BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014245
(428 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/304 (44%), Positives = 184/304 (60%), Gaps = 17/304 (5%)
Query: 70 SNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ 129
LK F++ EL+ A+ NFS ++G GGFG VYKG + + VAVK+L Q
Sbjct: 23 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADG------TLVAVKRLKEERXQ 76
Query: 130 GHK-EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKS 186
G + ++ TEV + + H+NL++L G+C ER LLVY YM NGSV L P+S
Sbjct: 77 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANGSVASCLRERPES 132
Query: 187 ETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG 246
+ L W R +IA +ARGLAYLH+ D +II RD K++NILLDE++ A + DFGLA+L
Sbjct: 133 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192
Query: 247 PSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSE 306
+ HV AV GT+G+ APEY+ TG+ + ++DV+ YGV L ELITG+R D R ++
Sbjct: 193 DYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 251
Query: 307 QK--LLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
LL WVK L + K+ +VD L+G Y V +L VA LC + RPKMSEV
Sbjct: 252 DDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
Query: 365 LEMV 368
+ M+
Sbjct: 311 VRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 217 bits (553), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 182/304 (59%), Gaps = 17/304 (5%)
Query: 70 SNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ 129
LK F++ EL+ A+ NF ++G GGFG VYKG + + VAVK+L Q
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADG------XLVAVKRLKEERTQ 68
Query: 130 GHK-EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKS 186
G + ++ TEV + + H+NL++L G+C ER LLVY YM NGSV L P+S
Sbjct: 69 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANGSVASCLRERPES 124
Query: 187 ETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG 246
+ L W R +IA +ARGLAYLH+ D +II RD K++NILLDE++ A + DFGLA+L
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 247 PSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSE 306
+ HV AV G +G+ APEY+ TG+ + ++DV+ YGV L ELITG+R D R ++
Sbjct: 185 DYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 243
Query: 307 QK--LLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
LL WVK L + K+ +VD L+G Y V +L VA LC + RPKMSEV
Sbjct: 244 DDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
Query: 365 LEMV 368
+ M+
Sbjct: 303 VRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 165/291 (56%), Gaps = 16/291 (5%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMT 136
+ +L+ AT NF +IG G FG VYKG++++ +VA+K+ QG +E+ T
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG------AKVALKRRTPESSQGIEEFET 84
Query: 137 EVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL--SPKSETILTWAM 194
E+ L H +LV L+G+C DER + +L+Y+YM NG++ ++L S ++W
Sbjct: 85 EIETLSFCRHPHLVSLIGFC---DERN-EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
RL+I AARGL YLH II RD KS NILLDE + K++DFG+++ G G TH+
Sbjct: 141 RLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHL 197
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 314
V GT+GY PEY GRL +SDV+S+GV L+E++ R I ++ PR L +W
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 315 PYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
++ Q QIVDP L K + K A CL ++ RP M +VL
Sbjct: 258 ESHNNG-QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 164/291 (56%), Gaps = 16/291 (5%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMT 136
+ +L+ AT NF +IG G FG VYKG++++ +VA+K+ QG +E+ T
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG------AKVALKRRTPESSQGIEEFET 84
Query: 137 EVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL--SPKSETILTWAM 194
E+ L H +LV L+G+C DER + +L+Y+YM NG++ ++L S ++W
Sbjct: 85 EIETLSFCRHPHLVSLIGFC---DERN-EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
RL+I AARGL YLH II RD KS NILLDE + K++DFG+++ G TH+
Sbjct: 141 RLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 314
V GT+GY PEY GRL +SDV+S+GV L+E++ R I ++ PR L +W
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 315 PYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
++ Q QIVDP L K + K A CL ++ RP M +VL
Sbjct: 258 ESHNNG-QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 172/319 (53%), Gaps = 29/319 (9%)
Query: 64 SMSQRPSNLKEFTIAELKSATKNFSRSVV------IGEGGFGCVYKGLIKNSEDPSQK-- 115
S+ + F+ ELK+ T NF + +GEGGFG VYKG + N+ +K
Sbjct: 4 SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLA 63
Query: 116 --VEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYM 173
V++ ++L ++ Q E+ + +H+NLV+L+G+ +D D+ LVY YM
Sbjct: 64 AMVDITTEELKQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYM 112
Query: 174 PNGSVDQYLSPKSETI-LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 232
PNGS+ LS T L+W MR KIAQ AA G+ +LHE I RD KS+NILLDE
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEA 169
Query: 233 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI 292
+ AK+SDFGLAR T + + +VGT Y APE ++ G + +SD++S+GV L E+I
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEII 228
Query: 293 TGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLV 352
TG +D + R Q LL + + K +D ++ S V + VA+ CL
Sbjct: 229 TGLPAVDEH--REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLH 285
Query: 353 KNARTRPKMSEVLEMVNKI 371
+ RP + +V +++ ++
Sbjct: 286 EKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 171/319 (53%), Gaps = 29/319 (9%)
Query: 64 SMSQRPSNLKEFTIAELKSATKNFSRSVV------IGEGGFGCVYKGLIKNSEDPSQK-- 115
S+ + F+ ELK+ T NF + +GEGGFG VYKG + N+ +K
Sbjct: 4 SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLA 63
Query: 116 --VEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYM 173
V++ ++L ++ Q E+ + +H+NLV+L+G+ +D D+ LVY YM
Sbjct: 64 AMVDITTEELKQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYM 112
Query: 174 PNGSVDQYLSPKSETI-LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 232
PNGS+ LS T L+W MR KIAQ AA G+ +LHE I RD KS+NILLDE
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEA 169
Query: 233 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI 292
+ AK+SDFGLAR T + +VGT Y APE ++ G + +SD++S+GV L E+I
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEII 228
Query: 293 TGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLV 352
TG +D + R Q LL + + K +D ++ S V + VA+ CL
Sbjct: 229 TGLPAVDEH--REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLH 285
Query: 353 KNARTRPKMSEVLEMVNKI 371
+ RP + +V +++ ++
Sbjct: 286 EKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 170/310 (54%), Gaps = 33/310 (10%)
Query: 75 FTIAELKSATKNFSRSVV------IGEGGFGCVYKGLIKNSEDPSQK----VEVAVKQLG 124
F+ ELK+ T NF + +GEGGFG VYKG + N+ +K V++ ++L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL- 67
Query: 125 RRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP 184
+++ E+ + +H+NLV+L+G+ +D D+ LVY YMPNGS+ LS
Sbjct: 68 ------KQQFDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRLSC 117
Query: 185 KSETI-LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA 243
T L+W MR KIAQ AA G+ +LHE I RD KS+NILLDE + AK+SDFGLA
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 174
Query: 244 RLGPSEGFTH--VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRN 301
R SE F + +VGT Y APE ++ G + +SD++S+GV L E+ITG +D +
Sbjct: 175 R--ASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH 231
Query: 302 RPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKM 361
R Q LL + + K +D ++ S V + VA+ CL + RP +
Sbjct: 232 --REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDI 288
Query: 362 SEVLEMVNKI 371
+V +++ ++
Sbjct: 289 KKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 165/309 (53%), Gaps = 33/309 (10%)
Query: 75 FTIAELKSATKNFSRSVV------IGEGGFGCVYKGLIKNSEDPSQK----VEVAVKQLG 124
F+ ELK+ T NF + GEGGFG VYKG + N+ +K V++ ++L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL- 64
Query: 125 RRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP 184
+++ E+ +H+NLV+L+G+ +D D+ LVY Y PNGS+ LS
Sbjct: 65 ------KQQFDQEIKVXAKCQHENLVELLGFSSDGDDL----CLVYVYXPNGSLLDRLSC 114
Query: 185 KSETI-LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA 243
T L+W R KIAQ AA G+ +LHE I RD KS+NILLDE + AK+SDFGLA
Sbjct: 115 LDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 171
Query: 244 RLGPSEGFTH--VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRN 301
R SE F + +VGT Y APE ++ G + +SD++S+GV L E+ITG +D +
Sbjct: 172 R--ASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH 228
Query: 302 RPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKM 361
R Q LL + + K +D + S + + S VA+ CL + RP +
Sbjct: 229 --REPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYS-VASQCLHEKKNKRPDI 285
Query: 362 SEVLEMVNK 370
+V +++ +
Sbjct: 286 KKVQQLLQE 294
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-GRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG FG V + D + ++ VAVK L G Q W E++ L + H++++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEM-VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G C D E+ +Q LV EY+P GS+ YL S + A L AQ G+AYLH
Sbjct: 81 YKGCCEDQGEKSLQ--LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHS 135
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG--TMGYAAPEY 269
I R+ + N+LLD K+ DFGLA+ P EG + G + + APE
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPEC 191
Query: 270 VQTGRLAARSDVWSYGVFLYELIT 293
++ + SDVWS+GV LYEL+T
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 122/234 (52%), Gaps = 26/234 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGHKEWMTEVNFLGIVE 145
R V+G G FG VYKG I E + K+ VA+K L G + + E+M E + ++
Sbjct: 40 LKRVKVLGSGAFGTVYKG-IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
H +LV+L+G C IQ LV + MP+G + +Y+ S+ +L W +++
Sbjct: 99 HPHLVRLLGVCLSPT---IQ--LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI---- 149
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 260
A+G+ YL E +++ RD + N+L+ + K++DFGLARL EG A G
Sbjct: 150 --AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL--LEGDEKEYNADGG 202
Query: 261 TMG--YAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQ 311
M + A E + + +SDVWSYGV ++EL+T G +P D R LL+
Sbjct: 203 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 256
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-GRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG FG V + D + ++ VAVK L G Q W E++ L + H++++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEM-VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G C D E+ +Q LV EY+P GS+ YL S + A L AQ G+AYLH
Sbjct: 81 YKGCCEDQGEKSLQ--LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHA 135
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG--TMGYAAPEY 269
I R+ + N+LLD K+ DFGLA+ P EG + G + + APE
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPEC 191
Query: 270 VQTGRLAARSDVWSYGVFLYELIT 293
++ + SDVWS+GV LYEL+T
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 122/234 (52%), Gaps = 26/234 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGHKEWMTEVNFLGIVE 145
R V+G G FG VYKG I E + K+ VA+K L G + + E+M E + ++
Sbjct: 17 LKRVKVLGSGAFGTVYKG-IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
H +LV+L+G C IQ LV + MP+G + +Y+ S+ +L W +++
Sbjct: 76 HPHLVRLLGVCLSPT---IQ--LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI---- 126
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 260
A+G+ YL E +++ RD + N+L+ + K++DFGLARL EG A G
Sbjct: 127 --AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL--LEGDEKEYNADGG 179
Query: 261 TM--GYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQ 311
M + A E + + +SDVWSYGV ++EL+T G +P D R LL+
Sbjct: 180 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 233
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 34/283 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG G FG V+ G N K +VA+K + R G ++++ E + + H LV+L
Sbjct: 15 IGSGQFGLVHLGYWLN------KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C + LV+E+M +G + YL + + L + D G+AYL E
Sbjct: 68 YGVCLEQ----APICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 123 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 178
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 228
Query: 332 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 374
+ + + N C + RP S +L + +I ++
Sbjct: 229 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 34/283 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG G FG V+ G N K +VA+K + R G ++++ E + + H LV+L
Sbjct: 18 IGSGQFGLVHLGYWLN------KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 70
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C + LV+E+M +G + YL + + L + D G+AYL E
Sbjct: 71 YGVCLEQ----APICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 126 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 181
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 231
Query: 332 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 374
+ + + N C + RP S +L + +I ++
Sbjct: 232 ASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 34/283 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG G FG V+ G N K +VA+K + R G ++++ E + + H LV+L
Sbjct: 13 IGSGQFGLVHLGYWLN------KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C + LV+E+M +G + YL + + L + D G+AYL E
Sbjct: 66 YGVCLEQ----APICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 121 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 176
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 226
Query: 332 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 374
+ + + N C + RP S +L + +I ++
Sbjct: 227 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 34/280 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG G FG V+ G N K +VA+K + R G ++++ E + + H LV+L
Sbjct: 15 IGSGQFGLVHLGYWLN------KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C + LV+E+M +G + YL + + L + D G+AYL E
Sbjct: 68 YGVCLEQ----APICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 123 ---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 178
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 228
Query: 332 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKI 371
+ + + N C + RP S +L + I
Sbjct: 229 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG FG V + D + ++ VAVK L G Q W E+ L + H+++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEM-VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G C D E+ +Q LV EY+P GS+ YL P+ + A L AQ G+AYLH
Sbjct: 76 YKGCCEDQGEKSVQ--LVMEYVPLGSLRDYL-PRH--CVGLAQLLLFAQQICEGMAYLHA 130
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT--MGYAAPEY 269
I R + N+LLD K+ DFGLA+ P EG + G + + APE
Sbjct: 131 Q---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPEC 186
Query: 270 VQTGRLAARSDVWSYGVFLYELIT 293
++ + SDVWS+GV LYEL+T
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG FG V + D + ++ VAVK L G Q W E+ L + H+++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEM-VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G C D E+ +Q LV EY+P GS+ YL P+ + A L AQ G+AYLH
Sbjct: 75 YKGCCEDQGEKSVQ--LVMEYVPLGSLRDYL-PRH--CVGLAQLLLFAQQICEGMAYLHA 129
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG--TMGYAAPEY 269
I R + N+LLD K+ DFGLA+ P EG + G + + APE
Sbjct: 130 Q---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPEC 185
Query: 270 VQTGRLAARSDVWSYGVFLYELIT 293
++ + SDVWS+GV LYEL+T
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 34/283 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG G FG V+ G N K +VA+K + R G ++++ E + + H LV+L
Sbjct: 16 IGSGQFGLVHLGYWLN------KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 68
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C + LV E+M +G + YL + + L + D G+AYL E
Sbjct: 69 YGVCLEQ----APICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 124 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 179
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 229
Query: 332 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 374
+ + + N C + RP S +L + +I ++
Sbjct: 230 ASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 44/225 (19%)
Query: 92 VIGEGGFGCVYKGLIKNSE--------DPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGI 143
+IG GGFG VY+ E DP + + ++ + + E +
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQ-----------EAKLFAM 62
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK---SETILTWAMRLKIAQ 200
++H N++ L G C + LV E+ G +++ LS K + ++ WA+++
Sbjct: 63 LKHPNIIALRGVCLKEP----NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI---- 114
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN--------AKLSDFGLARLGPSEGFT 252
ARG+ YLH+ II RD KSSNIL+ ++ K++DFGLAR E
Sbjct: 115 --ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHR 168
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ G + APE ++ + SDVWSYGV L+EL+TG P
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 26 LGAGQFGEVWMGYYNGH------TKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 78
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 79 YAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL +T A + + APE +
Sbjct: 134 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINY 189
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 27 LGAGQFGEVWMGYYNGH------TKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 80 YAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL +T A + + APE +
Sbjct: 135 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINY 190
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 16 LGAGQFGEVWMGYYNG------HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 68
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 69 YAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL +T A + + APE +
Sbjct: 124 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINY 179
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 31 LGAGQFGEVWMGYYNG------HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 83
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 84 YAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL +T A + + APE +
Sbjct: 139 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINY 194
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 34/283 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG G FG V+ G N K +VA+K + + G +++ E + + H LV+L
Sbjct: 35 IGSGQFGLVHLGYWLN------KDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQL 87
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C + LV+E+M +G + YL + + L + D G+AYL E
Sbjct: 88 YGVCLEQ----APICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 143 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 198
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 248
Query: 332 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 374
+ + + N C + RP S +L + +I ++
Sbjct: 249 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 21 LGAGQFGEVWMGYYNG------HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 73
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 74 YAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL +T A + + APE +
Sbjct: 129 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINY 184
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+GEG FG V+ N K+ VAVK L K++ E L ++H+++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYL-------------SPKSETILTWAMRLKIA 199
G C + D ++V+EYM +G ++++L +P +E LT + L IA
Sbjct: 81 YGVCVEGDPL----IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE--LTQSQMLHIA 134
Query: 200 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
Q A G+ YL + RD + N L+ E K+ DFG++R S + V +
Sbjct: 135 QQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTM 191
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
+ + PE + + SDVWS GV L+E+ T G++P
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-GRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG FG V + D + ++ VAVK L G Q W E++ L + H++++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEM-VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G C D +Q LV EY+P GS+ YL S + A L AQ G+AYLH
Sbjct: 98 YKGCCEDAGAASLQ--LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHA 152
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG--TMGYAAPEY 269
I RD + N+LLD K+ DFGLA+ P EG G + + APE
Sbjct: 153 Q---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEXYRVREDGDSPVFWYAPEC 208
Query: 270 VQTGRLAARSDVWSYGVFLYELIT 293
++ + SDVWS+GV LYEL+T
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 56 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 114 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 164
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 263
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 165 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 95 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 145
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 263
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 146 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 55 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 113 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 163
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 263
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 164 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 93 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 143
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 263
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 144 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 96 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 146
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 263
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 147 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 29 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 87 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 137
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 263
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 138 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 142/292 (48%), Gaps = 33/292 (11%)
Query: 88 SRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLGIVEH 146
+R VIG G FG VYKG++K S ++V VA+K L + + +++ E +G H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSG-KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 147 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 206
N+++L G + + +++ EYM NG++D++L K + + + + A G+
Sbjct: 106 HNIIRLEGVIS----KYKPMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGM 160
Query: 207 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVGTMG 263
YL + + RD + NIL++ K+SDFGL+R+ P +T + +
Sbjct: 161 KYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIR 215
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 322
+ APE + + + SDVWS+G+ ++E++T G RP W LS+ +
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP-------------YW---ELSNHEV 259
Query: 323 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 374
+ I D + S + + C + RPK ++++ +++K++ A
Sbjct: 260 MKAIND-GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 94 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 144
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 263
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 145 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 42 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 100 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 150
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 263
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 151 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 34 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 92 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 142
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 263
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 143 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 95 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 145
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 263
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 146 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 44/291 (15%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 93 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 143
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 263
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 144 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 323
+ A E +QT + +SDVWS+GV L+EL+T P PY D F
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----------------PY-PDVNTF 242
Query: 324 RQIVDPRLEGKYSLR---LVSKLSHVANLCLVKNARTRPKMSEVLEMVNKI 371
I L+G+ L+ L V C A RP SE++ ++ I
Sbjct: 243 -DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 32 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 90 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 140
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 263
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 141 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 96 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 146
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 263
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 147 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 95 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 145
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 263
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 146 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 95 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 145
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 263
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 146 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 96 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 154 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 204
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 263
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 205 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 110/214 (51%), Gaps = 22/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV 150
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 205
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 94 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 144
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR--LGPSEGFTHVSTAVVGTMG 263
+ YL + + RD + N +LDE++ K++DFGLAR H T +
Sbjct: 145 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 27 LGAGQFGEVWMGYYNGH------TKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 80 YAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL T A + + APE +
Sbjct: 135 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINY 190
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 29 LGAGQFGEVWMGYYNG------HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 81
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 82 YAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL T A + + APE +
Sbjct: 137 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINY 192
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 30 LGAGQFGEVWMGYYNG------HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 82
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 83 YAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL T A + + APE +
Sbjct: 138 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINY 193
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 21 LGAGQFGEVWMGYYNG------HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 73
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 74 YAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL T A + + APE +
Sbjct: 129 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINY 184
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 23 LGAGQFGEVWMGYYNG------HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 75
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 76 YAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL T A + + APE +
Sbjct: 131 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINY 186
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 22 LGAGQFGEVWMGYYNG------HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 74
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 75 YAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL T A + + APE +
Sbjct: 130 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINY 185
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 21 LGAGQFGEVWMGYYNG------HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 73
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 74 YAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL T A + + APE +
Sbjct: 129 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINY 184
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 17 LGAGQFGEVWMGYYNG------HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 69
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 70 YAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I R+ +++NIL+ + + K++DFGLARL +T A + + APE +
Sbjct: 125 ---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINY 180
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 77 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 133
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + F V + + APE +
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+GEG FG V+ N K+ VAVK L + K++ E L ++H+++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKSETI-----------LTWAMRLKI 198
G C D D ++V+EYM +G ++++L P + + L + L I
Sbjct: 83 YGVCGDGDPL----IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV 258
A A G+ YL + RD + N L+ K+ DFG++R S + V
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 259 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
+ + + PE + + SDVWS+GV L+E+ T G++P
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V EYM NGS+D +L K + T + + + A
Sbjct: 103 FDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 157
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGLAR+ P +T +
Sbjct: 158 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI-- 212
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI--------- 260
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 261 -----KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK--EWMTEVNFLGIVEHQNLV 150
IG G FG V++ S+ VAVK L + + E++ EV + + H N+V
Sbjct: 45 IGAGSFGTVHRAEWHGSD-------VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-SETILTWAMRLKIAQDAARGLAYL 209
+G I V EY+ GS+ + L + L RL +A D A+G+ YL
Sbjct: 98 LFMGAVTQPPNLSI----VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H + I+ R+ KS N+L+D+++ K+ DFGL+RL S + S A GT + APE
Sbjct: 154 H-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--GTPEWMAPEV 210
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRP 297
++ +SDV+S+GV L+EL T ++P
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 121/240 (50%), Gaps = 24/240 (10%)
Query: 72 LKEFTIAELKSATKNFSRSV---------VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
+ FT + A + F++ + VIG G FG V G +K +++ VA+K
Sbjct: 11 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPG--KREIFVAIKT 68
Query: 123 LGRRGVQGHK-EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY 181
L + + ++++E + +G +H N++ L G + +++ E+M NGS+D +
Sbjct: 69 LKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT----KSTPVMIITEFMENGSLDSF 124
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L +++ T + + + A G+ YL D + RD + NIL++ K+SDFG
Sbjct: 125 LR-QNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFG 180
Query: 242 LARLGPSEGFTHVSTAVVG---TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
L+R + T+ +G + + APE +Q + + SDVWSYG+ ++E+++ G RP
Sbjct: 181 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V EYM NGS+D +L K + T + + + A
Sbjct: 103 FDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 157
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 158 SGMKYLS---DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 212
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI--------- 260
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 261 -----KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK--EWMTEVNFLGIVEHQNLV 150
IG G FG V++ S+ VAVK L + + E++ EV + + H N+V
Sbjct: 45 IGAGSFGTVHRAEWHGSD-------VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-SETILTWAMRLKIAQDAARGLAYL 209
+G I V EY+ GS+ + L + L RL +A D A+G+ YL
Sbjct: 98 LFMGAVTQPPNLSI----VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H + I+ RD KS N+L+D+++ K+ DFGL+RL S S GT + APE
Sbjct: 154 H-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX--SKXAAGTPEWMAPEV 210
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRP 297
++ +SDV+S+GV L+EL T ++P
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL +E I + L+ +G+ YL
Sbjct: 80 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQAHAERIDHIKL-LQYTSQICKGMEYLGTK 136
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQ 147
+GEG FG C Y + E + +VAVK L H + E+ L + H+
Sbjct: 29 LGEGHFGKVELCRY-----DPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 148 NLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLA 207
N+VK G C +D GI+ L+ E++P+GS+ +YL PK++ + +LK A +G+
Sbjct: 84 NIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMD 140
Query: 208 YLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAA 266
YL Q + RD + N+L++ + K+ DFGL + + + V + + A
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 267 PEYVQTGRLAARSDVWSYGVFLYELIT 293
PE + + SDVWS+GV L+EL+T
Sbjct: 198 PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 76 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 132
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 133 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 144/293 (49%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V EYM NGS+D +L K + T + + + A
Sbjct: 103 FDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 157
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 158 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 212
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q +++ V
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVIKAVD----- 264
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ +R + P ++ + L + C K+ RPK +++ +++K++
Sbjct: 265 -EGYR--LPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V EYM NGS+D +L K + T + + + A
Sbjct: 103 FDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 157
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 158 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 212
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI--------- 260
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 261 -----KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V EYM NGS+D +L K + T + + + A
Sbjct: 103 FDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 157
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 158 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 212
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI--------- 260
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 261 -----KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V EYM NGS+D +L K + T + + + A
Sbjct: 103 FDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 157
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 158 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 212
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI--------- 260
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 261 -----KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 21/219 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+GEG FG V+ N K+ VAVK L +++ E L +++HQ++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKSETI----------LTWAMRLKIA 199
G C + G L+V+EYM +G ++++L P ++ + L L +A
Sbjct: 86 FGVCTE----GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 200 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
A G+ YL G+ F + RD + N L+ + K+ DFG++R S + V +
Sbjct: 142 SQVAAGMVYL-AGLHF--VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
+ + PE + + SDVWS+GV L+E+ T G++P
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 21/219 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+GEG FG V+ N K+ VAVK L +++ E L +++HQ++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKSETI----------LTWAMRLKIA 199
G C + G L+V+EYM +G ++++L P ++ + L L +A
Sbjct: 80 FGVCTE----GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 200 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
A G+ YL G+ F + RD + N L+ + K+ DFG++R S + V +
Sbjct: 136 SQVAAGMVYL-AGLHF--VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
+ + PE + + SDVWS+GV L+E+ T G++P
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 144/293 (49%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 100
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V EYM NGS+D +L K + T + + + A
Sbjct: 101 FDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 155
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 156 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 210
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q +++ V
Sbjct: 211 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVIKAVD----- 262
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ +R + P ++ + L + C K+ RPK +++ +++K++
Sbjct: 263 -EGYR--LPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 306
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 77 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 133
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQ 147
+GEG FG C Y + E + +VAVK L H + E+ L + H+
Sbjct: 17 LGEGHFGKVELCRY-----DPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 148 NLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLA 207
N+VK G C +D GI+ L+ E++P+GS+ +YL PK++ + +LK A +G+
Sbjct: 72 NIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMD 128
Query: 208 YLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAA 266
YL Q + RD + N+L++ + K+ DFGL + + + V + + A
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 267 PEYVQTGRLAARSDVWSYGVFLYELIT 293
PE + + SDVWS+GV L+EL+T
Sbjct: 186 PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 81 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 137
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 138 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 144/293 (49%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V EYM NGS+D +L K + T + + + A
Sbjct: 74 FDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 128
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 129 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 183
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q +++ V
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVIKAVD----- 235
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ +R + P ++ + L + C K+ RPK +++ +++K++
Sbjct: 236 -EGYR--LPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 75 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 131
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 132 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 80 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 136
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V EYM NGS+D +L K + T + + + A
Sbjct: 103 FDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 157
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL R+ P +T +
Sbjct: 158 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI-- 212
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI--------- 260
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 261 -----KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 82 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 138
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 139 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 77 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 133
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 83 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 139
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 140 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 84 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 140
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 141 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 108 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 164
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 165 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 21/219 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+GEG FG V+ N K+ VAVK L +++ E L +++HQ++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKSETI----------LTWAMRLKIA 199
G C + G L+V+EYM +G ++++L P ++ + L L +A
Sbjct: 109 FGVCTE----GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 200 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
A G+ YL G+ F + RD + N L+ + K+ DFG++R S + V +
Sbjct: 165 SQVAAGMVYL-AGLHF--VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
+ + PE + + SDVWS+GV L+E+ T G++P
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ E++P GS+ +YL E I + L+ +G+ YL
Sbjct: 80 KGVCYSAGRRNLK--LIMEFLPYGSLREYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 136
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 144/293 (49%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 90
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V EYM NGS+D +L K + T + + + A
Sbjct: 91 FDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 145
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 146 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 200
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q +++ V
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVIKAVD----- 252
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ +R + P ++ + L + C K+ RPK +++ +++K++
Sbjct: 253 -EGYR--LPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 296
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G G V+ G +VAVK L ++G ++ E N + ++HQ LV+L
Sbjct: 21 LGAGQAGEVWMGYYNG------HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL 73
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 74 YAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ + + K++DFGLARL T A + + APE +
Sbjct: 129 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF-PIKWTAPEAINY 184
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 95 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 151
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 152 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 78 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 134
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I R+ + NIL++ + K+ DFGL ++ P + + V + + APE +
Sbjct: 135 ---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG V +D + +V VAVK+L + +++ E+ L ++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 95 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 151
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 271
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 152 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 272 TGRLAARSDVWSYGVFLYELIT 293
+ + SDVWS+GV LYEL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 146/318 (45%), Gaps = 42/318 (13%)
Query: 63 PSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
P + P+ E++++ R VIG G FG V G +K V + +
Sbjct: 2 PHTYEDPNQAVHEFAKEIEASCITIER--VIGAGEFGEVCSGRLKLPGKRELPVAIKTLK 59
Query: 123 LGRRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL 182
+G Q ++++ E + +G +H N++ L G + ++V EYM NGS+D +L
Sbjct: 60 VGYTEKQ-RRDFLGEASIMGQFDHPNIIHLEGVVT----KSKPVMIVTEYMENGSLDTFL 114
Query: 183 SPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL 242
K++ T + + + + G+ YL D + RD + NIL++ K+SDFGL
Sbjct: 115 K-KNDGQFTVIQLVGMLRGISAGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGL 170
Query: 243 ARL---GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP- 297
+R+ P +T + + + APE + + + SDVWSYG+ ++E+++ G RP
Sbjct: 171 SRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY 228
Query: 298 ---IDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKN 354
+++ ++ ++ + P A ++ ++D C K
Sbjct: 229 WEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLD---------------------CWQKE 267
Query: 355 ARTRPKMSEVLEMVNKIV 372
+RPK E++ M++K++
Sbjct: 268 RNSRPKFDEIVNMLDKLI 285
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 16/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G NS +VAVK L + G + ++ E N + ++H LV+L
Sbjct: 21 LGAGQFGEVWMGYYNNS------TKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRL 73
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
Y E I ++ EYM GS+ +L + + + A G+AY+
Sbjct: 74 --YAVVTREEPI--YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++N+L+ E K++DFGLAR+ +T A + + APE +
Sbjct: 130 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINF 185
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ LYE++T G+ P
Sbjct: 186 GCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 20 IGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L SET + IA+ ARG+ YLH
Sbjct: 72 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLH 125
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 126 AK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
Query: 271 Q---TGRLAARSDVWSYGVFLYELITGRRP 297
+ + + +SDV+++G+ LYEL+TG+ P
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 17/239 (7%)
Query: 63 PSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
P + P+ EL ++ R VIG G FG V G +K V + +
Sbjct: 23 PETYEDPNRAVHQFAKELDASCIKIER--VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK 80
Query: 123 LGRRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL 182
+G Q ++++ E + +G +H N+V L G RG ++V E+M NG++D +L
Sbjct: 81 VGYTEKQ-RRDFLCEASIMGQFDHPNVVHLEGVVT----RGKPVMIVIEFMENGALDAFL 135
Query: 183 SPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL 242
K + T + + + A G+ YL D + RD + NIL++ K+SDFGL
Sbjct: 136 R-KHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGL 191
Query: 243 ARL---GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
+R+ P +T + + + APE +Q + + SDVWSYG+ ++E+++ G RP
Sbjct: 192 SRVIEDDPEAVYTTTGGKI--PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 273 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 325
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L ++ L + +A A G+AY+
Sbjct: 326 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV- 379
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 380 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 436
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 190 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L ++ L + +A A G+AY+
Sbjct: 243 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV- 296
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 297 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 353
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 190 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L ++ L + +A A G+AY+
Sbjct: 243 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV- 296
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 297 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 353
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V E M NGS+D +L K + T + + + A
Sbjct: 103 FDHPNIIRLEGVVT----KSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 157
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 158 SGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 212
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI--------- 260
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 261 -----KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 44/297 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V E M NGS+D +L K + T + + + A
Sbjct: 103 FDHPNIIRLEGVVT----KSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 157
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 158 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 212
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPI----DRNRPRSEQKLLQWVKP 315
+ + +PE + + + SDVWSYG+ L+E+++ G RP +++ ++ + + P
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
Query: 316 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
A ++ ++D C K+ RPK +++ +++K++
Sbjct: 273 MDCPAALYQLMLD---------------------CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 17 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L ++ L + +A A G+AY+
Sbjct: 70 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV- 123
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 124 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 180
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 22/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 32 IGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L SET + IA+ ARG+ YLH
Sbjct: 84 LFMGYST-----APQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLH 137
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA +H + G++ + APE +
Sbjct: 138 AK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 271 Q---TGRLAARSDVWSYGVFLYELITGRRP 297
+ + + +SDV+++G+ LYEL+TG+ P
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGVQGHK-EWMTEVNFLGI 143
N S V+G G FG V G +K PS+K + VA+K L + + +++ E + +G
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H N+++L G + ++V E M NGS+D +L K + T + + + A
Sbjct: 74 FDHPNIIRLEGVVT----KSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGIA 128
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVG 260
G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 129 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-- 183
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSD 319
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI--------- 231
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 232 -----KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 22/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 32 IGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L SET + IA+ ARG+ YLH
Sbjct: 84 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLH 137
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA +H + G++ + APE +
Sbjct: 138 AK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 271 Q---TGRLAARSDVWSYGVFLYELITGRRP 297
+ + + +SDV+++G+ LYEL+TG+ P
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 17/212 (8%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVE-VAVKQL-GRRGVQGHKEWMTEVNFLGIVEHQNL 149
VIG G FG V +G +K P +K VA+K L G + +E+++E + +G EH N+
Sbjct: 23 VIGAGEFGEVCRGRLKA---PGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
++L G + + +++ E+M NG++D +L ++ T + + + A G+ YL
Sbjct: 80 IRLEGVVTNS----MPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRGIASGMRYL 134
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG---TMGYAA 266
E + RD + NIL++ K+SDFGL+R T+ +G + + A
Sbjct: 135 AE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 267 PEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
PE + + + SD WSYG+ ++E+++ G RP
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 190 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L ++ L + +A A G+AY+
Sbjct: 243 QLYAVVSEEP-----IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV- 296
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 297 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 353
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 151/314 (48%), Gaps = 47/314 (14%)
Query: 75 FTIAELKSATKNFSRSV---------VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-- 123
FT + A + F++ + VIG G FG V G +K +++ VA+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPG--KREICVAIKTLKA 67
Query: 124 GRRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS 183
G Q +++++E + +G +H N++ L G + +++ EYM NGS+D +L
Sbjct: 68 GYTDKQ-RRDFLSEASIMGQFDHPNIIHLEGVVT----KCKPVMIITEYMENGSLDAFLR 122
Query: 184 PKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA 243
K++ T + + + G+ YL D + RD + NIL++ K+SDFG++
Sbjct: 123 -KNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 244 RL---GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPID 299
R+ P +T + + + APE + + + SDVWSYG+ ++E+++ G RP
Sbjct: 179 RVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY- 235
Query: 300 RNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANL-CLVKNARTR 358
S Q +++ ++ + +R + P ++ +L H L C K R
Sbjct: 236 --WDMSNQDVIKAIE------EGYR--LPPPMDCPIAL-------HQLMLDCWQKERSDR 278
Query: 359 PKMSEVLEMVNKIV 372
PK +++ M++K++
Sbjct: 279 PKFGQIVNMLDKLI 292
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 77 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 127
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 128 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 183 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 228
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L + L + +A A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV- 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 131 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 187
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 80 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 130
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 131 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 186 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 231
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 86 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 136
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 137 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 192 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 237
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 79 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 130 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 185 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 78 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 129 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 184 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 77 NPHVCRLLGICLTSTVQ-----LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI---- 127
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 128 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 183 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLW-IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 32/292 (10%)
Query: 38 GRIGSELTS-----QNVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSAT-KNFSRSV 91
G +GSEL S + ++ ++ P+Y K +I++LK KN +
Sbjct: 24 GAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAG------KTSSISDLKEVPRKNITLIR 77
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGHKEWMTEVNFLGIVEHQNLV 150
+G G FG VY+G + + ++VAVK L Q +++ E + HQN+V
Sbjct: 78 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PKSETILTWAMRLKIAQDAARG 205
+ +G + + R ++ E M G + +L P + L L +A+D A G
Sbjct: 138 RCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGLARLGPSEGFTHVSTAVVGTM 262
YL E I RD + N LL AK+ DFG+AR G+ + +
Sbjct: 194 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 250
Query: 263 GYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWV 313
+ PE G +++D WS+GV L+E+ + G P +S Q++L++V
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV 299
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 83 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 134 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 189 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 32/292 (10%)
Query: 38 GRIGSELTS-----QNVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSAT-KNFSRSV 91
G +GSEL S + ++ ++ P+Y K +I++LK KN +
Sbjct: 1 GAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAG------KTSSISDLKEVPRKNITLIR 54
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGHKEWMTEVNFLGIVEHQNLV 150
+G G FG VY+G + + ++VAVK L Q +++ E + HQN+V
Sbjct: 55 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 114
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PKSETILTWAMRLKIAQDAARG 205
+ +G + + R ++ E M G + +L P + L L +A+D A G
Sbjct: 115 RCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGLARLGPSEGFTHVSTAVVGTM 262
YL E I RD + N LL AK+ DFG+AR G+ + +
Sbjct: 171 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 227
Query: 263 GYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWV 313
+ PE G +++D WS+GV L+E+ + G P +S Q++L++V
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV 276
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + I +L MP G + Y+ S+ +L W +++
Sbjct: 70 NPHVCRLLGICLTSTVQLITQL-----MPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 120
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 121 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 176 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 79 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 130 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 185 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 79 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 130 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 185 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 82 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 132
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 133 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 188 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 233
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L + L + +A A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV- 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 131 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 187
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 16/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G NS +VAVK L + G + ++ E N + ++H LV+L
Sbjct: 20 LGAGQFGEVWMGYYNNS------TKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRL 72
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
Y E I ++ E+M GS+ +L + + + A G+AY+
Sbjct: 73 --YAVVTKEEPI--YIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++N+L+ E K++DFGLAR+ +T A + + APE +
Sbjct: 129 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINF 184
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +S+VWS+G+ LYE++T G+ P
Sbjct: 185 GCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 79 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 130 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 185 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 15 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L + L + +A A G+AY+
Sbjct: 68 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV- 121
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 122 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 178
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 78 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 129 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 184 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 13 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L + L + +A A G+AY+
Sbjct: 66 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV- 119
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 120 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 176
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 101 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 151
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 152 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 207 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 252
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 17/212 (8%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVE-VAVKQL-GRRGVQGHKEWMTEVNFLGIVEHQNL 149
VIG G FG V +G +K P +K VA+K L G + +E+++E + +G EH N+
Sbjct: 21 VIGAGEFGEVCRGRLKA---PGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
++L G + + +++ E+M NG++D +L ++ T + + + A G+ YL
Sbjct: 78 IRLEGVVTNS----MPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG---TMGYAA 266
E + RD + NIL++ K+SDFGL+R T+ +G + + A
Sbjct: 133 AE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 267 PEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
PE + + + SD WSYG+ ++E+++ G RP
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L + L + +A A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV- 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 131 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 187
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 27/244 (11%)
Query: 71 NLKEFTIAELKSATKNFSRSV-----VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR 125
+L +AE+K R V VIG+G FG VY G + + +++ A+K L R
Sbjct: 2 DLDSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHG--EYIDQAQNRIQCAIKSLSR 59
Query: 126 -RGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-- 182
+Q + ++ E + + H N++ L+G + G+ +L+ YM +G + Q++
Sbjct: 60 ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE--GLPHVLL-PYMCHGDLLQFIRS 116
Query: 183 ---SPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSD 239
+P + ++++ +++ ARG+ YL E + + RD + N +LDE + K++D
Sbjct: 117 PQRNPTVKDLISFGLQV------ARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVAD 167
Query: 240 FGLARLGPSEGFTHVSTAVVGTMG--YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
FGLAR + V + + A E +QT R +SDVWS+GV L+EL+T P
Sbjct: 168 FGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
Query: 298 IDRN 301
R+
Sbjct: 228 PYRH 231
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L + L + +A A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV- 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 131 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 187
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 21 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L ++ L + ++ A G+AY+
Sbjct: 74 QLYAVVSEEP-----IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV- 127
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 128 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 184
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 119/238 (50%), Gaps = 30/238 (12%)
Query: 76 TIAELKSATKNFSRSV---------VIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGR 125
T E A ++F+R + +IG G G V G ++ P Q+ V VA+K L +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRV---PGQRDVPVAIKAL-K 86
Query: 126 RGV--QGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS 183
G + +++++E + +G +H N+++L G RG ++V EYM NGS+D +L
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMIVTEYMENGSLDTFLR 142
Query: 184 PKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA 243
+ T + + + G+ YL D + RD + N+L+D K+SDFGL+
Sbjct: 143 -THDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Query: 244 RL---GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
R+ P +T + + + APE + ++ SDVWS+GV ++E++ G RP
Sbjct: 199 RVLEDDPDAAYTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 14 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L ++ L + +A A G+AY+
Sbjct: 67 QLYAVVSEEP-----IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV- 120
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL T A + + APE
Sbjct: 121 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAA 177
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 73 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 123
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 124 --AEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 179 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 224
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 118/236 (50%), Gaps = 21/236 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V G + D VA+K + + G E++ E + + H+ LV+L
Sbjct: 12 LGTGQFGVVKYGKWRGQYD------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 65 YGVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK 119
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 120 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 175
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 323
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 231
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 118/236 (50%), Gaps = 21/236 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V G + D VA+K + + G E++ E + + H+ LV+L
Sbjct: 16 LGTGQFGVVKYGKWRGQYD------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 68
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 69 YGVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK 123
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 124 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 179
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 323
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 235
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L + L + +A A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV- 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD ++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 131 ERMNY--VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 187
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 15/211 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLGIVEHQNLV 150
VIG G FG V G +K +++ VA+K L + + ++++E + +G +H N++
Sbjct: 14 VIGAGEFGEVCSGHLKLPG--KREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
L G + +++ E+M NGS+D +L +++ T + + + A G+ YL
Sbjct: 72 HLEGVVT----KSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYL- 125
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG---TMGYAAP 267
D + R + NIL++ K+SDFGL+R + T+ +G + + AP
Sbjct: 126 --ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E +Q + + SDVWSYG+ ++E+++ G RP
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 21 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L ++ L + ++ A G+AY+
Sbjct: 74 QLYAVVSEEP-----IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV- 127
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 128 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAA 184
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 92 VIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRR-GVQGHKEWMTEVNFLGIVEHQNL 149
V+G G FG VYKG+ I + E+ K+ VA+K L + +KE + E + V +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGEN--VKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
+L+G C + + +L+ Y + + + S+ +L W M++ A+G++YL
Sbjct: 82 SRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYL 135
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
D +++ RD + N+L+ + K++DFGLARL + + + + + A E
Sbjct: 136 E---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 270 VQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQ 311
+ R +SDVWSYGV ++EL+T G +P D R LL+
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE 235
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 43 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 95 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 148
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 149 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 271 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 326
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 264
Query: 327 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 368
++ RL+++ CL K RP ++L +
Sbjct: 265 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 294
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 21 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 73 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 127 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 271 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 326
+ + +SDV+++G+ LYEL+TG+ P R +Q + + YLS D + R
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYLSPDLSKVRSN 242
Query: 327 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 368
++ RL+++ CL K RP ++L +
Sbjct: 243 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 272
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 21 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 73 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 127 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 271 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 326
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 242
Query: 327 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 368
++ RL+++ CL K RP ++L +
Sbjct: 243 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 272
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM G + +L + L + +A A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV- 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 131 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 187
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 39/223 (17%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFLG-IVEHQNL 149
VIGEG FG V K IK +++ A+K++ + H+++ E+ L + H N+
Sbjct: 32 VIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL--------------SPKSETILTWAMR 195
+ L+G C + RG L + EY P+G++ +L + + + L+
Sbjct: 89 INLLGAC---EHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 196 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 255
L A D ARG+ YL + Q I RD + NIL+ E + AK++DFGL+R
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--------GQE 193
Query: 256 TAVVGTMG-----YAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
V TMG + A E + SDVWSYGV L+E+++
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 118/236 (50%), Gaps = 21/236 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V G + D VA+K + + G E++ E + + H+ LV+L
Sbjct: 17 LGTGQFGVVKYGKWRGQYD------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 70 YGVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK 124
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 125 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 180
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 323
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 236
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 34/222 (15%)
Query: 93 IGEGGFGCVYKG-LIKNSEDPSQKVEVAVKQLGRRGVQGH-------KEWMTEVNFLGIV 144
IG+GGFG V+KG L+K+ K VA+K L +G +E+ EV + +
Sbjct: 27 IGKGGFGLVHKGRLVKD------KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 145 EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 204
H N+VKL G + +V E++P G + L K+ I W+++L++ D A
Sbjct: 81 NHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILL---DEQWN--AKLSDFGLARLGPSEGFTHVSTAVV 259
G+ Y+ + + I+ RD +S NI L DE AK++DFGL S+ H + ++
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-----SQQSVHSVSGLL 187
Query: 260 GTMGYAAPEYV--QTGRLAARSDVWSYGVFLYELITGRRPID 299
G + APE + + ++D +S+ + LY ++TG P D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 18 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 70 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 123
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 124 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
Query: 271 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 326
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 239
Query: 327 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 368
++ RL+++ CL K RP ++L +
Sbjct: 240 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 269
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 44 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 96 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 149
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 150 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 271 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 326
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 265
Query: 327 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 368
++ RL+++ CL K RP ++L +
Sbjct: 266 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 295
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 118/236 (50%), Gaps = 21/236 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V G + D VA+K + + G E++ E + + H+ LV+L
Sbjct: 32 LGTGQFGVVKYGKWRGQYD------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 85 YGVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK 139
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 140 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 195
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 323
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 251
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L + L + +A A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV- 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL T A + + APE
Sbjct: 131 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAA 187
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 39/223 (17%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFLG-IVEHQNL 149
VIGEG FG V K IK +++ A+K++ + H+++ E+ L + H N+
Sbjct: 22 VIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL--------------SPKSETILTWAMR 195
+ L+G C + RG L + EY P+G++ +L + + + L+
Sbjct: 79 INLLGAC---EHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 196 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 255
L A D ARG+ YL + Q I RD + NIL+ E + AK++DFGL+R
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--------GQE 183
Query: 256 TAVVGTMG-----YAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
V TMG + A E + SDVWSYGV L+E+++
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM G + +L + L + +A A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV- 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 131 ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 187
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 113/223 (50%), Gaps = 26/223 (11%)
Query: 86 NFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGI 143
F + V+G G FG VYKGL I E K+ VA+ +L + +KE + E +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGE--KVKIPVAIMELREATSPKANKEILDEAYVMAS 107
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKI 198
V++ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 108 VDNPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 160
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTA 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H
Sbjct: 161 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPID 299
V + + A E + +SDVWSYGV ++EL+T G +P D
Sbjct: 214 KV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 16 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 68 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 122 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 271 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 326
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 327 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 368
++ RL+++ CL K RP ++L +
Sbjct: 238 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 267
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+ G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 83 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 134 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 189 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 80 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 130
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 131 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 185
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 186 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 231
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 19 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 73 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + FT + A + + APE +
Sbjct: 129 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF-PIKWTAPESLAY 184
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
+ + +SDVW++GV L+E+ T G P P +LL+ K +R R
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------KDYRM---ERP 232
Query: 332 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 376
EG K+ + C N RP +E+ + + S+
Sbjct: 233 EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+ G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 118/236 (50%), Gaps = 21/236 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V G + D VA+K + + G E++ E + + H+ LV+L
Sbjct: 17 LGTGQFGVVKYGKWRGQYD------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 70 YGVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK 124
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 125 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SRGSKFPVRWSPPEVLMY 180
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 323
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 236
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 118/236 (50%), Gaps = 21/236 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V G + D VA+K + + G E++ E + + H+ LV+L
Sbjct: 23 LGTGQFGVVKYGKWRGQYD------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 76 YGVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK 130
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 131 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 186
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 323
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 242
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 16 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 68 LFMGYST-----APQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 122 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 271 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 326
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 327 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 368
++ RL+++ CL K RP ++L +
Sbjct: 238 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 267
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+ G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 83 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 134 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 189 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 249
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 250 --KSNQEVLEFV 259
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V +G+G FG V+ G + VA+K L + G + ++ E + + H+ LV
Sbjct: 191 VKLGQGCFGEVWMGTWNGT------TRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLV 243
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+L +++ +V EYM GS+ +L + L + +A A G+AY+
Sbjct: 244 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV- 297
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
E M++ + RD +++NIL+ E K++DFGL RL +T A + + APE
Sbjct: 298 ERMNY--VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAA 354
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL T GR P
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 78 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 129 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 184 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 38/288 (13%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL--GRRGVQGHKEWMTEVNFLGIVEHQNL 149
VIG G FG V G +K +++ VA+K L G Q +++++E + +G +H N+
Sbjct: 21 VIGVGEFGEVCSGRLKVPG--KREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNI 77
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
+ L G + +++ EYM NGS+D +L K++ T + + + G+ YL
Sbjct: 78 IHLEGVVT----KCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVGTMGYAA 266
D + RD + NIL++ K+SDFG++R+ P +T + + + A
Sbjct: 133 S---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTA 187
Query: 267 PEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQ 325
PE + + + SDVWSYG+ ++E+++ G RP S Q +++ ++ + +R
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY---WDMSNQDVIKAIE------EGYR- 237
Query: 326 IVDPRLEGKYSLRLVSKLSHVANL-CLVKNARTRPKMSEVLEMVNKIV 372
+ P ++ +L H L C K RPK +++ M++K++
Sbjct: 238 -LPPPMDCPIAL-------HQLMLDCWQKERSDRPKFGQIVNMLDKLI 277
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 78 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 129 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 184 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 30/238 (12%)
Query: 76 TIAELKSATKNFSRSV---------VIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGR 125
T E A ++F+R + +IG G G V G ++ P Q+ V VA+K L +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRV---PGQRDVPVAIKAL-K 86
Query: 126 RGV--QGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS 183
G + +++++E + +G +H N+++L G RG ++V EYM NGS+D +L
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMIVTEYMENGSLDTFLR 142
Query: 184 PKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA 243
+ T + + + G+ YL D + RD + N+L+D K+SDFGL+
Sbjct: 143 -THDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Query: 244 RL---GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
R+ P T + + + APE + ++ SDVWS+GV ++E++ G RP
Sbjct: 199 RVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 78 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 129 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 184 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 38/288 (13%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL--GRRGVQGHKEWMTEVNFLGIVEHQNL 149
VIG G FG V G +K +++ VA+K L G Q +++++E + +G +H N+
Sbjct: 15 VIGVGEFGEVCSGRLKVPG--KREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNI 71
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
+ L G + +++ EYM NGS+D +L K++ T + + + G+ YL
Sbjct: 72 IHLEGVVT----KCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVGTMGYAA 266
D + RD + NIL++ K+SDFG++R+ P +T + + + A
Sbjct: 127 S---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTA 181
Query: 267 PEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQ 325
PE + + + SDVWSYG+ ++E+++ G RP S Q +++ ++ + +R
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY---WDMSNQDVIKAIE------EGYR- 231
Query: 326 IVDPRLEGKYSLRLVSKLSHVANL-CLVKNARTRPKMSEVLEMVNKIV 372
+ P ++ +L H L C K RPK +++ M++K++
Sbjct: 232 -LPPPMDCPIAL-------HQLMLDCWQKERSDRPKFGQIVNMLDKLI 271
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQGHKEWMTEVNFLGIVE 145
F + V+G G FG VYKGL E K+ VA+K+L + +KE + E + V+
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 200
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 83 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 259
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 134 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 306
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 189 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 92 ELDFLMEALIISKLNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 147
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 263
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 264 --KSNQEVLEFV 273
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 25/211 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG+G FG V G + ++ VAVK + + ++ E + + + H NLV+L
Sbjct: 201 IGKGEFGDVMLGDYRGNK-------VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 251
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G + E+G +V EYM GS+ YL + ++L LK + D + YL EG
Sbjct: 252 LGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EG 307
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM--GYAAPEYV 270
+F + RD + N+L+ E AK+SDFGL + S T G + + APE +
Sbjct: 308 NNF--VHRDLAARNVLVSEDNVAKVSDFGLTKEASS-------TQDTGKLPVKWTAPEAL 358
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRPIDR 300
+ + + +SDVWS+G+ L+E+ + GR P R
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYSFGRVPYPR 389
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 249
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 250 --KSNQEVLEFV 259
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 90 SVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNL 149
S IG G FG VYKG V V + ++ + + + EV L H N+
Sbjct: 41 STRIGSGSFGTVYKGKWHGD------VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI 94
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
+ +GY D+ +V ++ S+ ++L + ET + IA+ A+G+ YL
Sbjct: 95 LLFMGYMTKDN-----LAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYL 148
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H II RD KS+NI L E K+ DFGLA + + G++ + APE
Sbjct: 149 HAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEV 205
Query: 270 VQ---TGRLAARSDVWSYGVFLYELITGRRP 297
++ + +SDV+SYG+ LYEL+TG P
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 126/282 (44%), Gaps = 36/282 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 36 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 88 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 141
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA +H + G++ + APE +
Sbjct: 142 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 271 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 326
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 257
Query: 327 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 368
++ RL+++ CL K RP ++L +
Sbjct: 258 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 287
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 83
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 84 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 139
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 140 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 196
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 197 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 255
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 256 --KSNQEVLEFV 265
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ G + +VA+K L + G + ++ E + ++H LV+L
Sbjct: 17 LGNGQFGEVWMGTWNGN------TKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQL 69
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+++ +V EYM GS+ +L L + +A A G+AY+ E
Sbjct: 70 YAVVSEEP-----IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI-ER 123
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
M++ I RD +S+NIL+ K++DFGLARL T A + + APE
Sbjct: 124 MNY--IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALY 180
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
GR +SDVWS+G+ L EL+T GR P
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 126/293 (43%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY KNS K +A+K QL + GV+ + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNS-----KFILALKVLFKAQLEKAGVE--HQLRRE 58
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 59 VEIQSHLRHPNILRLYGYFHD----STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 115 TEL------ANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 162
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
A+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 163 -RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV 221
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGV----SLQSLPRFILMELMAGGDLKSFLRETRPRPS 132
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 248
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 249 --KSNQEVLEFV 258
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-RGVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQD 91
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 147
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 263
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 264 --KSNQEVLEFV 273
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 126/282 (44%), Gaps = 36/282 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 44 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 96 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 149
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA +H + G++ + APE +
Sbjct: 150 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 271 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 326
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 265
Query: 327 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 368
++ RL+++ CL K RP ++L +
Sbjct: 266 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 295
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 103
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 104 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 159
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 160 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 216
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 217 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 275
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 276 --KSNQEVLEFV 285
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPS 132
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 248
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 249 --KSNQEVLEFV 258
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 68
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 69 ELDFLMEALIISKFNHQNIVRCIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPS 124
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 125 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 181
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 182 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 240
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 241 --KSNQEVLEFV 250
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 25/211 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG+G FG V G + ++ VAVK + + ++ E + + + H NLV+L
Sbjct: 14 IGKGEFGDVMLGDYRGNK-------VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 64
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G + E+G +V EYM GS+ YL + ++L LK + D + YL EG
Sbjct: 65 LGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EG 120
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM--GYAAPEYV 270
+F + RD + N+L+ E AK+SDFGL + S T G + + APE +
Sbjct: 121 NNF--VHRDLAARNVLVSEDNVAKVSDFGLTKEASS-------TQDTGKLPVKWTAPEAL 171
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRPIDR 300
+ + + +SDVWS+G+ L+E+ + GR P R
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYSFGRVPYPR 202
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 93
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 94 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 149
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 150 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 206
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 207 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 265
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 266 --KSNQEVLEFV 275
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 27/239 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V G + D VA+K + + G E++ E + + H+ LV+L
Sbjct: 32 LGTGQFGVVKYGKWRGQYD------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 85 YGVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK 139
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT---MGYAAPEY 269
Q + RD + N L+++Q K+SDFGL+R + T+ VG+ + ++ PE
Sbjct: 140 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----ETSSVGSKFPVRWSPPEV 192
Query: 270 VQTGRLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 323
+ + +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 251
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAV---KQLGRRGVQGHKEWMTEVNFLG 142
N+ +GEG FG K + QKV + + K L + +QG E E+++L
Sbjct: 14 NYQIVKTLGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLR 68
Query: 143 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 202
++ H +++KL DE ++V EY N D Y+ + + A R Q
Sbjct: 69 LLRHPHIIKLYDVIKSKDEI----IMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQI 121
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 262
+ Y H +I+ RD K N+LLDE N K++DFGL+ + F S G+
Sbjct: 122 ISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSP 175
Query: 263 GYAAPEYVQTGRLAA--RSDVWSYGVFLYELITGRRPID 299
YAAPE V +G+L A DVWS GV LY ++ R P D
Sbjct: 176 NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAV---KQLGRRGVQGHKEWMTEVNFLG 142
N+ +GEG FG K + QKV + + K L + +QG E E+++L
Sbjct: 5 NYQIVKTLGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLR 59
Query: 143 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 202
++ H +++KL DE ++V EY N D Y+ + + A R Q
Sbjct: 60 LLRHPHIIKLYDVIKSKDEI----IMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQI 112
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 262
+ Y H +I+ RD K N+LLDE N K++DFGL+ + F S G+
Sbjct: 113 ISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSP 166
Query: 263 GYAAPEYVQTGRLAA--RSDVWSYGVFLYELITGRRPID 299
YAAPE V +G+L A DVWS GV LY ++ R P D
Sbjct: 167 NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAV---KQLGRRGVQGHKEWMTEVNFLG 142
N+ +GEG FG K + QKV + + K L + +QG E E+++L
Sbjct: 15 NYQIVKTLGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLR 69
Query: 143 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 202
++ H +++KL DE ++V EY N D Y+ + + A R Q
Sbjct: 70 LLRHPHIIKLYDVIKSKDEI----IMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQI 122
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 262
+ Y H +I+ RD K N+LLDE N K++DFGL+ + F S G+
Sbjct: 123 ISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSP 176
Query: 263 GYAAPEYVQTGRLAA--RSDVWSYGVFLYELITGRRPID 299
YAAPE V +G+L A DVWS GV LY ++ R P D
Sbjct: 177 NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILMELMAGGDLKSFLRETRPRPS 147
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 263
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 264 --KSNQEVLEFV 273
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 126/282 (44%), Gaps = 36/282 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMTEVNFLGIVEHQNLV 150
IG G FG VYKG +VAVK L Q + + EV L H N++
Sbjct: 16 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 68 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD KS+NI L E K+ DFGLA +H + G++ + APE +
Sbjct: 122 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 271 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 326
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 327 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 368
++ RL+++ CL K RP ++L +
Sbjct: 238 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 267
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 108/223 (48%), Gaps = 39/223 (17%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFLG-IVEHQNL 149
VIGEG FG V K IK +++ A+K++ + H+++ E+ L + H N+
Sbjct: 29 VIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL--------------SPKSETILTWAMR 195
+ L+G C + RG L + EY P+G++ +L + + + L+
Sbjct: 86 INLLGAC---EHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 196 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 255
L A D ARG+ YL + Q I R+ + NIL+ E + AK++DFGL+R
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR--------GQE 190
Query: 256 TAVVGTMG-----YAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
V TMG + A E + SDVWSYGV L+E+++
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 109/211 (51%), Gaps = 27/211 (12%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNFLGIVEHQ 147
V+G G FG V+KG + E S K+ V +K + GR+ Q + M + G ++H
Sbjct: 38 VLGSGVFGTVHKG-VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI---GSLDHA 93
Query: 148 NLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDA 202
++V+L+G C G LV +Y+P GS+ ++ + + +L W +++
Sbjct: 94 HIVRLLGLCP-----GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------ 142
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 262
A+G+ YL E ++ R+ + N+LL +++DFG+A L P + + + +
Sbjct: 143 AKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 263 GYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ A E + G+ +SDVWSYGV ++EL+T
Sbjct: 200 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 25/211 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG+G FG V G + ++ VAVK + + ++ E + + + H NLV+L
Sbjct: 29 IGKGEFGDVMLGDYRGNK-------VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G + E+G +V EYM GS+ YL + ++L LK + D + YL EG
Sbjct: 80 LGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EG 135
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM--GYAAPEYV 270
+F + RD + N+L+ E AK+SDFGL + S T G + + APE +
Sbjct: 136 NNF--VHRDLAARNVLVSEDNVAKVSDFGLTKEASS-------TQDTGKLPVKWTAPEAL 186
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRPIDR 300
+ + + +SDVWS+G+ L+E+ + GR P R
Sbjct: 187 REKKFSTKSDVWSFGILLWEIYSFGRVPYPR 217
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 84
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 85 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 141 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 188
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 189 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 248 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
V+G+G FG IK + + +V V +K+L R + + ++ EV + +EH N++K
Sbjct: 17 VLGKGCFG----QAIKVTHRETGEVMV-MKELIRFDEETQRTFLKEVKVMRCLEHPNVLK 71
Query: 152 LVGYCADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+G D +RL + EY+ G++ + ++ W+ R+ A+D A G+AYLH
Sbjct: 72 FIGVLYKD-----KRLNFITEYIKGGTLRGIIK-SMDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-----GPSEGFTHVST-------AV 258
II RD S N L+ E N ++DFGLARL EG + V
Sbjct: 126 S---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 259 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI 292
VG + APE + + DV+S+G+ L E+I
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAV---KQLGRRGVQGHKEWMTEVNFLG 142
N+ +GEG FG K + QKV + + K L + +QG E E+++L
Sbjct: 9 NYQIVKTLGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLR 63
Query: 143 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 202
++ H +++KL DE ++V EY N D Y+ + + A R Q
Sbjct: 64 LLRHPHIIKLYDVIKSKDEI----IMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQI 116
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 262
+ Y H +I+ RD K N+LLDE N K++DFGL+ + F S G+
Sbjct: 117 ISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSP 170
Query: 263 GYAAPEYVQTGRLAA--RSDVWSYGVFLYELITGRRPID 299
YAAPE V +G+L A DVWS GV LY ++ R P D
Sbjct: 171 NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 34/222 (15%)
Query: 93 IGEGGFGCVYKG-LIKNSEDPSQKVEVAVKQLGRRGVQGH-------KEWMTEVNFLGIV 144
IG+GGFG V+KG L+K+ K VA+K L +G +E+ EV + +
Sbjct: 27 IGKGGFGLVHKGRLVKD------KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 145 EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 204
H N+VKL G + +V E++P G + L K+ I W+++L++ D A
Sbjct: 81 NHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILL---DEQWN--AKLSDFGLARLGPSEGFTHVSTAVV 259
G+ Y+ + + I+ RD +S NI L DE AK++DF L S+ H + ++
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL-----SQQSVHSVSGLL 187
Query: 260 GTMGYAAPEYV--QTGRLAARSDVWSYGVFLYELITGRRPID 299
G + APE + + ++D +S+ + LY ++TG P D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 40 LGGGQYGEVYVGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 93
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C + I V EYMP G++ YL + +T + L +A + + YL +
Sbjct: 94 LGVCTLEPPFYI----VTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 150 ---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 205
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ +SDVW++GV L+E+ T G P
Sbjct: 206 NTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 63
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G V + L S + T+
Sbjct: 64 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 120 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 167
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 168 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 227 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 63
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 64 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 120 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 167
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 168 -RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 227 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPXLREVLE 261
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 34/222 (15%)
Query: 93 IGEGGFGCVYKG-LIKNSEDPSQKVEVAVKQLGRRGVQGH-------KEWMTEVNFLGIV 144
IG+GGFG V+KG L+K+ K VA+K L +G +E+ EV + +
Sbjct: 27 IGKGGFGLVHKGRLVKD------KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 145 EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 204
H N+VKL G + +V E++P G + L K+ I W+++L++ D A
Sbjct: 81 NHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILL---DEQWN--AKLSDFGLARLGPSEGFTHVSTAVV 259
G+ Y+ + + I+ RD +S NI L DE AK++DFG S+ H + ++
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGT-----SQQSVHSVSGLL 187
Query: 260 GTMGYAAPEYV--QTGRLAARSDVWSYGVFLYELITGRRPID 299
G + APE + + ++D +S+ + LY ++TG P D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 75
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 76 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 131
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 132 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 179
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 180 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 238
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 239 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 273
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 32/285 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 19 LGGGQFGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 73 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + T + A + + APE +
Sbjct: 129 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAY 184
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
+ + +SDVW++GV L+E+ T G P P +LL+ K +R R
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------KDYRM---ERP 232
Query: 332 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 376
EG K+ + C N RP +E+ + + S+
Sbjct: 233 EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 25/211 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG+G FG V G + ++ VAVK + + ++ E + + + H NLV+L
Sbjct: 20 IGKGEFGDVMLGDYRGNK-------VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 70
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G + E+G +V EYM GS+ YL + ++L LK + D + YL EG
Sbjct: 71 LGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EG 126
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM--GYAAPEYV 270
+F + RD + N+L+ E AK+SDFGL + ST G + + APE +
Sbjct: 127 NNF--VHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEAL 177
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRPIDR 300
+ + +SDVWS+G+ L+E+ + GR P R
Sbjct: 178 REAAFSTKSDVWSFGILLWEIYSFGRVPYPR 208
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 109/211 (51%), Gaps = 27/211 (12%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNFLGIVEHQ 147
V+G G FG V+KG + E S K+ V +K + GR+ Q + M + G ++H
Sbjct: 20 VLGSGVFGTVHKG-VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI---GSLDHA 75
Query: 148 NLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDA 202
++V+L+G C G LV +Y+P GS+ ++ + + +L W +++
Sbjct: 76 HIVRLLGLCP-----GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------ 124
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 262
A+G+ YL E ++ R+ + N+LL +++DFG+A L P + + + +
Sbjct: 125 AKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 263 GYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ A E + G+ +SDVWSYGV ++EL+T
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 61
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 62 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 118 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 165
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 166 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 63
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 64 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 120 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 167
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 168 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 227 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQG 130
K +I++LK KN + +G G FG VY+G + + ++VAVK L Q
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 185
+++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 242
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 301
A+ + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 191 AQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 249
Query: 302 RPRSEQKLLQWV 313
+S Q++L++V
Sbjct: 250 --KSNQEVLEFV 259
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V G K D VAVK + + G E+ E + + H LVK
Sbjct: 16 LGSGQFGVVKLGKWKGQYD------VAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKF 68
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
G C+ + +V EY+ NG + YL + L + L++ D G+A+L
Sbjct: 69 YGVCSKE----YPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLE-- 121
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT---MGYAAPEY 269
Q I RD + N L+D K+SDFG+ R + + + VGT + ++APE
Sbjct: 122 -SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV----SSVGTKFPVKWSAPEV 176
Query: 270 VQTGRLAARSDVWSYGVFLYELIT-GRRPID 299
+ +++SDVW++G+ ++E+ + G+ P D
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 58
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 59 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 115 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 162
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 163 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQN 148
+G+G FG C Y L N+ VAVKQL G +++ E+ L +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNT-----GALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+VK G + ++ LV EY+P+G + +L R + DA+R L Y
Sbjct: 73 IVKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQ-----------RHRARLDASRLLLY 119
Query: 209 ---LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGP-SEGFTHVSTAVVG 260
+ +GM++ + + RD + NIL++ + + K++DFGLA+L P + + V
Sbjct: 120 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 179
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ + APE + + +SDVWS+GV LYEL T
Sbjct: 180 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 59
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 60 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 116 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 163
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 164 -RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 223 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 63
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 64 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 120 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 167
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 168 -RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 227 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 57
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 58 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 113
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 114 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 161
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 162 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 220
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 221 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 255
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 32/285 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 19 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 73 LGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + T + A + + APE +
Sbjct: 129 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAY 184
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
+ + +SDVW++GV L+E+ T G P P +LL+ K +R R
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------KDYRM---ERP 232
Query: 332 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 376
EG K+ + C N RP +E+ + + S+
Sbjct: 233 EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 58
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 59 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 115 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 162
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 163 -RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 61
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 62 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 118 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 165
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
A+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 166 -RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 126/293 (43%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 59
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 60 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS T
Sbjct: 116 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTT 166
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
+S GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 167 LS----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 223 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 58
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 59 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 115 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 162
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 163 -RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 58
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 59 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 115 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 162
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 163 -RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 61
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 62 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 118 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 165
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 166 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 143/328 (43%), Gaps = 48/328 (14%)
Query: 68 RPSNLKEFTIAEL---KSATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQL 123
R +LK+ +AEL K FS IG G FG VY ++NSE VA+K++
Sbjct: 34 RAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSE------VVAIKKM 87
Query: 124 GRRGVQGHKEW---MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQ 180
G Q +++W + EV FL + H N ++ G R LV EY + D
Sbjct: 88 SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL----REHTAWLVMEYCLGSASDL 143
Query: 181 ---YLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKL 237
+ P E + + A +GLAYLH +I RD K+ NILL E KL
Sbjct: 144 LEVHKKPLQEVEIA-----AVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKL 195
Query: 238 SDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPEYV---QTGRLAARSDVWSYGVFLYELIT 293
DFG A + P+ F VGT + APE + G+ + DVWS G+ EL
Sbjct: 196 GDFGSASIMAPANXF-------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 248
Query: 294 GRRPI-DRNRPRSEQKLLQWVKPYLSD---AKQFRQIVDPRLEGKYSLRLVSKLSHVANL 349
+ P+ + N + + Q P L ++ FR VD L+ R S++
Sbjct: 249 RKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308
Query: 350 CLVKNARTRPKMSEVLEMVNKIVDASAE 377
L R RP + +++++ + DA E
Sbjct: 309 VL----RERPP-TVIMDLIQRTKDAVRE 331
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQN 148
+G+G FG C Y L N+ VAVKQL G +++ E+ L +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNT-----GALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+VK G + ++ LV EY+P+G + +L R + DA+R L Y
Sbjct: 74 IVKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQ-----------RHRARLDASRLLLY 120
Query: 209 ---LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGP-SEGFTHVSTAVVG 260
+ +GM++ + + RD + NIL++ + + K++DFGLA+L P + + V
Sbjct: 121 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 180
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ + APE + + +SDVWS+GV LYEL T
Sbjct: 181 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 116/216 (53%), Gaps = 17/216 (7%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ--GHKEWMTEVNFLGIVEHQN 148
+ +G G FG V +G+ + + ++++VA+K L ++G + +E M E + +++
Sbjct: 16 IELGCGNFGSVRQGVYRMRK---KQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPY 71
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+V+L+G C + +LV E G + ++L K E I + ++ + G+ Y
Sbjct: 72 IVRLIGVCQAE-----ALMLVMEMAGGGPLHKFLVGKREEIPV-SNVAELLHQVSMGMKY 125
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + RD + N+LL + AK+SDFGL++ LG + + +A + + AP
Sbjct: 126 LEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 182
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNR 302
E + + ++RSDVWSYGV ++E ++ G++P + +
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 62
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 63 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 118
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 119 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 166
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 167 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 225
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 226 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 58
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 59 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 115 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 162
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
A+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 163 -RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQN 148
+G+G FG C Y L N+ VAVKQL G +++ E+ L +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNT-----GALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+VK G + ++ LV EY+P+G + +L R + DA+R L Y
Sbjct: 86 IVKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQ-----------RHRARLDASRLLLY 132
Query: 209 ---LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGP-SEGFTHVSTAVVG 260
+ +GM++ + + RD + NIL++ + + K++DFGLA+L P + + V
Sbjct: 133 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 192
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ + APE + + +SDVWS+GV LYEL T
Sbjct: 193 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 58
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 59 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 115 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 162
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 163 -RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLV 150
++GEG FG VY+G+ N + +K+ VAVK + +KE +M+E + ++H ++V
Sbjct: 31 ILGEGFFGEVYEGVYTNHK--GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ ++ E P G + YL ++ + L Q + +AYL
Sbjct: 89 KLIGIIEEE-----PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYLE 142
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ RD NIL+ KL DFGL+R E + S + + + +PE +
Sbjct: 143 S---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESI 198
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRPI 298
R SDVW + V ++E+++ G++P
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 32/219 (14%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
VV+G+G +G VY G D S +V +A+K++ R + + E+ ++H+N+V
Sbjct: 28 VVLGKGTYGIVYAG-----RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 82
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-------SETILTWAMRLKIAQDAA 203
+ +G + E G ++ + E +P GS+ L K +TI + ++
Sbjct: 83 QYLGSFS---ENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI------L 132
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLA-RLGPSEGFTHVSTAVVGT 261
GL YLH D QI+ RD K N+L++ K+SDFG + RL G + GT
Sbjct: 133 EGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFTGT 186
Query: 262 MGYAAPEYVQTGR--LAARSDVWSYGVFLYELITGRRPI 298
+ Y APE + G +D+WS G + E+ TG+ P
Sbjct: 187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLV 150
++GEG FG VY+G+ N + +K+ VAVK + +KE +M+E + ++H ++V
Sbjct: 15 ILGEGFFGEVYEGVYTNHK--GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ ++ E P G + YL ++ + L Q + +AYL
Sbjct: 73 KLIGIIEEE-----PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYLE 126
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ RD NIL+ KL DFGL+R E + S + + + +PE +
Sbjct: 127 S---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESI 182
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRPI 298
R SDVW + V ++E+++ G++P
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 96 GGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGI--VEHQNLVKLV 153
G FGCV+K + N VAVK +Q + W +E ++H+NL++ +
Sbjct: 26 GRFGCVWKAQLMNDF-------VAVKIFP---LQDKQSWQSEREIFSTPGMKHENLLQFI 75
Query: 154 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE-- 211
++ L+ + GS+ YL I+TW +A+ +RGL+YLHE
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSRGLSYLHEDV 132
Query: 212 ------GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSE--GFTHVSTAVVGTM 262
G I RDFKS N+LL A L+DFGLA R P + G TH VGT
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH---GQVGTR 189
Query: 263 GYAAPEYVQTG-----RLAARSDVWSYGVFLYELITGRRPID 299
Y APE ++ R D+++ G+ L+EL++ + D
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 26 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 80 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 136 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 191
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLV 150
++GEG FG VY+G+ N + +K+ VAVK + +KE +M+E + ++H ++V
Sbjct: 19 ILGEGFFGEVYEGVYTNHK--GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ ++ E P G + YL ++ + L Q + +AYL
Sbjct: 77 KLIGIIEEE-----PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYLE 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ RD NIL+ KL DFGL+R E + S + + + +PE +
Sbjct: 131 S---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESI 186
Query: 271 QTGRLAARSDVWSYGVFLYELIT-GRRPI 298
R SDVW + V ++E+++ G++P
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMT--EV 138
K+ +F V+G+G FG V+ L++ P A+K L + ++ T E
Sbjct: 24 KADPSHFELLKVLGQGSFGKVF--LVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER 81
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L V H +VKL + A E + L+ +++ G + LS E + T
Sbjct: 82 DILADVNHPFVVKL--HYAFQTEGKL--YLILDFLRGGDLFTRLS--KEVMFTEEDVKFY 135
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA- 257
+ A GL +LH II RD K NILLDE+ + KL+DFGL++ E H A
Sbjct: 136 LAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK----EAIDHEKKAY 188
Query: 258 -VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
GT+ Y APE V + +D WSYGV ++E++TG P
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L ++ +E++ E + ++H NLV+L
Sbjct: 26 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQL 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 80 LGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 136 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 191
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 75 LGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 186
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 75 LGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 186
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 126/293 (43%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY + + +K +A+K QL + GV+ + E
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYL-----AREKQRKFILALKVLFKAQLEKAGVE--HQLRRE 55
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 56 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 111
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 112 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 159
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 160 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 218
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 219 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 253
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 60
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 61 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K+++FG + PS
Sbjct: 117 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR--- 164
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 165 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 224 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L ++ +E++ E + ++H NLV+L
Sbjct: 26 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQL 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 80 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 136 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 191
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 75 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 186
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 23 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 77 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 133 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAY 188
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 22 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 76 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 132 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAY 187
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 75 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 186
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGVQG 130
+ ELK +F R +G G G V K GLI + +++ A++
Sbjct: 10 VGELKD--DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN-------- 59
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETIL 190
+ + E+ L +V G D E I E+M GS+DQ L K +
Sbjct: 60 --QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KEAKRI 111
Query: 191 TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 250
+ K++ RGLAYL E QI+ RD K SNIL++ + KL DFG++ +
Sbjct: 112 PEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQL 165
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
++ + VGT Y APE +Q + +SD+WS G+ L EL GR PI
Sbjct: 166 IDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 18/210 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL---GRRGVQGHKEWMTEVNFLGIVEHQNL 149
+G GG VY +ED ++VA+K + R + K + EV+ + HQN+
Sbjct: 19 LGGGGMSTVYL-----AEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
V ++ D DE LV EY+ ++ +Y+ +S L+ + G+ +
Sbjct: 74 VSMI----DVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHA 127
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H D +I+ RD K NIL+D K+ DFG+A+ T + V+GT+ Y +PE
Sbjct: 128 H---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQ 183
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPID 299
+ +D++S G+ LYE++ G P +
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 116/216 (53%), Gaps = 17/216 (7%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ--GHKEWMTEVNFLGIVEHQN 148
+ +G G FG V +G+ + + ++++VA+K L ++G + +E M E + +++
Sbjct: 342 IELGCGNFGSVRQGVYRMRK---KQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPY 397
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+V+L+G C + +LV E G + ++L K E I + ++ + G+ Y
Sbjct: 398 IVRLIGVCQAE-----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-ELLHQVSMGMKY 451
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + R+ + N+LL + AK+SDFGL++ LG + + +A + + AP
Sbjct: 452 LEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 508
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNR 302
E + + ++RSDVWSYGV ++E ++ G++P + +
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 23 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 77 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 133 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 188
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 59
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 60 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 116 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 163
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 164 -RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 223 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 84
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 85 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 141 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 188
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 189 -RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 248 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 34 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 87
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 88 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 144 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 199
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 200 NKFSIKSDVWAFGVLLWEIATYGMSP 225
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 123/293 (41%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 63
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G V + L S + T+
Sbjct: 64 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 120 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 167
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 168 -RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 227 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 26 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 80 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 136 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 191
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L ++ +E++ E + ++H NLV+L
Sbjct: 23 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQL 76
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 77 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 133 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 188
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L ++ +E++ E + ++H NLV+L
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQL 74
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 75 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 186
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 61
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 62 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K+++FG + PS
Sbjct: 118 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR--- 165
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 166 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 60
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 61 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 164
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 165 -RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 224 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 25 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 78
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 79 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 135 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 190
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSP 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L ++ +E++ E + ++H NLV+L
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQL 74
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 75 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 186
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 32/219 (14%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
VV+G+G +G VY G D S +V +A+K++ R + + E+ ++H+N+V
Sbjct: 14 VVLGKGTYGIVYAG-----RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 68
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-------SETILTWAMRLKIAQDAA 203
+ +G + E G ++ + E +P GS+ L K +TI + ++
Sbjct: 69 QYLGSFS---ENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI------L 118
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLA-RLGPSEGFTHVSTAVVGT 261
GL YLH D QI+ RD K N+L++ K+SDFG + RL G + GT
Sbjct: 119 EGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFTGT 172
Query: 262 MGYAAPEYVQTG--RLAARSDVWSYGVFLYELITGRRPI 298
+ Y APE + G +D+WS G + E+ TG+ P
Sbjct: 173 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM 135
+I + K ++R IG+G G VY + D + EVA++Q+ + Q KE +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAM-----DVATGQEVAIRQMNLQQ-QPKKELI 64
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR 195
+N + ++ +V Y D G + +V EY+ GS+ ++ ET +
Sbjct: 65 --INEILVMRENKNPNIVNYL-DSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQI 118
Query: 196 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARLGPSEGFTHV 254
+ ++ + L +LH Q+I RD KS NILL + KL+DFG A++ P +
Sbjct: 119 AAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---K 172
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
+ +VGT + APE V + D+WS G+ E+I G P P
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM 135
+I + K ++R IG+G G VY + D + EVA++Q+ + Q KE +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAM-----DVATGQEVAIRQMNLQQ-QPKKELI 64
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR 195
+N + ++ +V Y D G + +V EY+ GS+ ++ ET +
Sbjct: 65 --INEILVMRENKNPNIVNYL-DSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQI 118
Query: 196 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARLGPSEGFTHV 254
+ ++ + L +LH Q+I RD KS NILL + KL+DFG A++ P +
Sbjct: 119 AAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---K 172
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
+ +VGT + APE V + D+WS G+ E+I G P P
Sbjct: 173 RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM 135
+I + K ++R IG+G G VY + D + EVA++Q+ + Q KE +
Sbjct: 12 SIVSVGDPKKKYTRFEKIGQGASGTVYTAM-----DVATGQEVAIRQMNLQQ-QPKKELI 65
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR 195
+N + ++ +V Y D G + +V EY+ GS+ ++ ET +
Sbjct: 66 --INEILVMRENKNPNIVNYL-DSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQI 119
Query: 196 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARLGPSEGFTHV 254
+ ++ + L +LH Q+I RD KS NILL + KL+DFG A++ P +
Sbjct: 120 AAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---K 173
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
+ +VGT + APE V + D+WS G+ E+I G P P
Sbjct: 174 RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 222
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK---EWMTEVNFLGIVEHQNL 149
+G G FG V G E KV AVK L R+ ++ + E+ L + H ++
Sbjct: 24 LGVGTFGKVKVG---KHELTGHKV--AVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
+KL + + +V EY+ G + Y+ + RL Q G+ Y
Sbjct: 79 IKLYQVISTPSDI----FMVMEYVSGGELFDYICKNGRLDEKESRRL--FQQILSGVDYC 132
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H M ++ RD K N+LLD NAK++DFGL+ + F S G+ YAAPE
Sbjct: 133 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEV 186
Query: 270 VQTGRLAA--RSDVWSYGVFLYELITGRRPIDRNR 302
+ +GRL A D+WS GV LY L+ G P D +
Sbjct: 187 I-SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 45/282 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IGEG FG L+K++ED Q V + + R + +E EV L ++H N+V+
Sbjct: 32 IGEGSFGKAI--LVKSTEDGRQYV-IKEINISRMSSKEREESRREVAVLANMKHPNIVQ- 87
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK------SETILTWAMRLKIAQDAARGL 206
Y +E G +V +Y G + + ++ + + IL W +++ +A L
Sbjct: 88 --YRESFEENG-SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------L 138
Query: 207 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAA 266
++H D +I+ RD KS NI L + +L DFG+AR+ S ++ A +GT Y +
Sbjct: 139 KHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST--VELARACIGTPYYLS 193
Query: 267 PEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRS-EQKLLQWVKPYLSDAKQFRQ 325
PE + +SD+W+ G LYEL T + + ++ K++ P +S
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVS------- 246
Query: 326 IVDPRLEGKYSLR-LVSKLSHVANLCLVKNARTRPKMSEVLE 366
L Y LR LVS+L +N R RP ++ +LE
Sbjct: 247 -----LHYSYDLRSLVSQL-------FKRNPRDRPSVNSILE 276
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 31/229 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVK 151
IGEG FG V++ VAVK L ++ E + ++ N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKS-------------------ETI 189
L+G CA G L++EYM G ++++L SP +
Sbjct: 115 LLGVCA----VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 190 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
L+ A +L IA+ A G+AYL E + + RD + N L+ E K++DFGL+R S
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
+ + + PE + R SDVW+YGV L+E+ + G +P
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 19/238 (7%)
Query: 61 SYPSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAV 120
S P MS +P E E+ + + +G G FG V+ ++ +VAV
Sbjct: 166 SVPCMSSKPQKPWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATY------NKHTKVAV 217
Query: 121 KQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQ 180
K + + G + ++ E N + ++H LVKL + ++ E+M GS+
Sbjct: 218 KTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-----PIYIITEFMAKGSLLD 271
Query: 181 YLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDF 240
+L + + + A G+A++ + I RD +++NIL+ K++DF
Sbjct: 272 FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADF 328
Query: 241 GLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
GLAR+ +T A + + APE + G +SDVWS+G+ L E++T GR P
Sbjct: 329 GLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM 135
+I + K ++R IG+G G VY + D + EVA++Q+ + Q KE +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAM-----DVATGQEVAIRQMNLQQ-QPKKELI 64
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR 195
+N + ++ +V Y D G + +V EY+ GS+ ++ ET +
Sbjct: 65 --INEILVMRENKNPNIVNYL-DSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQI 118
Query: 196 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARLGPSEGFTHV 254
+ ++ + L +LH Q+I RD KS NILL + KL+DFG A++ P +
Sbjct: 119 AAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---K 172
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
+ +VGT + APE V + D+WS G+ E+I G P P
Sbjct: 173 RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 112/252 (44%), Gaps = 39/252 (15%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGI--VEHQNL 149
V G FGCV+K + N VAVK +Q + W E + ++H+N+
Sbjct: 31 VKARGRFGCVWKAQLLNEY-------VAVKIFP---IQDKQSWQNEYEVYSLPGMKHENI 80
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
++ +G + L+ + GS+ +L +++W IA+ ARGLAYL
Sbjct: 81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYL 137
Query: 210 HE-------GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVSTAVV 259
HE G I RD KS N+LL A ++DFGLA G S G TH V
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH---GQV 194
Query: 260 GTMGYAAPEYVQTG-----RLAARSDVWSYGVFLYELIT----GRRPIDRNRPRSEQKLL 310
GT Y APE ++ R D+++ G+ L+EL + P+D E+++
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254
Query: 311 QWVKPYLSDAKQ 322
Q P L D ++
Sbjct: 255 Q--HPSLEDMQE 264
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 61
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 62 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 118 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 165
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 166 -RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMT-----EVN 139
++F ++G+G F VY+ +E +EVA+K + ++ + +K M EV
Sbjct: 11 EDFKVGNLLGKGSFAGVYR-----AESIHTGLEVAIKMIDKKAM--YKAGMVQRVQNEVK 63
Query: 140 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 199
++H ++++L Y D + LV E NG +++YL + + R +
Sbjct: 64 IHCQLKHPSILELYNYFEDSN----YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 200 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVST 256
Q G+ YLH I+ RD SN+LL N K++DFGLA ++ + +T
Sbjct: 120 Q-IITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT---- 171
Query: 257 AVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
+ GT Y +PE SDVWS G Y L+ GR P D
Sbjct: 172 -LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 25/222 (11%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW-MTEVNF 140
S++ F + +G G + VYKGL K + V VA+K++ +G + E++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTT-----GVYVALKEVKLDSEEGTPSTAIREISL 56
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+ ++H+N+V+L ++ + LV+E+M N + +Y+ ++ + L + +
Sbjct: 57 MKELKHENIVRLYDVIHTEN----KLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVK 111
Query: 201 ----DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHV 254
+GLA+ HE +I+ RD K N+L++++ KL DFGLAR G P F
Sbjct: 112 YFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--- 165
Query: 255 STAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
S+ VV T+ Y AP+ + R + S D+WS G L E+ITG+
Sbjct: 166 SSEVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 120/283 (42%), Gaps = 39/283 (13%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVE 145
F++ IG+G FG V+KG+ ++ +QKV VA+K + ++ E+ L +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI----DNRTQKV-VAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--SETILTWAMRLKIAQDAA 203
+ K G D + I + EY+ GS L P ET + +R +
Sbjct: 64 SPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILR-----EIL 114
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
+GL YLH + I RD K++N+LL E KL+DFG+A G VGT
Sbjct: 115 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPF 169
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 323
+ APE ++ +++D+WS G+ EL G P P L+ P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------- 221
Query: 324 RQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
P LEG YS L CL K RP E+L+
Sbjct: 222 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
V+G G FG V K + + VA+KQ+ + K ++ E+ L V H N+VK
Sbjct: 15 VVGRGAFGVVCKAKWRAKD-------VAIKQIESESER--KAFIVELRQLSRVNHPNIVK 65
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYL-SPKSETILTWAMRLKIAQDAARGLAYLH 210
L G C + LV EY GS+ L + T A + ++G+AYLH
Sbjct: 66 LYGACLNP------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
+I RD K N+LL K+ DFG A + TH+ T G+ + APE
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEV 174
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPID 299
+ + + DV+S+G+ L+E+IT R+P D
Sbjct: 175 FEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 58
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 59 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 115 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 162
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 163 -RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
V+G G FG V K + + VA+KQ+ + K ++ E+ L V H N+VK
Sbjct: 16 VVGRGAFGVVCKAKWRAKD-------VAIKQIESESER--KAFIVELRQLSRVNHPNIVK 66
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYL-SPKSETILTWAMRLKIAQDAARGLAYLH 210
L G C + LV EY GS+ L + T A + ++G+AYLH
Sbjct: 67 LYGACLNP------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
+I RD K N+LL K+ DFG A + TH+ T G+ + APE
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEV 175
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPID 299
+ + + DV+S+G+ L+E+IT R+P D
Sbjct: 176 FEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 14/201 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 228 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 281
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + ++ + L +A + + YL E
Sbjct: 282 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EK 336
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+F I R+ + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 337 KNF--IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 393
Query: 273 GRLAARSDVWSYGVFLYELIT 293
+ + +SDVW++GV L+E+ T
Sbjct: 394 NKFSIKSDVWAFGVLLWEIAT 414
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 120/283 (42%), Gaps = 39/283 (13%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVE 145
F++ IG+G FG V+KG+ ++ +QKV VA+K + ++ E+ L +
Sbjct: 24 FTKLEKIGKGSFGEVFKGI----DNRTQKV-VAIKIIDLEEAEDEIEDIQQEITVLSQCD 78
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--SETILTWAMRLKIAQDAA 203
+ K G D + I + EY+ GS L P ET + +R +
Sbjct: 79 SPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILR-----EIL 129
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
+GL YLH + I RD K++N+LL E KL+DFG+A G VGT
Sbjct: 130 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPF 184
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 323
+ APE ++ +++D+WS G+ EL G P P L+ P
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------- 236
Query: 324 RQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
P LEG YS L CL K RP E+L+
Sbjct: 237 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 120/283 (42%), Gaps = 39/283 (13%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVE 145
F++ IG+G FG V+KG+ ++ +QKV VA+K + ++ E+ L +
Sbjct: 29 FTKLEKIGKGSFGEVFKGI----DNRTQKV-VAIKIIDLEEAEDEIEDIQQEITVLSQCD 83
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--SETILTWAMRLKIAQDAA 203
+ K G D + I + EY+ GS L P ET + +R +
Sbjct: 84 SPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILR-----EIL 134
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
+GL YLH + I RD K++N+LL E KL+DFG+A G VGT
Sbjct: 135 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPF 189
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 323
+ APE ++ +++D+WS G+ EL G P P L+ P
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------- 241
Query: 324 RQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
P LEG YS L CL K RP E+L+
Sbjct: 242 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQN 148
+G+G FG C Y L N+ VAVKQL G +++ E+ L +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNT-----GALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+VK G ++ LV EY+P+G + +L R + DA+R L Y
Sbjct: 70 IVKYRGVSYGPGRPELR--LVMEYLPSGCLRDFLQ-----------RHRARLDASRLLLY 116
Query: 209 ---LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGP-SEGFTHVSTAVVG 260
+ +GM++ + + RD + NIL++ + + K++DFGLA+L P + V
Sbjct: 117 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ + APE + + +SDVWS+GV LYEL T
Sbjct: 177 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 120/283 (42%), Gaps = 39/283 (13%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVE 145
F++ IG+G FG V+KG+ ++ +QKV VA+K + ++ E+ L +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI----DNRTQKV-VAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--SETILTWAMRLKIAQDAA 203
+ K G D + I + EY+ GS L P ET + +R +
Sbjct: 64 SPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILR-----EIL 114
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
+GL YLH + I RD K++N+LL E KL+DFG+A G VGT
Sbjct: 115 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPF 169
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 323
+ APE ++ +++D+WS G+ EL G P P L+ P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------- 221
Query: 324 RQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
P LEG YS L CL K RP E+L+
Sbjct: 222 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 22 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 76 LGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + T + A + + APE +
Sbjct: 132 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAY 187
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 61 SYPSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAV 120
S P MS +P E E+ + + +G G FG V+ ++ +VAV
Sbjct: 160 SVPCMSSKPQKPWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATY------NKHTKVAV 211
Query: 121 KQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQ 180
K + + G + ++ E N + ++H LVKL + ++ E+M GS+
Sbjct: 212 KTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-----PIYIITEFMAKGSLLD 265
Query: 181 YLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDF 240
+L + + + A G+A++ + I RD +++NIL+ K++DF
Sbjct: 266 FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADF 322
Query: 241 GLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
GLAR+G + + APE + G +SDVWS+G+ L E++T GR P
Sbjct: 323 GLARVGAK-----------FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTE 137
A ++F +G+G FG VY K S K +A+K QL + GV+ + E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVE--HQLRRE 61
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWA 193
V + H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 62 VEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 118 TEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 165
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 166 -RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 -----------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 26 LGGGQYGEVYEGVWKK-----YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 80 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD + N L+ E K++DFGL+RL + T + A + + APE +
Sbjct: 136 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAY 191
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
+ + +SDVW++GV L+E+ T G P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 22/202 (10%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
+ E+M GS+DQ L K + + K++ +GL YL E +I+ RD K SNI
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNI 136
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
L++ + KL DFG++ + ++ + VGT Y +PE +Q + +SD+WS G+
Sbjct: 137 LVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 288 LYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVD---PRL-EGKYSLRLVSKL 343
L E+ GR PI P + K + +P ++ + IV+ P+L G +SL +
Sbjct: 193 LVEMAVGRYPI----PPPDAK--EDSRPPMAIFELLDYIVNEPPPKLPSGVFSL----EF 242
Query: 344 SHVANLCLVKNARTRPKMSEVL 365
N CL+KN R + +++
Sbjct: 243 QDFVNKCLIKNPAERADLKQLM 264
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 14/201 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L ++ +E++ E + ++H NLV+L
Sbjct: 267 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQL 320
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL E
Sbjct: 321 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EK 375
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+F I R+ + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 376 KNF--IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 432
Query: 273 GRLAARSDVWSYGVFLYELIT 293
+ + +SDVW++GV L+E+ T
Sbjct: 433 NKFSIKSDVWAFGVLLWEIAT 453
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVE 145
F++ IG+G FG VYKG+ D K VA+K + ++ E+ L +
Sbjct: 21 FTKLDRIGKGSFGEVYKGI-----DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 75
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--SETILTWAMRLKIAQDAA 203
+ + G + + ++ EY+ GS L P ET + +R +
Sbjct: 76 SPYITRYFGSYL----KSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR-----EIL 126
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
+GL YLH + I RD K++N+LL EQ + KL+DFG+A G VGT
Sbjct: 127 KGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPF 181
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 323
+ APE ++ ++D+WS G+ EL G P P L+ P
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------- 233
Query: 324 RQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
P LEG++S CL K+ R RP E+L+
Sbjct: 234 -----PTLEGQHS----KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 14/201 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G +G VY+G+ K + VAVK L + +E++ E + ++H NLV+L
Sbjct: 225 LGGGQYGEVYEGVWK-----KYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 278
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G C R ++ E+M G++ YL + + + L +A + + YL E
Sbjct: 279 LGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EK 333
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+F I R+ + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 334 KNF--IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 390
Query: 273 GRLAARSDVWSYGVFLYELIT 293
+ + +SDVW++GV L+E+ T
Sbjct: 391 NKFSIKSDVWAFGVLLWEIAT 411
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK---EWMTEVNFLGIVEHQNL 149
+G G FG V K E +VAVK L R+ ++ + E+ L + H ++
Sbjct: 19 LGVGTFGKV-----KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
+KL + + +V EY+ G + Y+ A RL Q + Y
Sbjct: 74 IKLYQVISTPTDF----FMVMEYVSGGELFDYICKHGRVEEMEARRL--FQQILSAVDYC 127
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H M ++ RD K N+LLD NAK++DFGL+ + F S G+ YAAPE
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE- 180
Query: 270 VQTGRLAA--RSDVWSYGVFLYELITGRRPID 299
V +GRL A D+WS GV LY L+ G P D
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+GEG +G VYK + K + VA+KQ+ +E + E++ + + ++VK
Sbjct: 37 LGEGSYGSVYKAIHKETGQI-----VAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKY 89
Query: 153 VG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G Y + D +V EY GSV + +++T LT I Q +GL YLH
Sbjct: 90 YGSYFKNTD-----LWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLEYLHF 143
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
+ I RD K+ NILL+ + +AKL+DFG+A G V+GT + APE +Q
Sbjct: 144 ---MRKIHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQ 198
Query: 272 TGRLAARSDVWSYGVFLYELITGRRP 297
+D+WS G+ E+ G+ P
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 17/231 (7%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
K + ++F +G G FG V+ LI++ + +K+ ++ + E
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVH--LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM 59
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L IV H ++++ G D Q ++ +Y+ G + L KS+ + A
Sbjct: 60 LSIVTHPFIIRMWGTFQD----AQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKF-YAA 113
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 260
+ L YLH II RD K NILLD+ + K++DFG A+ P V+ + G
Sbjct: 114 EVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCG 165
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLL 310
T Y APE V T D WS+G+ +YE++ G P D N ++ +K+L
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 19/228 (8%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMT 136
I + K ++R IG+G G VY + D + EVA++Q+ + Q KE +
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAM-----DVATGQEVAIRQMNLQQ-QPKKELI- 65
Query: 137 EVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 196
+N + ++ +V Y D G + +V EY+ GS+ ++ ET +
Sbjct: 66 -INEILVMRENKNPNIVNYL-DSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIA 120
Query: 197 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARLGPSEGFTHVS 255
+ ++ + L +LH Q+I R+ KS NILL + KL+DFG A++ P +
Sbjct: 121 AVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KR 174
Query: 256 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
+ +VGT + APE V + D+WS G+ E+I G P P
Sbjct: 175 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 222
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 36/302 (11%)
Query: 75 FTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-E 133
F E + A + + S +G+G FG VY+G+ K + VA+K + + E
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-- 188
++ E + + ++V+L+G + +G L++ E M G + YL P+ E
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 189 IL---TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 245
+L + + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 246 GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRS 305
+ + + + +PE ++ G SDVWS+GV L+E+ T +
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LA 228
Query: 306 EQKLLQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSE 363
EQ PY LS+ + R +++ L K L + +C N + RP E
Sbjct: 229 EQ-------PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLE 280
Query: 364 VL 365
++
Sbjct: 281 II 282
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQ--KVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNL 149
V+G+GG+G V++ + + ++V K + R + E N L V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
V L+ Y + G + L+ EY+ G + ++ + E I + + L +L
Sbjct: 84 VDLI-YAF---QTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H+ II RD K NI+L+ Q + KL+DFGL + +G V+ GT+ Y APE
Sbjct: 138 HQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHTFCGTIEYMAPEI 192
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQW---VKPYLS 318
+ D WS G +Y+++TG P NR ++ K+L+ + PYL+
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLT 245
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V+ ++ +VAVK + + G + ++ E N + ++H LVKL
Sbjct: 23 LGAGQFGEVWMATY------NKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKL 75
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ E+M GS+ +L + + + A G+A++ +
Sbjct: 76 HAVVTKE-----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
I RD +++NIL+ K++DFGLAR+ +T A + + APE +
Sbjct: 131 ---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINF 186
Query: 273 GRLAARSDVWSYGVFLYELIT-GRRP 297
G +SDVWS+G+ L E++T GR P
Sbjct: 187 GSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 134/308 (43%), Gaps = 45/308 (14%)
Query: 85 KNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNF 140
K FS IG G FG VY ++NSE VA+K++ G Q +++W + EV F
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSE------VVAIKKMSYSGKQSNEKWQDIIKEVRF 68
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQ---YLSPKSETILTWAMRLK 197
L + H N ++ G R LV EY + D + P E +
Sbjct: 69 LQKLRHPNTIQYRGCYL----REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----A 119
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVST 256
+ A +GLAYLH +I RD K+ NILL E KL DFG A + P+ F
Sbjct: 120 VTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF----- 171
Query: 257 AVVGTMGYAAPEYV---QTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQW 312
VGT + APE + G+ + DVWS G+ EL + P+ + N + + Q
Sbjct: 172 --VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 229
Query: 313 VKPYLSD---AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVN 369
P L ++ FR VD L+ R S++ L R RP + +++++
Sbjct: 230 ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL----RERPP-TVIMDLIQ 284
Query: 370 KIVDASAE 377
+ DA E
Sbjct: 285 RTKDAVRE 292
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 131/284 (46%), Gaps = 22/284 (7%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVE 145
F++ IG+G FG V+KG+ ++ +Q+V VA+K + ++ E+ L +
Sbjct: 25 FTKLERIGKGSFGEVFKGI----DNRTQQV-VAIKIIDLEEAEDEIEDIQQEITVLSQCD 79
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
+ K G +G + ++ EY+ GS L A LK + +G
Sbjct: 80 SSYVTKYYGSYL----KGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKG 132
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 265
L YLH + I RD K++N+LL EQ + KL+DFG+A G VGT +
Sbjct: 133 LDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWM 187
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP--YLSD-AKQ 322
APE +Q +++D+WS G+ EL G P P L+ P + D K
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKS 247
Query: 323 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
F++ +D L S R +K + + +VKN++ ++E+++
Sbjct: 248 FKEFIDACLNKDPSFRPTAK-ELLKHKFIVKNSKKTSYLTELID 290
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQ--KVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNL 149
V+G+GG+G V++ + + ++V K + R + E N L V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
V L+ Y + G + L+ EY+ G + ++ + E I + + L +L
Sbjct: 84 VDLI-YAF---QTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H+ II RD K NI+L+ Q + KL+DFGL + +G V+ GT+ Y APE
Sbjct: 138 HQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHXFCGTIEYMAPEI 192
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQW---VKPYLS 318
+ D WS G +Y+++TG P NR ++ K+L+ + PYL+
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLT 245
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 24/212 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG---HKEWMTEVNFLGIVEHQNL 149
+GEG FG V K + + +VA+K + R+ ++ H E+++L ++ H ++
Sbjct: 17 LGEGSFGKV-----KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHI 71
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
+KL + ++V EY G + Y+ K +T + Q + Y
Sbjct: 72 IKLYDVITTPTDI----VMVIEY-AGGELFDYIVEKKR--MTEDEGRRFFQQIICAIEYC 124
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H +I+ RD K N+LLD+ N K++DFGL+ + F S G+ YAAPE
Sbjct: 125 HR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE- 177
Query: 270 VQTGRLAA--RSDVWSYGVFLYELITGRRPID 299
V G+L A DVWS G+ LY ++ GR P D
Sbjct: 178 VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK---EWMTEVNFLGIVEHQNL 149
+G G FG V K E +VAVK L R+ ++ + E+ L + H ++
Sbjct: 19 LGVGTFGKV-----KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
+KL + + +V EY+ G + Y+ A RL Q + Y
Sbjct: 74 IKLYQVISTPTDF----FMVMEYVSGGELFDYICKHGRVEEMEARRL--FQQILSAVDYC 127
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H M ++ RD K N+LLD NAK++DFGL+ + F S G+ YAAPE
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE- 180
Query: 270 VQTGRLAA--RSDVWSYGVFLYELITGRRPID 299
V +GRL A D+WS GV LY L+ G P D
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 122
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 13 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 68 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 120
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 121 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 36/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTE 137
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET--IL-- 190
+ + ++V+L+G + +G L++ E M G + YL P+ E +L
Sbjct: 79 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 134
Query: 191 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 239
Query: 310 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 240 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 36/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTE 137
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET--IL-- 190
+ + ++V+L+G + +G L++ E M G + YL P+ E +L
Sbjct: 66 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 191 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 226
Query: 310 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 227 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 36/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTE 137
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET--IL-- 190
+ + ++V+L+G + +G L++ E M G + YL P+ E +L
Sbjct: 72 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 191 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 232
Query: 310 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 233 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLVK 151
+G GGFG V + + +++ + +VA+KQ + ++E W E+ + + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGE-----QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 152 LVGYCADDDERGIQRL-------LVYEYMPNGSVDQYLSPKSETI-LTWAMRLKIAQDAA 203
A + G+Q+L L EY G + +YL+ L + D +
Sbjct: 77 -----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLD---EQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
L YLHE +II RD K NI+L ++ K+ D G A+ L E + T V
Sbjct: 132 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----LCTEFV 184
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRN 301
GT+ Y APE ++ + D WS+G +E ITG RP N
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 36/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTE 137
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET--IL-- 190
+ + ++V+L+G + +G L++ E M G + YL P+ E +L
Sbjct: 72 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 191 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 232
Query: 310 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 233 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLVK 151
+G GGFG V + + +++ + +VA+KQ + ++E W E+ + + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGE-----QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 152 LVGYCADDDERGIQRL-------LVYEYMPNGSVDQYLSPKSETI-LTWAMRLKIAQDAA 203
A + G+Q+L L EY G + +YL+ L + D +
Sbjct: 78 -----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLD---EQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 259
L YLHE +II RD K NI+L ++ K+ D G A+ L E + T V
Sbjct: 133 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----LCTEFV 185
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRN 301
GT+ Y APE ++ + D WS+G +E ITG RP N
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 122
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 122
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 122
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 122
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 122
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 137/303 (45%), Gaps = 36/303 (11%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTE 137
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET--IL-- 190
+ + ++V+L+G + +G L++ E M G + YL P+ E +L
Sbjct: 73 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 191 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 185
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 233
Query: 310 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEM 367
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 234 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISS 287
Query: 368 VNK 370
+ +
Sbjct: 288 IKE 290
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
AT + IG G +G VYK + DP VA+K + G G+ + EV
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK-----ARDPHSGHFVALKSVRVPNGEEGLP--ISTVREV 54
Query: 139 NFL---GIVEHQNLVKLVGYCADD-DERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAM 194
L EH N+V+L+ CA +R I+ LV+E++ + + YL L
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAET 113
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ + RGL +LH I+ RD K NIL+ KL+DFGLAR+ +
Sbjct: 114 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMA 167
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
VV T+ Y APE + A D+WS G E+ R+P+
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 122
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 122
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 36/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTE 137
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET--IL-- 190
+ + ++V+L+G + +G L++ E M G + YL P+ E +L
Sbjct: 64 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 119
Query: 191 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
+ + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 224
Query: 310 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 225 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++GEG FG V +G +K + S KV V +L + +E+++E + H N+++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 152 LVGYCADDDERGIQR-LLVYEYMPNGSVDQYL-------SPKSETILTWAMRLKIAQDAA 203
L+G C + +GI + +++ +M G + YL PK + T LK D A
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL---LKFMVDIA 157
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
G+ YL + + RD + N +L + ++DFGL++ S + +
Sbjct: 158 LGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ A E + ++SDVW++GV ++E+ T
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 36/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTE 137
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET--IL-- 190
+ + ++V+L+G + +G L++ E M G + YL P+ E +L
Sbjct: 101 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 156
Query: 191 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 261
Query: 310 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 262 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 36/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTE 137
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET--IL-- 190
+ + ++V+L+G + +G L++ E M G + YL P+ E +L
Sbjct: 73 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 191 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
+ + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 233
Query: 310 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 234 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG +G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
AT + IG G +G VYK + DP VA+K + G G+ + EV
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK-----ARDPHSGHFVALKSVRVPNGEEGLP--ISTVREV 54
Query: 139 NFL---GIVEHQNLVKLVGYCADD-DERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAM 194
L EH N+V+L+ CA +R I+ LV+E++ + + YL L
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAET 113
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ + RGL +LH I+ RD K NIL+ KL+DFGLAR+ +
Sbjct: 114 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMA 167
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
VV T+ Y APE + A D+WS G E+ R+P+
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 36/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTE 137
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETIL-- 190
+ + ++V+L+G + +G L++ E M G + YL + + +L
Sbjct: 79 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134
Query: 191 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 239
Query: 310 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 240 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE---WMTEVN 139
NF V+G+G FG V +K + D AVK L + + + MTE
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGD-----LYAVKVLKKDVILQDDDVECTMTEKR 75
Query: 140 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 199
L + + + + C +R V E++ G + ++ KS R A
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDR---LFFVMEFVNGGDLMFHIQ-KSRRFDEARARF-YA 130
Query: 200 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
+ L +LH D II RD K N+LLD + + KL+DFG+ + G G T +
Sbjct: 131 AEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFC 185
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
GT Y APE +Q D W+ GV LYE++ G P +
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 36/303 (11%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTE 137
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETIL-- 190
+ + ++V+L+G + +G L++ E M G + YL + + +L
Sbjct: 69 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 124
Query: 191 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 229
Query: 310 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEM 367
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 230 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISS 283
Query: 368 VNK 370
+ +
Sbjct: 284 IKE 286
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 50/299 (16%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGVQG 130
+ ELK +F + +G G G V+K GL+ + +++ A++
Sbjct: 19 VGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-------- 68
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS---E 187
+ + E+ L +V G D E I E+M GS+DQ L E
Sbjct: 69 --QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKKAGRIPE 122
Query: 188 TILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGP 247
IL K++ +GL YL E +I+ RD K SNIL++ + KL DFG++
Sbjct: 123 QILG-----KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---- 171
Query: 248 SEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 307
+ ++ + VGT Y +PE +Q + +SD+WS G+ L E+ GR PI
Sbjct: 172 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSG--SGSM 229
Query: 308 KLLQWVKPYLSDAKQFRQIVDPRL-EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
+ + + +++ P+L G +SL + N CL+KN R + +++
Sbjct: 230 AIFELLDYIVNEPP-------PKLPSGVFSL----EFQDFVNKCLIKNPAERADLKQLM 277
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 99/225 (44%), Gaps = 22/225 (9%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMT-----E 137
AT + IG G +G VYK + DP VA+K + G + E
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYK-----ARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE 61
Query: 138 VNFL---GIVEHQNLVKLVGYCADD-DERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
V L EH N+V+L+ CA +R I+ LV+E++ + + YL L
Sbjct: 62 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE 120
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
+ + RGL +LH I+ RD K NIL+ KL+DFGLAR+ +
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQM 174
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
T VV T+ Y APE + A D+WS G E+ R+P+
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
AT + IG G +G VYK + DP VA+K + G G+ + EV
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK-----ARDPHSGHFVALKSVRVPNGEEGLP--ISTVREV 54
Query: 139 NFL---GIVEHQNLVKLVGYCADD-DERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAM 194
L EH N+V+L+ CA +R I+ LV+E++ + + YL L
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAET 113
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ + RGL +LH I+ RD K NIL+ KL+DFGLAR+ +
Sbjct: 114 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMA 167
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
VV T+ Y APE + A D+WS G E+ R+P+
Sbjct: 168 LFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 36/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTE 137
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET--IL-- 190
+ + ++V+L+G + +G L++ E M G + YL P+ E +L
Sbjct: 66 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 191 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ + +++A + A G+AYL+ + + RD + N + E + K+ DFG+ R
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 226
Query: 310 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 227 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 31/233 (13%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE--- 133
I L+ +++ VIG G FG V L+++ SQKV A+K L + + +
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQ--LVRHK--ASQKV-YAMKLLSKFEMIKRSDSAF 121
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
+ E + + +V+L +CA D++ + +V EYMP G + +S + WA
Sbjct: 122 FWEERDIMAFANSPWVVQL--FCAFQDDKYL--YMVMEYMPGGDLVNLMS-NYDVPEKWA 176
Query: 194 ----MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ +A DA + +H RD K N+LLD+ + KL+DFG
Sbjct: 177 KFYTAEVVLALDAIHSMGLIH---------RDVKPDNMLLDKHGHLKLADFGTCMKMDET 227
Query: 250 GFTHVSTAVVGTMGYAAPEYVQT----GRLAARSDVWSYGVFLYELITGRRPI 298
G H TA VGT Y +PE +++ G D WS GVFL+E++ G P
Sbjct: 228 GMVHCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG-RRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+GEG G V + + +E+ VAVK + +R V + E+ ++ H+N+VK
Sbjct: 14 LGEGAAGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH- 121
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 272 TGRLAARS-DVWSYGVFLYELITGRRPIDR 300
A DVWS G+ L ++ G P D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTEVN 139
++F +G+G FG VY + S K +A+K QL + GV+ + EV
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAGVE--HQLRREVE 64
Query: 140 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 195
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 65 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 196 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 255
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 121 L------ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----R 167
Query: 256 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
T + GT+ Y PE ++ + D+WS GV YE + G P +
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 86/178 (48%), Gaps = 29/178 (16%)
Query: 197 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSEGFTHVS 255
KI + L +L E + +II RD K SNILLD N KL DFG++ +L S
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA----K 182
Query: 256 TAVVGTMGYAAPEYVQTGR----LAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 311
T G Y APE + RSDVWS G+ LYEL TGR P + +Q L Q
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-LTQ 241
Query: 312 WVK---PYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
VK P LS+++ E ++S + + NLCL K+ RPK E+L+
Sbjct: 242 VVKGDPPQLSNSE----------EREFSPSFI----NFVNLCLTKDESKRPKYKELLK 285
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIK--NSEDPSQKVEVAVKQLGRRGVQGHKEWMTEV 138
K+ F V+G+G FG V+ L+K + D Q + V + V+ E
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 77
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L V H +VKL + A E + L+ +++ G + LS E + T
Sbjct: 78 DILVEVNHPFIVKL--HYAFQTEGKL--YLILDFLRGGDLFTRLS--KEVMFTEEDVKFY 131
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA- 257
+ A L +LH II RD K NILLDE+ + KL+DFGL++ E H A
Sbjct: 132 LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAY 184
Query: 258 -VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
GT+ Y APE V +D WS+GV ++E++TG P
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 37 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 91
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL +C DDE+ L Y NG + +Y+ K + R A+
Sbjct: 92 SRLDHPFFVKLY-FCFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAE- 145
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 146 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH--KE 133
T A+ + N+ IG+G F V K + EVAVK + + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQK 59
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
EV + ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIMKVLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 254 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 299
A G YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIK--NSEDPSQKVEVAVKQLGRRGVQGHKEWMTEV 138
K+ F V+G+G FG V+ L+K + D Q + V + V+ E
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 77
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L V H +VKL + A E + L+ +++ G + LS E + T
Sbjct: 78 DILVEVNHPFIVKL--HYAFQTEGKLY--LILDFLRGGDLFTRLS--KEVMFTEEDVKFY 131
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA- 257
+ A L +LH II RD K NILLDE+ + KL+DFGL++ E H A
Sbjct: 132 LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAY 184
Query: 258 -VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
GT+ Y APE V +D WS+GV ++E++TG P
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGVQG 130
+ ELK +F + +G G G V+K GL+ + +++ A++
Sbjct: 62 VGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-------- 111
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETIL 190
+ + E+ L +V G D E I E+M GS+DQ L K +
Sbjct: 112 --QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KKAGRI 163
Query: 191 TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 250
+ K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 164 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQL 217
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
++ + VGT Y +PE +Q + +SD+WS G+ L E+ GR PI
Sbjct: 218 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 26/245 (10%)
Query: 67 QRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR 126
+ + LKE +++ ++ + +GE FG VYKG + Q VA+K L +
Sbjct: 15 HKQAKLKEISLSAVRFMEE-------LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK 67
Query: 127 GVQG--HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-- 182
+G +E+ E ++H N+V L+G D +++ Y +G + ++L
Sbjct: 68 A-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS----MIFSYCSHGDLHEFLVM 122
Query: 183 -SPKSETILTWAMR-LKIA---QDAARGLAYLHEGMDF----QIIVRDFKSSNILLDEQW 233
SP S+ T R +K A D +A + GM++ ++ +D + N+L+ ++
Sbjct: 123 RSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL 182
Query: 234 NAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
N K+SD GL R + + + + + + APE + G+ + SD+WSYGV L+E+ +
Sbjct: 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
Query: 294 -GRRP 297
G +P
Sbjct: 243 YGLQP 247
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIK--NSEDPSQKVEVAVKQLGRRGVQGHKEWMTEV 138
K+ F V+G+G FG V+ L+K + D Q + V + V+ E
Sbjct: 21 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 78
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L V H +VKL + A E + L+ +++ G + LS E + T
Sbjct: 79 DILVEVNHPFIVKL--HYAFQTEGKLY--LILDFLRGGDLFTRLS--KEVMFTEEDVKFY 132
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA- 257
+ A L +LH II RD K NILLDE+ + KL+DFGL++ E H A
Sbjct: 133 LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAY 185
Query: 258 -VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
GT+ Y APE V +D WS+GV ++E++TG P
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 35/224 (15%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P++ +VAVK L + + ++E+ + ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 195
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 196 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR H+
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHI 203
Query: 255 STAVVGTMG-----YAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
T G + APE + +SDVWS+GV L+E+ T
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 109/229 (47%), Gaps = 47/229 (20%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF--LGIVEHQNL 149
+IG G +G VYKG + E P VAVK + ++ E N + ++EH N+
Sbjct: 20 LIGRGRYGAVYKGSL--DERP-----VAVKVFS---FANRQNFINEKNIYRVPLMEHDNI 69
Query: 150 VK-LVGYCADDDER-----GIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+ +VG DER ++ LLV EY PNGS+ +YLS + W ++A
Sbjct: 70 ARFIVG-----DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVT 121
Query: 204 RGLAYLH----EGMDFQ--IIVRDFKSSNILLDEQWNAKLSDFGLA------RLGPSEGF 251
RGLAYLH G ++ I RD S N+L+ +SDFGL+ RL
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE 181
Query: 252 THVSTAVVGTMGYAAPEYVQTGRLAARS--------DVWSYGVFLYELI 292
+ + + VGT+ Y APE ++ G + R D+++ G+ +E+
Sbjct: 182 DNAAISEVGTIRYMAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGVQG 130
+ ELK +F + +G G G V+K GL+ + +++ A++
Sbjct: 27 VGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-------- 76
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETIL 190
+ + E+ L +V G D E I E+M GS+DQ L K +
Sbjct: 77 --QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KKAGRI 128
Query: 191 TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 250
+ K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 129 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQL 182
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
++ + VGT Y +PE +Q + +SD+WS G+ L E+ GR PI
Sbjct: 183 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 32/233 (13%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGI 143
KN +GEG FG V K + + + VAVK L ++ ++E N L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK------------------ 185
V H +++KL G C+ D LL+ EY GS+ +L
Sbjct: 83 VNHPHVIKLYGACSQDGPL----LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 186 ----SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
E LT + A ++G+ YL E +++ RD + NIL+ E K+SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 242 LAR-LGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
L+R + + + S + + + A E + +SDVWS+GV L+E++T
Sbjct: 196 LSRDVYEEDSYVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG--HKEWMTEVNFLGIVEHQNLV 150
+GE FG VYKG + Q VA+K L + +G +E+ E ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVV 75
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKSETILTWAMR-LKIA---QDAA 203
L+G D +++ Y +G + ++L SP S+ T R +K A D
Sbjct: 76 CLLGVVTKDQPLS----MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 204 RGLAYLHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
+A + GM++ ++ +D + N+L+ ++ N K+SD GL R + + + +
Sbjct: 132 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
+ + APE + G+ + SD+WSYGV L+E+ + G +P
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 127/306 (41%), Gaps = 39/306 (12%)
Query: 71 NLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKG-LIKNSEDPSQKVEVAVKQLGRRGVQ 129
+L E ++ L+ F ++G G +G VYKG +K + A+K + G +
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQ------LAAIKVMDVTGDE 63
Query: 130 GHKEWMTEVNFLG-IVEHQNLVKLVGYCADDDERGI--QRLLVYEYMPNGSVDQYLSPKS 186
+E E+N L H+N+ G + G+ Q LV E+ GSV +
Sbjct: 64 -EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 122
Query: 187 ETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARL 245
L I ++ RGL++LH+ ++I RD K N+LL E KL DFG+ A+L
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
Query: 246 GPSEGFTHVSTAVVGTMGYAAPEYVQT-----GRLAARSDVWSYGVFLYELITGRRPIDR 300
+ G +GT + APE + +SD+WS G+ E+ G P+
Sbjct: 180 DRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236
Query: 301 NRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPK 360
P L+ + PRL+ K + K CLVKN RP
Sbjct: 237 MHPMRALFLIP-------------RNPAPRLKSK---KWSKKFQSFIESCLVKNHSQRPA 280
Query: 361 MSEVLE 366
++++
Sbjct: 281 TEQLMK 286
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P++ +VAVK L + + ++E+ + ++ +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 195
++ L+G C D + + EY G++ +YL + L +
Sbjct: 81 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 196 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 137 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH--KE 133
T A+ + N+ IG+G F V K + EVAVK + + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQK 59
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
EV + ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIMKVLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 254 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 299
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P++ +VAVK L + + ++E+ + ++ +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 195
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 85 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 196 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 141 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH--KE 133
T A+ + N+ IG+G F V K + EVAVK + + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQK 59
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
EV + ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIMKVLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 254 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 299
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 117/267 (43%), Gaps = 30/267 (11%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE---WMTEVN-FL 141
+F VIG+G FG V K +++V AVK L ++ + KE M+E N L
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHK-----AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
V+H LV L D + V +Y+ G + +L + L R A +
Sbjct: 94 KNVKHPFLVGLHFSFQTAD----KLYFVLDYINGGELFYHLQ-RERCFLEPRARF-YAAE 147
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST--AVV 259
A L YLH I+ RD K NILLD Q + L+DFGL + E H ST
Sbjct: 148 IASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK----ENIEHNSTTSTFC 200
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQ---WVKP 315
GT Y APE + D W G LYE++ G P RN +L +KP
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP 260
Query: 316 YLSDAKQFRQIVDPRLEGKYSLRLVSK 342
++++ R +++ L+ + RL +K
Sbjct: 261 NITNSA--RHLLEGLLQKDRTKRLGAK 285
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 149 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 205 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P++ +VAVK L + + ++E+ + ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 195
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 196 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 31/233 (13%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE--- 133
I +L+ +++ VIG G FG V L+++ S + A+K L + + +
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHK---STRKVYAMKLLSKFEMIKRSDSAF 115
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
+ E + + +V+L + A D+R + +V EYMP G + +S + WA
Sbjct: 116 FWEERDIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMS-NYDVPEKWA 170
Query: 194 ----MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ +A DA + ++H RD K N+LLD+ + KL+DFG E
Sbjct: 171 RFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221
Query: 250 GFTHVSTAVVGTMGYAAPEYVQT----GRLAARSDVWSYGVFLYELITGRRPI 298
G TA VGT Y +PE +++ G D WS GVFLYE++ G P
Sbjct: 222 GMVRCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P++ +VAVK L + + ++E+ + ++ +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 195
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 89 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 196 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 145 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 38/264 (14%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLG- 142
+N V+G G FG V ++VAVK L + +E M+E+ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 143 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSE--------------- 187
+ H+N+V L+G C L++EY G + YL K E
Sbjct: 105 LGSHENIVNLLGACTLSG----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 188 ------TILTWAMRLKIAQDAARGLAYLHEGMDFQIIV-RDFKSSNILLDEQWNAKLSDF 240
+LT+ L A A+G+ +L +F+ V RD + N+L+ K+ DF
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFL----EFKSCVHRDLAARNVLVTHGKVVKICDF 216
Query: 241 GLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRR--- 296
GLAR S+ V + + APE + G +SDVWSYG+ L+E+ + G
Sbjct: 217 GLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276
Query: 297 --PIDRNRPRSEQKLLQWVKPYLS 318
P+D N + Q + +P+ +
Sbjct: 277 GIPVDANFYKLIQNGFKMDQPFYA 300
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P++ +VAVK L + + ++E+ + ++ +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 195
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 88 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 196 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 144 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ-GHKEWMTEVNFLGIVEHQNLV 150
VIG G +++ + +K +VA+K++ Q E + E+ + H N+V
Sbjct: 22 VIGSGA-----TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSV---DQYLSPKSET---ILTWAMRLKIAQDAAR 204
DE LV + + GSV +++ K E +L + I ++
Sbjct: 77 SYYTSFVVKDEL----WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG---FTHVSTAVVGT 261
GL YLH+ I RD K+ NILL E + +++DFG++ + G V VGT
Sbjct: 133 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 262 MGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL-LQWVKPYLSD 319
+ APE ++ R ++D+WS+G+ EL TG P + P L LQ P L
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
Q ++++ + GK +++S LCL K+ RP +E+L
Sbjct: 250 GVQDKEML--KKYGKSFRKMIS-------LCLQKDPEKRPTAAELL 286
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVK 151
+G+G FG VY+G ++ + VAVK + ++ E++ E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 203
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
G+AYL+ + + RD + N ++ + K+ DFG+ R + + +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY--LSDAK 321
+ APE ++ G SD+WS+GV L+E+ + +EQ PY LS+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQ 240
Query: 322 QFRQIVDPRLEGKY---SLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 373
+ ++D G Y +++ + +C N + RP LE+VN + D
Sbjct: 241 VLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF---LEIVNLLKD 288
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGI 143
KN +GEG FG V K + + + VAVK L ++ ++E N L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK------------------ 185
V H +++KL G C+ D LL+ EY GS+ +L
Sbjct: 83 VNHPHVIKLYGACSQDGPL----LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 186 ----SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
E LT + A ++G+ YL E +++ RD + NIL+ E K+SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
L+R E + + + A E + +SDVWS+GV L+E++T
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P++ +VAVK L + + ++E+ + ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 195
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 196 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGVQGHKEWMTEVN 139
++F +G+G FG VY + S K +A+K QL + GV+ + EV
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAGVE--HQLRREVE 64
Query: 140 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 195
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 65 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 196 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 255
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 121 L------ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----R 167
Query: 256 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
+ GT+ Y PE ++ + D+WS GV YE + G P +
Sbjct: 168 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 54/301 (17%)
Query: 75 FTIAELKSATKNFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGV 128
+ ELK +F + +G G G V+K GL+ + +++ A++
Sbjct: 1 MALGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------ 52
Query: 129 QGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSET 188
+ + E+ L +V G D E I E+M GS+DQ L K
Sbjct: 53 ----QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KKAG 102
Query: 189 ILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPS 248
+ + K++ +GL YL E +I+ RD K SNIL++ + KL DFG++
Sbjct: 103 RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----G 156
Query: 249 EGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQK 308
+ ++ VGT Y +PE +Q + +SD+WS G+ L E+ GR P P + +
Sbjct: 157 QLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFE 213
Query: 309 LLQWV----KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
LL ++ P L A +SL + N CL+KN R + ++
Sbjct: 214 LLDYIVNEPPPKLPSA-------------VFSL----EFQDFVNKCLIKNPAERADLKQL 256
Query: 365 L 365
+
Sbjct: 257 M 257
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ-GHKEWMTEVNFLGIVEHQNLV 150
VIG G +++ + +K +VA+K++ Q E + E+ + H N+V
Sbjct: 17 VIGSGA-----TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSV---DQYLSPKSET---ILTWAMRLKIAQDAAR 204
DE LV + + GSV +++ K E +L + I ++
Sbjct: 72 SYYTSFVVKDEL----WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG---FTHVSTAVVGT 261
GL YLH+ I RD K+ NILL E + +++DFG++ + G V VGT
Sbjct: 128 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 262 MGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL-LQWVKPYLSD 319
+ APE ++ R ++D+WS+G+ EL TG P + P L LQ P L
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 244
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
Q ++++ + GK +++S LCL K+ RP +E+L
Sbjct: 245 GVQDKEML--KKYGKSFRKMIS-------LCLQKDPEKRPTAAELL 281
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 31/233 (13%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE--- 133
I +L+ +++ VIG G FG V L+++ S + A+K L + + +
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHK---STRKVYAMKLLSKFEMIKRSDSAF 120
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
+ E + + +V+L + A D+R + +V EYMP G + +S + WA
Sbjct: 121 FWEERDIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMS-NYDVPEKWA 175
Query: 194 ----MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ +A DA + ++H RD K N+LLD+ + KL+DFG E
Sbjct: 176 RFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKE 226
Query: 250 GFTHVSTAVVGTMGYAAPEYVQT----GRLAARSDVWSYGVFLYELITGRRPI 298
G TA VGT Y +PE +++ G D WS GVFLYE++ G P
Sbjct: 227 GMVRCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
+ E+M GS+DQ L K + + K++ +GL YL E +I+ RD K SNI
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNI 136
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
L++ + KL DFG++ + ++ + VGT Y +PE +Q + +SD+WS G+
Sbjct: 137 LVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 288 LYELITGRRPI 298
L E+ GR PI
Sbjct: 193 LVEMAVGRYPI 203
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLGIVEHQNLVK 151
+GEG + VYKG K +++ VA+K++ +G + EV+ L ++H N+V
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-----VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVT 64
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
L + E+ + LV+EY+ + + QYL I ++L + Q RGLAY H
Sbjct: 65 L--HDIIHTEKSLT--LVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQ-LLRGLAYCHR 118
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE-YV 270
+++ RD K N+L++E+ KL+DFGLAR T+ + V T+ Y P+ +
Sbjct: 119 Q---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILL 173
Query: 271 QTGRLAARSDVWSYGVFLYELITGR 295
+ + + D+W G YE+ TGR
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P++ +VAVK L + + ++E+ + ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 195
++ L+G C D + + EY G++ +YL + L +
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 196 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
+ E+M GS+DQ L K + + K++ +GL YL E +I+ RD K SNI
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNI 136
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
L++ + KL DFG++ + ++ + VGT Y +PE +Q + +SD+WS G+
Sbjct: 137 LVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 288 LYELITGRRPI 298
L E+ GR PI
Sbjct: 193 LVEMAVGRYPI 203
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
+ E+M GS+DQ L K + + K++ +GL YL E +I+ RD K SNI
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNI 136
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
L++ + KL DFG++ + ++ + VGT Y +PE +Q + +SD+WS G+
Sbjct: 137 LVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 288 LYELITGRRPI 298
L E+ GR PI
Sbjct: 193 LVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
+ E+M GS+DQ L K + + K++ +GL YL E +I+ RD K SNI
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNI 136
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
L++ + KL DFG++ + ++ + VGT Y +PE +Q + +SD+WS G+
Sbjct: 137 LVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 288 LYELITGRRPI 298
L E+ GR PI
Sbjct: 193 LVEMAVGRYPI 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IITLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IIHLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 31/233 (13%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE--- 133
I +L+ +++ VIG G FG V L+++ S + A+K L + + +
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHK---STRKVYAMKLLSKFEMIKRSDSAF 120
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
+ E + + +V+L + A D+R + +V EYMP G + +S + WA
Sbjct: 121 FWEERDIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMS-NYDVPEKWA 175
Query: 194 ----MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+ +A DA + ++H RD K N+LLD+ + KL+DFG E
Sbjct: 176 RFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKE 226
Query: 250 GFTHVSTAVVGTMGYAAPEYVQT----GRLAARSDVWSYGVFLYELITGRRPI 298
G TA VGT Y +PE +++ G D WS GVFLYE++ G P
Sbjct: 227 GMVRCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH--KE 133
T A+ + N+ IG+G F V K + EVAVK + + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQK 59
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
EV ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIXKVLNHPNIVKL--FEVIETEKTL--YLVXEYASGGEVFDYLVAHGRXKEKEA 115
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSN---EFTFGN 167
Query: 254 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 299
A G YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 30 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 85 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 139
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + A VGT
Sbjct: 140 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 30/232 (12%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGI 143
KN +GEG FG V K + + + VAVK L ++ ++E N L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK------------------ 185
V H +++KL G C+ D LL+ EY GS+ +L
Sbjct: 83 VNHPHVIKLYGACSQDGPL----LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 186 ----SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
E LT + A ++G+ YL E ++ RD + NIL+ E K+SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
L+R E + + + A E + +SDVWS+GV L+E++T
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVK 151
+G+G FG VY+G ++ + VAVK + ++ E++ E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 203
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
G+AYL+ + + RD + N ++ + K+ DFG+ R + + +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY--LSDAK 321
+ APE ++ G SD+WS+GV L+E+ + +EQ PY LS+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQ 240
Query: 322 QFRQIVDPRLEGKY---SLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 373
+ ++D G Y +++ + +C N + RP LE+VN + D
Sbjct: 241 VLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF---LEIVNLLKD 288
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 20/235 (8%)
Query: 80 LKSATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGVQ-GHKEWMTE 137
L A + + IGEG +G V+K +KN V V Q G G+ +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV-QTGEEGMPLSTIREVAV 64
Query: 138 VNFLGIVEHQNLVKLVGYC-ADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 196
+ L EH N+V+L C +R + LV+E+ VDQ L+ + + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPT 119
Query: 197 KIAQDAA----RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
+ +D RGL +LH +++ RD K NIL+ KL+DFGLAR+ F
Sbjct: 120 ETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQ 173
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 307
T+VV T+ Y APE + A D+WS G E+ R+P+ R +Q
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 90 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 146 LVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH--KE 133
T A+ + N+ IG+G F V K + EVAV+ + + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVRIIDKTQLNSSSLQK 59
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
EV + ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIMKVLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 254 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 299
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 28/221 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH--KEWMTEVNFLGI 143
N+ IG+G F V K + EVAVK + + + ++ EV + +
Sbjct: 8 NYRLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 62
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+ H N+VKL + + E+ + LV EY G V YL W M+ K A+
Sbjct: 63 LNHPNIVKL--FEVIETEKTLY--LVMEYASGGEVFDYLVAHG-----W-MKEKEARAKF 112
Query: 204 R----GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
R + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 113 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFC 166
Query: 260 GTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 299
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 95 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 151 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR 195
TE+ L + HQ++ +L E + +V EY P G + Y+ S+ L+
Sbjct: 57 TEIEALKNLRHQHICQLYHVL----ETANKIFMVLEYCPGGELFDYII--SQDRLSEEET 110
Query: 196 LKIAQDAARGLAYLH-EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ + +AY+H +G RD K N+L DE KL DFGL H+
Sbjct: 111 RVVFRQIVSAVAYVHSQGYAH----RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL 166
Query: 255 STAVVGTMGYAAPEYVQ-TGRLAARSDVWSYGVFLYELITGRRPIDRNRP--------RS 305
T G++ YAAPE +Q L + +DVWS G+ LY L+ G P D + R
Sbjct: 167 QTCC-GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG 225
Query: 306 EQKLLQWVKPYLSDAKQFRQI--VDPR 330
+ + +W+ P S +Q+ VDP+
Sbjct: 226 KYDVPKWLSP--SSILLLQQMLQVDPK 250
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P++ +VAVK L + + ++E+ + ++ +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 195
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 137 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 196 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 193 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVK 151
+G+G FG VY+G ++ + VAVK + ++ E++ E + + ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 203
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 84 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
G+AYL+ + + RD + N ++ + K+ DFG+ R + + +
Sbjct: 140 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY--LSDAK 321
+ APE ++ G SD+WS+GV L+E+ + +EQ PY LS+ +
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQ 239
Query: 322 QFRQIVDPRLEGKY---SLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 373
+ ++D G Y +++ + +C N + RP LE+VN + D
Sbjct: 240 VLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF---LEIVNLLKD 287
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 33 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG 87
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 132
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 133 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 45/295 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVK 151
+G+G FG VY+G ++ + VAVK + ++ E++ E + + ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 203
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 82 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
G+AYL+ + + RD + N ++ + K+ DFG+ R + +
Sbjct: 138 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY--LSDAK 321
+ APE ++ G SD+WS+GV L+E+ + +EQ PY LS+ +
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQ 237
Query: 322 QFRQIVDPRLEGKY---SLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 373
+ ++D G Y +++ + +C N + RP LE+VN + D
Sbjct: 238 VLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF---LEIVNLLKD 285
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 92 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 148 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-E 137
K ++F ++GEG F V + + + E A+K L +R + + ++T E
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRE 60
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
+ + ++H VKL + DDE+ L Y NG + +Y+ K + R
Sbjct: 61 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFY 115
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 257
A+ + L YLH II RD K NILL+E + +++DFG A++ E +
Sbjct: 116 TAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 171
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
VGT Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 172 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 80 LKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM---- 135
L A + + IGEG +G V+K ++ ++ + V L R VQ +E M
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFV-----ALKRVRVQTGEEGMPLST 58
Query: 136 ----TEVNFLGIVEHQNLVKLVGYC-ADDDERGIQRLLVYEYMPNGSVDQYLSPKSETIL 190
+ L EH N+V+L C +R + LV+E+ VDQ L+ + +
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVP 113
Query: 191 TWAMRLKIAQDAA----RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG 246
+ + +D RGL +LH +++ RD K NIL+ KL+DFGLAR+
Sbjct: 114 EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI- 169
Query: 247 PSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSE 306
F T+VV T+ Y APE + A D+WS G E+ R+P+ R +
Sbjct: 170 --YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVD 226
Query: 307 Q 307
Q
Sbjct: 227 Q 227
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-E 137
K ++F ++GEG F V + + + E A+K L +R + + ++T E
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRE 59
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
+ + ++H VKL + DDE+ L Y NG + +Y+ K + R
Sbjct: 60 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFY 114
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 257
A+ + L YLH II RD K NILL+E + +++DFG A++ E +
Sbjct: 115 TAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 170
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
VGT Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 171 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 100/229 (43%), Gaps = 21/229 (9%)
Query: 79 ELKSATKN-FSRSVVIGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE 133
E + TKN F + V+G+GGFG C + K + + K+ G K+
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
+ +VN V + Y + + LV M G + ++ + A
Sbjct: 237 ILEKVN-------SRFVVSLAYAYETKD---ALCLVLTLMNGGDLKFHIYHMGQAGFPEA 286
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
+ A + GL LH +I+ RD K NILLD+ + ++SD GLA P EG T
Sbjct: 287 RAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQT- 341
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 302
VGT+GY APE V+ R D W+ G LYE+I G+ P + +
Sbjct: 342 -IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH--KE 133
T A+ + N+ IG+G F V K + EVAV+ + + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVRIIDKTQLNSSSLQK 59
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
EV + ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIMKVLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 254 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 299
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 45/295 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVK 151
+G+G FG VY+G ++ + VAVK + ++ E++ E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 203
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
G+AYL+ + + RD + N ++ + K+ DFG+ R + +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY--LSDAK 321
+ APE ++ G SD+WS+GV L+E+ + +EQ PY LS+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQ 240
Query: 322 QFRQIVDPRLEGKY---SLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 373
+ ++D G Y +++ + +C N + RP LE+VN + D
Sbjct: 241 VLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF---LEIVNLLKD 288
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 100/229 (43%), Gaps = 21/229 (9%)
Query: 79 ELKSATKN-FSRSVVIGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE 133
E + TKN F + V+G+GGFG C + K + + K+ G K+
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
+ +VN V + Y + + LV M G + ++ + A
Sbjct: 237 ILEKVN-------SRFVVSLAYAYETKD---ALCLVLTLMNGGDLKFHIYHMGQAGFPEA 286
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
+ A + GL LH +I+ RD K NILLD+ + ++SD GLA P EG T
Sbjct: 287 RAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQT- 341
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 302
VGT+GY APE V+ R D W+ G LYE+I G+ P + +
Sbjct: 342 -IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 122/258 (47%), Gaps = 26/258 (10%)
Query: 44 LTSQNVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYK 103
+ S+ SA++V+ A P+ R K+ + + S++ ++G G FG V+K
Sbjct: 54 VKSKRTSALAVDIPAPPA--PFDHRIVTAKQGAVNSFYTV----SKTEILGGGRFGQVHK 107
Query: 104 GLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERG 163
E+ + +++A K + RG++ +E E++ + ++H NL++L Y A + +
Sbjct: 108 -----CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL--YDAFESKND 160
Query: 164 IQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFK 223
I +LV EY+ G + + +S + L + Q G+ ++H+ I+ D K
Sbjct: 161 I--VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ-ICEGIRHMHQ---MYILHLDLK 214
Query: 224 SSNILL--DEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSD 280
NIL + K+ DFGLAR P E GT + APE V ++ +D
Sbjct: 215 PENILCVNRDAKQIKIIDFGLARRYKPREKLK----VNFGTPEFLAPEVVNYDFVSFPTD 270
Query: 281 VWSYGVFLYELITGRRPI 298
+WS GV Y L++G P
Sbjct: 271 MWSVGVIAYMLLSGLSPF 288
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-E 137
K ++F ++GEG F V + + + E A+K L +R + + ++T E
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRE 57
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
+ + ++H VKL + DDE+ L Y NG + +Y+ K + R
Sbjct: 58 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFY 112
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 257
A+ + L YLH II RD K NILL+E + +++DFG A++ E +
Sbjct: 113 TAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 168
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
VGT Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 169 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-E 137
K ++F ++GEG F V + + + E A+K L +R + + ++T E
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRE 58
Query: 138 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
+ + ++H VKL + DDE+ L Y NG + +Y+ K + R
Sbjct: 59 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFY 113
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 257
A+ + L YLH II RD K NILL+E + +++DFG A++ E +
Sbjct: 114 TAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 169
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
VGT Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E +++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 80 LKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM---- 135
L A + + IGEG +G V+K ++ ++ + V L R VQ +E M
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFV-----ALKRVRVQTGEEGMPLST 58
Query: 136 ----TEVNFLGIVEHQNLVKLVGYC-ADDDERGIQRLLVYEYMPNGSVDQYLSPKSETIL 190
+ L EH N+V+L C +R + LV+E+ VDQ L+ + +
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVP 113
Query: 191 TWAMRLKIAQDAA----RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG 246
+ + +D RGL +LH +++ RD K NIL+ KL+DFGLAR+
Sbjct: 114 EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI- 169
Query: 247 PSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSE 306
F T+VV T+ Y APE + A D+WS G E+ R+P+ R +
Sbjct: 170 --YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVD 226
Query: 307 Q 307
Q
Sbjct: 227 Q 227
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 245
+E +T +++ DA + L + H+ II RD K +NIL+ K+ DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARA 165
Query: 246 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 304
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 166 IADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 305 S 305
S
Sbjct: 226 S 226
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 130
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 131 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 245
+E +T +++ DA + L + H+ II RD K +NI++ K+ DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 246 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 304
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
Query: 305 S 305
S
Sbjct: 226 S 226
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 25/236 (10%)
Query: 135 MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKSETILTW 192
++EVN L ++H N+V+ Y D +V EY G + ++ K L
Sbjct: 53 VSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 193 AMRLKIAQDAARGLAYLHEGMD--FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 250
L++ L H D ++ RD K +N+ LD + N KL DFGLAR+ +
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD- 169
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 310
T + A VGT Y +PE + +SD+WS G LYEL P S+++L
Sbjct: 170 -TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---AFSQKEL- 224
Query: 311 QWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
A + R+ R+ +YS L ++ + NL RP + E+LE
Sbjct: 225 ---------AGKIREGKFRRIPYRYSDELNEIITRMLNL----KDYHRPSVEEILE 267
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 33 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 87
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 132
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 133 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVK 151
+G+G FG VY+G ++ + VAVK + ++ E++ E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 203
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
G+AYL+ + + RD + N ++ + K+ DFG+ R + +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ APE ++ G SD+WS+GV L+E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 118/259 (45%), Gaps = 31/259 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM-TEVNFLGIVEHQNLV 150
V+G G F V +ED + VA+K + ++ ++G + M E+ L ++H N+V
Sbjct: 25 VLGTGAFSEVIL-----AEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
L D E G L+ + + G + + K A RL I Q + YLH
Sbjct: 80 AL----DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQ-VLDAVKYLH 133
Query: 211 EGMDFQIIVRDFKSSNIL---LDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 267
D I+ RD K N+L LDE +SDFGL+++ E V + GT GY AP
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 268 EYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLL----QWVKPYLSD--- 319
E + + D WS GV Y L+ G P D N + +++L ++ PY D
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 320 -AKQF-RQIVDPRLEGKYS 336
AK F R +++ E +++
Sbjct: 248 SAKDFIRHLMEKDPEKRFT 266
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGCLLKYIR-KIGSFDETCTRFYTAEI 141
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 130
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 131 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 33 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG 87
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 132
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 133 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ--GHKEWMTEVNFLGI 143
N+ IG+G F V K + EVAVK + + + ++ EV + I
Sbjct: 16 NYRLQKTIGKGNFAKV-----KLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+ H N+VKL + + E+ + LV EY G V YL A R K Q
Sbjct: 71 LNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ-IV 124
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT--HVSTAVVGT 261
+ Y H+ I+ RD K+ N+LLD N K++DFG S FT + G+
Sbjct: 125 SAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGF-----SNEFTVGNKLDTFCGS 176
Query: 262 MGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 299
YAAPE Q + DVWS GV LY L++G P D
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 130
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 131 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 245
+E +T +++ DA + L + H+ II RD K +NI++ K+ DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 246 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 304
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 305 S 305
S
Sbjct: 226 S 226
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLG-I 143
N +G G FG V + ++VAVK L KE M+E+ + +
Sbjct: 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILT------WAMR-- 195
+H+N+V L+G C G L++ EY G + +L K+E L +R
Sbjct: 99 GQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 196 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 255
L + A+G+A+L I RD + N+LL AK+ DFGLAR ++ V
Sbjct: 155 LHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 256 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
+ + APE + +SDVWSYG+ L+E+ + G P
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 254
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL--------------- 134
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 245
+E +T +++ DA + L + H+ II RD K +NI++ K+ DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 246 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 304
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 305 S 305
S
Sbjct: 226 S 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 36 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 90
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 91 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 135
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 136 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 37 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 91
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 92 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 136
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 137 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 28 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 82
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 83 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 127
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 128 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 17/220 (7%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLG-I 143
N +G G FG V + ++VAVK L KE M+E+ + +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+H+N+V L+G C G L++ EY G + +L KS + T IA A
Sbjct: 107 GQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKSRVLET-DPAFAIANSTA 161
Query: 204 RGLAYLH------EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
LH +GM F I RD + N+LL AK+ DFGLAR ++
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
V + + APE + +SDVWSYG+ L+E+ +
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 134
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLG-I 143
N +G G FG V + ++VAVK L KE M+E+ + +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILT------WAMR-- 195
+H+N+V L+G C G L++ EY G + +L K+E L +R
Sbjct: 107 GQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 196 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 255
L + A+G+A+L I RD + N+LL AK+ DFGLAR ++ V
Sbjct: 163 LHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 256 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ + APE + +SDVWSYG+ L+E+ +
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG VYK +++ V A K + + + +++M E++ L +H N+VKL
Sbjct: 45 LGDGAFGKVYK-----AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 99
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ I + E+ G+VD + + E LT + + + L YLH
Sbjct: 100 LDAFYYENNLWI----LIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH-- 152
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
D +II RD K+ NIL + KL+DFG++ + + +GT + APE V
Sbjct: 153 -DNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 273 GRLAAR-----SDVWSYGVFLYELITGRRP 297
R +DVWS G+ L E+ P
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 29 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 83
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 84 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 128
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 129 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 29 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 83
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 84 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 128
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 129 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 39 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 93
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 94 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 138
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 139 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 130
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 131 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 99/223 (44%), Gaps = 32/223 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ--GHKEWMTEVNFLGI 143
N+ IG+G F V K + EVA+K + + + ++ EV + I
Sbjct: 16 NYRLLKTIGKGNFAKV-----KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+ H N+VKL + + E+ + L+ EY G V YL M+ K A+
Sbjct: 71 LNHPNIVKL--FEVIETEKTL--YLIMEYASGGEVFDYLVAHGR------MKEKEARSKF 120
Query: 204 R----GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST--A 257
R + Y H+ +I+ RD K+ N+LLD N K++DFG S FT A
Sbjct: 121 RQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGF-----SNEFTVGGKLDA 172
Query: 258 VVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 299
G YAAPE Q + DVWS GV LY L++G P D
Sbjct: 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 245
+E +T +++ DA + L + H+ II RD K +NI++ K+ DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 246 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 304
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 305 S 305
S
Sbjct: 226 S 226
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 29 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 83
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 84 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 138
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + + VGT
Sbjct: 139 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 33 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 87
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 88 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 142
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + + VGT
Sbjct: 143 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 41/300 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY-- 208
L+G C + G +++ E+ G++ YL K + + K + Y
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 209 -LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTM 262
+ +GM+F + I RD + NILL E+ K+ DFGLAR + + A + +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PL 210
Query: 263 GYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPY 316
+ APE + +SDVWS+GV L+E+ + G P ID R ++ + P
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 270
Query: 317 LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 376
+ + ++ ++D C RP SE++E + ++ A+A
Sbjct: 271 YTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 130
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 131 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 14 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 68
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 69 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 123
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 124 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 51 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 105
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 106 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 150
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 151 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIG 89
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 134
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG VYK +++ V A K + + + +++M E++ L +H N+VKL
Sbjct: 45 LGDGAFGKVYK-----AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 99
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ I + E+ G+VD + + E LT + + + L YLH
Sbjct: 100 LDAFYYENNLWI----LIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH-- 152
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
D +II RD K+ NIL + KL+DFG++ + + +GT + APE V
Sbjct: 153 -DNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 273 GRLAAR-----SDVWSYGVFLYELITGRRP 297
R +DVWS G+ L E+ P
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 186 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 245
+E +T +++ DA + L + H+ II RD K +NI++ K+ DFG+AR
Sbjct: 126 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 182
Query: 246 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 304
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 183 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
Query: 305 S 305
S
Sbjct: 243 S 243
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 134
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 41/300 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY-- 208
L+G C + G +++ E+ G++ YL K + + K + Y
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 209 -LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTM 262
+ +GM+F + I RD + NILL E+ K+ DFGLAR + + A + +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL-PL 210
Query: 263 GYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPY 316
+ APE + +SDVWS+GV L+E+ + G P ID R ++ + P
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPD 270
Query: 317 LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 376
+ + ++ ++D C RP SE++E + ++ A+A
Sbjct: 271 YTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLGIVEHQNLVK 151
IG G FG V+ G ++ + VAVK K +++ E L H N+V+
Sbjct: 122 IGRGNFGEVFSGRLR-----ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
L+G C I V E + G +L + + + L++ DAA G+ YL
Sbjct: 177 LIGVCTQKQPIYI----VMELVQGGDFLTFLRTEGARLRVKTL-LQMVGDAAAGMEYLES 231
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAPEYV 270
I RD + N L+ E+ K+SDFG++R ++G S + + + APE +
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 271 QTGRLAARSDVWSYGVFLYE 290
GR ++ SDVWS+G+ L+E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 117/259 (45%), Gaps = 31/259 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM-TEVNFLGIVEHQNLV 150
V+G G F V +ED + VA+K + + ++G + M E+ L ++H N+V
Sbjct: 25 VLGTGAFSEVIL-----AEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
L D E G L+ + + G + + K A RL I Q + YLH
Sbjct: 80 AL----DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQ-VLDAVKYLH 133
Query: 211 EGMDFQIIVRDFKSSNIL---LDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 267
D I+ RD K N+L LDE +SDFGL+++ E V + GT GY AP
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 268 EYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLL----QWVKPYLSD--- 319
E + + D WS GV Y L+ G P D N + +++L ++ PY D
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 320 -AKQF-RQIVDPRLEGKYS 336
AK F R +++ E +++
Sbjct: 248 SAKDFIRHLMEKDPEKRFT 266
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 141
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG VYK +++ V A K + + + +++M E++ L +H N+VKL
Sbjct: 45 LGDGAFGKVYK-----AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 99
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+ ++ I + E+ G+VD + + E LT + + + L YLH
Sbjct: 100 LDAFYYENNLWI----LIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH-- 152
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
D +II RD K+ NIL + KL+DFG++ + +GT + APE V
Sbjct: 153 -DNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 273 GRLAAR-----SDVWSYGVFLYELITGRRP 297
R +DVWS G+ L E+ P
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 117/259 (45%), Gaps = 31/259 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM-TEVNFLGIVEHQNLV 150
V+G G F V +ED + VA+K + + ++G + M E+ L ++H N+V
Sbjct: 25 VLGTGAFSEVIL-----AEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
L D E G L+ + + G + + K A RL I Q + YLH
Sbjct: 80 AL----DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQ-VLDAVKYLH 133
Query: 211 EGMDFQIIVRDFKSSNIL---LDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 267
D I+ RD K N+L LDE +SDFGL+++ E V + GT GY AP
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 268 EYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLL----QWVKPYLSD--- 319
E + + D WS GV Y L+ G P D N + +++L ++ PY D
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 320 -AKQF-RQIVDPRLEGKYS 336
AK F R +++ E +++
Sbjct: 248 SAKDFIRHLMEKDPEKRFT 266
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V KG + + +K E + E N + +++ +V++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQLDNPYIVRM 93
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAY 208
+G C + +LV E G +++YL K + I+ ++ + G+ Y
Sbjct: 94 IGICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 142
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + RD + N+LL Q AK+SDFGL++ L E + T + + AP
Sbjct: 143 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 199
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E + + +++SDVWS+GV ++E + G++P
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V KG + + +K E + E N + +++ +V++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQLDNPYIVRM 93
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAY 208
+G C + +LV E G +++YL K + I+ ++ + G+ Y
Sbjct: 94 IGICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 142
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + RD + N+LL Q AK+SDFGL++ L E + T + + AP
Sbjct: 143 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 199
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E + + +++SDVWS+GV ++E + G++P
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 30 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 85 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 139
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 140 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 33 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 87
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 88 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 142
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 143 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + Y G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 31/236 (13%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE---WMTEVNFLG 142
+F+ +V+G+G FG V K +E+ A+K L + V + M E L
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEE-----LYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 143 IVEHQNLVKLVGYCADDDERGIQRL-LVYEYMPNGS----VDQYLSPKSETILTWAMRLK 197
+++ + + C + + RL V EY+ G + Q K + +A +
Sbjct: 75 LLDKPPFLTQLHSCF----QTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEIS 130
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 257
I GL +LH+ II RD K N++LD + + K++DFG+ + +G T +
Sbjct: 131 I------GLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT--TRE 179
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
GT Y APE + D W+YGV LYE++ G+ P D E +L Q +
Sbjct: 180 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG---EDEDELFQSI 232
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 28/223 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-----GVQGHKE 133
++KS K + + +GEG F VYK KN+ +Q V + +LG R G+ ++
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNT---NQIVAIKKIKLGHRSEAKDGI--NRT 58
Query: 134 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
+ E+ L + H N++ L+ A + I LV+++M D + K +++
Sbjct: 59 ALREIKLLQELSHPNIIGLLD--AFGHKSNIS--LVFDFM---ETDLEVIIKDNSLVLTP 111
Query: 194 MRLKIAQDAA-RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL--GPSEG 250
+K +GL YLH+ I+ RD K +N+LLDE KL+DFGLA+ P+
Sbjct: 112 SHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 168
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELI 292
+ H V T Y APE + R+ D+W+ G L EL+
Sbjct: 169 YXH----QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 30 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 85 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 139
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 140 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V KG + + +K E + E N + +++ +V++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQLDNPYIVRM 91
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAY 208
+G C + +LV E G +++YL K + I+ ++ + G+ Y
Sbjct: 92 IGICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 140
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + RD + N+LL Q AK+SDFGL++ L E + T + + AP
Sbjct: 141 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 197
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E + + +++SDVWS+GV ++E + G++P
Sbjct: 198 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 117/259 (45%), Gaps = 31/259 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM-TEVNFLGIVEHQNLV 150
V+G G F V +ED + VA+K + + ++G + M E+ L ++H N+V
Sbjct: 25 VLGTGAFSEVIL-----AEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
L D E G L+ + + G + + K A RL I Q + YLH
Sbjct: 80 AL----DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQ-VLDAVKYLH 133
Query: 211 EGMDFQIIVRDFKSSNIL---LDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 267
D I+ RD K N+L LDE +SDFGL+++ E V + GT GY AP
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 268 EYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLL----QWVKPYLSD--- 319
E + + D WS GV Y L+ G P D N + +++L ++ PY D
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 320 -AKQF-RQIVDPRLEGKYS 336
AK F R +++ E +++
Sbjct: 248 SAKDFIRHLMEKDPEKRFT 266
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 29 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 83
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 84 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 138
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 139 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 22/227 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLG-I 143
N +G G FG V + ++VAVK L KE M+E+ + +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS---ETILTWAMR----- 195
+H+N+V L+G C G L++ EY G + +L KS ET +A+
Sbjct: 107 GQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 196 ----LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF 251
L + A+G+A+L I RD + N+LL AK+ DFGLAR ++
Sbjct: 163 TRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 252 THVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
V + + APE + +SDVWSYG+ L+E+ + G P
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 141
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 92 VIGE-GGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
+IGE G FG VYK +N E V A K + + + +++M E++ L +H N+V
Sbjct: 16 IIGELGDFGKVYKA--QNKE---TSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+ ++ I + E+ G+VD + + E LT + + + L YLH
Sbjct: 71 KLLDAFYYENNLWI----LIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH 125
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
D +II RD K+ NIL + KL+DFG++ + + +GT + APE V
Sbjct: 126 ---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN-TRTXIQRRDSFIGTPYWMAPEVV 181
Query: 271 QTGRLAAR-----SDVWSYGVFLYELITGRRP 297
R +DVWS G+ L E+ P
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 35 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 89
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 90 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 144
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 145 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLGIVEHQNLVK 151
IG G FG V+ G ++ + VAVK K +++ E L H N+V+
Sbjct: 122 IGRGNFGEVFSGRLR-----ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
L+G C I V E + G +L + + + L++ DAA G+ YL
Sbjct: 177 LIGVCTQKQPIYI----VMELVQGGDFLTFLRTEGARLRVKTL-LQMVGDAAAGMEYLES 231
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAPEYV 270
I RD + N L+ E+ K+SDFG++R ++G S + + + APE +
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 271 QTGRLAARSDVWSYGVFLYELIT 293
GR ++ SDVWS+G+ L+E +
Sbjct: 288 NYGRYSSESDVWSFGILLWETFS 310
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 101/217 (46%), Gaps = 35/217 (16%)
Query: 93 IGEGGFG--CVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGIVEHQ 147
IG+G FG C+ + KN K A+K + ++ E E+ + +EH
Sbjct: 23 IGKGSFGKVCIVQ---KND----TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHP 75
Query: 148 NLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAA 203
LV L Y D+E +V + + G + +L K ET+ + L +A D
Sbjct: 76 FLVNL-WYSFQDEE---DMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD-- 129
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YL +II RD K NILLDE + ++DF +A + P E T ++T + GT
Sbjct: 130 ----YLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--TQITT-MAGTKP 179
Query: 264 YAAPEYVQTGRLAARS---DVWSYGVFLYELITGRRP 297
Y APE + + A S D WS GV YEL+ GRRP
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V KG + + +K E + E N + +++ +V++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQLDNPYIVRM 83
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAY 208
+G C + +LV E G +++YL K + I+ ++ + G+ Y
Sbjct: 84 IGICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 132
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + RD + N+LL Q AK+SDFGL++ L E + T + + AP
Sbjct: 133 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 189
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E + + +++SDVWS+GV ++E + G++P
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 141
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA++++ Q + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 134
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVK 151
+G+G FG VY+G ++ + VAVK + ++ E++ E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 203
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
G+AYL+ + + R+ + N ++ + K+ DFG+ R + + +
Sbjct: 141 DGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ APE ++ G SD+WS+GV L+E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 141
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V KG + + +K E + E N + +++ +V++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQLDNPYIVRM 73
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAY 208
+G C + +LV E G +++YL K + I+ ++ + G+ Y
Sbjct: 74 IGICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 122
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + RD + N+LL Q AK+SDFGL++ L E + T + + AP
Sbjct: 123 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 179
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E + + +++SDVWS+GV ++E + G++P
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V KG + + +K E + E N + +++ +V++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQLDNPYIVRM 71
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAY 208
+G C + +LV E G +++YL K + I+ ++ + G+ Y
Sbjct: 72 IGICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 120
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + RD + N+LL Q AK+SDFGL++ L E + T + + AP
Sbjct: 121 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 177
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E + + +++SDVWS+GV ++E + G++P
Sbjct: 178 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F V + + + E A+K L +R + + ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 141
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 25/236 (10%)
Query: 135 MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKSETILTW 192
++EVN L ++H N+V+ Y D +V EY G + ++ K L
Sbjct: 53 VSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 193 AMRLKIAQDAARGLAYLHEGMD--FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 250
L++ L H D ++ RD K +N+ LD + N KL DFGLAR+ +
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD- 169
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 310
T + VGT Y +PE + +SD+WS G LYEL P S+++L
Sbjct: 170 -TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---AFSQKEL- 224
Query: 311 QWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
A + R+ R+ +YS L ++ + NL RP + E+LE
Sbjct: 225 ---------AGKIREGKFRRIPYRYSDELNEIITRMLNL----KDYHRPSVEEILE 267
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V KG + + +K E + E N + +++ +V++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQLDNPYIVRM 77
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAY 208
+G C + +LV E G +++YL K + I+ ++ + G+ Y
Sbjct: 78 IGICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 126
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + RD + N+LL Q AK+SDFGL++ L E + T + + AP
Sbjct: 127 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 183
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E + + +++SDVWS+GV ++E + G++P
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 26/237 (10%)
Query: 69 PSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV 128
P KE ++K ++F ++G+G FG V+ K + A+K L + V
Sbjct: 2 PELNKERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQ-----FFAIKALKKDVV 56
Query: 129 QGHKE---WMTEVNFLGIV-EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP 184
+ M E L + EH L + +C + + V EY+ G + ++
Sbjct: 57 LMDDDVECTMVEKRVLSLAWEHPFLTHM--FCTFQTKENL--FFVMEYLNGGDLMYHIQS 112
Query: 185 KSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR 244
+ L+ A A + GL +LH I+ RD K NILLD+ + K++DFG+ +
Sbjct: 113 CHKFDLSRATF--YAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 167
Query: 245 ---LGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
LG ++ + GT Y APE + + D WS+GV LYE++ G+ P
Sbjct: 168 ENMLGDAK-----TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V KG + + +K E + E N + +++ +V++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQLDNPYIVRM 435
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAY 208
+G C + +LV E G +++YL K + I+ ++ + G+ Y
Sbjct: 436 IGICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 484
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + RD + N+LL Q AK+SDFGL++ L E + T + + AP
Sbjct: 485 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 541
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E + + +++SDVWS+GV ++E + G++P
Sbjct: 542 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVK 151
+G+G FG VY+G ++ + VAVK + ++ E++ E + + ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 203
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 86 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
G+AYL+ + + R+ + N ++ + K+ DFG+ R + + +
Sbjct: 142 DGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ APE ++ G SD+WS+GV L+E+ +
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIV-EHQN 148
+GEG FG V + + + + P + V VAVK L + + ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 194
++ L+G C D + + Y G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 32/223 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ--GHKEWMTEVNFLGI 143
N+ IG+G F V K + EVA+K + + + ++ EV + I
Sbjct: 13 NYRLLKTIGKGNFAKV-----KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI 67
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+ H N+VKL + + E+ + L+ EY G V YL + M+ K A+
Sbjct: 68 LNHPNIVKL--FEVIETEKTL--YLIMEYASGGEVFDYL------VAHGRMKEKEARSKF 117
Query: 204 R----GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST--A 257
R + Y H+ +I+ RD K+ N+LLD N K++DFG S FT
Sbjct: 118 RQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGF-----SNEFTVGGKLDT 169
Query: 258 VVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 299
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 170 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLVK 151
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 51 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 105
Query: 152 LVGYC-ADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+ A E+ LV M D Y K++ + + + Q RGL Y+H
Sbjct: 106 INDIIRAPTIEQMKDVYLVTHLM---GADLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIH 161
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVSTAVVGTMGYAAPEY 269
++ RD K SN+LL+ + K+ DFGLAR+ P T T V T Y APE
Sbjct: 162 SA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 270 VQTGRLAARS-DVWSYGVFLYELITGR 295
+ + +S D+WS G L E+++ R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V KG + + +K E + E N + +++ +V++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQLDNPYIVRM 436
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAY 208
+G C + +LV E G +++YL K + I+ ++ + G+ Y
Sbjct: 437 IGICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 485
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + RD + N+LL Q AK+SDFGL++ L E + T + + AP
Sbjct: 486 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 542
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E + + +++SDVWS+GV ++E + G++P
Sbjct: 543 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVE 145
+++ IGEG +G ++ ++ D +K VA+K++ Q + + + E+ L
Sbjct: 45 YTQLQYIGEGAYG-----MVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK------IA 199
H+N++ + R I R E M + + Q L L + +L
Sbjct: 100 HENVIGI---------RDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 200 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVSTAV 258
RGL Y+H ++ RD K SN+L++ + K+ DFGLAR+ P T T
Sbjct: 151 YQILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 127/303 (41%), Gaps = 42/303 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD---AARGLA 207
L+G C + G +++ E+ G++ YL K + + + +D +
Sbjct: 96 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 208 Y---LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 260
Y + +GM+F + I RD + NILL E+ K+ DFGLAR +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVK 314
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 272
Query: 315 PYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 374
P + + ++ ++D C RP SE++E + ++ A
Sbjct: 273 PDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQA 311
Query: 375 SAE 377
+A+
Sbjct: 312 NAQ 314
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 102/237 (43%), Gaps = 27/237 (11%)
Query: 135 MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKSETILTW 192
++EVN L ++H N+V+ Y D +V EY G + ++ K L
Sbjct: 53 VSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 193 AMRLKIAQDAARGLAYLHEGMD--FQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSE 249
L++ L H D ++ RD K +N+ LD + N KL DFGLAR L E
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE 170
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
F + VGT Y +PE + +SD+WS G LYEL P S+++L
Sbjct: 171 DF---AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---AFSQKEL 224
Query: 310 LQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
A + R+ R+ +YS L ++ + NL RP + E+LE
Sbjct: 225 ----------AGKIREGKFRRIPYRYSDELNEIITRMLNL----KDYHRPSVEEILE 267
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 135 MTEVNFLGIVE-HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
+ EV+ L V H N+++L D E LV++ M G + YL+ K L+
Sbjct: 71 LKEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEK 124
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSEGFT 252
KI + + LH+ I+ RD K NILLD+ N KL+DFG + +L P E
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL- 180
Query: 253 HVSTAVVGTMGYAAPEYVQTGR------LAARSDVWSYGVFLYELITGRRPI 298
+V GT Y APE ++ D+WS GV +Y L+ G P
Sbjct: 181 ---RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 26/237 (10%)
Query: 69 PSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV 128
P KE ++K ++F ++G+G FG V+ K + A+K L + V
Sbjct: 1 PELNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQ-----FFAIKALKKDVV 55
Query: 129 QGHKE---WMTEVNFLGIV-EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP 184
+ M E L + EH L + +C + + V EY+ G + ++
Sbjct: 56 LMDDDVECTMVEKRVLSLAWEHPFLTHM--FCTFQTKENL--FFVMEYLNGGDLMYHIQS 111
Query: 185 KSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR 244
+ L+ A A + GL +LH I+ RD K NILLD+ + K++DFG+ +
Sbjct: 112 CHKFDLSRATF--YAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166
Query: 245 ---LGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
LG ++ + GT Y APE + + D WS+GV LYE++ G+ P
Sbjct: 167 ENMLGDAK-----TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
IGEG FG V++G+ + E+P+ V + K V+ ++++ E + +H ++V
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIV 74
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ I L G + +L + + L A + A + LAYL
Sbjct: 75 KLIGVITENPVWIIMELCTL-----GELRSFLQVRKYS-LDLASLILYAYQLSTALAYLE 128
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 184
Query: 271 QTGRLAARSDVWSYGVFLYE-LITGRRPI 298
R + SDVW +GV ++E L+ G +P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 134
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 42/220 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH-KEWMTEVNFLGIVEHQNLV- 150
IGEG +G ++ ++ D KV VA+K++ Q + + + E+ L H+N++
Sbjct: 36 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 90
Query: 151 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 197
K V D E + +LL +++ N + +L
Sbjct: 91 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 135
Query: 198 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 256
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T
Sbjct: 136 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 45/305 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 209
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 210 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAV 258
+GM+F + I RD + NILL E+ K+ DFGLAR + + A
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 259 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQW 312
+ + + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 212 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 313 VKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
P + + ++ ++D C RP SE++E + ++
Sbjct: 271 RAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 309
Query: 373 DASAE 377
A+A+
Sbjct: 310 QANAQ 314
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 30/231 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLG-I 143
N +G G FG V + ++VAVK L KE M+E+ + +
Sbjct: 32 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 91
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR-------- 195
+H+N+V L+G C G L++ EY G + +L K+E +L ++
Sbjct: 92 GQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 196 -------------LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL 242
L + A+G+A+L I RD + N+LL AK+ DFGL
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 243 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
AR ++ V + + APE + +SDVWSYG+ L+E+ +
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 45/305 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 209
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 86 NLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 210 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAV 258
+GM+F + I RD + NILL E+ K+ DFGLAR + + A
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 259 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQW 312
+ + + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 203 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 261
Query: 313 VKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
P + + ++ ++D C RP SE++E + ++
Sbjct: 262 RAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 300
Query: 373 DASAE 377
A+A+
Sbjct: 301 QANAQ 305
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 125/305 (40%), Gaps = 47/305 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS------------ETILTWAMRLKI 198
L+G C + G +++ E+ G++ YL K + LT +
Sbjct: 97 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV 258
+ A+G+ +L + I RD + NILL E+ K+ DFGLAR +
Sbjct: 154 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 259 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQW 312
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 313 VKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
P + + ++ ++D C RP SE++E + ++
Sbjct: 271 RAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 309
Query: 373 DASAE 377
A+A+
Sbjct: 310 QANAQ 314
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 17/217 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV--QGHKEWMT-EVNFL 141
++F ++GEG F + + + E A+K L +R + + ++T E + +
Sbjct: 30 EDFKFGKILGEGSFSTTVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 85 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 139
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 140 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 137 EVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY--LSPKSETILTWAM 194
E+ L ++H N+VKLV D +E + +V+E + G V + L P SE +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHL--YMVFELVNQGPVMEVPTLKPLSEDQARFYF 143
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
QD +G+ YLH +II RD K SN+L+ E + K++DFG++ +G +
Sbjct: 144 -----QDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSN--EFKGSDAL 193
Query: 255 STAVVGTMGYAAPEYVQTGR--LAARS-DVWSYGVFLYELITGRRPIDRNR 302
+ VGT + APE + R + ++ DVW+ GV LY + G+ P R
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 45/305 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 209
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 86 NLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 210 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAV 258
+GM+F + I RD + NILL E+ K+ DFGLAR + + A
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 259 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQW 312
+ + + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 203 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 261
Query: 313 VKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
P + + ++ ++D C RP SE++E + ++
Sbjct: 262 RAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 300
Query: 373 DASAE 377
A+A+
Sbjct: 301 QANAQ 305
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLV 150
IGEG FG V++G+ + E+P+ + VA+K +E ++ E + +H ++V
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ I L G + +L + + L A + A + LAYL
Sbjct: 75 KLIGVITENPVWIIMELCTL-----GELRSFLQVRKYS-LDLASLILYAYQLSTALAYLE 128
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 184
Query: 271 QTGRLAARSDVWSYGVFLYE-LITGRRPI 298
R + SDVW +GV ++E L+ G +P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 34/219 (15%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ---GHKEWMTEVNFLGIVEHQN 148
V+G+G FG V +D E AVK + +R V+ + + EV L ++H N
Sbjct: 33 VLGKGSFGEVIL-----CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
++KL + D +G L+ Y D+ +S K + + A +I + G+ Y
Sbjct: 88 IMKLYEFFED---KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITY 141
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV-----VG 260
+H+ +I+ RD K N+LL+ + N ++ DFGL+ TH + +G
Sbjct: 142 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIG 190
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
T Y APE V G + DVWS GV LY L++G P +
Sbjct: 191 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGV---QGHKEWMTEVNFLGIVEHQN 148
+G+G FG V +G + PS K V VAVK L + + +++ EVN + ++H+N
Sbjct: 16 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 73 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 126
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 267
L + I RD + N+LL + K+ DFGL R P +V + AP
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 35/279 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG VYK KN E + A K + + + ++++ E+ L +H +VKL
Sbjct: 27 LGDGAFGKVYKA--KNKETGAL---AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 81
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G D + I + E+ P G+VD + + +++ + + L +LH
Sbjct: 82 LGAYYHDGKLWI----MIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSK 136
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+II RD K+ N+L+ + + +L+DFG++ + + +GT + APE V
Sbjct: 137 ---RIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 273 GRLAA-----RSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIV 327
+ ++D+WS G+ L E+ P P + LL+ K SD ++
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIAK---SDPP---TLL 243
Query: 328 DPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
P K+S+ L + L KN TRP +++LE
Sbjct: 244 TP---SKWSVEFRDFL----KIALDKNPETRPSAAQLLE 275
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGV---QGHKEWMTEVNFLGIVEHQN 148
+G+G FG V +G + PS K V VAVK L + + +++ EVN + ++H+N
Sbjct: 20 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 77 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 130
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 267
L + I RD + N+LL + K+ DFGL R P +V + AP
Sbjct: 131 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE-HQNLVK 151
+GEG F K + K S AVK + +R ++ E+ L + E H N+VK
Sbjct: 19 LGEGSFSICRKCVHKKSNQA-----FAVKIISKRMEANTQK---EITALKLCEGHPNIVK 70
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK---SETILTWAMRLKIAQDAARGLAY 208
L D + LV E + G + + + K SET ++ MR ++ +++
Sbjct: 71 LHEVFHDQ----LHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSH 121
Query: 209 LHEGMDFQIIVRDFKSSNILL-DEQWN--AKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 265
+H D ++ RD K N+L DE N K+ DFG ARL P + + T T+ YA
Sbjct: 122 MH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKTPCF-TLHYA 176
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
APE + D+WS GV LY +++G+ P
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 34/219 (15%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ---GHKEWMTEVNFLGIVEHQN 148
V+G+G FG V +D E AVK + +R V+ + + EV L ++H N
Sbjct: 39 VLGKGSFGEVIL-----CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
++KL + D +G L+ Y D+ +S K + + A +I + G+ Y
Sbjct: 94 IMKLYEFFED---KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITY 147
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV-----VG 260
+H+ +I+ RD K N+LL+ + N ++ DFGL+ TH + +G
Sbjct: 148 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIG 196
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
T Y APE V G + DVWS GV LY L++G P +
Sbjct: 197 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGV---QGHKEWMTEVNFLGIVEHQN 148
+G+G FG V +G + PS K V VAVK L + + +++ EVN + ++H+N
Sbjct: 16 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 73 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 126
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 267
L + I RD + N+LL + K+ DFGL R P +V + AP
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV---QGHKEWMTEVNFLG 142
+FS +IG GGFG VY A+K L ++ + QG + E L
Sbjct: 190 DFSVHRIIGRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 143 IVEHQNLVKLVGYCADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
+V + +V C +L + + M G + +LS + + A A +
Sbjct: 245 LVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAE 300
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
GL ++H ++ RD K +NILLDE + ++SD GLA S+ H S VGT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGT 353
Query: 262 MGYAAPEYVQTG-RLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
GY APE +Q G + +D +S G L++L+ G P +++ + + ++
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV---QGHKEWMTEVNFLG 142
+FS +IG GGFG VY A+K L ++ + QG + E L
Sbjct: 190 DFSVHRIIGRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 143 IVEHQNLVKLVGYCADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
+V + +V C +L + + M G + +LS + + A A +
Sbjct: 245 LVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAE 300
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
GL ++H ++ RD K +NILLDE + ++SD GLA S+ H S VGT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGT 353
Query: 262 MGYAAPEYVQTG-RLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
GY APE +Q G + +D +S G L++L+ G P +++ + + ++
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGV---QGHKEWMTEVNFLGIVEHQN 148
+G+G FG V +G + PS K V VAVK L + + +++ EVN + ++H+N
Sbjct: 20 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 77 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 130
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 267
L + I RD + N+LL + K+ DFGL R P +V + AP
Sbjct: 131 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 45/305 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 209
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 132 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 210 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAV 258
+GM+F + I RD + NILL E+ K+ DFGLAR + + A
Sbjct: 189 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 259 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQW 312
+ + + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 249 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 307
Query: 313 VKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 372
P + + ++ ++D C RP SE++E + ++
Sbjct: 308 RAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 346
Query: 373 DASAE 377
A+A+
Sbjct: 347 QANAQ 351
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV---QGHKEWMTEVNFLG 142
+FS +IG GGFG VY A+K L ++ + QG + E L
Sbjct: 190 DFSVHRIIGRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 143 IVEHQNLVKLVGYCADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
+V + +V C +L + + M G + +LS + + A A +
Sbjct: 245 LVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAE 300
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
GL ++H ++ RD K +NILLDE + ++SD GLA S+ H S VGT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGT 353
Query: 262 MGYAAPEYVQTG-RLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
GY APE +Q G + +D +S G L++L+ G P +++ + + ++
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 135 MTEVNFLGIVE-HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
+ EV+ L V H N+++L D E LV++ M G + YL+ K L+
Sbjct: 71 LKEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEK 124
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSEGFT 252
KI + + LH+ I+ RD K NILLD+ N KL+DFG + +L P E
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 181
Query: 253 HVSTAVVGTMGYAAPEYVQTGR------LAARSDVWSYGVFLYELITGRRPI 298
V GT Y APE ++ D+WS GV +Y L+ G P
Sbjct: 182 EVC----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGV---QGHKEWMTEVNFLG 142
+FS +IG GGFG VY A+K L ++ + QG + E L
Sbjct: 189 DFSVHRIIGRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 243
Query: 143 IVEHQNLVKLVGYCADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
+V + +V C +L + + M G + +LS + + A A +
Sbjct: 244 LVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAE 299
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
GL ++H ++ RD K +NILLDE + ++SD GLA S+ H S VGT
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGT 352
Query: 262 MGYAAPEYVQTG-RLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 309
GY APE +Q G + +D +S G L++L+ G P +++ + + ++
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLV 150
IGEG FG V++G+ + E+P+ + VA+K +E ++ E + +H ++V
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ I L G + +L + + L A + A + LAYL
Sbjct: 103 KLIGVITENPVWIIMELCTL-----GELRSFLQVRKYS-LDLASLILYAYQLSTALAYLE 156
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 157 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 212
Query: 271 QTGRLAARSDVWSYGVFLYE-LITGRRPI 298
R + SDVW +GV ++E L+ G +P
Sbjct: 213 NFRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLV 150
IGEG FG V++G+ + E+P+ + VA+K +E ++ E + +H ++V
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ I L G + +L + + L A + A + LAYL
Sbjct: 72 KLIGVITENPVWIIMELCTL-----GELRSFLQVRKYS-LDLASLILYAYQLSTALAYLE 125
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 126 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 181
Query: 271 QTGRLAARSDVWSYGVFLYE-LITGRRPI 298
R + SDVW +GV ++E L+ G +P
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 135 MTEVNFLGIVE-HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 193
+ EV+ L V H N+++L D E LV++ M G + YL+ K L+
Sbjct: 58 LKEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEK 111
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSEGFT 252
KI + + LH+ I+ RD K NILLD+ N KL+DFG + +L P E
Sbjct: 112 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 168
Query: 253 HVSTAVVGTMGYAAPEYVQTGR------LAARSDVWSYGVFLYELITGRRPI 298
V GT Y APE ++ D+WS GV +Y L+ G P
Sbjct: 169 EVC----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLV 150
IGEG FG V++G+ + E+P+ + VA+K +E ++ E + +H ++V
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 77 KLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLE 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 131 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 186
Query: 271 QTGRLAARSDVWSYGVFLYE-LITGRRPI 298
R + SDVW +GV ++E L+ G +P
Sbjct: 187 NFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 35/279 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG VYK KN E + A K + + + ++++ E+ L +H +VKL
Sbjct: 19 LGDGAFGKVYKA--KNKETGAL---AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 73
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+G D + I + E+ P G+VD + + + LT + + L +LH
Sbjct: 74 LGAYYHDGKLWI----MIEFCPGGAVDAIML-ELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+II RD K+ N+L+ + + +L+DFG++ + + +GT + APE V
Sbjct: 129 ---RIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 273 GRLAA-----RSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIV 327
+ ++D+WS G+ L E+ P P + LL+ K SD ++
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIAK---SDPP---TLL 235
Query: 328 DPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
P K+S+ L + L KN TRP +++LE
Sbjct: 236 TP---SKWSVEFRDFL----KIALDKNPETRPSAAQLLE 267
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGV---QGHKEWMTEVNFLGIVEHQN 148
+G+G FG V +G + PS K V VAVK L + + +++ EVN + ++H+N
Sbjct: 26 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 83 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 136
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 267
L + I RD + N+LL + K+ DFGL R P +V + AP
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLV 150
IGEG FG V++G+ + E+P+ + VA+K +E ++ E + +H ++V
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 78 KLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLE 131
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 132 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 187
Query: 271 QTGRLAARSDVWSYGVFLYE-LITGRRPI 298
R + SDVW +GV ++E L+ G +P
Sbjct: 188 NFRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 51/308 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
L+G C + G +++ E+ G++ YL K + + + +D + L
Sbjct: 97 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK---EAPEDLYKDFLTLE 150
Query: 211 ----------EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVS 255
+GM+F + I RD + NILL E+ K+ DFGLAR + +
Sbjct: 151 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 256 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKL 309
A + + + APE + +SDVWS+GV L+E+ + G P ID R ++
Sbjct: 211 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 269
Query: 310 LQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVN 369
+ P + + ++ ++D C RP SE++E +
Sbjct: 270 TRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLG 308
Query: 370 KIVDASAE 377
++ A+A+
Sbjct: 309 NLLQANAQ 316
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
IGEG FG V++G+ + E+P+ V + K V+ ++++ E + +H ++V
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIV 74
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 75 KLIGVITENPV-----WIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLE 128
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 129 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 184
Query: 271 QTGRLAARSDVWSYGVFLYE-LITGRRPI 298
R + SDVW +GV ++E L+ G +P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIVEHQNLV 150
IGEG FG V++G+ + E+P+ + VA+K +E ++ E + +H ++V
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 80 KLIGVITENPV-----WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLE 133
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 134 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 189
Query: 271 QTGRLAARSDVWSYGVFLYE-LITGRRPI 298
R + SDVW +GV ++E L+ G +P
Sbjct: 190 NFRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
IGEG FG V++G+ + E+P+ V + K V+ ++++ E + +H ++VK
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 455
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
L+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 456 LIGVITEN-----PVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLES 509
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 510 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESIN 565
Query: 272 TGRLAARSDVWSYGVFLYE-LITGRRPI 298
R + SDVW +GV ++E L+ G +P
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V KG + + +K E + E N + +++ +V++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQLDNPYIVRM 77
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAY 208
+G C + +LV E G +++YL K + I+ ++ + G+ Y
Sbjct: 78 IGICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 126
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
L E + RD + N+LL Q AK+SDFGL++ L E T + + AP
Sbjct: 127 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAP 183
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E + + +++SDVWS+GV ++E + G++P
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 43/304 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 209
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 210 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
+GM+F + I RD + NILL E+ K+ DFGLAR +
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWV 313
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 373
P + + ++ ++D C RP SE++E + ++
Sbjct: 272 APDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 374 ASAE 377
A+A+
Sbjct: 311 ANAQ 314
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 43/304 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 209
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 86 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 210 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
+GM+F + I RD + NILL E+ K+ DFGLAR +
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWV 313
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 373
P + + ++ ++D C RP SE++E + ++
Sbjct: 263 APDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 374 ASAE 377
A+A+
Sbjct: 302 ANAQ 305
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 59
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 60 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 115 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 167
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 55
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 163
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 23/224 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLG-I 143
N +G G FG V + ++VAVK L KE M+E+ + +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR-------- 195
+H+N+V L+G C G L++ EY G + +L K L ++
Sbjct: 107 GQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 196 ------LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
L + A+G+A+L I RD + N+LL AK+ DFGLAR ++
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
V + + APE + +SDVWSYG+ L+E+ +
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 34/219 (15%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ---GHKEWMTEVNFLGIVEHQN 148
V+G+G FG V L K D E AVK + +R V+ + + EV L ++H N
Sbjct: 56 VLGKGSFGEVI--LCK---DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
++KL + D +G L+ Y D+ +S K + + A +I + G+ Y
Sbjct: 111 IMKLYEFFED---KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITY 164
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV-----VG 260
+H+ +I+ RD K N+LL+ + N ++ DFGL+ TH + +G
Sbjct: 165 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIG 213
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
T Y APE + G + DVWS GV LY L++G P +
Sbjct: 214 TAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 54
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH--- 163
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 43/304 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 209
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 86 NLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 210 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
+GM+F + I RD + NILL E+ K+ DFGLAR +
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWV 313
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 373
P + + ++ ++D C RP SE++E + ++
Sbjct: 263 APDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 374 ASAE 377
A+A+
Sbjct: 302 ANAQ 305
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
+S NF + IGEG G V +++S VAVK++ R Q + EV
Sbjct: 150 RSYLDNF---IKIGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 201
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 202 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 248
Query: 201 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 257
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 249 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 306
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 317
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPL 353
Query: 318 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 354 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 400
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 55
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 163
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 54
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 55 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 162
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 54
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 55 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 162
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 32/273 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IGEG G V K++ +VAVK++ R Q + EV + H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGK-----QVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDM 107
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
DE + V E++ G++ ++ T + + R L+YLH
Sbjct: 108 YSSYLVGDELWV----VMEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLH-- 158
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
+ +I RD KS +ILL KLSDFG E +VGT + APE +
Sbjct: 159 -NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMAPEVISR 215
Query: 273 GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLE 332
D+WS G+ + E+I G P + +P L ++ R + PR++
Sbjct: 216 LPYGTEVDIWSLGIMVIEMIDGEPP-------------YFNEPPLQAMRRIRDSLPPRVK 262
Query: 333 GKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
+ ++ S L +L LV+ R E+L
Sbjct: 263 DLH--KVSSVLRGFLDLMLVREPSQRATAQELL 293
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 34/219 (15%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ---GHKEWMTEVNFLGIVEHQN 148
V+G+G FG V L K D E AVK + +R V+ + + EV L ++H N
Sbjct: 57 VLGKGSFGEVI--LCK---DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
++KL + D +G L+ Y D+ +S K + + A +I + G+ Y
Sbjct: 112 IMKLYEFFED---KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITY 165
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV-----VG 260
+H+ +I+ RD K N+LL+ + N ++ DFGL+ TH + +G
Sbjct: 166 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIG 214
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
T Y APE + G + DVWS GV LY L++G P +
Sbjct: 215 TAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGV---QGHKEWMTEVNFLGIVEHQN 148
+G+G FG V +G + PS K V VAVK L + + +++ EVN + ++H+N
Sbjct: 16 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 73 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 126
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 267
L + I RD + N+LL + K+ DFGL R P V + AP
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 62
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 63 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 118 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 170
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 171 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
IGEG FG V++G+ + E+P+ V + K V+ ++++ E + +H ++VK
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 455
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
L+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 456 LIGVITEN-----PVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLES 509
Query: 212 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 271
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 510 K---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESIN 565
Query: 272 TGRLAARSDVWSYGVFLYE-LITGRRPI 298
R + SDVW +GV ++E L+ G +P
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 62
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 63 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 118 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 170
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 171 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 43/304 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG-HKEWMTEVNFL-GIVEHQNLV 150
+G G FG V + + + VAVK L H+ M+E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 209
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 210 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
+GM+F + I RD + NILL E+ K+ DFGLAR +
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWV 313
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 373
P + + ++ ++D C RP SE++E + ++
Sbjct: 272 APDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 374 ASAE 377
A+A+
Sbjct: 311 ANAQ 314
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
IGEG FG V++G+ + E+P+ V + K V+ ++++ E + +H ++V
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIV 74
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
KL+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 75 KLIGVITENPV-----WIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLE 128
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
+ + RD + N+L+ KL DFGL+R S + + + APE +
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKWMAPESI 184
Query: 271 QTGRLAARSDVWSYGVFLYE-LITGRRPI 298
R + SDVW +GV ++E L+ G +P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 55
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 163
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 18/214 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIV 144
+NF + IGEG +G VYK K + + V + +L + E++ L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT---GEVVALXKIRLDTETEGVPSTAIREISLLKEL 59
Query: 145 EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 204
H N+VKL+ ++ + LV+E++ + + +++ + T + + +
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTM 262
GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V T+
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTL 167
Query: 263 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
Y APE + + + + D+WS G E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 18/214 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIV 144
+NF + IGEG +G VYK K + + V + +L + E++ L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT---GEVVALXKIRLDTETEGVPSTAIREISLLKEL 58
Query: 145 EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 204
H N+VKL+ ++ + LV+E++ + + +++ + T + + +
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTM 262
GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V T+
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTL 166
Query: 263 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
Y APE + + + + D+WS G E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGV---QGHKEWMTEVNFLGIVEHQN 148
+G+G FG V +G + PS K V VAVK L + + +++ EVN + ++H+N
Sbjct: 26 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 83 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 136
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 267
L + I RD + N+LL + K+ DFGL R P V + AP
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 268 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 15/219 (6%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
K +F +G+G FG VY K ++ + QL + GV+ + E+
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEI 67
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+ H N++++ Y D + L+ E+ P G + Y + +
Sbjct: 68 QSHLRHPNILRMYNYFHDRK----RIYLMLEFAPRGEL--YKELQKHGRFDEQRSATFME 121
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 260
+ A L Y HE ++I RD K N+L+ + K++DFG + PS + G
Sbjct: 122 ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----RRXMCG 174
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
T+ Y PE ++ + D+W GV YE + G P D
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 15/219 (6%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
K +F +G+G FG VY K ++ + QL + GV+ + E+
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEI 68
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+ H N++++ Y D + L+ E+ P G + Y + +
Sbjct: 69 QSHLRHPNILRMYNYFHDRK----RIYLMLEFAPRGEL--YKELQKHGRFDEQRSATFME 122
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 260
+ A L Y HE ++I RD K N+L+ + K++DFG + PS + G
Sbjct: 123 ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----RRXMCG 175
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
T+ Y PE ++ + D+W GV YE + G P D
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
+S NF + IGEG G V +++S VAVK++ R Q + EV
Sbjct: 28 RSYLDNF---IKIGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 79
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 80 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 126
Query: 201 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 257
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 127 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 184
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 317
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL 231
Query: 318 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 232 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 278
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNFLGIVEHQN 148
+GEG +G VYK SQ VA+K++ G+ + E++ L + H N
Sbjct: 29 VGEGTYGVVYKA------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPN 80
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+V L+ ER + LV+E+M + + L + +++ + Q RG+A+
Sbjct: 81 IVSLIDVI--HSERCLT--LVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQ-LLRGVAH 134
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTMGYAA 266
H+ +I+ RD K N+L++ KL+DFGLAR G P +TH V T+ Y A
Sbjct: 135 CHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH----EVVTLWYRA 187
Query: 267 PEYVQTGRLAARS-DVWSYGVFLYELITGR 295
P+ + + + S D+WS G E+ITG+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 15/219 (6%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
K +F +G+G FG VY K ++ + QL + GV+ + E+
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEI 67
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+ H N++++ Y D + L+ E+ P G + Y + +
Sbjct: 68 QSHLRHPNILRMYNYFHDRK----RIYLMLEFAPRGEL--YKELQKHGRFDEQRSATFME 121
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 260
+ A L Y HE ++I RD K N+L+ + K++DFG + PS + G
Sbjct: 122 ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----RRXMCG 174
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
T+ Y PE ++ + D+W GV YE + G P D
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
+S NF + IGEG G V +++S VAVK++ R Q + EV
Sbjct: 30 RSYLDNF---IKIGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 81
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 82 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 128
Query: 201 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 257
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 129 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 186
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 317
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL 233
Query: 318 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 234 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 280
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 93 IGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIV-EH 146
+G G FG V + GLIK+ + VAVK L +E M+E+ L + H
Sbjct: 47 LGAGAFGKVVEATAYGLIKSD----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 147 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI-------- 198
N+V L+G C G L++ EY G + +L K ++ + I
Sbjct: 103 MNIVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 199 --------AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 250
+ A+G+A+L I RD + NILL K+ DFGLAR ++
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
V + + APE + SDVWSYG+FL+EL + G P
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNFLGIVEHQN 148
+GEG +G VYK SQ VA+K++ G+ + E++ L + H N
Sbjct: 29 VGEGTYGVVYKA------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPN 80
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+V L+ ER + LV+E+M + + L + +++ + Q RG+A+
Sbjct: 81 IVSLIDVI--HSERCLT--LVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQ-LLRGVAH 134
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTMGYAA 266
H+ +I+ RD K N+L++ KL+DFGLAR G P +TH V T+ Y A
Sbjct: 135 CHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH----EVVTLWYRA 187
Query: 267 PEYVQTGRLAARS-DVWSYGVFLYELITGR 295
P+ + + + S D+WS G E+ITG+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 93 IGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIV-EH 146
+G G FG V + GLIK+ + VAVK L +E M+E+ L + H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSD----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 147 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI-------- 198
N+V L+G C G L++ EY G + +L K ++ + I
Sbjct: 87 MNIVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 199 --------AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 250
+ A+G+A+L I RD + NILL K+ DFGLAR ++
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
V + + APE + SDVWSYG+FL+EL + G P
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 55
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GL++ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 111 QLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 163
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 119/295 (40%), Gaps = 27/295 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
NF IG G F VY+ P +V + L + + + E++ L +
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL--MDAKARADCIKEIDLLKQLN 90
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKSETILTWAMRLKIAQDAA 203
H N++K +D+E I V E G + + + K + ++ K
Sbjct: 91 HPNVIKYYASFIEDNELNI----VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC 146
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
L ++H +++ RD K +N+ + KL D GL R S+ T + ++VGT
Sbjct: 147 SALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK--TTAAHSLVGTPY 201
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 323
Y +PE + +SD+WS G LYE+ + P ++ S K+
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----------LYSLCKKI 250
Query: 324 RQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASAEA 378
Q P L + +L + N+C+ + RP ++ V ++ ++ +A +
Sbjct: 251 EQCDYPPLPSDH---YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 93 IGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIV-EH 146
+G G FG V + GLIK+ + VAVK L +E M+E+ L + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 147 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI-------- 198
N+V L+G C G L++ EY G + +L K ++ + I
Sbjct: 110 MNIVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 199 --------AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 250
+ A+G+A+L I RD + NILL K+ DFGLAR ++
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
V + + APE + SDVWSYG+FL+EL + G P
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 264
L YLHE II RD K N+LLD + + KL+D+G+ + G G T ++ GT Y
Sbjct: 165 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNY 219
Query: 265 AAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
APE ++ D W+ GV ++E++ GR P D
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
+S NF + IGEG G V +++S VAVK++ R Q + EV
Sbjct: 19 RSYLDNFIK---IGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 70
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 71 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 117
Query: 201 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 257
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 118 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 175
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 317
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL 222
Query: 318 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 223 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 269
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 264
L YLHE II RD K N+LLD + + KL+D+G+ + G G T ++ GT Y
Sbjct: 133 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 187
Query: 265 AAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
APE ++ D W+ GV ++E++ GR P D
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
+S NF + IGEG G V +++S VAVK++ R Q + EV
Sbjct: 23 RSYLDNFIK---IGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 74
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 75 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 121
Query: 201 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 257
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 122 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 179
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 317
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL 226
Query: 318 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 227 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 273
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 93 IGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIV-EH 146
+G G FG V + GLIK+ + VAVK L +E M+E+ L + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 147 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI-------- 198
N+V L+G C G L++ EY G + +L K ++ + I
Sbjct: 110 MNIVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 199 --------AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 250
+ A+G+A+L I RD + NILL K+ DFGLAR ++
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
V + + APE + SDVWSYG+FL+EL + G P
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
+S NF + IGEG G V +++S VAVK++ R Q + EV
Sbjct: 73 RSYLDNF---IKIGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 124
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 125 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 171
Query: 201 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 257
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 172 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 229
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 317
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPL 276
Query: 318 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 277 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 323
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 93 IGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGVQGHKE-WMTEVNFLGIV-EH 146
+G G FG V + GLIK+ + VAVK L +E M+E+ L + H
Sbjct: 49 LGAGAFGKVVEATAYGLIKSD----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 147 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI-------- 198
N+V L+G C G L++ EY G + +L K ++ + I
Sbjct: 105 MNIVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 199 --------AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 250
+ A+G+A+L I RD + NILL K+ DFGLAR ++
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
V + + APE + SDVWSYG+FL+EL + G P
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 54
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + ++ + T + +
Sbjct: 55 LKELNHPNIVKLLDVIHTEN----KLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLF 109
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 162
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 34/219 (15%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQ---GHKEWMTEVNFLGIVEHQN 148
V+G+G FG V L K D E AVK + +R V+ + + EV L ++H N
Sbjct: 33 VLGKGSFGEVI--LCK---DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+ KL + D +G L+ Y D+ +S K + + A +I + G+ Y
Sbjct: 88 IXKLYEFFED---KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITY 141
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV-----VG 260
H+ +I+ RD K N+LL+ + N ++ DFGL+ TH + +G
Sbjct: 142 XHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKXKDKIG 190
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
T Y APE V G + DVWS GV LY L++G P +
Sbjct: 191 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 264
L YLHE II RD K N+LLD + + KL+D+G+ + G G T ++ GT Y
Sbjct: 118 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 172
Query: 265 AAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
APE ++ D W+ GV ++E++ GR P D
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 53
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 162
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 163 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 53
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 162
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 163 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 264
L YLHE II RD K N+LLD + + KL+D+G+ + G G T ++ GT Y
Sbjct: 122 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 176
Query: 265 AAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
APE ++ D W+ GV ++E++ GR P D
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 53
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 162
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 163 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 55
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 164
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 56
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 111
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 165
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 55
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 164
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 55
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--- 164
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 57
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 58 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 112
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 113 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 166
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 167 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 54
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--- 163
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 56
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 111
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 112 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 165
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 54
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 55 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 162
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 54
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 55 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 162
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 54
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 163
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM--TEVNFLGIVEHQNLV 150
+G+G +G V++GL VAVK R Q W TE+ ++ H N++
Sbjct: 16 VGKGRYGEVWRGLWHGES-------VAVKIFSSRDEQS---WFRETEIYNTVLLRHDNIL 65
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+ Q L+ Y +GS+ +L ++ L + L++A AA GLA+LH
Sbjct: 66 GFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQT---LEPHLALRLAVSAACGLAHLH 122
Query: 211 -EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV---STAVVGTM 262
E Q I RDFKS N+L+ ++D GLA + S+G ++ + VGT
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMH-SQGSDYLDIGNNPRVGTK 181
Query: 263 GYAAPEY----VQTGRLAAR--SDVWSYGVFLYELITGRRPI 298
Y APE ++T + +D+W++G+ L+E+ RR I
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 20/244 (8%)
Query: 56 SEARPSYPSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
S A P S +RP+ ++ + + + +G G +G V +S D
Sbjct: 22 SAAAPFTMSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVC-----SSYDVKSG 76
Query: 116 VEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 172
+++AVK+L R + + K E+ L ++H+N++ L+ + + + +
Sbjct: 77 LKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTH 136
Query: 173 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 232
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 137 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 190
Query: 233 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT-GRLAARSDVWSYGVFLYEL 291
K+ DFGLAR E T V T Y APE + D+WS G + EL
Sbjct: 191 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAEL 245
Query: 292 ITGR 295
+TGR
Sbjct: 246 LTGR 249
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 53
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 162
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 163 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 56
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSY 111
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--- 165
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNF 140
+NF + IGEG +G VYK K + + VA+K++ GV + E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREISL 56
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 164
Query: 259 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 54
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSY 109
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--- 163
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 53
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + ++ + T + +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSY 108
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--- 162
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 163 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 27/240 (11%)
Query: 64 SMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
SMSQ RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 53
Query: 120 VKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 176
VK+L R + + K E+ L ++H+N++ L+ + + + ++
Sbjct: 54 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 113
Query: 177 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 236
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 114 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 167
Query: 237 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 168 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R IG G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTIGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EYMP G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYMPGGDMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q K++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 27/240 (11%)
Query: 64 SMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
SMSQ RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 63
Query: 120 VKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 176
VK+L R + + K E+ L ++H+N++ L+ + + + ++
Sbjct: 64 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 123
Query: 177 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 236
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 124 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 177
Query: 237 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 178 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R IG G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTIGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EYMP G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYMPGGDMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q K++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 27/240 (11%)
Query: 64 SMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
SMSQ RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 63
Query: 120 VKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 176
VK+L R + + K E+ L ++H+N++ L+ + + + ++
Sbjct: 64 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 123
Query: 177 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 236
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 124 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 177
Query: 237 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 178 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 56
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + ++ + T + +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSY 111
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 112 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 165
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 52/250 (20%)
Query: 73 KEFT--IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSE-----------DPSQKVEVA 119
K FT + +++ ++F VIG G FG V +KN++ + ++ E A
Sbjct: 60 KPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETA 119
Query: 120 VKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV 178
+ R V G +W+T ++ Y DD LV +Y G +
Sbjct: 120 CFREERDVLVNGDSKWITTLH---------------YAFQDDN---NLYLVMDYYVGGDL 161
Query: 179 DQYLSP-----KSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQW 233
LS E + + IA D+ L Y+H RD K NIL+D
Sbjct: 162 LTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNG 212
Query: 234 NAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT-----GRLAARSDVWSYGVFL 288
+ +L+DFG + L E T S+ VGT Y +PE +Q GR D WS GV +
Sbjct: 213 HIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCM 271
Query: 289 YELITGRRPI 298
YE++ G P
Sbjct: 272 YEMLYGETPF 281
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 56
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + ++ + T + +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSY 111
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 165
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 26/240 (10%)
Query: 63 PSMSQRPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
P +RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 53
Query: 120 VKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 176
VK+L R + + K E+ L ++H+N++ L+ + + + ++
Sbjct: 54 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 113
Query: 177 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 236
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 114 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 167
Query: 237 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 168 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 55
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + ++ + T + +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSY 110
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 164
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEV 138
+ +NF + IGEG +G VYK K + + VA+K++ GV + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTA--IREI 56
Query: 139 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
+ L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSY 111
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVST 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 112 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--- 165
Query: 257 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 -EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 27/240 (11%)
Query: 64 SMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
SMSQ RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 53
Query: 120 VKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 176
VK+L R + + K E+ L ++H+N++ L+ + + + ++
Sbjct: 54 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 113
Query: 177 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 236
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 114 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELK 167
Query: 237 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 168 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 29/259 (11%)
Query: 41 GSELTSQNVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGC 100
G +L ++N+ S S+ RP++ TI E+ +N S +G G +G
Sbjct: 10 GVDLGTENLYFQSNASQERPTFYRQELNK------TIWEVPERYQNLSP---VGSGAYGS 60
Query: 101 VYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCA 157
V D + VAVK+L R + + K E+ L ++H+N++ L+ +
Sbjct: 61 VCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 115
Query: 158 DDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQI 217
+ + ++ ++ + K + + ++ I Q RGL Y+H I
Sbjct: 116 ARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DI 169
Query: 218 IVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAA 277
I RD K SN+ ++E K+ DFGLAR E V T Y APE +
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRWYRAPEIMLNWMHYN 224
Query: 278 RS-DVWSYGVFLYELITGR 295
++ D+WS G + EL+TGR
Sbjct: 225 QTVDIWSVGCIMAELLTGR 243
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +QG E+ + ++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQGKAFKNRELQIMRKLD 71
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 130
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 184
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +QG E+ + ++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQGKAFKNRELQIMRKLD 71
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ- 130
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--IC 184
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +QG E+ + ++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQGKAFKNRELQIMRKLD 71
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 130
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 184
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 23/215 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEH 146
++ VIG G FG V++ + S+ EVA+K++ +Q + E+ + IV+H
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESD------EVAIKKV----LQDKRFKNRELQIMRIVKH 91
Query: 147 QNLVKLVG--YCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDA 202
N+V L Y D + + LV EY+P ++ + +T+ ++L + Q
Sbjct: 92 PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ-L 150
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGT 261
R LAY+H I RD K N+LLD KL DFG A++ + G +VS + +
Sbjct: 151 LRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA-GEPNVSX--ICS 204
Query: 262 MGYAAPEYV-QTGRLAARSDVWSYGVFLYELITGR 295
Y APE + D+WS G + EL+ G+
Sbjct: 205 RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 136
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 195 MYEMMCGRLPF 205
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S IG G +G V D + VAVK+L R + + K
Sbjct: 21 TIWEVPERYQNLSP---IGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 72
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 73 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 130
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 131 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--- 183
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 85 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 139
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 140 MLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 197
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 198 MYEMMCGRLPF 208
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 40/182 (21%)
Query: 197 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST 256
KIA + L +LH + +I RD K SN+L++ K+ DFG++ G+ S
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS------GYLVDSV 208
Query: 257 AVV---GTMGYAAPEYV-----QTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQK 308
A G Y APE + Q G + +SD+WS G+ + EL R P D
Sbjct: 209 AKTIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYD--------- 258
Query: 309 LLQWVKPYLSDAKQFRQIVD---PRLEG-KYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
W P+ +Q +Q+V+ P+L K+S V S CL KN++ RP E+
Sbjct: 259 --SWGTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPEL 308
Query: 365 LE 366
++
Sbjct: 309 MQ 310
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 136
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 195 MYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 136
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 195 MYEMMCGRLPF 205
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 136
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 195 MYEMMCGRLPF 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 87 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 141
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 142 MLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 199
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 200 MYEMMCGRLPF 210
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 105
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 164
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 165 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--IC 218
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 136
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 195 MYEMMCGRLPF 205
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 75 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 132
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 133 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--- 185
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 72
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 73 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 130
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 131 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 183
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 18 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 69
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 70 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 127
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 128 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 180
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 181 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 75 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 132
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 133 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--- 185
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 75 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 132
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 133 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--- 185
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 72
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 73 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 130
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 131 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 183
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 13 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 64
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 65 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 122
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 123 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 175
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 176 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 15 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 66
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 67 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 124
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 125 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 177
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 178 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 79
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 80 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 138
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 139 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--IC 192
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 63
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 64 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 121
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 122 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 174
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 175 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 90
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 91 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 149
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 150 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--IC 203
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 75 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 132
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 133 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 185
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+F +IG GGFG V+K K+ D V VK + + EV L ++
Sbjct: 12 DFKEIELIGSGGFGQVFKA--KHRIDGKTYVIKRVKYNNEKAER-------EVKALAKLD 62
Query: 146 HQNLVKLVG------YCADDDERGIQR------LLVYEYMPNGSVDQYLSPKSETILTWA 193
H N+V G Y + + R + E+ G+++Q++ + L
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 194 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
+ L++ + +G+ Y+H ++I RD K SNI L + K+ DFGL ++G
Sbjct: 123 LALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX 179
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI 292
S GT+ Y +PE + + D+++ G+ L EL+
Sbjct: 180 RSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 13 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 64
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 65 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 122
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 123 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 175
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 176 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 39/236 (16%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
V IGEG G V K+S +VAVK + R Q + EV + +H N+V
Sbjct: 51 VKIGEGSTGIVCLAREKHSGR-----QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVV 105
Query: 151 KLV-GYCADDDERGIQRLLVYEYMPNGSVDQYLSP---KSETILTWAMRLKIAQDAARGL 206
++ Y G + ++ E++ G++ +S E I T + + + L
Sbjct: 106 EMYKSYLV-----GEELWVLMEFLQGGALTDIVSQVRLNEEQIAT------VCEAVLQAL 154
Query: 207 AYLH-EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV------V 259
AYLH +G +I RD KS +ILL KLSDFG +S V V
Sbjct: 155 AYLHAQG----VIHRDIKSDSILLTLDGRVKLSDFGFC--------AQISKDVPKRKXLV 202
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 315
GT + APE + A D+WS G+ + E++ G P + P K L+ P
Sbjct: 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP 258
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 14 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 65
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 66 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 123
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 124 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 176
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 177 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 73
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 74 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 131
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 132 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 184
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 73
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 74 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 131
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 132 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 184
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 15/207 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G FG VY K S + Q+ + GV+ + E+ + H N+++L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE--HQLRREIEIQAHLHHPNILRL 88
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
Y D R I L+ EY P G + Y + I ++ A L Y H
Sbjct: 89 YNYFYD--RRRI--YLILEYAPRGEL--YKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 213 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 272
++I RD K N+LL + K++DFG + PS + GT+ Y PE ++
Sbjct: 143 ---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR----RKTMCGTLDYLPPEMIEG 195
Query: 273 GRLAARSDVWSYGVFLYELITGRRPID 299
+ D+W GV YEL+ G P +
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 35/267 (13%)
Query: 114 QKVEVAVKQLGRR--GVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYE 171
Q ++ VK L R + +++ E L I H N++ ++G C L+
Sbjct: 32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC--QSPPAPHPTLITH 89
Query: 172 YMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDE 231
+MP GS+ L + ++ + +K A D ARG+A+LH ++ I S ++++DE
Sbjct: 90 WMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDE 148
Query: 232 QWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ-----TGRLAARSDVWSYGV 286
A++S + F+ S + + APE +Q T R +A D+WS+ V
Sbjct: 149 DMTARISMADVK-------FSFQSPGRMYAPAWVAPEALQKKPEDTNRRSA--DMWSFAV 199
Query: 287 FLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHV 346
L+EL+T R P ++ LS+ + ++ L + +S +
Sbjct: 200 LLWELVT------REVPFAD----------LSNMEIGMKVALEGLRPTIPPGISPHVSKL 243
Query: 347 ANLCLVKNARTRPKMSEVLEMVNKIVD 373
+C+ ++ RPK ++ ++ K+ D
Sbjct: 244 MKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 105
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 164
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 165 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 218
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 27/240 (11%)
Query: 64 SMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
SMSQ RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 63
Query: 120 VKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 176
VK+L + + + K E+ L ++H+N++ L+ + + + ++
Sbjct: 64 VKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 123
Query: 177 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 236
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 124 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 177
Query: 237 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 178 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 27/244 (11%)
Query: 60 PSYPSMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
P MSQ RP+ ++ TI E+ +N S +G G +G V D
Sbjct: 15 PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTG 66
Query: 116 VEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 172
+ VAVK+L R + + K E+ L ++H+N++ L+ + + + +
Sbjct: 67 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 126
Query: 173 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 232
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 127 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 180
Query: 233 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYEL 291
K+ DFGLAR E T V T Y APE + ++ D+WS G + EL
Sbjct: 181 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 292 ITGR 295
+TGR
Sbjct: 236 LTGR 239
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 72
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 73 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 130
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 131 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--- 183
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 27 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 78
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 79 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 136
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 137 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 189
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 190 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 27/244 (11%)
Query: 60 PSYPSMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
P MSQ RP+ ++ TI E+ +N S +G G +G V D
Sbjct: 16 PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTG 67
Query: 116 VEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 172
+ VAVK+L R + + K E+ L ++H+N++ L+ + + + +
Sbjct: 68 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 127
Query: 173 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 232
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 128 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 233 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYEL 291
K+ DFGLAR E T V T Y APE + ++ D+WS G + EL
Sbjct: 182 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 292 ITGR 295
+TGR
Sbjct: 237 LTGR 240
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 99
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 100 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 158
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 159 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 212
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 83
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 142
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 143 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--IC 196
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 107
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 108 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 166
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 167 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 220
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 83
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 142
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 143 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--IC 196
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 39 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 90
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 91 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 148
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 149 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 201
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 202 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 109
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 110 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 168
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 169 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 222
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 27 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 78
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 79 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 136
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 137 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--- 189
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 190 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKEWMTEVNFLGI 143
N+ +IG G +G VY KN+E VA+K++ R + K + E+ L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEK-----NVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
++ +++L DD L + + + + + K+ LT I +
Sbjct: 82 LKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF--KTPIFLTEEHIKTILYNLL 139
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS-------- 255
G ++HE II RD K +N LL++ + K+ DFGLAR SE T++
Sbjct: 140 LGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 256 ------------TAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELIT 293
T+ V T Y APE + +S D+WS G EL+
Sbjct: 197 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 71
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 130
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--IC 184
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 52/250 (20%)
Query: 73 KEFT--IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSE-----------DPSQKVEVA 119
K FT + E++ ++F VIG G FG V +KN+E + ++ E A
Sbjct: 60 KPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 119
Query: 120 VKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV 178
+ R V G +W+T +++ A DE + LV +Y G +
Sbjct: 120 CFREERDVLVNGDCQWITALHY----------------AFQDENHL--YLVMDYYVGGDL 161
Query: 179 DQYLSPKSETILTWAMRLKIAQ-----DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQW 233
LS + + R I + D+ L Y+H RD K N+LLD
Sbjct: 162 LTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNG 212
Query: 234 NAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT-----GRLAARSDVWSYGVFL 288
+ +L+DFG + L ++ T S+ VGT Y +PE +Q G+ D WS GV +
Sbjct: 213 HIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM 271
Query: 289 YELITGRRPI 298
YE++ G P
Sbjct: 272 YEMLYGETPF 281
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 84
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 85 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 143
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 144 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 197
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 71
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 130
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--IC 184
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 72
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 73 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 131
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 132 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--IC 185
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V KE + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY P G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+++D+Q K++DFGLA+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + KS+ +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KSQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGL R E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 71
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 72 HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 130
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--IC 184
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 76
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 77 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 135
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 136 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 189
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 150
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 151 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 209
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 210 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 263
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 52/250 (20%)
Query: 73 KEFT--IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSE-----------DPSQKVEVA 119
K FT + E++ ++F VIG G FG V +KN+E + ++ E A
Sbjct: 76 KPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 135
Query: 120 VKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV 178
+ R V G +W+T +++ A DE + LV +Y G +
Sbjct: 136 CFREERDVLVNGDCQWITALHY----------------AFQDENHL--YLVMDYYVGGDL 177
Query: 179 DQYLSPKSETILTWAMRLKIAQ-----DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQW 233
LS + + R I + D+ L Y+H RD K N+LLD
Sbjct: 178 LTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNG 228
Query: 234 NAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT-----GRLAARSDVWSYGVFL 288
+ +L+DFG + L ++ T S+ VGT Y +PE +Q G+ D WS GV +
Sbjct: 229 HIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM 287
Query: 289 YELITGRRPI 298
YE++ G P
Sbjct: 288 YEMLYGETPF 297
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R IG G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTIGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q K++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 75
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 76 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 134
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 135 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--IC 188
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 73
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 74 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 131
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 132 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE--- 184
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+++ + VIG G FG VY+ + +S + VA+K++ +Q + E+ + ++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKV----LQDKRFKNRELQIMRKLD 71
Query: 146 HQNLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQD 201
H N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ- 130
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVG 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVS--YIC 184
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+ Y APE + S DVWS G L EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 29 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 83
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 84 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 137
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ +T + GT
Sbjct: 138 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPE 189
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 100/246 (40%), Gaps = 52/246 (21%)
Query: 77 IAELKSATKNFSRSVVIGEGGF-----------GCVYKGLIKNSEDPSQKVEVAVKQLGR 125
+ E++ +F VIG G F G VY I N D ++ EV+ + R
Sbjct: 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREER 112
Query: 126 RG-VQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP 184
V G + W+T+++F A DE + LV EY G + LS
Sbjct: 113 DVLVNGDRRWITQLHF----------------AFQDENYL--YLVMEYYVGGDLLTLLSK 154
Query: 185 KSETILTWAMRLKIAQ-----DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSD 239
E I R +A+ D+ L Y+H RD K NILLD + +L+D
Sbjct: 155 FGERIPAEMARFYLAEIVMAIDSVHRLGYVH---------RDIKPDNILLDRCGHIRLAD 205
Query: 240 FGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT-------GRLAARSDVWSYGVFLYELI 292
FG ++G T S VGT Y +PE +Q G D W+ GVF YE+
Sbjct: 206 FGSCLKLRADG-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMF 264
Query: 293 TGRRPI 298
G+ P
Sbjct: 265 YGQTPF 270
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV 258
A + A GL +L II RD K N++LD + + K++DFG+ + +G T +
Sbjct: 448 AAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXF 502
Query: 259 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
GT Y APE + D W++GV LYE++ G+ P +
Sbjct: 503 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 17/254 (6%)
Query: 48 NVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLI 106
++SA + A+PS + + + LKE + T K + R +G+GGF Y+
Sbjct: 5 SMSAAIAKPSAKPSA-HVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITD 63
Query: 107 KNSEDPSQKVEVAVKQLGRRGVQGHKEWM-TEVNFLGIVEHQNLVKLVGYCADDDERGIQ 165
++++ V L + KE M TE+ +++ ++V G+ DDD +
Sbjct: 64 MDTKEVFAGKVVPKSMLLK---PHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYV- 119
Query: 166 RLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSS 225
V E S+ + L + + + R + Q +G+ YLH ++I RD K
Sbjct: 120 ---VLEICRRRSLLE-LHKRRKAVTEPEARYFMRQ-TIQGVQYLHNN---RVIHRDLKLG 171
Query: 226 NILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYG 285
N+ L++ + K+ DFGLA +G + GT Y APE + + D+WS G
Sbjct: 172 NLFLNDDMDVKIGDFGLATKIEFDG--ERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLG 229
Query: 286 VFLYELITGRRPID 299
LY L+ G+ P +
Sbjct: 230 CILYTLLVGKPPFE 243
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 99 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ +T + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 143 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 202
+ H +++ L+ D E LV++ M G + YL+ K L+ I +
Sbjct: 156 VAGHPHIITLI----DSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSL 209
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSEGFTHVSTAVVGT 261
+++LH I+ RD K NILLD+ +LSDFG + L P E + GT
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE----LCGT 262
Query: 262 MGYAAPEYVQTGR------LAARSDVWSYGVFLYELITGRRPI 298
GY APE ++ D+W+ GV L+ L+ G P
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 17/254 (6%)
Query: 48 NVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLI 106
++SA + A+PS + + + LKE + T K + R +G+GGF Y+
Sbjct: 5 SMSAAIAKPSAKPSA-HVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITD 63
Query: 107 KNSEDPSQKVEVAVKQLGRRGVQGHKEWM-TEVNFLGIVEHQNLVKLVGYCADDDERGIQ 165
++++ V L + KE M TE+ +++ ++V G+ DDD +
Sbjct: 64 MDTKEVFAGKVVPKSMLLK---PHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYV- 119
Query: 166 RLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSS 225
V E S+ + L + + + R + Q +G+ YLH ++I RD K
Sbjct: 120 ---VLEICRRRSLLE-LHKRRKAVTEPEARYFMRQ-TIQGVQYLHNN---RVIHRDLKLG 171
Query: 226 NILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYG 285
N+ L++ + K+ DFGLA +G + GT Y APE + + D+WS G
Sbjct: 172 NLFLNDDMDVKIGDFGLATKIEFDG--ERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLG 229
Query: 286 VFLYELITGRRPID 299
LY L+ G+ P +
Sbjct: 230 CILYTLLVGKPPFE 243
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ D+GLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 34/247 (13%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKE--WMTEVNFLGIVEHQNL 149
++G+G FG V K +D + E AVK + + + + EV L ++H N+
Sbjct: 29 MLGKGSFGEVLK-----CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+KL D I V E G + D+ + K + A +I + G+ Y
Sbjct: 84 MKLFEILEDSSSFYI----VGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITY 136
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV--VGTMG 263
+H+ I+ RD K NILL+ + + K+ DFGL S F + +GT
Sbjct: 137 MHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL-----STCFQQNTKMKDRIGTAY 188
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP--YLSDAK 321
Y APE ++ G + DVWS GV LY L++G P ++E +L+ V+ Y D
Sbjct: 189 YIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGKYAFDLP 244
Query: 322 QFRQIVD 328
Q+R I D
Sbjct: 245 QWRTISD 251
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + + + L YLH + ++ RD K N+
Sbjct: 228 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENL 283
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G +G T GT Y APE ++ D W GV
Sbjct: 284 MLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 341
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 342 MYEMMCGRLPF 352
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV 258
A + A GL +L II RD K N++LD + + K++DFG+ + +G T +
Sbjct: 127 AAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXF 181
Query: 259 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
GT Y APE + D W++GV LYE++ G+ P + E +L Q +
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG---EDEDELFQSI 233
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 34/179 (18%)
Query: 197 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST 256
KIA + L +LH + +I RD K SN+L++ K+ DFG++ + +
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 257 AVVGTMGYAAPEYV-----QTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 311
G Y APE + Q G + +SD+WS G+ + EL R P D
Sbjct: 171 ---GCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYD-----------S 215
Query: 312 WVKPYLSDAKQFRQIVD---PRLEG-KYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
W P+ +Q +Q+V+ P+L K+S V S CL KN++ RP E+++
Sbjct: 216 WGTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPELMQ 266
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + + + L YLH + ++ RD K N+
Sbjct: 225 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENL 280
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G +G T GT Y APE ++ D W GV
Sbjct: 281 MLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 338
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 339 MYEMMCGRLPF 349
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D VAVK+L R + + K
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 73
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 74 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 131
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 132 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 184
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D VAVK+L R + + K
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 64 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 121
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 122 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 174
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 175 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 108/255 (42%), Gaps = 35/255 (13%)
Query: 65 MSQRPSNLKEFT-------IAELKSATKN------FSRSVVIGEGGFGCVYKGLIKNSED 111
M+ S++KEF + + +S +N F R +G G FG V L+K+ E
Sbjct: 1 MASNSSDVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKET 58
Query: 112 PSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLL 168
+ A+K L ++ V K+ + E L V LVKL D+ +
Sbjct: 59 GNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS----NLYM 111
Query: 169 VYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNIL 228
V EY+P G + +L A R AQ YLH +I RD K N+L
Sbjct: 112 VMEYVPGGEMFSHLRRIGRFXEPHA-RFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLL 166
Query: 229 LDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFL 288
+D+Q +++DFG A+ + + GT Y APE + + D W+ GV +
Sbjct: 167 IDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 221
Query: 289 YELITGRRPIDRNRP 303
YE+ G P ++P
Sbjct: 222 YEMAAGYPPFFADQP 236
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 29/260 (11%)
Query: 48 NVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLI 106
++SA + A+PS + + + LKE + T K + R +G+GGF Y+
Sbjct: 5 SMSAAIAKPSAKPSA-HVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITD 63
Query: 107 KNSEDPSQKVEVAVKQLGRRGVQGHKEWM-TEVNFLGIVEHQNLVKLVGYCADDD----- 160
++++ +V K + + Q KE M TE+ +++ ++V G+ DDD
Sbjct: 64 MDTKEVFAG-KVVPKSMLLKPHQ--KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVV 120
Query: 161 -ERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIV 219
E +R L+ + +V +E + MR I +G+ YLH ++I
Sbjct: 121 LEICRRRSLLELHKRRKAV-------TEPEARYFMRQTI-----QGVQYLHNN---RVIH 165
Query: 220 RDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS 279
RD K N+ L++ + K+ DFGLA +G + GT Y APE + +
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPNYIAPEVLCKKGHSFEV 223
Query: 280 DVWSYGVFLYELITGRRPID 299
D+WS G LY L+ G+ P +
Sbjct: 224 DIWSLGCILYTLLVGKPPFE 243
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH--KEWMTEVNFLGIVEHQNL 149
++G+G FG V K +D + E AVK + + + + EV L ++H N+
Sbjct: 29 MLGKGSFGEVLK-----CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+KL D I V E G + D+ + K + A +I + G+ Y
Sbjct: 84 MKLFEILEDSSSFYI----VGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITY 136
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV--VGTMG 263
+H+ I+ RD K NILL+ + + K+ DFGL S F + +GT
Sbjct: 137 MHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL-----STCFQQNTKMKDRIGTAY 188
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP--YLSDAK 321
Y APE V G + DVWS GV LY L++G P ++E +L+ V+ Y D
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGKYAFDLP 244
Query: 322 QFRQIVD 328
Q+R I D
Sbjct: 245 QWRTISD 251
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 27/244 (11%)
Query: 60 PSYPSMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
P MSQ RP+ ++ TI E+ +N S +G G +G V D
Sbjct: 15 PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTG 66
Query: 116 VEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 172
VAVK+L R + + K E+ L ++H+N++ L+ + + + +
Sbjct: 67 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 126
Query: 173 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 232
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 127 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 180
Query: 233 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYEL 291
K+ DFGLAR E T V T Y APE + ++ D+WS G + EL
Sbjct: 181 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 292 ITGR 295
+TGR
Sbjct: 236 LTGR 239
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 34/286 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM-TEVNFLGI 143
K F +G G F V + E + K+ AVK + ++ ++G + + E+ L
Sbjct: 22 KIFEFKETLGTGAFSEV----VLAEEKATGKL-FAVKCIPKKALKGKESSIENEIAVLRK 76
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWAMRLKIAQDA 202
++H+N+V L D E LV + + G + D+ + T + ++ DA
Sbjct: 77 IKHENIVAL----EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA 132
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLGPSEGFTHVSTAVV 259
+ YLH I+ RD K N+L DE+ +SDFGL+++ EG V +
Sbjct: 133 ---VYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTAC 183
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLL----QWVK 314
GT GY APE + + D WS GV Y L+ G P D N + +++L ++
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDS 243
Query: 315 PYLSD----AKQF-RQIVDPRLEGKYSLRLVSKLSHVA-NLCLVKN 354
PY D AK F R +++ +Y+ ++ +A + L KN
Sbjct: 244 PYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKN 289
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH--KEWMTEVNFLGIVEHQNL 149
++G+G FG V K +D + E AVK + + + + EV L ++H N+
Sbjct: 29 MLGKGSFGEVLK-----CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+KL D I V E G + D+ + K + A +I + G+ Y
Sbjct: 84 MKLFEILEDSSSFYI----VGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITY 136
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV--VGTMG 263
+H+ I+ RD K NILL+ + + K+ DFGL S F + +GT
Sbjct: 137 MHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL-----STCFQQNTKMKDRIGTAY 188
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP--YLSDAK 321
Y APE V G + DVWS GV LY L++G P ++E +L+ V+ Y D
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGKYAFDLP 244
Query: 322 QFRQIVD 328
Q+R I D
Sbjct: 245 QWRTISD 251
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 32/226 (14%)
Query: 85 KNFSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
+ +R++V IG+G FG V++G + E VAVK R + W E
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE---ERSWFREAEI 87
Query: 141 LGIV--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
V H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+
Sbjct: 88 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKL 144
Query: 199 AQDAARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGF 251
A A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 145 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 204
Query: 252 THVSTAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 291
VGT Y APE + R+D+++ G+ +E+
Sbjct: 205 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 27/244 (11%)
Query: 60 PSYPSMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
P MSQ RP+ ++ TI E+ +N S +G G +G V D
Sbjct: 16 PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTG 67
Query: 116 VEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 172
VAVK+L R + + K E+ L ++H+N++ L+ + + + +
Sbjct: 68 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 127
Query: 173 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 232
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 128 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 233 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYEL 291
K+ DFGLAR E T V T Y APE + ++ D+WS G + EL
Sbjct: 182 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 292 ITGR 295
+TGR
Sbjct: 237 LTGR 240
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 32/226 (14%)
Query: 85 KNFSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
+ +R++V IG+G FG V++G + E VAVK R + W E
Sbjct: 25 RTIARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE---ERSWFREAEI 74
Query: 141 LGIV--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
V H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+
Sbjct: 75 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKL 131
Query: 199 AQDAARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGF 251
A A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 132 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 191
Query: 252 THVSTAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 291
VGT Y APE + R+D+++ G+ +E+
Sbjct: 192 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + + + L YLH + ++ RD K N+
Sbjct: 85 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENL 140
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G +G T GT Y APE ++ D W GV
Sbjct: 141 MLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 198
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 199 MYEMMCGRLPF 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + + + L YLH + ++ RD K N+
Sbjct: 87 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENL 142
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G +G T GT Y APE ++ D W GV
Sbjct: 143 MLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 200
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 201 MYEMMCGRLPF 211
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V KE + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY P G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+++D+Q +++DFGLA+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 108/255 (42%), Gaps = 35/255 (13%)
Query: 65 MSQRPSNLKEFT-------IAELKSATKN------FSRSVVIGEGGFGCVYKGLIKNSED 111
M+ S++KEF + + +S +N F R +G G FG V L+K+ E
Sbjct: 1 MASNSSDVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKET 58
Query: 112 PSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLL 168
+ A+K L ++ V K+ + E L V LVKL D+ +
Sbjct: 59 GNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS----NLYM 111
Query: 169 VYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNIL 228
V EY+P G + +L A R AQ YLH +I RD K N+L
Sbjct: 112 VMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLL 166
Query: 229 LDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFL 288
+D+Q +++DFG A+ + + GT Y APE + + D W+ GV +
Sbjct: 167 IDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 221
Query: 289 YELITGRRPIDRNRP 303
YE+ G P ++P
Sbjct: 222 YEMAAGYPPFFADQP 236
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
V EY G + +LS E + + + L YLH + ++ RD K N+
Sbjct: 86 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENL 141
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 287
+LD+ + K++DFGL + G +G T GT Y APE ++ D W GV
Sbjct: 142 MLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 199
Query: 288 LYELITGRRPI 298
+YE++ GR P
Sbjct: 200 MYEMMCGRLPF 210
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 197 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSEGFTHVS 255
K+ + L YL E +I RD K SNILLDE+ KL DFG++ RL +
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK----AK 181
Query: 256 TAVVGTMGYAAPEYVQ-----TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSE--QK 308
G Y APE + R+DVWS G+ L EL TG+ P + E K
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK 241
Query: 309 LLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
+LQ P L F G + S V + CL K+ R RPK +++LE
Sbjct: 242 VLQEEPPLLPGHMGF--------SGDFQ-------SFVKD-CLTKDHRKRPKYNKLLE 283
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHKETGNH---FAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL Y D+ +V EY+P G + +L A R AQ
Sbjct: 98 VNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFXEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 32/225 (14%)
Query: 86 NFSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFL 141
+R++V IG+G FG V++G + E VAVK R + W E
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE---ERSWFREAEIY 50
Query: 142 GIV--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 199
V H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+A
Sbjct: 51 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLA 107
Query: 200 QDAARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGFT 252
A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 108 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 167
Query: 253 HVSTAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 291
VGT Y APE + R+D+++ G+ +E+
Sbjct: 168 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHKETGNH---FAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL Y D+ +V EY+P G + +L A R AQ
Sbjct: 98 VNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFXEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHKETGNH---FAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL Y D+ +V EY+P G + +L A R AQ
Sbjct: 98 VNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY P G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFXEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+++D+Q K++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 99 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFXEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D VAVK+L R + + K
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K +
Sbjct: 64 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCAKLTDD 121
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 122 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 174
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 175 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY P G + +L A R AQ
Sbjct: 99 VNFPFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+++D+Q K++DFG A+ + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 32/224 (14%)
Query: 87 FSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLG 142
+R++V IG+G FG V++G + E VAVK R + W E
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE---ERSWFREAEIYQ 50
Query: 143 IV--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
V H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+A
Sbjct: 51 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLAL 107
Query: 201 DAARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGFTH 253
A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 167
Query: 254 VSTAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 291
VGT Y APE + R+D+++ G+ +E+
Sbjct: 168 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N + +G G +G V D VAVK+L R + + K
Sbjct: 26 TIWEVPERYQNLAP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 77
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 78 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 135
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 136 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 188
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 189 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 99 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 99 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 64 FERIKTLGTGSFGRVM--LVKHKETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 119 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 172
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 173 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 224
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 32/225 (14%)
Query: 86 NFSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFL 141
+R++V IG+G FG V++G + E VAVK R + W E
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE---ERSWFREAEIY 52
Query: 142 GIV--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 199
V H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+A
Sbjct: 53 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLA 109
Query: 200 QDAARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGFT 252
A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 110 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 169
Query: 253 HVSTAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 291
VGT Y APE + R+D+++ G+ +E+
Sbjct: 170 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 99 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 32/225 (14%)
Query: 86 NFSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFL 141
+R++V IG+G FG V++G + E VAVK R + W E
Sbjct: 6 TIARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE---ERSWFREAEIY 55
Query: 142 GIV--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 199
V H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+A
Sbjct: 56 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLA 112
Query: 200 QDAARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGFT 252
A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 113 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 172
Query: 253 HVSTAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 291
VGT Y APE + R+D+++ G+ +E+
Sbjct: 173 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 137 EVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 196
E+ + ++ H LV L DD+E +++YE+M G + + ++ ++ +
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEM----VMIYEFMSGGELFEKVA-DEHNKMSEDEAV 152
Query: 197 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA--KLSDFGL-ARLGPSEGFTH 253
+ + +GL ++HE + D K NI+ + + KL DFGL A L P +
Sbjct: 153 EYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK- 208
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
GT +AAPE + + +D+WS GV Y L++G P
Sbjct: 209 ---VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 27/226 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE--G 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E G
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG 181
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
F V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 182 F-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 99 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 27/226 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE--G 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E G
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG 181
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
F V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 182 F-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY P G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+++D+Q K++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETIL 190
H+E E++ L ++H N++KL D LV E+ G + + + + +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKK----YFYLVTEFYEGGELFEQIINRHKFDE 145
Query: 191 TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGP 247
A I + G+ YLH+ I+ RD K NILL+ + N K+ DFGL+
Sbjct: 146 CDAAN--IMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 248 SEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 307
+ + +GT Y APE V + + DVWS GV +Y L+ G P +++Q
Sbjct: 201 KD---YKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFG---GQNDQ 253
Query: 308 KLLQWVK--PYLSDAKQFRQIVDPRLE 332
+++ V+ Y D ++ I D E
Sbjct: 254 DIIKKVEKGKYYFDFNDWKNISDEAKE 280
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
L+ +Y+ G + +LS + E +++ + + L +LH+ II RD K NI
Sbjct: 136 LILDYINGGELFTHLSQR-ERFTEHEVQIYVGE-IVLALEHLHK---LGIIYRDIKLENI 190
Query: 228 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDV--WSYG 285
LLD + L+DFGL++ ++ T + GT+ Y AP+ V+ G V WS G
Sbjct: 191 LLDSNGHVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249
Query: 286 VFLYELITGRRPIDRNRPRSEQ-----KLLQWVKPY 316
V +YEL+TG P + ++ Q ++L+ PY
Sbjct: 250 VLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY 285
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+P G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ FGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 42/233 (18%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+F +IG GGFG V+K K+ D V RR +++ EV L ++
Sbjct: 13 DFKEIELIGSGGFGQVFKA--KHRIDGKTYV-------IRRVKYNNEKAEREVKALAKLD 63
Query: 146 HQNLVKLVGYCAD----DDERGIQRLLVYEYMP----------------------NGSVD 179
H N+V G C D D E L +Y P G+++
Sbjct: 64 HVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLE 122
Query: 180 QYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSD 239
Q++ + L + L++ + +G+ Y+H ++I RD K SNI L + K+ D
Sbjct: 123 QWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 240 FGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI 292
FGL ++G T GT+ Y +PE + + D+++ G+ L EL+
Sbjct: 180 FGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 27/226 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D VAVK+L R + + K
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 64 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 121
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE--G 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E G
Sbjct: 122 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG 177
Query: 251 FTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
F V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 178 F-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 137 EVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 196
E+ + ++ H LV L DD+E +++YE+M G + + ++ ++ +
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEM----VMIYEFMSGGELFEKVA-DEHNKMSEDEAV 258
Query: 197 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA--KLSDFGL-ARLGPSEGFTH 253
+ + +GL ++HE + D K NI+ + + KL DFGL A L P +
Sbjct: 259 EYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK- 314
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
GT +AAPE + + +D+WS GV Y L++G P
Sbjct: 315 ---VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
++ ++ + +G+G +G V++G Q VAVK R K W E
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRG-------SWQGENVAVKIFSSRD---EKSWFRETEL 53
Query: 141 LGIV--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 198
V H+N++ + Q L+ Y GS+ YL T L L+I
Sbjct: 54 YNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRI 110
Query: 199 AQDAARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 253
A GLA+LH E Q I RD KS NIL+ + ++D GLA + S+
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH-SQSTNQ 169
Query: 254 VSTAV---VGTMGYAAPEY------VQTGRLAARSDVWSYGVFLYEL 291
+ VGT Y APE V R D+W++G+ L+E+
Sbjct: 170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 27/244 (11%)
Query: 60 PSYPSMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
P MSQ RP+ ++ TI E+ +N S +G G +G V D
Sbjct: 16 PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTG 67
Query: 116 VEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 172
VAVK+L R + + K E+ L ++H+N++ L+ + + + +
Sbjct: 68 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 127
Query: 173 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 232
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 128 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 233 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYEL 291
K+ DFGLAR E V T Y APE + ++ D+WS G + EL
Sbjct: 182 CELKILDFGLARHTDDE-----MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 292 ITGR 295
+TGR
Sbjct: 237 LTGR 240
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ D GLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNL 149
+G+GGF ++ S+ +++V ++ K L + Q K M E++ + HQ++
Sbjct: 25 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHV 79
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
V G+ D+D +V E S+ + L + + + R + Q G YL
Sbjct: 80 VGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYL 133
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H ++I RD K N+ L+E K+ DFGLA +G + GT Y APE
Sbjct: 134 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEV 188
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPID 299
+ + DVWS G +Y L+ G+ P +
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNL 149
+G+GGF ++ S+ +++V ++ K L + Q K M E++ + HQ++
Sbjct: 25 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHV 79
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
V G+ D+D +V E S+ + L + + + R + Q G YL
Sbjct: 80 VGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYL 133
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H ++I RD K N+ L+E K+ DFGLA +G + GT Y APE
Sbjct: 134 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEV 188
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPID 299
+ + DVWS G +Y L+ G+ P +
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 89/215 (41%), Gaps = 30/215 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIV--EHQNLV 150
+G+G +G V++G Q VAVK R K W E V H+N++
Sbjct: 16 VGKGRYGEVWRG-------SWQGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENIL 65
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+ Q L+ Y GS+ YL T L L+I A GLA+LH
Sbjct: 66 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLH 122
Query: 211 -EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV---VGTM 262
E Q I RD KS NIL+ + ++D GLA + S+ + VGT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH-SQSTNQLDVGNNPRVGTK 181
Query: 263 GYAAPEY------VQTGRLAARSDVWSYGVFLYEL 291
Y APE V R D+W++G+ L+E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNL 149
+G+GGF ++ S+ +++V ++ K L + Q K M E++ + HQ++
Sbjct: 47 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHV 101
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
V G+ D+D +V E S+ + L + + + R + Q G YL
Sbjct: 102 VGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYL 155
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H ++I RD K N+ L+E K+ DFGLA +G + GT Y APE
Sbjct: 156 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEV 210
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPID 299
+ + DVWS G +Y L+ G+ P +
Sbjct: 211 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM-TEVNFLGI 143
K + R +G+GGF Y+ ++++ V L + KE M TE+
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK---PHQKEKMSTEIAIHKS 82
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
+++ ++V G+ DDD + V E S+ + L + + + R + Q
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYV----VLEICRRRSLLE-LHKRRKAVTEPEARYFMRQ-TI 136
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
+G+ YLH ++I RD K N+ L++ + K+ DFGLA +G + GT
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPN 191
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 299
Y APE + + D+WS G LY L+ G+ P +
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ D GLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNL 149
+G+GGF ++ S+ +++V ++ K L + Q K M E++ + HQ++
Sbjct: 29 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHV 83
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
V G+ D+D +V E S+ + L + + + R + Q G YL
Sbjct: 84 VGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYL 137
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H ++I RD K N+ L+E K+ DFGLA +G + GT Y APE
Sbjct: 138 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEV 192
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPID 299
+ + DVWS G +Y L+ G+ P +
Sbjct: 193 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNL 149
+G+GGF ++ S+ +++V ++ K L + Q K M E++ + HQ++
Sbjct: 23 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHV 77
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
V G+ D+D +V E S+ + L + + + R + Q G YL
Sbjct: 78 VGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYL 131
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H ++I RD K N+ L+E K+ DFGLA +G + GT Y APE
Sbjct: 132 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEV 186
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPID 299
+ + DVWS G +Y L+ G+ P +
Sbjct: 187 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 27/239 (11%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVVAAYDAILERNVAIKK 56
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + +V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M + G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLV--------GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
K+ DFGLAR + G + + T V T Y APE + D+WS GV + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNL 149
+G+GGF ++ S+ +++V ++ K L + Q K M E++ + HQ++
Sbjct: 49 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHV 103
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
V G+ D+D +V E S+ + L + + + R + Q G YL
Sbjct: 104 VGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYL 157
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
H ++I RD K N+ L+E K+ DFGLA +G + GT Y APE
Sbjct: 158 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEV 212
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPID 299
+ + DVWS G +Y L+ G+ P +
Sbjct: 213 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 22/237 (9%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLG 142
+ +F ++GEG +G V + P+ ++ VA+K++ + E+ L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA----THKPTGEI-VAIKKIEPFDKPLFALRTLREIKILK 64
Query: 143 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 202
+H+N++ + D + + + + + + +S ++ + ++ I Q
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQ-T 121
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL--------GPSEGFTHV 254
R + LH +I RD K SN+L++ + K+ DFGLAR+ G
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 255 STAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRRPIDRNRPRSEQKLL 310
T V T Y APE + T +R+ DVWS G L EL RRPI R Q LL
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V L KL D+ +V EY P G + +L A R AQ
Sbjct: 99 VNFPFLTKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFXEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+++D+Q K++DFG A+ + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 22/237 (9%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLG 142
+ +F ++GEG +G V + P+ ++ VA+K++ + E+ L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA----THKPTGEI-VAIKKIEPFDKPLFALRTLREIKILK 64
Query: 143 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 202
+H+N++ + D + + + + + + +S ++ + ++ I Q
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQ-T 121
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL--------GPSEGFTHV 254
R + LH +I RD K SN+L++ + K+ DFGLAR+ G
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 255 STAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRRPIDRNRPRSEQKLL 310
T V T Y APE + T +R+ DVWS G L EL RRPI R Q LL
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 27/239 (11%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + +V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M + G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLV--------GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
K+ DFGLAR + G + + T V T Y APE + D+WS GV + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 64 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 119 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 172
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ +T + GT
Sbjct: 173 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LCGTPE 224
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 44/232 (18%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL------GRRGVQGHKEWMTEVNFLGIVEH 146
+G+G +G V+K + + + + VAVK++ + +E M G H
Sbjct: 17 LGKGAYGIVWKSIDRRTGEV-----VAVKKIFDAFQNSTDAQRTFREIMILTELSG---H 68
Query: 147 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 206
+N+V L+ D++R + LV++YM D + ++ IL + + + +
Sbjct: 69 ENIVNLLNVLRADNDRDV--YLVFDYM---ETDLHAVIRA-NILEPVHKQYVVYQLIKVI 122
Query: 207 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-------------LGPSEGFTH 253
YLH G ++ RD K SNILL+ + + K++DFGL+R L +E +
Sbjct: 123 KYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 254 ------VSTAVVGTMGYAAPE-YVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ T V T Y APE + + + D+WS G L E++ G +PI
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEH 146
F R +G G FG V L+K+ E + A+K L ++ V K+ +N I +
Sbjct: 44 FERIRTLGTGSFGRVM--LVKHKETGNH---YAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 147 QN---LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
N LVKL D+ +V EY P G + +L A R AQ
Sbjct: 99 VNFPFLVKLEFSFKDNS----NLYMVLEYAPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q K++DFG A+ + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 92/220 (41%), Gaps = 26/220 (11%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGH-KEWMTEVN 139
+ K + + IG G +G++ + D + VAVK+L R Q H K E+
Sbjct: 21 TVLKRYQQLKPIGSGA-----QGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV 75
Query: 140 FLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQYLSPKSETILTWAM 194
L V H+N++ L+ E LV E M + L + + L + M
Sbjct: 76 LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQM 135
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
G+ +LH II RD K SNI++ K+ DFGLAR + +
Sbjct: 136 LC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT---NFM 181
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
T V T Y APE + AA D+WS G + EL+ G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQ--KVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
+G+G F ++KG+ + D Q + EV +K L + + + + + + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
G C DE +LV E++ GS+D YL K++ + +L++A+ A + +L
Sbjct: 76 LNYGVCVCGDEN----ILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMHFLE 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVSTAVVGT-MGYAAPE 268
E +I + + NILL + + K + +L P T + ++ + + PE
Sbjct: 131 EN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 269 YVQTGR-LAARSDVWSYGVFLYELITG 294
++ + L +D WS+G L+E+ +G
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 89/215 (41%), Gaps = 30/215 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIV--EHQNLV 150
+G+G +G V++G Q VAVK R K W E V H+N++
Sbjct: 45 VGKGRYGEVWRG-------SWQGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENIL 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+ Q L+ Y GS+ YL T L L+I A GLA+LH
Sbjct: 95 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLH 151
Query: 211 -EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV---VGTM 262
E Q I RD KS NIL+ + ++D GLA + S+ + VGT
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH-SQSTNQLDVGNNPRVGTK 210
Query: 263 GYAAPEY------VQTGRLAARSDVWSYGVFLYEL 291
Y APE V R D+W++G+ L+E+
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D + VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ D GLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 30 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 85 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 138
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+DEQ +++DFG A+ + + GT
Sbjct: 139 LTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 190
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY P G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+++D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 45/227 (19%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKEWMTEVNFLG 142
K + +G G +G V + K S + +VA+K+L R + K E+ L
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGE-----KVAIKKLSRPFQSEIFAKRAYRELLLLK 78
Query: 143 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV----DQYL-SPKSETILTWAMRLK 197
++H+N++ L+ + P S+ D YL P +T L M LK
Sbjct: 79 HMQHENVIGLLDV----------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLK 122
Query: 198 IAQD--------AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+++ +GL Y+H ++ RD K N+ ++E K+ DFGLAR +E
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + + ++ D+WS G + E++TG+
Sbjct: 180 -----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLV 150
+G G +G V + D +VA+K+L R + K E+ L + H+N++
Sbjct: 33 VGSGAYGAVCSAV-----DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI 87
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
L+ D E Y MP D K E + ++ + Q +GL Y+H
Sbjct: 88 GLLDVFTPD-ETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ-MLKGLRYIH 145
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
II RD K N+ ++E K+ DFGLAR SE V T Y APE +
Sbjct: 146 AA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVI 197
Query: 271 QT-GRLAARSDVWSYGVFLYELITGR 295
R D+WS G + E+ITG+
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKE 133
TI E+ +N S +G G +G V D VAVK+L R + + K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 67
Query: 134 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 192
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 193 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 252
++ I Q RGL Y+H II RD K SN+ ++E K+ DF LAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE--- 178
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V L KL D+ +V EY P G + +L A R AQ
Sbjct: 99 VNFPFLTKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+++D+Q K++DFG A+ + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 18/224 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH--KEWMTEVNFLG 142
+ F+ ++G+G FG V + +K ED S V+VAVK L + +E++ E +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQ-EDGS-FVKVAVKMLKADIIASSDIEEFLREAACMK 80
Query: 143 IVEHQNLVKLVGYCADDDERGIQRL----LVYEYMPNGSVDQYL--SPKSETILTWAMR- 195
+H ++ KLVG +G RL ++ +M +G + +L S E ++
Sbjct: 81 EFDHPHVAKLVGVSLRSRAKG--RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 196 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
++ D A G+ YL I RD + N +L E ++DFGL+R S +
Sbjct: 139 LVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ 195
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 297
A + + A E + SDVW++GV ++E++T G+ P
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V L KL D+ +V EY P G + +L A R AQ
Sbjct: 99 VNFPFLTKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+++D+Q K++DFG A+ + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGKFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNFLGIVEHQN 148
IGEG +G V+K KN E + ++ VA+K++ GV + E+ L ++H+N
Sbjct: 10 IGEGTYGTVFKA--KNRE--THEI-VALKRVRLDDDDEGVPSSA--LREICLLKELKHKN 62
Query: 149 LVKLVGYCADDDERGI------QRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 202
+V+L D + + Q L Y NG +D E + ++ +L
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD------PEIVKSFLFQL------ 110
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF-THVSTAVVGT 261
+GL + H ++ RD K N+L++ KL+DFGLAR + G +A V T
Sbjct: 111 LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLAR---AFGIPVRCYSAEVVT 164
Query: 262 MGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRRPI 298
+ Y P+ + +L + S D+WS G EL RP+
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 18 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 71
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 72 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 125
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 126 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 179
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 38 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 93 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAAQ-IV 146
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 147 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 198
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 54/240 (22%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+F V+G+G FG V K +N+ D A+K++ R + ++EV L +
Sbjct: 7 DFEEIAVLGQGAFGQVVKA--RNALDSRY---YAIKKI-RHTEEKLSTILSEVMLLASLN 60
Query: 146 HQNLVKLVGYCADDDERGIQR-----------LLVYEYMPNGSVDQYLSPKSETILT--- 191
HQ +V+ Y A + R + + EY NG++ Y SE +
Sbjct: 61 HQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL--YDLIHSENLNQQRD 116
Query: 192 --WAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR----- 244
W + +I + L+Y+H II RD K NI +DE N K+ DFGLA+
Sbjct: 117 EYWRLFRQILE----ALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 245 -----------LGPSEGFTHVSTAVVGTMGYAAPEYVQ-TGRLAARSDVWSYGVFLYELI 292
G S+ T+ +GT Y A E + TG + D++S G+ +E+I
Sbjct: 170 LDILKLDSQNLPGSSDNL----TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 18 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 71
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 72 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 125
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 126 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 179
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 22/237 (9%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLG 142
+ +F ++GEG +G V + P+ ++ VA+K++ + E+ L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA----THKPTGEI-VAIKKIEPFDKPLFALRTLREIKILK 64
Query: 143 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 202
+H+N++ + D + + + + + + +S ++ + ++ I Q
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQ-T 121
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL------GPSEGFTHVST 256
R + LH +I RD K SN+L++ + K+ DFGLAR+ SE S
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 257 AV--VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRRPIDRNRPRSEQKLL 310
V V T Y APE + T +R+ DVWS G L EL RRPI R Q LL
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFAEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 64 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 119 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAAQ-IV 172
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 173 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 224
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 34/179 (18%)
Query: 197 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST 256
KIA + L +LH + +I RD K SN+L++ K DFG++ + +
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 257 AVVGTMGYAAPEYV-----QTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 311
G Y APE + Q G + +SD+WS G+ EL R P D
Sbjct: 198 ---GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYD-----------S 242
Query: 312 WVKPYLSDAKQFRQIVD---PRLEG-KYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
W P+ +Q +Q+V+ P+L K+S V S CL KN++ RP E+ +
Sbjct: 243 WGTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPELXQ 293
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQ--KVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
+G+G F ++KG+ + D Q + EV +K L + + + + + + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
G C DE +LV E++ GS+D YL K++ + +L++A+ A + +L
Sbjct: 76 LNYGVCFCGDEN----ILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAWAMHFLE 130
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVSTAVVGT-MGYAAPE 268
E +I + + NILL + + K + +L P T + ++ + + PE
Sbjct: 131 EN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 269 YVQTGR-LAARSDVWSYGVFLYELITG 294
++ + L +D WS+G L+E+ +G
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGVFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++GEG +G V K ++D + V + K M E+ L + H+NLV
Sbjct: 32 LVGEGSYGMVMKC---RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVN 88
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQY-LSPKSETILTWAMRLKIAQDAARGLAYLH 210
L+ C ++ + LV+E++ + +D L P L + + K G+ + H
Sbjct: 89 LLEVC----KKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCH 141
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE-Y 269
II RD K NIL+ + KL DFG AR + G V V T Y APE
Sbjct: 142 S---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--EVYDDEVATRWYRAPELL 196
Query: 270 VQTGRLAARSDVWSYGVFLYELITG 294
V + DVW+ G + E+ G
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 125 RRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP 184
RRGV +E EVN L + H N++ L D E +L+ E + G + +L+
Sbjct: 54 RRGV-SREEIEREVNILREIRHPNIITL----HDIFENKTDVVLILELVSGGELFDFLAE 108
Query: 185 KSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQW----NAKLSDF 240
K LT + + G+ YLH +I D K NI+L ++ KL DF
Sbjct: 109 KES--LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 163
Query: 241 GLA-RLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
G+A ++ F ++ GT + APE V L +D+WS GV Y L++G P
Sbjct: 164 GIAHKIEAGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG--RRGVQGHKEWMTEVNFLGIVEHQNLV 150
+G G F V K K + + ++L RRGV +E EVN L + H N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGV-SREEIEREVNILREIRHPNII 71
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
L D E +L+ E + G + +L+ K LT + + G+ YLH
Sbjct: 72 TL----HDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLH 125
Query: 211 EGMDFQIIVRDFKSSNILLDEQW----NAKLSDFGLA-RLGPSEGFTHVSTAVVGTMGYA 265
+I D K NI+L ++ KL DFG+A ++ F ++ GT +
Sbjct: 126 SK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI----FGTPEFV 178
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
APE V L +D+WS GV Y L++G P
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLAGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G FG V++ + E + +V VA K + E++ + + H L+ L
Sbjct: 59 LGSGAFGVVHRCV----EKATGRVFVA-KFINTPYPLDKYTVKNEISIMNQLHHPKLINL 113
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
D E + +L+ E++ G + ++ + + ++ A + + A GL ++HE
Sbjct: 114 ----HDAFEDKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHE- 167
Query: 213 MDFQIIVRDFKSSNILLDEQ--WNAKLSDFGLA-RLGPSEGFTHVSTAVVGTMGYAAPEY 269
I+ D K NI+ + + + K+ DFGLA +L P E V+TA T +AAPE
Sbjct: 168 --HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTA---TAEFAAPEI 221
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPI 298
V + +D+W+ GV Y L++G P
Sbjct: 222 VDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 44 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 99 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 152
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 204
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 27/239 (11%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + +V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M + G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLV--------GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 125 RRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP 184
RRGV +E EVN L + H N++ L D E +L+ E + G + +L+
Sbjct: 68 RRGVS-REEIEREVNILREIRHPNIITL----HDIFENKTDVVLILELVSGGELFDFLAE 122
Query: 185 KSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQW----NAKLSDF 240
K LT + + G+ YLH +I D K NI+L ++ KL DF
Sbjct: 123 KES--LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 177
Query: 241 GLA-RLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
G+A ++ F ++ GT + APE V L +D+WS GV Y L++G P
Sbjct: 178 GIAHKIEAGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 42/218 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLV 150
+G G +G V ++ D + +VAVK+L R + + + E+ L ++H+N++
Sbjct: 28 VGSGAYGSVC-----SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 82
Query: 151 KLVGY------CADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 204
L+ D E + L+ + N Q LS + L + + R
Sbjct: 83 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL--------LR 134
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 264
GL Y+H II RD K SN+ ++E ++ DFGLAR E T V T Y
Sbjct: 135 GLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRWY 186
Query: 265 AAPE-------YVQTGRLAARSDVWSYGVFLYELITGR 295
APE Y QT D+WS G + EL+ G+
Sbjct: 187 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGK 218
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLXGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 114/284 (40%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 15 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 66
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLA 207
V G+ G+ RLL + P+ V + + P + R + ++ AR
Sbjct: 67 KVSSGFS------GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 208 Y-----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 176
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 177 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 226
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 227 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S ++ A K + RRGV ++ EV+ L ++
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQ 72
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L + E +L+ E + G + +L+ K LT + + G
Sbjct: 73 HPNVITL----HEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGT 180
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 42/218 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLV 150
+G G +G V ++ D + +VAVK+L R + + + E+ L ++H+N++
Sbjct: 36 VGSGAYGSVC-----SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 151 KLVGY------CADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 204
L+ D E + L+ + N Q LS + L + + R
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQL--------LR 142
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 264
GL Y+H II RD K SN+ ++E ++ DFGLAR E T V T Y
Sbjct: 143 GLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWY 194
Query: 265 AAPE-------YVQTGRLAARSDVWSYGVFLYELITGR 295
APE Y QT D+WS G + EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGK 226
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P + P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 27/239 (11%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + +V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 35/267 (13%)
Query: 114 QKVEVAVKQLGRR--GVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYE 171
Q ++ VK L R + +++ E L I H N++ ++G C L+
Sbjct: 32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC--QSPPAPHPTLITH 89
Query: 172 YMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDE 231
+ P GS+ L + ++ + +K A D ARG A+LH ++ I S ++ +DE
Sbjct: 90 WXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNSRSVXIDE 148
Query: 232 QWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ-----TGRLAARSDVWSYGV 286
A++S + F+ S + APE +Q T R +A D WS+ V
Sbjct: 149 DXTARISXADVK-------FSFQSPGRXYAPAWVAPEALQKKPEDTNRRSA--DXWSFAV 199
Query: 287 FLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHV 346
L+EL+T P LS+ + ++ L + +S +
Sbjct: 200 LLWELVTREVPFAD----------------LSNXEIGXKVALEGLRPTIPPGISPHVSKL 243
Query: 347 ANLCLVKNARTRPKMSEVLEMVNKIVD 373
+C ++ RPK ++ ++ K D
Sbjct: 244 XKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 40/215 (18%)
Query: 93 IGEGGFGCVYKGLIKNSEDPS-QKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
IGEG +G VYK E + +K+ + + G + E++ L ++H N+VK
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-----IREISILKELKHSNIVK 64
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP---------KSETILTWAMRLKIAQDA 202
L D + +LV+E++ DQ L +S T ++ ++L
Sbjct: 65 LY----DVIHTKKRLVLVFEHL-----DQDLKKLLDVCEGGLESVTAKSFLLQL------ 109
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 260
G+AY H D +++ RD K N+L++ + K++DFGLAR G P +TH V
Sbjct: 110 LNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EVV 162
Query: 261 TMGYAAPEYVQ-TGRLAARSDVWSYGVFLYELITG 294
T+ Y AP+ + + + + D+WS G E++ G
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 40/215 (18%)
Query: 93 IGEGGFGCVYKGLIKNSEDPS-QKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
IGEG +G VYK E + +K+ + + G + E++ L ++H N+VK
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-----IREISILKELKHSNIVK 64
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP---------KSETILTWAMRLKIAQDA 202
L D + +LV+E++ DQ L +S T ++ ++L
Sbjct: 65 LY----DVIHTKKRLVLVFEHL-----DQDLKKLLDVCEGGLESVTAKSFLLQL------ 109
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 260
G+AY H D +++ RD K N+L++ + K++DFGLAR G P +TH V
Sbjct: 110 LNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EVV 162
Query: 261 TMGYAAPEYVQ-TGRLAARSDVWSYGVFLYELITG 294
T+ Y AP+ + + + + D+WS G E++ G
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM-TEVNFLGIVEHQNLVK 151
+G G FG V+ L+ E+ S +E +K + + Q E + E+ L ++H N++K
Sbjct: 30 LGSGAFGDVH--LV---EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSE-TILTWAMRLKIAQDAARGLAYL 209
+ D I V E G + ++ +S ++ L+ ++ + LAY
Sbjct: 85 IFEVFEDYHNMYI----VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 210 HEGMDFQIIVRDFKSSNILLDE---QWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAA 266
H ++ +D K NIL + K+ DFGLA L S+ ST GT Y A
Sbjct: 141 HSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMA 194
Query: 267 PEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
PE + + + D+WS GV +Y L+TG P
Sbjct: 195 PEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 124/295 (42%), Gaps = 26/295 (8%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLG-IVEHQNLV 150
V+ EGGF VY+ ++D E A+K+L + ++ + EV F+ + H N+V
Sbjct: 35 VLAEGGFAFVYE-----AQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89
Query: 151 KLVGYCA---DDDERGIQRLLVYEYMPNGSVDQYLSP-KSETILTWAMRLKIAQDAARGL 206
+ + ++ + G L+ + G + ++L +S L+ LKI R +
Sbjct: 90 QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 207 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVV---- 259
++H II RD K N+LL Q KL DFG A P ++ A+V
Sbjct: 150 QHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 260 ---GTMGYAAPEYVQTGR---LAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 313
T Y PE + + + D+W+ G LY L + P + +
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSI 268
Query: 314 KPYLSDAKQFRQIVDPRLEGKYSLRL-VSKLSH-VANLCLVKNARTRPKMSEVLE 366
P+ + F ++ L+ RL ++++ H + + +N + ++E+LE
Sbjct: 269 PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLE 323
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 16/226 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
VIG+G F V + + + + V V + ++ E + +++H ++V+
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSET--ILTWAMRLKIAQDAARGLAYL 209
L+ + D +V+E+M + + +++ + + A+ + L Y
Sbjct: 91 LLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVVGTMGYA 265
H D II RD K N+LL + N+ KL DFG+A +LG S V+ VGT +
Sbjct: 147 H---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES---GLVAGGRVGTPHFM 200
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 311
APE V+ DVW GV L+ L++G P + R + +++
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 36/234 (15%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKEWMTEVNFLGI 143
N+ +IG G +G VY KN+ VA+K++ R + K + E+ L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANK-----NVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
++ +++L +D L + + + + + K+ LT I +
Sbjct: 84 LKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLF--KTPIFLTEQHVKTILYNLL 141
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS-------- 255
G ++HE II RD K +N LL++ + K+ DFGLAR S+ H+
Sbjct: 142 LGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEE 198
Query: 256 ---------------TAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELIT 293
T+ V T Y APE + S D+WS G EL+
Sbjct: 199 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+++D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 19/225 (8%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
V+G GGFG V+ +K + + + + +G++ M E L V + +V
Sbjct: 192 VLGRGGFGEVFACQMKATG--KLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA--ARGLAYL 209
L A E LV M G + ++ E + I A GL +L
Sbjct: 250 L----AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVSTAVVGTMGYAA 266
H+ II RD K N+LLD+ N ++SD GLA + G ++ + GT G+ A
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGTPGFMA 357
Query: 267 PEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 311
PE + D ++ GV LYE+I R P + E K L+
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F ++K + S +E A K + RRGV +E EV+ L V
Sbjct: 20 LGSGQFA-----IVKKCREKSTGLEYAAKFIKKRQSRASRRGV-SREEIEREVSILRQVL 73
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L D E +L+ E + G + +L+ K L+ + G
Sbjct: 74 HHNVITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 206 LAYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 128 VNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGT 181
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 40/215 (18%)
Query: 93 IGEGGFGCVYKGLIKNSEDPS-QKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
IGEG +G VYK E + +K+ + + G + E++ L ++H N+VK
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-----IREISILKELKHSNIVK 64
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP---------KSETILTWAMRLKIAQDA 202
L D + +LV+E++ DQ L +S T ++ ++L
Sbjct: 65 LY----DVIHTKKRLVLVFEHL-----DQDLKKLLDVCEGGLESVTAKSFLLQL------ 109
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 260
G+AY H D +++ RD K N+L++ + K++DFGLAR G P +TH +
Sbjct: 110 LNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EIV 162
Query: 261 TMGYAAPEYVQ-TGRLAARSDVWSYGVFLYELITG 294
T+ Y AP+ + + + + D+WS G E++ G
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 27/239 (11%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y APE + + D W+ GV +Y++ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F ++K + S +E A K + RRGV +E EV+ L V
Sbjct: 20 LGSGQFA-----IVKKCREKSTGLEYAAKFIKKRQSRASRRGV-SREEIEREVSILRQVL 73
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L D E +L+ E + G + +L+ K L+ + G
Sbjct: 74 HHNVITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 206 LAYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 128 VNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGT 181
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIV 144
K F V+G G F V+ L+K + + K+ A+K + + E+ L +
Sbjct: 9 KTFIFMEVLGSGAFSEVF--LVK--QRLTGKL-FALKCIKKSPAFRDSSLENEIAVLKKI 63
Query: 145 EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWAMRLKIAQDAA 203
+H+N+V L D E LV + + G + D+ L + T + Q
Sbjct: 64 KHENIVTL----EDIYESTTHYYLVMQLVSGGELFDRILE---RGVYTEKDASLVIQQVL 116
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNIL-LDEQWNAKL--SDFGLARLGPSEGFTHVSTAVVG 260
+ YLHE I+ RD K N+L L + N+K+ +DFGL+++ E +STA G
Sbjct: 117 SAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTAC-G 169
Query: 261 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 314
T GY APE + + D WS GV Y L+ G P +E KL + +K
Sbjct: 170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF---YEETESKLFEKIK 220
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVSTAVVGT 261
GL +LH+ II RD K N+LLD+ N ++SD GLA + G ++ + GT
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGT 352
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 311
G+ APE + D ++ GV LYE+I R P + E K L+
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVSTAVVGT 261
GL +LH+ II RD K N+LLD+ N ++SD GLA + G ++ + GT
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGT 352
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 311
G+ APE + D ++ GV LYE+I R P + E K L+
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVSTAVVGT 261
GL +LH+ II RD K N+LLD+ N ++SD GLA + G ++ + GT
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGT 352
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 311
G+ APE + D ++ GV LYE+I R P + E K L+
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG--RRGVQGHKEWMTEVNFLGIVEHQNLV 150
+G G F V + + K S E A K L RRG E + E+ ++E
Sbjct: 37 LGRGKFAVVRQCISK-----STGQEYAAKFLKKRRRGQDCRAEILHEI---AVLELAKSC 88
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
V + E + +L+ EY G + P+ +++ +++ + G+ YLH
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 211 EGMDFQIIVRDFKSSNILLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 267
+ I+ D K NILL + + K+ DFG++R G ++GT Y AP
Sbjct: 149 QN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR---KIGHACELREIMGTPEYLAP 202
Query: 268 EYVQTGRLAARSDVWSYGVFLYELITGRRP 297
E + + +D+W+ G+ Y L+T P
Sbjct: 203 EILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 42/218 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNLV 150
+G G +G V ++ D + +VAVK+L R + + + E+ L ++H+N++
Sbjct: 36 VGSGAYGSVC-----SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 151 KLVGY------CADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 204
L+ D E + L+ + N Q LS + L + + R
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL--------LR 142
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 264
GL Y+H II RD K SN+ ++E ++ DFGLAR E T V T Y
Sbjct: 143 GLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWY 194
Query: 265 AAPE-------YVQTGRLAARSDVWSYGVFLYELITGR 295
APE Y QT D+WS G + EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGK 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 28/251 (11%)
Query: 71 NLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG 130
NL +A T ++ +G+G F V + + K P+Q+ + + +
Sbjct: 17 NLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKT---PTQEYAAKIINTKKLSARD 73
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETIL 190
H++ E +++H N+V+L + E G LV++ + G + E I+
Sbjct: 74 HQKLEREARICRLLKHPNIVRLHDSIS---EEGFH-YLVFDLVTGGEL-------FEDIV 122
Query: 191 TWAMRLKIAQDAARGLAYLHEGMDF----QIIVRDFKSSNILLDEQWNA---KLSDFGLA 243
A DA+ + + E ++ I+ RD K N+LL + KL+DFGLA
Sbjct: 123 --AREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
Query: 244 RLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
+G GT GY +PE ++ D+W+ GV LY L+ G P
Sbjct: 181 I--EVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF---WD 235
Query: 304 RSEQKLLQWVK 314
+ KL Q +K
Sbjct: 236 EDQHKLYQQIK 246
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQG--HKEWMTEVNFLGIVEHQN 148
+ IG G F VYKGL D VEVA +L R + + + E L ++H N
Sbjct: 32 IEIGRGSFKTVYKGL-----DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 149 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS----PKSETILTWAMRLKIAQDAAR 204
+V+ + +LV E +G++ YL K + + +W ++ +
Sbjct: 87 IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LK 140
Query: 205 GLAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
GL +LH II RD K NI + + K+ D GLA L + + AV+GT
Sbjct: 141 GLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA----SFAKAVIGTPE 195
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID--RNRPRSEQKLLQWVKP 315
+ APE + + DV+++G E T P +N + +++ VKP
Sbjct: 196 FXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKP 248
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGVQGHKEWMTEVNFLGIVEHQN 148
IGEG +G V+K KN E + ++ VA+K++ GV + E+ L ++H+N
Sbjct: 10 IGEGTYGTVFKA--KNRE--THEI-VALKRVRLDDDDEGVPSSA--LREICLLKELKHKN 62
Query: 149 LVKLVGYCADDDERGI------QRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 202
+V+L D + + Q L Y NG +D E + ++ +L
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD------PEIVKSFLFQL------ 110
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF-THVSTAVVGT 261
+GL + H ++ RD K N+L++ KL++FGLAR + G +A V T
Sbjct: 111 LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLAR---AFGIPVRCYSAEVVT 164
Query: 262 MGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRRPI 298
+ Y P+ + +L + S D+WS G EL RP+
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVK-------QLGRRGVQGHKEWMTEVNFLGIVE 145
+G G F ++K + S +E A K + RRGV +E EV+ L V
Sbjct: 20 LGSGQFA-----IVKKCREKSTGLEYAAKFIKKRQSRASRRGV-CREEIEREVSILRQVL 73
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L D E +L+ E + G + +L+ K L+ + G
Sbjct: 74 HPNIITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 206 LAYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 128 VNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGT 181
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 27/239 (11%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S +E A K + RRGV +E EV+ L V
Sbjct: 20 LGSGQFAIV-----KKCREKSTGLEYAAKFIKKRQSRASRRGV-SREEIEREVSILRQVL 73
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L D E +L+ E + G + +L+ K L+ + G
Sbjct: 74 HHNVITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 206 LAYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 128 VNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGT 181
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 45/227 (19%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKEWMTEVNFLG 142
K + +G G +G V + K S + +VA+K+L R + K E+ L
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGE-----KVAIKKLSRPFQSEIFAKRAYRELLLLK 96
Query: 143 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV----DQYL-SPKSETILTWAMRLK 197
++H+N++ L+ + P S+ D YL P +T L M ++
Sbjct: 97 HMQHENVIGLLDV----------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGME 140
Query: 198 IAQD--------AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 249
+++ +GL Y+H ++ RD K N+ ++E K+ DFGLAR +E
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 197
Query: 250 GFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
T V T Y APE + + ++ D+WS G + E++TG+
Sbjct: 198 -----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S +E A K + RRGV +E EV+ L V
Sbjct: 20 LGSGQFAIV-----KKCREKSTGLEYAAKFIKKRQSRASRRGV-SREEIEREVSILRQVL 73
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L D E +L+ E + G + +L+ K L+ + G
Sbjct: 74 HHNVITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 206 LAYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 128 VNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGT 181
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 27/239 (11%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGRR-G 127
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 41 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100
Query: 128 VQGH-KEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 181
Q H K E+ + V H+N++ L+ E LV E M +
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 160
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 161 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 295
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 210 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 296 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 312
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 27/239 (11%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 3 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 57
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 58 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 117
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 118 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 166
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 167 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 30 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 81
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 82 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 191
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 241
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 242 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 27/239 (11%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGRR-G 127
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 41 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100
Query: 128 VQGH-KEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 181
Q H K E+ + V H+N++ L+ E LV E M +
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 160
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 161 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 295
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 210 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 296 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 312
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 27/239 (11%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 98 FGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKLV---- 153
GC GL+ ++ D VA+K++ Q K + E+ + ++H N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 154 --GYCADDDERGIQRL----LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLA 207
G DD + L +V EYM + + +L RL + Q RGL
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL---EQGPLLEEHARLFMYQ-LLRGLK 134
Query: 208 YLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMGY 264
Y+H ++ RD K +N+ ++ E K+ DFGLAR + P H+S +V T Y
Sbjct: 135 YIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWY 190
Query: 265 AAPEYVQTGRLAARS-DVWSYGVFLYELITGR 295
+P + + ++ D+W+ G E++TG+
Sbjct: 191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGRR-G 127
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 2 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 61
Query: 128 VQGH-KEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 181
Q H K E+ + V H+N++ L+ E LV E M +
Sbjct: 62 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 121
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 122 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 170
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 295
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 171 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
Query: 296 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 228 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 273
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGRR-G 127
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 128 VQGH-KEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 181
Q H K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 295
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 296 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGVQGHKEWMTEVNFLGIVE 145
+G G F V K + S +E A K + RRGV +E EV+ L V
Sbjct: 20 LGSGQFAIV-----KKCREKSTGLEYAAKFIKKRQSRASRRGV-SREEIEREVSILRQVL 73
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 205
H N++ L D E +L+ E + G + +L+ K L+ + G
Sbjct: 74 HHNVITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 206 LAYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 128 VNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGT 181
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 297
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 31 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 82
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 83 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 192
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 242
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 243 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 15 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 66
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLA 207
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 67 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 208 Y-----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 176
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 177 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 226
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 227 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGRR-G 127
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 128 VQGH-KEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 181
Q H K E+ + V H+N++ L+ E LV E M +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 123
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 124 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 295
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 173 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 296 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 275
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 16 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 67
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLA 207
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 68 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 208 Y-----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 177
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 227
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 228 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGRR-G 127
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 128 VQGH-KEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 181
Q H K E+ + V H+N++ L+ E LV E M +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 123
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 124 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 295
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 173 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 296 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 275
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGRR-G 127
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 128 VQGH-KEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 181
Q H K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 295
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 296 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 43 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 94
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 95 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 204
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 254
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 255 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 16 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 67
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLA 207
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 68 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 208 Y-----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 177
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 227
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 228 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
Y AP + + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 16 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 67
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLA 207
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 68 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 208 Y-----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 177
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 227
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 228 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 50 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 101
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 102 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 155
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 211
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 261
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 262 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 58 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 109
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 110 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 219
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 269
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 270 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 14 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 65
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLA 207
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 66 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 119
Query: 208 Y-----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 120 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 175
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 176 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 225
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 226 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGRR-G 127
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 128 VQGH-KEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 181
Q H K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQM--------LXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 295
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 296 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 54/240 (22%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+F V+G+G FG V K +N+ D A+K++ R + ++EV L +
Sbjct: 7 DFEEIAVLGQGAFGQVVKA--RNALDSRY---YAIKKI-RHTEEKLSTILSEVMLLASLN 60
Query: 146 HQNLVKLVGYCADDDERGIQR-----------LLVYEYMPNGSVDQYLSPKSETILT--- 191
HQ +V+ Y A + R + + EY N ++ Y SE +
Sbjct: 61 HQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL--YDLIHSENLNQQRD 116
Query: 192 --WAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR----- 244
W + +I + L+Y+H II RD K NI +DE N K+ DFGLA+
Sbjct: 117 EYWRLFRQILE----ALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 245 -----------LGPSEGFTHVSTAVVGTMGYAAPEYVQ-TGRLAARSDVWSYGVFLYELI 292
G S+ T+ +GT Y A E + TG + D++S G+ +E+I
Sbjct: 170 LDILKLDSQNLPGSSDNL----TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 44 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 95
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 96 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 205
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQ 253
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 254 VFFRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 44 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 95
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 96 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 205
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQ 253
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 254 VFFRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 43 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 94
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 95 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 204
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQ 252
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 253 VFFRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 43 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 94
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 95 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 204
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQ 252
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 253 VFFRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGRR-G 127
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 128 VQGH-KEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 181
Q H K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQM--------LXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 295
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 296 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 91/220 (41%), Gaps = 26/220 (11%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGH-KEWMTEVN 139
+ K + + IG G +G++ + D + VAVK+L R Q H K E+
Sbjct: 19 TVLKRYQQLKPIGSGA-----QGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV 73
Query: 140 FLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQYLSPKSETILTWAM 194
L V H+N++ L+ E LV E M + L + + L + M
Sbjct: 74 LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQM 133
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
G+ +LH II RD K SNI++ K+ DFGLAR S F +
Sbjct: 134 LC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-STNF--M 179
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
T V T Y APE + D+WS G + EL+ G
Sbjct: 180 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 11 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 62
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLA 207
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 63 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 208 Y-----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 172
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 222
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 223 --FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 131 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV---DQYLS--PK 185
+ ++ E+ + ++++ + G + DE I +YEYM N S+ D+Y K
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYI----IYEYMENDSILKFDEYFFVLDK 142
Query: 186 SETILTWAMRLK-IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR 244
+ T +K I + +Y+H + I RD K SNIL+D+ KLSDFG
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFG--- 197
Query: 245 LGPSEGFTHVSTAVVGTMG---YAAPEYV--QTGRLAARSDVWSYGVFLYELITGRRPI 298
E V + G+ G + PE+ ++ A+ D+WS G+ LY + P
Sbjct: 198 ----ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGRR-G 127
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 128 VQGH-KEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 181
Q H K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 295
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 296 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGRR-G 127
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 128 VQGH-KEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 181
Q H K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 182 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 241
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 242 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 295
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 296 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 200 QDAARGLAYLHEGMDFQIIVRDFKSSNILLD--EQWNAKLSDFGLARLGPSEGFTHVSTA 257
Q G++Y H QI RD K N LLD K+ DFG ++ S +
Sbjct: 123 QQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKS 176
Query: 258 VVGTMGYAAPEYV----QTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQW 312
VGT Y APE + G++A DVWS GV LY ++ G P D PR +K +Q
Sbjct: 177 TVGTPAYIAPEVLLRQEYDGKIA---DVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR 233
Query: 313 VKPYLSDAKQFRQIVDPRLEGKYS----LRLVSKLSHVANLCLVKNARTRPKMSEV 364
+ L KYS +R+ + H+ + V + TR + E+
Sbjct: 234 I-----------------LSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEI 272
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 11 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 62
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLA 207
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 63 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 208 Y-----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 172
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQ 220
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ S+ H+ CL RP E+
Sbjct: 221 VFFRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G G VY+ K ++ P ++V K + ++ V+ TE+ L + H N++KL
Sbjct: 61 LGRGATSIVYRCKQKGTQKP-YALKVLKKTVDKKIVR------TEIGVLLRLSHPNIIKL 113
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR----GLAY 208
+ E + LV E + G + + K + A DA + +AY
Sbjct: 114 ----KEIFETPTEISLVLELVTGGELFDRIVEKG------YYSERDAADAVKQILEAVAY 163
Query: 209 LHEGMDFQIIVRDFKSSNILLDE---QWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 265
LHE I+ RD K N+L K++DFGL+++ + V GT GY
Sbjct: 164 LHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK---TVCGTPGYC 217
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 302
APE ++ D+WS G+ Y L+ G P R
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 22/245 (8%)
Query: 60 PSYPSMS--QRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVE 117
P SM+ Q+ EF + + N+ +G+G F V + + K +
Sbjct: 2 PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61
Query: 118 VAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGS 177
+ K+L R Q + E ++H N+V+L D + LV++ + G
Sbjct: 62 INTKKLSARDFQ---KLEREARICRKLQHPNIVRL----HDSIQEESFHYLVFDLVTGGE 114
Query: 178 VDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-- 235
+ + + + + A Q +AY H I+ R+ K N+LL +
Sbjct: 115 LFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 169
Query: 236 -KLSDFGLA-RLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
KL+DFGLA + SE + GT GY +PE ++ + D+W+ GV LY L+
Sbjct: 170 VKLADFGLAIEVNDSEAWH----GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 225
Query: 294 GRRPI 298
G P
Sbjct: 226 GYPPF 230
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 111/273 (40%), Gaps = 42/273 (15%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGH-KEWMTEVN 139
+ K + IG G +G++ + D VA+K+L R Q H K E+
Sbjct: 15 TVLKRYQNLKPIGSGA-----QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 69
Query: 140 FLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQYLSPKSETILTWAM 194
+ V H+N++ L+ E LV E M + L + + L + M
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
G+ +LH II RD K SNI++ K+ DFGLAR + G + +
Sbjct: 130 LC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFM 175
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGRRPIDR-NR----- 302
T V T Y APE + D+WS G + E++ GR ID+ N+
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
Query: 303 ----PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
P +KL V+ Y+ + ++ + P+L
Sbjct: 236 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 268
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 111/273 (40%), Gaps = 42/273 (15%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGH-KEWMTEVN 139
+ K + IG G +G++ + D VA+K+L R Q H K E+
Sbjct: 14 TVLKRYQNLKPIGSGA-----QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 68
Query: 140 FLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQYLSPKSETILTWAM 194
+ V H+N++ L+ E LV E M + L + + L + M
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 128
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
G+ +LH II RD K SNI++ K+ DFGLAR + G + +
Sbjct: 129 LC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFM 174
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGRRPIDR-NR----- 302
T V T Y APE + D+WS G + E++ GR ID+ N+
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
Query: 303 ----PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 331
P +KL V+ Y+ + ++ + P+L
Sbjct: 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 267
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 42/262 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGH-KEWMTEVNFLGIVEHQNLV 150
IG G +G++ + D VA+K+L R Q H K E+ + V H+N++
Sbjct: 26 IGSGA-----QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 151 KLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQYLSPKSETILTWAMRLKIAQDAARG 205
L+ E LV E M + L + + L + M G
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--------G 132
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 265
+ +LH II RD K SNI++ K+ DFGLAR + G + + T V T Y
Sbjct: 133 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELI------TGRRPIDR-NR---------PRSEQKL 309
APE + D+WS G + E++ GR ID+ N+ P +KL
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 310 LQWVKPYLSDAKQFRQIVDPRL 331
V+ Y+ + ++ + P+L
Sbjct: 247 QPTVRNYVENRPKYAGLTFPKL 268
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAVVG 260
RGL Y+H Q+I RD K SN+L++E K+ DFG+AR P+E + T V
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE-HQYFMTEYVA 225
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRR 296
T Y APE + + ++ D+WS G E++ R+
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 4 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 58
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 59 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 118
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 119 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 167
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 294
K+ DFGLAR + G + + V T Y APE + D+WS G + E+I G
Sbjct: 168 KILDFGLAR---TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 22/220 (10%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEW---MTEVNFLGI 143
F R +G G FG V L+K+ E + A+K L ++ V K+ + E L
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
V LVKL D+ +V EY+ G + +L A R AQ
Sbjct: 98 VNFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQ-IV 151
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 263
YLH +I RD K N+L+D+Q +++DFG A+ + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPE 203
Query: 264 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 303
APE + + D W+ GV +YE+ G P ++P
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAVVG 260
RGL Y+H Q+I RD K SN+L++E K+ DFG+AR P+E + T V
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE-HQYFMTEYVA 224
Query: 261 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRR 296
T Y APE + + ++ D+WS G E++ R+
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 106/259 (40%), Gaps = 36/259 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGH-KEWMTEVNFLGIVEHQNLV 150
IG G +G++ + D VA+K+L R Q H K E+ + V H+N++
Sbjct: 25 IGSGA-----QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 151 KLVGYCADDD--ERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
L+ E LV E M D L + L + G+ +
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYLLYQMLXGIKH 134
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE 268
LH II RD K SNI++ K+ DFGLAR + G + + T V T Y APE
Sbjct: 135 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 188
Query: 269 YVQTGRLAARSDVWSYGVFLYELI------TGRRPIDR-NR---------PRSEQKLLQW 312
+ D+WS G + E++ GR ID+ N+ P +KL
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248
Query: 313 VKPYLSDAKQFRQIVDPRL 331
V+ Y+ + ++ + P+L
Sbjct: 249 VRNYVENRPKYAGLTFPKL 267
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 30 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 81
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 82 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 191
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 241
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ + H+ CL RP E+
Sbjct: 242 --FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 53/286 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM------TEVNFLGIVE 145
++G+GGFG V+ G + +++VA+K + R V G EV L V
Sbjct: 38 LLGKGGFGTVFAG-----HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 146 ----HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
H +++L+ + + + G L++ +P + Y++ K + R Q
Sbjct: 93 AGGGHPGVIRLLDWF--ETQEGFM-LVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQV 148
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVG 260
A + + H ++ RD K NIL+D + AKL DFG L E +T G
Sbjct: 149 VA-AIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD----G 200
Query: 261 TMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSD 319
T Y+ PE++ + A + VWS G+ LY+++ G P +R++ E +L
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL---------- 250
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
F V P + CL +RP + E+L
Sbjct: 251 --HFPAHVSP------------DCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 31 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 82
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 83 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 192
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 242
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ + H+ CL RP E+
Sbjct: 243 --FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 27/209 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IGEG +G V+K + D Q V + K + E+ L ++H NLV L
Sbjct: 11 IGEGSYGVVFKC---RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 153 VGYCADDDERGIQRL-LVYEYMPN---GSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 208
+ + R +RL LV+EY + +D+Y E ++ I + + +
Sbjct: 68 L-----EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-----SITWQTLQAVNF 117
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL--GPSEGFTHVSTAVVGTMGYAA 266
H+ I RD K NIL+ + KL DFG ARL GPS+ + V T Y +
Sbjct: 118 CHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY----DDEVATRWYRS 170
Query: 267 PE-YVQTGRLAARSDVWSYGVFLYELITG 294
PE V + DVW+ G EL++G
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 31 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 82
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 83 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 192
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 242
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ + H+ CL RP E+
Sbjct: 243 --FRQ------------RVSXECQHLIRWCLALRPXDRPTFEEI 272
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 58 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 109
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 110 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 219
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 269
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ + H+ CL RP E+
Sbjct: 270 --FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 44 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 95
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 96 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 205
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQ 253
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ + H+ CL RP E+
Sbjct: 254 VFFRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 63 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 114
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 115 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 168
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 169 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 224
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 225 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 274
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ + H+ CL RP E+
Sbjct: 275 --FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 44 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 95
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 96 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 205
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQ 253
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ + H+ CL RP E+
Sbjct: 254 VFFRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 43 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 94
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG-- 205
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 95 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 206 ---LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 204
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQ 252
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ + H+ CL RP E+
Sbjct: 253 VFFRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 7 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 61
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 62 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 121
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 122 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 170
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-- 293
K+ DFGLAR + G + + T V T Y APE + D+WS G + E++
Sbjct: 171 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
Query: 294 ----GRRPIDR 300
GR ID+
Sbjct: 228 ILFPGRDYIDQ 238
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 11 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 62
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLA 207
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 63 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 208 Y-----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 117 WQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 172
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 222
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ + H+ CL RP E+
Sbjct: 223 --FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
++G GGFG VY G+ S + VA+K + + + +W N + L+K
Sbjct: 38 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRI---SDWGELPNGTRVPMEVVLLK 89
Query: 152 LV--GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLA 207
V G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 90 KVSSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 208 Y-----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 261
+ + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GT 199
Query: 262 MGYAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDA 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 200 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------- 249
Query: 321 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
FRQ R+ + H+ CL RP E+
Sbjct: 250 --FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 23/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG G +G V + K + ++ A K++ + V+ + E+ + ++H N+++L
Sbjct: 17 IGRGSWGEVKIAVQKGT-----RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 71
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
Y +D I LV E G + + + K + + +I +D +AY H+
Sbjct: 72 --YETFEDNTDI--YLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHK- 124
Query: 213 MDFQIIVRDFKSSNILL---DEQWNAKLSDFGL-ARLGPSEGFTHVSTAVVGTMGYAAPE 268
+ RD K N L KL DFGL AR P + + VGT Y +P+
Sbjct: 125 --LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK----MMRTKVGTPYYVSPQ 178
Query: 269 YVQTGRLAARSDVWSYGVFLYELITGRRPI 298
++ G D WS GV +Y L+ G P
Sbjct: 179 VLE-GLYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 20/219 (9%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGI 143
+ N+ +G+G F V + + K + + K+L R Q + E
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
++H N+V+L D + LV++ + G + + + + + A Q
Sbjct: 62 LQHPNIVRL----HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQIL 115
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVV 259
+AY H I+ R+ K N+LL + KL+DFGLA + SE +
Sbjct: 116 ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFA 168
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
GT GY +PE ++ + D+W+ GV LY L+ G P
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 23/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
IG G +G V + K + ++ A K++ + V+ + E+ + ++H N+++L
Sbjct: 34 IGRGSWGEVKIAVQKGT-----RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 88
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
Y +D I LV E G + + + K + + +I +D +AY H+
Sbjct: 89 --YETFEDNTDI--YLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHK- 141
Query: 213 MDFQIIVRDFKSSNILL---DEQWNAKLSDFGL-ARLGPSEGFTHVSTAVVGTMGYAAPE 268
+ RD K N L KL DFGL AR P + + VGT Y +P+
Sbjct: 142 --LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK----MMRTKVGTPYYVSPQ 195
Query: 269 YVQTGRLAARSDVWSYGVFLYELITGRRPI 298
++ G D WS GV +Y L+ G P
Sbjct: 196 VLE-GLYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 20/219 (9%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGI 143
+ N+ +G+G F V + + K + + K+L R Q + E
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 60
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
++H N+V+L D + LV++ + G + + + + + A Q
Sbjct: 61 LQHPNIVRL----HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQIL 114
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVV 259
+AY H I+ R+ K N+LL + KL+DFGLA + SE +
Sbjct: 115 ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFA 167
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 298
GT GY +PE ++ + D+W+ GV LY L+ G P
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
S T + +G+G F V + + I ++ + K+ + K+L R H++ E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKI-INTKKLSARD---HQKLEREARI 56
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+++H N+V+L + E G LV++ + G + E I+ A
Sbjct: 57 CRLLKHPNIVRLHDSIS---EEGFH-YLVFDLVTGGEL-------FEDIV--AREYYSEA 103
Query: 201 DAARGLAYLHEGMDF----QIIVRDFKSSNILLDEQWNA---KLSDFGLARLGPSEGFTH 253
DA+ + + E ++ I+ RD K N+LL + KL+DFGLA +G
Sbjct: 104 DASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQ 161
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKL 309
GT GY +PE ++ D+W+ GV LY L+ G P D ++ R Q++
Sbjct: 162 AWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 21/226 (9%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGI 143
+ N+ +G+G F V + + K + + K+L R Q + E
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 144 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 203
++H N+V+L D + LV++ + G + + + + + A Q
Sbjct: 62 LQHPNIVRL----HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQIL 115
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVV 259
+AY H I+ R+ K N+LL + KL+DFGLA + SE +
Sbjct: 116 ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFA 168
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPR 304
GT GY +PE ++ + D+W+ GV LY L+ G P D ++ R
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 214
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
S T + +G+G F V + + I ++ + K+ + K+L R H++ E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKI-INTKKLSARD---HQKLEREARI 56
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+++H N+V+L + E G LV++ + G + E I+ A
Sbjct: 57 CRLLKHPNIVRLHDSIS---EEGFH-YLVFDLVTGGEL-------FEDIV--AREYYSEA 103
Query: 201 DAARGLAYLHEGMDF----QIIVRDFKSSNILLDEQWNA---KLSDFGLARLGPSEGFTH 253
DA+ + + E ++ I+ RD K N+LL + KL+DFGLA +G
Sbjct: 104 DASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQ 161
Query: 254 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKL 309
GT GY +PE ++ D+W+ GV LY L+ G P D ++ R Q++
Sbjct: 162 AWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI 218
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 54/240 (22%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVE 145
+F V+G+G FG V K +N+ D A+K++ R + ++EV L +
Sbjct: 7 DFEEIAVLGQGAFGQVVKA--RNALDSRY---YAIKKI-RHTEEKLSTILSEVXLLASLN 60
Query: 146 HQNLVKLVGYCADDDERGIQR-----------LLVYEYMPNGSVDQYLSPKSETILT--- 191
HQ +V+ Y A + R + + EY N ++ Y SE +
Sbjct: 61 HQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL--YDLIHSENLNQQRD 116
Query: 192 --WAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR----- 244
W + +I + L+Y+H II R+ K NI +DE N K+ DFGLA+
Sbjct: 117 EYWRLFRQILE----ALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 245 -----------LGPSEGFTHVSTAVVGTMGYAAPEYVQ-TGRLAARSDVWSYGVFLYELI 292
G S+ T+ +GT Y A E + TG + D +S G+ +E I
Sbjct: 170 LDILKLDSQNLPGSSDNL----TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 20/222 (9%)
Query: 93 IGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
+G+G F V + + + ++ + K+ + K+L R H++ E +++H N+V+
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKI-INTKKLSARD---HQKLEREARICRLLKHPNIVR 85
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 211
L +++ L+++ + G + + + + + A Q + + H+
Sbjct: 86 LHDSISEEG----HHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQ 139
Query: 212 GMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE 268
++ RD K N+LL + KL+DFGLA EG GT GY +PE
Sbjct: 140 ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPE 194
Query: 269 YVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKL 309
++ D+W+ GV LY L+ G P D ++ R Q++
Sbjct: 195 VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI 236
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 32/232 (13%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-GVQGH-KEWMTEVN 139
+ K + IG G +G++ + D + VA+K+L R Q H K E+
Sbjct: 15 TVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELV 69
Query: 140 FLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQY----LSPKSETILTWAM 194
+ V H+N++ L+ + Q + + + + ++ Q L + + L + M
Sbjct: 70 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
G+ +LH II RD K SNI++ K+ DFGLAR + G + +
Sbjct: 130 LC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFM 175
Query: 255 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT------GRRPIDR 300
T V T Y APE + D+WS G + E++ GR ID+
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 227
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 18/220 (8%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLGIVE 145
+ + IG+G FG V+K + + QKV + K L +G + E+ L +++
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKT---GQKVALK-KVLMENEKEGFPITALREIKILQLLK 75
Query: 146 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETIL---TWAMRLKIAQDA 202
H+N+V L+ C R Y+ + L+ +L T + ++ Q
Sbjct: 76 HENVVNLIEICRTK-ASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAVV 259
GL Y+H +I+ RD K++N+L+ KL+DFGLAR L + VV
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 260 GTMGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPI 298
T+ Y PE + R D+W G + E+ T R PI
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLGIVE 145
+ + IG+G FG V+K + + QKV + K L +G + E+ L +++
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKT---GQKVALK-KVLMENEKEGFPITALREIKILQLLK 75
Query: 146 HQNLVKLVGYC---ADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
H+N+V L+ C A R + LV+++ + L T + ++ Q
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTLSEIKRVMQM 133
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAV 258
GL Y+H +I+ RD K++N+L+ KL+DFGLAR L + V
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 259 VGTMGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPI 298
V T+ Y PE + R D+W G + E+ T R PI
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 189
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 117
Query: 190 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 246
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 118 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166
Query: 247 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 302
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 167 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 189
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 190 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 246
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 119 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 247 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 302
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 189
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 190 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 246
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 119 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 247 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 302
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 22/237 (9%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNF 140
S T + IG+G F V + + + + + K+ + K+L R H++ E
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKI-INTKKLSARD---HQKLEREARI 56
Query: 141 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 200
+++H N+V+L + E G LV++ + G + + + + + A Q
Sbjct: 57 CRLLKHSNIVRLHDSIS---EEGFH-YLVFDLVTGGELFEDIVARE--YYSEADASHCIQ 110
Query: 201 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLARLGPSEGFTHVSTA 257
+ + H+ ++ RD K N+LL + KL+DFGLA +G
Sbjct: 111 QILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGDQQAWFG 165
Query: 258 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 314
GT GY +PE ++ D+W+ GV LY L+ G P + KL Q +K
Sbjct: 166 FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF---WDEDQHKLYQQIK 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 189
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 124
Query: 190 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 246
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 125 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 172
Query: 247 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 302
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 173 --LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 189
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 190 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 246
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 119 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 247 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 302
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 33/251 (13%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-- 293
K+ DFGLAR + G + + V T Y APE + D+WS G + E++
Sbjct: 166 KILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
Query: 294 ----GRRPIDR 300
GR ID+
Sbjct: 223 ILFPGRDYIDQ 233
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 28/223 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+GEGGF Y L++ D A+K++ Q +E E + + H N+++L
Sbjct: 37 LGEGGFS--YVDLVEGLHDGH---FYALKRILCHEQQDREEAQREADMHRLFNHPNILRL 91
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSE--TILTWAMRLKIAQDAARGLAYLH 210
V YC + + L+ + G++ + + LT L + RGL +H
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS-----------TAVV 259
RD K +NILL ++ L D G ++ HV A
Sbjct: 152 AK---GYAHRDLKPTNILLGDEGQPVLMDLG----SMNQACIHVEGSRQALTLQDWAAQR 204
Query: 260 GTMGYAAPEYVQTGR---LAARSDVWSYGVFLYELITGRRPID 299
T+ Y APE + R+DVWS G LY ++ G P D
Sbjct: 205 CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM--TEVNFLGIVEHQNLV 150
IG+G +G V+ G + + VAVK W TE+ ++ H+N++
Sbjct: 45 IGKGRYGEVWMGKWRGEK-------VAVKVFF---TTEEASWFRETEIYQTVLMRHENIL 94
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+ Q L+ +Y NGS+ YL KS T+ +M LK+A + GL +LH
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSM-LKLAYSSVSGLCHLH 151
Query: 211 -EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLAR--LGPSEGFTHVSTAVVGTMG 263
E Q I RD KS NIL+ + ++D GLA + + VGT
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKR 211
Query: 264 YAAPEYVQTG------RLAARSDVWSYGVFLYEL 291
Y PE + + +D++S+G+ L+E+
Sbjct: 212 YMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLGIVE 145
+ + IG+G FG V+K + + QKV + K L +G + E+ L +++
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKT---GQKVALK-KVLMENEKEGFPITALREIKILQLLK 74
Query: 146 HQNLVKLVGYC---ADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
H+N+V L+ C A R + LV+++ + L T + ++ Q
Sbjct: 75 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTLSEIKRVMQM 132
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAV 258
GL Y+H +I+ RD K++N+L+ KL+DFGLAR L + V
Sbjct: 133 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 259 VGTMGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPI 298
V T+ Y PE + R D+W G + E+ T R PI
Sbjct: 190 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 30/150 (20%)
Query: 217 IIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRL 275
++ RD K NIL+D + KL DFG L +T GT Y+ PE+++ R
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIRYHRY 233
Query: 276 AARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGK 334
RS VWS G+ LY+++ G P + + ++ FRQ
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------FRQ--------- 272
Query: 335 YSLRLVSKLSHVANLCLVKNARTRPKMSEV 364
R+ S+ H+ CL RP E+
Sbjct: 273 ---RVSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 20/230 (8%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHK-EWMTEVNFLGIVE 145
+ + IG+G FG V+K + + QKV + K L +G + E+ L +++
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKT---GQKVALK-KVLMENEKEGFPITALREIKILQLLK 75
Query: 146 HQNLVKLVGYC---ADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 201
H+N+V L+ C A R + LV+++ + L T + ++ Q
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTLSEIKRVMQM 133
Query: 202 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAV 258
GL Y+H +I+ RD K++N+L+ KL+DFGLAR L + V
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 259 VGTMGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 307
V T+ Y PE + R D+W G + E+ T R PI + Q
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVKL 152
+G+G F V + + + + + K+L R H++ E +++H N+V+L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARD---HQKLEREARICRLLKHPNIVRL 75
Query: 153 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 212
+++ L+++ + G + + + + + A Q + + H+
Sbjct: 76 HDSISEEG----HHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQ- 128
Query: 213 MDFQIIVRDFKSSNILLDEQWNA---KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 269
++ R+ K N+LL + KL+DFGLA EG GT GY +PE
Sbjct: 129 --MGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEV 184
Query: 270 VQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKL 309
++ D+W+ GV LY L+ G P D ++ R Q++
Sbjct: 185 LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI 225
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 33/251 (13%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGRR-GVQGH-KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 179
L R Q H K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 180 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 235
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 236 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-- 293
K+ DFGLAR + G + + V T Y APE + D+WS G + E++
Sbjct: 166 KILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
Query: 294 ----GRRPIDR 300
GR ID+
Sbjct: 223 ILFPGRDYIDQ 233
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 189
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 243
Query: 190 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 246
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 244 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 291
Query: 247 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 302
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 292 --LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 97/239 (40%), Gaps = 52/239 (21%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPS----QKVEVAVKQLGRRGVQGHKEWMTEVNFL 141
+F +G GGFG V++ KN D +++ + ++L R V M EV L
Sbjct: 6 DFEPIQCLGRGGFGVVFEA--KNKVDDCNYAIKRIRLPNRELAREKV------MREVKAL 57
Query: 142 GIVEHQNLVKLVGYCADDDERGIQRLL-----VYEYMPNGSVDQYLSPKSETILTW---- 192
+EH +V+ + A ++ ++L VY Y+ Q + E + W
Sbjct: 58 AKLEHPGIVRY--FNAWLEKNTTEKLQPSSPKVYLYI------QMQLCRKENLKDWMNGR 109
Query: 193 --------AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR 244
++ L I A + +LH ++ RD K SNI K+ DFGL
Sbjct: 110 CTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVT 166
Query: 245 -----------LGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI 292
L P + T VGT Y +PE + + + D++S G+ L+EL+
Sbjct: 167 AMDQDEEEQTVLTPMPAYAR-HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 136 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 189
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 257
Query: 190 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 246
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 258 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 305
Query: 247 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 302
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 306 --LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 220 RDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS 279
RD K NIL+ A L DFG+A E T + VGT+ Y APE R+
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN-TVGTLYYXAPERFSESHATYRA 216
Query: 280 DVWSYGVFLYELITGRRP 297
D+++ LYE +TG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 23/239 (9%)
Query: 80 LKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVN 139
+ + + R +G G +G V L K+ +++ +K+ + EV
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVA 73
Query: 140 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWAMRLKI 198
L ++H N++KL Y +D+R LV E G + D+ + + + + A+ I
Sbjct: 74 VLKQLDHPNIMKL--YEFFEDKRNY--YLVMEVYRGGELFDEIILRQKFSEVDAAV---I 126
Query: 199 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGLARLGPSEGFTHVS 255
+ G YLH+ I+ RD K N+LL+ + K+ DFGL+ G
Sbjct: 127 MKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--- 180
Query: 256 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 314
+GT Y APE ++ + + DVWS GV LY L+ G P +++Q++L+ V+
Sbjct: 181 KERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFG---GQTDQEILKRVE 235
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 16/226 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
VIG+G F V + + + + V V + ++ E + +++H ++V+
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSET--ILTWAMRLKIAQDAARGLAYL 209
L+ + D +V+E+M + + +++ + + A+ + L Y
Sbjct: 93 LLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVVGTMGYA 265
H D II RD K +LL + N+ KL FG+A +LG S V+ VGT +
Sbjct: 149 H---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES---GLVAGGRVGTPHFM 202
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 311
APE V+ DVW GV L+ L++G P + R + +++
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 248
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 16/226 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQNLVK 151
VIG+G F V + + + + V V + ++ E + +++H ++V+
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 152 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSET--ILTWAMRLKIAQDAARGLAYL 209
L+ + D +V+E+M + + +++ + + A+ + L Y
Sbjct: 91 LLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVVGTMGYA 265
H D II RD K +LL + N+ KL FG+A +LG S V+ VGT +
Sbjct: 147 H---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES---GLVAGGRVGTPHFM 200
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 311
APE V+ DVW GV L+ L++G P + R + +++
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 197
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 198 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 253
Query: 283 SYGVFLYELITGRRPIDRNR 302
S GV +Y L+ G P N
Sbjct: 254 SLGVIMYILLCGYPPFYSNH 273
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 23/232 (9%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEH 146
+ R +G G +G V L K+ +++ +K+ + EV L ++H
Sbjct: 6 YQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 147 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWAMRLKIAQDAARG 205
N++KL + +D+R LV E G + D+ + + + + A+ I + G
Sbjct: 64 PNIMKLYEFF--EDKRNY--YLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSG 116
Query: 206 LAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGLARLGPSEGFTHVSTAVVGTM 262
YLH+ I+ RD K N+LL+ + K+ DFGL+ G +GT
Sbjct: 117 TTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGTA 170
Query: 263 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 314
Y APE ++ + + DVWS GV LY L+ G P +++Q++L+ V+
Sbjct: 171 YYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFG---GQTDQEILKRVE 218
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 211 EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYA 265
+GM+F + I RD + NILL E+ K+ DFGLAR + + A + + +
Sbjct: 204 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWM 262
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPYLSD 319
APE + +SDVWS+GV L+E+ + G P ID R ++ + P +
Sbjct: 263 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT 322
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASAE 377
+ ++ ++D C RP SE++E + ++ A+A+
Sbjct: 323 PEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANAQ 359
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 211 EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYA 265
+GM+F + I RD + NILL E+ K+ DFGLAR + + A + + +
Sbjct: 211 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWM 269
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPYLSD 319
APE + +SDVWS+GV L+E+ + G P ID R ++ + P +
Sbjct: 270 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT 329
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASAE 377
+ ++ ++D C RP SE++E + ++ A+A+
Sbjct: 330 PEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANAQ 366
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 40/244 (16%)
Query: 64 SMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL 123
+ +Q P ++ + A ++ + R +GEG +G VYK + D VA+K++
Sbjct: 14 AQTQGPGSMS-VSAAPSATSIDRYRRITKLGEGTYGEVYKAI-----DTVTNETVAIKRI 67
Query: 124 ----GRRGVQGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRL-LVYEYMPNGSV 178
GV G + EV+ L ++H+N+++L + RL L++EY N +
Sbjct: 68 RLEHEEEGVPGTA--IREVSLLKELQHRNIIELKSVIHHN-----HRLHLIFEYAEN-DL 119
Query: 179 DQYLSPKSETILTWAMRL--KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL-----DE 231
+Y+ + +MR+ G+ + H + + RD K N+LL E
Sbjct: 120 KKYMDKNPDV----SMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASE 172
Query: 232 QWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFL 288
K+ DFGLAR G P FTH + T+ Y PE + R + S D+WS
Sbjct: 173 TPVLKIGDFGLARAFGIPIRQFTH----EIITLWYRPPEILLGSRHYSTSVDIWSIACIW 228
Query: 289 YELI 292
E++
Sbjct: 229 AEML 232
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 203
Query: 283 SYGVFLYELITGRRPIDRN 301
S GV +Y L+ G P N
Sbjct: 204 SLGVIMYILLCGYPPFYSN 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 153
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 154 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 209
Query: 283 SYGVFLYELITGRRPIDRNR 302
S GV +Y L+ G P N
Sbjct: 210 SLGVIMYILLCGYPPFYSNH 229
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 191
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 247
Query: 283 SYGVFLYELITGRRPIDRN 301
S GV +Y L+ G P N
Sbjct: 248 SLGVIMYILLCGYPPFYSN 266
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 151
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 152 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 207
Query: 283 SYGVFLYELITGRRPIDRNR 302
S GV +Y L+ G P N
Sbjct: 208 SLGVIMYILLCGYPPFYSNH 227
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 211 EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYA 265
+GM+F + I RD + NILL E+ K+ DFGLAR + + A + + +
Sbjct: 209 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWM 267
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPYLSD 319
APE + +SDVWS+GV L+E+ + G P ID R ++ + P +
Sbjct: 268 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT 327
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASAE 377
+ ++ ++D C RP SE++E + ++ A+A+
Sbjct: 328 PEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANAQ 364
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 145
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 283 SYGVFLYELITGRRPIDRNR 302
S GV +Y L+ G P N
Sbjct: 202 SLGVIMYILLCGYPPFYSNH 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 152
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 153 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 208
Query: 283 SYGVFLYELITGRRPIDRNR 302
S GV +Y L+ G P N
Sbjct: 209 SLGVIMYILLCGYPPFYSNH 228
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 203
Query: 283 SYGVFLYELITGRRPIDRNR 302
S GV +Y L+ G P N
Sbjct: 204 SLGVIMYILLCGYPPFYSNH 223
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGVQGHKEWMTEVNFLGIVEHQNL 149
+IG G +G V + D +K VA+K++ R + K + E+ L + H ++
Sbjct: 60 LIGTGSYGHVCEAY-----DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 150 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 209
VK++ D L V + + + ++ LT + + G+ Y+
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDFKKLF--RTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 210 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-------------LGPSEG------ 250
H I+ RD K +N L+++ + K+ DFGLAR + P E
Sbjct: 173 HSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT 229
Query: 251 FTHVS------TAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELIT 293
F H T V T Y APE + + DVWS G EL+
Sbjct: 230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 161
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 162 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 217
Query: 283 SYGVFLYELITGRRPIDRNR 302
S GV +Y L+ G P N
Sbjct: 218 SLGVIMYILLCGYPPFYSNH 237
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 146
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 147 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 202
Query: 283 SYGVFLYELITGRRPIDRNR 302
S GV +Y L+ G P N
Sbjct: 203 SLGVIMYILLCGYPPFYSNH 222
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 203 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGT 261
ARG+ +L + I RD + NILL E K+ DFGLAR + + + +
Sbjct: 209 ARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL-P 264
Query: 262 MGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 293
+ + APE + + +SDVWSYGV L+E+ +
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 33/177 (18%)
Query: 211 EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYA 265
+GM+F + I RD + NILL E+ K+ DFGLAR + + A + + +
Sbjct: 202 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWM 260
Query: 266 APEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPYLSD 319
APE + +SDVWS+GV L+E+ + G P ID R ++ + P +
Sbjct: 261 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT 320
Query: 320 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 376
+ ++ ++D C RP SE++E + ++ A+A
Sbjct: 321 PEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANA 356
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 145
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 283 SYGVFLYELITGRRPIDRNR 302
S GV +Y L+ G P N
Sbjct: 202 SLGVIMYILLCGYPPFYSNH 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 204 RGLAYLHEGMDFQIIVRDFKSSNIL-LDEQWNA---KLSDFGLARLGPSEGFTHVSTAVV 259
+ + YLH ++ RD K SNIL +DE N ++ DFG A+ +E ++
Sbjct: 127 KTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY- 182
Query: 260 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 310
T + APE ++ A D+WS GV LY ++TG P + +++L
Sbjct: 183 -TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 124/281 (44%), Gaps = 43/281 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVA--VKQLGRRGVQGHKEWMTEVNFLGIVEHQNLV 150
+G G FG V++ + E S+K +A VK G V KE ++ L I H+N++
Sbjct: 13 LGRGEFGIVHRCV----ETSSKKTYMAKFVKVKGTDQVLVKKE----ISILNIARHRNIL 64
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
L + E + ++++E++ + + ++ S L + L +LH
Sbjct: 65 HL----HESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLH 119
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNA--KLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAP 267
I D + NI+ + ++ K+ +FG AR L P + F + TA Y AP
Sbjct: 120 ---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP----EYYAP 172
Query: 268 EYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV--KPYLSDAKQFRQ 325
E Q ++ +D+WS G +Y L++G P + Q++++ + Y D + F++
Sbjct: 173 EVHQHDVVSTATDMWSLGTLVYVLLSGINPF---LAETNQQIIENIMNAEYTFDEEAFKE 229
Query: 326 IVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 366
I ++ V +L LVK ++R SE L+
Sbjct: 230 I------SIEAMDFVDRL-------LVKERKSRMTASEALQ 257
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 200 QDAARGLAYLHEGMDFQIIVRDFKSSNILLD--EQWNAKLSDFGLARLGPSEGFTHVSTA 257
Q G++Y H Q+ RD K N LLD K+ DFG ++ S +
Sbjct: 122 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKS 175
Query: 258 VVGTMGYAAPEYVQTGRLAAR-SDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQWV 313
VGT Y APE + + +DVWS GV LY ++ G P D P++ +K + +
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 200 QDAARGLAYLHEGMDFQIIVRDFKSSNILLD--EQWNAKLSDFGLARLGPSEGFTHVSTA 257
Q G++Y H Q+ RD K N LLD K+ DFG ++ S +
Sbjct: 121 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKS 174
Query: 258 VVGTMGYAAPEYVQTGRLAAR-SDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQWV 313
VGT Y APE + + +DVWS GV LY ++ G P D P++ +K + +
Sbjct: 175 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 232
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 118/288 (40%), Gaps = 47/288 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQN--LV 150
IG GG V++ L + Q + L Q + E+ +L ++ + ++
Sbjct: 64 IGSGGSSKVFQVL----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY 208
+L Y D +Y M G++D +L K ++I W R ++ +
Sbjct: 120 RLYDYEITDQ-------YIYMVMECGNIDLNSWLK-KKKSIDPWE-RKSYWKNMLEAVHT 170
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE 268
+H+ I+ D K +N L+ + KL DFG+A + + V + VGT+ Y PE
Sbjct: 171 IHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 269 YVQ-----------TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 317
++ +++ +SDVWS G LY + G+ P Q+++ +
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQI---- 274
Query: 318 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
+ I+DP E ++ L V CL ++ + R + E+L
Sbjct: 275 ---SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 168 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 227
LV+E M GS+ ++ + A + QD A L +LH + I RD K NI
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEAS--VVVQDVASALDFLH---NKGIAHRDLKPENI 142
Query: 228 LLDEQWNA---KLSDFGLARLGPSEG-FTHVST----AVVGTMGYAAPEYVQTGRLAA-- 277
L + K+ DFGL G + +ST G+ Y APE V+ A
Sbjct: 143 LCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 278 ---RSDVWSYGVFLYELITGRRPI 298
R D+WS GV LY L++G P
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 167 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 226
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH---SINIAHRDVKPEN 191
Query: 227 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 282
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D W
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXW 247
Query: 283 SYGVFLYELITGRRPIDRN 301
S GV Y L+ G P N
Sbjct: 248 SLGVIXYILLCGYPPFYSN 266
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 55/238 (23%)
Query: 93 IGEGGFG----CVYKG---------LIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVN 139
IG G + CV+K + K+ DPS+++E+ L R G
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI----LLRYG------------ 78
Query: 140 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPK--SETILTWAMRL 196
+H N++ L D + G LV E M G + D+ L K SE ++ +
Sbjct: 79 -----QHPNIITL----KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-- 127
Query: 197 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNIL-LDEQWNA---KLSDFGLARLGPSEGFT 252
+ + YLH ++ RD K SNIL +DE N ++ DFG A+ +E
Sbjct: 128 ---HTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 310
++ T + APE ++ D+WS G+ LY ++ G P + +++L
Sbjct: 182 LMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 118/288 (40%), Gaps = 47/288 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQN--LV 150
IG GG V++ L + Q + L Q + E+ +L ++ + ++
Sbjct: 64 IGSGGSSKVFQVL----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY 208
+L Y D +Y M G++D +L K ++I W R ++ +
Sbjct: 120 RLYDYEITDQ-------YIYMVMECGNIDLNSWLK-KKKSIDPWE-RKSYWKNMLEAVHT 170
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE 268
+H+ I+ D K +N L+ + KL DFG+A + + V + VGT+ Y PE
Sbjct: 171 IHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 269 YVQ-----------TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 317
++ +++ +SDVWS G LY + G+ P Q+++ +
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQI---- 274
Query: 318 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
+ I+DP E ++ L V CL ++ + R + E+L
Sbjct: 275 ---SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 55/238 (23%)
Query: 93 IGEGGFG----CVYKG---------LIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVN 139
IG G + CV+K + K+ DPS+++E+ L R G
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI----LLRYG------------ 78
Query: 140 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPK--SETILTWAMRL 196
+H N++ L D + G LV E M G + D+ L K SE ++ +
Sbjct: 79 -----QHPNIITL----KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-- 127
Query: 197 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNIL-LDEQWNA---KLSDFGLARLGPSEGFT 252
+ + YLH ++ RD K SNIL +DE N ++ DFG A+ +E
Sbjct: 128 ---HTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
Query: 253 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 310
++ T + APE ++ D+WS G+ LY ++ G P + +++L
Sbjct: 182 LMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 91/235 (38%), Gaps = 39/235 (16%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH----- 131
IAEL + ++ I G +G V G+ S+ + VA+K++ G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGV------DSEGIPVAIKRVFNTVSDGRTVNIL 67
Query: 132 ------KEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRL-LVYEYMPNGSV----DQ 180
K + E+ L H N++ L +E + +L LV E M DQ
Sbjct: 68 SDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ 127
Query: 181 --YLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLS 238
+SP+ + + L GL LHE ++ RD NILL + + +
Sbjct: 128 RIVISPQHIQYFMYHILL--------GLHVLHEA---GVVHRDLHPGNILLADNNDITIC 176
Query: 239 DFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV-QTGRLAARSDVWSYGVFLYELI 292
DF LAR ++ T V Y APE V Q D+WS G + E+
Sbjct: 177 DFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 100/244 (40%), Gaps = 31/244 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-VQGHKEWMTEVNFLGIVEHQNLVK 151
I GG G +Y L +N V +K L G + M E FL V H ++V+
Sbjct: 88 IAHGGLGWIYLALDRNV----NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQ 143
Query: 152 LVGYCADDDERGIQ-RLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 210
+ + D G +V EY+ S+ + K A L+I L+YLH
Sbjct: 144 IFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILP----ALSYLH 199
Query: 211 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 270
++ D K NI+L E+ KL D G S G+ + GT G+ APE V
Sbjct: 200 S---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLY------GTPGFQAPEIV 249
Query: 271 QTGRLAARSDVWSYGVFLYELITGRRPIDRNR-----PRSEQKLLQWVKPYLSDAKQFRQ 325
+TG A +D+++ G L L T P R P + L K Y S + R+
Sbjct: 250 RTGPTVA-TDIYTVGRTLAAL-TLDLPTRNGRYVDGLPEDDPVL----KTYDSYGRLLRR 303
Query: 326 IVDP 329
+DP
Sbjct: 304 AIDP 307
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 47/288 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQN--LV 150
IG GG V++ L + Q + L Q + E+ +L ++ + ++
Sbjct: 17 IGSGGSSKVFQVL----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 72
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY 208
+L Y D +Y M G++D +L K ++I W R ++ +
Sbjct: 73 RLYDYEITDQ-------YIYMVMECGNIDLNSWLK-KKKSIDPWE-RKSYWKNMLEAVHT 123
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE 268
+H+ I+ D K +N L+ + KL DFG+A + + V + VGT+ Y PE
Sbjct: 124 IHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
Query: 269 YVQ-----------TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 317
++ +++ +SDVWS G LY + G+ P + +
Sbjct: 180 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------II 224
Query: 318 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
+ + I+DP E ++ L V CL ++ + R + E+L
Sbjct: 225 NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 47/288 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQN--LV 150
IG GG V++ L + Q + L Q + E+ +L ++ + ++
Sbjct: 20 IGSGGSSKVFQVL----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 75
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY 208
+L Y D +Y M G++D +L K ++I W R ++ +
Sbjct: 76 RLYDYEITDQ-------YIYMVMECGNIDLNSWLK-KKKSIDPWE-RKSYWKNMLEAVHT 126
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE 268
+H+ I+ D K +N L+ + KL DFG+A + + V + VGT+ Y PE
Sbjct: 127 IHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
Query: 269 YVQ-----------TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 317
++ +++ +SDVWS G LY + G+ P + +
Sbjct: 183 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------II 227
Query: 318 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
+ + I+DP E ++ L V CL ++ + R + E+L
Sbjct: 228 NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWM-------- 135
++ +S +G G FG V+ + D + EV VK + + V W+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAV-----DKEKNKEVVVKFIKKEKVL-EDCWIEDPKLGKV 76
Query: 136 -TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAM 194
E+ L VEH N++K++ + +G +L++ ++ +D + L +
Sbjct: 77 TLEIAILSRVEHANIIKVLDIF---ENQGFFQLVMEKH--GSGLDLFAFIDRHPRLDEPL 131
Query: 195 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 254
I + + YL II RD K NI++ E + KL DFG A +
Sbjct: 132 ASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY- 187
Query: 255 STAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPI 298
GT+ Y APE + ++WS GV LY L+ P
Sbjct: 188 --TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 91/235 (38%), Gaps = 39/235 (16%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGH----- 131
IAEL + ++ I G +G V G+ S+ + VA+K++ G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGV------DSEGIPVAIKRVFNTVSDGRTVNIL 67
Query: 132 ------KEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRL-LVYEYMPNGSV----DQ 180
K + E+ L H N++ L +E + +L LV E M DQ
Sbjct: 68 SDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ 127
Query: 181 --YLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLS 238
+SP+ + + L GL LHE ++ RD NILL + + +
Sbjct: 128 RIVISPQHIQYFMYHILL--------GLHVLHEA---GVVHRDLHPGNILLADNNDITIC 176
Query: 239 DFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV-QTGRLAARSDVWSYGVFLYELI 292
DF LAR ++ T V Y APE V Q D+WS G + E+
Sbjct: 177 DFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 47/288 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGVQGHKEWMTEVNFLGIVEHQN--LV 150
IG GG V++ L + Q + L Q + E+ +L ++ + ++
Sbjct: 36 IGSGGSSKVFQVL----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 91
Query: 151 KLVGYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY 208
+L Y D +Y M G++D +L K ++I W R ++ +
Sbjct: 92 RLYDYEITDQ-------YIYMVMECGNIDLNSWLK-KKKSIDPWE-RKSYWKNMLEAVHT 142
Query: 209 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE 268
+H+ I+ D K +N L+ + KL DFG+A + + V + VGT+ Y PE
Sbjct: 143 IHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
Query: 269 YVQ-----------TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 317
++ +++ +SDVWS G LY + G+ P + +
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------II 243
Query: 318 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 365
+ + I+DP E ++ L V CL ++ + R + E+L
Sbjct: 244 NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,011,920
Number of Sequences: 62578
Number of extensions: 464547
Number of successful extensions: 3651
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 1244
Number of HSP's gapped (non-prelim): 1110
length of query: 428
length of database: 14,973,337
effective HSP length: 102
effective length of query: 326
effective length of database: 8,590,381
effective search space: 2800464206
effective search space used: 2800464206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)