTAR 177 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~-------------~~~~Iy~s~~t~~ 177 (428)
.++..+++|||..... .+... ....+|++|||||.|.||++|++.+. ...+||+++.+.+
T Consensus 50 ~~~~~iLiD~G~~~~~-----~l~~~--~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 122 (268)
T 1zkp_A 50 HDGFRLLVDCGSGVLA-----QLQKY--ITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDEN 122 (268)
T ss_dssp ETTEEEEECCCTTHHH-----HHTTT--CCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHH
T ss_pred ECCcEEEEECCHHHHH-----HHHHh--CCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEEeCccHHH
Confidence 4677899999975310 01110 12367999999999999999998421 2578999998887
Q ss_pred HHHHhhccCCCceEEcCCCcEEEECCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCccccccccccCCCccEEE
Q 014242 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLY 257 (428)
Q Consensus 178 ~l~~~~~~~~~~i~~v~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~D~Li 257 (428)
.+....-.....+..++.++++.+++++|+++++.|.+|+++|+++. ++++++|+||+.+.+... .. ..++|+||
T Consensus 123 ~l~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~~H~~~~~~~~i~~-~~~~i~~~GD~~~~~~~~--~~--~~~~d~li 197 (268)
T 1zkp_A 123 GFHSLTHEPHTKGIPYNPEETLQIGPFSISFLKTVHPVTCFAMRITA-GNDIVVYSADSSYIPEFI--PF--TKDADLFI 197 (268)
T ss_dssp HHHTTCBTTTEEEEECCTTSCEEETTEEEEEEECCSSSCCEEEEEEE-TTEEEEECCSCCCCTTHH--HH--HTTCSEEE
T ss_pred HHHhcccCCccceEEecCCCeEEECCEEEEEEECCCCCCceEEEEEE-CCeEEEEeCCCCCCHHHH--HH--HcCCCEEE
Confidence 66543211123467788899999999999999999999999999997 567999999999876543 22 26899999
Q ss_pred EecCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEccccc--cHHHHHHHHHHHcCCeEEEe
Q 014242 258 LDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI--GKESVFLAISKALGVKIYAN 322 (428)
Q Consensus 258 ~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~~g~~~lvli~~~sl--Greqell~i~~~~~~~I~v~ 322 (428)
+|+||.......+..+...++..+.+++ .+++. +++.+|+. .+++.+.++.+.++.+|.+.
T Consensus 198 ~e~~~~~~~~~~~~~H~~~~~a~~~~~~---~~~~~-lil~H~~~~~~~~~~~~~~~~~~~~~v~~a 260 (268)
T 1zkp_A 198 CECNMYAHQEAAKAGHMNSTEVASIAKD---ANVKE-LLLTHLPHTGNPADLVTEAKQIFSGHITLA 260 (268)
T ss_dssp EECCBCTTSCCGGGTCCBHHHHHHHHHH---TTCSE-EEEESBCSSSCTHHHHHHHHTTCCSEEEEC
T ss_pred EECCCCccccccCCCCCCHHHHHHHHHH---cCCCE-EEEECCCCCCChHHHHHHHHHhCCCCEEEE
Confidence 9999976432111112223334444432 24453 44444543 34444445555566666664
No 13
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.80 E-value=4.3e-19 Score=178.19 Aligned_cols=200 Identities=19% Similarity=0.174 Sum_probs=129.9
Q ss_pred cCCCCchhcccc--ccccccceeeeeccccCCccccccCCCCCceeeeccCCCCccccCCce----EEEcCCCCCCCC--
Q 014242 56 CGTDWSCLLQTE--RKLKQANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTATHLKKI----VDRSCPFYKKIP-- 127 (428)
Q Consensus 56 ~~~~w~~~~~~~--~~~~~~~~~~~w~~~~~~~~~~~~g~~~~~~~l~~g~~~~~~~~~~~~----~liDcG~~~~~~-- 127 (428)
.-.+||||||+| .+.|+++.+.+||+|+++.++++-|+.+.+.+.|+|.+...+..+.+. ++...|.....+
T Consensus 16 ~~~~~~~~l~~~~~~~~~~~~~~~it~lG~s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~ 95 (360)
T 2wyl_A 16 TFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNL 95 (360)
T ss_dssp TCSTTTTHHHHHHHHCCCCTTCEEEEEEETTEEEEECTTCCEEEESCCCCCCCCCCCC----------------CCCCCC
T ss_pred cCCchhhhhhhhcccccCCCCcEEEEEecccEEEEEeCCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCc
Confidence 346899999999 677999999999999988776643334444444444432111000000 001112111111
Q ss_pred -CcceEecCCCcCCCCCccEEEeCCCchhhhC--Ccccc---c-CCCcEEeCHHHHHHHHHhhccCCCceEEcCCCcEEE
Q 014242 128 -GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYG--GLGKR---W-SHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHV 200 (428)
Q Consensus 128 -~~~~~iD~f~~~~i~~id~v~iTH~H~DHig--gL~~~---~-~~~~Iy~s~~t~~~l~~~~~~~~~~i~~v~~~~~~~ 200 (428)
..+..+++. .+.+||+|||||.|.||++ ++..+ . ...+||++..+.+.+.. ++.....++.+..++.+.
T Consensus 96 ~~~p~~l~~~---~l~~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~~-~g~~~~~~~~l~~g~~~~ 171 (360)
T 2wyl_A 96 RTTPFVLDPF---AIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIG-WGVPKERCIVVKPGDVVK 171 (360)
T ss_dssp BCSCCCCCGG---GCCCCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHHH-HTCCGGGEEECCTTCEEE
T ss_pred ccCCCccCHH---HcCCCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHHH-cCCChheEEEcCCCCEEE
Confidence 112223322 3468999999999999996 23322 1 26899999998877654 344334688899999999
Q ss_pred ECCEEEEEEEcccC------------C---------CceEEEEEeeCCcEEEEeCCCCCCccccccccccCCCccEEEEe
Q 014242 201 IDGVKVTLLEANHC------------P---------GAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLD 259 (428)
Q Consensus 201 i~~~~V~~~~a~H~------------~---------Gs~~~~~~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~D~Li~E 259 (428)
+++++|+++++.|. + .+++|+++. +|++++|+||+.+.+.+.... ...++|++++.
T Consensus 172 ~g~~~v~~~~~~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~-~g~~i~~sGDt~~~~~~~~i~--~~~~~Dv~il~ 248 (360)
T 2wyl_A 172 VKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKT-PGGSLYHSGDSHYSNYYAKHG--NEHQIDVALGS 248 (360)
T ss_dssp ETTEEEEEEECCCC------------------CCTTTBEEEEEEE-TTEEEEECTTCCCCTTHHHHH--HHSCCCEEEEE
T ss_pred ECCEEEEEEeccCcccccccccccccccccccccCcccEEEEEEE-CCcEEEEeCCCCcCHHHHHHh--hCCCCCEEEec
Confidence 99999999999774 2 378999997 567999999999876643211 12478999997
Q ss_pred cCC
Q 014242 260 TTY 262 (428)
Q Consensus 260 ~Ty 262 (428)
...
T Consensus 249 ~g~ 251 (360)
T 2wyl_A 249 YGE 251 (360)
T ss_dssp BCC
T ss_pred CCC
Confidence 653
No 14
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.77 E-value=1.1e-18 Score=176.60 Aligned_cols=198 Identities=19% Similarity=0.164 Sum_probs=128.4
Q ss_pred CCCchhcccc--ccccccceeeeeccccCCccccccCCCCCceeeeccCCCCccccCCce----EEEcCCCCCCCC---C
Q 014242 58 TDWSCLLQTE--RKLKQANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTATHLKKI----VDRSCPFYKKIP---G 128 (428)
Q Consensus 58 ~~w~~~~~~~--~~~~~~~~~~~w~~~~~~~~~~~~g~~~~~~~l~~g~~~~~~~~~~~~----~liDcG~~~~~~---~ 128 (428)
.+||+|||+| .+.++++.+.+||+|+++.++++-|+.+.+.+.|+|.+......+... .+...|.....+ .
T Consensus 42 p~~~~~l~~~~~~~~~~~~~~~it~lG~s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~ 121 (379)
T 3bv6_A 42 PEWGTWLNEEIEQTVVEPNTFSMWWLGCTGIWLKSAGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRT 121 (379)
T ss_dssp STTTTHHHHHHHTCCCCTTCEEEEEEETTEEEEEETTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBC
T ss_pred CCccccchhhcccccCCCCceEEEEecccEEEEEeCCCCEEEEccCCCCCccccccccccccchhheecCccccCccccC
Confidence 5799999998 678999999999999988776643333344444443321110000000 000001111111 1
Q ss_pred cceEecCCCcCCCCCccEEEeCCCchhhhC--Ccccc---c-CCCcEEeCHHHHHHHHHhhccCCCceEEcCCCcEEEEC
Q 014242 129 TPFTVDAFRYGSIKGCSAYFLTHFHYDHYG--GLGKR---W-SHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID 202 (428)
Q Consensus 129 ~~~~iD~f~~~~i~~id~v~iTH~H~DHig--gL~~~---~-~~~~Iy~s~~t~~~l~~~~~~~~~~i~~v~~~~~~~i~ 202 (428)
.+..+++. .+.+||+|||||.|.||++ ++..+ . ...+||++..+.+.+.. ++.....++.++.++.+.++
T Consensus 122 ~p~~l~~~---~~~~iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~~-~g~~~~~~~~l~~g~~~~~g 197 (379)
T 3bv6_A 122 SIFPLDPF---AIKEIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWLG-WGVPQERCIVAKVGDVLEIG 197 (379)
T ss_dssp SCCCSCGG---GCCCCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHHH-HTCCGGGEEECCTTCEEEET
T ss_pred CCCccChH---HCCCCCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHHH-cCCChhhEEEeCCCCEEEEC
Confidence 11223321 3468999999999999995 33322 1 26899999998877754 34433468889999999999
Q ss_pred CEEEEEEEcccC-------------CC---------ceEEEEEeeCCcEEEEeCCCCCCccccccccccCCCccEEEEec
Q 014242 203 GVKVTLLEANHC-------------PG---------AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDT 260 (428)
Q Consensus 203 ~~~V~~~~a~H~-------------~G---------s~~~~~~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~D~Li~E~ 260 (428)
+++|+++++.|. +| +++|+++. +|++|+|+||+.+.+++.... ...++|++++..
T Consensus 198 ~~~v~~~~~~H~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~-~g~~i~~sGDt~~~~~~~~i~--~~~~~Dv~il~~ 274 (379)
T 3bv6_A 198 DVKIRVLDSFDRTALVTLPKGVSSYDKAILDGMDERAVNYLIET-SGGSVYHSGDSHYSNYYAKHG--NDYQIDVALLSY 274 (379)
T ss_dssp TEEEEEEECCCHHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEE-TTEEEEECTTCCCCTTHHHHH--HHSCCSEEEEEB
T ss_pred CEEEEEEecccccccccccccccccccccccccCCceEEEEEEe-CCeEEEEeCCCCccHHHHHHh--hcCCCCEEEecC
Confidence 999999999883 22 78999987 678999999999876643211 123789999976
Q ss_pred CC
Q 014242 261 TY 262 (428)
Q Consensus 261 Ty 262 (428)
..
T Consensus 275 g~ 276 (379)
T 3bv6_A 275 GE 276 (379)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 15
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.77 E-value=4.4e-19 Score=173.06 Aligned_cols=144 Identities=17% Similarity=0.060 Sum_probs=108.5
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc---------CCCcEEeCHHHHHHHHHh
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW---------SHGPIYCSPLTARLVRMC 182 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~---------~~~~Iy~s~~t~~~l~~~ 182 (428)
++..+++|||..... .+.... ....+|++|||||.|.||++|++.+. ...+||+++.+.+.+...
T Consensus 32 ~~~~iliD~G~~~~~-----~l~~~~-~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~ 105 (306)
T 2cbn_A 32 QSGLWLFDCGEGTQH-----QLLHTA-FNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETA 105 (306)
T ss_dssp CCCEEEECCCTTHHH-----HHHTSC-CCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHH
T ss_pred CCcEEEEECCHHHHH-----HHHHhC-CCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHH
Confidence 667899999985310 011110 12368999999999999999998431 356899999988877654
Q ss_pred hccC------CCceEEcCCCcEEEECCEEEEEEEcccCCCceEEEEEee-------------------------------
Q 014242 183 LLVN------PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ------------------------------- 225 (428)
Q Consensus 183 ~~~~------~~~i~~v~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~------------------------------- 225 (428)
+... ...+++++.++.+.+++++|+++++.|..++++|.++.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~H~~~~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v 185 (306)
T 2cbn_A 106 LRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTI 185 (306)
T ss_dssp HHHTTCCCSSCEEEEECCSEEEEECSSEEEEEEECBSSSCCEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCC
T ss_pred HHhhccCCCceEEEEEcCCCcEeecCCEEEEEEEccCCCCccEEEEEecCccCccCHHHHHHcCCCCchHHHHhcCCCeE
Confidence 3211 125677888999999999999999999999999999841
Q ss_pred ------------------CCcEEEEeCCCCCCccccccccccCCCccEEEEecCCCCC
Q 014242 226 ------------------DGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNP 265 (428)
Q Consensus 226 ------------------~g~~ilytGD~~~~~~~~~~~~l~~~~~D~Li~E~Ty~~~ 265 (428)
+|++|+|+||++..+... .. ..++|+||+||||.+.
T Consensus 186 ~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~~~~~~~--~~--~~~~D~li~E~t~~~~ 239 (306)
T 2cbn_A 186 TLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAAL--DL--AKGVDVMVHEATLDIT 239 (306)
T ss_dssp EETTTEECCGGGTBCCCCCCCEEEECCSCBSCSTHH--HH--HTTCSEEEEECCBCGG
T ss_pred EcCCCcEEcHHHhcCCCCCCCEEEEeCCCCCHHHHH--HH--hcCCCEEEEECcCChh
Confidence 467999999999877532 22 3689999999999864
No 16
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.77 E-value=6.6e-19 Score=173.19 Aligned_cols=144 Identities=19% Similarity=0.197 Sum_probs=108.3
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc---------CCCcEEeCHHHHHHHHHh
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW---------SHGPIYCSPLTARLVRMC 182 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~---------~~~~Iy~s~~t~~~l~~~ 182 (428)
++..+++|||..... .+.... ....+|++|||||.|.||++|++.+. ...+||+++.+.+.+...
T Consensus 30 ~~~~iLiD~G~~~~~-----~l~~~~-~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 103 (320)
T 1y44_A 30 RRSVWLFDCGEATQH-----QMLHTT-IKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETS 103 (320)
T ss_dssp TSEEEEECCCTTHHH-----HHTTSS-CCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHH
T ss_pred CCcEEEEECCHHHHH-----HHHHcC-CCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHH
Confidence 667899999985310 011100 12357999999999999999998531 256899999988877654
Q ss_pred hccC------CCceEEcCCCcEEEECCEEEEEEEcccCCCceEEEEEee-------------------------------
Q 014242 183 LLVN------PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ------------------------------- 225 (428)
Q Consensus 183 ~~~~------~~~i~~v~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~------------------------------- 225 (428)
+... ...++.++.++.+.+++++|++++++|.+++++|.++.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~p~~H~~~~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v 183 (320)
T 1y44_A 104 LAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETV 183 (320)
T ss_dssp HHHTTCCCSSCEEEEECCSEEEEECSSEEEEEEECBSSSSBEEEEEEECCBCCCC-------------------------
T ss_pred HHhhccCCCCceEEEEcCCCceEecCCEEEEEEEccCCCCcceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeE
Confidence 3211 234677888999999999999999999999999999741
Q ss_pred ------------------CCcEEEEeCCCCCCccccccccccCCCccEEEEecCCCCC
Q 014242 226 ------------------DGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNP 265 (428)
Q Consensus 226 ------------------~g~~ilytGD~~~~~~~~~~~~l~~~~~D~Li~E~Ty~~~ 265 (428)
+|++|+|+||++..+... .. ..++|+||+||||.+.
T Consensus 184 ~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~~~~~--~~--~~~~D~li~E~t~~~~ 237 (320)
T 1y44_A 184 TLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSDKLK--EL--ARDCDVMVHEATFAKE 237 (320)
T ss_dssp -------------CCCCBCCCEEEECCSCBCCHHHH--HH--TTTCSEEEEECCBCTT
T ss_pred EcCCCeEEcHHHhcccCCCCCEEEEeCCCCCHHHHH--HH--hCCCCEEEEeccCCcc
Confidence 467999999999877532 22 3689999999999875
No 17
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.76 E-value=1.1e-18 Score=166.86 Aligned_cols=143 Identities=17% Similarity=0.078 Sum_probs=105.2
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCcccccC----CCcEEeCHHHHHHHHHhhccC
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWS----HGPIYCSPLTARLVRMCLLVN 186 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~~----~~~Iy~s~~t~~~l~~~~~~~ 186 (428)
.++..+++|||.... ...++ ..+|++|||||.|.||++|++.+.. ..+||+++.+..+ ...+..+
T Consensus 46 ~~~~~iLiD~G~~~~----~~~~~------~~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~~-~~~~~~~ 114 (258)
T 3g1p_A 46 FNDAITLIDAGLHDL----ADRWS------PGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGC-DDLFKHP 114 (258)
T ss_dssp ETTEEEEECCCCTTH----HHHCC------TTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCS-TTTTTSC
T ss_pred ECCcEEEEECCchHH----HhhcC------cccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhhhH-HHHhcCC
Confidence 577899999994321 11122 2579999999999999999986432 3689999877521 1111111
Q ss_pred C-Cc-eEEcCCCcEEEECCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCccccccccccCCCccEEEEecCCCC
Q 014242 187 P-SY-IHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCN 264 (428)
Q Consensus 187 ~-~~-i~~v~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~D~Li~E~Ty~~ 264 (428)
. .. ..+++.++++.+++++|+++++.|.+++++|+++. ++++++|+||+...++... ..+...++|+||+|+||..
T Consensus 115 ~~~~~~~~~~~g~~~~~g~~~v~~~~~~H~~~~~g~~i~~-~~~~i~~~GDt~~~~~~~~-~~l~~~~~Dlli~e~t~~~ 192 (258)
T 3g1p_A 115 GLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLET-AHSRVAWLSDTAGLPEKTL-KFLRNNQPQVMVMDCSHPP 192 (258)
T ss_dssp TTEEEEEECCTTCCEEETTEEEEEEECCSSSCCEEEEEEC-SSCEEEEECSCSSCCHHHH-HHHHHTCCSEEEEECCBSS
T ss_pred CccccccccCCCCeEEECCEEEEEEECCCCCCceEEEEEe-CCcEEEEECCCCCCCHHHH-HHHHhCCCCEEEEeCCCCC
Confidence 1 12 25788999999999999999999999999999997 6779999999998765321 2222268999999999976
Q ss_pred CC
Q 014242 265 PK 266 (428)
Q Consensus 265 ~~ 266 (428)
..
T Consensus 193 ~~ 194 (258)
T 3g1p_A 193 RA 194 (258)
T ss_dssp CS
T ss_pred cc
Confidence 53
No 18
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.75 E-value=1.8e-18 Score=166.21 Aligned_cols=195 Identities=14% Similarity=0.048 Sum_probs=123.3
Q ss_pred ccccCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCcccc------cC-----CCcEEeCHHHH
Q 014242 108 TATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR------WS-----HGPIYCSPLTA 176 (428)
Q Consensus 108 ~~~~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~------~~-----~~~Iy~s~~t~ 176 (428)
+.+.++..+++|||..... .+.. ...+|++|||||.|.||++|++.+ .. ..+||+++.+.
T Consensus 14 ~~~i~~~~iLiD~G~~~~~---~l~~------~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~~~ 84 (280)
T 2e7y_A 14 WIYYSPERILFDAGEGVST---TLGS------KVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNR 84 (280)
T ss_dssp EEEEGGGTEEEEECTTHHH---HHGG------GGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETTCH
T ss_pred EEEECCcEEEEECCcchHH---Hhcc------CccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECccHH
Confidence 4444567899999974421 1111 236799999999999999999864 11 37899998876
Q ss_pred HHHHHhhc--------c-CCCceEEcCCCcEEEEC-----CEEEEEEEcccCCC--ceEEEEEee---------------
Q 014242 177 RLVRMCLL--------V-NPSYIHPLELNTEHVID-----GVKVTLLEANHCPG--AALIHFRLQ--------------- 225 (428)
Q Consensus 177 ~~l~~~~~--------~-~~~~i~~v~~~~~~~i~-----~~~V~~~~a~H~~G--s~~~~~~~~--------------- 225 (428)
.+...+. . ....++.++.++++.++ +++|++++++|+++ +++|+++..
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~~l~~~~~g~~~~~ 163 (280)
T 2e7y_A 85 -AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFEVRRKLKKEFQGLDSKE 163 (280)
T ss_dssp -HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCSSSCCEEEEEEEEEEEECGGGTTCCHHH
T ss_pred -HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEccCCCCCceEEEEEEEcccccCHhhcCCCHHH
Confidence 5543211 1 11356788999999998 89999999999999 999999731
Q ss_pred -----------------CCcEEEEeCCCCCCccccccccccCCCccEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 014242 226 -----------------DGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLK 288 (428)
Q Consensus 226 -----------------~g~~ilytGD~~~~~~~~~~~~l~~~~~D~Li~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~ 288 (428)
.|++|+|+||++.. . ... ..++|+||+||||..+.......+...+++.+.+++.
T Consensus 164 ~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~--~--~~~--~~~~d~li~e~t~~~~~~~~~~~H~t~~~a~~~~~~~-- 235 (280)
T 2e7y_A 164 ISRLVKEKGRDFVTEEYHKKVLTISGDSLAL--D--PEE--IRGTELLIHECTFLDARDRRYKNHAAIDEVMESVKAA-- 235 (280)
T ss_dssp HHHHHHHHCTGGGEEEEEEEEEEECCSCSSC--C--HHH--HTTCSCEEEECCBC--------CCCBHHHHHHHHHHH--
T ss_pred HHHHHhhcCCceecCCccCCEEEEECCCChH--H--HHh--hcCCCEEEEeCCcCChhhHHhcCCCCHHHHHHHHHHc--
Confidence 34689999999987 2 122 3689999999999865321011122233344444433
Q ss_pred hCCCeEEEEccccccHH---HHHHHHHH-Hc-CCeEEEe
Q 014242 289 KQPKTLVVVGAYSIGKE---SVFLAISK-AL-GVKIYAN 322 (428)
Q Consensus 289 ~g~~~lvli~~~slGre---qell~i~~-~~-~~~I~v~ 322 (428)
+.+. +++.+|+.... +++++-++ .+ +.+|.+.
T Consensus 236 -~~~~-lvl~H~~~~~~~~~~~~~~~~~~~~~~~~v~~a 272 (280)
T 2e7y_A 236 -GVKK-VILYHISTRYIRQLKSVIKKYREEMPDVEILYM 272 (280)
T ss_dssp -TCCE-EEEESCCGGGHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred -CCCE-EEEEeecCcCcchHHHHHHHHHHhCCCceEEEe
Confidence 4443 55556654322 33333333 33 4566653
No 19
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.66 E-value=3.6e-16 Score=152.29 Aligned_cols=165 Identities=15% Similarity=0.115 Sum_probs=115.3
Q ss_pred ceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCcccc-------cCCCcEEeCHHHHHHHHHhhcc-
Q 014242 114 KIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR-------WSHGPIYCSPLTARLVRMCLLV- 185 (428)
Q Consensus 114 ~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~-------~~~~~Iy~s~~t~~~l~~~~~~- 185 (428)
..+|+|||...... + ....+.+|++|||||.|.||++|++.+ ....+||+++.+.+.+...+..
T Consensus 78 ~~iLID~G~~~~~~-----l---~~~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~ 149 (293)
T 3md7_A 78 TVVVIDTGPDFRMQ-----M---IDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYC 149 (293)
T ss_dssp EEEEECCCTTHHHH-----H---HHHTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGG
T ss_pred eEEEEECCccHHHH-----H---HhcCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhh
Confidence 58999999743210 0 001346899999999999999999954 2467999999998887765321
Q ss_pred ---------C-CCceEEcCCCcEEEECC----EEEEEEEcccC-CCceEEEEEeeCCcEEEEeCCCCCCccccccccccC
Q 014242 186 ---------N-PSYIHPLELNTEHVIDG----VKVTLLEANHC-PGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVN 250 (428)
Q Consensus 186 ---------~-~~~i~~v~~~~~~~i~~----~~V~~~~a~H~-~Gs~~~~~~~~~g~~ilytGD~~~~~~~~~~~~l~~ 250 (428)
. ...++.++.++++.+++ ++|+++++.|. .++++|+++ +++|+||+...++.. ... .
T Consensus 150 ~~~~~~~~~~~~~~~~~l~~g~~~~~g~~~~~~~v~~~~~~H~~~~~~g~~i~-----~~~y~gDt~~~~~~~-~~~--~ 221 (293)
T 3md7_A 150 FETPVGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIG-----SVVYCTDVSAFPEQS-LQY--I 221 (293)
T ss_dssp TSCCTTCCCCCCEEEEECCTTCCEEECCTTCCEEEEEEEEEETTEEEEEEEET-----TEEEECSCSBCCGGG-HHH--H
T ss_pred hccccccCCCCceEEEEcCCCCcEEECCCCCcEEEEEEEecCCCCCEEEEEEe-----EEEEECCCCCCCHHH-HHH--h
Confidence 0 12467788899999999 99999999997 589998886 699999998643322 122 2
Q ss_pred CCccEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEccccc
Q 014242 251 HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302 (428)
Q Consensus 251 ~~~D~Li~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~~g~~~lvli~~~sl 302 (428)
.++|+||+|+++..+...|.+.++ .++.+++. +++. +++.+++.
T Consensus 222 ~~~Dlli~e~~~~~~~~~H~~~~~----a~~~~~~~---~~k~-lvl~H~~~ 265 (293)
T 3md7_A 222 KDADVLIIGALQYRPHPSHFSLGE----ALEWIEKL---SPKR-AILTHMHV 265 (293)
T ss_dssp TTCSEEEEECCCSSCBTTBCCHHH----HHHHHHHH---CCSE-EEEESBCT
T ss_pred cCCCEEEEeCccCCCCCCCCCHHH----HHHHHHHc---CCCE-EEEECCCC
Confidence 689999999987665433444433 34444333 4554 44445543
No 20
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.66 E-value=1.5e-16 Score=160.36 Aligned_cols=145 Identities=14% Similarity=0.048 Sum_probs=101.1
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc-------------CCCcEEeCHHHHH
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-------------SHGPIYCSPLTAR 177 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~-------------~~~~Iy~s~~t~~ 177 (428)
.++..+|+|||...........+ ...+|++|||||.|.||++|++.+. ...+||+++.+.+
T Consensus 26 ~~~~~iLiD~G~g~~~~l~~~~~------~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~ 99 (368)
T 3zwf_A 26 CEGECWLFDCGEGTQTQLMKSQL------KAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRD 99 (368)
T ss_dssp ETTEEEEECCCTTHHHHHHHSSS------CGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------CCEEEEEETTHHH
T ss_pred ECCeEEEEeCChhHHHHHHHcCC------ChHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCCCCeEEEEcHHHHH
Confidence 46788999999743110001112 2257999999999999999998521 2578999999988
Q ss_pred HHHHhhccC------CCceEEcCC---------------------------CcE------------EEECCEEEEEEEcc
Q 014242 178 LVRMCLLVN------PSYIHPLEL---------------------------NTE------------HVIDGVKVTLLEAN 212 (428)
Q Consensus 178 ~l~~~~~~~------~~~i~~v~~---------------------------~~~------------~~i~~~~V~~~~a~ 212 (428)
.+...+... +..++++.. ++. ++.++++|+++++.
T Consensus 100 ~l~~~l~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~V~a~~~~ 179 (368)
T 3zwf_A 100 FIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEENSYLLFDDEQFVVKAFRLF 179 (368)
T ss_dssp HHHHHHHHTTCCCSSCEEEEEECCCGGGSCC-------------------CCCEECCBTTTTBEEEEECSSEEEEEEEEE
T ss_pred HHHHHHHhhCcCCCceEEEEEeecCccccccccccccccccccccCcccccccccccccccCceeEEeCCCEEEEEEecc
Confidence 776544321 122333422 322 23378999999999
Q ss_pred cCCCceEEEEEeeC-------------------------------------------------CcEEEEeCCCCC--Ccc
Q 014242 213 HCPGAALIHFRLQD-------------------------------------------------GQCYLHTGDFRA--SRL 241 (428)
Q Consensus 213 H~~Gs~~~~~~~~~-------------------------------------------------g~~ilytGD~~~--~~~ 241 (428)
|...+++|+|+.++ |++|+|+||+.. ...
T Consensus 180 H~vp~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~G~~v~~~dG~~i~~~~v~~~~~~g~~v~~~GDT~~~~~~~ 259 (368)
T 3zwf_A 180 HRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDG 259 (368)
T ss_dssp SSSCEEEEEEEECC------------------------------------------------CCCEEEEECSCSEECSSH
T ss_pred CCCceEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCCCCeEEecCCEEEEhHHhccccccceEEEEEecCCcccchh
Confidence 99899999998631 779999999987 332
Q ss_pred ccccccccCCCccEEEEecCCCCC
Q 014242 242 MQSYPLLVNHRVNVLYLDTTYCNP 265 (428)
Q Consensus 242 ~~~~~~l~~~~~D~Li~E~Ty~~~ 265 (428)
.. .. ..++|+||+|+||...
T Consensus 260 ~~--~~--~~~~Dlli~Eat~~~~ 279 (368)
T 3zwf_A 260 GV--KL--CFEADLLIHEATLDDA 279 (368)
T ss_dssp HH--HH--TTTCSEEEEECCSCGG
T ss_pred HH--HH--hcCCCEEEEecCCChH
Confidence 22 22 4789999999999864
No 21
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.64 E-value=2e-15 Score=142.69 Aligned_cols=172 Identities=14% Similarity=0.069 Sum_probs=118.0
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccc---c-cCCCcEEeCHHHHHHHHHhhccCC
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK---R-WSHGPIYCSPLTARLVRMCLLVNP 187 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~---~-~~~~~Iy~s~~t~~~l~~~~~~~~ 187 (428)
++..+++|||..... + ..+.++|+|||||.|.||+ ++.. + ....+||+++.+.+.+.
T Consensus 45 ~~~~iliDpg~~~~~------~-----~~~~~id~VliTH~H~DH~-~~~~l~~~~~~~~~v~~~~~~~~~l~------- 105 (235)
T 3kl7_A 45 DNHSIQVDPVSEYAD------Y-----TTFPKADIILITHEHGDHL-DPKAIQAVEKSDTEIIANENSQKKLG------- 105 (235)
T ss_dssp TTEEEEESCCTTTCC------T-----TSSCCCSEEEECCSSTTTC-CHHHHHHHCCTTCEEEECHHHHHHHT-------
T ss_pred CCEEEEECCCCCccc------h-----hhCCCCCEEEECCCccccC-CHHHHHHhhcCCCEEEEcHHHHHHhc-------
Confidence 456899999975421 1 1336799999999999999 5442 2 35789999998876652
Q ss_pred CceEEcCCCc-EEEECCEEEEEEEcccCCC----------ceEEEEEeeCCcEEEEeCCCCCCccccccccccCCCccEE
Q 014242 188 SYIHPLELNT-EHVIDGVKVTLLEANHCPG----------AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVL 256 (428)
Q Consensus 188 ~~i~~v~~~~-~~~i~~~~V~~~~a~H~~G----------s~~~~~~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~D~L 256 (428)
....++.++ ++.+++++|+++++.|.++ +++|+++. +|++++|+||+.+.+++.. ..++|++
T Consensus 106 -~~~~l~~g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~-~g~~i~~~GDt~~~~~~~~-----l~~~Dv~ 178 (235)
T 3kl7_A 106 -KGKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTF-DGLRVYIAGDTEDIPEMKD-----LKDIDIA 178 (235)
T ss_dssp -CSEECCTTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEE-TTEEEEECCSCCSCGGGGG-----CCSCSEE
T ss_pred -CcEEecCCCEEEEECCEEEEEEEeecCCCccccccCCCCceEEEEEe-CCeEEEEECCCCchhhHHh-----hcCCCEE
Confidence 357788999 9999999999999998542 58999997 6789999999999876431 2589999
Q ss_pred EEecCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCeEEEEccccccHHHHHHHHHHHcCCeEEE
Q 014242 257 YLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYA 321 (428)
Q Consensus 257 i~E~Ty~~~~~~~ps~~~~~~~l~~~i~~~l~~g~~~lvli~~~slGreqell~i~~~~~~~I~v 321 (428)
++++.. ..+.+.+++.+ .+++. +++.+|++ +|.....+++.+.+++.|+++.+
T Consensus 179 il~~~~----~~h~~~~ea~~----~~~~l---~~k~vip~-H~~~~~~~~~~~~l~~~gi~v~~ 231 (235)
T 3kl7_A 179 FLPVNQ----PYTMTVSQAAK----AARMF---SPKILYPY-HYGDTKIGELKDALKDSGIDVRI 231 (235)
T ss_dssp EEECCT----TTSCCHHHHHH----HHHHH---CCSEEEEE-SCTTCCTTHHHHHTTTSCCEECC
T ss_pred EECCCC----CcccCHHHHHH----HHHHc---CCCEEEEE-cCCCCCHHHHHHHHhhCCCEEEE
Confidence 999862 11234444333 33322 45533333 44443334555555556776654
No 22
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.60 E-value=9.3e-16 Score=151.71 Aligned_cols=150 Identities=15% Similarity=0.111 Sum_probs=105.3
Q ss_pred CCce-EEEcCCCCCCCCCcceE-ecCCCcCCCCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHhh---c
Q 014242 112 LKKI-VDRSCPFYKKIPGTPFT-VDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCL---L 184 (428)
Q Consensus 112 ~~~~-~liDcG~~~~~~~~~~~-iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~---~ 184 (428)
++.. +|+|||........... +.+.......+|++|||||.|.||++|++.+. ...+||+++.+.+.+...+ .
T Consensus 49 ~~~~~iLiD~G~~~~~~l~~~~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~~~~~~vy~~~~~~~~l~~~~~~f~ 128 (321)
T 3jxp_A 49 DGVHWILCNASPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQVWCTDMVHQDLTTGFPLFN 128 (321)
T ss_dssp SSSSEEEECCCTTHHHHHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGGGCCEEEEECHHHHHHTTTTSCHHH
T ss_pred CCceEEEEeCCchHHHHHHhcccccccccCCcccCCEEEECCCChhhhhhHHHHHhcCCCeEEECHHHHHHHHhhCcccc
Confidence 4444 99999974321000000 00000013468999999999999999999754 4679999999987765322 1
Q ss_pred c-----CCCceEEcCCCcEEEE---CCEEEEEEEcc--------cC-----CCceEEEEEe-eCCcEEEEeCCCCCCccc
Q 014242 185 V-----NPSYIHPLELNTEHVI---DGVKVTLLEAN--------HC-----PGAALIHFRL-QDGQCYLHTGDFRASRLM 242 (428)
Q Consensus 185 ~-----~~~~i~~v~~~~~~~i---~~~~V~~~~a~--------H~-----~Gs~~~~~~~-~~g~~ilytGD~~~~~~~ 242 (428)
. ....++++++++++.+ ++++|+++++. |. ..+++|+|+. .+|++++|+||++..++.
T Consensus 129 ~~~~~~~~i~~~~i~~g~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y~~Dt~~~~~~ 208 (321)
T 3jxp_A 129 MLSHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEK 208 (321)
T ss_dssp HHTTTTTCEEEEECCSSSCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEEESSCCCCCHH
T ss_pred ccccccCceeEEEcCCCCeEEeccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEEECCCCCCCHH
Confidence 0 1134678888999999 99999999997 74 4789999982 267899999999865443
Q ss_pred cccccccCCCccEEEEecCCCC
Q 014242 243 QSYPLLVNHRVNVLYLDTTYCN 264 (428)
Q Consensus 243 ~~~~~l~~~~~D~Li~E~Ty~~ 264 (428)
. ...+ +++|+||+|||+..
T Consensus 209 ~-~~~~--~~~D~li~eat~~~ 227 (321)
T 3jxp_A 209 L-LAMM--HGADCLLVDGTLWE 227 (321)
T ss_dssp H-HHHH--HHCSEEEEECCCSS
T ss_pred H-HHHh--cCCCEEEEeCCCCC
Confidence 2 1222 57999999999865
No 23
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.56 E-value=2.7e-14 Score=136.85 Aligned_cols=115 Identities=17% Similarity=0.190 Sum_probs=89.1
Q ss_pred CccEEEeCCCchhhhCCccc--ccCCCcEEeC-HHHHHHHHHhhccCCCceEEcCCCcEEEECCEEEEEEEcccCCC---
Q 014242 143 GCSAYFLTHFHYDHYGGLGK--RWSHGPIYCS-PLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPG--- 216 (428)
Q Consensus 143 ~id~v~iTH~H~DHiggL~~--~~~~~~Iy~s-~~t~~~l~~~~~~~~~~i~~v~~~~~~~i~~~~V~~~~a~H~~G--- 216 (428)
++|+|||||.|.||++++.. .....+||++ ..+...++.. +.. .++.+ ++++++++++|+++++.|.++
T Consensus 64 ~id~iliTH~H~DH~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-g~~--~~~~~--~~~~~~~~~~i~~~pa~H~~~~~~ 138 (264)
T 3rpc_A 64 NVTAVVVTHTHLDHWDDTAINSIPKSLPIFVQNTADKELITSQ-GFI--DVRII--FESLEFNGITLRKTGGSHGTVEMY 138 (264)
T ss_dssp TCCEEECSCCCGGGSCHHHHHHSCTTSCEEESSHHHHHHHHHT-TCS--CEEEC--SSEEEETTEEEEEECCCSSCHHHH
T ss_pred cCCEEEECCCchhhCCCHHHHhhccCCeEEEeCHHHHHHHHhc-CCC--eeEEe--cccEEECCEEEEEeccccCCcccc
Confidence 79999999999999999874 3356799999 7777766532 332 34444 689999999999999999764
Q ss_pred -----------ceEEEEEeeCCcEEEEeCCCCCCccccccccccCCCccEEEEecCCCC
Q 014242 217 -----------AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCN 264 (428)
Q Consensus 217 -----------s~~~~~~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~D~Li~E~Ty~~ 264 (428)
.++|+|+.+++++++|+||+.+.+++.... ...++|+++++++...
T Consensus 139 ~~p~~~~~~~~~~g~~i~~~~~~~i~~~GDt~~~~~~~~~~--~~~~~Dv~il~~g~~~ 195 (264)
T 3rpc_A 139 ANPVLAPLAGDAMGVIFEAADEPTVYLVGDTVWTSDVEKAL--LRFDPNVIIMNTGYAQ 195 (264)
T ss_dssp TSTTHHHHHCCCCEEEEECTTSCCEEECCSCCSCHHHHHHH--HHHCCSEEEEECSCBC
T ss_pred ccccccccccccEEEEEEeCCccEEEEECCcCchHHHHHHH--HHhCCCEEEEecCccc
Confidence 589999985467999999999987754211 1246899999998543
No 24
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.42 E-value=4.5e-13 Score=128.30 Aligned_cols=99 Identities=17% Similarity=0.194 Sum_probs=77.2
Q ss_pred CCccEEEeCCCchhhhCCcccccCCCcEEeCHHHHHHHHHhhcc-----------------CCCceEEcC-CCcEEEEC-
Q 014242 142 KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV-----------------NPSYIHPLE-LNTEHVID- 202 (428)
Q Consensus 142 ~~id~v~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~~-----------------~~~~i~~v~-~~~~~~i~- 202 (428)
.+|++||+||.|.||++|++.+ ...+||+++.+.+.+...... ....+..++ .++.+.++
T Consensus 102 ~~i~~VilTH~H~DH~gg~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~ 180 (276)
T 2r2d_A 102 DDISTVVLSHLHNDHAGCVEYF-GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAP 180 (276)
T ss_dssp GGCSEEECSCCSTTTSTTGGGC-SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEET
T ss_pred HHCCEEEecCcccccCCChhhC-CCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEecC
Confidence 4799999999999999999977 678999999887655432110 123466777 47888885
Q ss_pred CEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCcc
Q 014242 203 GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241 (428)
Q Consensus 203 ~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~~ 241 (428)
+++|.....||++|+++++++.+++.+++|+||+.+...
T Consensus 181 ~~~v~~~~pgHt~g~~~~~~~~~~~~~vl~~GD~~~~~~ 219 (276)
T 2r2d_A 181 GVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTAT 219 (276)
T ss_dssp TEEEEEEESSSSSSEEEEEEECSSSCEEEEEETTSCCHH
T ss_pred CEEEEeCCCCCCceeEEEEEEcCCCceEEEEechhhhHH
Confidence 889988823999999999999743268999999998654
No 25
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.39 E-value=2.6e-13 Score=143.28 Aligned_cols=192 Identities=13% Similarity=0.147 Sum_probs=119.4
Q ss_pred cCCceEEEcCCCCCCCCC--------------------cceEecCCCcCCCCCccEEEeCCCchhhhCCccccc---CCC
Q 014242 111 HLKKIVDRSCPFYKKIPG--------------------TPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW---SHG 167 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~--------------------~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~---~~~ 167 (428)
.++..+|||||.....+. ....++.+....+.+||+|||||.|.||++|++.+. ...
T Consensus 25 ~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vilTH~H~DHiggl~~l~~~~~~~ 104 (547)
T 2bib_A 25 SNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGNVDELLSTYPVD 104 (547)
T ss_dssp ETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHTTHHHHHHHSCBS
T ss_pred eCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEEcCCCccccCCHHHHHHhCCcc
Confidence 356789999998532110 111223333345678999999999999999998642 233
Q ss_pred cEEeCHHHHHH----------------HHHhhccCCCceE--EcCCCcEEEECCEEEEEEEc---cc-----------CC
Q 014242 168 PIYCSPLTARL----------------VRMCLLVNPSYIH--PLELNTEHVIDGVKVTLLEA---NH-----------CP 215 (428)
Q Consensus 168 ~Iy~s~~t~~~----------------l~~~~~~~~~~i~--~v~~~~~~~i~~~~V~~~~a---~H-----------~~ 215 (428)
+||+++.+... +...+......+. .+..++.+.+++++|++++. .| ..
T Consensus 105 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~g~~~i~~l~~~~~~h~~~~~~~~~~~n~ 184 (547)
T 2bib_A 105 RVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFGDMDIQLYNYENETDSSGELKKIWDDNS 184 (547)
T ss_dssp EEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEETTEEEEEESCSCCBCTTSCBCCBSSGGG
T ss_pred EEEECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEecCCeeEEEecCccccCccccccccCCCCC
Confidence 58877543211 1111111111222 24667899999999999973 33 35
Q ss_pred CceEEEEEeeCCcEEEEeCCCCCCccccc-cccccCCCccEEEEecCCCCCCCCCC-ChHHHHHHHHHHHHHHHHhCCCe
Q 014242 216 GAALIHFRLQDGQCYLHTGDFRASRLMQS-YPLLVNHRVNVLYLDTTYCNPKYKFP-SKEDVLNYVVRLTKNCLKKQPKT 293 (428)
Q Consensus 216 Gs~~~~~~~~~g~~ilytGD~~~~~~~~~-~~~l~~~~~D~Li~E~Ty~~~~~~~p-s~~~~~~~l~~~i~~~l~~g~~~ 293 (428)
.|++++++. ++.+++|+||+....+... .... ..++|+|++ .+|. ++.....++++.+ +|+
T Consensus 185 ~S~vl~i~~-~~~~iLftGD~~~~~~~e~~l~~~-~~~~DvLkv--------~HHG~S~~s~s~~fl~~v------~P~- 247 (547)
T 2bib_A 185 NSLISVVKV-NGKKIYLGGDLDNVHGAEDKYGPL-IGKVDLMKF--------NHHHDTNKSNTKDFIKNL------SPS- 247 (547)
T ss_dssp GCCEEEEEE-TTEEEEECTTCCSTTSHHHHHHHH-HCCCSEEEC--------TTTTBCSSSSCHHHHHHH------CCS-
T ss_pred CcEEEEEEE-CCEEEEecCCccchhhhhhhhccc-ccceeEEEe--------ccccCcccCChHHHHHhc------CCc-
Confidence 689999998 6679999999987633211 0101 257999975 2343 4433445666655 366
Q ss_pred EEEEccccccH-------HHHHHHHHHHcCCeEEEe
Q 014242 294 LVVVGAYSIGK-------ESVFLAISKALGVKIYAN 322 (428)
Q Consensus 294 lvli~~~slGr-------eqell~i~~~~~~~I~v~ 322 (428)
+++|.+ |+ .+++++.+++.+++++..
T Consensus 248 ~aiiS~---g~~n~~~hP~~evl~~l~~~g~~v~~T 280 (547)
T 2bib_A 248 LIVQTS---DSLPWKNGVDSEYVNWLKERGIERINA 280 (547)
T ss_dssp EEEESB---SSCSBSSSBCHHHHHHHHTTTCEEEEC
T ss_pred EEEEcC---CcccccCCCCHHHHHHHHhCCceEEEe
Confidence 344433 43 478999999999999874
No 26
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.39 E-value=4.5e-13 Score=129.38 Aligned_cols=126 Identities=13% Similarity=0.131 Sum_probs=91.2
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCC--CCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHhhc--
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSI--KGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCLL-- 184 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i--~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~~-- 184 (428)
.++..++||||..... +..++.+....+ .+|++||+||.|.||++|++.+. ...+||+++.+...+.....
T Consensus 62 ~~~~~iLID~G~~~~~---~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 138 (294)
T 3m8t_A 62 TSQGLILMDTAMPQST---GMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKETGAQLVAGERDKPLLEGGYYPG 138 (294)
T ss_dssp ETTEEEEECCCCGGGH---HHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHHCCEEEEEGGGHHHHHHTCBTT
T ss_pred ECCceEEEECCCchhH---HHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhccCCEEEEChHHHHHHhcccccC
Confidence 4567899999973210 111122211122 36999999999999999999643 46799999999887765411
Q ss_pred --------c-CCCceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCC---cEEEEeCCCCCC
Q 014242 185 --------V-NPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDG---QCYLHTGDFRAS 239 (428)
Q Consensus 185 --------~-~~~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g---~~ilytGD~~~~ 239 (428)
. .......+..++.+.+++++|+++++ ||++|+++++++..++ .+++|+||+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~~~~~~~~~~~lf~GD~~~~ 206 (294)
T 3m8t_A 139 DEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTVKDGKEDREVLFFCSGTVA 206 (294)
T ss_dssp BTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCCCT
T ss_pred ccccccCCCCCCCCceEeCCCCEEEeCCEEEEEEeCCCCCccCEEEEEEccCCCccceEEEEcCccCC
Confidence 0 11234668889999999999999996 8999999999986432 279999999854
No 27
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.39 E-value=6.9e-13 Score=126.44 Aligned_cols=125 Identities=11% Similarity=0.118 Sum_probs=89.5
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCC--CCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHhh---
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGS--IKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCL--- 183 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~--i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~--- 183 (428)
.++..+++|||..... ....+.+.... ..+|++||+||.|.||++|++.+. +..+||+++.+.+.+....
T Consensus 32 ~~~~~iLID~G~~~~~---~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 108 (263)
T 1k07_A 32 TPRGNILINSDLEANV---PMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQTKAKYMVMDEDVSVILSGGKSD 108 (263)
T ss_dssp ETTEEEEECCCCGGGH---HHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHHCCEEEEEHHHHHHHHTTTTTC
T ss_pred eCCceEEEECCCcccH---HHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHhcCCEEEEcHHHHHHHhcccccc
Confidence 4567899999985210 01111111111 246999999999999999998653 4679999999888765421
Q ss_pred ---c------c-CCCceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEee-CC--cEEEEeCCCCC
Q 014242 184 ---L------V-NPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQ-DG--QCYLHTGDFRA 238 (428)
Q Consensus 184 ---~------~-~~~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~-~g--~~ilytGD~~~ 238 (428)
+ . .......+..++.+.+++.+|+++++ ||++|+++++++.. .+ .+++|+||+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~i~~pGHt~g~~~~~~~~~~~~~~~~~lf~GD~~~ 177 (263)
T 1k07_A 109 FHYANDSSTYFTQSTVDKVLHDGERVELGGTVLTAHLTPGHTRGCTTWTMKLKDHGKQYQAVIIGSIGV 177 (263)
T ss_dssp TTTTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEEECCCCC
T ss_pred cccCccccccCCCCCcceEeCCCCEEEECCeEEEEEECCCCCCCcEEEEEecccCCceeEEEEECCccc
Confidence 1 0 01234668889999999999999987 89999999999863 23 27999999865
No 28
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.37 E-value=3e-13 Score=136.57 Aligned_cols=121 Identities=16% Similarity=0.100 Sum_probs=90.7
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCcC-CCCCccEEEeCCCchhhhCCcccc---cCCCcEEeCHHHHHHHHHhhccCC
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLLVNP 187 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~~-~i~~id~v~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~~~~ 187 (428)
++..+++|||..... +..++.+... ...+|++||+||.|.||++|++.+ .+..+||+++.+.+.+...++.+.
T Consensus 42 ~~~~iliD~G~~~~~---~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~ 118 (402)
T 1e5d_A 42 DEKTTLFDTVKAEYK---GELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLGQKAMESHFHYKD 118 (402)
T ss_dssp SSSCEEECCCCGGGH---HHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHHHHHHHHHHCCSS
T ss_pred CCCEEEEeCCCCccH---HHHHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHCCCCEEEEChHHHHHHHHHhCCCC
Confidence 346899999975210 0011111111 236799999999999999999864 246899999999988876665444
Q ss_pred CceEEcCCCcEEEECCEEEEEEEc--ccCCCceEEEEEeeCCcEEEEeCCCCC
Q 014242 188 SYIHPLELNTEHVIDGVKVTLLEA--NHCPGAALIHFRLQDGQCYLHTGDFRA 238 (428)
Q Consensus 188 ~~i~~v~~~~~~~i~~~~V~~~~a--~H~~Gs~~~~~~~~~g~~ilytGD~~~ 238 (428)
.....++.++.+.+++.+|+++++ ||++|++++++. + .+++|+||+..
T Consensus 119 ~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~~--~-~~~l~~GD~~~ 168 (402)
T 1e5d_A 119 WPVQVVKHGETLSLGKRTVTFYETRMLHWPDSMVSWFA--D-EKVLISNDIFG 168 (402)
T ss_dssp CCEEEECTTCEEECSSCEEEEEECTTSSSTTCEEEEET--T-TTEEEEETTTC
T ss_pred CceEEcCCCCEEEECCCEEEEEeCCCCCCCCcEEEEEC--C-CCEEEeccccc
Confidence 567889999999999999999988 699999998763 3 47999999953
No 29
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.35 E-value=1e-12 Score=132.76 Aligned_cols=121 Identities=14% Similarity=0.161 Sum_probs=90.5
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcC----CCCCccEEEeCCCchhhhCCcccc---cCCCcEEeCHHHHHHHHHhh
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG----SIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCL 183 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~----~i~~id~v~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~ 183 (428)
.++..+++|||..... +..++.+... ...+|++||+||.|.||++|++.+ .+..+||+++.+.+.+...+
T Consensus 42 ~~~~~iLiD~g~~~~~---~~~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~~~~~~~~~~~~~ 118 (404)
T 2ohh_A 42 GDEGVALIDNSYPGTF---DELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEVAVKGLLKHY 118 (404)
T ss_dssp CSSCEEEECCCCTTCH---HHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHSTTCCEEECHHHHHHHHHHC
T ss_pred eCCcEEEEeCCCCccH---HHHHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHHCCCCEEEECHHHHHHHHHHh
Confidence 4556899999985211 1111111111 236899999999999999999864 34789999999988877654
Q ss_pred ccC-CCceEEcCCCcEEEECCEEEEEEEc--ccCCCceEEEEEeeCCcEEEEeCCCC
Q 014242 184 LVN-PSYIHPLELNTEHVIDGVKVTLLEA--NHCPGAALIHFRLQDGQCYLHTGDFR 237 (428)
Q Consensus 184 ~~~-~~~i~~v~~~~~~~i~~~~V~~~~a--~H~~Gs~~~~~~~~~g~~ilytGD~~ 237 (428)
+.+ ......++.++.+.+++.+|+++++ ||++|++++++.. .+++|+||+-
T Consensus 119 ~~~~~~~~~~~~~g~~~~~g~~~i~~~~~p~gH~~~~~~~~~~~---~~~lf~GD~~ 172 (404)
T 2ohh_A 119 PSLREAEFMTVKTGDVLDLGGKTLTFLETPLLHWPDSMFTLLDE---DGILFSNDAF 172 (404)
T ss_dssp GGGGGSCEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEEET---TTEEECTTTT
T ss_pred cccccCCceEcCCCCEEEECCEEEEEEeCCCCCCCCceEEEECC---CcEEEecCcc
Confidence 432 2357788999999999999999998 5999999998763 3699999986
No 30
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.34 E-value=2.4e-12 Score=121.79 Aligned_cols=97 Identities=19% Similarity=0.198 Sum_probs=71.9
Q ss_pred CCccEEEeCCCchhhhCCcccccCCCcEEeCHHHHHHHHHhhc------cCCCceEEcCCCcEEEECCEEEEEEEcccCC
Q 014242 142 KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL------VNPSYIHPLELNTEHVIDGVKVTLLEANHCP 215 (428)
Q Consensus 142 ~~id~v~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~------~~~~~i~~v~~~~~~~i~~~~V~~~~a~H~~ 215 (428)
.+|++||+||.|.||++|++.+. +.+||+++.+.+.+..... ........+ .++...++++++...+ ||++
T Consensus 99 ~~I~~VilTH~H~DH~gg~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~p-GHt~ 175 (254)
T 3dha_A 99 DDLLYIISSHLHFDHAGGNGAFT-NTPIIVQRTEYEAALHREEYMKECILPHLNYKII-EGDYEVVPGVQLLYTP-GHSP 175 (254)
T ss_dssp GGCSEEECSCCSHHHHTTGGGCS-SSCEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEE-CSSEEEETTEEEEECC-SSST
T ss_pred HHCCEEEcCCChhhcCCChHHCC-CCEEEECHHHHHHhhccccccccccCcccceEEe-cCCccccCCEEEEECC-CCCC
Confidence 35999999999999999999764 6899999998877653211 111223333 4666667786665444 9999
Q ss_pred CceEEEEEeeCCcEEEEeCCCCCCcc
Q 014242 216 GAALIHFRLQDGQCYLHTGDFRASRL 241 (428)
Q Consensus 216 Gs~~~~~~~~~g~~ilytGD~~~~~~ 241 (428)
|+++++++..++++++|+||+.+...
T Consensus 176 g~~~~~~~~~~~~~vl~~GD~~~~~~ 201 (254)
T 3dha_A 176 GHQSLFIETEQSGSVLLTIDASYTKE 201 (254)
T ss_dssp TCEEEEEEETTTEEEEEEETTCSSHH
T ss_pred CCEEEEEEeCCCCEEEEEecccchhh
Confidence 99999999754568999999998654
No 31
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.33 E-value=1.9e-11 Score=114.22 Aligned_cols=114 Identities=17% Similarity=0.099 Sum_probs=77.0
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCcccccCCCcEEeCHHHHHHHHHhhccCCCce
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~~~~~~i 190 (428)
.++..+++|||.... .++. ...++|+|||||.|.||++ ++.+..+.+++
T Consensus 27 ~~~~~iLiD~g~~~~------~~~~----~~~~id~VliTH~H~DH~~-~~~l~~~~~vi-------------------- 75 (220)
T 1vjn_A 27 MEGKTIVTDPFDESV------GYPI----PNVTADVVTESHQHFDHNA-HHLVKGNFRVI-------------------- 75 (220)
T ss_dssp ETTEEEEESCCC-----------CC----CCCBCSEEECSSCC---CG-GGGCBSSCEEE--------------------
T ss_pred ECCEEEEEcCCCCcC------CCCc----CCCCcCEEEECCCCCCCCC-chHhcCCCEEE--------------------
Confidence 466789999997531 1111 2367999999999999998 66443222222
Q ss_pred EEcCCCcEEEECCEEEEEEEcccCC------C-ceEEEEEeeCCcEEEEeCCCCCCccccccccccCCCccEEEEecC
Q 014242 191 HPLELNTEHVIDGVKVTLLEANHCP------G-AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTT 261 (428)
Q Consensus 191 ~~v~~~~~~~i~~~~V~~~~a~H~~------G-s~~~~~~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~D~Li~E~T 261 (428)
.....+++++++|+++++.|.. | +++|+++. +|++++|+||+.+.+....... ..++|++++++.
T Consensus 76 ---~~~g~~~~~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~-~g~~i~~~GDt~~~~~~~~~~~--~~~~Dvlil~~g 147 (220)
T 1vjn_A 76 ---DRPGAYTVNGVKIKGVETFHDPSHGRERGKNIVFVFEG-EGIKVCHLGDLGHVLTPAQVEE--IGEIDVLLVPVG 147 (220)
T ss_dssp ---CSSEEEEETTEEEEEEEEEEC-------CEEEEEEEEE-TTEEEEECTTCCSCCCHHHHHH--HCCCSEEEEECC
T ss_pred ---cCCCeEEECCEEEEEEeeecCCCCCccCCCcEEEEEEE-CCeEEEEeCCCCCcchHHHHHh--hCCCCEEEEcCC
Confidence 1233778899999999999965 2 58999987 6789999999998765221111 258999999984
No 32
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.31 E-value=3.2e-13 Score=129.13 Aligned_cols=118 Identities=15% Similarity=0.099 Sum_probs=88.6
Q ss_pred CceEEEcCCCCCCCCCcceEecCCCc-CCCCCccEEEeCCCchhhhCCcccc---cCCCcEEeCHHHHHHHHHhhccCCC
Q 014242 113 KKIVDRSCPFYKKIPGTPFTVDAFRY-GSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLLVNPS 188 (428)
Q Consensus 113 ~~~~liDcG~~~~~~~~~~~iD~f~~-~~i~~id~v~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (428)
+..++||||...... ..+..+.. ....+|++|++||.|.||++|++.+ .+..+||+++.+.+.+...+.....
T Consensus 51 ~~~iLID~G~~~~~~---~~~~~l~~~~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 127 (262)
T 3hnn_A 51 DKTAIIDPPVESFMK---IYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLRAAFPDDNL 127 (262)
T ss_dssp SSEEEECCCCHHHHH---HHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHHCTTCEEEECHHHHHHHHHHSSSSCC
T ss_pred CCEEEEECCCcchHH---HHHHHHHHhCChhhCCEEEECCCCcchhchHHHHHHHCCCCEEEECHHHHHHHHHHhCCCCC
Confidence 578999999742100 00111100 0235799999999999999999863 3578999999999888766654445
Q ss_pred ceEEcCCCcEEEEC-CEEEEEEEc-c-cCCCceEEEEEeeCCcEEEEeCCC
Q 014242 189 YIHPLELNTEHVID-GVKVTLLEA-N-HCPGAALIHFRLQDGQCYLHTGDF 236 (428)
Q Consensus 189 ~i~~v~~~~~~~i~-~~~V~~~~a-~-H~~Gs~~~~~~~~~g~~ilytGD~ 236 (428)
..+.++.++.+.++ +.+++++++ + |++|++++++. + .+++||||+
T Consensus 128 ~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~g~~~~~~~--~-~~~lfsGD~ 175 (262)
T 3hnn_A 128 NILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYDV--Q-TQILYTDKI 175 (262)
T ss_dssp EEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEET--T-TTEEEEETT
T ss_pred ceEEeCCCCEEEcCCCcEEEEEECCCCCCCCeeEEEeC--C-CCEEEEeec
Confidence 67889999999998 889999988 6 99999988764 2 369999999
No 33
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.30 E-value=2.5e-12 Score=129.67 Aligned_cols=120 Identities=12% Similarity=0.069 Sum_probs=89.4
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCc-CCCCCccEEEeCCCchhhhCCcccc---cCCCcEEeCHHHHHHHHHhhccCC
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRY-GSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLLVNP 187 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~-~~i~~id~v~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~~~~ 187 (428)
++..+++|||...... ..++.+.. ....+|++||+||.|.||++|++.+ .+..+||+++.+.+.+...++.+.
T Consensus 43 ~~~~iliD~g~~~~~~---~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~~~~~~~~ 119 (398)
T 1ycg_A 43 DDKTALVDTVYEPFKE---ELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSLKAHYSHID 119 (398)
T ss_dssp SSSCEEECCCCGGGHH---HHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCTTCEEEECHHHHHHHHHHTCSCC
T ss_pred CCCEEEEeCCCcccHH---HHHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHHCCCCEEEEcHHHHHHHHHHhCCCC
Confidence 3458999999852100 01111111 0236899999999999999999864 346899999999888876655443
Q ss_pred CceEEcCCCcEEEECCEEEEEEEc--ccCCCceEEEEEeeCCcEEEEeCCCC
Q 014242 188 SYIHPLELNTEHVIDGVKVTLLEA--NHCPGAALIHFRLQDGQCYLHTGDFR 237 (428)
Q Consensus 188 ~~i~~v~~~~~~~i~~~~V~~~~a--~H~~Gs~~~~~~~~~g~~ilytGD~~ 237 (428)
.....++.++.+.+++.+|+++++ ||++|++++++. + .+++|+||+.
T Consensus 120 ~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~~--~-~~~lf~GD~~ 168 (398)
T 1ycg_A 120 FNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFTYVP--E-EALLLPNDAF 168 (398)
T ss_dssp CEEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEET--T-TTEEEEETTT
T ss_pred cceEEeCCCCEEeeCCcEEEEEeCCCCCCCCcEEEEEC--C-CcEEEecccc
Confidence 467788999999999999999986 599999988763 3 4799999994
No 34
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.29 E-value=1.6e-12 Score=120.11 Aligned_cols=121 Identities=17% Similarity=0.105 Sum_probs=89.6
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc-CCCcEEeCHHHHHHHHHhhccCCCc
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPSY 189 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (428)
.++..+++|||...... ...++.+......+|++||+||.|.||++|++.+. ...+||+++.+.+.+..... ...
T Consensus 38 ~~~~~iLiD~G~~~~~~--~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~--~~~ 113 (219)
T 3l6n_A 38 TKKGVVLFDVPWEKVQY--QSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNNKGIKTYATAKTNEFLKKDGK--ATS 113 (219)
T ss_dssp ETTEEEEESCCSSGGGH--HHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHHTTCEEEECHHHHHHHHHTTC--CCC
T ss_pred eCCEEEEEeCCCChHHH--HHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHhCCCEEEEcHHHHHHHHhcCC--CCC
Confidence 46789999999743110 01112111101157999999999999999999643 47799999999887765321 234
Q ss_pred eEEcCCCcEEEECCEEEEEEE--cccCCCceEEEEEeeCCcEEEEeCCCCC
Q 014242 190 IHPLELNTEHVIDGVKVTLLE--ANHCPGAALIHFRLQDGQCYLHTGDFRA 238 (428)
Q Consensus 190 i~~v~~~~~~~i~~~~V~~~~--a~H~~Gs~~~~~~~~~g~~ilytGD~~~ 238 (428)
...++.++.+.+++++|++++ .||++|+++++++ + .+++|+||+-+
T Consensus 114 ~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~-~~~lf~GD~~~ 161 (219)
T 3l6n_A 114 TEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVVWFP--K-YNVLDGGCLVK 161 (219)
T ss_dssp SEECCTTSEEEETTEEEEEECCCCSSSSSCCEEEET--T-TTEEEEETTSC
T ss_pred cEecCCCCEEEECCEEEEEEeCCCCCCCCCEEEEEC--C-CCEEEECCeee
Confidence 677889999999999999997 4999999999985 3 36999999876
No 35
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.27 E-value=1.6e-11 Score=118.63 Aligned_cols=126 Identities=17% Similarity=0.189 Sum_probs=89.1
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCC--CCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHhhc--
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGS--IKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCLL-- 184 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~--i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~~-- 184 (428)
.++..+++|||..... +..++.+.... ..+|++||+||.|.||++|+..+. ...+||+++.+...+.....
T Consensus 65 ~~~~~iLiD~G~~~~~---~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~l~~~~~~~ 141 (303)
T 4ax1_B 65 SDAGHILVDAATPQAG---PQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKATGAPVYARAPAIDTLKRGLPDR 141 (303)
T ss_dssp CTTCEEEECCBSTTCH---HHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHHCCCEEEEHHHHHHHHHTSCCT
T ss_pred eCCcEEEEECCCcccH---HHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhcCCEEEEcHHHHHHHhccccCc
Confidence 4667899999973211 11112221111 235999999999999999999643 47899999999887765421
Q ss_pred -----------cCCCceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCCc--EEEEeCCCCCC
Q 014242 185 -----------VNPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQ--CYLHTGDFRAS 239 (428)
Q Consensus 185 -----------~~~~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g~--~ilytGD~~~~ 239 (428)
......+.+..++.+.+++.+|+++++ ||++|+++++++..++. ..+++||+-+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~g~~~~~~~~~~~~~~~~~l~gD~l~~ 210 (303)
T 4ax1_B 142 TDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTPGGTSWTWRSCEGDDCRQMVYADSLTA 210 (303)
T ss_dssp TSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCCC
T ss_pred cccccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCCCCccceEEEEEecCCCceeEEEEeCCccc
Confidence 012346788999999999999999986 89999999999863221 23555998763
No 36
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.26 E-value=2e-12 Score=118.90 Aligned_cols=120 Identities=14% Similarity=0.047 Sum_probs=84.5
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHh-------
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMC------- 182 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~------- 182 (428)
++..+++|||.... ...+.+.... .++++|++||.|.||++|++.+. ...+||+++.+.+.+...
T Consensus 23 ~~~~iLiD~G~~~~-----~l~~~l~~~g-~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 96 (210)
T 2xf4_A 23 TRLAALVDPGGDAE-----KIKQEVDASG-VTLMQILLTHGHLDHVGAASELAQHYGVPVIGPEKEDEFWLQGLPAQSRM 96 (210)
T ss_dssp TCEEEEECCCSCHH-----HHHHHHHHHT-CEEEEEECSCSCHHHHTTHHHHHHHHTCCEECCCGGGHHHHHTHHHHHHH
T ss_pred CCcEEEEcCCCCHH-----HHHHHHHHcC-CceeEEEECCCChhhhcCHHHHHHHcCCcEEEecchHHHHhccchhhhhh
Confidence 45789999995211 1111111112 24899999999999999998643 367999998776554321
Q ss_pred hccC----CCceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCCcEEEEeCCCCCCc
Q 014242 183 LLVN----PSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRASR 240 (428)
Q Consensus 183 ~~~~----~~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g~~ilytGD~~~~~ 240 (428)
++.+ ......++.++.+.+++.+|+++++ ||++|+++++++ +.+++|+||+.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~---~~~~lf~GD~~~~~ 156 (210)
T 2xf4_A 97 FGLDECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDE---QSQLLISGDVIFKG 156 (210)
T ss_dssp TTCCCCCCCCCSBCCCTTCEEEETTEEEEEEECCSSSTTCEEEEET---TTTEEEEETSEETT
T ss_pred cCCcccCCCCCceEECCCCEEEECCeEEEEEECCCCCCCcEEEEeC---CCCEEEECCEeccC
Confidence 2221 0123557789999999999999987 899999999874 34799999997643
No 37
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.26 E-value=1.3e-11 Score=118.00 Aligned_cols=126 Identities=14% Similarity=0.111 Sum_probs=87.1
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCC--CCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHhh---
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSI--KGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCL--- 183 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i--~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~--- 183 (428)
.++..++||||..... +..++.+....+ .+|++||+||.|.||++|+..+. ...+||+++.+...+....
T Consensus 45 ~~~~~iLID~G~~~~~---~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~l~~~~~~~ 121 (269)
T 1sml_A 45 TPDGAVLLDGGMPQMA---SHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRTGAKVAANAESAVLLARGGSDD 121 (269)
T ss_dssp ETTEEEEECCBSGGGH---HHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHSSCEEEECHHHHHHHHTTTCSB
T ss_pred eCCceEEEECCCCccH---HHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhcCCeEEECHHHHHHHhcCCccc
Confidence 4567899999974210 011122211122 37999999999999999998643 4679999999887765321
Q ss_pred ---cc----CC-CceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEee-CCc-EEEEeCCCCCC
Q 014242 184 ---LV----NP-SYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQ-DGQ-CYLHTGDFRAS 239 (428)
Q Consensus 184 ---~~----~~-~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~-~g~-~ilytGD~~~~ 239 (428)
+. .+ .....++.++.+.+++++|+++++ ||++|+++++++.. +++ +.+++||+-+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~g~~~~~~~~~~~~~~~~l~~gD~l~~ 188 (269)
T 1sml_A 122 LHFGDGITYPPANADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIAYADSLSA 188 (269)
T ss_dssp TTTBTSSCCCCCCCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCCC
T ss_pred cccccccCCCCCCCCeEeCCCCEEEECCEEEEEEECCCCCcccEEEEEecccCCceeEEEEeccccC
Confidence 10 11 124668889999999999999998 79999999998752 232 35555898663
No 38
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.25 E-value=4.2e-12 Score=122.31 Aligned_cols=126 Identities=13% Similarity=0.107 Sum_probs=81.1
Q ss_pred cCCceEEEcCCCCCCCC-----------CcceEecCCCcC--CCCCccEEEeCCCchhhhCCccccc-----CCCcEEeC
Q 014242 111 HLKKIVDRSCPFYKKIP-----------GTPFTVDAFRYG--SIKGCSAYFLTHFHYDHYGGLGKRW-----SHGPIYCS 172 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~-----------~~~~~iD~f~~~--~i~~id~v~iTH~H~DHiggL~~~~-----~~~~Iy~s 172 (428)
.++..+++|||...... .....++.+... ...+|++||+||.|.||+||++.+. +..+||++
T Consensus 55 ~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~~~fp~a~i~~~ 134 (280)
T 3esh_A 55 TAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQ 134 (280)
T ss_dssp CSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCCSSTTCEEEEE
T ss_pred ECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccccCCCCCEEEEC
Confidence 56789999999864210 011111222211 2247999999999999999998543 47899999
Q ss_pred HHHHHHHHHhhc-----cC-------CCceEEcCCCcEEEE-CCEEEEEEEc-ccCCCceEEEEEeeCCcEEEEeCCCCC
Q 014242 173 PLTARLVRMCLL-----VN-------PSYIHPLELNTEHVI-DGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRA 238 (428)
Q Consensus 173 ~~t~~~l~~~~~-----~~-------~~~i~~v~~~~~~~i-~~~~V~~~~a-~H~~Gs~~~~~~~~~g~~ilytGD~~~ 238 (428)
+.+...+..... .. ...+..+.. ...+ .+ |+++++ ||++|+++++++. .+.+++||||+-+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~g--i~~~~~pGHt~g~~~~~i~~-~~~~vlftGD~~~ 209 (280)
T 3esh_A 135 QDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEK--HFEPVPG--IKMQHSGGHSFGHTIITIES-QGDKAVHMGDIFP 209 (280)
T ss_dssp HHHHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESS--EECSSTT--EEEEECCSSSTTCEEEEEEE-TTEEEEECGGGSC
T ss_pred HHHHHHhhCcccccccchhhhhhhhhhheEEEeCC--CCeEcCC--EEEEEcCCCCcccEEEEEEE-CCcEEEEEEccCC
Confidence 988876642110 00 012233322 2233 34 444555 8999999999997 5679999999988
Q ss_pred Ccc
Q 014242 239 SRL 241 (428)
Q Consensus 239 ~~~ 241 (428)
...
T Consensus 210 ~~~ 212 (280)
T 3esh_A 210 TTA 212 (280)
T ss_dssp SGG
T ss_pred chh
Confidence 654
No 39
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.24 E-value=3.2e-12 Score=124.50 Aligned_cols=127 Identities=11% Similarity=0.038 Sum_probs=88.7
Q ss_pred CCceEEEcCCCCCCCC-------CcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHH-
Q 014242 112 LKKIVDRSCPFYKKIP-------GTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRM- 181 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~-------~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~- 181 (428)
++..++||+|...... .....++...... .+|++||+||.|.||++|+..+. ...+||+++.+......
T Consensus 27 ~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~~a~i~~~~~~~~~~~~~ 105 (298)
T 4efz_A 27 SGECALIDSVLDYDPKSGRTRTASADQLIARVAALG-ARVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVF 105 (298)
T ss_dssp TCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHT-CEEEEEECSSCCSSSBCCHHHHHHHHCCEEEEETTHHHHHHHH
T ss_pred CCeEEEEcCCCCccccccccCcccHHHHHHHHHHCC-CcceEEEECCCchhhhhhHHHHHHHhCCcEEEChhHHHHHHHH
Confidence 5578999999732100 0001112222122 25899999999999999998643 36799999877655432
Q ss_pred --hhccCC-------CceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCCcE------EEEeCCCCCCc
Q 014242 182 --CLLVNP-------SYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQC------YLHTGDFRASR 240 (428)
Q Consensus 182 --~~~~~~-------~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g~~------ilytGD~~~~~ 240 (428)
.++... .....+..++.+.+++++|+++++ ||++|+++|++.. .+++ ++||||+-+.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~vi~tPGHT~g~~~~~~~~-~~~~~~~~~~~lftGD~l~~~ 179 (298)
T 4efz_A 106 GKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTE-AHAAHDARDAAAFVGDTLFMP 179 (298)
T ss_dssp HHHTTCCTTSCSSSTTSSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEE-TTCCGGGCBCEEECCSSBCCT
T ss_pred HHhcCCcccccccccCCCEEeCCCCEEEECCEEEEEEECCCCCcccEEEEECC-CcccccCCceEEEEcCccccC
Confidence 222211 123678899999999999999998 8999999999986 4434 99999997754
No 40
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.24 E-value=1.1e-11 Score=117.35 Aligned_cols=114 Identities=20% Similarity=0.239 Sum_probs=83.0
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHH---------
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVR--------- 180 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~--------- 180 (428)
++..+++|||....... + .. ..+|++||+||.|.||++|++.+. ...+||+++.+.+.+.
T Consensus 28 ~~~~iLiD~G~~~~~~~--l-----~~--~~~i~~vi~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~l~~~~~~~~~~ 98 (261)
T 3adr_A 28 EKLTVMIDAGVSNSIAD--F-----SF--LDKLDYIVLTHLHIDHIGLLPELLQVYKAKVLVKSGFKKYLTSEDGLKKLN 98 (261)
T ss_dssp SSCEEEECCCCTTCCCC--C-----TT--CSCCCEEECSCCSGGGTTTHHHHHHHSCCEEEEETTCTHHHHSHHHHHHHH
T ss_pred CCcEEEEeCCCCCChhh--c-----CC--CCCCcEEEECCCCccccCCHHHHHHHhCCeEEECHHHHHHhcCchhHHHHH
Confidence 36789999998653221 1 11 368999999999999999998642 3678999876543321
Q ss_pred -----------Hhhcc-----CCCceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCCcEEEEeCCCCCC
Q 014242 181 -----------MCLLV-----NPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 181 -----------~~~~~-----~~~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g~~ilytGD~~~~ 239 (428)
..++. +...+..++.++.+.+++++|+++++ ||++|+++|.+ + +++|+||+...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~~~~~~~~---~--~~lf~GD~~~~ 169 (261)
T 3adr_A 99 ESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHARHHMSVLV---D--DFLFTGDSAGA 169 (261)
T ss_dssp HHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEEEEEECTTSCTTCEEEEE---T--TEEEEETSSCE
T ss_pred HHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEECCEEEEEEECCCCCCccEEEEE---C--CEEEEcCcccc
Confidence 11111 11245778899999999999999997 79999999853 2 59999999763
No 41
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.20 E-value=9.6e-12 Score=126.33 Aligned_cols=121 Identities=9% Similarity=0.046 Sum_probs=87.7
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCc-CCCCCccEEEeCCCchhhhCCcccc---cCCCcEEeCHHHHHHHHHhhccCC
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRY-GSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLLVNP 187 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~-~~i~~id~v~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~~~~ 187 (428)
++..+++|||...... ..++.+.. ....+|++||+||.|.||++|+..+ .+..+||+++.+.+.+...++...
T Consensus 48 ~~~~iLID~G~~~~~~---~~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~ 124 (414)
T 2q9u_A 48 DECPTVIDSVKYPFAE---EWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLKILYGMEK 124 (414)
T ss_dssp SSSCEEECCCCGGGHH---HHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHHHHHHHHHHCCTT
T ss_pred CCCEEEEeCCCcccHH---HHHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHHCCCCEEEECHHHHHHHHHHhCCCC
Confidence 3568999999832100 01111110 0225799999999999999999853 247899999999887776555433
Q ss_pred CceEEcCCCcEEEECCEEEEEEEc--ccCCCceEEEEEeeCCcEEEEeCCCCC
Q 014242 188 SYIHPLELNTEHVIDGVKVTLLEA--NHCPGAALIHFRLQDGQCYLHTGDFRA 238 (428)
Q Consensus 188 ~~i~~v~~~~~~~i~~~~V~~~~a--~H~~Gs~~~~~~~~~g~~ilytGD~~~ 238 (428)
.....++.++.+.+++.+++++++ ||++|+++++.. + .+++|+||.-.
T Consensus 125 ~~~~~~~~g~~~~lg~~~~~~~~~p~gHt~~~~~~~~~--~-~~~lf~GD~~~ 174 (414)
T 2q9u_A 125 ATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTYCP--E-DKILFSNDGFG 174 (414)
T ss_dssp CCEEECCTTCCEECSSCEEEEEECTTSSSTTCEEEEET--T-TTEEEEETTTC
T ss_pred CeeEEeCCCCEEEECCeEEEEEeCCCCCCCCceEEEEC--C-CeEEEEccccc
Confidence 457788899999999988888887 699999887653 3 47999999643
No 42
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.20 E-value=7.1e-12 Score=119.87 Aligned_cols=126 Identities=15% Similarity=0.106 Sum_probs=82.0
Q ss_pred cCCceEEEcCCCCCCC------------CCcceEecCCCcC--CCCCccEEEeCCCchhhhCCcccccCCCcEEeCHHHH
Q 014242 111 HLKKIVDRSCPFYKKI------------PGTPFTVDAFRYG--SIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~------------~~~~~~iD~f~~~--~i~~id~v~iTH~H~DHiggL~~~~~~~~Iy~s~~t~ 176 (428)
.++..+|+|||..... .......+.+... ...+|++||+||.|.||++|++.+ ...+||+++...
T Consensus 42 ~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~-~~a~v~~~~~~~ 120 (274)
T 3aj3_A 42 HAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYF-PHAKKICHRSEV 120 (274)
T ss_dssp ETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGC-TTSEEEEETTHH
T ss_pred eCCccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhC-CCCEEEECHHHH
Confidence 4667899999985421 0000011111111 124799999999999999999976 677999998877
Q ss_pred HHHHHhhc------------------------------cCCCceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEee
Q 014242 177 RLVRMCLL------------------------------VNPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQ 225 (428)
Q Consensus 177 ~~l~~~~~------------------------------~~~~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~ 225 (428)
+.+..... .....+..++ +.+.+++ +++++.+ ||++|+++++++.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~g-~~~v~~~pGHt~g~~~~~~~~~ 197 (274)
T 3aj3_A 121 PQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFEGID--GDVDLAR-GVKLISTPGHSIGHYSLLVEFP 197 (274)
T ss_dssp HHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCEEEEC--SSEEEET-TEEEEECTTSSTTCEEEEECCS
T ss_pred HHHhCcCCccccccChhhhccccccccccccccccccccCCCCceEcC--CccccCC-EEEEEECCCCCceeeEEEEECC
Confidence 65542110 0012334443 3466677 4555555 89999999999864
Q ss_pred CCcEEEEeCCCCCCc
Q 014242 226 DGQCYLHTGDFRASR 240 (428)
Q Consensus 226 ~g~~ilytGD~~~~~ 240 (428)
++.+++|+||+.+..
T Consensus 198 ~~~~~lf~GD~~~~~ 212 (274)
T 3aj3_A 198 RRKPILFTIDAAYTQ 212 (274)
T ss_dssp SSCCEEEEETTCSSH
T ss_pred CCCEEEEEechhhhH
Confidence 245899999998765
No 43
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.20 E-value=3.3e-12 Score=118.93 Aligned_cols=125 Identities=15% Similarity=0.051 Sum_probs=80.4
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcC--CCCCccEEEeCCCchhhhCCcccccCCCcEEeCHHHHHH-HHH------
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG--SIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL-VRM------ 181 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~--~i~~id~v~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~-l~~------ 181 (428)
.++..+++|||...... ...+.+... ...+|++||+||.|.||++|++.+. ..+||+++..... +..
T Consensus 42 ~~~~~iLID~G~~~~~~---~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~~-~~~v~~~~~~~~~~~~~~~~~~~ 117 (221)
T 1ztc_A 42 HKDRRIIIDPGNLSSMD---ELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLFE-NATFYVHEVYKTKNYLSFGTIVG 117 (221)
T ss_dssp ETTEEEEECCCCGGGHH---HHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGCT-TCEEEEEGGGGGSCGGGGCHHHH
T ss_pred eCCeEEEEECCCCcchH---HHHHHHHHcCCCHHHCcEEEEcCCccccCCchhhCC-CCEEEEeHHHhhhhhhhhccchh
Confidence 46778999999742100 011111111 1247899999999999999998764 6789998762110 000
Q ss_pred -h---hccCCCceEEcCCCcEEEECCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCc
Q 014242 182 -C---LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240 (428)
Q Consensus 182 -~---~~~~~~~i~~v~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~ 240 (428)
. .......+..++.++.+..+++++...| ||++|+++++++.+++++++|+||+.+..
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~v~~~p-GHt~g~~~~~~~~~~~~~vlftGD~~~~~ 179 (221)
T 1ztc_A 118 RIYSKVISSWKNVVLLKGEESLFDEKVKVFHTP-WHAREHLSFLLDTENAGRVLITGDITPNR 179 (221)
T ss_dssp HHHHHHHHTCCSEEEECSCCEETTTTEEEEECC-SSSTTCEEEEEEETTTEEEEECGGGSCSH
T ss_pred hhhhhccccccceEEeCCCCEEECCeEEEEEcC-CCCcccEEEEEEcCCCCeEEEEeCccccc
Confidence 0 0001135677777776642356666655 99999999999973325899999998753
No 44
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.16 E-value=1.1e-11 Score=122.66 Aligned_cols=127 Identities=19% Similarity=0.186 Sum_probs=82.1
Q ss_pred cCCceEEEcCCCCCCCCC-cceEecCCCcC--CCCCccEEEeCCCchhhhCCccc----ccCCCcEEeCHHHHHHHHHhh
Q 014242 111 HLKKIVDRSCPFYKKIPG-TPFTVDAFRYG--SIKGCSAYFLTHFHYDHYGGLGK----RWSHGPIYCSPLTARLVRMCL 183 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~-~~~~iD~f~~~--~i~~id~v~iTH~H~DHiggL~~----~~~~~~Iy~s~~t~~~l~~~~ 183 (428)
.++..+|+|||....... .....+.+... ...+|++||+||.|.||++|+.. .+.+.+||+++.+.+.+....
T Consensus 104 ~~~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~~~fp~a~v~~~~~~~~~~~~~~ 183 (331)
T 1p9e_A 104 TGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQLAFPNAVVRADQKEADFWLSQT 183 (331)
T ss_dssp CSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEESSTTCEEECBHHHHHHHSCHH
T ss_pred ECCEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccccccCCCCEEEECHHHHHHHhCch
Confidence 467789999998642110 00011111111 12479999999999999999983 335789999998876442110
Q ss_pred ---ccC--------------------CCceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCCcEEEEeCCCCCC
Q 014242 184 ---LVN--------------------PSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 184 ---~~~--------------------~~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g~~ilytGD~~~~ 239 (428)
..+ ...++.++.++.+. .+ |+++++ ||++|+++|+++. ++++++|+||+.+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~-~g--i~vi~tpGHtpG~~~~~i~~-~~~~vlf~GD~~~~ 259 (331)
T 1p9e_A 184 NLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLV-PG--IKALASHGHTPGHTTYVVES-QGQKLALLGDLILV 259 (331)
T ss_dssp HHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECS-TT--EEEEECTTSSTTCEEEEEEE-TTEEEEECTTSCCC
T ss_pred hhccCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEc-cc--EEEEEcCCCChhCEEEEEEE-CCcEEEEEECccCc
Confidence 000 12344555555443 24 555555 9999999999997 56799999999986
Q ss_pred cc
Q 014242 240 RL 241 (428)
Q Consensus 240 ~~ 241 (428)
..
T Consensus 260 ~~ 261 (331)
T 1p9e_A 260 AA 261 (331)
T ss_dssp HH
T ss_pred ch
Confidence 53
No 45
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.16 E-value=2e-11 Score=113.39 Aligned_cols=121 Identities=17% Similarity=0.132 Sum_probs=87.4
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcC-CCCCccEEEeCCCchhhhCCccccc-CCCcEEeCHHHHHHHHHhhccCCC
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPS 188 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~-~i~~id~v~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (428)
.++..+++|||...... ...++.+... . .+|++||+||.|.||++|+..+. ...+||+++.+.+.+...... .
T Consensus 34 ~~~~~iLiD~G~~~~~~--~~~~~~l~~~~g-~~i~~vi~TH~H~DH~gg~~~~~~~~~~v~~~~~~~~~~~~~~~~--~ 108 (223)
T 1m2x_A 34 TDKGVVVIDCPWGEDKF--KSFTDEIYKKHG-KKVIMNIATHSHDDRAGGLEYFGKIGAKTYSTKMTDSILAKENKP--R 108 (223)
T ss_dssp ETTEEEEESCCSSGGGH--HHHHHHHHHHHC-CCEEEEECSSSSTTTTTTHHHHHHTTCEEEEEHHHHHHHHHTTCC--C
T ss_pred eCCEEEEEeCCCChhHH--HHHHHHHHHHhC-CCeEEEEeccCCccccCchhhHhhCCCeEEEcHHHHHHHHhcCcc--C
Confidence 45678999999742110 0011111111 1 47999999999999999998643 467999999988777543221 1
Q ss_pred ceEEcCCCcEEEECCEEEEEEE--cccCCCceEEEEEeeCCcEEEEeCCCCCC
Q 014242 189 YIHPLELNTEHVIDGVKVTLLE--ANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 189 ~i~~v~~~~~~~i~~~~V~~~~--a~H~~Gs~~~~~~~~~g~~ilytGD~~~~ 239 (428)
....+..++.+.+++.+|+++. .||++|+++++++ + .+++|+||+-..
T Consensus 109 ~~~~~~~g~~~~~g~~~i~~~~~~pgHt~~~~~~~~~--~-~~~lf~GD~~~~ 158 (223)
T 1m2x_A 109 AQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWFP--K-EKVLVGGCIIKS 158 (223)
T ss_dssp CSEEESSCEEEEETTEEEEEECCCSSSSSSCCEEEET--T-TTEEEEETTSCC
T ss_pred CceecCCCceEEECCEEEEEEecCCCCCCCCEEEEEC--C-CCEEEEeccccc
Confidence 2466788999999999999994 4999999999875 3 379999997653
No 46
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.16 E-value=1.2e-11 Score=117.32 Aligned_cols=113 Identities=16% Similarity=-0.020 Sum_probs=83.6
Q ss_pred CceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCcccc---cCCCcEEeCHHHHHHHHHhhccCCCc
Q 014242 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLLVNPSY 189 (428)
Q Consensus 113 ~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (428)
+..++||+|.... ...++.+.... .+|++||+||.|.||++|+..+ ....+||+++.+.. ..
T Consensus 28 ~~~ilID~g~~~~----~~~~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~----------~~ 92 (245)
T 2gcu_A 28 KPALLIDPVDKTV----DRDLKLIDELG-LKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGS----------KA 92 (245)
T ss_dssp CEEEEESCBGGGH----HHHHHHHHHHT-CEEEEEECSSCCSSSCBSHHHHHHHSTTCEEEEEGGGCC----------CC
T ss_pred CcEEEEeCCCchH----HHHHHHHHHCC-CeeeEEEeCCCChhhhhhHHHHHHhCCCCeEEecccccc----------cC
Confidence 5789999997420 01112222112 2589999999999999999864 45679999876531 13
Q ss_pred eEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeC---CcEEEEeCCCCCCc
Q 014242 190 IHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQD---GQCYLHTGDFRASR 240 (428)
Q Consensus 190 i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~---g~~ilytGD~~~~~ 240 (428)
...+..++.+.+++.+|+++.+ ||++|+++|+++..+ +.+++||||+.+..
T Consensus 93 ~~~~~~g~~~~~g~~~i~v~~tpGHt~g~~~~~~~~~~~~~~~~~lftGD~~~~~ 147 (245)
T 2gcu_A 93 DLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIR 147 (245)
T ss_dssp SEEECTTCEEEETTEEEEEEECCSSSTTCEEEEECCSTTSCSSCEEEEETTSBTT
T ss_pred CEEcCCCCEEEECCEEEEEEECCCCCCCCEEEEECCccccccccEEEECCccccC
Confidence 4577889999999999999998 999999999997531 23799999998753
No 47
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.16 E-value=1.2e-11 Score=113.71 Aligned_cols=117 Identities=21% Similarity=0.159 Sum_probs=78.5
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHh------
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMC------ 182 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~------ 182 (428)
.++..+++|||.... ...+.+.... .+|++|++||.|.||++|++.+. .+.+||+++.+.+.+...
T Consensus 20 ~~~~~iliD~G~~~~-----~l~~~l~~~g-~~i~~vilTH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~ 93 (207)
T 2zwr_A 20 TGEGPVLIDPGDEPE-----KLLALFQTTG-LIPLAILLTHAHFDHVGAVAPLVEALDLPVYLHPLDLPLYEGADLAARA 93 (207)
T ss_dssp ETTEEEEECCCSCHH-----HHHHHHHHHT-CCCSCEECSCCCGGGTTTHHHHHHHHCCCEEECGGGHHHHHTHHHHHHH
T ss_pred eCCcEEEEeCCCCHH-----HHHHHHHHcC-CcccEEEECCCChHHHccHHHHHHHhCCcEEECHHHHHHHhCchhhhhh
Confidence 456789999996321 1111111112 24899999999999999998643 267999999988766532
Q ss_pred hccCC----CceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCCcEEEEeCCCCCCc
Q 014242 183 LLVNP----SYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRASR 240 (428)
Q Consensus 183 ~~~~~----~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g~~ilytGD~~~~~ 240 (428)
++... .....++.++.+. .++++++ ||++|+++++++ +.+++|+||+.+..
T Consensus 94 ~g~~~~~~~~~~~~~~~g~~i~----~~~~~~~pGHt~g~~~~~~~---~~~~lf~GD~~~~~ 149 (207)
T 2zwr_A 94 WGLAIPKPPLPVRPLEEGMRLF----GFQVLHLPGHSPGHVAFYDP---EGAQVFSGDLLFRG 149 (207)
T ss_dssp TTCCCCCCCSCCEECCTTCEET----TEEEEECCSSSTTCEEEEET---TTTEEEEETSEETT
T ss_pred cCCCCCcCCCCceEeCCCCEEE----EEEEEeCCCCCCCcEEEEEC---CCCEEEEecccCCC
Confidence 12211 1345667777654 4455555 899999999985 34799999997643
No 48
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.15 E-value=4e-11 Score=122.22 Aligned_cols=148 Identities=15% Similarity=0.055 Sum_probs=104.5
Q ss_pred eeeccccCCccccccCCCCCceeeeccCCCCccc--cCCceEEEcCCCCCCCCCcceEecCCCc-CCCCCccEEEeCCCc
Q 014242 77 DMWGLKSNSESEANCLFSPPMKKLKASNGKSTAT--HLKKIVDRSCPFYKKIPGTPFTVDAFRY-GSIKGCSAYFLTHFH 153 (428)
Q Consensus 77 ~~w~~~~~~~~~~~~g~~~~~~~l~~g~~~~~~~--~~~~~~liDcG~~~~~~~~~~~iD~f~~-~~i~~id~v~iTH~H 153 (428)
.++|+|.+.+..+...+ .+. +-.|+..|+++ .++..+|||.|...... ..++.... ....+|++|++||.|
T Consensus 26 ~iy~vg~~d~~~~~Fe~--~~~-~~~GtsyNsYLI~~~~~~vLIDtg~~~~~~---~~l~~l~~~i~~~~IdyIi~TH~h 99 (410)
T 4dik_A 26 EIYVLRIDDDRIRYFEA--VWE-IPEGISYNAYLVKLNGANVLIDGWKGNYAK---EFIDALSKIVDPKEITHIIVNHTE 99 (410)
T ss_dssp EEEEEEEEECSCCEETT--TEE-CTTCEEEEEEEEECSSCEEEECCCCGGGHH---HHHHHHTTTSCGGGCCEEECSCCC
T ss_pred CEEEEeeecCCCcceee--eee-CCCceEEEEEEEEECCeEEEEeCCCcchHH---HHHHHHHHhcCcccCCEEEeCcCC
Confidence 38999998876653322 111 22344444554 35678899998643110 01111111 122579999999999
Q ss_pred hhhhCCcccc----cCCCcEEeCHHHHHHHHHhhccCCCceEEcCCCcEEEECCEEEEEEEc-c-cCCCceEEEEEeeCC
Q 014242 154 YDHYGGLGKR----WSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEA-N-HCPGAALIHFRLQDG 227 (428)
Q Consensus 154 ~DHiggL~~~----~~~~~Iy~s~~t~~~l~~~~~~~~~~i~~v~~~~~~~i~~~~V~~~~a-~-H~~Gs~~~~~~~~~g 227 (428)
.||+|+++.+ .+..+||+++....++...+.. ..+..++.|+.+.+++.+++++++ + |.||+++++. +
T Consensus 100 ~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l~~~~~~--~~~~~v~dGd~l~lG~~~L~~i~tPg~H~p~~~~~y~---~- 173 (410)
T 4dik_A 100 PDASGSLPATLKTIGHDVEIIASNFGKRLLEGFYGI--KDVTVVKDGEEREIGGKKFKFVMTPWLHWPDTMVTYL---D- 173 (410)
T ss_dssp HHHHTTHHHHHHHHCSCCEEEECHHHHHHHHHHHCC--CCEEECCTTCEEEETTEEEEEEECTTSSSTTCEEEEE---T-
T ss_pred cchhhhHHHHHHHcCCCCEEEeCHHHHHHHHhhcCc--cceeEecCCCEEeecceEEEEecCCCCCCCCCeeEEe---C-
Confidence 9999999853 3578999999999888877654 467889999999999999999998 6 8999988773 2
Q ss_pred cEEEEeCCCC
Q 014242 228 QCYLHTGDFR 237 (428)
Q Consensus 228 ~~ilytGD~~ 237 (428)
+++||||.-
T Consensus 174 -~iLFsgD~f 182 (410)
T 4dik_A 174 -GILFSCDVG 182 (410)
T ss_dssp -TEEEEETTT
T ss_pred -CceEccccc
Confidence 499999974
No 49
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.14 E-value=3.8e-11 Score=117.99 Aligned_cols=115 Identities=18% Similarity=0.185 Sum_probs=83.2
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCcC----C----CCCccEEEeCCCchhhhCCccccc--C-------CCcEEeCHH
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYG----S----IKGCSAYFLTHFHYDHYGGLGKRW--S-------HGPIYCSPL 174 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~~----~----i~~id~v~iTH~H~DHiggL~~~~--~-------~~~Iy~s~~ 174 (428)
++..++||+|.... ..++.+... . ..+|++||+||.|.||++|+..+. . ..+||++..
T Consensus 50 ~~~~ilID~G~~~~-----~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~~~v~~~~~ 124 (311)
T 2p18_A 50 THTLAAVDVNADYK-----PILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVPVVVVGGAN 124 (311)
T ss_dssp TTEEEEESCCSCCH-----HHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHHHHSCC--CCCEEEEEGG
T ss_pred CCcEEEEeCCCChH-----HHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHHHHhhhhcccCCCCEEEEech
Confidence 46789999975321 011111111 1 147999999999999999998642 1 578999865
Q ss_pred HHHHHHHhhccCCCceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeC--Cc-EEEEeCCCCCCc
Q 014242 175 TARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQD--GQ-CYLHTGDFRASR 240 (428)
Q Consensus 175 t~~~l~~~~~~~~~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~--g~-~ilytGD~~~~~ 240 (428)
.. . +.....+..++.+.+++.+|+++++ ||++|+++|+++.++ +. +++|+||+.+..
T Consensus 125 ~~--------~-~~~~~~l~~g~~l~lg~~~l~vi~tPGHT~g~i~~~~~~~~~~~~~~~lftGD~l~~~ 185 (311)
T 2p18_A 125 DS--------I-PAVTKPVREGDRVQVGDLSVEVIDAPCHTRGHVLYKVQHPQHPNDGVALFTGDTMFIA 185 (311)
T ss_dssp GT--------C-TTCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECTTCGGGCEEEEEETTEETT
T ss_pred hc--------C-CCCceEeCCCCEEEECCeEEEEEECCCCCcccEEEEEecCCcCCcCCEEEEcCccccC
Confidence 41 1 1245678889999999999999998 999999999998633 15 899999997643
No 50
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.13 E-value=3.3e-11 Score=117.71 Aligned_cols=125 Identities=16% Similarity=0.111 Sum_probs=86.1
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcC--CCCCccEEEeCCCchhhhCCcccccC-CCcEEeCHHHHHHHHHh-----
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG--SIKGCSAYFLTHFHYDHYGGLGKRWS-HGPIYCSPLTARLVRMC----- 182 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~--~i~~id~v~iTH~H~DHiggL~~~~~-~~~Iy~s~~t~~~l~~~----- 182 (428)
.++..++||||...... .....+.+... ...+|++||+||.|.||+||+..+.. ..+||+++.+...+...
T Consensus 29 ~~~~~ilID~G~~~~~~-~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~ 107 (317)
T 2zo4_A 29 GAGEVALVDTALGTRAA-RGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGLGARVFLHEEEFARGHRFWREPE 107 (317)
T ss_dssp ETTEEEEECCCCSSHHH-HHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHTTCEEEEEGGGTTTHHHHHHCTT
T ss_pred cCCceEEEECCCCCHHH-HHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhCCCEEEEcHHHHHHHHhhhhhhh
Confidence 35578999999854200 00011111111 12469999999999999999986421 67999998775443321
Q ss_pred ------------hccC--------------------CCceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCCcE
Q 014242 183 ------------LLVN--------------------PSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQC 229 (428)
Q Consensus 183 ------------~~~~--------------------~~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g~~ 229 (428)
.+.+ ......+..++.+.+++.+++++++ ||++|++++++. + .+
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~gg~~~~~i~tpGHt~g~~~~~~~--~-~~ 184 (317)
T 2zo4_A 108 AFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWTPGHADGHAAFYLE--E-EG 184 (317)
T ss_dssp TSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEETTEEEEEEECCSSSTTCEEEEET--T-TT
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeCCceEEEEECCCCCcccEEEEeC--C-CC
Confidence 0111 1245678889999999999999998 999999999763 3 46
Q ss_pred EEEeCCCCCC
Q 014242 230 YLHTGDFRAS 239 (428)
Q Consensus 230 ilytGD~~~~ 239 (428)
++|+||+.+.
T Consensus 185 ~lf~GD~~~~ 194 (317)
T 2zo4_A 185 VLLAGDALLE 194 (317)
T ss_dssp EEEEETSCCS
T ss_pred EEEECCEecC
Confidence 9999999874
No 51
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.13 E-value=1.1e-11 Score=115.90 Aligned_cols=122 Identities=15% Similarity=0.156 Sum_probs=87.5
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc-CCCcEEeCHHHHHHHHHhhccCCCc
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPSY 189 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (428)
.++..+++|||...... ...++.+......+|++||+||.|.||++|+..+. ...+||+++.+.+.+... +.. ..
T Consensus 44 ~~~~~iLiD~G~~~~~~--~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~~~~~v~~~~~~~~~~~~~-~~~-~~ 119 (232)
T 1a7t_A 44 NNHQAALLDTPINDAQT--EMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQRKGVQSYANQMTIDLAKEK-GLP-VP 119 (232)
T ss_dssp ETTEEEEESCCSSHHHH--HHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHH-TCC-CC
T ss_pred eCCEEEEEeCCCCHHHH--HHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHhCCCeEEEcHHHHHHHHhc-CCC-CC
Confidence 46678999999742100 00111111110257999999999999999998643 467999999988776543 221 23
Q ss_pred eEEcCCCcEEEECCEEEEEEE--cccCCCceEEEEEeeCCcEEEEeCCCCCC
Q 014242 190 IHPLELNTEHVIDGVKVTLLE--ANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 190 i~~v~~~~~~~i~~~~V~~~~--a~H~~Gs~~~~~~~~~g~~ilytGD~~~~ 239 (428)
...+..++.+.+++.+++++. .||++|+++++++ + .+++|+||+.+.
T Consensus 120 ~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~-~~~lf~GD~~~~ 168 (232)
T 1a7t_A 120 EHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLP--T-ENILFGGCMLKD 168 (232)
T ss_dssp SEEESSEEEEEETTEEEEEECCCCSSSTTCCEEEET--T-TTEEEEETTSCC
T ss_pred ceecCCCCEEEECCeEEEEEeCCCCCCCCCEEEEEC--C-CCEEEEcCcccc
Confidence 456788889999999999995 4999999999875 3 369999999774
No 52
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.11 E-value=1.6e-11 Score=127.28 Aligned_cols=122 Identities=14% Similarity=0.028 Sum_probs=87.4
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHhhccCCC
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCLLVNPS 188 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (428)
.++..++||+|.... ..++...... .+|++||+||.|.||++|+..+. ...+||+++.+...+...+. ...
T Consensus 25 ~~~~~ilID~g~~~~-----~~~~~l~~~~-~~i~~Il~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~ 97 (474)
T 3tp9_A 25 ETGEACVIDPARDVE-----PYLLTAKREG-LRIVAALETHIHADFVSGAREMADRAGAAICVSDEGPPEWKSEYV-KAY 97 (474)
T ss_dssp TTCEEEEESCCSCCH-----HHHHHHHHHT-CEEEEEECSSCCSSSCCCHHHHHHHHCCEEEEECCSCGGGCCGGG-GGS
T ss_pred CCCEEEEEcCCCChH-----HHHHHHHHcC-CeeEEEEcCcCchhhhCCHHHHHHHHCCcEEEcCcchhhhccccc-ccc
Confidence 356789999995321 1122222112 26999999999999999999643 46789988765433321111 112
Q ss_pred ceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCCc-----EEEEeCCCCCCc
Q 014242 189 YIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQ-----CYLHTGDFRASR 240 (428)
Q Consensus 189 ~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g~-----~ilytGD~~~~~ 240 (428)
..+.+..++.+.+++++|+++++ ||++|+++|++.. .+. +++||||+-+..
T Consensus 98 ~~~~~~~g~~~~~g~~~i~~i~tPGHt~g~~~~~~~~-~~~~~~~~~~lftGD~lf~~ 154 (474)
T 3tp9_A 98 PHRLLKDGDELHFGNVRIVVMHTPGHTPEHVSYLLYD-GKTSPDVPMALFSGDFVFVG 154 (474)
T ss_dssp SEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEEE-TTTEEEEEEEEEEETSEETT
T ss_pred cceECCCCCEEEECCEEEEEEECCCCCCCCEEEEEec-CCCCCCCceEEEeCCccccC
Confidence 34778899999999999999998 8999999999986 333 799999997543
No 53
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.10 E-value=2.4e-11 Score=118.15 Aligned_cols=123 Identities=14% Similarity=0.059 Sum_probs=84.0
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCcccc---cCCCcEEeCHHHHHHHHHh------
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMC------ 182 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~------ 182 (428)
++..++||||.........-.+.... ....+|++|++||.|.||++|++.+ .+..+||+++.+.+.+...
T Consensus 33 ~~~~iLID~G~~~~~~~~~~~l~~~~-~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~a~v~~~~~~~~~~~~~~~~~~~ 111 (303)
T 2vw8_A 33 EASWALVEGGISRDAELVWADLCRWV-ADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKSESAVRVV 111 (303)
T ss_dssp TTEEEEECCCCGGGHHHHHHHHHHHC-SCGGGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEEEHHHHHHTTCHHHHHHH
T ss_pred CCceEEEECCCCCcHHHHHHHHHHHh-cCcccceEEEeccCCccccCCHHHHHHhCCCCeEEECHHHHHHHhccchhhHH
Confidence 45689999998531000000011100 0225799999999999999999864 2478999999887543210
Q ss_pred --h--------cc-------CCCceEEcCCCcEEEECC-EEEEEEEc-ccCCCceEEEEEeeCCcEEEEeCCCCC
Q 014242 183 --L--------LV-------NPSYIHPLELNTEHVIDG-VKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRA 238 (428)
Q Consensus 183 --~--------~~-------~~~~i~~v~~~~~~~i~~-~~V~~~~a-~H~~Gs~~~~~~~~~g~~ilytGD~~~ 238 (428)
+ +. .......+..++.+.+++ .+++++++ ||++|+++++++ + .+++|+||+-.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~g~~~~~~~--~-~~~lf~GD~~~ 183 (303)
T 2vw8_A 112 ERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDV--R-RRRLFCGDALG 183 (303)
T ss_dssp HHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEET--T-TTEEEEETTTC
T ss_pred HHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecCCCeEEEEEECCCCCcccEEEEEC--C-CCEEEEcCccC
Confidence 0 00 012346778899999987 99999988 999999999885 2 36999999953
No 54
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.10 E-value=2.4e-11 Score=113.15 Aligned_cols=122 Identities=18% Similarity=0.145 Sum_probs=85.8
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc-CCCcEEeCHHHHHHHHHhhccCCCc
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPSY 189 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (428)
.++..+++|||...... .-.++.+......+|++|++||.|.||++|+..+. ...+||+++.+.+.+... +.. ..
T Consensus 48 ~~~~~iliD~G~~~~~~--~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~-~~~-~~ 123 (227)
T 1mqo_A 48 TSKGLVLVDSSWDDKLT--KELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKERGIKAHSTALTAELAKKN-GYE-EP 123 (227)
T ss_dssp ETTEEEEESCCSSHHHH--HHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHHTCEEECBHHHHHHHHHT-TCC-CC
T ss_pred eCCeEEEEECCCChHHH--HHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhCCcEEEeccchHHHHHhc-CCC-CC
Confidence 46778999999853100 00111111111268999999999999999998643 267899999888766532 221 23
Q ss_pred eEEcCCCcEEEECCEEEEEE-E-cccCCCceEEEEEeeCCcEEEEeCCCCCC
Q 014242 190 IHPLELNTEHVIDGVKVTLL-E-ANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 190 i~~v~~~~~~~i~~~~V~~~-~-a~H~~Gs~~~~~~~~~g~~ilytGD~~~~ 239 (428)
...+..++.+.+++++|+++ + .||++|+++++++ + .+++|+||+...
T Consensus 124 ~~~~~~~~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~-~~~lf~GD~~~~ 172 (227)
T 1mqo_A 124 LGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLP--Q-YNILVGGCLVKS 172 (227)
T ss_dssp CCCBCSEEEEEETTEEEEEECCCCSSSSSCCEEEET--T-TTEEEEETTSCC
T ss_pred ccccCCCCeeeECCEEEEEEecCCCCCCCCEEEEEC--C-CCEEEEeeeeec
Confidence 34566778899999999987 4 4999999999875 3 479999999764
No 55
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.10 E-value=1.5e-11 Score=118.81 Aligned_cols=124 Identities=14% Similarity=0.053 Sum_probs=83.5
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc------CCCcEEeCHHHHHHHHHhhc
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW------SHGPIYCSPLTARLVRMCLL 184 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~------~~~~Iy~s~~t~~~l~~~~~ 184 (428)
.++..+++|||............+.+.... .+|++||+||.|.||+||++.+. ...++|+++.+.... ....
T Consensus 39 ~~~~~ilID~G~~~~~~~~~~l~~~l~~~~-~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~~~~~~-~~~~ 116 (289)
T 4ad9_A 39 TGPRRILIDTGEPAIPEYISCLKQALTEFN-TAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQRE-EIIG 116 (289)
T ss_dssp SSSSEEEECCCSTTCHHHHHHHHHHHHHTT-CCEEEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCCSSCCC-CCBT
T ss_pred cCCceEEEeCCCCCChHHHHHHHHHHHHcC-CCceEEEEcCCCCcccccHHHHHHhhccCCCceEEecCCCcchh-hhcc
Confidence 356789999996431000001111111112 37999999999999999998632 356888875431100 0111
Q ss_pred cCCCceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCCcEEEEeCCCCCC
Q 014242 185 VNPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 185 ~~~~~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g~~ilytGD~~~~ 239 (428)
.....+..+..++.+.+++.+++++.+ ||++|+++++++ ++ +++|+||+-+.
T Consensus 117 ~~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~~~~~~~~~--~~-~~lftGD~~~~ 169 (289)
T 4ad9_A 117 NGEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLE--EE-NAIFSGDCILG 169 (289)
T ss_dssp TTTBCEEECCTTCEEEETTEEEEEEECCSSSTTCEEEEET--TT-TEEEEETSSCS
T ss_pred CCCCceEEcCCCCEEEeCCeEEEEEECCCCCCCCEEEEEc--CC-CEEEEecccCC
Confidence 123457889999999999999999998 999999999985 33 59999998553
No 56
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.10 E-value=5.4e-11 Score=113.94 Aligned_cols=110 Identities=21% Similarity=0.164 Sum_probs=79.8
Q ss_pred CceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc---CCCcEEeCHHHHHHHHHhhccCCCc
Q 014242 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW---SHGPIYCSPLTARLVRMCLLVNPSY 189 (428)
Q Consensus 113 ~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~---~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (428)
+..++||+|... ..++.+....+ +|++|++||.|.||++|+..+. +..+||++.... +..
T Consensus 23 ~~~vlID~G~~~------~i~~~l~~~g~-~i~~IllTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~----------~~~ 85 (260)
T 1qh5_A 23 KEAAIVDPVQPQ------KVVDAARKHGV-KLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRI----------GAL 85 (260)
T ss_dssp TEEEEESCSSHH------HHHHHHHHHTC-EEEEEECCCSSHHHHTTHHHHHHHSTTCEEEESCTTS----------TTC
T ss_pred CEEEEEcCCCHH------HHHHHHHHcCC-CccEEEeCCCCccccCCHHHHHHHCCCCEEEECcccC----------CCC
Confidence 578999999421 11222221122 5899999999999999998642 357899985321 123
Q ss_pred eEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEE-Eee-CCcEEEEeCCCCCC
Q 014242 190 IHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHF-RLQ-DGQCYLHTGDFRAS 239 (428)
Q Consensus 190 i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~-~~~-~g~~ilytGD~~~~ 239 (428)
...+..++.+.+++.+++++++ ||++|+++|++ +.. .+.+++||||+-+.
T Consensus 86 ~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~~~~~~~~~~~~lftGD~l~~ 138 (260)
T 1qh5_A 86 THKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFV 138 (260)
T ss_dssp SEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEECSSSSSCCEEEEETTEET
T ss_pred CEEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEeccCCCCCCEEEEcCcccc
Confidence 4567889999999999999998 99999999998 321 13479999999654
No 57
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.09 E-value=3.6e-11 Score=114.95 Aligned_cols=107 Identities=24% Similarity=0.179 Sum_probs=79.7
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc---CCCcEEeCHHHHHHHHHhhccCCC
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW---SHGPIYCSPLTARLVRMCLLVNPS 188 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~---~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (428)
++..++||+|.... .++.+....+ +|++|++||.|.||++|+..+. ...+||+++... +. .
T Consensus 28 ~~~~vlID~G~~~~------i~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~------~~---~ 91 (258)
T 2qed_A 28 EGRCVIVDPGEAAP------VLKAIAEHKW-MPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAETQ------DK---G 91 (258)
T ss_dssp TSEEEEECCSCHHH------HHHHHHHHTC-EEEEEECCSCCHHHHTTHHHHHHHCTTCEEEECGGGG------GG---T
T ss_pred CCcEEEEeCCCcHH------HHHHHHHcCC-CCCEEEeCCCCccccCCHHHHHHHCCCCEEEeccccc------CC---C
Confidence 45789999995321 1222221122 6899999999999999998642 347999997652 11 2
Q ss_pred ceEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCCcEEEEeCCCCCC
Q 014242 189 YIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 189 ~i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g~~ilytGD~~~~ 239 (428)
....+..|+.+.+++.+++++++ ||++|+++|+ . . +++||||+.+.
T Consensus 92 ~~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~-~--~--~~lftGD~l~~ 138 (258)
T 2qed_A 92 ATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYF-S--R--PYLFCGDTLFS 138 (258)
T ss_dssp CSEECCTTCEEEETTEEEEEEECCSSSTTCEEEE-E--T--TEEEEETTEET
T ss_pred CcEEeCCCCEEEECCcEEEEEECCCCCCCCeEEE-c--C--CEEEECCCCCC
Confidence 35678899999999999999998 9999999988 2 2 59999999764
No 58
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.09 E-value=1.7e-11 Score=127.07 Aligned_cols=121 Identities=16% Similarity=0.095 Sum_probs=86.6
Q ss_pred CCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHhhccCCCc
Q 014242 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCLLVNPSY 189 (428)
Q Consensus 112 ~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (428)
+++.++||+|.... ..++...... .+|++||+||.|.||++|+..+. ...+||+++.....+. +...+..
T Consensus 47 ~~~~vlID~g~~~~-----~~~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~~a~v~~~~~~~~~~~--~~~~~~~ 118 (466)
T 3r2u_A 47 TGEAMIIDPIRDLS-----SYIRVADEEG-LTITHAAETHIHADFASGIRDVAIKLNANIYVSGESDDTLG--YKNMPNH 118 (466)
T ss_dssp TCEEEEESCCSCCH-----HHHHHHHHHT-CEEEEEECSSCCSSSCCCHHHHHHHHCCEEEEECCSCTTTS--CCSCCTT
T ss_pred CCEEEEEcCCCCHH-----HHHHHHHHCC-CeeeEEEECCCChhhhccHHHHHHhhCCeEEECcchhhhhc--cccCCCC
Confidence 56789999995221 1122221112 25999999999999999998643 3679999876432221 1111225
Q ss_pred eEEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEee----CCcEEEEeCCCCCCc
Q 014242 190 IHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQ----DGQCYLHTGDFRASR 240 (428)
Q Consensus 190 i~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~----~g~~ilytGD~~~~~ 240 (428)
...+..++.+.+++++|+++++ ||++|+++|++... ++.+++||||+-+..
T Consensus 119 ~~~~~~g~~l~~g~~~l~vi~tPGHT~g~~~~~~~~~~~~~~~~~~lftGD~lf~~ 174 (466)
T 3r2u_A 119 THFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPMGLFSGDFIFVG 174 (466)
T ss_dssp CEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECGGGTCCSCCEEEEETTBCSS
T ss_pred CEEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEcCCCccCCCceEEEECCcccCC
Confidence 6788999999999999999998 89999999999862 233699999997753
No 59
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.08 E-value=6.5e-12 Score=118.26 Aligned_cols=124 Identities=13% Similarity=0.073 Sum_probs=82.5
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc-CCCcEEeCHHHHHHHHHhhccCCC-
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPS- 188 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~- 188 (428)
.++..+++|||...... ...++.+....-.+|++||+||.|.||++|++.+. ...+||+++.+.+.+.........
T Consensus 55 ~~~~~iLID~G~~~~~~--~~l~~~l~~~~~~~i~~vi~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~ 132 (243)
T 4hl2_A 55 DGGRVLVVDTAWTDDQT--AQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEGMVAAQH 132 (243)
T ss_dssp ETTEEEEESCCSSHHHH--HHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHTTCEEEEEHHHHHHGGGTTCCCCSE
T ss_pred ECCcEEEEECCCCCccH--HHHHHHHHHhhCCCeeEEEECCCCccccCCHHHHHhCCCeEEECHHHHHHHhccccccccc
Confidence 46679999999632100 01111111110136999999999999999999643 267999999988766532211111
Q ss_pred -----ceEEcCCCcEEEECCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCC
Q 014242 189 -----YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 189 -----~i~~v~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~ 239 (428)
....+..++.+.+++++|.....||++|+++++++ + .+++|+||+-+.
T Consensus 133 ~~~~~~~~~~~~g~~~~~g~~~v~~~~pGHt~g~~~~~~~--~-~~~lf~GD~~~~ 185 (243)
T 4hl2_A 133 SLTFAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGID--G-TDIAFGGCLIKD 185 (243)
T ss_dssp EECBCTTSBBCGGGSTTCTTEEEECCCSSSSTTCCEEEET--T-TTEEECTTTCCC
T ss_pred ccccccceEecCCCeEEECCEEEEeCCCCCCcCCEEEEEc--C-CCEEEEcceeee
Confidence 11235567778888999933345999999999986 3 369999999874
No 60
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.05 E-value=6.2e-11 Score=111.37 Aligned_cols=121 Identities=21% Similarity=0.149 Sum_probs=81.9
Q ss_pred CceEEEcCCCCCCCCCcceEecCCCcC-CCCCccEEEeCCCchhhhCCccccc-CCCcEEeCHHHHHHHHHhh-------
Q 014242 113 KKIVDRSCPFYKKIPGTPFTVDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCL------- 183 (428)
Q Consensus 113 ~~~~liDcG~~~~~~~~~~~iD~f~~~-~i~~id~v~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~------- 183 (428)
+..+++|||...... ...++.+... ....+ +||+||.|.||+||++.+. ...+||+++.+.+.+....
T Consensus 40 ~~~iLiD~G~~~~~~--~~l~~~l~~~~~~~~~-~vi~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 116 (246)
T 2fhx_A 40 GTVVIVSSPFENLGT--QTLMDWVAKTMKPKKV-VAINTHFHLDGTGGNEIYKKMGAETWSSDLTKQLRLEENKKDRIKA 116 (246)
T ss_dssp SEEEEESCCSSHHHH--HHHHHHHHHHHCCSEE-EEECCSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCHHHH--HHHHHHHHHhcCCCcE-EEEeCCCCccccChHHHHhhcCCEEEEcHHHHHHHHhcchhhhHHH
Confidence 357999999742100 0011111110 11334 7999999999999998643 3679999998877653211
Q ss_pred ----------------c-cCCCceEEcCCCcEEEECCEEEEEEE-c-ccCCCceEEEEEeeCCcEEEEeCCCCCC
Q 014242 184 ----------------L-VNPSYIHPLELNTEHVIDGVKVTLLE-A-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 184 ----------------~-~~~~~i~~v~~~~~~~i~~~~V~~~~-a-~H~~Gs~~~~~~~~~g~~ilytGD~~~~ 239 (428)
. ..+..+..++.++.+.+++.+++++. + ||++|+++++++ + .+++|+||+-+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~~~~~~pGHt~g~~~~~~~--~-~~~lf~GD~~~~ 188 (246)
T 2fhx_A 117 AEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSPDNVVVYFP--K-KKLLFGGCMIKP 188 (246)
T ss_dssp HHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEECCCCSSSTTCCEEEET--T-TTEEEEETTCCS
T ss_pred HhhhccccchhhhcccccCCCCceeecCCCCEEEECCEEEEEEeCCCCCCCCCEEEEEc--C-CCEEEECCEecc
Confidence 0 01223446788899999999999984 4 999999998875 3 369999999763
No 61
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.02 E-value=6e-11 Score=110.29 Aligned_cols=124 Identities=13% Similarity=0.024 Sum_probs=78.2
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc-CCCcEEeCHHHHHHHHHhhc-----
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLL----- 184 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~----- 184 (428)
.++..+++|||....... ...+........+|++|++||.|.||+||+..+. ...+||+++.+.+.+.....
T Consensus 33 ~~~~~iLiD~G~~~~~~~--~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 110 (233)
T 3q6v_A 33 GTDGITIIGATWTPETAE--TLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKTLGAKIVATQMTYDLQKSQWGSIVNF 110 (233)
T ss_dssp CSSCEEEESCCSSHHHHH--HHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHHHHHHHHH
T ss_pred eCCeEEEEECCCCHHHHH--HHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhhCCCEEEEcHHHHHHHHhhhHHHHHH
Confidence 456789999998531100 0111111111267999999999999999999754 57899999998876654211
Q ss_pred -------cC----CCceEEcCCCcEEEECCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCc
Q 014242 185 -------VN----PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240 (428)
Q Consensus 185 -------~~----~~~i~~v~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~ 240 (428)
.. ......++.+..+..+++++.....||++|++++++.. . +++| ||.-+..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~pGHt~g~~~~~~~~--~-~~lf-gD~~~~~ 173 (233)
T 3q6v_A 111 TRQGNNKYPNLEKSLPDTVFPGDFNLQNGSIRAMYLGEAHTKDGIFVYFPA--E-RVLY-GNCILKE 173 (233)
T ss_dssp HHHHSTTCCCCCCCCCSEEESSCEEETTTTEEEECCCCSSSSSCCEEEETT--T-TEEE-CTTTSCS
T ss_pred HhccccccccccccCCCEEeCCCeEEcCceEEEEECCCCCCcCcEEEEecc--C-CEEE-Cceeccc
Confidence 00 01122344443333345665554469999999998853 3 5888 9987643
No 62
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.00 E-value=1.6e-10 Score=110.26 Aligned_cols=110 Identities=18% Similarity=0.202 Sum_probs=81.3
Q ss_pred CceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHhhccCCCce
Q 014242 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCLLVNPSYI 190 (428)
Q Consensus 113 ~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~~~~~~~i 190 (428)
+..+++|+|.... .++.+.... .+|++|++||.|.||++|+..+. ...+||+++.+...+. ...
T Consensus 23 ~~~~lID~g~~~~------i~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~-------~~~ 88 (254)
T 1xm8_A 23 GTVGVVDPSEAEP------IIDSLKRSG-RNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMDKDRIP-------GID 88 (254)
T ss_dssp CCEEEECCSSHHH------HHHHHHHHT-CCCCEEECSSCCHHHHTTHHHHHHHHCCEEEEEGGGGGGST-------TEE
T ss_pred CEEEEEeCCCHHH------HHHHHHHcC-CCccEEEECCCCCcccccHHHHHHHcCCeEEEchhhhhcCC-------CCc
Confidence 4578999984221 112221112 36899999999999999998643 3678999986643221 134
Q ss_pred EEcCCCcEEEECCEEEEEEEc-ccCCCceEEEEEeeCCcEEEEeCCCCCC
Q 014242 191 HPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 191 ~~v~~~~~~~i~~~~V~~~~a-~H~~Gs~~~~~~~~~g~~ilytGD~~~~ 239 (428)
..+..|+.+.+++.+++++++ ||++|+++|+++. .+++||||+-+.
T Consensus 89 ~~~~~g~~~~lg~~~~~vi~tPGHt~g~~~~~~~~---~~~lftGD~l~~ 135 (254)
T 1xm8_A 89 MALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPG---SRAIFTGDTMFS 135 (254)
T ss_dssp EEECTTCEEEETTEEEEEEECCSSSSSCEEEEEGG---GTEEEEETTEET
T ss_pred eeeCCCCEEEECCEEEEEEECCCCCCCcEEEEECC---CCEEEEcCcccc
Confidence 668889999999999999997 9999999999853 369999999764
No 63
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=98.98 E-value=8e-11 Score=109.85 Aligned_cols=120 Identities=20% Similarity=0.204 Sum_probs=80.4
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc-CCCcEEeCHHHHHHHHHhhccCCCc
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPSY 189 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (428)
.++..+++|+|...... ...++.+.... .+|++|++||.|.||++|+..+. ...+||+++.+.+.+.......+.
T Consensus 40 ~~~~~iliD~g~~~~~~--~~~~~~l~~~g-~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~- 115 (228)
T 1jjt_A 40 VNAEAYLIDTPFTAKDT--EKLVTWFVERG-YKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELTNELLKKDGKVQAT- 115 (228)
T ss_dssp ETTEEEEESCCSSHHHH--HHHHHHHHTTT-CEEEEEECSSSSHHHHTTHHHHHHTTCCEEEEHHHHHHHHHTTCCCCS-
T ss_pred ECCcEEEEeCCCChhhH--HHHHHHHHHcC-CCeeEEEeCCCChhhhccHHHHHhCCCEEEEChHHHHHHHhcCCcCcc-
Confidence 45678999999742100 01112222112 27899999999999999998643 367999999988877543211111
Q ss_pred eEEcCCCcEEEECCEEEEEE-Ec-ccCCCceEEEEEeeCCcEEEEeCCCCCC
Q 014242 190 IHPLELNTEHVIDGVKVTLL-EA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 190 i~~v~~~~~~~i~~~~V~~~-~a-~H~~Gs~~~~~~~~~g~~ilytGD~~~~ 239 (428)
..+ .++.+.+++.+++++ ++ ||++|+++++++ + .+++|+||+.+.
T Consensus 116 -~~~-~g~~~~l~~~~i~~~~~~pGHt~g~~~~~~~--~-~~~lf~GD~~~~ 162 (228)
T 1jjt_A 116 -NSF-SGVNYWLVKNKIEVFYPGPGHTPDNVVVWLP--E-RKILFGGCFIKP 162 (228)
T ss_dssp -EEE-CSSCCEEETTTEEEECCCCSSSTTCCEEEET--T-TTEEEEETTCCT
T ss_pred -ccc-cCcceEecCceEEEEecCCCCCCCcEEEEEC--C-CcEEEEeccccc
Confidence 223 255666777777776 54 999999999875 3 369999999763
No 64
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=98.97 E-value=1.1e-10 Score=108.15 Aligned_cols=120 Identities=15% Similarity=0.077 Sum_probs=77.0
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc-CCCcEEeCHHHHHHHHHhhc-----
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLL----- 184 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~----- 184 (428)
.++..+++|+|...... +...+.+......+|++|++||.|.||+||+..+. ++.+||+++.+...+.....
T Consensus 30 ~~~~~iLiD~G~~~~~~--~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~ 107 (227)
T 3iog_A 30 GAKGVTVVGATWTPDTA--RELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKSIGAKVVSTRQTRDLMKSDWAEIVAF 107 (227)
T ss_dssp CSSCEEEESCCSSHHHH--HHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHHHHHHHHH
T ss_pred eCCeEEEEECCCChHHH--HHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhhCCCeEEECHHHHHHHHHhhHHHHHH
Confidence 45678999999732110 01111111112367999999999999999999743 57899999998876653211
Q ss_pred ----cC-----C--CceEEcCCCcEEEECCEEEEEEE--cccCCCceEEEEEeeCCcEEEEeCCCCC
Q 014242 185 ----VN-----P--SYIHPLELNTEHVIDGVKVTLLE--ANHCPGAALIHFRLQDGQCYLHTGDFRA 238 (428)
Q Consensus 185 ----~~-----~--~~i~~v~~~~~~~i~~~~V~~~~--a~H~~Gs~~~~~~~~~g~~ilytGD~~~ 238 (428)
.. . .....+ +..+.+++.+++++. .||++|+++++++. + +++| ||.-+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~pGHt~g~~~~~~~~--~-~~lf-gd~l~ 168 (227)
T 3iog_A 108 TRKGLPEYPDLPLVLPNVVH--DGDFTLQEGKVRAFYAGPAHTPDGIFVYFPD--E-QVLY-GGCIL 168 (227)
T ss_dssp HHHHCTTSCCCCCCCCSEEE--SSCEEETTTTEEEECCCCSSSSSCCEEEETT--T-TEEE-CGGGS
T ss_pred hhcCCCCCCCccccCCCEee--cCeEEEcCcEEEEEecCCCCCCCcEEEEecC--C-CEEE-ccccc
Confidence 10 0 011112 234777766677776 49999999998863 3 5888 88654
No 65
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=98.87 E-value=2.8e-09 Score=101.82 Aligned_cols=122 Identities=19% Similarity=0.140 Sum_probs=83.6
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcC-CCCCccEEEeCCCchhhhCCccccc-CCCcEEeCHHHHHHHHHhhccCCC
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPS 188 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~-~i~~id~v~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (428)
.++..+++|+|...... ...++.+... . .+|++|++||.|.||++|+..+. .+.+||+++.+.+.+.........
T Consensus 75 ~~~~~iLID~G~~~~~~--~~l~~~l~~~~g-~~i~~VilTH~H~DH~gg~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~ 151 (265)
T 2y8b_A 75 DADELLLIDTAWGAKNT--VALLAEIEKQIG-LPVTRSISTHFHDDRVGGVDVLRAAGVATYTSPLTRQLAEAAGNEVPA 151 (265)
T ss_dssp ETTEEEEESCCSSHHHH--HHHHHHHHHHTC-SCEEEEECSSSSHHHHTTHHHHHHTTCEEEECHHHHHHHHHTTCCCCS
T ss_pred ECCeEEEEeCCCCHHHH--HHHHHHHHHhcC-CCeEEEEeCCCChhhcCCHHHHhhCCCeEEECHHHHHHHHhccccccc
Confidence 46778999999742100 0011111111 2 36999999999999999998642 467999999998877654321111
Q ss_pred ceEEc----CCCcEEEECCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCc
Q 014242 189 YIHPL----ELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240 (428)
Q Consensus 189 ~i~~v----~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~ 240 (428)
.++ +.++.+.++++++.....||++|+++++++ + .+++|+||+-...
T Consensus 152 --~~~~~~~~~~~~~~~g~~~v~~~~pGHt~g~~~~~~~--~-~~~lf~GD~~~~~ 202 (265)
T 2y8b_A 152 --HSLKALSSSGDVVRFGPVEVFYPGAAHSGDNLVVYVP--A-VRVLFGGCAVHEA 202 (265)
T ss_dssp --EECSSCSSTTEEEEETTEEEEECCSSSSTTCCEEEET--T-TTEEEEETTSCCT
T ss_pred --ccccccCCCCcEEeecCEEEEecCCCCCCCCEEEEec--C-CCEEEEccccccC
Confidence 122 567778888888864456999999999875 3 3699999998753
No 66
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.79 E-value=4.2e-10 Score=107.97 Aligned_cols=125 Identities=13% Similarity=0.061 Sum_probs=79.6
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc-CCCcEEeCHHHHHHHHHhhccCCCc
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPSY 189 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (428)
.+++.++||+|...... .-.++..+...-.+|++|++||.|.||++|+..+. ...++|+++.+.+++..........
T Consensus 82 ~~~~~ilIDtg~~~~~~--~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~ 159 (270)
T 4eyb_A 82 DGGRVLVVDTAWTDDQT--AQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEGMVAAQH 159 (270)
T ss_dssp ETTEEEEESCCSSHHHH--HHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHTTCEEEEEHHHHHHGGGGTCCCCSE
T ss_pred ECCEEEEEeCCCCHHHH--HHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHCCCeEEECHHHHHHHHhcCcccccc
Confidence 57789999999744211 11223222211257999999999999999998643 4689999998887765432211111
Q ss_pred eE------EcCCCcEEEECCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCc
Q 014242 190 IH------PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240 (428)
Q Consensus 190 i~------~v~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~ 240 (428)
.. .++.+..+..+++.+.....||++|++++++.. .+++|+||+-+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~pgHT~g~~~~~~~~---~~vLfsGD~l~~~ 213 (270)
T 4eyb_A 160 SLTFAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGIDG---TDIAFGGCLIKDS 213 (270)
T ss_dssp EECBCTTSBBCGGGSTTCTTEEEECCCSSSSSSCCEEEETT---SSEEECTTTCCCT
T ss_pred ccCCCCceeecCceeeecCceeEEecccccCCCCEEEEecC---CcEEEEeCeecCC
Confidence 11 122223333455555444469999999988763 3699999987643
No 67
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.76 E-value=7.5e-09 Score=111.51 Aligned_cols=124 Identities=13% Similarity=0.039 Sum_probs=83.1
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCc-CCCCCccEEEeCCCchhhhCCccccc-------CCCcEEeCHHHHHHHH--
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRY-GSIKGCSAYFLTHFHYDHYGGLGKRW-------SHGPIYCSPLTARLVR-- 180 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~-~~i~~id~v~iTH~H~DHiggL~~~~-------~~~~Iy~s~~t~~~l~-- 180 (428)
.++..++||+|....... ..++.+.. ....+|++||+||.|.||+||+..+. ...+||+++.+.+.+.
T Consensus 130 ~~~g~iLIDtG~~~~~a~--~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~~~~~~~~~e 207 (658)
T 2cfu_A 130 GDSGWIVVDTLTTPATAR--AAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAAIKE 207 (658)
T ss_dssp CSSSEEEECCCSSHHHHH--HHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTHHHHHC--
T ss_pred ECCEEEEEECCCCHHHHH--HHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEchhHHHHHhhh
Confidence 456789999998542100 01111110 01268999999999999999998653 4679999987654321
Q ss_pred -------------Hhhcc--CC----------------------CceEEc-CCCcEEEECCEEEEEEEc-cc-CCCceEE
Q 014242 181 -------------MCLLV--NP----------------------SYIHPL-ELNTEHVIDGVKVTLLEA-NH-CPGAALI 220 (428)
Q Consensus 181 -------------~~~~~--~~----------------------~~i~~v-~~~~~~~i~~~~V~~~~a-~H-~~Gs~~~ 220 (428)
..++. +. .....+ +.++.+.+++.+++++++ || ++|++++
T Consensus 208 ~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~~dG~~l~lgg~~l~vi~tPGHhTpg~i~~ 287 (658)
T 2cfu_A 208 NVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTPGTESPAEMNI 287 (658)
T ss_dssp -CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEETTEEEEEEECTTSSSSSBEEE
T ss_pred hhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEecCceEEEECCEEEEEEeCCCCCCCCcEEE
Confidence 01111 00 011334 467888999999999998 88 9999999
Q ss_pred EEEeeCCcEEEEeCCCCCC
Q 014242 221 HFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 221 ~~~~~~g~~ilytGD~~~~ 239 (428)
++. + .+++|+||.-+.
T Consensus 288 ~~p--~-~~vLftGD~v~~ 303 (658)
T 2cfu_A 288 WLP--R-QKALLMAENVVG 303 (658)
T ss_dssp EET--T-TTEEECTTTSCS
T ss_pred EEC--C-CCEEEEeccccc
Confidence 885 3 369999998764
No 68
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=97.92 E-value=1.1e-08 Score=109.97 Aligned_cols=124 Identities=16% Similarity=0.103 Sum_probs=80.7
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcC-CCCCccEEEeCCCchhhhCCccccc-------CCCcEEeCHHHHHH--HH
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKRW-------SHGPIYCSPLTARL--VR 180 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~-~i~~id~v~iTH~H~DHiggL~~~~-------~~~~Iy~s~~t~~~--l~ 180 (428)
.++..++||+|....... ..++.+... ...+|++||+||.|.||+||+..+. ...+||+++.+.+. ..
T Consensus 140 ~~~~~iLIDtG~~~~~a~--~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~~~~e~~~~e 217 (668)
T 2yhe_A 140 GDSGLVLIDTLTTAETAR--AALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPSGFMEHAVSE 217 (668)
Confidence 356789999998543211 122222211 2357999999999999999998653 46789998875221 00
Q ss_pred -------------Hhhc--cCC-----------------C-------ceEEcCCCcEEEECCEEEEEEEc-c-cCCCceE
Q 014242 181 -------------MCLL--VNP-----------------S-------YIHPLELNTEHVIDGVKVTLLEA-N-HCPGAAL 219 (428)
Q Consensus 181 -------------~~~~--~~~-----------------~-------~i~~v~~~~~~~i~~~~V~~~~a-~-H~~Gs~~ 219 (428)
..++ .+. . ....++.++.+.+++.+++++.+ | |++|+++
T Consensus 218 ~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~dg~~l~lgg~~l~vi~tPG~Htpg~i~ 297 (668)
T 2yhe_A 218 NILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLVAPNVLIEKPYERHTVDGVELEFQLTLGSEAPSDMN 297 (668)
Confidence 0111 000 0 01112356778889999999988 6 9999999
Q ss_pred EEEEeeCCcEEEEeCCCCCC
Q 014242 220 IHFRLQDGQCYLHTGDFRAS 239 (428)
Q Consensus 220 ~~~~~~~g~~ilytGD~~~~ 239 (428)
+++.. .+++|+||.-+.
T Consensus 298 ~~~p~---~~vLftGD~~~~ 314 (668)
T 2yhe_A 298 IYLPQ---FKVLNTADNAPP 314 (668)
Confidence 98863 369999998653
No 69
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=98.45 E-value=1.4e-08 Score=92.81 Aligned_cols=110 Identities=17% Similarity=0.097 Sum_probs=74.0
Q ss_pred cCCceEEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCccccc--CCCcEEeCHHHHHHHHHhhccCCC
Q 014242 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCLLVNPS 188 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (428)
.++..+++|+|.... -.++.+.. ..+|++|++||. ||++|+..+. +..+||+++.+.+.+. ..
T Consensus 31 ~~~~~iliD~g~~~~-----~~~~~l~~--~g~i~~ii~TH~--DH~gg~~~~~~~~~a~v~~~~~~~~~~~----~~-- 95 (201)
T 2p97_A 31 RPEGNILIDPVALSN-----HDWKHLES--LGGVVWIVLTNS--DHVRSAKEIADQTYTKIAGPVAEKENFP----IY-- 95 (201)
T ss_dssp CTTCCEEESCCCCCH-----HHHHHHHH--TTCCSEEECSSG--GGCTTHHHHHHHSCCEEEEEGGGTTSCS----SC--
T ss_pred eCCeeEEEECCCCcH-----HHHHHHHh--cCCCCEEEECCc--hhhhhHHHHHHhcCCEEEEcHhHhhhhc----cc--
Confidence 346789999994221 01122211 137999999999 9999998642 3589999987654321 11
Q ss_pred ceEEcCCCcEEEECCEEEEEEEcccCCCceEEEEEeeCCcEEEEeCCCCCCc
Q 014242 189 YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240 (428)
Q Consensus 189 ~i~~v~~~~~~~i~~~~V~~~~a~H~~Gs~~~~~~~~~g~~ilytGD~~~~~ 240 (428)
....+..++.+. .++++...|+||++|+++++++ + +++|+||+.+..
T Consensus 96 ~~~~~~~g~~~~-~~~~~~~~p~gHt~g~~~~~~~--~--~~lf~GD~~~~~ 142 (201)
T 2p97_A 96 CDRWLSDGDELV-PGLKVMELQGSKTPGELALLLE--E--TTLITGDLVRAY 142 (201)
T ss_dssp CSEEECTTCBSS-TTEEEEEECSSSSTTEEEEEET--T--TEEEECSSEEBS
T ss_pred CceecCCCCEEc-ceEEEEECCCCCCCCcEEEEEc--C--CEEEECcccccc
Confidence 134566666543 2677777777999999998875 3 699999997643
No 70
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=98.29 E-value=7.9e-07 Score=85.79 Aligned_cols=60 Identities=22% Similarity=0.192 Sum_probs=42.2
Q ss_pred cCCceEEEcCCCCCCCCC--cceEecCCCcCCCCCccEEEeCCCchhhhCCccccc---CCCcEEeCHHHH
Q 014242 111 HLKKIVDRSCPFYKKIPG--TPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW---SHGPIYCSPLTA 176 (428)
Q Consensus 111 ~~~~~~liDcG~~~~~~~--~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~---~~~~Iy~s~~t~ 176 (428)
.++..+++|||....... ....+ ...+|++||+||.|.||++|++.+. +..+||+++.+.
T Consensus 40 ~~~~~iLiD~G~~~~~~~~l~~~g~------~~~~i~~v~lTH~H~DH~ggl~~~~~~~~~~~v~~~~~~~ 104 (284)
T 2p4z_A 40 KGNKEIVVDTGQSENFIKNCGLMGI------DVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKEIL 104 (284)
T ss_dssp ETTEEEEECCCSSTHHHHHHHHTTC------CGGGCCEEECCCSCHHHHTTHHHHHHHCTTCEEEEEGGGG
T ss_pred ECCeEEEEeCCCCHHHHHHHHHcCC------ChhhCCEEEECCCCchhhccHHHHHHHcCCCceecCHHHH
Confidence 456789999998532100 00111 2257999999999999999998642 467999988764
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=97.18 E-value=9.1e-05 Score=70.86 Aligned_cols=54 Identities=22% Similarity=0.114 Sum_probs=37.6
Q ss_pred EEEcCCCCCCCCCcceEecCCCcCCCCCccEEEeCCCchhhhCCcccccCCCcEEeCHHHH
Q 014242 116 VDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176 (428)
Q Consensus 116 ~liDcG~~~~~~~~~~~iD~f~~~~i~~id~v~iTH~H~DHiggL~~~~~~~~Iy~s~~t~ 176 (428)
+|+|+|.... .+.......+...++|++||.|.||+||++.+ ++.+||+++...
T Consensus 40 iLiD~G~~~~------l~~~l~~~gi~~~~~IvlTH~H~DH~ggl~~l-~~~~v~~~~~~~ 93 (267)
T 3h3e_A 40 VLFDTGKSDV------FLKNARKLGIDLPKDVLISHGHYDHAGGLLYL-SGKRVWLRKEAL 93 (267)
T ss_dssp EEECCCSSSH------HHHHHHHTTCCCCSEEECSCSCHHHHGGGGGC-CSCEEEEEGGGG
T ss_pred EEEECCCcHH------HHHHHHHCCcCcCCEEEECCCChhhhCCHHHh-cCCEEEECHHHH
Confidence 8999998531 11111111211119999999999999999988 778999987653
Done!