Query 014247
Match_columns 428
No_of_seqs 510 out of 3817
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 08:08:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014247.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014247hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hc4_A Protein arginine N-meth 100.0 2.8E-60 9.6E-65 466.6 27.5 327 69-427 40-374 (376)
2 3q7e_A Protein arginine N-meth 100.0 2.6E-51 8.8E-56 403.4 30.1 318 73-428 27-349 (349)
3 1g6q_1 HnRNP arginine N-methyl 100.0 8E-51 2.7E-55 396.7 29.0 308 76-419 2-310 (328)
4 2fyt_A Protein arginine N-meth 100.0 9.8E-50 3.4E-54 390.6 32.1 315 70-421 22-337 (340)
5 3r0q_C Probable protein argini 100.0 7E-50 2.4E-54 396.9 31.0 320 73-420 24-362 (376)
6 2y1w_A Histone-arginine methyl 100.0 1.6E-45 5.4E-50 362.1 33.5 309 73-416 11-324 (348)
7 4gqb_A Protein arginine N-meth 100.0 3.4E-43 1.2E-47 363.4 25.9 282 85-414 322-619 (637)
8 3b3j_A Histone-arginine methyl 100.0 7.7E-42 2.6E-46 348.0 31.0 305 76-415 122-431 (480)
9 3ua3_A Protein arginine N-meth 100.0 3E-40 1E-44 339.1 21.6 293 84-415 376-714 (745)
10 3kkz_A Uncharacterized protein 99.8 5.1E-18 1.8E-22 159.7 16.7 161 99-268 32-197 (267)
11 1nkv_A Hypothetical protein YJ 99.8 1.1E-17 3.7E-22 156.2 16.3 161 99-267 23-187 (256)
12 3f4k_A Putative methyltransfer 99.8 1.2E-17 4.1E-22 156.0 15.9 159 101-268 34-197 (257)
13 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.3E-17 4.3E-22 156.7 15.5 107 110-218 68-178 (261)
14 3bus_A REBM, methyltransferase 99.7 1.6E-17 5.4E-22 156.7 15.4 166 98-269 47-218 (273)
15 3g5l_A Putative S-adenosylmeth 99.7 1.2E-17 4E-22 155.9 12.5 187 72-269 8-218 (253)
16 3vc1_A Geranyl diphosphate 2-C 99.7 3.7E-17 1.3E-21 157.6 15.4 160 102-270 106-272 (312)
17 2o57_A Putative sarcosine dime 99.7 6.8E-17 2.3E-21 154.4 16.7 163 100-268 66-235 (297)
18 3dlc_A Putative S-adenosyl-L-m 99.7 1.3E-16 4.4E-21 144.8 16.1 159 99-267 31-203 (219)
19 1vl5_A Unknown conserved prote 99.7 1.2E-16 4E-21 149.7 16.1 154 104-267 29-190 (260)
20 3hem_A Cyclopropane-fatty-acyl 99.7 8.8E-17 3E-21 154.2 14.9 160 100-270 60-246 (302)
21 4htf_A S-adenosylmethionine-de 99.7 4.4E-17 1.5E-21 154.8 12.6 154 111-268 67-233 (285)
22 2p7i_A Hypothetical protein; p 99.7 4.1E-17 1.4E-21 151.1 11.7 148 111-267 41-199 (250)
23 3jwh_A HEN1; methyltransferase 99.7 8.3E-17 2.8E-21 146.6 12.5 156 102-262 19-187 (217)
24 3jwg_A HEN1, methyltransferase 99.7 2.3E-16 8E-21 143.7 15.4 155 104-263 21-188 (219)
25 3dh0_A SAM dependent methyltra 99.7 1.5E-16 5E-21 144.9 13.4 151 103-268 28-182 (219)
26 1kpg_A CFA synthase;, cyclopro 99.7 2.2E-16 7.5E-21 150.1 15.0 165 99-269 51-230 (287)
27 3gu3_A Methyltransferase; alph 99.7 4.2E-16 1.4E-20 148.1 16.4 162 100-267 9-190 (284)
28 3dtn_A Putative methyltransfer 99.7 2.2E-16 7.5E-21 145.3 13.8 155 101-265 32-212 (234)
29 1xtp_A LMAJ004091AAA; SGPP, st 99.7 3.3E-16 1.1E-20 145.8 15.1 155 100-268 81-239 (254)
30 3mgg_A Methyltransferase; NYSG 99.7 3.2E-16 1.1E-20 148.0 14.7 164 99-267 24-198 (276)
31 3ocj_A Putative exported prote 99.7 1.9E-16 6.5E-21 152.1 13.1 167 98-266 106-290 (305)
32 2fk8_A Methoxy mycolic acid sy 99.7 4.7E-16 1.6E-20 150.1 16.0 165 99-269 77-256 (318)
33 3e23_A Uncharacterized protein 99.7 5E-16 1.7E-20 140.7 15.0 137 111-267 42-182 (211)
34 3lcc_A Putative methyl chlorid 99.7 1.5E-16 5.1E-21 146.7 11.4 141 111-268 65-208 (235)
35 1y8c_A S-adenosylmethionine-de 99.7 1.1E-16 3.7E-21 148.1 10.5 117 99-218 22-142 (246)
36 1xxl_A YCGJ protein; structura 99.7 6.4E-16 2.2E-20 143.0 15.3 153 105-267 14-174 (239)
37 3h2b_A SAM-dependent methyltra 99.7 8E-17 2.7E-21 145.0 8.8 139 113-269 42-184 (203)
38 1ve3_A Hypothetical protein PH 99.7 3.6E-16 1.2E-20 143.0 13.3 118 96-219 24-143 (227)
39 3ujc_A Phosphoethanolamine N-m 99.7 3.1E-16 1.1E-20 146.8 13.1 159 101-268 44-207 (266)
40 3g2m_A PCZA361.24; SAM-depende 99.7 2.3E-16 7.9E-21 151.0 12.3 166 100-269 71-276 (299)
41 1ri5_A MRNA capping enzyme; me 99.7 5.4E-16 1.8E-20 147.8 14.4 158 111-268 63-251 (298)
42 2a14_A Indolethylamine N-methy 99.7 1E-16 3.6E-21 150.7 9.0 151 109-267 52-238 (263)
43 2ex4_A Adrenal gland protein A 99.7 4.8E-16 1.6E-20 143.9 12.9 144 112-268 79-226 (241)
44 3l8d_A Methyltransferase; stru 99.7 6.2E-16 2.1E-20 142.9 13.4 154 99-267 42-200 (242)
45 2yqz_A Hypothetical protein TT 99.7 2E-15 6.8E-20 141.2 16.2 158 98-265 24-194 (263)
46 3g07_A 7SK snRNA methylphospha 99.6 5E-16 1.7E-20 148.3 11.6 153 111-265 45-267 (292)
47 1pjz_A Thiopurine S-methyltran 99.6 2.6E-16 8.8E-21 142.2 8.8 144 109-267 19-176 (203)
48 3bkw_A MLL3908 protein, S-aden 99.6 1.1E-15 3.9E-20 141.1 13.2 161 102-269 33-216 (243)
49 3ofk_A Nodulation protein S; N 99.6 2E-15 6.9E-20 137.1 13.9 117 98-218 37-154 (216)
50 3hnr_A Probable methyltransfer 99.6 8E-16 2.7E-20 140.1 10.9 141 111-265 44-199 (220)
51 3ou2_A SAM-dependent methyltra 99.6 2.3E-15 7.9E-20 136.6 13.7 144 110-262 44-200 (218)
52 3p9n_A Possible methyltransfer 99.6 1.3E-15 4.5E-20 135.7 11.5 104 111-218 43-153 (189)
53 3d2l_A SAM-dependent methyltra 99.6 3.3E-15 1.1E-19 138.0 14.3 115 97-217 20-136 (243)
54 3pfg_A N-methyltransferase; N, 99.6 1.4E-15 4.9E-20 142.5 11.9 111 99-218 39-151 (263)
55 3dli_A Methyltransferase; PSI- 99.6 1.6E-15 5.4E-20 140.3 11.4 139 111-270 40-187 (240)
56 3ege_A Putative methyltransfer 99.6 5.2E-16 1.8E-20 145.6 8.2 151 99-267 21-178 (261)
57 3sm3_A SAM-dependent methyltra 99.6 6E-15 2.1E-19 135.3 15.1 148 111-266 29-206 (235)
58 3ccf_A Cyclopropane-fatty-acyl 99.6 2.1E-15 7E-20 142.8 12.0 151 104-268 49-211 (279)
59 3thr_A Glycine N-methyltransfe 99.6 1.1E-15 3.7E-20 145.7 10.0 122 94-218 39-175 (293)
60 3orh_A Guanidinoacetate N-meth 99.6 5.6E-16 1.9E-20 143.3 7.4 116 99-217 48-169 (236)
61 2aot_A HMT, histamine N-methyl 99.6 6.6E-15 2.3E-19 140.4 14.9 143 111-263 51-217 (292)
62 1wzn_A SAM-dependent methyltra 99.6 1.2E-14 4.1E-19 135.2 16.2 110 106-218 35-145 (252)
63 3mti_A RRNA methylase; SAM-dep 99.6 6.9E-15 2.4E-19 130.3 13.3 104 111-217 21-134 (185)
64 2i62_A Nicotinamide N-methyltr 99.6 1E-15 3.6E-20 143.3 8.3 152 109-268 53-240 (265)
65 4fsd_A Arsenic methyltransfera 99.6 7.3E-15 2.5E-19 145.6 14.7 151 110-266 81-250 (383)
66 3lpm_A Putative methyltransfer 99.6 1.2E-14 4.1E-19 136.2 15.3 138 106-267 42-201 (259)
67 2xvm_A Tellurite resistance pr 99.6 1E-14 3.4E-19 130.4 14.1 109 105-216 25-134 (199)
68 3e05_A Precorrin-6Y C5,15-meth 99.6 1.3E-14 4.4E-19 130.8 14.9 112 99-217 27-141 (204)
69 2p35_A Trans-aconitate 2-methy 99.6 2.9E-15 9.8E-20 139.8 11.0 148 103-261 24-184 (259)
70 2kw5_A SLR1183 protein; struct 99.6 1.7E-14 5.7E-19 129.6 15.2 140 111-266 29-170 (202)
71 3bkx_A SAM-dependent methyltra 99.6 4.7E-15 1.6E-19 139.8 11.6 161 101-267 32-219 (275)
72 3e8s_A Putative SAM dependent 99.6 2E-15 6.8E-20 137.7 8.6 151 102-266 42-208 (227)
73 1zx0_A Guanidinoacetate N-meth 99.6 3.1E-15 1.1E-19 138.1 9.9 115 101-218 50-170 (236)
74 3grz_A L11 mtase, ribosomal pr 99.6 1.2E-14 4.2E-19 130.9 13.6 135 99-266 49-184 (205)
75 3njr_A Precorrin-6Y methylase; 99.6 1.5E-14 5.2E-19 130.6 14.2 110 100-218 43-154 (204)
76 2g72_A Phenylethanolamine N-me 99.6 5.4E-15 1.8E-19 140.7 11.6 147 111-268 70-257 (289)
77 4hg2_A Methyltransferase type 99.6 2.6E-15 9.1E-20 140.4 8.7 106 98-217 27-134 (257)
78 2frn_A Hypothetical protein PH 99.6 1.4E-14 4.9E-19 137.2 13.6 137 101-263 116-253 (278)
79 2gb4_A Thiopurine S-methyltran 99.6 5.9E-15 2E-19 137.7 10.7 153 100-267 56-227 (252)
80 2r3s_A Uncharacterized protein 99.6 2.7E-14 9.3E-19 138.6 15.9 160 103-267 154-323 (335)
81 2ift_A Putative methylase HI07 99.6 5.4E-15 1.8E-19 133.3 9.4 104 112-219 53-164 (201)
82 2pxx_A Uncharacterized protein 99.6 1.3E-14 4.5E-19 131.2 12.0 116 98-218 30-159 (215)
83 3fpf_A Mtnas, putative unchara 99.6 3.2E-14 1.1E-18 134.3 14.2 103 107-217 117-221 (298)
84 2esr_A Methyltransferase; stru 99.6 1.4E-14 4.8E-19 127.3 11.0 105 110-218 29-138 (177)
85 3m70_A Tellurite resistance pr 99.6 2.2E-14 7.6E-19 136.2 13.2 102 111-216 119-221 (286)
86 3g5t_A Trans-aconitate 3-methy 99.6 2.9E-14 1E-18 136.3 14.1 114 99-217 24-148 (299)
87 1xdz_A Methyltransferase GIDB; 99.6 1.4E-14 4.8E-19 134.1 11.4 99 111-217 69-173 (240)
88 3i9f_A Putative type 11 methyl 99.6 3.8E-15 1.3E-19 130.0 7.2 133 110-268 15-149 (170)
89 1vlm_A SAM-dependent methyltra 99.6 8.8E-15 3E-19 133.4 9.8 135 112-269 47-190 (219)
90 3lec_A NADB-rossmann superfami 99.6 4.9E-14 1.7E-18 128.6 14.4 130 103-264 14-146 (230)
91 3bxo_A N,N-dimethyltransferase 99.6 2.6E-14 8.9E-19 131.6 12.8 111 99-218 29-141 (239)
92 2fhp_A Methylase, putative; al 99.6 1.7E-14 5.8E-19 127.7 11.0 115 100-218 31-154 (187)
93 1dus_A MJ0882; hypothetical pr 99.5 4.2E-14 1.4E-18 125.4 13.5 114 100-217 40-156 (194)
94 2gs9_A Hypothetical protein TT 99.5 1E-13 3.5E-18 125.3 16.1 134 101-255 27-170 (211)
95 3i53_A O-methyltransferase; CO 99.5 5.1E-14 1.7E-18 136.8 15.0 153 109-268 166-322 (332)
96 3kr9_A SAM-dependent methyltra 99.5 5.8E-14 2E-18 127.9 14.3 129 103-263 8-139 (225)
97 3gnl_A Uncharacterized protein 99.5 7.7E-14 2.6E-18 128.3 14.1 129 103-263 14-145 (244)
98 3gwz_A MMCR; methyltransferase 99.5 1.1E-13 3.9E-18 136.3 15.8 158 102-266 192-355 (369)
99 1x19_A CRTF-related protein; m 99.5 1.8E-13 6.2E-18 134.3 17.0 160 102-268 180-349 (359)
100 3hm2_A Precorrin-6Y C5,15-meth 99.5 4.3E-14 1.5E-18 124.0 11.3 110 100-217 13-126 (178)
101 2nxc_A L11 mtase, ribosomal pr 99.5 7.7E-14 2.6E-18 130.4 13.3 135 98-266 108-243 (254)
102 3eey_A Putative rRNA methylase 99.5 6.9E-14 2.3E-18 125.1 12.4 108 110-217 20-138 (197)
103 3uwp_A Histone-lysine N-methyl 99.5 5.5E-14 1.9E-18 137.6 12.6 115 101-219 162-289 (438)
104 1l3i_A Precorrin-6Y methyltran 99.5 1.7E-13 5.8E-18 121.3 14.8 112 99-217 20-133 (192)
105 3fzg_A 16S rRNA methylase; met 99.5 3.7E-14 1.3E-18 124.4 9.9 111 97-215 36-149 (200)
106 2b3t_A Protein methyltransfera 99.5 2.7E-13 9.1E-18 128.2 16.7 144 95-264 93-260 (276)
107 2vdw_A Vaccinia virus capping 99.5 4.8E-14 1.7E-18 135.1 11.6 108 112-219 48-170 (302)
108 2fpo_A Methylase YHHF; structu 99.5 3.8E-14 1.3E-18 127.7 10.3 102 112-218 54-160 (202)
109 1qzz_A RDMB, aclacinomycin-10- 99.5 1.2E-13 4.1E-18 136.2 14.8 159 103-268 173-340 (374)
110 2p8j_A S-adenosylmethionine-de 99.5 5.1E-14 1.8E-18 126.9 10.6 103 111-219 22-129 (209)
111 3mb5_A SAM-dependent methyltra 99.5 1E-13 3.5E-18 129.2 13.0 136 101-267 82-222 (255)
112 3iv6_A Putative Zn-dependent a 99.5 4.8E-14 1.7E-18 131.7 10.6 109 100-218 33-148 (261)
113 3cc8_A Putative methyltransfer 99.5 6.6E-14 2.2E-18 127.8 11.2 150 103-269 24-187 (230)
114 3ntv_A MW1564 protein; rossman 99.5 8.7E-14 3E-18 128.1 12.0 103 111-219 70-177 (232)
115 3g89_A Ribosomal RNA small sub 99.5 1.1E-13 3.6E-18 129.0 12.7 128 111-267 79-212 (249)
116 3mcz_A O-methyltransferase; ad 99.5 8.6E-14 3E-18 136.2 12.6 156 103-263 169-335 (352)
117 1fbn_A MJ fibrillarin homologu 99.5 1.5E-13 5.1E-18 126.3 13.2 105 105-217 67-177 (230)
118 3u81_A Catechol O-methyltransf 99.5 7.5E-14 2.6E-18 127.5 10.6 105 111-219 57-171 (221)
119 3m33_A Uncharacterized protein 99.5 8.4E-14 2.9E-18 127.6 10.8 116 111-266 47-166 (226)
120 3dr5_A Putative O-methyltransf 99.5 1.6E-13 5.5E-18 125.4 12.7 117 98-220 42-165 (221)
121 3cgg_A SAM-dependent methyltra 99.5 4.7E-13 1.6E-17 118.7 15.2 126 111-265 45-173 (195)
122 1tw3_A COMT, carminomycin 4-O- 99.5 1.8E-13 6.3E-18 134.2 13.7 157 104-267 175-339 (360)
123 3ggd_A SAM-dependent methyltra 99.5 5.1E-14 1.7E-18 130.4 8.9 101 110-218 54-163 (245)
124 4e2x_A TCAB9; kijanose, tetron 99.5 2.2E-14 7.5E-19 143.7 7.0 158 98-268 93-254 (416)
125 1jsx_A Glucose-inhibited divis 99.5 1E-13 3.5E-18 124.9 10.6 98 112-217 65-164 (207)
126 3gdh_A Trimethylguanosine synt 99.5 9E-15 3.1E-19 135.2 2.9 103 111-217 77-180 (241)
127 3bgv_A MRNA CAP guanine-N7 met 99.5 1.8E-13 6.1E-18 131.7 12.0 109 111-219 33-156 (313)
128 4df3_A Fibrillarin-like rRNA/T 99.5 3.6E-13 1.2E-17 123.3 13.1 111 99-217 61-181 (233)
129 3tfw_A Putative O-methyltransf 99.5 2E-13 6.8E-18 127.0 11.6 103 111-219 62-171 (248)
130 3mq2_A 16S rRNA methyltransfer 99.5 5.6E-14 1.9E-18 127.9 7.6 152 110-271 25-188 (218)
131 1nt2_A Fibrillarin-like PRE-rR 99.5 2.9E-13 9.9E-18 122.8 12.2 101 109-217 54-160 (210)
132 3lbf_A Protein-L-isoaspartate 99.5 3.7E-13 1.3E-17 121.5 12.9 110 99-219 64-175 (210)
133 3duw_A OMT, O-methyltransferas 99.5 1.8E-13 6E-18 125.0 10.8 103 111-219 57-168 (223)
134 1ws6_A Methyltransferase; stru 99.5 6.8E-14 2.3E-18 121.8 7.4 99 112-218 41-147 (171)
135 3dmg_A Probable ribosomal RNA 99.5 3.6E-13 1.2E-17 133.0 13.3 117 98-217 217-339 (381)
136 3tr6_A O-methyltransferase; ce 99.5 1.6E-13 5.6E-18 125.3 10.2 103 111-219 63-175 (225)
137 2ozv_A Hypothetical protein AT 99.5 1.5E-13 5.1E-18 128.8 10.0 111 106-216 30-168 (260)
138 3evz_A Methyltransferase; NYSG 99.5 4.5E-13 1.5E-17 122.8 12.8 106 110-217 53-178 (230)
139 2ip2_A Probable phenazine-spec 99.5 3E-13 1E-17 131.3 12.2 157 103-267 159-322 (334)
140 2igt_A SAM dependent methyltra 99.5 1.9E-13 6.5E-18 132.6 10.7 106 111-217 152-271 (332)
141 2avn_A Ubiquinone/menaquinone 99.5 3.2E-13 1.1E-17 126.4 11.9 110 98-219 42-153 (260)
142 3k6r_A Putative transferase PH 99.5 2.1E-13 7.2E-18 128.3 10.6 107 101-216 116-223 (278)
143 3dp7_A SAM-dependent methyltra 99.5 1.7E-13 5.9E-18 134.7 10.4 149 111-265 178-340 (363)
144 3lst_A CALO1 methyltransferase 99.4 3E-13 1E-17 132.2 11.2 154 103-266 175-335 (348)
145 3dxy_A TRNA (guanine-N(7)-)-me 99.4 3E-13 1E-17 123.4 10.3 105 112-218 34-150 (218)
146 3bzb_A Uncharacterized protein 99.4 5.1E-13 1.7E-17 126.7 12.3 116 98-216 65-203 (281)
147 2yxd_A Probable cobalt-precorr 99.4 8.8E-13 3E-17 115.8 13.0 108 99-218 22-131 (183)
148 1u2z_A Histone-lysine N-methyl 99.4 8.6E-13 2.9E-17 131.5 14.2 115 100-218 230-359 (433)
149 1yzh_A TRNA (guanine-N(7)-)-me 99.4 5.6E-13 1.9E-17 121.0 11.6 106 111-217 40-155 (214)
150 4dcm_A Ribosomal RNA large sub 99.4 6.8E-13 2.3E-17 130.8 12.8 116 101-216 211-332 (375)
151 3htx_A HEN1; HEN1, small RNA m 99.4 8.8E-13 3E-17 138.2 13.8 116 100-220 709-836 (950)
152 4dzr_A Protein-(glutamine-N5) 99.4 8.3E-14 2.8E-18 125.7 5.4 120 95-216 12-163 (215)
153 2h00_A Methyltransferase 10 do 99.4 1.2E-13 4E-18 128.9 6.4 150 112-266 65-237 (254)
154 2b78_A Hypothetical protein SM 99.4 6.2E-13 2.1E-17 131.7 11.9 108 111-218 211-331 (385)
155 1nv8_A HEMK protein; class I a 99.4 5.6E-13 1.9E-17 126.5 11.1 124 93-217 104-248 (284)
156 3r3h_A O-methyltransferase, SA 99.4 1.5E-13 5.3E-18 127.4 6.7 104 111-220 59-172 (242)
157 2fca_A TRNA (guanine-N(7)-)-me 99.4 7.1E-13 2.4E-17 120.4 10.9 106 111-217 37-152 (213)
158 2gpy_A O-methyltransferase; st 99.4 8.7E-13 3E-17 121.3 11.5 103 111-219 53-161 (233)
159 3id6_C Fibrillarin-like rRNA/T 99.4 4.5E-12 1.5E-16 116.2 16.1 111 99-217 60-180 (232)
160 3c3p_A Methyltransferase; NP_9 99.4 6.7E-13 2.3E-17 120.1 10.2 102 111-219 55-161 (210)
161 1dl5_A Protein-L-isoaspartate 99.4 1.1E-12 3.9E-17 126.4 12.1 111 99-219 62-176 (317)
162 3p2e_A 16S rRNA methylase; met 99.4 3E-13 1E-17 123.9 7.6 156 111-271 23-189 (225)
163 1sui_A Caffeoyl-COA O-methyltr 99.4 7.8E-13 2.7E-17 123.0 10.4 103 111-219 78-191 (247)
164 1vbf_A 231AA long hypothetical 99.4 1.3E-12 4.5E-17 119.7 11.7 107 99-218 57-165 (231)
165 1o9g_A RRNA methyltransferase; 99.4 4.3E-13 1.5E-17 124.8 8.2 115 102-216 41-212 (250)
166 2ipx_A RRNA 2'-O-methyltransfe 99.4 2.1E-12 7.1E-17 118.8 12.6 103 107-217 72-181 (233)
167 3q87_B N6 adenine specific DNA 99.4 4.2E-13 1.4E-17 117.5 7.1 119 111-265 22-147 (170)
168 3tma_A Methyltransferase; thum 99.4 1.5E-12 5.2E-17 127.5 11.9 121 97-218 188-317 (354)
169 2hnk_A SAM-dependent O-methylt 99.4 1.2E-12 4E-17 121.0 10.4 102 111-218 59-181 (239)
170 2b25_A Hypothetical protein; s 99.4 6.4E-13 2.2E-17 129.2 9.0 109 102-218 95-219 (336)
171 1g8a_A Fibrillarin-like PRE-rR 99.4 2.2E-12 7.4E-17 118.1 12.0 101 109-217 70-177 (227)
172 3ajd_A Putative methyltransfer 99.4 1.3E-12 4.4E-17 123.4 10.5 113 108-221 79-214 (274)
173 3c3y_A Pfomt, O-methyltransfer 99.4 1.7E-12 5.9E-17 119.9 11.1 103 111-219 69-182 (237)
174 3a27_A TYW2, uncharacterized p 99.4 1.5E-12 5E-17 122.9 10.8 100 110-217 117-218 (272)
175 2pwy_A TRNA (adenine-N(1)-)-me 99.4 2.5E-12 8.7E-17 119.7 12.0 107 102-217 86-197 (258)
176 2yxe_A Protein-L-isoaspartate 99.4 2.9E-12 1E-16 116.1 12.1 109 100-218 65-177 (215)
177 1o54_A SAM-dependent O-methylt 99.4 1.9E-12 6.6E-17 122.3 11.0 109 102-218 102-213 (277)
178 2yvl_A TRMI protein, hypotheti 99.4 2.9E-12 9.8E-17 118.6 11.8 107 103-218 82-190 (248)
179 3c0k_A UPF0064 protein YCCW; P 99.4 2.2E-12 7.6E-17 128.3 11.4 108 111-218 219-339 (396)
180 3bwc_A Spermidine synthase; SA 99.4 2.2E-12 7.5E-17 123.7 10.8 135 111-265 94-238 (304)
181 1yb2_A Hypothetical protein TA 99.4 1.7E-12 5.8E-17 122.6 9.9 107 103-218 101-211 (275)
182 2as0_A Hypothetical protein PH 99.4 1.7E-12 5.7E-17 129.2 10.1 109 111-219 216-336 (396)
183 2pjd_A Ribosomal RNA small sub 99.4 1.9E-12 6.4E-17 126.3 10.2 115 100-217 184-302 (343)
184 3v97_A Ribosomal RNA large sub 99.3 3.9E-12 1.3E-16 135.0 13.1 108 111-218 538-657 (703)
185 2avd_A Catechol-O-methyltransf 99.3 2.9E-12 1E-16 117.2 10.6 103 111-219 68-180 (229)
186 1i9g_A Hypothetical protein RV 99.3 3.9E-12 1.3E-16 120.1 11.5 110 101-218 88-203 (280)
187 1ixk_A Methyltransferase; open 99.3 3.8E-12 1.3E-16 122.6 11.5 114 106-220 112-248 (315)
188 3cbg_A O-methyltransferase; cy 99.3 2.2E-12 7.7E-17 118.6 9.2 103 111-219 71-183 (232)
189 3ckk_A TRNA (guanine-N(7)-)-me 99.3 4.2E-12 1.4E-16 117.1 10.9 107 111-218 45-168 (235)
190 3hp7_A Hemolysin, putative; st 99.3 1.4E-12 4.7E-17 123.3 7.7 107 99-217 72-184 (291)
191 1af7_A Chemotaxis receptor met 99.3 4.9E-12 1.7E-16 119.1 11.4 125 91-219 87-253 (274)
192 1jg1_A PIMT;, protein-L-isoasp 99.3 5.4E-12 1.8E-16 116.2 11.2 109 100-218 79-189 (235)
193 1i1n_A Protein-L-isoaspartate 99.3 5.9E-12 2E-16 115.0 10.8 100 110-218 75-182 (226)
194 2oxt_A Nucleoside-2'-O-methylt 99.3 2.5E-13 8.6E-18 127.4 1.4 110 103-216 65-183 (265)
195 1fp1_D Isoliquiritigenin 2'-O- 99.3 5.8E-12 2E-16 124.2 10.8 151 102-267 198-360 (372)
196 1wy7_A Hypothetical protein PH 99.3 1.3E-11 4.6E-16 111.0 12.4 100 109-215 46-146 (207)
197 3reo_A (ISO)eugenol O-methyltr 99.3 1.2E-11 4.1E-16 121.8 13.0 154 103-268 193-356 (368)
198 2zfu_A Nucleomethylin, cerebra 99.3 2.8E-12 9.5E-17 116.2 7.7 109 111-264 66-176 (215)
199 4a6d_A Hydroxyindole O-methylt 99.3 1.4E-11 4.9E-16 120.5 13.3 158 102-266 169-333 (353)
200 2qe6_A Uncharacterized protein 99.3 1.5E-11 5E-16 116.1 12.8 103 111-219 76-197 (274)
201 2wa2_A Non-structural protein 99.3 4.8E-13 1.6E-17 126.2 2.6 110 103-216 73-191 (276)
202 4dmg_A Putative uncharacterize 99.3 9.8E-12 3.3E-16 123.0 12.0 105 111-218 213-326 (393)
203 2yx1_A Hypothetical protein MJ 99.3 9.1E-12 3.1E-16 121.1 11.5 96 111-217 194-290 (336)
204 3opn_A Putative hemolysin; str 99.3 6.8E-13 2.3E-17 122.1 3.3 148 100-265 25-182 (232)
205 2pbf_A Protein-L-isoaspartate 99.3 7.8E-12 2.7E-16 114.3 10.3 100 110-218 78-193 (227)
206 3tm4_A TRNA (guanine N2-)-meth 99.3 1.7E-11 5.8E-16 120.9 13.2 117 97-215 203-327 (373)
207 2vdv_E TRNA (guanine-N(7)-)-me 99.3 1E-11 3.5E-16 115.2 10.8 106 111-217 48-172 (246)
208 1mjf_A Spermidine synthase; sp 99.3 5.2E-12 1.8E-16 119.7 8.1 106 111-217 74-192 (281)
209 1wxx_A TT1595, hypothetical pr 99.3 6.4E-12 2.2E-16 124.4 8.8 106 112-219 209-326 (382)
210 2pt6_A Spermidine synthase; tr 99.3 5.8E-12 2E-16 121.5 8.3 107 111-217 115-229 (321)
211 3p9c_A Caffeic acid O-methyltr 99.3 2.4E-11 8.1E-16 119.4 12.8 152 104-268 192-354 (364)
212 4azs_A Methyltransferase WBDD; 99.3 7.3E-12 2.5E-16 130.2 9.4 100 111-215 65-170 (569)
213 3adn_A Spermidine synthase; am 99.3 1.5E-11 5.2E-16 117.0 10.5 107 111-218 82-198 (294)
214 1inl_A Spermidine synthase; be 99.3 1.1E-11 3.9E-16 118.2 9.2 108 111-218 89-205 (296)
215 1zq9_A Probable dimethyladenos 99.2 3.8E-11 1.3E-15 113.9 12.5 86 99-186 15-101 (285)
216 1xj5_A Spermidine synthase 1; 99.2 2.7E-11 9.2E-16 117.3 11.6 108 111-218 119-235 (334)
217 2o07_A Spermidine synthase; st 99.2 1.4E-11 4.9E-16 117.9 9.6 108 111-218 94-209 (304)
218 1r18_A Protein-L-isoaspartate( 99.2 1.6E-11 5.5E-16 112.3 9.5 100 110-218 82-194 (227)
219 3m6w_A RRNA methylase; rRNA me 99.2 1.3E-11 4.5E-16 124.1 9.6 113 107-221 96-232 (464)
220 2bm8_A Cephalosporin hydroxyla 99.2 5E-12 1.7E-16 116.7 5.8 97 111-219 80-188 (236)
221 2p41_A Type II methyltransfera 99.2 4.5E-12 1.5E-16 121.4 5.6 102 110-217 80-190 (305)
222 3m4x_A NOL1/NOP2/SUN family pr 99.2 2E-11 6.7E-16 122.7 10.2 114 107-221 100-237 (456)
223 1iy9_A Spermidine synthase; ro 99.2 1.8E-11 6.2E-16 115.5 9.4 108 111-218 74-189 (275)
224 2qm3_A Predicted methyltransfe 99.2 3E-11 1E-15 119.1 11.3 98 111-214 171-273 (373)
225 1fp2_A Isoflavone O-methyltran 99.2 2.6E-11 8.9E-16 118.6 10.5 141 111-266 187-340 (352)
226 3dou_A Ribosomal RNA large sub 99.2 2.2E-11 7.6E-16 108.6 8.7 95 110-216 23-137 (191)
227 2b2c_A Spermidine synthase; be 99.2 1.1E-11 3.7E-16 119.1 7.0 108 111-218 107-222 (314)
228 2i7c_A Spermidine synthase; tr 99.2 3.5E-11 1.2E-15 114.0 10.4 107 111-218 77-192 (283)
229 3ldu_A Putative methylase; str 99.2 3.6E-11 1.2E-15 118.9 10.8 120 97-216 180-342 (385)
230 1ne2_A Hypothetical protein TA 99.2 6E-11 2E-15 106.2 11.3 90 110-208 49-139 (200)
231 3ldg_A Putative uncharacterize 99.2 7.2E-11 2.4E-15 116.4 12.7 120 97-216 179-341 (384)
232 1ej0_A FTSJ; methyltransferase 99.2 2.1E-11 7E-16 106.1 7.8 104 103-217 13-135 (180)
233 1p91_A Ribosomal RNA large sub 99.2 2.9E-11 9.9E-16 113.4 9.3 101 100-217 74-177 (269)
234 3k0b_A Predicted N6-adenine-sp 99.2 5.3E-11 1.8E-15 117.8 11.2 120 97-216 186-348 (393)
235 1uir_A Polyamine aminopropyltr 99.2 3.5E-11 1.2E-15 115.8 9.5 108 111-218 76-195 (314)
236 2frx_A Hypothetical protein YE 99.2 5.5E-11 1.9E-15 120.6 11.4 109 112-221 117-249 (479)
237 3frh_A 16S rRNA methylase; met 99.2 1.4E-10 4.7E-15 105.5 12.6 99 111-215 104-203 (253)
238 3gjy_A Spermidine synthase; AP 99.2 4E-11 1.4E-15 114.5 9.6 104 114-218 91-200 (317)
239 2yxl_A PH0851 protein, 450AA l 99.2 1.2E-10 4.2E-15 117.5 13.3 114 106-220 253-391 (450)
240 3sso_A Methyltransferase; macr 99.2 4.5E-11 1.5E-15 116.8 9.2 106 98-219 204-325 (419)
241 1zg3_A Isoflavanone 4'-O-methy 99.2 5.6E-11 1.9E-15 116.4 9.8 142 111-267 192-347 (358)
242 2h1r_A Dimethyladenosine trans 99.2 1E-10 3.5E-15 111.7 11.3 85 100-187 30-115 (299)
243 2plw_A Ribosomal RNA methyltra 99.2 8.2E-11 2.8E-15 105.2 9.7 96 110-216 20-152 (201)
244 2ld4_A Anamorsin; methyltransf 99.2 1.8E-11 6.3E-16 107.3 5.2 114 109-259 9-128 (176)
245 2jjq_A Uncharacterized RNA met 99.2 2.3E-10 7.7E-15 114.5 13.3 108 98-218 279-387 (425)
246 3lcv_B Sisomicin-gentamicin re 99.1 8.5E-11 2.9E-15 107.8 9.0 112 98-215 120-233 (281)
247 3giw_A Protein of unknown func 99.1 1.4E-10 4.8E-15 108.2 9.8 121 97-218 62-200 (277)
248 1uwv_A 23S rRNA (uracil-5-)-me 99.1 3.7E-10 1.3E-14 113.5 13.0 113 96-217 270-388 (433)
249 3axs_A Probable N(2),N(2)-dime 99.1 1.1E-10 3.6E-15 115.1 8.5 101 111-218 51-158 (392)
250 2nyu_A Putative ribosomal RNA 99.1 1.3E-10 4.4E-15 103.4 8.3 97 110-217 20-144 (196)
251 2cmg_A Spermidine synthase; tr 99.1 6.5E-11 2.2E-15 110.8 6.2 96 111-217 71-170 (262)
252 1sqg_A SUN protein, FMU protei 99.1 3.1E-10 1.1E-14 113.9 11.5 115 105-221 239-377 (429)
253 2dul_A N(2),N(2)-dimethylguano 99.0 6.4E-10 2.2E-14 109.4 10.2 98 112-217 47-163 (378)
254 3bt7_A TRNA (uracil-5-)-methyl 99.0 5.3E-10 1.8E-14 110.0 9.0 108 98-217 200-325 (369)
255 2xyq_A Putative 2'-O-methyl tr 99.0 7.3E-10 2.5E-14 104.8 9.3 105 98-217 48-170 (290)
256 2b9e_A NOL1/NOP2/SUN domain fa 99.0 2.9E-09 9.8E-14 101.9 13.5 113 107-221 97-237 (309)
257 2f8l_A Hypothetical protein LM 99.0 7.2E-10 2.5E-14 108.0 9.4 106 110-217 128-255 (344)
258 1qam_A ERMC' methyltransferase 99.0 2E-09 6.7E-14 99.7 11.7 83 99-186 17-102 (244)
259 2ih2_A Modification methylase 99.0 6.8E-10 2.3E-14 111.0 9.2 109 99-217 26-163 (421)
260 2qfm_A Spermine synthase; sper 99.0 8E-10 2.7E-14 106.8 9.2 120 99-218 174-314 (364)
261 3gru_A Dimethyladenosine trans 99.0 1.5E-09 5.1E-14 103.0 10.7 84 99-186 37-122 (295)
262 1yub_A Ermam, rRNA methyltrans 99.0 2.3E-11 8E-16 112.8 -2.5 113 101-218 18-145 (245)
263 2okc_A Type I restriction enzy 99.0 9.5E-10 3.3E-14 110.9 8.5 118 99-216 158-305 (445)
264 3tqs_A Ribosomal RNA small sub 99.0 2.3E-09 7.7E-14 99.8 10.0 83 99-186 16-104 (255)
265 3fut_A Dimethyladenosine trans 98.9 3.1E-09 1.1E-13 99.6 10.6 90 87-186 26-118 (271)
266 3v97_A Ribosomal RNA large sub 98.9 7E-09 2.4E-13 110.0 11.4 121 97-217 175-346 (703)
267 3cvo_A Methyltransferase-like 98.8 4.3E-08 1.5E-12 87.4 12.9 97 112-218 30-154 (202)
268 2r6z_A UPF0341 protein in RSP 98.8 2.6E-09 9E-14 99.6 5.1 78 109-187 80-170 (258)
269 3uzu_A Ribosomal RNA small sub 98.8 1.2E-08 4.2E-13 96.0 9.5 81 100-186 30-122 (279)
270 3ftd_A Dimethyladenosine trans 98.8 1E-08 3.4E-13 95.1 7.7 83 99-186 18-103 (249)
271 1m6y_A S-adenosyl-methyltransf 98.8 1.1E-08 3.7E-13 97.5 7.8 81 104-186 18-106 (301)
272 3ll7_A Putative methyltransfer 98.7 1.1E-08 3.6E-13 101.1 7.2 73 112-186 93-171 (410)
273 1qyr_A KSGA, high level kasuga 98.7 1.5E-08 5E-13 94.2 5.1 81 100-186 9-98 (252)
274 2oyr_A UPF0341 protein YHIQ; a 98.7 9E-09 3.1E-13 95.7 3.5 85 102-187 76-173 (258)
275 2ar0_A M.ecoki, type I restric 98.6 7.3E-08 2.5E-12 99.2 8.3 118 99-216 156-310 (541)
276 3o4f_A Spermidine synthase; am 98.5 3.9E-07 1.4E-11 85.7 10.4 108 111-218 82-198 (294)
277 3evf_A RNA-directed RNA polyme 98.5 7.9E-08 2.7E-12 88.8 4.7 110 105-217 67-183 (277)
278 3khk_A Type I restriction-modi 98.4 2.8E-07 9.6E-12 94.8 7.6 117 99-216 232-393 (544)
279 3lkd_A Type I restriction-modi 98.4 1.3E-06 4.3E-11 89.8 10.7 106 110-216 219-356 (542)
280 2wk1_A NOVP; transferase, O-me 98.4 3.4E-06 1.2E-10 79.1 12.7 120 95-219 89-245 (282)
281 3gcz_A Polyprotein; flavivirus 98.4 1.8E-07 6.2E-12 86.5 3.6 110 103-217 81-200 (282)
282 4fzv_A Putative methyltransfer 98.3 1.6E-06 5.4E-11 84.3 9.3 115 107-221 143-287 (359)
283 3p8z_A Mtase, non-structural p 98.3 5.6E-07 1.9E-11 80.5 5.0 111 103-216 69-184 (267)
284 4auk_A Ribosomal RNA large sub 98.2 3.6E-06 1.2E-10 81.3 9.4 69 110-186 209-278 (375)
285 2qy6_A UPF0209 protein YFCK; s 98.2 1.7E-06 5.8E-11 80.3 6.4 106 111-216 59-211 (257)
286 3s1s_A Restriction endonucleas 98.2 3.9E-06 1.3E-10 88.3 9.6 106 111-216 320-463 (878)
287 3c6k_A Spermine synthase; sper 98.2 2.2E-06 7.6E-11 83.1 7.2 120 98-217 190-330 (381)
288 3lkz_A Non-structural protein 98.1 7.3E-06 2.5E-10 75.8 8.5 111 102-216 84-202 (321)
289 3b5i_A S-adenosyl-L-methionine 98.1 2E-05 6.9E-10 76.8 12.2 103 113-218 53-225 (374)
290 2k4m_A TR8_protein, UPF0146 pr 98.1 6.1E-06 2.1E-10 68.6 7.2 68 98-184 23-95 (153)
291 3eld_A Methyltransferase; flav 98.0 3.7E-06 1.3E-10 78.2 4.8 112 101-217 71-190 (300)
292 2px2_A Genome polyprotein [con 98.0 2.6E-05 9E-10 70.9 9.0 110 102-216 63-181 (269)
293 1wg8_A Predicted S-adenosylmet 97.9 1.3E-05 4.5E-10 74.4 6.8 78 103-186 13-97 (285)
294 2efj_A 3,7-dimethylxanthine me 97.8 0.00017 5.9E-09 70.4 13.1 151 113-267 53-292 (384)
295 1m6e_X S-adenosyl-L-methionnin 97.8 2.5E-05 8.6E-10 75.6 6.6 153 112-267 51-280 (359)
296 2zig_A TTHA0409, putative modi 97.7 0.0001 3.6E-09 69.8 8.8 57 99-157 223-280 (297)
297 3r24_A NSP16, 2'-O-methyl tran 97.6 0.00013 4.4E-09 67.4 7.2 106 97-216 93-215 (344)
298 3ufb_A Type I restriction-modi 97.5 0.00032 1.1E-08 71.9 10.1 89 98-187 203-311 (530)
299 1i4w_A Mitochondrial replicati 97.1 0.00089 3.1E-08 64.6 7.1 80 87-174 31-118 (353)
300 1g60_A Adenine-specific methyl 97.0 0.0012 4.2E-08 61.0 7.3 58 99-158 200-258 (260)
301 2oo3_A Protein involved in cat 97.0 0.00037 1.3E-08 64.7 3.5 108 98-216 81-196 (283)
302 3tka_A Ribosomal RNA small sub 96.9 0.0031 1.1E-07 59.9 9.0 80 102-186 47-136 (347)
303 1rjd_A PPM1P, carboxy methyl t 96.7 0.0077 2.6E-07 57.8 10.1 119 95-215 80-229 (334)
304 3vyw_A MNMC2; tRNA wobble urid 96.4 0.02 6.9E-07 53.8 10.7 129 112-267 96-248 (308)
305 1f8f_A Benzyl alcohol dehydrog 96.2 0.0026 9E-08 61.9 4.0 96 106-217 184-288 (371)
306 2c7p_A Modification methylase 96.1 0.01 3.6E-07 56.7 7.3 67 112-186 10-79 (327)
307 3g7u_A Cytosine-specific methy 95.9 0.0097 3.3E-07 58.0 6.4 68 114-187 3-80 (376)
308 1g55_A DNA cytosine methyltran 95.9 0.0042 1.5E-07 59.8 3.7 68 114-187 3-77 (343)
309 2dph_A Formaldehyde dismutase; 95.9 0.021 7.2E-07 56.0 8.8 102 107-217 180-298 (398)
310 2py6_A Methyltransferase FKBM; 95.9 0.02 6.9E-07 56.5 8.6 62 111-172 225-293 (409)
311 2uyo_A Hypothetical protein ML 95.7 0.086 2.9E-06 49.8 11.6 122 95-219 86-219 (310)
312 1pl8_A Human sorbitol dehydrog 95.4 0.024 8.2E-07 54.6 6.9 94 108-217 167-272 (356)
313 4ej6_A Putative zinc-binding d 95.3 0.058 2E-06 52.3 9.4 96 106-217 176-283 (370)
314 1kol_A Formaldehyde dehydrogen 95.3 0.047 1.6E-06 53.4 8.8 101 108-217 181-299 (398)
315 3m6i_A L-arabinitol 4-dehydrog 95.3 0.037 1.3E-06 53.4 7.8 97 107-217 174-282 (363)
316 3ip1_A Alcohol dehydrogenase, 95.3 0.017 5.7E-07 56.8 5.4 98 109-218 210-318 (404)
317 3fpc_A NADP-dependent alcohol 95.3 0.006 2.1E-07 58.8 2.1 96 106-217 160-265 (352)
318 3goh_A Alcohol dehydrogenase, 95.2 0.052 1.8E-06 51.2 8.3 90 106-217 136-228 (315)
319 3iei_A Leucine carboxyl methyl 95.1 0.68 2.3E-05 44.0 15.7 163 95-265 72-279 (334)
320 3tos_A CALS11; methyltransfera 94.9 0.21 7.2E-06 45.7 11.3 103 111-219 69-218 (257)
321 3two_A Mannitol dehydrogenase; 94.8 0.051 1.8E-06 52.1 7.1 89 109-217 173-264 (348)
322 3uko_A Alcohol dehydrogenase c 94.7 0.071 2.4E-06 51.7 8.0 97 104-217 185-294 (378)
323 1pqw_A Polyketide synthase; ro 94.7 0.024 8.1E-07 49.6 4.1 94 104-217 30-136 (198)
324 3gms_A Putative NADPH:quinone 94.6 0.012 4.2E-07 56.3 2.3 96 104-217 136-242 (340)
325 3s2e_A Zinc-containing alcohol 94.6 0.046 1.6E-06 52.2 6.2 95 106-217 160-262 (340)
326 3uog_A Alcohol dehydrogenase; 94.5 0.0091 3.1E-07 57.9 1.1 94 106-217 183-286 (363)
327 2vz8_A Fatty acid synthase; tr 94.3 0.0087 3E-07 71.8 0.5 101 111-218 1239-1348(2512)
328 1boo_A Protein (N-4 cytosine-s 94.3 0.011 3.7E-07 56.4 1.1 73 99-175 240-313 (323)
329 1p0f_A NADP-dependent alcohol 94.3 0.13 4.6E-06 49.6 8.9 95 106-217 185-292 (373)
330 2fzw_A Alcohol dehydrogenase c 94.2 0.18 6E-06 48.8 9.5 96 106-217 184-291 (373)
331 1v3u_A Leukotriene B4 12- hydr 94.1 0.056 1.9E-06 51.4 5.6 94 104-217 137-243 (333)
332 1cdo_A Alcohol dehydrogenase; 94.0 0.16 5.3E-06 49.2 8.7 96 106-217 186-293 (374)
333 2d8a_A PH0655, probable L-thre 93.9 0.028 9.5E-07 54.0 3.2 95 106-217 162-266 (348)
334 1uuf_A YAHK, zinc-type alcohol 93.9 0.055 1.9E-06 52.5 5.3 90 109-217 191-287 (369)
335 2jhf_A Alcohol dehydrogenase E 93.9 0.17 5.8E-06 48.9 8.7 95 106-217 185-292 (374)
336 3ubt_Y Modification methylase 93.8 0.11 3.8E-06 49.3 7.2 66 114-186 1-69 (331)
337 1e3i_A Alcohol dehydrogenase, 93.8 0.17 5.7E-06 49.0 8.5 97 105-217 188-296 (376)
338 3jv7_A ADH-A; dehydrogenase, n 93.8 0.076 2.6E-06 50.8 5.9 93 109-217 168-269 (345)
339 1e3j_A NADP(H)-dependent ketos 93.7 0.09 3.1E-06 50.4 6.4 94 107-217 163-270 (352)
340 2qrv_A DNA (cytosine-5)-methyl 93.6 0.14 4.8E-06 48.0 7.3 70 111-186 14-91 (295)
341 2dq4_A L-threonine 3-dehydroge 93.5 0.014 4.7E-07 56.0 0.2 92 107-217 160-261 (343)
342 3qv2_A 5-cytosine DNA methyltr 93.5 0.11 3.8E-06 49.4 6.4 67 113-186 10-84 (327)
343 4b7c_A Probable oxidoreductase 93.5 0.023 7.9E-07 54.2 1.7 98 103-217 140-247 (336)
344 1vj0_A Alcohol dehydrogenase, 93.5 0.18 6.2E-06 48.9 8.1 95 107-217 189-297 (380)
345 3pvc_A TRNA 5-methylaminomethy 93.3 0.11 3.8E-06 54.7 6.8 106 111-216 57-209 (689)
346 3jyn_A Quinone oxidoreductase; 93.2 0.027 9.1E-07 53.6 1.6 96 104-217 132-238 (325)
347 4eye_A Probable oxidoreductase 93.1 0.021 7.3E-07 54.7 0.8 96 103-217 150-256 (342)
348 4dcm_A Ribosomal RNA large sub 92.9 0.56 1.9E-05 45.4 10.5 95 112-216 38-134 (375)
349 3qwb_A Probable quinone oxidor 92.7 0.027 9.4E-07 53.7 0.9 95 105-217 141-246 (334)
350 1yb5_A Quinone oxidoreductase; 92.7 0.052 1.8E-06 52.2 2.8 97 104-218 162-269 (351)
351 2b5w_A Glucose dehydrogenase; 92.7 0.16 5.6E-06 48.7 6.4 85 114-217 174-272 (357)
352 4h0n_A DNMT2; SAH binding, tra 92.6 0.11 3.7E-06 49.6 4.9 67 114-186 4-77 (333)
353 4a2c_A Galactitol-1-phosphate 92.6 0.15 5E-06 48.7 5.9 96 106-217 154-259 (346)
354 1piw_A Hypothetical zinc-type 92.6 0.068 2.3E-06 51.5 3.5 95 108-217 175-275 (360)
355 3fbg_A Putative arginate lyase 92.5 0.12 4.3E-06 49.3 5.3 87 112-216 150-246 (346)
356 2j3h_A NADP-dependent oxidored 92.4 0.1 3.4E-06 49.8 4.4 97 104-217 147-254 (345)
357 4dvj_A Putative zinc-dependent 92.3 0.1 3.5E-06 50.3 4.4 89 112-217 171-269 (363)
358 2hcy_A Alcohol dehydrogenase 1 92.3 0.15 5.1E-06 48.8 5.5 90 109-217 166-268 (347)
359 2eih_A Alcohol dehydrogenase; 92.2 0.17 5.8E-06 48.3 5.7 92 108-217 162-264 (343)
360 2c0c_A Zinc binding alcohol de 91.9 0.14 4.9E-06 49.3 4.8 94 106-217 157-260 (362)
361 1rjw_A ADH-HT, alcohol dehydro 91.6 0.21 7.1E-06 47.6 5.6 90 109-217 161-260 (339)
362 4dup_A Quinone oxidoreductase; 91.4 0.041 1.4E-06 52.9 0.4 93 106-217 161-264 (353)
363 1qor_A Quinone oxidoreductase; 91.4 0.055 1.9E-06 51.3 1.3 93 107-217 135-238 (327)
364 1iz0_A Quinone oxidoreductase; 90.7 0.12 4.3E-06 48.2 3.0 89 110-217 123-217 (302)
365 1zsy_A Mitochondrial 2-enoyl t 90.6 0.45 1.5E-05 45.6 7.0 102 103-217 158-269 (357)
366 2h6e_A ADH-4, D-arabinose 1-de 90.6 0.42 1.4E-05 45.5 6.7 91 109-217 168-268 (344)
367 3ps9_A TRNA 5-methylaminomethy 90.5 0.89 3E-05 47.6 9.7 106 112-217 66-218 (676)
368 4eez_A Alcohol dehydrogenase 1 90.4 0.16 5.6E-06 48.4 3.7 98 108-218 159-263 (348)
369 1jvb_A NAD(H)-dependent alcoho 90.4 0.43 1.5E-05 45.5 6.6 93 108-217 166-270 (347)
370 2zb4_A Prostaglandin reductase 90.3 0.2 6.7E-06 48.1 4.1 96 106-217 152-259 (357)
371 3gaz_A Alcohol dehydrogenase s 90.2 0.091 3.1E-06 50.2 1.6 91 106-217 144-245 (343)
372 1wly_A CAAR, 2-haloacrylate re 90.1 0.097 3.3E-06 49.8 1.7 94 106-217 139-243 (333)
373 3krt_A Crotonyl COA reductase; 90.1 0.55 1.9E-05 46.7 7.3 92 108-217 224-343 (456)
374 3oig_A Enoyl-[acyl-carrier-pro 90.1 2.5 8.7E-05 38.1 11.3 104 111-216 5-145 (266)
375 2j8z_A Quinone oxidoreductase; 89.9 0.075 2.6E-06 51.1 0.7 94 106-217 156-260 (354)
376 2zig_A TTHA0409, putative modi 89.4 0.22 7.7E-06 46.5 3.6 58 162-219 21-98 (297)
377 3tqh_A Quinone oxidoreductase; 89.1 1.2 4E-05 41.9 8.5 94 106-217 146-244 (321)
378 4eso_A Putative oxidoreductase 88.9 1.7 5.9E-05 39.2 9.2 70 111-186 6-90 (255)
379 1eg2_A Modification methylase 88.9 1 3.4E-05 42.6 7.7 58 98-157 229-290 (319)
380 3me5_A Cytosine-specific methy 88.7 0.56 1.9E-05 47.0 6.1 71 113-186 88-177 (482)
381 3ijr_A Oxidoreductase, short c 88.3 3.5 0.00012 38.0 11.0 103 111-216 45-180 (291)
382 3grk_A Enoyl-(acyl-carrier-pro 88.1 5.2 0.00018 36.9 12.1 72 111-186 29-117 (293)
383 3nx4_A Putative oxidoreductase 87.7 0.7 2.4E-05 43.4 5.9 86 113-217 148-240 (324)
384 3fwz_A Inner membrane protein 87.6 1.5 5.1E-05 35.6 7.1 87 114-215 8-102 (140)
385 4fn4_A Short chain dehydrogena 87.2 2.2 7.4E-05 38.8 8.7 73 111-186 5-92 (254)
386 3edm_A Short chain dehydrogena 87.2 3.2 0.00011 37.5 9.8 73 111-186 6-94 (259)
387 4g81_D Putative hexonate dehyd 86.9 1.6 5.4E-05 39.8 7.5 73 111-186 7-94 (255)
388 2cdc_A Glucose dehydrogenase g 86.6 1.6 5.3E-05 41.9 7.8 83 113-217 181-277 (366)
389 2gdz_A NAD+-dependent 15-hydro 86.3 3.3 0.00011 37.4 9.5 75 111-186 5-94 (267)
390 3t4x_A Oxidoreductase, short c 86.2 1.7 5.9E-05 39.5 7.5 75 111-186 8-93 (267)
391 3k31_A Enoyl-(acyl-carrier-pro 86.1 4.2 0.00014 37.5 10.2 72 111-186 28-116 (296)
392 1gu7_A Enoyl-[acyl-carrier-pro 86.0 0.87 3E-05 43.5 5.6 100 104-217 158-274 (364)
393 1boo_A Protein (N-4 cytosine-s 85.8 0.49 1.7E-05 44.8 3.6 59 161-219 13-85 (323)
394 2cf5_A Atccad5, CAD, cinnamyl 85.4 0.63 2.2E-05 44.5 4.2 93 109-217 176-274 (357)
395 4a0s_A Octenoyl-COA reductase/ 85.2 0.85 2.9E-05 45.1 5.2 94 108-217 216-335 (447)
396 3ggo_A Prephenate dehydrogenas 85.2 3.9 0.00013 38.3 9.5 88 113-215 33-125 (314)
397 1zkd_A DUF185; NESG, RPR58, st 85.1 3.3 0.00011 40.0 9.1 69 112-186 80-157 (387)
398 4fgs_A Probable dehydrogenase 84.5 3.2 0.00011 38.2 8.4 70 111-186 27-111 (273)
399 3ius_A Uncharacterized conserv 84.4 5 0.00017 36.3 9.8 96 114-222 6-107 (286)
400 1pjc_A Protein (L-alanine dehy 84.4 0.66 2.2E-05 44.6 3.8 97 111-216 165-265 (361)
401 3ioy_A Short-chain dehydrogena 84.3 3.1 0.00011 38.9 8.5 75 111-186 6-95 (319)
402 1zcj_A Peroxisomal bifunctiona 84.3 6.6 0.00023 38.9 11.2 97 113-218 37-150 (463)
403 4da9_A Short-chain dehydrogena 84.3 6 0.0002 36.1 10.3 74 110-186 26-115 (280)
404 1yqd_A Sinapyl alcohol dehydro 84.1 0.87 3E-05 43.7 4.6 93 109-217 183-281 (366)
405 1wma_A Carbonyl reductase [NAD 84.0 4 0.00014 36.6 8.9 72 112-186 3-90 (276)
406 1xa0_A Putative NADPH dependen 83.7 0.5 1.7E-05 44.6 2.6 93 109-217 145-245 (328)
407 3ado_A Lambda-crystallin; L-gu 83.6 3.2 0.00011 39.1 8.1 102 113-222 6-127 (319)
408 2vn8_A Reticulon-4-interacting 83.6 0.97 3.3E-05 43.5 4.7 92 110-217 181-279 (375)
409 3u5t_A 3-oxoacyl-[acyl-carrier 83.3 6.1 0.00021 35.8 9.8 73 111-186 25-113 (267)
410 1tt7_A YHFP; alcohol dehydroge 83.2 0.72 2.5E-05 43.5 3.5 91 109-217 146-246 (330)
411 3rku_A Oxidoreductase YMR226C; 83.2 4.4 0.00015 37.3 8.9 76 111-186 31-123 (287)
412 1xg5_A ARPG836; short chain de 83.0 4.7 0.00016 36.6 9.0 75 111-186 30-119 (279)
413 4f3n_A Uncharacterized ACR, CO 82.8 2.9 9.8E-05 41.1 7.6 68 113-186 138-215 (432)
414 3dmg_A Probable ribosomal RNA 82.8 3.3 0.00011 40.0 8.1 103 102-217 36-138 (381)
415 3ucx_A Short chain dehydrogena 82.7 6.1 0.00021 35.6 9.5 73 111-186 9-96 (264)
416 2zwa_A Leucine carboxyl methyl 82.6 17 0.00058 37.9 14.1 118 96-216 88-252 (695)
417 3lf2_A Short chain oxidoreduct 82.3 5.3 0.00018 36.1 9.0 75 111-186 6-95 (265)
418 3jyo_A Quinate/shikimate dehyd 82.1 4.3 0.00015 37.5 8.3 86 98-186 112-202 (283)
419 3o8q_A Shikimate 5-dehydrogena 81.9 11 0.00037 34.7 11.0 81 98-186 111-195 (281)
420 3rkr_A Short chain oxidoreduct 81.9 4.6 0.00016 36.4 8.4 75 109-186 25-114 (262)
421 3nyw_A Putative oxidoreductase 81.9 4.5 0.00015 36.2 8.2 75 111-186 5-95 (250)
422 3o38_A Short chain dehydrogena 81.9 4.7 0.00016 36.3 8.5 74 111-186 20-109 (266)
423 3h7a_A Short chain dehydrogena 81.8 3.8 0.00013 36.8 7.7 73 111-186 5-91 (252)
424 2dpo_A L-gulonate 3-dehydrogen 81.5 13 0.00044 34.9 11.5 96 114-217 7-122 (319)
425 3tjr_A Short chain dehydrogena 81.3 6.5 0.00022 36.3 9.3 74 110-186 28-116 (301)
426 3swr_A DNA (cytosine-5)-methyl 81.3 1.9 6.4E-05 47.1 6.1 69 112-186 539-626 (1002)
427 3v8b_A Putative dehydrogenase, 81.3 4.5 0.00015 37.1 8.1 73 111-186 26-113 (283)
428 3qiv_A Short-chain dehydrogena 81.2 6.1 0.00021 35.2 8.9 73 111-186 7-94 (253)
429 4hp8_A 2-deoxy-D-gluconate 3-d 81.1 6.2 0.00021 35.6 8.7 71 111-186 7-87 (247)
430 2eez_A Alanine dehydrogenase; 81.0 1.5 5.1E-05 42.2 4.9 98 111-217 164-265 (369)
431 3gqv_A Enoyl reductase; medium 80.7 1.6 5.3E-05 42.0 4.9 90 111-218 163-263 (371)
432 2ew2_A 2-dehydropantoate 2-red 80.5 17 0.00057 33.3 12.0 88 114-216 4-106 (316)
433 3svt_A Short-chain type dehydr 80.1 6.8 0.00023 35.6 8.9 75 111-186 9-99 (281)
434 3g0o_A 3-hydroxyisobutyrate de 79.7 4.3 0.00015 37.6 7.5 87 113-215 7-99 (303)
435 4a27_A Synaptic vesicle membra 79.7 0.91 3.1E-05 43.2 2.8 95 104-217 134-237 (349)
436 1iy8_A Levodione reductase; ox 79.6 7.1 0.00024 35.2 8.8 75 111-186 11-100 (267)
437 3gaf_A 7-alpha-hydroxysteroid 79.3 6.5 0.00022 35.3 8.4 73 111-186 10-97 (256)
438 2vhw_A Alanine dehydrogenase; 79.3 1.1 3.9E-05 43.2 3.4 98 111-217 166-267 (377)
439 1jw9_B Molybdopterin biosynthe 79.1 3.8 0.00013 37.0 6.6 73 113-185 31-128 (249)
440 1f0y_A HCDH, L-3-hydroxyacyl-C 79.0 15 0.0005 33.8 11.0 94 114-215 16-133 (302)
441 2f1k_A Prephenate dehydrogenas 78.8 11 0.00039 34.0 10.0 84 115-215 2-88 (279)
442 4e12_A Diketoreductase; oxidor 78.6 10 0.00034 34.7 9.6 94 114-215 5-118 (283)
443 1h2b_A Alcohol dehydrogenase; 78.5 1.1 3.6E-05 43.0 2.9 93 108-217 182-284 (359)
444 3o26_A Salutaridine reductase; 78.3 5.6 0.00019 36.4 7.9 74 111-186 10-99 (311)
445 3p2y_A Alanine dehydrogenase/p 78.2 0.73 2.5E-05 44.6 1.6 40 112-152 183-225 (381)
446 4dry_A 3-oxoacyl-[acyl-carrier 78.0 4 0.00014 37.4 6.6 74 111-186 31-119 (281)
447 3c85_A Putative glutathione-re 78.0 5.4 0.00018 33.6 7.1 90 112-216 38-137 (183)
448 3sju_A Keto reductase; short-c 77.8 7.1 0.00024 35.5 8.3 73 111-186 22-109 (279)
449 3lyl_A 3-oxoacyl-(acyl-carrier 77.6 7.5 0.00026 34.4 8.2 73 111-186 3-90 (247)
450 3tfo_A Putative 3-oxoacyl-(acy 77.5 7.1 0.00024 35.3 8.1 72 112-186 3-89 (264)
451 3pk0_A Short-chain dehydrogena 77.3 6.6 0.00023 35.3 7.8 74 111-186 8-96 (262)
452 3ppi_A 3-hydroxyacyl-COA dehyd 76.6 7 0.00024 35.4 7.9 69 111-185 28-110 (281)
453 3pwz_A Shikimate dehydrogenase 76.4 13 0.00043 34.0 9.5 80 99-186 105-189 (272)
454 3f9i_A 3-oxoacyl-[acyl-carrier 76.2 7.4 0.00025 34.5 7.8 71 110-186 11-92 (249)
455 3llv_A Exopolyphosphatase-rela 75.8 3.6 0.00012 33.1 5.0 64 113-185 6-77 (141)
456 1yb1_A 17-beta-hydroxysteroid 75.8 13 0.00044 33.5 9.4 74 110-186 28-116 (272)
457 3imf_A Short chain dehydrogena 75.6 5.9 0.0002 35.5 7.0 73 111-186 4-91 (257)
458 3hwr_A 2-dehydropantoate 2-red 75.5 22 0.00076 33.0 11.2 90 112-216 18-118 (318)
459 3pgx_A Carveol dehydrogenase; 75.3 11 0.00038 34.1 8.9 74 110-186 12-113 (280)
460 2hwk_A Helicase NSP2; rossman 75.3 1.9 6.6E-05 39.6 3.4 50 167-216 195-252 (320)
461 3k6j_A Protein F01G10.3, confi 75.0 14 0.00047 36.6 9.8 98 114-220 55-168 (460)
462 4fs3_A Enoyl-[acyl-carrier-pro 74.9 8 0.00027 34.8 7.7 74 111-186 4-94 (256)
463 4dio_A NAD(P) transhydrogenase 74.8 1.5 5.1E-05 42.8 2.7 40 112-152 189-231 (405)
464 3c24_A Putative oxidoreductase 74.7 20 0.00067 32.6 10.4 83 114-215 12-98 (286)
465 1lss_A TRK system potassium up 74.6 27 0.00092 27.2 10.1 65 113-185 4-76 (140)
466 1eg2_A Modification methylase 74.5 1.8 6.3E-05 40.8 3.3 58 161-218 37-106 (319)
467 3r1i_A Short-chain type dehydr 74.4 7.7 0.00026 35.3 7.5 73 111-186 30-117 (276)
468 2jah_A Clavulanic acid dehydro 74.1 14 0.00047 32.8 9.0 73 111-186 5-92 (247)
469 1zud_1 Adenylyltransferase THI 74.1 8.3 0.00028 34.7 7.5 32 112-143 27-60 (251)
470 3awd_A GOX2181, putative polyo 73.9 14 0.00047 32.8 9.0 73 111-186 11-98 (260)
471 2rhc_B Actinorhodin polyketide 73.9 13 0.00045 33.6 9.0 73 111-186 20-107 (277)
472 3rwb_A TPLDH, pyridoxal 4-dehy 73.8 8.9 0.0003 34.1 7.6 70 111-186 4-88 (247)
473 2cvz_A Dehydrogenase, 3-hydrox 73.7 12 0.00041 33.9 8.7 83 115-216 3-88 (289)
474 3ce6_A Adenosylhomocysteinase; 73.5 8.3 0.00028 38.6 7.9 86 110-216 271-359 (494)
475 3h8v_A Ubiquitin-like modifier 73.4 14 0.00047 34.2 8.9 34 111-144 34-69 (292)
476 2ae2_A Protein (tropinone redu 73.4 14 0.00048 32.9 9.0 73 111-186 7-95 (260)
477 3tsc_A Putative oxidoreductase 73.4 14 0.00047 33.4 9.0 73 111-186 9-109 (277)
478 1ae1_A Tropinone reductase-I; 73.4 14 0.00049 33.3 9.1 73 111-186 19-107 (273)
479 3mog_A Probable 3-hydroxybutyr 73.3 22 0.00077 35.3 11.1 98 114-220 6-122 (483)
480 4e21_A 6-phosphogluconate dehy 73.1 5.3 0.00018 38.2 6.2 88 112-215 21-112 (358)
481 2h78_A Hibadh, 3-hydroxyisobut 72.9 10 0.00034 34.9 8.0 85 114-215 4-94 (302)
482 3gvc_A Oxidoreductase, probabl 72.6 8.8 0.0003 34.9 7.4 70 111-186 27-111 (277)
483 3zwc_A Peroxisomal bifunctiona 72.4 21 0.00073 37.6 11.1 100 114-222 317-433 (742)
484 3d1l_A Putative NADP oxidoredu 72.3 16 0.00056 32.7 9.1 88 113-216 10-100 (266)
485 4imr_A 3-oxoacyl-(acyl-carrier 72.2 7.5 0.00026 35.3 6.8 73 111-186 31-117 (275)
486 1l7d_A Nicotinamide nucleotide 72.1 2.2 7.4E-05 41.3 3.2 39 111-150 170-211 (384)
487 2y0c_A BCEC, UDP-glucose dehyd 72.1 8.1 0.00028 38.5 7.5 103 111-217 6-127 (478)
488 3tnl_A Shikimate dehydrogenase 72.0 5.1 0.00017 37.6 5.7 89 97-186 138-234 (315)
489 3ftp_A 3-oxoacyl-[acyl-carrier 72.0 8.6 0.00029 34.8 7.2 73 111-186 26-113 (270)
490 4e6p_A Probable sorbitol dehyd 72.0 14 0.00048 33.0 8.6 70 111-186 6-90 (259)
491 3rih_A Short chain dehydrogena 72.0 5.8 0.0002 36.5 6.1 74 111-186 39-127 (293)
492 1zem_A Xylitol dehydrogenase; 71.9 14 0.00048 33.0 8.6 73 111-186 5-92 (262)
493 4fc7_A Peroxisomal 2,4-dienoyl 71.9 11 0.00037 34.2 7.9 73 111-186 25-113 (277)
494 3ghy_A Ketopantoate reductase 71.9 9.6 0.00033 35.8 7.7 89 114-216 4-102 (335)
495 4ibo_A Gluconate dehydrogenase 71.8 6.9 0.00024 35.5 6.5 73 111-186 24-111 (271)
496 4iin_A 3-ketoacyl-acyl carrier 71.8 12 0.00042 33.6 8.2 73 111-186 27-115 (271)
497 1g60_A Adenine-specific methyl 71.7 2.5 8.4E-05 38.4 3.3 55 163-217 5-73 (260)
498 3f1l_A Uncharacterized oxidore 71.5 11 0.00039 33.5 7.8 74 111-186 10-100 (252)
499 4egf_A L-xylulose reductase; s 71.5 9.2 0.00032 34.4 7.3 73 111-186 18-106 (266)
500 3cxt_A Dehydrogenase with diff 71.5 14 0.00048 33.8 8.6 73 111-186 32-119 (291)
No 1
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=100.00 E-value=2.8e-60 Score=466.65 Aligned_cols=327 Identities=45% Similarity=0.798 Sum_probs=284.5
Q ss_pred CCCchhhHHHhhhccchhhhhhccChhhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHH
Q 014247 69 PCTDFDVAYFHSYAHVGIHEEMIKDRVRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAV 148 (428)
Q Consensus 69 ~~~~~~~~~f~~y~~~~~~~~~~~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~ 148 (428)
.....+..||++|+++++|+.|++|..|+.+|+++|.++....+|++|||||||+|.+++++|++|+++|+|||.|+++.
T Consensus 40 ~~~~~d~~Yf~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~ 119 (376)
T 4hc4_A 40 TKRERDQLYYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQ 119 (376)
T ss_dssp ---------CCCHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHH
T ss_pred ccccchhhhhhhccCcHHHHHHhCCHHHHHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHH
Confidence 33456778999999999999999999999999999998777789999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCC
Q 014247 149 QANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTH 228 (428)
Q Consensus 149 ~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~ 228 (428)
.|+++++.|++.++|++++++++++.++++||+|||++|++++.++..++.++.++.++|+|||+++|+.+++|++++..
T Consensus 120 ~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~atly~apie~ 199 (376)
T 4hc4_A 120 QAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIVPISD 199 (376)
T ss_dssp HHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEEEEEEEEECC
T ss_pred HHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCccceEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccchhhhhhhhhcc---CCCCcchhHHHHHhc--CCCCceEEeecCCccccCCeeEEEEeCCCCCccccc--ceeeeeEE
Q 014247 229 PDRYSESIDFWRNV---YGIDMSAMMPLAKQC--AFEEPSVETITGENVLTWPHVVKHVDCYTIQIHELE--SIATTFKF 301 (428)
Q Consensus 229 ~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~--Gf~~~~~~~~~~~~~ls~p~~~~~~d~~~~~~~~l~--~~~~~~~~ 301 (428)
... .....+|.++ ||++++.+.....+. .+..+.+..+.+..+++.|+.+..+|+.+.+.++.. .+...+++
T Consensus 200 ~~l-~~~i~~w~~v~~~yGfd~s~~~~~~~~~~~~~~e~~v~~~~~~~~Ls~p~~i~~~D~~~~~~~~~~~~~~~~~f~~ 278 (376)
T 4hc4_A 200 QML-EWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRC 278 (376)
T ss_dssp HHH-HHHHHGGGGHHHHHSCCCGGGHHHHHHHHHSSCEEEEECCCGGGBCSCCEEEEEEETTCTTHHHHHHHCEEEEEEE
T ss_pred chh-hhhhcchhccccccCcCchhhhhhhhhhhcccCceEEEeecccccccCCEEEEEEECCCCCccccccccceeEEEE
Confidence 543 3456788876 999999998876554 445677788888999999999999999988876432 35678888
Q ss_pred EEeeccceeEEEEEEEeeccCCCCCCCCCCCCCcccCCCCCCCCccccccccCCCCCcEEEecCCCCCCCceeeeEEeeC
Q 014247 302 KSMMRAPLHGFAFWFDVEFSTPAISPANNHIPPVVVGSSNNHPMDGCQKKKRANPNEALVLSTAPEDPPTHWQQTMIYFY 381 (428)
Q Consensus 302 ~~~~~g~~~g~~~wf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lSt~P~~~~thW~q~~~~l~ 381 (428)
.+.++|.+|||++||++.|++. .++.++.|||+|..++|||+|++|+|+
T Consensus 279 ~~~~~g~vhg~~~WFd~~f~~~-------------------------------~~~~~v~lST~P~~~~THW~Q~v~~L~ 327 (376)
T 4hc4_A 279 SCYGSAPMHGFAIWFQVTFPGG-------------------------------ESEKPLVLSTSPFHPATHWKQALLYLN 327 (376)
T ss_dssp ECCSSEEEEEEEEEEEEEECCC-------------------------------C--CCEEEECCTTSCCCTTCEEEEEEE
T ss_pred EecCCcEEEEEEEEEEEEecCC-------------------------------CCCCceEEeCCCCcCCCceeeEEEEeC
Confidence 9999999999999999999641 124579999999999999999999999
Q ss_pred CccccCCCCEEEEEEEEEeCCCCCeeEEEEEEEEECCeE-eeeeccc
Q 014247 382 DPIEVEQDQLIEGSVVLSQSKENARFMNIHLEYASGGRS-FVKESVM 427 (428)
Q Consensus 382 ~pi~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~ 427 (428)
+|+.|++||+|+|+|+|+++++|+|.|+|+|+|..+++. ...++-|
T Consensus 328 ~Pi~V~~G~~I~g~i~~~~~~~n~R~~~i~i~~~~~~~~~~~~~~~~ 374 (376)
T 4hc4_A 328 EPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAM 374 (376)
T ss_dssp EEEEECTTCEEEEEEEEEECSSCTTSEEEEEEEEETTSCCEEEEEEE
T ss_pred CceEeCCCCEEEEEEEEEECCCCCceeEEEEEEEeCCCCcceEEEeC
Confidence 999999999999999999999999999999999987653 2344443
No 2
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=100.00 E-value=2.6e-51 Score=403.38 Aligned_cols=318 Identities=40% Similarity=0.720 Sum_probs=281.2
Q ss_pred hhhHHHhhhccchhhhhhccChhhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHHHHH
Q 014247 73 FDVAYFHSYAHVGIHEEMIKDRVRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQANE 152 (428)
Q Consensus 73 ~~~~~f~~y~~~~~~~~~~~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~a~~ 152 (428)
....||+.|+.+.+|+.|++|..|...|.++|.......++++|||||||+|.++..++++|+++|+|+|+|++++.|++
T Consensus 27 ~~~~yf~~y~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~ 106 (349)
T 3q7e_A 27 SKDYYFDSYAHFGIHEELLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVK 106 (349)
T ss_dssp ----------CCHHHHHHHHCHHHHHHHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHH
T ss_pred hHHHHHHhhhhhHHHHHHhccHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHH
Confidence 44679999999999999999999999999999887666789999999999999999999998889999999999999999
Q ss_pred HHHHCCCCCcEEEEEcccccccCC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccc
Q 014247 153 VVKANNLTDKVIVLHGRVEDVEID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDR 231 (428)
Q Consensus 153 ~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~ 231 (428)
+++.+++.++++++++|+++++++ ++||+|+++++++.+.++.++..++.++.++|||||++++...+.+..++.....
T Consensus 107 ~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~~~ 186 (349)
T 3q7e_A 107 IVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATLYVTAIEDRQY 186 (349)
T ss_dssp HHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHH
T ss_pred HHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccceEEEeeecChhh
Confidence 999999998999999999998876 8999999999888888889999999999999999999999999999999988877
Q ss_pred hhhhhhhhhccCCCCcchhHHHHHhcCCCCceEEeecCCccccCCeeEEEEeCCCCCcccccceeeeeEEEEeeccceeE
Q 014247 232 YSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVETITGENVLTWPHVVKHVDCYTIQIHELESIATTFKFKSMMRAPLHG 311 (428)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~~ls~p~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~g~~~g 311 (428)
......+|.+++|++++.+.+.. +..+.++.+.+..+++.++.+..+|+.+.+.+++. +...++|++.++|.+||
T Consensus 187 ~~~~~~~w~~~~G~d~~~~~~~~----~~~p~v~~~~~~~~~~~~~~~~~~dl~~~~~~~l~-~~~~~~~~~~~~~~~~g 261 (349)
T 3q7e_A 187 KDYKIHWWENVYGFDMSCIKDVA----IKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLT-FTSPFCLQVKRNDYVHA 261 (349)
T ss_dssp HHHHTGGGGCBTTBCCGGGHHHH----HTSCEEECCCGGGEEEEEEEEEEEETTTCCGGGGS-EEEEEEEEBCSSEEEEE
T ss_pred hhhhhcccccccCcchHHHhHhh----hcCcEEEEEChhhEecccEEEEEEEcccCchhhcc-eeeeEEEEEccCCEEEE
Confidence 77778899999999999987764 45678888899999999999999999999988885 67899999999999999
Q ss_pred EEEEEEeeccCCCCCCCCCCCCCcccCCCCCCCCccccccccCCCCCcEEEecCCCCCCCceeeeEEeeCCccccCCCCE
Q 014247 312 FAFWFDVEFSTPAISPANNHIPPVVVGSSNNHPMDGCQKKKRANPNEALVLSTAPEDPPTHWQQTMIYFYDPIEVEQDQL 391 (428)
Q Consensus 312 ~~~wf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lSt~P~~~~thW~q~~~~l~~pi~v~~g~~ 391 (428)
|++||++.|++ +..++.|||+|..+.|||+|++|+|++|+.|++|++
T Consensus 262 ~~~~Fd~~~~~---------------------------------~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~ 308 (349)
T 3q7e_A 262 LVAYFNIEFTR---------------------------------CHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEE 308 (349)
T ss_dssp EEEEEEEECTT---------------------------------SSSCCEEECSTTSCCCTTCEEEEEEEEEEEECTTCE
T ss_pred EEEEEEEEecC---------------------------------CCCccEEECCCCcCCCcceeEEEEECCceEeCCCCE
Confidence 99999999973 234799999999999999999999999999999999
Q ss_pred EEEEEEEEeCCCCCeeEEEEEEEEECCeE----eeeecccC
Q 014247 392 IEGSVVLSQSKENARFMNIHLEYASGGRS----FVKESVMR 428 (428)
Q Consensus 392 i~~~~~~~~~~~~~r~~~~~~~~~~~~~~----~~~~~~~~ 428 (428)
|+|+|++++++.|+|.|+|++++..+|+. ....|.||
T Consensus 309 i~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (349)
T 3q7e_A 309 IFGTIGMRPNAKNNRDLDFTIDLDFKGQLCELSCSTDYRMR 349 (349)
T ss_dssp EEEEEEEEECSSCSSCEEEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEEEEEECCCCCeeEEEEEEEEeCCcccccccCceEecC
Confidence 99999999999999999999999987763 23345665
No 3
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=100.00 E-value=8e-51 Score=396.66 Aligned_cols=308 Identities=43% Similarity=0.782 Sum_probs=278.9
Q ss_pred HHHhhhccchhhhhhccChhhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHHHHHHHH
Q 014247 76 AYFHSYAHVGIHEEMIKDRVRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQANEVVK 155 (428)
Q Consensus 76 ~~f~~y~~~~~~~~~~~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~a~~~~~ 155 (428)
.||+.|++.++|..|++|..|+..|.++|.+.+...++.+|||||||+|.++..++++|+.+|+|+|++++++.|++++.
T Consensus 2 ~Yf~~y~~~~~~~~ml~d~~r~~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~ 81 (328)
T 1g6q_1 2 YYFDSYDHYGIHEEMLQDTVRTLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVE 81 (328)
T ss_dssp CCCCCCCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHH
T ss_pred chhhhhcCchHHHHHhcCHHHHHHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHH
Confidence 48999999999999999999999999999877666788999999999999999999998889999999988999999999
Q ss_pred HCCCCCcEEEEEcccccccCC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhh
Q 014247 156 ANNLTDKVIVLHGRVEDVEID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSE 234 (428)
Q Consensus 156 ~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 234 (428)
.+++.++++++++|+.+++++ ++||+|+++++++.+.++..+..++.++.++|+|||+++|...++++.++........
T Consensus 82 ~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 161 (328)
T 1g6q_1 82 LNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPDKCSIHLAGLEDSQYKDE 161 (328)
T ss_dssp HTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHHHHH
T ss_pred HcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEeeceEEEEEecCchhhhh
Confidence 999988999999999998776 8999999998888888888899999999999999999999999999888887766666
Q ss_pred hhhhhhccCCCCcchhHHHHHhcCCCCceEEeecCCccccCCeeEEEEeCCCCCcccccceeeeeEEEEeeccceeEEEE
Q 014247 235 SIDFWRNVYGIDMSAMMPLAKQCAFEEPSVETITGENVLTWPHVVKHVDCYTIQIHELESIATTFKFKSMMRAPLHGFAF 314 (428)
Q Consensus 235 ~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~~ls~p~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~g~~~g~~~ 314 (428)
...+|.+.+|++++.+.+++. ..+.+..+.+..+++.|+.+..+|+.+...+++. +...++|.+.++|.+|||++
T Consensus 162 ~~~~w~~~~gf~~~~~~~~~~----~~~~v~~~~~~~~ls~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~ 236 (328)
T 1g6q_1 162 KLNYWQDVYGFDYSPFVPLVL----HEPIVDTVERNNVNTTSDKLIEFDLNTVKISDLA-FKSNFKLTAKRQDMINGIVT 236 (328)
T ss_dssp HHHHTTCBTTBCCTTHHHHHT----TSCEEECCCGGGBCBCCEEEEEEETTTCCGGGGS-EEEEEEEEBCSSCEEEEEEE
T ss_pred hhcccccccCcChHHHhhhhh----cCCeEEEeccceeecCCEEEEEEECCCCChhHhc-eeeeEEEEEecCcEEEEEEE
Confidence 778899999999999887763 4566778888899999999999999998887774 67889999999999999999
Q ss_pred EEEeeccCCCCCCCCCCCCCcccCCCCCCCCccccccccCCCCCcEEEecCCCCCCCceeeeEEeeCCccccCCCCEEEE
Q 014247 315 WFDVEFSTPAISPANNHIPPVVVGSSNNHPMDGCQKKKRANPNEALVLSTAPEDPPTHWQQTMIYFYDPIEVEQDQLIEG 394 (428)
Q Consensus 315 wf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lSt~P~~~~thW~q~~~~l~~pi~v~~g~~i~~ 394 (428)
||+++|+++ .+.+++.+||+|..+.|||+|++|+|++|+.|++|++|+|
T Consensus 237 wfd~~~~~~-------------------------------~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~ 285 (328)
T 1g6q_1 237 WFDIVFPAP-------------------------------KGKRPVEFSTGPHAPYTHWKQTIFYFPDDLDAETGDTIEG 285 (328)
T ss_dssp EEEEECCCC-------------------------------TTSCCCEEECSTTSCCCTTCEEEEEEEEEEECCTTCEEEE
T ss_pred EEEEEcCCC-------------------------------CCCCceEEECCCCcCCCcceeEEEEeCCceecCCCCEEEE
Confidence 999999741 1235799999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCeeEEEEEEEEECCe
Q 014247 395 SVVLSQSKENARFMNIHLEYASGGR 419 (428)
Q Consensus 395 ~~~~~~~~~~~r~~~~~~~~~~~~~ 419 (428)
++++++++.|+|.|+|++++..+|.
T Consensus 286 ~~~~~~~~~~~r~~~~~~~~~~~~~ 310 (328)
T 1g6q_1 286 ELVCSPNEKNNRDLNIKISYKFESN 310 (328)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECC
T ss_pred EEEEEECCCCCceEEEEEEEEecCc
Confidence 9999999999999999999998763
No 4
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=100.00 E-value=9.8e-50 Score=390.63 Aligned_cols=315 Identities=40% Similarity=0.740 Sum_probs=278.0
Q ss_pred CCchhhHHHhhhccchhhhhhccChhhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHH
Q 014247 70 CTDFDVAYFHSYAHVGIHEEMIKDRVRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQ 149 (428)
Q Consensus 70 ~~~~~~~~f~~y~~~~~~~~~~~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~ 149 (428)
....+..||+.|...++|..|++|..|+..|.++|.+.+...++.+|||||||+|.++..+++.|+.+|+|+|++++++.
T Consensus 22 ~~~~d~~Y~~~y~~~~~~~~ml~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~ 101 (340)
T 2fyt_A 22 QEDEDGVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQ 101 (340)
T ss_dssp --------CCGGGSHHHHHHHHTCHHHHHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHH
T ss_pred CccchhhHHHhhcchhHHHHHhcCHHHHHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHH
Confidence 34456679999999999999999999999999999998877889999999999999999999998889999999988999
Q ss_pred HHHHHHHCCCCCcEEEEEcccccccCC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCC
Q 014247 150 ANEVVKANNLTDKVIVLHGRVEDVEID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTH 228 (428)
Q Consensus 150 a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~ 228 (428)
|+++++.+++.++++++++|+.+++++ ++||+|+++++++.+.++.++..++.++.++|||||+++|...+.++.++..
T Consensus 102 a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~ 181 (340)
T 2fyt_A 102 AMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVAVSD 181 (340)
T ss_dssp HHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESCEEEEEEEEECC
T ss_pred HHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcccceEEEEEecc
Confidence 999999999988899999999998876 8999999998888888888899999999999999999999999999988887
Q ss_pred ccchhhhhhhhhccCCCCcchhHHHHHhcCCCCceEEeecCCccccCCeeEEEEeCCCCCcccccceeeeeEEEEeeccc
Q 014247 229 PDRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVETITGENVLTWPHVVKHVDCYTIQIHELESIATTFKFKSMMRAP 308 (428)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~~ls~p~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~g~ 308 (428)
.........+|.+.+|++++.+.+.+ +..+.++.+.+..+++.|..+..+|+.+...+++ .+...+.+.+.++|.
T Consensus 182 ~~~~~~~~~~w~~~~g~~~~~~~~~~----~~~~~v~~~~~~~~ls~p~~~~~~d~~~~~~~~~-~~~~~~~~~~~~~~~ 256 (340)
T 2fyt_A 182 VNKHADRIAFWDDVYGFKMSCMKKAV----IPEAVVEVLDPKTLISEPCGIKHIDCHTTSISDL-EFSSDFTLKITRTSM 256 (340)
T ss_dssp HHHHHHHTGGGGCBTTBCCGGGHHHH----TTBCEEECCCGGGBCBCCEEEEEEETTTCCGGGG-SEEEEEEEEBCSCEE
T ss_pred hhHhhhhhcccccccCcChHHHHHhh----hcCcEEEEechhhcccCCEEEEEEECCCCccccc-ceEeeEEEEEccCcE
Confidence 77767777899999999999887754 5667777778888999999999999999887776 467789999999999
Q ss_pred eeEEEEEEEeeccCCCCCCCCCCCCCcccCCCCCCCCccccccccCCCCCcEEEecCCCCCCCceeeeEEeeCCccccCC
Q 014247 309 LHGFAFWFDVEFSTPAISPANNHIPPVVVGSSNNHPMDGCQKKKRANPNEALVLSTAPEDPPTHWQQTMIYFYDPIEVEQ 388 (428)
Q Consensus 309 ~~g~~~wf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lSt~P~~~~thW~q~~~~l~~pi~v~~ 388 (428)
+|||++||++.|+. ++.+++.|||+|..+.|||+|++|+|++|+.|++
T Consensus 257 ~~g~~~wfd~~~~~--------------------------------~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~ 304 (340)
T 2fyt_A 257 CTAIAGYFDIYFEK--------------------------------NCHNRVVFSTGPQSTKTHWKQTVFLLEKPFSVKA 304 (340)
T ss_dssp EEEEEEEEEEEECT--------------------------------TCSSCEEEECSTTSCCCTTCEEEEEEEEEEEECT
T ss_pred EEEEEEEEEEEeec--------------------------------CCCCCEEEECCCCcCCCccccEEEEeCCceEcCC
Confidence 99999999999941 2245799999999999999999999999999999
Q ss_pred CCEEEEEEEEEeCCCCCeeEEEEEEEEECCeEe
Q 014247 389 DQLIEGSVVLSQSKENARFMNIHLEYASGGRSF 421 (428)
Q Consensus 389 g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 421 (428)
|++|+|++++++++.|.|.|+|++++...+|.|
T Consensus 305 g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 337 (340)
T 2fyt_A 305 GEALKGKVTVHKNKKDPRSLTVTLTLNNSTQTY 337 (340)
T ss_dssp TCEEEEEEEEEECSSCTTSEEEEEEETTEEEEE
T ss_pred CCEEEEEEEEEECCCCCceEEEEEEEEcceEEE
Confidence 999999999999999999999999987544443
No 5
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=100.00 E-value=7e-50 Score=396.90 Aligned_cols=320 Identities=39% Similarity=0.659 Sum_probs=282.7
Q ss_pred hhhHHHhhhccchhhhhhccChhhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHHHHH
Q 014247 73 FDVAYFHSYAHVGIHEEMIKDRVRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQANE 152 (428)
Q Consensus 73 ~~~~~f~~y~~~~~~~~~~~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~a~~ 152 (428)
....||+.|+....|..|++|..|+..|.++|.......++++|||||||+|.+++.++++|+++|+|+|+|+|++.|++
T Consensus 24 ~~~~yf~~ya~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~ 103 (376)
T 3r0q_C 24 DYAQYFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARA 103 (376)
T ss_dssp ----CTTGGGCHHHHHHHHTCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHH
T ss_pred cHHHHHHHHHHhHHHHHHhcChHHHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHH
Confidence 44678999999999999999999999999999998888899999999999999999999998889999999999999999
Q ss_pred HHHHCCCCCcEEEEEcccccccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccch
Q 014247 153 VVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRY 232 (428)
Q Consensus 153 ~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~ 232 (428)
+++.+++.++++++++|+++++++++||+|+++++++++.++.++..+++++.++|+|||+++++....+..++......
T Consensus 104 ~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 183 (376)
T 3r0q_C 104 LVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIAD 183 (376)
T ss_dssp HHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTHHH
T ss_pred HHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchHHh
Confidence 99999999899999999999888899999999998888888888999999999999999999999999999998776443
Q ss_pred hhhh----------hhh---hccCCCCcchhHHHHHhc----CCCCceEEeecCCccccCCeeEEEEeCCCCCcccccce
Q 014247 233 SESI----------DFW---RNVYGIDMSAMMPLAKQC----AFEEPSVETITGENVLTWPHVVKHVDCYTIQIHELESI 295 (428)
Q Consensus 233 ~~~~----------~~~---~~~~~~~~~~l~~~l~~~----Gf~~~~~~~~~~~~~ls~p~~~~~~d~~~~~~~~l~~~ 295 (428)
.... .+| ...+|++++.+.+.+... .+..+.++.+.+..+++.|+.+..+|+.++..+++..+
T Consensus 184 ~~~~~~~~~~~~W~~fw~~~~~~~G~d~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~lt~~~~~~~~d~~~~~~~~l~~~ 263 (376)
T 3r0q_C 184 RKRNDFDGAMADWHNFSDEIKSYYGVDMGVLTKPFAEEQEKYYIQTAMWNDLNPQQIIGTPTIVKEMDCLTASVSEIEEV 263 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCCCGGGHHHHHHHHHHHHTSBCEEECCCGGGBCBCCEEEEEEETTTCCGGGTSEE
T ss_pred hhhhhhhhhhhhhhhhhhccCccccCChHHHHhhhhhhhhhhcccCceEEEEChHHccCCCeEEEEEEcCcCCHHHhccc
Confidence 3332 678 779999999998874332 45788888899999999999999999999999998878
Q ss_pred eeeeEEEE-eeccceeEEEEEEEeeccCCCCCCCCCCCCCcccCCCCCCCCccccccccCCCCCcEEEecCCC-CCCCce
Q 014247 296 ATTFKFKS-MMRAPLHGFAFWFDVEFSTPAISPANNHIPPVVVGSSNNHPMDGCQKKKRANPNEALVLSTAPE-DPPTHW 373 (428)
Q Consensus 296 ~~~~~~~~-~~~g~~~g~~~wf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lSt~P~-~~~thW 373 (428)
...++|.+ .++|.+|||++||+++|++... ......+.|||+|. .+.|||
T Consensus 264 ~~~~~~~~~~~~~~~~g~~~wfd~~~~~~~~----------------------------~~~~~~v~lSt~P~~~~~thW 315 (376)
T 3r0q_C 264 RSNVTSVINMEHTRLCGFGGWFDVQFSGRKE----------------------------DPAQQEIELTTAPSEQHCTHW 315 (376)
T ss_dssp EEEEEEBCSCSCEEEEEEEEEEEEEEEEETT----------------------------EEEEEEEEEECCCCSSCCCTT
T ss_pred ccceEEEEeccCceEEEEEEEEEEEecCCcc----------------------------CCCCCccEEECCCCcCCCCce
Confidence 88999998 8999999999999999974100 00124699999999 468999
Q ss_pred eeeEEeeCCccccCCCCEEEEEEEEEeCCCCCeeEEEEEEEEECCeE
Q 014247 374 QQTMIYFYDPIEVEQDQLIEGSVVLSQSKENARFMNIHLEYASGGRS 420 (428)
Q Consensus 374 ~q~~~~l~~pi~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 420 (428)
||++|+|++|+.|++||+|+|+|+|+++++|+|.|+|+|++..+++.
T Consensus 316 ~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 362 (376)
T 3r0q_C 316 GQQVFIMSNPINVEEGDNLNLGLLMSRSKENHRLMEIELNCEIKEAS 362 (376)
T ss_dssp CEEEEEEEEEEEECTTCEEEEEEEEEECSSCTTSEEEEEEEEEECSS
T ss_pred eeEEEEECCceecCCCCEEEEEEEEEECCCCCeeEEEEEEEEecCcC
Confidence 99999999999999999999999999999999999999999987654
No 6
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=100.00 E-value=1.6e-45 Score=362.14 Aligned_cols=309 Identities=38% Similarity=0.635 Sum_probs=263.3
Q ss_pred hhhHHHhhhccchhhhhhccChhhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHHHHH
Q 014247 73 FDVAYFHSYAHVGIHEEMIKDRVRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQANE 152 (428)
Q Consensus 73 ~~~~~f~~y~~~~~~~~~~~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~a~~ 152 (428)
....||+.|..+..|..|++|..|+..|.++|.+.+...++.+|||||||+|.++..++++|+.+|+|+|+|+++..|++
T Consensus 11 ~~~~y~~~y~~~~~~~~ml~d~~r~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~ 90 (348)
T 2y1w_A 11 SAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEV 90 (348)
T ss_dssp HHHHHHHHHTCHHHHHHHHTCHHHHHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHH
T ss_pred cHHHHHHHHhhhhHHHHHhcchHHHHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHH
Confidence 34679999999999999999999999999999998887889999999999999999999998889999999988899999
Q ss_pred HHHHCCCCCcEEEEEcccccccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccch
Q 014247 153 VVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRY 232 (428)
Q Consensus 153 ~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~ 232 (428)
+++.+++.++++++.+|+++++++++||+|+++.+++.+..+. ....+..+.++|||||+++++.++.+..++.....+
T Consensus 91 ~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~~~~~~~-~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~~ 169 (348)
T 2y1w_A 91 LVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNER-MLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLY 169 (348)
T ss_dssp HHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBTTBTTTS-HHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHH
T ss_pred HHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchhcCChHH-HHHHHHHHHhhcCCCeEEEEecCcEEEEEecchHHh
Confidence 9999999888999999999988778999999988665554444 556667889999999999999999998888776655
Q ss_pred hh---hhhhhh--ccCCCCcchhHHHHHhcCCCCceEEeecCCccccCCeeEEEEeCCCCCcccccceeeeeEEEEeecc
Q 014247 233 SE---SIDFWR--NVYGIDMSAMMPLAKQCAFEEPSVETITGENVLTWPHVVKHVDCYTIQIHELESIATTFKFKSMMRA 307 (428)
Q Consensus 233 ~~---~~~~~~--~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~~ls~p~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~g 307 (428)
.+ ...+|. ..+|++++.+..++.+.+|..+.++..... +...+.....+|+.....+++.++...++|.+.++|
T Consensus 170 ~~~~~~~~~w~~~~~~g~d~~~l~~~~~~~~f~~p~~d~~~~~-~~~~~~~~~~~df~~~~~~~~~~~~~~~~~~~~~~g 248 (348)
T 2y1w_A 170 MEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIR-ILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSG 248 (348)
T ss_dssp HHHHHHHGGGCCSCBTTBCCGGGHHHHHHHHHTSCEEECCCGG-GBCBCCEEEEEETTTCCGGGGSEEEEEEEEEBSSCE
T ss_pred hhhccccCcccccccCcccHHHhhhHHHhhhccCCeEEeECCe-eecCcceEEEEECCcCChHHhceeeeeEEEEEccCc
Confidence 33 245663 578999999999998899998877755443 334444567789998888888777788999999999
Q ss_pred ceeEEEEEEEeeccCCCCCCCCCCCCCcccCCCCCCCCccccccccCCCCCcEEEecCCCCCCCceeeeEEeeCCccccC
Q 014247 308 PLHGFAFWFDVEFSTPAISPANNHIPPVVVGSSNNHPMDGCQKKKRANPNEALVLSTAPEDPPTHWQQTMIYFYDPIEVE 387 (428)
Q Consensus 308 ~~~g~~~wf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lSt~P~~~~thW~q~~~~l~~pi~v~ 387 (428)
.+|||++||+++|++ +..++.|||+|..+.|||+|++|+|++|+.|+
T Consensus 249 ~~~g~~~wfd~~~~~---------------------------------~~~~v~lSt~P~~~~thW~q~~~~l~~p~~v~ 295 (348)
T 2y1w_A 249 LVHGLAFWFDVAFIG---------------------------------SIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAK 295 (348)
T ss_dssp EEEEEEEEEEEEEEC---------------------------------SSCEEEEECCTTSCCCTTCEEEEEEEEEEEEC
T ss_pred EEEEEEEEEEEEEcC---------------------------------CCCceEEECCCCcCCCeeeeEEEeeCCceEeC
Confidence 999999999999974 12478999999989999999999999999999
Q ss_pred CCCEEEEEEEEEeCCCCCeeEEEEEEEEE
Q 014247 388 QDQLIEGSVVLSQSKENARFMNIHLEYAS 416 (428)
Q Consensus 388 ~g~~i~~~~~~~~~~~~~r~~~~~~~~~~ 416 (428)
+||+|+|+|++++++.+.|.+.|++++..
T Consensus 296 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~ 324 (348)
T 2y1w_A 296 AGDTLSGTCLLIANKRQSYDISIVAQVDQ 324 (348)
T ss_dssp TTCEEEEEEEEEECTTSSEEEEEEEEETT
T ss_pred CCCEEEEEEEEEECCCCCcEEEEEEEEcc
Confidence 99999999999999877666666665543
No 7
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=100.00 E-value=3.4e-43 Score=363.36 Aligned_cols=282 Identities=21% Similarity=0.266 Sum_probs=243.7
Q ss_pred hhhhhhccChhhHHHHHHHHHhcc--------CCCCCCEEEEEcCCCcHHHHHHHHcCC---C--eEEEEeChHHHHHHH
Q 014247 85 GIHEEMIKDRVRTETYRAAIMQNQ--------SFIEGKVVVDVGCGTGILSIFCAQAGA---K--RVYAVDASDIAVQAN 151 (428)
Q Consensus 85 ~~~~~~~~d~~r~~~~~~~i~~~~--------~~~~~~~VLDiGcGtG~ls~~la~~g~---~--~V~giD~s~~~~~a~ 151 (428)
..|+.+.+|..++..|.++|.+++ ...++.+|||||||+|.|+..++++++ . +|+|||.|+++..|+
T Consensus 322 ~tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~ 401 (637)
T 4gqb_A 322 QTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTL 401 (637)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHH
T ss_pred hhhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH
Confidence 467888999999999999998754 223456899999999999766666543 3 789999999999999
Q ss_pred HHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccc
Q 014247 152 EVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDR 231 (428)
Q Consensus 152 ~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~ 231 (428)
+.++.|++.++|+++++|++++.+++++|+||||+||+++.+|..+ +++.+..++|||||+++|+.+++|++|++....
T Consensus 402 ~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~ml-evL~Ardr~LKPgGimiPs~atlyiapi~~~~l 480 (637)
T 4gqb_A 402 ENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSP-ECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKL 480 (637)
T ss_dssp HHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHH-HHHHHHGGGEEEEEEEESCEEEEEEEEEECHHH
T ss_pred HHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCH-HHHHHHHHhcCCCcEEccccceEEEEEecCHHH
Confidence 9999999999999999999999999999999999999999999976 789999999999999999999999999999999
Q ss_pred hhhhhhhhhccCCCCcchhHHHHHhcCCCCceEEeecCCccccCCeeEEEEeCCCCCcccccceeeeeEEEEeeccceeE
Q 014247 232 YSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVETITGENVLTWPHVVKHVDCYTIQIHELESIATTFKFKSMMRAPLHG 311 (428)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~~ls~p~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~g~~~g 311 (428)
|.+...+|...++++. .|+.+.+........++.|+.+.+||+.+....+...+...++|++.++|.+||
T Consensus 481 ~~e~~~~~~~~~~~~~----------~~~~p~Vv~~~~~~~Ls~p~~~~~fd~~~~~~~~~~~~~~~~~f~i~~~g~vhG 550 (637)
T 4gqb_A 481 YNEVRACREKDRDPEA----------QFEMPYVVRLHNFHQLSAPQPCFTFSHPNRDPMIDNNRYCTLEFPVEVNTVLHG 550 (637)
T ss_dssp HHHHHTTCCTTSCTTG----------GGGSCEECBCCSCEECSCCEEEEEEESSCCSTTCCCCEEEEEEEECCSCEEEEE
T ss_pred HHHHHhcccccccchh----------hcCCcEEEEecCccccCCCEEEEEEECCCCCccccceEEEEEEEEecCCcEEEE
Confidence 8888888877666543 356677777788889999999999999877665555667889999999999999
Q ss_pred EEEEEEeeccCCCCCCCCCCCCCcccCCCCCCCCccccccccCCCCCcEEEecCCCC---CCCceeeeEEeeCCccccCC
Q 014247 312 FAFWFDVEFSTPAISPANNHIPPVVVGSSNNHPMDGCQKKKRANPNEALVLSTAPED---PPTHWQQTMIYFYDPIEVEQ 388 (428)
Q Consensus 312 ~~~wf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lSt~P~~---~~thW~q~~~~l~~pi~v~~ 388 (428)
|++||+++|++ ++.|||+|.. +.|||+|++|+|++|+.|++
T Consensus 551 f~~wFD~~f~~------------------------------------~V~LST~P~~~s~~~THW~Q~vfpL~~Pl~V~~ 594 (637)
T 4gqb_A 551 FAGYFETVLYQ------------------------------------DITLSIRPETHSPGMFSWFPILFPIKQPITVRE 594 (637)
T ss_dssp EEEEEEEEEET------------------------------------TEEEECSGGGCCTTCCSCCCEEEEEEEEEEECT
T ss_pred EEEEEEEEeeC------------------------------------CeEEECCCCCCCCCCCcccCeEEEeCCCeEECC
Confidence 99999999974 6999999963 45999999999999999999
Q ss_pred CCEEEEEEEEEeCCCCCeeEEEEEEE
Q 014247 389 DQLIEGSVVLSQSKENARFMNIHLEY 414 (428)
Q Consensus 389 g~~i~~~~~~~~~~~~~r~~~~~~~~ 414 (428)
||+|+++++++.+. ..-+|++.++-
T Consensus 595 Gd~I~~~~~R~~d~-~kVWYEW~v~~ 619 (637)
T 4gqb_A 595 GQTICVRFWRCSNS-KKVWYEWAVTA 619 (637)
T ss_dssp TCEEEEEEEEEECS-SEEEEEEEEEE
T ss_pred CCEEEEEEEEEeCC-CceeEEEEEeC
Confidence 99999999988753 34567776663
No 8
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=100.00 E-value=7.7e-42 Score=347.99 Aligned_cols=305 Identities=38% Similarity=0.639 Sum_probs=255.0
Q ss_pred HHHhhhccchhhhhhccChhhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHHHHHHHH
Q 014247 76 AYFHSYAHVGIHEEMIKDRVRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQANEVVK 155 (428)
Q Consensus 76 ~~f~~y~~~~~~~~~~~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~a~~~~~ 155 (428)
.|++.|.....+..|+.+..+++.|.+++.+.+...++.+|||||||+|.+++.+++.+..+|+|+|+|++++.|++++.
T Consensus 122 ~~~~~y~~~~~~~~~L~d~~~t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~ 201 (480)
T 3b3j_A 122 QYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVK 201 (480)
T ss_dssp EEEEGGGCSCHHHHHHHHHHHHHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHH
T ss_pred hHHHHHhhhccchhhhcChHhHHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHH
Confidence 34555666556888999999999999999988877788999999999999999999988789999999998899999999
Q ss_pred HCCCCCcEEEEEcccccccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhh-
Q 014247 156 ANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSE- 234 (428)
Q Consensus 156 ~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~- 234 (428)
.+++.++++++++|+.+++++++||+|+++.+++.+..+. ....+..+.++|+|||.+++..++.+..++.....+.+
T Consensus 202 ~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~~~~~e~-~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~~e~ 280 (480)
T 3b3j_A 202 SNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNER-MLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQ 280 (480)
T ss_dssp HTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHHHHTCHH-HHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHH
T ss_pred HcCCCCcEEEEECchhhCccCCCeEEEEEeCchHhcCcHH-HHHHHHHHHHhcCCCCEEEEEeceeeeeccCchHHHHHH
Confidence 9999888999999999987778999999998776666555 44556688899999999999999999888887665532
Q ss_pred --hhhhhh--ccCCCCcchhHHHHHhcCCCCceEEeecCCccccCCeeEEEEeCCCCCcccccceeeeeEEEEeecccee
Q 014247 235 --SIDFWR--NVYGIDMSAMMPLAKQCAFEEPSVETITGENVLTWPHVVKHVDCYTIQIHELESIATTFKFKSMMRAPLH 310 (428)
Q Consensus 235 --~~~~~~--~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~~ls~p~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~g~~~ 310 (428)
...+|. ..+|++++.+...+.+.+|..+.++.......... .....+|+.+...+++.++...++|.+.++|.+|
T Consensus 281 ~~~~~~w~~~~~~g~dl~~l~~~~~~~~f~~pvvd~~~~~~~y~~-tl~~~~d~~~~~~~~l~~~~~~~~~~~~~~g~~h 359 (480)
T 3b3j_A 281 FTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAK-SVKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVH 359 (480)
T ss_dssp HHHHHHHHSSCBTTBCCGGGHHHHHHHHTTSCEECCCCSTTBCSC-CEEEEEETTTCCTTTTTEEEEEEEEECSSCEEEE
T ss_pred hhccCccccccCCCcChhhhhhHHHHhccCCcEEEEeecccccch-hhhhhhhhhcCChhhhcceeeeEEEEEccCcEEE
Confidence 235664 57899999999888888898877665554443444 3456899998888888777788999999999999
Q ss_pred EEEEEEEeeccCCCCCCCCCCCCCcccCCCCCCCCccccccccCCCCCcEEEecCCCCCCCceeeeEEeeCCccccCCCC
Q 014247 311 GFAFWFDVEFSTPAISPANNHIPPVVVGSSNNHPMDGCQKKKRANPNEALVLSTAPEDPPTHWQQTMIYFYDPIEVEQDQ 390 (428)
Q Consensus 311 g~~~wf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lSt~P~~~~thW~q~~~~l~~pi~v~~g~ 390 (428)
||++||+++|++ +..++.|||+|..+.|||+|++|+|++|+.|++||
T Consensus 360 g~~~wFd~~~~~---------------------------------~~~~v~lST~P~~~~thW~q~~~~l~~p~~v~~g~ 406 (480)
T 3b3j_A 360 GLAFWFDVAFIG---------------------------------SIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGD 406 (480)
T ss_dssp EEEEEEEEEEEC---------------------------------SSCEEESSSCCSSSCCCSEEEEEEEEEEEEECTTC
T ss_pred EEEEEEEEEEcC---------------------------------CCCceEEeCCCCcCCCeeeeEEEEeCCceEeCCCC
Confidence 999999999973 12478999999989999999999999999999999
Q ss_pred EEEEEEEEEeCCCCCeeEEEEEEEE
Q 014247 391 LIEGSVVLSQSKENARFMNIHLEYA 415 (428)
Q Consensus 391 ~i~~~~~~~~~~~~~r~~~~~~~~~ 415 (428)
+|+|++.+++++.+.|.+.+++.+.
T Consensus 407 ~i~g~~~~~~~~~~~~~v~~~~~~~ 431 (480)
T 3b3j_A 407 TLSGTCLLIANKRQSYDISIVAQVD 431 (480)
T ss_dssp EEEEEEEEEECTTSSEEEEEEEEET
T ss_pred EEEEEEEEEECCCCCcEEEEEEEEc
Confidence 9999999999987766555555543
No 9
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=100.00 E-value=3e-40 Score=339.11 Aligned_cols=293 Identities=16% Similarity=0.199 Sum_probs=239.7
Q ss_pred chhhhhhccChhhHHHHHHHHHhccCCC-----CCCEEEEEcCCCcHHHHHHHHc----C----------CCeEEEEeCh
Q 014247 84 VGIHEEMIKDRVRTETYRAAIMQNQSFI-----EGKVVVDVGCGTGILSIFCAQA----G----------AKRVYAVDAS 144 (428)
Q Consensus 84 ~~~~~~~~~d~~r~~~~~~~i~~~~~~~-----~~~~VLDiGcGtG~ls~~la~~----g----------~~~V~giD~s 144 (428)
...|+.|++|..|+..|+++|..++... ++++|||||||+|.|+..++++ + +.+|+|||.|
T Consensus 376 s~tYe~fekD~vRy~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEkn 455 (745)
T 3ua3_A 376 SGVYNTFEQDQIKYDVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKN 455 (745)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECC
T ss_pred hHHHHHHcCChhhHHHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCC
Confidence 3478999999999999999999885322 2468999999999997654333 2 2399999999
Q ss_pred HHHHHHHHHHHHCCCCCcEEEEEcccccccC------CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 145 DIAVQANEVVKANNLTDKVIVLHGRVEDVEI------DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 145 ~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~------~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+++..+.+....|++.++|+++++|++++.+ ++++|+|||++||+++.++. .+++|..+.++|||||+++|+.
T Consensus 456 p~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL-~pe~Ld~v~r~Lkp~Gi~iP~~ 534 (745)
T 3ua3_A 456 PNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNEL-SPECLDGVTGFLKPTTISIPQK 534 (745)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGS-HHHHHHTTGGGSCTTCEEESCE
T ss_pred hHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhc-cHHHHHHHHHhCCCCcEEECCc
Confidence 6555555555569999999999999999987 68999999999999998886 5668888899999999999999
Q ss_pred CeeeEeecCCccchhhhhhhhhc--cCCCCcch------------h---HHHHHhcCCCCceEEeecCCccccC-CeeEE
Q 014247 219 ATLYMAPVTHPDRYSESIDFWRN--VYGIDMSA------------M---MPLAKQCAFEEPSVETITGENVLTW-PHVVK 280 (428)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------------l---~~~l~~~Gf~~~~~~~~~~~~~ls~-p~~~~ 280 (428)
++.|++|+..+.+|.+...++.. ++||+... + -.......|+.+.+..+....+++. |+.++
T Consensus 535 ~t~ylaPi~~~~l~~~v~~~~~~~~~~G~p~~g~~~P~~~~~g~~i~~~~~~~~~~a~e~PyVv~l~~~~~Ls~~pq~vf 614 (745)
T 3ua3_A 535 YTSYVKPIMSTHIHQTIKAQSIPYLSRAIPSHGRGEPELDEDEMWIQKYPQGHVRNNMDQIYVVYLSKYIPLAETTKPVF 614 (745)
T ss_dssp EEEEEEEEECHHHHHHHHTCCCCGGGTTSCCSSSCCCEECTTSCEECCCTTCHHHHHHSSCEEECCCSCEESSSSCEEEE
T ss_pred cEEEEEEecCHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccEEEeeccceecCCCCceEE
Confidence 99999999999888776655432 34442100 0 0011334578999999999999999 99999
Q ss_pred EEeCCCCCcccccceeeeeEEEEeeccceeEEEEEEEeeccCCCCCCCCCCCCCcccCCCCCCCCccccccccCCCCCcE
Q 014247 281 HVDCYTIQIHELESIATTFKFKSMMRAPLHGFAFWFDVEFSTPAISPANNHIPPVVVGSSNNHPMDGCQKKKRANPNEAL 360 (428)
Q Consensus 281 ~~d~~~~~~~~l~~~~~~~~~~~~~~g~~~g~~~wf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (428)
+||+.+...++. .+...++|.+.++|.+|||++||++.|++ +|
T Consensus 615 tFdhp~~~~~d~-~r~~~~~F~~~r~g~iHGfagwFDi~Lyk------------------------------------~V 657 (745)
T 3ua3_A 615 TFEHPNFMNSSN-ERSDSIEFVMDRNADLMGFAGYFDLQLYK------------------------------------TV 657 (745)
T ss_dssp EEESSCTTCCCS-CEEEEEEEECCSSEEEEEEEEEEEEEEET------------------------------------TE
T ss_pred EEECCCCCcccc-ceeEEEEEEeCCCcEEEEEEEEEEEEecC------------------------------------Cc
Confidence 999998776555 46889999999999999999999999974 69
Q ss_pred EEecCCCCC---CCceeeeEEeeCCccccCCCCEEEEEEEEEeCCCCCeeEEEEEEEE
Q 014247 361 VLSTAPEDP---PTHWQQTMIYFYDPIEVEQDQLIEGSVVLSQSKENARFMNIHLEYA 415 (428)
Q Consensus 361 ~lSt~P~~~---~thW~q~~~~l~~pi~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~ 415 (428)
.|||+|... .|||||++|+|++|+.|++||+|+++++...+ +..-+|+..+++.
T Consensus 658 ~LST~P~t~s~~mThWfQtfFPL~ePL~V~~GdeI~g~~~R~~d-~~kVWYEW~v~~~ 714 (745)
T 3ua3_A 658 MLSIEPSTHTPGMVSWFPAVIPLRDQLRVGEGDRISLKIDRKVD-NTGVWYEWHVEKK 714 (745)
T ss_dssp EEECSSTTCCTTCCSCCCEEEEEEEEEEECTTCEEEEEEEEEEE-TTEEEEEEEEEEE
T ss_pred EEecCCCCCCCCCccceeEEEecCCceEeCCCCEEEEEEEEEcC-CCCEEEEEEEEec
Confidence 999999864 58999999999999999999999999999876 3567777777644
No 10
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.77 E-value=5.1e-18 Score=159.75 Aligned_cols=161 Identities=20% Similarity=0.315 Sum_probs=125.3
Q ss_pred HHHHHHHhccC-CCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 99 TYRAAIMQNQS-FIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 99 ~~~~~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
.....+...+. ..++.+|||||||+|.++..+++.+..+|+|+|+| .+++.|++++...++.++++++++|+.+++++
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 111 (267)
T 3kkz_A 32 EVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFR 111 (267)
T ss_dssp HHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCC
Confidence 33444445544 56789999999999999999999866699999999 99999999999999988899999999998764
Q ss_pred -CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccC--CCCcchhHHH
Q 014247 177 -EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVY--GIDMSAMMPL 253 (428)
Q Consensus 177 -~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~ 253 (428)
++||+|++.. .+.+. ++..+++++.++|||||.+++...... ..........+|...+ ..+...+..+
T Consensus 112 ~~~fD~i~~~~---~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (267)
T 3kkz_A 112 NEELDLIWSEG---AIYNI-GFERGLNEWRKYLKKGGYLAVSECSWF-----TDERPAEINDFWMDAYPEIDTIPNQVAK 182 (267)
T ss_dssp TTCEEEEEESS---CGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEES-----SSCCCHHHHHHHHHHCTTCEEHHHHHHH
T ss_pred CCCEEEEEEcC---Cceec-CHHHHHHHHHHHcCCCCEEEEEEeeec-----CCCChHHHHHHHHHhCCCCCCHHHHHHH
Confidence 8899999976 44444 588999999999999999998765421 1112223344553322 2356788999
Q ss_pred HHhcCCCCceEEeec
Q 014247 254 AKQCAFEEPSVETIT 268 (428)
Q Consensus 254 l~~~Gf~~~~~~~~~ 268 (428)
++++||+.+.+..++
T Consensus 183 l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 183 IHKAGYLPVATFILP 197 (267)
T ss_dssp HHHTTEEEEEEEECC
T ss_pred HHHCCCEEEEEEECC
Confidence 999999988777654
No 11
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.76 E-value=1.1e-17 Score=156.20 Aligned_cols=161 Identities=14% Similarity=0.115 Sum_probs=123.4
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE 177 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~ 177 (428)
...+.+...+...++.+|||||||+|.++..+++....+|+|+|+| .+++.|++++...++.++++++++|+.+++.++
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 102 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANE 102 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSS
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCC
Confidence 4455666666778899999999999999999998733389999999 999999999999998878999999999987778
Q ss_pred ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhh---ccCCCCcchhHHHH
Q 014247 178 EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWR---NVYGIDMSAMMPLA 254 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~l 254 (428)
+||+|++.. .+++..++..+++++.++|||||.+++........ .........|. ....++...+..++
T Consensus 103 ~fD~V~~~~---~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l 174 (256)
T 1nkv_A 103 KCDVAACVG---ATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQL-----PATEEIAQACGVSSTSDFLTLPGLVGAF 174 (256)
T ss_dssp CEEEEEEES---CGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTC-----CSSHHHHHTTTCSCGGGSCCHHHHHHHH
T ss_pred CCCEEEECC---ChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCC-----CChHHHHHHHhcccccccCCHHHHHHHH
Confidence 999999965 45556678999999999999999999865432110 10111111222 11335678899999
Q ss_pred HhcCCCCceEEee
Q 014247 255 KQCAFEEPSVETI 267 (428)
Q Consensus 255 ~~~Gf~~~~~~~~ 267 (428)
+++||+.+.+...
T Consensus 175 ~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 175 DDLGYDVVEMVLA 187 (256)
T ss_dssp HTTTBCCCEEEEC
T ss_pred HHCCCeeEEEEeC
Confidence 9999998876543
No 12
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.75 E-value=1.2e-17 Score=156.05 Aligned_cols=159 Identities=22% Similarity=0.355 Sum_probs=123.3
Q ss_pred HHHHHhcc-CCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-C
Q 014247 101 RAAIMQNQ-SFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-E 177 (428)
Q Consensus 101 ~~~i~~~~-~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~ 177 (428)
...+...+ ...++.+|||||||+|.++..+++.+..+|+|+|+| .+++.|++++..+++.++++++++|+.+++++ +
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNE 113 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTT
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCC
Confidence 33444444 456788999999999999999999865599999999 99999999999999988899999999988865 8
Q ss_pred ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccC--CCCcchhHHHHH
Q 014247 178 EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVY--GIDMSAMMPLAK 255 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~ 255 (428)
+||+|++.. .+++. ++..+++++.++|+|||++++....... .........+|...+ ..+...+..+++
T Consensus 114 ~fD~v~~~~---~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 184 (257)
T 3f4k_A 114 ELDLIWSEG---AIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFT-----SERPAEIEDFWMDAYPEISVIPTCIDKME 184 (257)
T ss_dssp CEEEEEEES---CSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESS-----SCCCHHHHHHHHHHCTTCCBHHHHHHHHH
T ss_pred CEEEEEecC---hHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccC-----CCChHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 999999976 45555 5889999999999999999987644221 112223334454422 235778899999
Q ss_pred hcCCCCceEEeec
Q 014247 256 QCAFEEPSVETIT 268 (428)
Q Consensus 256 ~~Gf~~~~~~~~~ 268 (428)
++||+.+....++
T Consensus 185 ~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 185 RAGYTPTAHFILP 197 (257)
T ss_dssp HTTEEEEEEEECC
T ss_pred HCCCeEEEEEECC
Confidence 9999987765443
No 13
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.75 E-value=1.3e-17 Score=156.71 Aligned_cols=107 Identities=21% Similarity=0.314 Sum_probs=90.0
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcC---CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEe
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAG---AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISE 185 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g---~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~ 185 (428)
..++.+|||||||+|.++..+++.. ..+|+|||+| .|++.|++++...+...+|+++++|+.++++ +.||+|++.
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-~~~d~v~~~ 146 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-ENASMVVLN 146 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-CSEEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-cccccceee
Confidence 3688999999999999999999862 1289999999 9999999999988888889999999999877 469999997
Q ss_pred cchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 186 WMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 186 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
...+.+ ...+...++++++++|||||++++..
T Consensus 147 ~~l~~~-~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 147 FTLQFL-EPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp SCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeeeec-CchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 633332 23346789999999999999998754
No 14
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.75 E-value=1.6e-17 Score=156.68 Aligned_cols=166 Identities=20% Similarity=0.205 Sum_probs=127.2
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
..+.+.+.+.+...++.+|||||||+|.++..+++....+|+|+|+| .+++.|++++...++.++++++.+|+.+++++
T Consensus 47 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 47 DRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC
Confidence 34456666667777899999999999999999998634599999999 99999999999999888899999999998775
Q ss_pred -CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhh-hhhh---hccCCCCcchhH
Q 014247 177 -EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSES-IDFW---RNVYGIDMSAMM 251 (428)
Q Consensus 177 -~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~l~ 251 (428)
++||+|++.. .+.+..+...+++++.++|||||++++....... + ........ ..+| .....++...+.
T Consensus 127 ~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (273)
T 3bus_A 127 DASFDAVWALE---SLHHMPDRGRALREMARVLRPGGTVAIADFVLLA-P--VEGAKKEAVDAFRAGGGVLSLGGIDEYE 200 (273)
T ss_dssp TTCEEEEEEES---CTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESS-C--CCHHHHHHHHHHHHHHTCCCCCCHHHHH
T ss_pred CCCccEEEEec---hhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccC-C--CChhHHHHHHHHHhhcCccCCCCHHHHH
Confidence 7899999866 5666777899999999999999999986532210 0 01111111 1111 123446678899
Q ss_pred HHHHhcCCCCceEEeecC
Q 014247 252 PLAKQCAFEEPSVETITG 269 (428)
Q Consensus 252 ~~l~~~Gf~~~~~~~~~~ 269 (428)
.+++++||+...+..+..
T Consensus 201 ~~l~~aGf~~~~~~~~~~ 218 (273)
T 3bus_A 201 SDVRQAELVVTSTVDISA 218 (273)
T ss_dssp HHHHHTTCEEEEEEECHH
T ss_pred HHHHHcCCeEEEEEECcH
Confidence 999999999887776653
No 15
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.73 E-value=1.2e-17 Score=155.87 Aligned_cols=187 Identities=19% Similarity=0.276 Sum_probs=120.0
Q ss_pred chhhHHHhhhccchhhhhhccChhhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHH
Q 014247 72 DFDVAYFHSYAHVGIHEEMIKDRVRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQA 150 (428)
Q Consensus 72 ~~~~~~f~~y~~~~~~~~~~~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a 150 (428)
+.+..||+.|....... ...........+...+...++.+|||||||+|.++..+++.+..+|+|+|++ .+++.|
T Consensus 8 y~~~~~~~~y~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a 83 (253)
T 3g5l_A 8 YDDKHFFEQYSQMPRSK----EGLKAAGEWHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEA 83 (253)
T ss_dssp ---------------------CHHHHHHHHHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred cccHHHHHHHHHhhccc----ccccchhhHHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHH
Confidence 44455666665432111 1112223344566666667889999999999999999999987799999999 999998
Q ss_pred HHHHHHCCCCCcEEEEEcccccccCC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecC--
Q 014247 151 NEVVKANNLTDKVIVLHGRVEDVEID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVT-- 227 (428)
Q Consensus 151 ~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~-- 227 (428)
+++.. ..+++++++|+.+++.+ ++||+|++.. .+++..++..+++++.++|+|||.+++...........
T Consensus 84 ~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 156 (253)
T 3g5l_A 84 KRKTT----SPVVCYEQKAIEDIAIEPDAYNVVLSSL---ALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQ 156 (253)
T ss_dssp HHHCC----CTTEEEEECCGGGCCCCTTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSC
T ss_pred HHhhc----cCCeEEEEcchhhCCCCCCCeEEEEEch---hhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccc
Confidence 88754 34699999999998874 8999999976 56666789999999999999999999863321100000
Q ss_pred -------Ccc-------chhh--hhhhhh----ccCCCCcchhHHHHHhcCCCCceEEeecC
Q 014247 228 -------HPD-------RYSE--SIDFWR----NVYGIDMSAMMPLAKQCAFEEPSVETITG 269 (428)
Q Consensus 228 -------~~~-------~~~~--~~~~~~----~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~ 269 (428)
... .+.. ....|. ..+..+.+.+..+++++||+...+....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~ 218 (253)
T 3g5l_A 157 DWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEP 218 (253)
T ss_dssp SCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCCC
T ss_pred cceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCCC
Confidence 000 0000 000000 01223778899999999999877765543
No 16
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.73 E-value=3.7e-17 Score=157.61 Aligned_cols=160 Identities=18% Similarity=0.165 Sum_probs=122.9
Q ss_pred HHHHhccC-CCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-C
Q 014247 102 AAIMQNQS-FIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-E 177 (428)
Q Consensus 102 ~~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~ 177 (428)
+.+.+.+. ..++.+|||||||+|.++..+++. +. +|+|+|++ .+++.|++++..+++.++++++.+|+.+++++ +
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 184 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKG 184 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCC
Confidence 44566665 678899999999999999999997 65 89999999 99999999999999988899999999998765 8
Q ss_pred ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhc---cCCCCcchhHHHH
Q 014247 178 EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRN---VYGIDMSAMMPLA 254 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~l 254 (428)
+||+|++.. ++++. ++..+++++.++|||||++++....... . .........++.. ...++...+..++
T Consensus 185 ~fD~V~~~~---~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~s~~~~~~~l 256 (312)
T 3vc1_A 185 AVTASWNNE---STMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNP--R--YGQPSKWVSQINAHFECNIHSRREYLRAM 256 (312)
T ss_dssp CEEEEEEES---CGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECT--T--TCSCCHHHHHHHHHHTCCCCBHHHHHHHH
T ss_pred CEeEEEECC---chhhC-CHHHHHHHHHHHcCCCcEEEEEEccccc--c--ccchhHHHHHHHhhhcCCCCCHHHHHHHH
Confidence 999999966 44455 3999999999999999999975432211 0 0011111111111 1345678899999
Q ss_pred HhcCCCCceEEeecCC
Q 014247 255 KQCAFEEPSVETITGE 270 (428)
Q Consensus 255 ~~~Gf~~~~~~~~~~~ 270 (428)
+++||+...++.+...
T Consensus 257 ~~aGf~~~~~~~~~~~ 272 (312)
T 3vc1_A 257 ADNRLVPHTIVDLTPD 272 (312)
T ss_dssp HTTTEEEEEEEECHHH
T ss_pred HHCCCEEEEEEeCCHH
Confidence 9999998888877643
No 17
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.73 E-value=6.8e-17 Score=154.39 Aligned_cols=163 Identities=15% Similarity=0.109 Sum_probs=122.7
Q ss_pred HHHHHHhcc----CCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc
Q 014247 100 YRAAIMQNQ----SFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV 173 (428)
Q Consensus 100 ~~~~i~~~~----~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l 173 (428)
..+.+...+ ...++.+|||||||+|.++..+++. +. +|+|+|+| .+++.|++++...++.++++++++|+.++
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI 144 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC
Confidence 334455555 6678899999999999999999987 66 99999999 99999999998888888899999999998
Q ss_pred cCC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHH
Q 014247 174 EID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMP 252 (428)
Q Consensus 174 ~~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 252 (428)
+++ ++||+|++.. .+++..++..+++++.++|||||++++....... .............+......+...+..
T Consensus 145 ~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (297)
T 2o57_A 145 PCEDNSYDFIWSQD---AFLHSPDKLKVFQECARVLKPRGVMAITDPMKED--GIDKSSIQPILDRIKLHDMGSLGLYRS 219 (297)
T ss_dssp SSCTTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECT--TCCGGGGHHHHHHHTCSSCCCHHHHHH
T ss_pred CCCCCCEeEEEecc---hhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCC--CCchHHHHHHHHHhcCCCCCCHHHHHH
Confidence 875 7899999865 5666677899999999999999999986542210 001111111111111112346778899
Q ss_pred HHHhcCCCCceEEeec
Q 014247 253 LAKQCAFEEPSVETIT 268 (428)
Q Consensus 253 ~l~~~Gf~~~~~~~~~ 268 (428)
+++++||+.+.+..+.
T Consensus 220 ~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 220 LAKECGLVTLRTFSRP 235 (297)
T ss_dssp HHHHTTEEEEEEEECH
T ss_pred HHHHCCCeEEEEEECc
Confidence 9999999987776543
No 18
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.71 E-value=1.3e-16 Score=144.77 Aligned_cols=159 Identities=19% Similarity=0.277 Sum_probs=119.6
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID- 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~- 176 (428)
.+.+.+.+.+...++ +|||||||+|.++..+++....+|+|+|++ .+++.|++++...++.++++++++|+.+++++
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 445555555554555 999999999999999999733499999999 99999999999999888899999999998765
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchh-------hhhhhhh-----ccCC
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYS-------ESIDFWR-----NVYG 244 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~-------~~~~~~~-----~~~~ 244 (428)
++||+|++.. .+++..++..+++++.++|+|||.+++.... ....... .....|. ....
T Consensus 110 ~~~D~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (219)
T 3dlc_A 110 NYADLIVSRG---SVFFWEDVATAFREIYRILKSGGKTYIGGGF------GNKELRDSISAEMIRKNPDWKEFNRKNISQ 180 (219)
T ss_dssp TCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEECC------SSHHHHHHHHHHHHHHCTTHHHHHHHHSSH
T ss_pred ccccEEEECc---hHhhccCHHHHHHHHHHhCCCCCEEEEEecc------CcHHHHHHHHHHHHHhHHHHHhhhhhcccc
Confidence 8899999976 5566677899999999999999999875321 1111100 0001121 1223
Q ss_pred CCcchhHHHHHhcCCCCceEEee
Q 014247 245 IDMSAMMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 245 ~~~~~l~~~l~~~Gf~~~~~~~~ 267 (428)
++.+.+..+++++||+.+.+...
T Consensus 181 ~~~~~~~~~l~~aGf~~v~~~~~ 203 (219)
T 3dlc_A 181 ENVERFQNVLDEIGISSYEIILG 203 (219)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CCHHHHHHHHHHcCCCeEEEEec
Confidence 35678999999999998776543
No 19
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.71 E-value=1.2e-16 Score=149.74 Aligned_cols=154 Identities=21% Similarity=0.266 Sum_probs=116.5
Q ss_pred HHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-CceeE
Q 014247 104 IMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEVDV 181 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~Dl 181 (428)
+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+| .+++.|++++...++. ++.++.+|+.+++++ ++||+
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~fD~ 106 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPFTDERFHI 106 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCSCTTCEEE
T ss_pred HHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCCCCCCEEE
Confidence 33444556889999999999999999999865 99999999 9999999999888876 599999999998875 89999
Q ss_pred EEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchh---hhhhhhh---ccCCCCcchhHHHHH
Q 014247 182 IISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYS---ESIDFWR---NVYGIDMSAMMPLAK 255 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~l~~~l~ 255 (428)
|++.. .+++..++..+++++.++|||||.+++..... + . ..... .....+. ....++...+..+++
T Consensus 107 V~~~~---~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~---~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 178 (260)
T 1vl5_A 107 VTCRI---AAHHFPNPASFVSEAYRVLKKGGQLLLVDNSA---P-E-NDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLE 178 (260)
T ss_dssp EEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB---C-S-SHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHH
T ss_pred EEEhh---hhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCC---C-C-CHHHHHHHHHHHHhcCccccCCCCHHHHHHHHH
Confidence 99976 56677789999999999999999998753211 1 0 11111 1001011 123456788999999
Q ss_pred hcCCCCceEEee
Q 014247 256 QCAFEEPSVETI 267 (428)
Q Consensus 256 ~~Gf~~~~~~~~ 267 (428)
++||+...+...
T Consensus 179 ~aGf~~~~~~~~ 190 (260)
T 1vl5_A 179 EAGFELEELHCF 190 (260)
T ss_dssp HHTCEEEEEEEE
T ss_pred HCCCeEEEEEEe
Confidence 999997766654
No 20
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.71 E-value=8.8e-17 Score=154.17 Aligned_cols=160 Identities=16% Similarity=0.140 Sum_probs=121.9
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE 177 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~ 177 (428)
..+.+.+.+...++.+|||||||+|.++..+++. | .+|+|+|+| .+++.|++++...++.++++++.+|+.++ ++
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~ 136 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DE 136 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CC
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CC
Confidence 3445566666788999999999999999999998 7 489999999 99999999999999988899999999987 68
Q ss_pred ceeEEEEecchhhhcch---------hhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhh-----------hh
Q 014247 178 EVDVIISEWMGYMLLYE---------SMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSES-----------ID 237 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~---------~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~-----------~~ 237 (428)
+||+|++.. ++++. .....+++++.++|||||++++...... ........ ..
T Consensus 137 ~fD~v~~~~---~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 208 (302)
T 3hem_A 137 PVDRIVSLG---AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP-----DKEEAQELGLTSPMSLLRFIK 208 (302)
T ss_dssp CCSEEEEES---CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC-----CHHHHHHHTCCCCHHHHHHHH
T ss_pred CccEEEEcc---hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc-----CccchhhccccccccccchHH
Confidence 999999976 34333 4568999999999999999997643221 00000000 01
Q ss_pred h-----hhccCCCCcchhHHHHHhcCCCCceEEeecCC
Q 014247 238 F-----WRNVYGIDMSAMMPLAKQCAFEEPSVETITGE 270 (428)
Q Consensus 238 ~-----~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~ 270 (428)
+ +...+..+.+.+..+++++||+...++.+...
T Consensus 209 ~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~ 246 (302)
T 3hem_A 209 FILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRIGAN 246 (302)
T ss_dssp HHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEECGGG
T ss_pred HHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEEeCchh
Confidence 1 11123345778999999999998888776654
No 21
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.71 E-value=4.4e-17 Score=154.83 Aligned_cols=154 Identities=18% Similarity=0.225 Sum_probs=115.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--CCCceeEEEEecc
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--IDEEVDVIISEWM 187 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~~~~~DlVvs~~~ 187 (428)
.++.+|||||||+|.++..+++.|. +|+|+|++ .+++.|++++...++..+++++++|+.+++ .+++||+|++..
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~- 144 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA- 144 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES-
T ss_pred CCCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc-
Confidence 3468999999999999999999966 89999999 999999999998888778999999999987 358999999976
Q ss_pred hhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCC--ccchhhhh--------hhhhccCCCCcchhHHHHHhc
Q 014247 188 GYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTH--PDRYSESI--------DFWRNVYGIDMSAMMPLAKQC 257 (428)
Q Consensus 188 ~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~--~~~~~~~~--------~~~~~~~~~~~~~l~~~l~~~ 257 (428)
++.+..++..+++++.++|||||.+++...+........ ...+.... ........++...+..+++++
T Consensus 145 --~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 222 (285)
T 4htf_A 145 --VLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEA 222 (285)
T ss_dssp --CGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHT
T ss_pred --hhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHC
Confidence 666667889999999999999999987643221000000 00000000 001112456778999999999
Q ss_pred CCCCceEEeec
Q 014247 258 AFEEPSVETIT 268 (428)
Q Consensus 258 Gf~~~~~~~~~ 268 (428)
||+...+..+.
T Consensus 223 Gf~v~~~~~~~ 233 (285)
T 4htf_A 223 GWQIMGKTGVR 233 (285)
T ss_dssp TCEEEEEEEES
T ss_pred CCceeeeeeEE
Confidence 99988777654
No 22
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.71 E-value=4.1e-17 Score=151.07 Aligned_cols=148 Identities=15% Similarity=0.184 Sum_probs=109.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.++.+|||||||+|.++..+++.+. +|+|+|+| .+++.|+++... +++++++|+.++..+++||+|++..
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~~~~fD~v~~~~--- 111 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQLPRRYDNIVLTH--- 111 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCCSSCEEEEEEES---
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCcCCcccEEEEhh---
Confidence 5678999999999999999999876 89999999 999998877432 5999999999885568999999866
Q ss_pred hhcchhhHHHHHHHHh-cccccCeEEEccCCeeeEee--------c-CCccchhhhhhhhhccCCCCcchhHHHHHhcCC
Q 014247 190 MLLYESMLGSVITARD-RWLKRGGLILPSYATLYMAP--------V-THPDRYSESIDFWRNVYGIDMSAMMPLAKQCAF 259 (428)
Q Consensus 190 ~l~~~~~~~~~l~~~~-~~LkpgG~lv~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 259 (428)
++++..++..+++++. ++|||||.+++..++..... . .....+............++...+..+++++||
T Consensus 112 ~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 191 (250)
T 2p7i_A 112 VLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGL 191 (250)
T ss_dssp CGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTC
T ss_pred HHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCC
Confidence 6777778899999999 99999999997643211000 0 000000000001112345678899999999999
Q ss_pred CCceEEee
Q 014247 260 EEPSVETI 267 (428)
Q Consensus 260 ~~~~~~~~ 267 (428)
+...+..+
T Consensus 192 ~~~~~~~~ 199 (250)
T 2p7i_A 192 QVTYRSGI 199 (250)
T ss_dssp EEEEEEEE
T ss_pred eEEEEeee
Confidence 98776643
No 23
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.70 E-value=8.3e-17 Score=146.60 Aligned_cols=156 Identities=13% Similarity=0.158 Sum_probs=107.8
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCC----cEEEEEcccccccC
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTD----KVIVLHGRVEDVEI 175 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~----~v~~~~~d~~~l~~ 175 (428)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|++ .+++.|++++..+++.+ +++++++|+...+.
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (217)
T 3jwh_A 19 NGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK 98 (217)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc
Confidence 344444444677899999999999999999974 3599999999 99999999988777764 79999999876655
Q ss_pred C-CceeEEEEecchhhhcchh--hHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhH-
Q 014247 176 D-EEVDVIISEWMGYMLLYES--MLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMM- 251 (428)
Q Consensus 176 ~-~~~DlVvs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 251 (428)
. ++||+|++.. .+.+.. +...+++++.++|||||+++......+...+.. ............+.+...++.
T Consensus 99 ~~~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~ 173 (217)
T 3jwh_A 99 RFHGYDAATVIE---VIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFAN--LPAGKLRHKDHRFEWTRSQFQN 173 (217)
T ss_dssp GGCSCSEEEEES---CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-------------CCSCBCHHHHHH
T ss_pred cCCCcCEEeeHH---HHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcc--cccccccccccccccCHHHHHH
Confidence 4 7899999876 444444 458999999999999997775432211100000 000000111223456777777
Q ss_pred ---HHHHhcCCCCc
Q 014247 252 ---PLAKQCAFEEP 262 (428)
Q Consensus 252 ---~~l~~~Gf~~~ 262 (428)
.+++++||+..
T Consensus 174 ~~~~~~~~~Gf~v~ 187 (217)
T 3jwh_A 174 WANKITERFAYNVQ 187 (217)
T ss_dssp HHHHHHHHSSEEEE
T ss_pred HHHHHHHHcCceEE
Confidence 77788998653
No 24
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.70 E-value=2.3e-16 Score=143.74 Aligned_cols=155 Identities=12% Similarity=0.190 Sum_probs=107.4
Q ss_pred HHhccCCCCCCEEEEEcCCCcHHHHHHHHcCC-CeEEEEeCh-HHHHHHHHHHHHCCCCC----cEEEEEcccccccCC-
Q 014247 104 IMQNQSFIEGKVVVDVGCGTGILSIFCAQAGA-KRVYAVDAS-DIAVQANEVVKANNLTD----KVIVLHGRVEDVEID- 176 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~-~~V~giD~s-~~~~~a~~~~~~~~~~~----~v~~~~~d~~~l~~~- 176 (428)
+.+.+...++.+|||||||+|.++..+++.+. .+|+|+|+| .+++.|++++..+++.+ +++++++|+...+..
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 100 (219)
T 3jwg_A 21 VVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRF 100 (219)
T ss_dssp HHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGG
T ss_pred HHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccccc
Confidence 33333335778999999999999999999753 599999999 99999999988777654 799999999776653
Q ss_pred CceeEEEEecchhhhcchh--hHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhH---
Q 014247 177 EEVDVIISEWMGYMLLYES--MLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMM--- 251 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--- 251 (428)
++||+|++.. ++.+.. +...+++++.++|||||.++......+..... .............+.+...++.
T Consensus 101 ~~fD~V~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~ 175 (219)
T 3jwg_A 101 SGYDAATVIE---VIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYG--NLFEGNLRHRDHRFEWTRKEFQTWA 175 (219)
T ss_dssp TTCSEEEEES---CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCC--CT-----GGGCCTTSBCHHHHHHHH
T ss_pred CCCCEEEEHH---HHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhc--ccCcccccccCceeeecHHHHHHHH
Confidence 7899999876 444444 45799999999999999776432211110000 0000011112233456777777
Q ss_pred -HHHHhcCCCCce
Q 014247 252 -PLAKQCAFEEPS 263 (428)
Q Consensus 252 -~~l~~~Gf~~~~ 263 (428)
.+++++||+...
T Consensus 176 ~~l~~~~Gf~v~~ 188 (219)
T 3jwg_A 176 VKVAEKYGYSVRF 188 (219)
T ss_dssp HHHHHHHTEEEEE
T ss_pred HHHHHHCCcEEEE
Confidence 677888996543
No 25
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.69 E-value=1.5e-16 Score=144.91 Aligned_cols=151 Identities=17% Similarity=0.139 Sum_probs=117.2
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC--CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-Cc
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG--AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EE 178 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~ 178 (428)
.+...+...++.+|||+|||+|.++..+++.+ ..+|+|+|++ .+++.|++++...++. +++++.+|+.+++.+ ++
T Consensus 28 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~ 106 (219)
T 3dh0_A 28 KVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDNT 106 (219)
T ss_dssp HHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSSC
T ss_pred HHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCCC
Confidence 34444556788999999999999999999984 3499999999 9999999999888876 599999999988765 78
Q ss_pred eeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcC
Q 014247 179 VDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCA 258 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 258 (428)
||+|++.. .+.+..++..+++++.++|+|||.+++....... ..... .....++.+.+..+++++|
T Consensus 107 fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~------~~~~~-----~~~~~~~~~~~~~~l~~~G 172 (219)
T 3dh0_A 107 VDFIFMAF---TFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEE------RDKGP-----PPEEVYSEWEVGLILEDAG 172 (219)
T ss_dssp EEEEEEES---CGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSC------CSSSC-----CGGGSCCHHHHHHHHHHTT
T ss_pred eeEEEeeh---hhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccc------cccCC-----chhcccCHHHHHHHHHHCC
Confidence 99999976 5566677899999999999999999875321110 00000 0123457788999999999
Q ss_pred CCCceEEeec
Q 014247 259 FEEPSVETIT 268 (428)
Q Consensus 259 f~~~~~~~~~ 268 (428)
|+......+.
T Consensus 173 f~~~~~~~~~ 182 (219)
T 3dh0_A 173 IRVGRVVEVG 182 (219)
T ss_dssp CEEEEEEEET
T ss_pred CEEEEEEeeC
Confidence 9987765544
No 26
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.69 E-value=2.2e-16 Score=150.08 Aligned_cols=165 Identities=17% Similarity=0.173 Sum_probs=121.6
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHH-cCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQ-AGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~-~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
...+.+.+.+...++.+|||||||+|.++..+++ .|. +|+|+|+| .+++.|++++...++..+++++.+|+.+++
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 127 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-- 127 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--
Confidence 3445566666677889999999999999999995 466 99999999 999999999988888778999999998876
Q ss_pred CceeEEEEecchhhhcch--hhHHHHHHHHhcccccCeEEEccCCeeeEeec----CCcc--chhhhhh-----hhhccC
Q 014247 177 EEVDVIISEWMGYMLLYE--SMLGSVITARDRWLKRGGLILPSYATLYMAPV----THPD--RYSESID-----FWRNVY 243 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~----~~~~--~~~~~~~-----~~~~~~ 243 (428)
++||+|++.. ++++. .++..+++++.++|||||.+++.......... ..+. ....... .+....
T Consensus 128 ~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (287)
T 1kpg_A 128 EPVDRIVSIG---AFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGR 204 (287)
T ss_dssp CCCSEEEEES---CGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCC
T ss_pred CCeeEEEEeC---chhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCC
Confidence 8999999966 45554 56899999999999999999986543221000 0000 0000001 111222
Q ss_pred CCCcchhHHHHHhcCCCCceEEeecC
Q 014247 244 GIDMSAMMPLAKQCAFEEPSVETITG 269 (428)
Q Consensus 244 ~~~~~~l~~~l~~~Gf~~~~~~~~~~ 269 (428)
..+.+.+..+++++||+...+.....
T Consensus 205 ~~s~~~~~~~l~~aGf~~~~~~~~~~ 230 (287)
T 1kpg_A 205 LPSIPMVQECASANGFTVTRVQSLQP 230 (287)
T ss_dssp CCCHHHHHHHHHTTTCEEEEEEECHH
T ss_pred CCCHHHHHHHHHhCCcEEEEEEeCcH
Confidence 34678899999999999888776543
No 27
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.69 E-value=4.2e-16 Score=148.15 Aligned_cols=162 Identities=14% Similarity=0.196 Sum_probs=116.7
Q ss_pred HHHHHHhc-cCCCCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC
Q 014247 100 YRAAIMQN-QSFIEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI 175 (428)
Q Consensus 100 ~~~~i~~~-~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~ 175 (428)
+...+.+. ....++.+|||||||+|.++..+++. + ..+|+|+|+| .+++.|++++...+. +++++++|+.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~ 86 (284)
T 3gu3_A 9 YVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL 86 (284)
T ss_dssp HHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC
T ss_pred HHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc
Confidence 33444443 35567899999999999999999987 2 3499999999 999999998877655 69999999999888
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCee-----eEeecCCccc-hhhhhhhhhc--------
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATL-----YMAPVTHPDR-YSESIDFWRN-------- 241 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~-----~~~~~~~~~~-~~~~~~~~~~-------- 241 (428)
+++||+|++.. .+.+..+...+++++.++|+|||.+++..+.. ... ...... .......|..
T Consensus 87 ~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (284)
T 3gu3_A 87 NDKYDIAICHA---FLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYL-LDGEKQSEFIQLGVLQKLFESDTQR 162 (284)
T ss_dssp SSCEEEEEEES---CGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEE-ETTSCHHHHCCHHHHHHHHHHHHHH
T ss_pred CCCeeEEEECC---hhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccce-ecCcchhhccchHHHHHHHHHHhhh
Confidence 88999999976 56666788999999999999999999766541 110 010000 0000111111
Q ss_pred --cCCCCcchhHHHHHhcCCCCceEEee
Q 014247 242 --VYGIDMSAMMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 242 --~~~~~~~~l~~~l~~~Gf~~~~~~~~ 267 (428)
........+..+++++||+.+.....
T Consensus 163 ~~~~~~~~~~l~~~l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 163 NGKDGNIGMKIPIYLSELGVKNIECRVS 190 (284)
T ss_dssp TCCCTTGGGTHHHHHHHTTCEEEEEEEC
T ss_pred hcccccHHHHHHHHHHHcCCCeEEEEEc
Confidence 11223567899999999988766543
No 28
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.69 E-value=2.2e-16 Score=145.34 Aligned_cols=155 Identities=19% Similarity=0.209 Sum_probs=110.8
Q ss_pred HHHHHhccC-CCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC
Q 014247 101 RAAIMQNQS-FIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE 177 (428)
Q Consensus 101 ~~~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~ 177 (428)
.+.+...+. ..++.+|||||||+|.++..+++.. ..+|+|+|+| .+++.|++++...+ +++++++|+.+++.++
T Consensus 32 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~ 108 (234)
T 3dtn_A 32 YGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFEE 108 (234)
T ss_dssp HHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCCS
T ss_pred HHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCCC
Confidence 344555544 4678899999999999999999983 4499999999 99999988865543 6999999999988779
Q ss_pred ceeEEEEecchhhhcchhhH--HHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhh---------------
Q 014247 178 EVDVIISEWMGYMLLYESML--GSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWR--------------- 240 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 240 (428)
+||+|++.. .+++..+. ..+++++.++|||||.+++...... ............|.
T Consensus 109 ~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (234)
T 3dtn_A 109 KYDMVVSAL---SIHHLEDEDKKELYKRSYSILKESGIFINADLVHG----ETAFIENLNKTIWRQYVENSGLTEEEIAA 181 (234)
T ss_dssp CEEEEEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBC----SSHHHHHHHHHHHHHHHHTSSCCHHHHHT
T ss_pred CceEEEEeC---ccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCC----CChhhhhHHHHHHHHHHHhcCCCHHHHHH
Confidence 999999976 44444433 4699999999999999997543211 00000000011111
Q ss_pred ------ccCCCCcchhHHHHHhcCCCCceEE
Q 014247 241 ------NVYGIDMSAMMPLAKQCAFEEPSVE 265 (428)
Q Consensus 241 ------~~~~~~~~~l~~~l~~~Gf~~~~~~ 265 (428)
....++...+..+++++||+.+.+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 212 (234)
T 3dtn_A 182 GYERSKLDKDIEMNQQLNWLKEAGFRDVSCI 212 (234)
T ss_dssp TC----CCCCCBHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhcccccccCHHHHHHHHHHcCCCceeee
Confidence 1223456778889999999987654
No 29
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.69 E-value=3.3e-16 Score=145.84 Aligned_cols=155 Identities=9% Similarity=0.019 Sum_probs=115.2
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-C
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-E 177 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~ 177 (428)
+...+...+...++.+|||||||+|.++..+++.+..+|+|+|++ .+++.|++++... .+++++++|+.+++++ +
T Consensus 81 ~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~ 157 (254)
T 1xtp_A 81 GSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPN 157 (254)
T ss_dssp HHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSS
T ss_pred HHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCC
Confidence 344555555566789999999999999999998877689999999 9999998876543 4699999999998765 7
Q ss_pred ceeEEEEecchhhhcch--hhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHH
Q 014247 178 EVDVIISEWMGYMLLYE--SMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAK 255 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 255 (428)
+||+|++.. .+++. .++..+++++.++|+|||.+++...... ....+.. .....+..+...+..+++
T Consensus 158 ~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~l~ 226 (254)
T 1xtp_A 158 TYDLIVIQW---TAIYLTDADFVKFFKHCQQALTPNGYIFFKENCST-----GDRFLVD---KEDSSLTRSDIHYKRLFN 226 (254)
T ss_dssp CEEEEEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC-------CCEEEE---TTTTEEEBCHHHHHHHHH
T ss_pred CeEEEEEcc---hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC-----cccceec---ccCCcccCCHHHHHHHHH
Confidence 899999976 44454 5689999999999999999997653110 0000000 001122346788999999
Q ss_pred hcCCCCceEEeec
Q 014247 256 QCAFEEPSVETIT 268 (428)
Q Consensus 256 ~~Gf~~~~~~~~~ 268 (428)
++||+...+....
T Consensus 227 ~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 227 ESGVRVVKEAFQE 239 (254)
T ss_dssp HHTCCEEEEEECT
T ss_pred HCCCEEEEeeecC
Confidence 9999987766543
No 30
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.68 E-value=3.2e-16 Score=148.04 Aligned_cols=164 Identities=20% Similarity=0.306 Sum_probs=121.8
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
.+.+.+.......++.+|||||||+|.++..+++.+ ..+|+|+|++ .+++.|++++..+++. +++++.+|+.+++++
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~ 102 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPFE 102 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCSC
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCCC
Confidence 455566666666788999999999999999999984 4599999999 9999999999988876 499999999998764
Q ss_pred -CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCee---eEeecCCccc---hhhhhhh--hhccCCCCc
Q 014247 177 -EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATL---YMAPVTHPDR---YSESIDF--WRNVYGIDM 247 (428)
Q Consensus 177 -~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~---~~~~~~~~~~---~~~~~~~--~~~~~~~~~ 247 (428)
++||+|++.. .+.+..++..+++++.++|+|||.+++..... ...+. .... +...... +.....+..
T Consensus 103 ~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (276)
T 3mgg_A 103 DSSFDHIFVCF---VLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPE-GKKAIEAWNCLIRVQAYMKGNSLVG 178 (276)
T ss_dssp TTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESC-CHHHHHHHHHHHHHHHHTTCCTTGG
T ss_pred CCCeeEEEEec---hhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCC-cHHHHHHHHHHHHHHHhcCCCcchH
Confidence 8999999976 66677778899999999999999998764321 11111 1110 0000000 011223456
Q ss_pred chhHHHHHhcCCCCceEEee
Q 014247 248 SAMMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 248 ~~l~~~l~~~Gf~~~~~~~~ 267 (428)
..+..+++++||+.+.++..
T Consensus 179 ~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 179 RQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp GGHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHCCCCeEEEeeE
Confidence 78999999999998877654
No 31
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.68 E-value=1.9e-16 Score=152.09 Aligned_cols=167 Identities=14% Similarity=0.134 Sum_probs=116.9
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHH--HcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCA--QAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE 174 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la--~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~ 174 (428)
..+.+.+... ..++.+|||||||+|.++..++ .....+|+|+|++ .+++.|++++...++.++++++++|+.+++
T Consensus 106 ~~~~~~l~~~--l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 183 (305)
T 3ocj_A 106 GHFRRALQRH--LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD 183 (305)
T ss_dssp HHHHHHHHHH--CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC
T ss_pred HHHHHHHHhh--CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC
Confidence 3355555443 3678999999999999999985 3344599999999 999999999998888888999999999988
Q ss_pred CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCcc----chhh-----hhhhhhcc---
Q 014247 175 IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPD----RYSE-----SIDFWRNV--- 242 (428)
Q Consensus 175 ~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~--- 242 (428)
++++||+|++..+.+.+........+++++.++|||||++++.............. .+.. ....+...
T Consensus 184 ~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 263 (305)
T 3ocj_A 184 TREGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQP 263 (305)
T ss_dssp CCSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCC
T ss_pred ccCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhh
Confidence 77999999996633333233334458999999999999999865321100000000 0000 00001111
Q ss_pred ---CCCCcchhHHHHHhcCCCCceEEe
Q 014247 243 ---YGIDMSAMMPLAKQCAFEEPSVET 266 (428)
Q Consensus 243 ---~~~~~~~l~~~l~~~Gf~~~~~~~ 266 (428)
..++...+..+++++||+.+.+..
T Consensus 264 ~~~~~~~~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 264 RWNALRTHAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp SCCCCCCHHHHHHHHHHTTCEEEEEEC
T ss_pred hhhccCCHHHHHHHHHHCCCEEEEEEc
Confidence 225688899999999999876664
No 32
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.68 E-value=4.7e-16 Score=150.12 Aligned_cols=165 Identities=15% Similarity=0.137 Sum_probs=122.2
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
...+.+.+.+...++.+|||||||+|.++..+++. |+ +|+|+|+| .+++.|++++...++.++++++.+|+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 153 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-- 153 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--
Confidence 34455666666778899999999999999999987 77 99999999 999999999998888888999999998875
Q ss_pred CceeEEEEecchhhhcch--hhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccch------hhhhhh-----hhccC
Q 014247 177 EEVDVIISEWMGYMLLYE--SMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRY------SESIDF-----WRNVY 243 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~ 243 (428)
++||+|++.. ++++. .++..+++++.++|||||++++...............+ .....+ +....
T Consensus 154 ~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (318)
T 2fk8_A 154 EPVDRIVSIE---AFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGR 230 (318)
T ss_dssp CCCSEEEEES---CGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCC
T ss_pred CCcCEEEEeC---hHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCc
Confidence 7899999976 44444 57899999999999999999976543211000000000 000011 11223
Q ss_pred CCCcchhHHHHHhcCCCCceEEeecC
Q 014247 244 GIDMSAMMPLAKQCAFEEPSVETITG 269 (428)
Q Consensus 244 ~~~~~~l~~~l~~~Gf~~~~~~~~~~ 269 (428)
..+.+.+..+++++||+...+..+..
T Consensus 231 ~~s~~~~~~~l~~aGf~~~~~~~~~~ 256 (318)
T 2fk8_A 231 LPSTEMMVEHGEKAGFTVPEPLSLRP 256 (318)
T ss_dssp CCCHHHHHHHHHHTTCBCCCCEECHH
T ss_pred CCCHHHHHHHHHhCCCEEEEEEecch
Confidence 34678899999999999888776543
No 33
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.68 E-value=5e-16 Score=140.70 Aligned_cols=137 Identities=22% Similarity=0.232 Sum_probs=106.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.++.+|||||||+|.++..+++.+. +|+|+|++ .+++.|++++ ++.++.+|+.+++..++||+|++..
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~fD~v~~~~--- 110 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-------GRPVRTMLFHQLDAIDAYDAVWAHA--- 110 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCCCCSCEEEEEECS---
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-------CCceEEeeeccCCCCCcEEEEEecC---
Confidence 5688999999999999999999876 99999999 9999998876 3678899999988679999999976
Q ss_pred hhcchh--hHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcC-CCCceEEe
Q 014247 190 MLLYES--MLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCA-FEEPSVET 266 (428)
Q Consensus 190 ~l~~~~--~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~ 266 (428)
.+++.. ++..+++++.++|||||++++..... ....... +......++...+..+++++| |+...+..
T Consensus 111 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 111 CLLHVPRDELADVLKLIWRALKPGGLFYASYKSG------EGEGRDK---LARYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC------SSCEECT---TSCEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCC------Ccccccc---cchhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 444443 68899999999999999998753211 1111010 111234568899999999999 99877664
Q ss_pred e
Q 014247 267 I 267 (428)
Q Consensus 267 ~ 267 (428)
.
T Consensus 182 ~ 182 (211)
T 3e23_A 182 S 182 (211)
T ss_dssp E
T ss_pred c
Confidence 4
No 34
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.68 E-value=1.5e-16 Score=146.74 Aligned_cols=141 Identities=19% Similarity=0.155 Sum_probs=111.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.++.+|||||||+|.++..+++.+. +|+|+|+| .+++.|++++...+...+++++++|+.+++..++||+|++..
T Consensus 65 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~--- 140 (235)
T 3lcc_A 65 LPLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYV--- 140 (235)
T ss_dssp SCCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEES---
T ss_pred CCCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEECh---
Confidence 3446999999999999999988766 89999999 999999998877656667999999999987778999999976
Q ss_pred hhcchh--hHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCCCCceEEee
Q 014247 190 MLLYES--MLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 190 ~l~~~~--~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 267 (428)
.+.+.. +...+++++.++|+|||.+++...... .. .....+.++...+..+++++||+...++..
T Consensus 141 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------~~------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 141 FFCAIEPEMRPAWAKSMYELLKPDGELITLMYPIT-------DH------VGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp STTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCS-------CC------CSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccc-------cc------CCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 343333 789999999999999999986432211 00 001124467889999999999998777665
Q ss_pred c
Q 014247 268 T 268 (428)
Q Consensus 268 ~ 268 (428)
.
T Consensus 208 ~ 208 (235)
T 3lcc_A 208 P 208 (235)
T ss_dssp T
T ss_pred C
Confidence 4
No 35
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.68 E-value=1.1e-16 Score=148.07 Aligned_cols=117 Identities=20% Similarity=0.271 Sum_probs=93.7
Q ss_pred HHHHHHHhccCC--CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC
Q 014247 99 TYRAAIMQNQSF--IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI 175 (428)
Q Consensus 99 ~~~~~i~~~~~~--~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~ 175 (428)
.+.+.+.+.+.. .++.+|||||||+|.++..+++.+. +|+|+|++ .+++.|+++....+. ++.++++|+.+++.
T Consensus 22 ~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~ 98 (246)
T 1y8c_A 22 KWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNI 98 (246)
T ss_dssp HHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCC
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCc
Confidence 344444444332 3778999999999999999999876 89999999 999999999887765 58999999999877
Q ss_pred CCceeEEEEec-chhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 176 DEEVDVIISEW-MGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 176 ~~~~DlVvs~~-~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+++||+|++.. ..+.+....++..+++++.++|+|||.+++..
T Consensus 99 ~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 99 NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 78999999853 32223223678999999999999999998743
No 36
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.67 E-value=6.4e-16 Score=143.01 Aligned_cols=153 Identities=15% Similarity=0.189 Sum_probs=116.4
Q ss_pred HhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-CceeEE
Q 014247 105 MQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEVDVI 182 (428)
Q Consensus 105 ~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlV 182 (428)
.+.+...++.+|||||||+|.++..+++.+. +|+|+|++ .+++.|++++..+++. +++++++|+.+++++ ++||+|
T Consensus 14 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v 91 (239)
T 1xxl_A 14 IKTAECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFPDDSFDII 91 (239)
T ss_dssp HHHHTCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSCTTCEEEE
T ss_pred HHHhCcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCCCCcEEEE
Confidence 3444567889999999999999999999865 99999999 9999999998888775 599999999998775 789999
Q ss_pred EEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhh------hccCCCCcchhHHHHHh
Q 014247 183 ISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFW------RNVYGIDMSAMMPLAKQ 256 (428)
Q Consensus 183 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~l~~ 256 (428)
++.. .+++..++..+++++.++|+|||.+++...... ...........+ .....++...+..++++
T Consensus 92 ~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 163 (239)
T 1xxl_A 92 TCRY---AAHHFSDVRKAVREVARVLKQDGRFLLVDHYAP-----EDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSA 163 (239)
T ss_dssp EEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBC-----SSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHH
T ss_pred EECC---chhhccCHHHHHHHHHHHcCCCcEEEEEEcCCC-----CChhHHHHHHHHHHhccccccCCCCHHHHHHHHHH
Confidence 9975 566667789999999999999999987532210 011111111100 11334567889999999
Q ss_pred cCCCCceEEee
Q 014247 257 CAFEEPSVETI 267 (428)
Q Consensus 257 ~Gf~~~~~~~~ 267 (428)
+||+...+...
T Consensus 164 aGf~~~~~~~~ 174 (239)
T 1xxl_A 164 NQLAYQDIQKW 174 (239)
T ss_dssp TTEEEEEEEEE
T ss_pred CCCcEEEEEee
Confidence 99987666544
No 37
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.67 E-value=8e-17 Score=144.98 Aligned_cols=139 Identities=17% Similarity=0.200 Sum_probs=106.9
Q ss_pred CCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-CceeEEEEecchhh
Q 014247 113 GKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEVDVIISEWMGYM 190 (428)
Q Consensus 113 ~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~~~~~ 190 (428)
+.+|||||||+|.++..+++.|. +|+|+|++ .+++.|+++. .+++++++|+.+++.+ ++||+|++.. .
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~---~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWY---S 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEES---S
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehh---h
Confidence 78999999999999999999977 89999999 9999888762 2589999999998765 8999999965 4
Q ss_pred hcch--hhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCCCCceEEeec
Q 014247 191 LLYE--SMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVETIT 268 (428)
Q Consensus 191 l~~~--~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 268 (428)
+++. .++..+++++.++|+|||.+++....... ...+. ......+.++...+..+++++||+...+....
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPS-----LEPMY---HPVATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSS-----CEEEC---CSSSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCc-----hhhhh---chhhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 4444 37899999999999999999875422110 00000 01112234678899999999999988777665
Q ss_pred C
Q 014247 269 G 269 (428)
Q Consensus 269 ~ 269 (428)
.
T Consensus 184 ~ 184 (203)
T 3h2b_A 184 R 184 (203)
T ss_dssp T
T ss_pred C
Confidence 4
No 38
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.67 E-value=3.6e-16 Score=142.97 Aligned_cols=118 Identities=25% Similarity=0.320 Sum_probs=96.9
Q ss_pred hHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc
Q 014247 96 RTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE 174 (428)
Q Consensus 96 r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~ 174 (428)
+.+.+.+.+.+.+ .++.+|||+|||+|.++..+++.+. +|+|+|++ .+++.|+++...++ .+++++++|+.+++
T Consensus 24 ~~~~~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~ 98 (227)
T 1ve3_A 24 RIETLEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLS 98 (227)
T ss_dssp HHHHHHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCC
T ss_pred HHHHHHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCC
Confidence 3445566666665 3478999999999999999999877 99999999 99999999988776 46999999999877
Q ss_pred CC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 175 ID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 175 ~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
.+ ++||+|++.... .+.+..++..+++++.++|+|||.+++...
T Consensus 99 ~~~~~~D~v~~~~~~-~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 99 FEDKTFDYVIFIDSI-VHFEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp SCTTCEEEEEEESCG-GGCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCcEEEEEEcCch-HhCCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 64 789999997631 244556788999999999999999987644
No 39
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.67 E-value=3.1e-16 Score=146.83 Aligned_cols=159 Identities=21% Similarity=0.310 Sum_probs=118.0
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-C
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-E 177 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~ 177 (428)
.+.+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+| .+++.|+++.... .+++++++|+.+++.+ +
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~ 119 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFPEN 119 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCCTT
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCCCC
Confidence 455556666778899999999999999999997 55 99999999 9999988775443 5699999999998774 8
Q ss_pred ceeEEEEecchhhhcch--hhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHH
Q 014247 178 EVDVIISEWMGYMLLYE--SMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAK 255 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 255 (428)
+||+|++.. .+++. .++..+++++.++|||||.+++......... .....+..... ......++...+..+++
T Consensus 120 ~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 194 (266)
T 3ujc_A 120 NFDLIYSRD---AILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKE-NWDDEFKEYVK-QRKYTLITVEEYADILT 194 (266)
T ss_dssp CEEEEEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG-GCCHHHHHHHH-HHTCCCCCHHHHHHHHH
T ss_pred cEEEEeHHH---HHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc-cchHHHHHHHh-cCCCCCCCHHHHHHHHH
Confidence 999999976 55565 7899999999999999999998653221100 00111111000 01123457888999999
Q ss_pred hcCCCCceEEeec
Q 014247 256 QCAFEEPSVETIT 268 (428)
Q Consensus 256 ~~Gf~~~~~~~~~ 268 (428)
++||+.+.+..+.
T Consensus 195 ~~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 195 ACNFKNVVSKDLS 207 (266)
T ss_dssp HTTCEEEEEEECH
T ss_pred HcCCeEEEEEeCC
Confidence 9999988777654
No 40
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.67 E-value=2.3e-16 Score=150.99 Aligned_cols=166 Identities=12% Similarity=0.124 Sum_probs=115.9
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCC--CcEEEEEcccccccCC
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLT--DKVIVLHGRVEDVEID 176 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~--~~v~~~~~d~~~l~~~ 176 (428)
....+...+.. ++.+|||||||+|.++..+++.|. +|+|+|+| .+++.|++++...++. .+++++++|+.+++.+
T Consensus 71 ~~~~~~~~~~~-~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 148 (299)
T 3g2m_A 71 EAREFATRTGP-VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALD 148 (299)
T ss_dssp HHHHHHHHHCC-CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCS
T ss_pred HHHHHHHhhCC-CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcC
Confidence 33444444433 344999999999999999999976 89999999 9999999998876532 4699999999998888
Q ss_pred CceeEEEEecchhhhcc--hhhHHHHHHHHhcccccCeEEEccCCeeeEee---cCCccchh----hhhhhh--------
Q 014247 177 EEVDVIISEWMGYMLLY--ESMLGSVITARDRWLKRGGLILPSYATLYMAP---VTHPDRYS----ESIDFW-------- 239 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~--~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---~~~~~~~~----~~~~~~-------- 239 (428)
++||+|++.. ..+++ ..+...+++++.++|+|||++++......... ......+. ....+|
T Consensus 149 ~~fD~v~~~~--~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 226 (299)
T 3g2m_A 149 KRFGTVVISS--GSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEE 226 (299)
T ss_dssp CCEEEEEECH--HHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEE
T ss_pred CCcCEEEECC--cccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEecccc
Confidence 9999999743 12333 33578999999999999999998654322110 00000000 000000
Q ss_pred --------------------hccCCCCcchhHHHHHhcCCCCceEEeecC
Q 014247 240 --------------------RNVYGIDMSAMMPLAKQCAFEEPSVETITG 269 (428)
Q Consensus 240 --------------------~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~ 269 (428)
.....++..++..+++++||+...+..+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~ 276 (299)
T 3g2m_A 227 IQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFAS 276 (299)
T ss_dssp EEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECT
T ss_pred EEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCC
Confidence 012245788999999999999888776653
No 41
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.67 E-value=5.4e-16 Score=147.79 Aligned_cols=158 Identities=19% Similarity=0.182 Sum_probs=115.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC--CCceeEEEEecc
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--DEEVDVIISEWM 187 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--~~~~DlVvs~~~ 187 (428)
.++.+|||||||+|.++..+++.+..+|+|+|++ .+++.|++++...++..++.++++|+.++++ +++||+|++...
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 6788999999999999999988877799999999 9999999999888877789999999998765 478999999753
Q ss_pred hhh-hcchhhHHHHHHHHhcccccCeEEEccCCeee----------------EeecCCccchh----hhhhhh--h----
Q 014247 188 GYM-LLYESMLGSVITARDRWLKRGGLILPSYATLY----------------MAPVTHPDRYS----ESIDFW--R---- 240 (428)
Q Consensus 188 ~~~-l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~----------------~~~~~~~~~~~----~~~~~~--~---- 240 (428)
.+. +.+..++..+++++.++|+|||.+++..++.. ........... ....++ .
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 222 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNN 222 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSS
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcC
Confidence 222 24467789999999999999999997654321 00000000000 000000 0
Q ss_pred -ccCCCCcchhHHHHHhcCCCCceEEeec
Q 014247 241 -NVYGIDMSAMMPLAKQCAFEEPSVETIT 268 (428)
Q Consensus 241 -~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 268 (428)
..+.++...+..+++++||+.+.+..+.
T Consensus 223 ~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 223 CIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp EEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred CcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 0133567899999999999987776554
No 42
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.66 E-value=1e-16 Score=150.67 Aligned_cols=151 Identities=13% Similarity=0.131 Sum_probs=107.5
Q ss_pred CCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCC----------------------------
Q 014247 109 SFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNL---------------------------- 159 (428)
Q Consensus 109 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~---------------------------- 159 (428)
...++.+|||||||+|.++..++..|+.+|+|+|+| .|++.|+++++.+..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 446788999999999999888888888789999999 999999987655321
Q ss_pred CCcEE-EEEcccccc-cC----CCceeEEEEecchhhh-cchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccch
Q 014247 160 TDKVI-VLHGRVEDV-EI----DEEVDVIISEWMGYML-LYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRY 232 (428)
Q Consensus 160 ~~~v~-~~~~d~~~l-~~----~~~~DlVvs~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~ 232 (428)
..++. ++++|+.+. ++ .++||+|++..+.+.+ ....++..+++++.++|||||.+++... ... ..+
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~------~~~-~~~ 204 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT------LRL-PSY 204 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE------SSC-CEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe------ecC-ccc
Confidence 01244 889999874 22 3689999997743332 2345678999999999999999998631 110 011
Q ss_pred hhhhhhhhccCCCCcchhHHHHHhcCCCCceEEee
Q 014247 233 SESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 233 ~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 267 (428)
......| ..+.++.+.+..++.++||+...+...
T Consensus 205 ~~g~~~~-~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 205 MVGKREF-SCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp EETTEEE-ECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred eeCCeEe-eccccCHHHHHHHHHHCCCEEEEEeec
Confidence 0000001 124567889999999999998776655
No 43
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.66 E-value=4.8e-16 Score=143.94 Aligned_cols=144 Identities=15% Similarity=0.142 Sum_probs=108.4
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-CceeEEEEecchh
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEVDVIISEWMGY 189 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~~~~ 189 (428)
++.+|||||||+|.++..+++.+..+|+|+|++ .+++.|++++...+ ..++.++.+|+.+++.+ ++||+|++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~--- 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQW--- 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEES---
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcc---
Confidence 578999999999999999988876699999999 99999998876654 23589999999988765 5899999976
Q ss_pred hhcchhh--HHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCCCCceEEee
Q 014247 190 MLLYESM--LGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 190 ~l~~~~~--~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 267 (428)
.+.+..+ ...+++++.++|+|||++++....... ...+... ...+..+...+..+++++||+...+...
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-----~~~~~~~----~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE-----GVILDDV----DSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS-----SEEEETT----TTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC-----cceeccc----CCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 4444444 568999999999999999975432110 1111110 0112236778999999999998776654
Q ss_pred c
Q 014247 268 T 268 (428)
Q Consensus 268 ~ 268 (428)
.
T Consensus 226 ~ 226 (241)
T 2ex4_A 226 E 226 (241)
T ss_dssp C
T ss_pred C
Confidence 3
No 44
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.66 E-value=6.2e-16 Score=142.89 Aligned_cols=154 Identities=17% Similarity=0.148 Sum_probs=114.6
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID- 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~- 176 (428)
.+.+.+...+ .++.+|||||||+|.++..+++.+. +|+|+|++ .+++.|+++. ...+++++++|+.+++.+
T Consensus 42 ~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~ 114 (242)
T 3l8d_A 42 TIIPFFEQYV--KKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFEN 114 (242)
T ss_dssp THHHHHHHHS--CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCT
T ss_pred HHHHHHHHHc--CCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCC
Confidence 3455555554 4788999999999999999999976 89999999 8998887653 235699999999998764
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhh---ccCCCCcchhHHH
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWR---NVYGIDMSAMMPL 253 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~ 253 (428)
++||+|++.. .+++..++..+++++.++|+|||.+++....... ..........+. ....++...+..+
T Consensus 115 ~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (242)
T 3l8d_A 115 EQFEAIMAIN---SLEWTEEPLRALNEIKRVLKSDGYACIAILGPTA-----KPRENSYPRLYGKDVVCNTMMPWEFEQL 186 (242)
T ss_dssp TCEEEEEEES---CTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTC-----GGGGGGGGGGGTCCCSSCCCCHHHHHHH
T ss_pred CCccEEEEcC---hHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcc-----hhhhhhhhhhccccccccCCCHHHHHHH
Confidence 8999999865 6667778899999999999999999876422110 011011111111 1234567789999
Q ss_pred HHhcCCCCceEEee
Q 014247 254 AKQCAFEEPSVETI 267 (428)
Q Consensus 254 l~~~Gf~~~~~~~~ 267 (428)
++++||+......+
T Consensus 187 l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 187 VKEQGFKVVDGIGV 200 (242)
T ss_dssp HHHTTEEEEEEEEE
T ss_pred HHHcCCEEEEeecc
Confidence 99999998776644
No 45
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.65 E-value=2e-15 Score=141.16 Aligned_cols=158 Identities=18% Similarity=0.221 Sum_probs=111.1
Q ss_pred HHHHHHHHh-ccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC
Q 014247 98 ETYRAAIMQ-NQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI 175 (428)
Q Consensus 98 ~~~~~~i~~-~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~ 175 (428)
+.+.+.+.. .....++.+|||||||+|.++..+++.+. +|+|+|+| .+++.|++++ .+...++.++.+|+.++++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~~~~ 100 (263)
T 2yqz_A 24 GQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARAIPL 100 (263)
T ss_dssp HHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTSCCS
T ss_pred HHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh--hccCCceEEEEcccccCCC
Confidence 344444433 22446788999999999999999999865 89999999 9999998887 2333569999999998876
Q ss_pred C-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCc-----cchhhhhhhhh-----ccCC
Q 014247 176 D-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHP-----DRYSESIDFWR-----NVYG 244 (428)
Q Consensus 176 ~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~-----~~~~~~~~~~~-----~~~~ 244 (428)
+ ++||+|++.. .+++..+...+++++.++|+|||.+++. +..+-... ..+........ ....
T Consensus 101 ~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (263)
T 2yqz_A 101 PDESVHGVIVVH---LWHLVPDWPKVLAEAIRVLKPGGALLEG----WDQAEASPEWTLQERWRAFAAEEGFPVERGLHA 173 (263)
T ss_dssp CTTCEEEEEEES---CGGGCTTHHHHHHHHHHHEEEEEEEEEE----EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHH
T ss_pred CCCCeeEEEECC---chhhcCCHHHHHHHHHHHCCCCcEEEEE----ecCCCccHHHHHHHHHHHHHHHhCCCccccccc
Confidence 4 7899999866 5666667899999999999999999876 22110011 00111111000 0012
Q ss_pred CCcchhHHHHHhcCCCCceEE
Q 014247 245 IDMSAMMPLAKQCAFEEPSVE 265 (428)
Q Consensus 245 ~~~~~l~~~l~~~Gf~~~~~~ 265 (428)
++...+..+++++||+...+.
T Consensus 174 ~~~~~~~~~l~~~Gf~~~~~~ 194 (263)
T 2yqz_A 174 KRLKEVEEALRRLGLKPRTRE 194 (263)
T ss_dssp HHHHHHHHHHHHTTCCCEEEE
T ss_pred CCHHHHHHHHHHcCCCcceEE
Confidence 345677888999999976543
No 46
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.65 E-value=5e-16 Score=148.31 Aligned_cols=153 Identities=15% Similarity=0.194 Sum_probs=105.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCC----------------------------
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLT---------------------------- 160 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~---------------------------- 160 (428)
.++++|||||||+|.++..+++. +..+|+|+|++ .+++.|++++...+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 46899999999999999999997 55699999999 9999999876654422
Q ss_pred -----------------------------CcEEEEEccccccc------CCCceeEEEEecchhhhc---chhhHHHHHH
Q 014247 161 -----------------------------DKVIVLHGRVEDVE------IDEEVDVIISEWMGYMLL---YESMLGSVIT 202 (428)
Q Consensus 161 -----------------------------~~v~~~~~d~~~l~------~~~~~DlVvs~~~~~~l~---~~~~~~~~l~ 202 (428)
++|+|+++|+.... ..++||+|+|..+...++ ....+..+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 57999999987644 348999999976432232 3446889999
Q ss_pred HHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHh--cCCCCceEE
Q 014247 203 ARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQ--CAFEEPSVE 265 (428)
Q Consensus 203 ~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~Gf~~~~~~ 265 (428)
++.++|+|||+|++....+.... ............+ ....+....+..++.+ +||+..++.
T Consensus 205 ~~~~~LkpGG~lil~~~~~~~y~-~~~~~~~~~~~~~-~~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWSSYG-KRKTLTETIYKNY-YRIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHHHHH-TTTTSCHHHHHHH-HHCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHHhCCCcEEEEecCCchhhh-hhhcccHHHHhhh-hcEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 99999999999997643221000 0000001111111 1234557889999998 999865443
No 47
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.64 E-value=2.6e-16 Score=142.19 Aligned_cols=144 Identities=9% Similarity=0.012 Sum_probs=101.8
Q ss_pred CCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCC-----------CCCcEEEEEcccccccCC
Q 014247 109 SFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANN-----------LTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 109 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~-----------~~~~v~~~~~d~~~l~~~ 176 (428)
...++.+|||+|||+|..+..+++.|+ +|+|+|+| .|++.|+++..... ...+++++++|+.+++.+
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 346788999999999999999999987 89999999 99999988754210 124699999999998764
Q ss_pred --CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHH
Q 014247 177 --EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLA 254 (428)
Q Consensus 177 --~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 254 (428)
++||+|++....+.+ ...+...+++++.++|||||++++.... .. ... .....+.++.+++..++
T Consensus 98 ~~~~fD~v~~~~~l~~l-~~~~~~~~l~~~~r~LkpgG~~~l~~~~-----~~-~~~------~~~~~~~~~~~el~~~~ 164 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIAL-PADMRERYVQHLEALMPQACSGLLITLE-----YD-QAL------LEGPPFSVPQTWLHRVM 164 (203)
T ss_dssp HHHSEEEEEEESCGGGS-CHHHHHHHHHHHHHHSCSEEEEEEEEES-----SC-SSS------SSSCCCCCCHHHHHHTS
T ss_pred cCCCEEEEEECcchhhC-CHHHHHHHHHHHHHHcCCCcEEEEEEEe-----cC-ccc------cCCCCCCCCHHHHHHHh
Confidence 689999986532222 2345678999999999999984432111 00 000 00112345667788877
Q ss_pred HhcCCCCceEEee
Q 014247 255 KQCAFEEPSVETI 267 (428)
Q Consensus 255 ~~~Gf~~~~~~~~ 267 (428)
.+ ||+...++..
T Consensus 165 ~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 165 SG-NWEVTKVGGQ 176 (203)
T ss_dssp CS-SEEEEEEEES
T ss_pred cC-CcEEEEeccc
Confidence 77 8876555443
No 48
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.64 E-value=1.1e-15 Score=141.13 Aligned_cols=161 Identities=19% Similarity=0.272 Sum_probs=114.9
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-Cce
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEV 179 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~ 179 (428)
..+...+...++.+|||||||+|.++..+++.+..+|+|+|++ .+++.|+++... .+++++++|+.+++.+ ++|
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCE
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCc
Confidence 3455666667889999999999999999999877699999999 999888776432 3699999999988764 789
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCc--------------cch-h---hhhhhhh-
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHP--------------DRY-S---ESIDFWR- 240 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~--------------~~~-~---~~~~~~~- 240 (428)
|+|++.. .+++..++..+++++.++|+|||.+++............. ..+ . ....+..
T Consensus 109 D~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (243)
T 3bkw_A 109 DLAYSSL---ALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAK 185 (243)
T ss_dssp EEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHH
T ss_pred eEEEEec---cccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccC
Confidence 9999865 5566667899999999999999999876432110000000 000 0 0000000
Q ss_pred --ccCCCCcchhHHHHHhcCCCCceEEeecC
Q 014247 241 --NVYGIDMSAMMPLAKQCAFEEPSVETITG 269 (428)
Q Consensus 241 --~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~ 269 (428)
..+.++.+.+..+++++||+...+....+
T Consensus 186 ~~~~~~~t~~~~~~~l~~aGF~~~~~~~~~~ 216 (243)
T 3bkw_A 186 GVVKHHRTVGTTLNALIRSGFAIEHVEEFCP 216 (243)
T ss_dssp SCCEEECCHHHHHHHHHHTTCEEEEEEECCC
T ss_pred ceEEEeccHHHHHHHHHHcCCEeeeeccCCC
Confidence 11224678899999999999877765433
No 49
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.64 E-value=2e-15 Score=137.12 Aligned_cols=117 Identities=16% Similarity=0.130 Sum_probs=95.0
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
..+...+...+...++.+|||||||+|.++..+++.+. +|+|+|++ .+++.|++++...+ +++++++|+.+++.+
T Consensus 37 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~ 112 (216)
T 3ofk_A 37 ERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFSTA 112 (216)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCCCS
T ss_pred HHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCCCC
Confidence 35566666666667888999999999999999999875 99999999 99999998876532 699999999998867
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++||+|++..+.+.+.....+..+++++.++|+|||.+++..
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 899999997633333333345678999999999999999753
No 50
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.63 E-value=8e-16 Score=140.13 Aligned_cols=141 Identities=20% Similarity=0.309 Sum_probs=105.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.++.+|||||||+|.++..+++.+. +|+|+|++ .+++.|++++. .+++++++|+.+++.+++||+|++..
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~~~fD~v~~~~--- 114 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVPTSIDTIVSTY--- 114 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCCSCCSEEEEES---
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCCCCeEEEEECc---
Confidence 4788999999999999999999866 99999999 99998887753 45899999999987778999999976
Q ss_pred hhcchhhHHH--HHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhh------------hhccCCCCcchhHHHHH
Q 014247 190 MLLYESMLGS--VITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDF------------WRNVYGIDMSAMMPLAK 255 (428)
Q Consensus 190 ~l~~~~~~~~--~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~l~ 255 (428)
.+++..+... +++++.++|||||.+++..... ............ ....+.++.+.+..+++
T Consensus 115 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 189 (220)
T 3hnr_A 115 AFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF-----ADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFE 189 (220)
T ss_dssp CGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB-----SSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHH
T ss_pred chhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc-----cChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHH
Confidence 5556555555 9999999999999999764221 111111110000 11123446789999999
Q ss_pred hcCCCCceEE
Q 014247 256 QCAFEEPSVE 265 (428)
Q Consensus 256 ~~Gf~~~~~~ 265 (428)
++||+.....
T Consensus 190 ~aGf~v~~~~ 199 (220)
T 3hnr_A 190 NNGFHVTFTR 199 (220)
T ss_dssp HTTEEEEEEE
T ss_pred HCCCEEEEee
Confidence 9999765444
No 51
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.63 E-value=2.3e-15 Score=136.57 Aligned_cols=144 Identities=15% Similarity=0.060 Sum_probs=101.9
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecch
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMG 188 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~ 188 (428)
..++.+|||||||+|.++..+++.+. +|+|+|++ .+++.|++ .+. .+++++++|+.++..+++||+|++..
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~~~~~~D~v~~~~-- 115 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWTPDRQWDAVFFAH-- 115 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCCCSSCEEEEEEES--
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCCCCCceeEEEEec--
Confidence 46778999999999999999999866 99999999 89988876 344 35999999999884458999999976
Q ss_pred hhhcchhh--HHHHHHHHhcccccCeEEEccCCeeeEee---cCC---ccc----hhhhhhhhhccCCCCcchhHHHHHh
Q 014247 189 YMLLYESM--LGSVITARDRWLKRGGLILPSYATLYMAP---VTH---PDR----YSESIDFWRNVYGIDMSAMMPLAKQ 256 (428)
Q Consensus 189 ~~l~~~~~--~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---~~~---~~~----~~~~~~~~~~~~~~~~~~l~~~l~~ 256 (428)
.+++..+ ...+++++.++|+|||.+++......... ... ... ......++.....++...+..++++
T Consensus 116 -~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 194 (218)
T 3ou2_A 116 -WLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTA 194 (218)
T ss_dssp -CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHH
T ss_pred -hhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHH
Confidence 4555444 58999999999999999987643221000 000 000 0000000101123467889999999
Q ss_pred cCCCCc
Q 014247 257 CAFEEP 262 (428)
Q Consensus 257 ~Gf~~~ 262 (428)
+||+..
T Consensus 195 aGf~v~ 200 (218)
T 3ou2_A 195 LGWSCS 200 (218)
T ss_dssp TTEEEE
T ss_pred CCCEEE
Confidence 999843
No 52
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.63 E-value=1.3e-15 Score=135.66 Aligned_cols=104 Identities=20% Similarity=0.305 Sum_probs=89.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--C-CCceeEEEEec
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--I-DEEVDVIISEW 186 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~-~~~~DlVvs~~ 186 (428)
.++.+|||+|||+|.++..+++.++.+|+|+|++ .+++.|++++..+++ ++++++++|+.++. . .++||+|+++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 5788999999999999998888888899999999 999999999999888 56999999998864 2 48999999976
Q ss_pred chhhhcc-hhhHHHHHHHHhc--ccccCeEEEccC
Q 014247 187 MGYMLLY-ESMLGSVITARDR--WLKRGGLILPSY 218 (428)
Q Consensus 187 ~~~~l~~-~~~~~~~l~~~~~--~LkpgG~lv~~~ 218 (428)
. +.+ ..+...++..+.+ +|+|||++++..
T Consensus 122 p---~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 122 P---YNVDSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp C---TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred C---CCcchhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 3 333 3568889999988 999999999754
No 53
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.63 E-value=3.3e-15 Score=137.99 Aligned_cols=115 Identities=26% Similarity=0.333 Sum_probs=94.0
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC
Q 014247 97 TETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI 175 (428)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~ 175 (428)
...+.+.+...+ .++.+|||+|||+|.++..+++. .+|+|+|++ .+++.|++++..++ .+++++++|+.+++.
T Consensus 20 ~~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~ 93 (243)
T 3d2l_A 20 YPEWVAWVLEQV--EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELEL 93 (243)
T ss_dssp HHHHHHHHHHHS--CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCC
T ss_pred HHHHHHHHHHHc--CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCC
Confidence 345666676665 45689999999999999999987 599999999 99999999988765 358999999999877
Q ss_pred CCceeEEEEec-chhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEW-MGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~-~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+++||+|++.. ..+.+....++..+++++.++|+|||.+++.
T Consensus 94 ~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 94 PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 78999999853 2223333467889999999999999999874
No 54
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.62 E-value=1.4e-15 Score=142.55 Aligned_cols=111 Identities=16% Similarity=0.227 Sum_probs=89.2
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE 177 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~ 177 (428)
.+.+.+.... .++.+|||||||+|.++..+++.+. +|+|+|+| .+++.|+++.. +++++++|+.+++.++
T Consensus 39 ~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~~~ 109 (263)
T 3pfg_A 39 DLAALVRRHS--PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSLGR 109 (263)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCCSC
T ss_pred HHHHHHHhhC--CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCccC
Confidence 3344444443 4568999999999999999999876 89999999 99999887642 5899999999988789
Q ss_pred ceeEEEEec-chhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 178 EVDVIISEW-MGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 178 ~~DlVvs~~-~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+||+|++.. ..+.+....++..+++++.++|+|||.+++..
T Consensus 110 ~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 110 RFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp CEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999999864 33333333568899999999999999999863
No 55
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.62 E-value=1.6e-15 Score=140.34 Aligned_cols=139 Identities=14% Similarity=0.208 Sum_probs=106.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc--cCC-CceeEEEEec
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV--EID-EEVDVIISEW 186 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l--~~~-~~~DlVvs~~ 186 (428)
.++.+|||||||+|.++..+++.|. +|+|+|+| .+++.|+++ +.++.+|+.+. +++ ++||+|++..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~~ 109 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMISH 109 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEES
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEECC
Confidence 5678999999999999999999877 79999999 898887654 78899998875 443 8999999976
Q ss_pred chhhhcchh--hHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhh---hccCCCCcchhHHHHHhcCCCC
Q 014247 187 MGYMLLYES--MLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFW---RNVYGIDMSAMMPLAKQCAFEE 261 (428)
Q Consensus 187 ~~~~l~~~~--~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~~Gf~~ 261 (428)
++++.. ++..+++++.++|||||.+++..... ........+| .....++...+..+++++||+.
T Consensus 110 ---~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 178 (240)
T 3dli_A 110 ---FVEHLDPERLFELLSLCYSKMKYSSYIVIESPNP--------TSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRD 178 (240)
T ss_dssp ---CGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECT--------TSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEE
T ss_pred ---chhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCc--------chhHHHHHHhcCccccccCCHHHHHHHHHHCCCeE
Confidence 444444 57999999999999999998754321 1111111222 2235567789999999999998
Q ss_pred ceEEeecCC
Q 014247 262 PSVETITGE 270 (428)
Q Consensus 262 ~~~~~~~~~ 270 (428)
..+..+.+.
T Consensus 179 ~~~~~~~~~ 187 (240)
T 3dli_A 179 VKIEFFEEC 187 (240)
T ss_dssp EEEEEECCC
T ss_pred EEEEEeccC
Confidence 887776653
No 56
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.62 E-value=5.2e-16 Score=145.61 Aligned_cols=151 Identities=21% Similarity=0.163 Sum_probs=110.1
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID- 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~- 176 (428)
.+.+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+| .+++.|+++. +++++++|+.+++++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~ 92 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPD 92 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCT
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCC
Confidence 4566677776667889999999999999999999765 99999999 8887665432 599999999998875
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchh-----hhhhhhhccCCCCcchhH
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYS-----ESIDFWRNVYGIDMSAMM 251 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~ 251 (428)
++||+|++.. .+++..++..+++++.++|| ||.+++...... .....|. .....+ .....+...+.
T Consensus 93 ~~fD~v~~~~---~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 163 (261)
T 3ege_A 93 KSVDGVISIL---AIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIR----LAQRIWLYDYFPFLWEDA-LRFLPLDEQIN 163 (261)
T ss_dssp TCBSEEEEES---CGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGG----GCCCCGGGGTCHHHHHHH-HTSCCHHHHHH
T ss_pred CCEeEEEEcc---hHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCc----hhHHHHHHHHHHHHhhhh-hhhCCCHHHHH
Confidence 8999999976 56666789999999999999 997765432210 0011111 111111 12233456677
Q ss_pred HHHHhcCCCCceEEee
Q 014247 252 PLAKQCAFEEPSVETI 267 (428)
Q Consensus 252 ~~l~~~Gf~~~~~~~~ 267 (428)
+++++||..+.+..+
T Consensus 164 -~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 164 -LLQENTKRRVEAIPF 178 (261)
T ss_dssp -HHHHHHCSEEEEEEC
T ss_pred -HHHHcCCCceeEEEe
Confidence 999999998776654
No 57
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.62 E-value=6e-15 Score=135.29 Aligned_cols=148 Identities=18% Similarity=0.216 Sum_probs=109.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCC----CCcEEEEEcccccccCC-CceeEEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNL----TDKVIVLHGRVEDVEID-EEVDVIIS 184 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~----~~~v~~~~~d~~~l~~~-~~~DlVvs 184 (428)
.++.+|||+|||+|.++..+++.+. +|+|+|++ .+++.|++++...++ ..++.++.+|+.+++.+ ++||+|++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 4788999999999999999999966 99999999 999999998877666 34689999999988764 88999999
Q ss_pred ecchhhhcchhhHH---HHHHHHhcccccCeEEEccCCeeeEeecCCccchhhh-hhhh--------------------h
Q 014247 185 EWMGYMLLYESMLG---SVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSES-IDFW--------------------R 240 (428)
Q Consensus 185 ~~~~~~l~~~~~~~---~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~-~~~~--------------------~ 240 (428)
.. .+.+..+.. .+++++.++|+|||.+++...... .....+... ...+ .
T Consensus 108 ~~---~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (235)
T 3sm3_A 108 QA---FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN----WHLKLYRKRYLHDFPITKEEGSFLARDPETGETEF 180 (235)
T ss_dssp ES---CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC----TTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEE
T ss_pred cc---hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc----hhHHHHHHHhhhhccchhhhcceEecccccCCcce
Confidence 76 444444444 899999999999999987542210 000000000 0000 0
Q ss_pred ccCCCCcchhHHHHHhcCCCCceEEe
Q 014247 241 NVYGIDMSAMMPLAKQCAFEEPSVET 266 (428)
Q Consensus 241 ~~~~~~~~~l~~~l~~~Gf~~~~~~~ 266 (428)
..+.++.+.+..+++++||+...+..
T Consensus 181 ~~~~~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 181 IAHHFTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp EEECBCHHHHHHHHHTTTEEEEEEEE
T ss_pred eeEeCCHHHHHHHHHHcCCEEEEEEe
Confidence 12346788999999999998876554
No 58
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.61 E-value=2.1e-15 Score=142.85 Aligned_cols=151 Identities=19% Similarity=0.256 Sum_probs=110.5
Q ss_pred HHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEE
Q 014247 104 IMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVI 182 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlV 182 (428)
+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+| .|++.|+++. .++.++.+|+.+++++++||+|
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD~v 121 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVDKPLDAV 121 (279)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCSSCEEEE
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcCCCcCEE
Confidence 33444556788999999999999999999655 99999999 9999888764 3589999999998877899999
Q ss_pred EEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhh-----h------hccCCCCcchhH
Q 014247 183 ISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDF-----W------RNVYGIDMSAMM 251 (428)
Q Consensus 183 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~~l~ 251 (428)
++.. .+++..++..+++++.++|+|||.+++..... -............ | .....++...+.
T Consensus 122 ~~~~---~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (279)
T 3ccf_A 122 FSNA---MLHWVKEPEAAIASIHQALKSGGRFVAEFGGK----GNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYV 194 (279)
T ss_dssp EEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT----TTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHH
T ss_pred EEcc---hhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC----cchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHH
Confidence 9976 56666788999999999999999998753211 0000110000000 0 011234677899
Q ss_pred HHHHhcCCCCceEEeec
Q 014247 252 PLAKQCAFEEPSVETIT 268 (428)
Q Consensus 252 ~~l~~~Gf~~~~~~~~~ 268 (428)
.+++++||+...+....
T Consensus 195 ~~l~~aGf~~~~~~~~~ 211 (279)
T 3ccf_A 195 NILEKQGFDVTYAALFN 211 (279)
T ss_dssp HHHHHHTEEEEEEEEEE
T ss_pred HHHHHcCCEEEEEEEec
Confidence 99999999987766543
No 59
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.61 E-value=1.1e-15 Score=145.68 Aligned_cols=122 Identities=24% Similarity=0.269 Sum_probs=98.2
Q ss_pred hhhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCC---CcEEEEEcc
Q 014247 94 RVRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLT---DKVIVLHGR 169 (428)
Q Consensus 94 ~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~---~~v~~~~~d 169 (428)
..+...+.+.+...+...++.+|||||||+|.++..+++.|+ +|+|+|+| .+++.|++++...+.. .++.+..+|
T Consensus 39 ~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d 117 (293)
T 3thr_A 39 RSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEAN 117 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC
T ss_pred cchHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecC
Confidence 445567777777776666789999999999999999999977 99999999 9999998876544322 358899999
Q ss_pred ccccc---C-CCceeEEEEecchhhhcchhh-------HHHHHHHHhcccccCeEEEccC
Q 014247 170 VEDVE---I-DEEVDVIISEWMGYMLLYESM-------LGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 170 ~~~l~---~-~~~~DlVvs~~~~~~l~~~~~-------~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+.+++ + +++||+|++. +..+.+..+ +..+++++.++|||||++++..
T Consensus 118 ~~~~~~~~~~~~~fD~V~~~--g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 118 WLTLDKDVPAGDGFDAVICL--GNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp GGGHHHHSCCTTCEEEEEEC--TTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhCccccccCCCeEEEEEc--ChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 98876 3 4899999995 124444444 8999999999999999999754
No 60
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=5.6e-16 Score=143.32 Aligned_cols=116 Identities=22% Similarity=0.259 Sum_probs=92.2
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--C
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--I 175 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~ 175 (428)
.+.+++.+.+ ..+|.+|||||||+|..+..+++.+..+|+|||++ .+++.|+++....+. ++.++.+|+.++. +
T Consensus 48 ~~m~~~a~~~-~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~a~~~~~~~ 124 (236)
T 3orh_A 48 PYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDVAPTL 124 (236)
T ss_dssp HHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHHGGGS
T ss_pred HHHHHHHHhh-ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeehHHhhcccc
Confidence 3444444443 26788999999999999999998866699999999 999999998877654 5889999987753 2
Q ss_pred -CCceeEEEEecc--hhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 -DEEVDVIISEWM--GYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 -~~~~DlVvs~~~--~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.++||.|+...+ ...+.+..+...+++++.|+|||||++++.
T Consensus 125 ~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 125 PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 378999987542 334556678999999999999999999864
No 61
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.61 E-value=6.6e-15 Score=140.43 Aligned_cols=143 Identities=13% Similarity=0.120 Sum_probs=97.8
Q ss_pred CCCCEEEEEcCCCcHHHHHH----HHc-CCCeE--EEEeCh-HHHHHHHHHHHHC-CCCC-cEEEEEccccccc------
Q 014247 111 IEGKVVVDVGCGTGILSIFC----AQA-GAKRV--YAVDAS-DIAVQANEVVKAN-NLTD-KVIVLHGRVEDVE------ 174 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~l----a~~-g~~~V--~giD~s-~~~~~a~~~~~~~-~~~~-~v~~~~~d~~~l~------ 174 (428)
.++.+|||||||+|.++..+ +.. ....| +|+|+| +|++.|++++... ++.+ ++.+..+++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 45679999999999766432 222 22344 999999 9999999987653 3432 2344566666554
Q ss_pred C-CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhh-hhhhh------ccCCCC
Q 014247 175 I-DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSES-IDFWR------NVYGID 246 (428)
Q Consensus 175 ~-~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~ 246 (428)
+ +++||+|++.. .+++..++..++++++++|||||++++.... ....+... ..+|. ....++
T Consensus 131 ~~~~~fD~V~~~~---~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (292)
T 2aot_A 131 KELQKWDFIHMIQ---MLYYVKDIPATLKFFHSLLGTNAKMLIIVVS-------GSSGWDKLWKKYGSRFPQDDLCQYIT 200 (292)
T ss_dssp TCCCCEEEEEEES---CGGGCSCHHHHHHHHHHTEEEEEEEEEEEEC-------TTSHHHHHHHHHGGGSCCCTTCCCCC
T ss_pred cCCCceeEEEEee---eeeecCCHHHHHHHHHHHcCCCcEEEEEEec-------CCccHHHHHHHHHHhccCCCcccCCC
Confidence 2 47899999876 7788888999999999999999999875211 11111111 11221 123456
Q ss_pred cchhHHHHHhcCCCCce
Q 014247 247 MSAMMPLAKQCAFEEPS 263 (428)
Q Consensus 247 ~~~l~~~l~~~Gf~~~~ 263 (428)
...+..+++++||+...
T Consensus 201 ~~~~~~~l~~aGf~~~~ 217 (292)
T 2aot_A 201 SDDLTQMLDNLGLKYEC 217 (292)
T ss_dssp HHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHCCCceEE
Confidence 77899999999998654
No 62
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=1.2e-14 Score=135.22 Aligned_cols=110 Identities=26% Similarity=0.413 Sum_probs=91.2
Q ss_pred hccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEE
Q 014247 106 QNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIIS 184 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs 184 (428)
......++.+|||+|||+|.++..+++.|. +|+|+|+| .+++.|++++...+. ++.++++|+.+++.+++||+|++
T Consensus 35 ~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~fD~v~~ 111 (252)
T 1wzn_A 35 KEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFKNEFDAVTM 111 (252)
T ss_dssp HHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCCSCEEEEEE
T ss_pred HHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccCCCccEEEE
Confidence 333345678999999999999999999876 89999999 999999999887765 58999999999887789999998
Q ss_pred ecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 185 EWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 185 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
......+....++..+++++.++|+|||.+++..
T Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 112 FFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp CSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 5322233344568899999999999999998754
No 63
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.60 E-value=6.9e-15 Score=130.31 Aligned_cols=104 Identities=20% Similarity=0.262 Sum_probs=85.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--CCCceeEEEEecc
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--IDEEVDVIISEWM 187 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~~~~~DlVvs~~~ 187 (428)
.++.+|||+|||+|.++..+++. ..+|+|+|+| .+++.|++++..+++ +++++++++..++. .+++||+|+++.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~~- 97 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFNL- 97 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEEE-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEeC-
Confidence 67899999999999999999998 5599999999 999999999999888 56999998888753 257899999873
Q ss_pred hhhhc-------chhhHHHHHHHHhcccccCeEEEcc
Q 014247 188 GYMLL-------YESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 188 ~~~l~-------~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
++... .......+++++.++|||||++++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 22211 2345677889999999999999864
No 64
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.60 E-value=1e-15 Score=143.26 Aligned_cols=152 Identities=14% Similarity=0.170 Sum_probs=108.9
Q ss_pred CCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCC----------------------------
Q 014247 109 SFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNL---------------------------- 159 (428)
Q Consensus 109 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~---------------------------- 159 (428)
...++.+|||||||+|.++..+++.+..+|+|+|+| .+++.|++++..++.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 346778999999999999999998877789999999 999999888754321
Q ss_pred CCcE-EEEEcccccccC--C---CceeEEEEecchhhh-cchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccch
Q 014247 160 TDKV-IVLHGRVEDVEI--D---EEVDVIISEWMGYML-LYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRY 232 (428)
Q Consensus 160 ~~~v-~~~~~d~~~l~~--~---~~~DlVvs~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~ 232 (428)
..++ .++++|+.+... + ++||+|++....+.+ .+..++..+++++.++|||||.+++.... .. ..+
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~------~~-~~~ 205 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL------KS-SYY 205 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES------SC-CEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC------CC-ceE
Confidence 0127 999999988643 3 689999997622211 15567899999999999999999875411 10 011
Q ss_pred hhhhhhhhccCCCCcchhHHHHHhcCCCCceEEeec
Q 014247 233 SESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVETIT 268 (428)
Q Consensus 233 ~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 268 (428)
... ..-...+.++.+.+..+++++||+...+....
T Consensus 206 ~~~-~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 206 MIG-EQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp EET-TEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred EcC-CccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 000 00001234566789999999999987776554
No 65
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.60 E-value=7.3e-15 Score=145.64 Aligned_cols=151 Identities=19% Similarity=0.264 Sum_probs=111.7
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHC-----C-C-CCcEEEEEcccccc------
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKAN-----N-L-TDKVIVLHGRVEDV------ 173 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~-----~-~-~~~v~~~~~d~~~l------ 173 (428)
..++.+|||||||+|.++..+++. ...+|+|+|+| .+++.|++++..+ | + ..+++++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 357889999999999999999886 23499999999 9999999887654 3 2 24699999999987
Q ss_pred cCC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhcc--CCCCcchh
Q 014247 174 EID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNV--YGIDMSAM 250 (428)
Q Consensus 174 ~~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 250 (428)
+++ ++||+|+++. .+.+..++..+++++.++|||||++++...... .............|... ..+....+
T Consensus 161 ~~~~~~fD~V~~~~---~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
T 4fsd_A 161 GVPDSSVDIVISNC---VCNLSTNKLALFKEIHRVLRDGGELYFSDVYAD---RRLSEAAQQDPILYGECLGGALYLEDF 234 (383)
T ss_dssp CCCTTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEES---SCCCHHHHHCHHHHHTTCTTCCBHHHH
T ss_pred CCCCCCEEEEEEcc---chhcCCCHHHHHHHHHHHcCCCCEEEEEEeccc---cccCHhHhhhHHHhhcccccCCCHHHH
Confidence 554 7999999976 566667799999999999999999997643211 11111111111223221 23556889
Q ss_pred HHHHHhcCCCCceEEe
Q 014247 251 MPLAKQCAFEEPSVET 266 (428)
Q Consensus 251 ~~~l~~~Gf~~~~~~~ 266 (428)
..+++++||+.+.+..
T Consensus 235 ~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 235 RRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHTTCCCEEEEE
T ss_pred HHHHHHCCCceEEEEe
Confidence 9999999999876543
No 66
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.60 E-value=1.2e-14 Score=136.19 Aligned_cols=138 Identities=15% Similarity=0.246 Sum_probs=106.0
Q ss_pred hccCCC-CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---CCcee
Q 014247 106 QNQSFI-EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI---DEEVD 180 (428)
Q Consensus 106 ~~~~~~-~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~---~~~~D 180 (428)
..+... ++.+|||+|||+|.++..+++.+..+|+|+|++ .+++.|++++..+++.++++++++|+.++.. .++||
T Consensus 42 ~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 121 (259)
T 3lpm_A 42 KFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERAD 121 (259)
T ss_dssp HHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEE
T ss_pred HHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCcc
Confidence 334445 789999999999999999999866699999999 9999999999999999889999999998763 48999
Q ss_pred EEEEecchhhh-----c------------chhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccC
Q 014247 181 VIISEWMGYML-----L------------YESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVY 243 (428)
Q Consensus 181 lVvs~~~~~~l-----~------------~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (428)
+|++++..+.. . ....+..+++.+.++|+|||++++.. + .
T Consensus 122 ~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~------~---~-------------- 178 (259)
T 3lpm_A 122 IVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH------R---P-------------- 178 (259)
T ss_dssp EEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE------C---T--------------
T ss_pred EEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE------c---H--------------
Confidence 99998632111 0 01346789999999999999998621 1 0
Q ss_pred CCCcchhHHHHHhcCCCCceEEee
Q 014247 244 GIDMSAMMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 244 ~~~~~~l~~~l~~~Gf~~~~~~~~ 267 (428)
.....+...+.+.||....+..+
T Consensus 179 -~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 179 -ERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEEE
T ss_pred -HHHHHHHHHHHHCCCceEEEEEe
Confidence 12345666777888876665544
No 67
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.60 E-value=1e-14 Score=130.39 Aligned_cols=109 Identities=22% Similarity=0.322 Sum_probs=91.0
Q ss_pred HhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEE
Q 014247 105 MQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVII 183 (428)
Q Consensus 105 ~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVv 183 (428)
.+.+...++.+|||+|||+|.++..+++.+. +|+|+|++ .+++.|++++..+++.+ ++++.+|+.+++.+++||+|+
T Consensus 25 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~~~~~D~v~ 102 (199)
T 2xvm_A 25 LEAVKVVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLDN-LHTRVVDLNNLTFDRQYDFIL 102 (199)
T ss_dssp HHHTTTSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCTT-EEEEECCGGGCCCCCCEEEEE
T ss_pred HHHhhccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCCC-cEEEEcchhhCCCCCCceEEE
Confidence 3444456788999999999999999999866 99999999 99999999988887754 999999999887778999999
Q ss_pred EecchhhhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 184 SEWMGYMLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 184 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
+..+.+.+ ...+...+++++.++|+|||.+++
T Consensus 103 ~~~~l~~~-~~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 103 STVVLMFL-EAKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp EESCGGGS-CGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred EcchhhhC-CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 97632222 223689999999999999999775
No 68
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.60 E-value=1.3e-14 Score=130.75 Aligned_cols=112 Identities=21% Similarity=0.208 Sum_probs=93.1
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI- 175 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~- 175 (428)
..+..+...+...++.+|||+|||+|.++..+++.+ ..+|+|+|++ .+++.|++++..+++ ++++++++|+.+...
T Consensus 27 ~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~ 105 (204)
T 3e05_A 27 EVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDD 105 (204)
T ss_dssp HHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTT
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhc
Confidence 344555666677889999999999999999999985 4699999999 999999999998888 569999999866433
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.++||+|++... +. ++..+++++.++|+|||++++.
T Consensus 106 ~~~~D~i~~~~~---~~---~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 106 LPDPDRVFIGGS---GG---MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp SCCCSEEEESCC---TT---CHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCCEEEECCC---Cc---CHHHHHHHHHHhcCCCeEEEEE
Confidence 378999998652 21 5789999999999999999864
No 69
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=2.9e-15 Score=139.84 Aligned_cols=148 Identities=13% Similarity=0.154 Sum_probs=107.4
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCcee
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVD 180 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~D 180 (428)
.+...+...++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|+++ ..+++++.+|+.+++.+++||
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~fD 97 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWKPAQKAD 97 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCCCSSCEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcCccCCcC
Confidence 4555556677889999999999999999987 23489999999 999988876 135899999999887558999
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhh--hhhc---------cCCCCcch
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESID--FWRN---------VYGIDMSA 249 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~ 249 (428)
+|++.. .+++..++..+++++.++|+|||.+++........+. ...+..... .|.. ...++...
T Consensus 98 ~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (259)
T 2p35_A 98 LLYANA---VFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPT--HIAMHETADGGPWKDAFSGGGLRRKPLPPPSD 172 (259)
T ss_dssp EEEEES---CGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHH--HHHHHHHHHHSTTGGGC-------CCCCCHHH
T ss_pred EEEEeC---chhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHH--HHHHHHHhcCcchHHHhccccccccCCCCHHH
Confidence 999976 5666678999999999999999999976432110000 000111100 1221 12356778
Q ss_pred hHHHHHhcCCCC
Q 014247 250 MMPLAKQCAFEE 261 (428)
Q Consensus 250 l~~~l~~~Gf~~ 261 (428)
+..+++++||+.
T Consensus 173 ~~~~l~~aGf~v 184 (259)
T 2p35_A 173 YFNALSPKSSRV 184 (259)
T ss_dssp HHHHHGGGEEEE
T ss_pred HHHHHHhcCCce
Confidence 999999999963
No 70
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.59 E-value=1.7e-14 Score=129.60 Aligned_cols=140 Identities=17% Similarity=0.152 Sum_probs=105.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-CceeEEEEecch
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEVDVIISEWMG 188 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~~~ 188 (428)
.++ +|||||||+|.++..+++.|. +|+|+|++ .+++.|+++....+. ++.++++|+.+++++ ++||+|++..
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~-- 102 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSIF-- 102 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEEC--
T ss_pred CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEEh--
Confidence 456 999999999999999999876 99999999 999999999887766 599999999988765 7899999853
Q ss_pred hhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCCCCceEEe
Q 014247 189 YMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVET 266 (428)
Q Consensus 189 ~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 266 (428)
......++..+++++.++|+|||.+++...... ...+... ......+.++...+..+++ ||+...++.
T Consensus 103 -~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~ 170 (202)
T 2kw5_A 103 -CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE------QLQYNTG-GPKDLDLLPKLETLQSELP--SLNWLIANN 170 (202)
T ss_dssp -CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT------TGGGTSC-CSSSGGGCCCHHHHHHHCS--SSCEEEEEE
T ss_pred -hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc------cccCCCC-CCCcceeecCHHHHHHHhc--CceEEEEEE
Confidence 233456789999999999999999987543211 1101000 0011134567788888887 998766543
No 71
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.59 E-value=4.7e-15 Score=139.81 Aligned_cols=161 Identities=19% Similarity=0.188 Sum_probs=114.2
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CC-CeEEEEeCh-H------HHHHHHHHHHHCCCCCcEEEEEcc--
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GA-KRVYAVDAS-D------IAVQANEVVKANNLTDKVIVLHGR-- 169 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~-~~V~giD~s-~------~~~~a~~~~~~~~~~~~v~~~~~d-- 169 (428)
...+...+...++.+|||||||+|.++..+++. |. .+|+|+|+| . +++.|++++..+++.++++++.+|
T Consensus 32 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 111 (275)
T 3bkx_A 32 RLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNL 111 (275)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCT
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChh
Confidence 344455556678999999999999999999987 43 599999999 6 899999999888887789999998
Q ss_pred -cccccCC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhh----hhh-hh---
Q 014247 170 -VEDVEID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSE----SID-FW--- 239 (428)
Q Consensus 170 -~~~l~~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~----~~~-~~--- 239 (428)
...++++ ++||+|++.. .+++..+...+++.+.++++|||.+++....... ........ ... .+
T Consensus 112 ~~~~~~~~~~~fD~v~~~~---~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 185 (275)
T 3bkx_A 112 SDDLGPIADQHFDRVVLAH---SLWYFASANALALLFKNMAAVCDHVDVAEWSMQP---TALDQIGHLQAAMIQGLLYAI 185 (275)
T ss_dssp TTCCGGGTTCCCSEEEEES---CGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSC---SSGGGHHHHHHHHHHHHHHHH
T ss_pred hhccCCCCCCCEEEEEEcc---chhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCC---CchhhhhHHHHHHHHHHHhhc
Confidence 3444443 7899999976 5555666677788888888889999875432210 01111100 000 00
Q ss_pred -----hc-cCCCCcchhHHHHHhcCCCCceEEee
Q 014247 240 -----RN-VYGIDMSAMMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 240 -----~~-~~~~~~~~l~~~l~~~Gf~~~~~~~~ 267 (428)
.. ...++...+..+++++||+......+
T Consensus 186 ~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 186 APSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp SCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred cccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 01 12456788999999999988766555
No 72
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.59 E-value=2e-15 Score=137.67 Aligned_cols=151 Identities=18% Similarity=0.229 Sum_probs=106.3
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc---cC--
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV---EI-- 175 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l---~~-- 175 (428)
..+...+...++.+|||||||+|.++..+++.+. +|+|+|++ .+++.|+++ .++.++.+|+.++ +.
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~ 113 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPV 113 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCC
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-------cccccchhhHHhhccccccc
Confidence 3444444445679999999999999999999876 89999999 899888776 2478888888887 32
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecC-Cccchhhhhhhhh---------ccCCC
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVT-HPDRYSESIDFWR---------NVYGI 245 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~ 245 (428)
..+||+|++.. .++ ..++..+++++.++|+|||.+++........... ....+.. ..|. ..+.+
T Consensus 114 ~~~fD~v~~~~---~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 187 (227)
T 3e8s_A 114 GKDYDLICANF---ALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWRE--ESFAGFAGDWQPMPWYFR 187 (227)
T ss_dssp CCCEEEEEEES---CCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEE--ECCTTSSSCCCCEEEEEC
T ss_pred CCCccEEEECc---hhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccch--hhhhccccCcccceEEEe
Confidence 35699999976 444 5668899999999999999999865432211100 0000000 0011 11234
Q ss_pred CcchhHHHHHhcCCCCceEEe
Q 014247 246 DMSAMMPLAKQCAFEEPSVET 266 (428)
Q Consensus 246 ~~~~l~~~l~~~Gf~~~~~~~ 266 (428)
+.+.+..+++++||+...+..
T Consensus 188 ~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 188 TLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp CHHHHHHHHHHTTEEEEEEEC
T ss_pred cHHHHHHHHHHcCCeEEEEec
Confidence 678899999999998876654
No 73
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.59 E-value=3.1e-15 Score=138.13 Aligned_cols=115 Identities=20% Similarity=0.219 Sum_probs=89.4
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc--cCC-
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV--EID- 176 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l--~~~- 176 (428)
.+.+...+ ..++.+|||||||+|.++..+++.+..+|+|+|+| .|++.|+++....+ .+++++++|+.++ +++
T Consensus 50 ~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~ 126 (236)
T 1zx0_A 50 MHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPD 126 (236)
T ss_dssp HHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCT
T ss_pred HHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCC
Confidence 33443333 35778999999999999999988766699999999 99999999877655 4699999999988 664
Q ss_pred CceeEEEEecch--hhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 177 EEVDVIISEWMG--YMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 177 ~~~DlVvs~~~~--~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++||+|+++.+. ....+......+++++.++|||||++++..
T Consensus 127 ~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 127 GHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp TCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 789999983211 112233456688999999999999998654
No 74
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.59 E-value=1.2e-14 Score=130.93 Aligned_cols=135 Identities=23% Similarity=0.291 Sum_probs=106.1
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE 177 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~ 177 (428)
...+.+...+ .++.+|||+|||+|.++..+++.+..+|+|+|++ .+++.|++++..+++.+ ++++++|+.+.. ++
T Consensus 49 ~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~-~~ 124 (205)
T 3grz_A 49 LAMLGIERAM--VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV-DG 124 (205)
T ss_dssp HHHHHHHHHC--SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC-CS
T ss_pred HHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC-CC
Confidence 3444444443 5788999999999999999999877799999999 99999999999998876 999999997753 48
Q ss_pred ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhc
Q 014247 178 EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQC 257 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 257 (428)
+||+|+++.. + ..+..+++++.++|+|||.+++..... -+...+..+++++
T Consensus 125 ~fD~i~~~~~---~---~~~~~~l~~~~~~L~~gG~l~~~~~~~-----------------------~~~~~~~~~~~~~ 175 (205)
T 3grz_A 125 KFDLIVANIL---A---EILLDLIPQLDSHLNEDGQVIFSGIDY-----------------------LQLPKIEQALAEN 175 (205)
T ss_dssp CEEEEEEESC---H---HHHHHHGGGSGGGEEEEEEEEEEEEEG-----------------------GGHHHHHHHHHHT
T ss_pred CceEEEECCc---H---HHHHHHHHHHHHhcCCCCEEEEEecCc-----------------------ccHHHHHHHHHHc
Confidence 9999999752 2 235788999999999999998642110 1245677788899
Q ss_pred CCCCceEEe
Q 014247 258 AFEEPSVET 266 (428)
Q Consensus 258 Gf~~~~~~~ 266 (428)
||+...+..
T Consensus 176 Gf~~~~~~~ 184 (205)
T 3grz_A 176 SFQIDLKMR 184 (205)
T ss_dssp TEEEEEEEE
T ss_pred CCceEEeec
Confidence 998765543
No 75
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.59 E-value=1.5e-14 Score=130.64 Aligned_cols=110 Identities=15% Similarity=0.196 Sum_probs=91.5
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-ccCCC
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-VEIDE 177 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-l~~~~ 177 (428)
....+...+...++.+|||+|||+|.++..+++. ..+|+|+|++ .+++.|+++++.+++.++++++++|+.+ ++...
T Consensus 43 ~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 121 (204)
T 3njr_A 43 MRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLP 121 (204)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSC
T ss_pred HHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCC
Confidence 3444555556678899999999999999999998 4599999999 9999999999999998679999999988 44346
Q ss_pred ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 178 EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+||+|++.. .+ +.+ +++++.++|+|||++++..
T Consensus 122 ~~D~v~~~~---~~----~~~-~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 122 LPEAVFIGG---GG----SQA-LYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp CCSEEEECS---CC----CHH-HHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEECC---cc----cHH-HHHHHHHhcCCCcEEEEEe
Confidence 899999854 22 355 8999999999999998653
No 76
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.58 E-value=5.4e-15 Score=140.74 Aligned_cols=147 Identities=14% Similarity=0.163 Sum_probs=102.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHC-----------------CCC------------
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKAN-----------------NLT------------ 160 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~-----------------~~~------------ 160 (428)
.++.+|||||||+|.++..++..+..+|+|+|+| .|++.|++++... +..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 4778999999999997666655444599999999 9999988865421 100
Q ss_pred CcEEEEEccccc-ccC------CCceeEEEEecchhhhcc----hhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCc
Q 014247 161 DKVIVLHGRVED-VEI------DEEVDVIISEWMGYMLLY----ESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHP 229 (428)
Q Consensus 161 ~~v~~~~~d~~~-l~~------~~~~DlVvs~~~~~~l~~----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 229 (428)
..+.++.+|+.+ +++ +++||+|++.. ++++ ..++..+++++.++|||||.+++.... . .
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~---~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~------~-~ 219 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAF---CLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL------E-E 219 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEES---CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE------S-C
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehh---hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec------C-c
Confidence 025778889887 443 25699999976 4444 567899999999999999999975210 0 0
Q ss_pred cchhhhhhhhhccCCCCcchhHHHHHhcCCCCceEEeec
Q 014247 230 DRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVETIT 268 (428)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 268 (428)
..+... ........++.+.+..+++++||+...+..+.
T Consensus 220 ~~~~~~-~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 220 SWYLAG-EARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp CEEEET-TEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ceEEcC-CeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 000000 00001345678899999999999987766554
No 77
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.58 E-value=2.6e-15 Score=140.43 Aligned_cols=106 Identities=23% Similarity=0.190 Sum_probs=86.5
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
..+.+.|.... ..+.+|||||||+|.++..+++.+. +|+|+|+| .|++.|++. .+++++++|+++++++
T Consensus 27 ~~l~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~ 96 (257)
T 4hg2_A 27 RALFRWLGEVA--PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLP 96 (257)
T ss_dssp HHHHHHHHHHS--SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCC
T ss_pred HHHHHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhccc
Confidence 34556666654 3457999999999999999999875 89999999 998776532 3699999999999886
Q ss_pred -CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 177 -EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 177 -~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
++||+|++.. .+++. +++.+++++.|+|||||+|++.
T Consensus 97 ~~sfD~v~~~~---~~h~~-~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 97 PASVDVAIAAQ---AMHWF-DLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp SSCEEEEEECS---CCTTC-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcccEEEEee---ehhHh-hHHHHHHHHHHHcCCCCEEEEE
Confidence 8999999965 45444 4888999999999999998753
No 78
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.57 E-value=1.4e-14 Score=137.18 Aligned_cols=137 Identities=17% Similarity=0.154 Sum_probs=105.7
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCce
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEV 179 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 179 (428)
+..+...+ .++.+|||+|||+|.++..+++.++.+|+|+|+| .+++.|+++++.+++.++++++++|+.++...++|
T Consensus 116 ~~~l~~~~--~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~f 193 (278)
T 2frn_A 116 RVRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIA 193 (278)
T ss_dssp HHHHHHHC--CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCE
T ss_pred HHHHHHhC--CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCc
Confidence 44444443 5689999999999999999999987689999999 99999999999999988899999999998777899
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCC
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAF 259 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 259 (428)
|+|+++... ....++..+.++|+|||.+++...... .. ...-....+...+.++||
T Consensus 194 D~Vi~~~p~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~-------~~----------~~~~~~~~i~~~~~~~G~ 249 (278)
T 2frn_A 194 DRILMGYVV-------RTHEFIPKALSIAKDGAIIHYHNTVPE-------KL----------MPREPFETFKRITKEYGY 249 (278)
T ss_dssp EEEEECCCS-------SGGGGHHHHHHHEEEEEEEEEEEEEEG-------GG----------TTTTTHHHHHHHHHHTTC
T ss_pred cEEEECCch-------hHHHHHHHHHHHCCCCeEEEEEEeecc-------cc----------ccccHHHHHHHHHHHcCC
Confidence 999986531 125677788899999999986543210 00 011124566777888898
Q ss_pred CCce
Q 014247 260 EEPS 263 (428)
Q Consensus 260 ~~~~ 263 (428)
....
T Consensus 250 ~~~~ 253 (278)
T 2frn_A 250 DVEK 253 (278)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 7544
No 79
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.57 E-value=5.9e-15 Score=137.74 Aligned_cols=153 Identities=12% Similarity=0.006 Sum_probs=105.9
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHH----------CC------CCCc
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKA----------NN------LTDK 162 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~----------~~------~~~~ 162 (428)
+.+.+.......++.+|||+|||+|..+..+|+.|+ +|+|||+| .+++.|+++... ++ ...+
T Consensus 56 l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 56 LKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp HHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred HHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 333443333335778999999999999999999988 89999999 999998765421 00 1246
Q ss_pred EEEEEcccccccCC--CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhh
Q 014247 163 VIVLHGRVEDVEID--EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWR 240 (428)
Q Consensus 163 v~~~~~d~~~l~~~--~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (428)
++++++|+.+++.. ++||+|++....+.+ ...+...+++++.++|||||++++.+... . .... -.
T Consensus 135 i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l-~~~~~~~~l~~~~~~LkpGG~l~l~~~~~-----~-~~~~------~g 201 (252)
T 2gb4_A 135 ISLYCCSIFDLPRANIGKFDRIWDRGALVAI-NPGDHDRYADIILSLLRKEFQYLVAVLSY-----D-PTKH------AG 201 (252)
T ss_dssp EEEEESCTTTGGGGCCCCEEEEEESSSTTTS-CGGGHHHHHHHHHHTEEEEEEEEEEEEEC-----C-TTSC------CC
T ss_pred eEEEECccccCCcccCCCEEEEEEhhhhhhC-CHHHHHHHHHHHHHHcCCCeEEEEEEEec-----C-CccC------CC
Confidence 99999999998764 799999986533333 34557889999999999999986432110 0 0000 01
Q ss_pred ccCCCCcchhHHHHHhcCCCCceEEee
Q 014247 241 NVYGIDMSAMMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 241 ~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 267 (428)
..+.++.+++..++.. +|+...++.+
T Consensus 202 ~~~~~~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 202 PPFYVPSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp SSCCCCHHHHHHHHTT-TEEEEEEEEE
T ss_pred CCCCCCHHHHHHHhhC-CeEEEEEecc
Confidence 1234567788888876 5876655543
No 80
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.57 E-value=2.7e-14 Score=138.62 Aligned_cols=160 Identities=14% Similarity=0.158 Sum_probs=116.0
Q ss_pred HHHhccCC--CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCce
Q 014247 103 AIMQNQSF--IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEV 179 (428)
Q Consensus 103 ~i~~~~~~--~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 179 (428)
.+.+.+.. .++.+|||||||+|.++..+++. +..+++++|++.+++.|++++...++.++++++.+|+.+.+.+..|
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 233 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDY 233 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCE
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCC
Confidence 34444444 67789999999999999999987 2349999999999999999998888888899999999887666679
Q ss_pred eEEEEecchhhhcch--hhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhh----h-ccCCCCcchhHH
Q 014247 180 DVIISEWMGYMLLYE--SMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFW----R-NVYGIDMSAMMP 252 (428)
Q Consensus 180 DlVvs~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~l~~ 252 (428)
|+|++.. .+++. .+...+++++.++|+|||++++......... ...........+ . ....++.+++..
T Consensus 234 D~v~~~~---~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 308 (335)
T 2r3s_A 234 DLVLLPN---FLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDR--ITPPDAAAFSLVMLATTPNGDAYTFAEYES 308 (335)
T ss_dssp EEEEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTS--SCSHHHHHHHHHHHHHSSSCCCCCHHHHHH
T ss_pred cEEEEcc---hhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCc--CCchHHHHHHHHHHeeCCCCCcCCHHHHHH
Confidence 9999866 44444 4467999999999999998887543221000 000111111111 1 234467889999
Q ss_pred HHHhcCCCCceEEee
Q 014247 253 LAKQCAFEEPSVETI 267 (428)
Q Consensus 253 ~l~~~Gf~~~~~~~~ 267 (428)
+++++||+...+...
T Consensus 309 ll~~aGf~~~~~~~~ 323 (335)
T 2r3s_A 309 MFSNAGFSHSQLHSL 323 (335)
T ss_dssp HHHHTTCSEEEEECC
T ss_pred HHHHCCCCeeeEEEC
Confidence 999999998776544
No 81
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.57 E-value=5.4e-15 Score=133.25 Aligned_cols=104 Identities=18% Similarity=0.217 Sum_probs=87.3
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCC-CcEEEEEcccccccC---CCc-eeEEEEe
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLT-DKVIVLHGRVEDVEI---DEE-VDVIISE 185 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~-~~v~~~~~d~~~l~~---~~~-~DlVvs~ 185 (428)
++.+|||+|||+|.++..++..++.+|+|+|+| .+++.|++++..+++. ++++++++|+.++.. .++ ||+|+++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 678999999999999999888877799999999 9999999999999884 569999999987633 367 9999997
Q ss_pred cchhhhcchhhHHHHHHHH--hcccccCeEEEccCC
Q 014247 186 WMGYMLLYESMLGSVITAR--DRWLKRGGLILPSYA 219 (428)
Q Consensus 186 ~~~~~l~~~~~~~~~l~~~--~~~LkpgG~lv~~~~ 219 (428)
.. + +......+++.+ .++|+|||.+++...
T Consensus 133 ~~---~-~~~~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 133 PP---F-HFNLAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp CC---S-SSCHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CC---C-CCccHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 63 2 245577888888 778999999987543
No 82
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.57 E-value=1.3e-14 Score=131.15 Aligned_cols=116 Identities=19% Similarity=0.212 Sum_probs=93.0
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
..+.+.+...+ .++.+|||+|||+|.++..+++.|..+|+|+|++ .+++.|+++... ..++.++++|+.+++++
T Consensus 30 ~~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~~~~ 104 (215)
T 2pxx_A 30 SSFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKLDFP 104 (215)
T ss_dssp HHHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSCCSC
T ss_pred HHHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcCCCC
Confidence 34566666554 6778999999999999999999877689999999 999999887653 24699999999988765
Q ss_pred -CceeEEEEecchhhhc------------chhhHHHHHHHHhcccccCeEEEccC
Q 014247 177 -EEVDVIISEWMGYMLL------------YESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 177 -~~~DlVvs~~~~~~l~------------~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++||+|++..+.+.+. +..+...+++++.++|+|||.+++..
T Consensus 105 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 105 SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 7899999976433332 24467899999999999999998643
No 83
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.56 E-value=3.2e-14 Score=134.30 Aligned_cols=103 Identities=23% Similarity=0.283 Sum_probs=87.1
Q ss_pred ccCCCCCCEEEEEcCCCcHHH-HHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEE
Q 014247 107 NQSFIEGKVVVDVGCGTGILS-IFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIIS 184 (428)
Q Consensus 107 ~~~~~~~~~VLDiGcGtG~ls-~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs 184 (428)
.+...++.+|||||||+|.++ ..+|+....+|+|+|++ ++++.|+++++..++ ++++++++|+.+++ +++||+|++
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~-d~~FDvV~~ 194 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID-GLEFDVLMV 194 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG-GCCCSEEEE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC-CCCcCEEEE
Confidence 456788999999999998765 55666433499999999 999999999998888 78999999999886 589999997
Q ss_pred ecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 185 EWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 185 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.. . ..+...+++++.++|||||++++.
T Consensus 195 ~a---~---~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 195 AA---L---AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp CT---T---CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CC---C---ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 54 2 356889999999999999999964
No 84
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.56 E-value=1.4e-14 Score=127.33 Aligned_cols=105 Identities=14% Similarity=0.202 Sum_probs=86.7
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-c-CCCceeEEEEec
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-E-IDEEVDVIISEW 186 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~-~~~~~DlVvs~~ 186 (428)
..++.+|||+|||+|.++..+++.+..+|+|+|++ .+++.|++++..+++.++++++++|+.+. + .+++||+|+++.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 46788999999999999999999877799999999 99999999999988877899999999873 2 246799999975
Q ss_pred chhhhcchhhHHHHHHHHh--cccccCeEEEccC
Q 014247 187 MGYMLLYESMLGSVITARD--RWLKRGGLILPSY 218 (428)
Q Consensus 187 ~~~~l~~~~~~~~~l~~~~--~~LkpgG~lv~~~ 218 (428)
.. +......+++.+. ++|+|||.+++..
T Consensus 109 ~~----~~~~~~~~~~~l~~~~~L~~gG~l~~~~ 138 (177)
T 2esr_A 109 PY----AKETIVATIEALAAKNLLSEQVMVVCET 138 (177)
T ss_dssp SS----HHHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CC----CcchHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 31 1233566666666 9999999998753
No 85
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.56 E-value=2.2e-14 Score=136.16 Aligned_cols=102 Identities=25% Similarity=0.322 Sum_probs=89.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.++.+|||+|||+|.++..+++.|. +|+|+|+| .+++.|++++..+++ +++++++|+.+++.+++||+|++..+.+
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQENYDFIVSTVVFM 195 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSCEEEEEECSSGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCCccEEEEccchh
Confidence 4788999999999999999999977 99999999 999999999998887 6999999999987788999999976333
Q ss_pred hhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 190 MLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 190 ~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
.+ .......+++++.++|+|||.+++
T Consensus 196 ~~-~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 196 FL-NRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp GS-CGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred hC-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 22 335578999999999999999775
No 86
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.56 E-value=2.9e-14 Score=136.30 Aligned_cols=114 Identities=19% Similarity=0.234 Sum_probs=94.1
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHH--cCCCeEEEEeCh-HHHHHHHHHHHHC-CCCCcEEEEEccccccc
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQ--AGAKRVYAVDAS-DIAVQANEVVKAN-NLTDKVIVLHGRVEDVE 174 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~--~g~~~V~giD~s-~~~~~a~~~~~~~-~~~~~v~~~~~d~~~l~ 174 (428)
.+.+.+..... .++.+|||||||+|.++..+++ .+..+|+|+|+| .+++.|++++... +...+++++++|+.+++
T Consensus 24 ~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 102 (299)
T 3g5t_A 24 DFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK 102 (299)
T ss_dssp HHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG
T ss_pred HHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC
Confidence 44555555543 5789999999999999999996 346699999999 9999999998886 45567999999999876
Q ss_pred CC-------CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 ID-------EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 ~~-------~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.+ ++||+|++.. .+++. ++..+++++.++|+|||.+++.
T Consensus 103 ~~~~~~~~~~~fD~V~~~~---~l~~~-~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 103 FLGADSVDKQKIDMITAVE---CAHWF-DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp GGCTTTTTSSCEEEEEEES---CGGGS-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccccCCCeeEEeHhh---HHHHh-CHHHHHHHHHHhcCCCcEEEEE
Confidence 53 5899999976 55555 7999999999999999999873
No 87
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.56 E-value=1.4e-14 Score=134.15 Aligned_cols=99 Identities=20% Similarity=0.233 Sum_probs=85.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC----CCceeEEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----DEEVDVIIS 184 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----~~~~DlVvs 184 (428)
.++.+|||||||+|.++..++.. ...+|+|+|++ .+++.|++++..+++.+ ++++++|+.+++. .++||+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLEN-TTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEeccHHHhcccccccCCccEEEE
Confidence 46789999999999999999864 34589999999 99999999999988865 9999999988764 378999998
Q ss_pred ecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 185 EWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 185 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
..+ .++..+++.+.++|+|||.+++.
T Consensus 148 ~~~-------~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 148 RAV-------ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp ECC-------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred ecc-------CCHHHHHHHHHHhcCCCCEEEEE
Confidence 541 35789999999999999999863
No 88
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.56 E-value=3.8e-15 Score=130.02 Aligned_cols=133 Identities=22% Similarity=0.188 Sum_probs=100.1
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-CceeEEEEecc
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEVDVIISEWM 187 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~~ 187 (428)
..++.+|||+|||+|.++..+++.+. +|+|+|++ .+++.++++ ..+++++.+| ++.+ ++||+|++..
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~~~~~~D~v~~~~- 83 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK------FDSVITLSDP---KEIPDNSVDFILFAN- 83 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH------CTTSEEESSG---GGSCTTCEEEEEEES-
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCCCCCceEEEEEcc-
Confidence 46788999999999999999999876 99999999 899888877 2368999999 3433 7899999876
Q ss_pred hhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCCCCceEEee
Q 014247 188 GYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 188 ~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 267 (428)
.+.+..++..+++++.++|+|||.+++....... ..... .....++...+..+++ ||+.......
T Consensus 84 --~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~------~~~~~-----~~~~~~~~~~~~~~l~--Gf~~~~~~~~ 148 (170)
T 3i9f_A 84 --SFHDMDDKQHVISEVKRILKDDGRVIIIDWRKEN------TGIGP-----PLSIRMDEKDYMGWFS--NFVVEKRFNP 148 (170)
T ss_dssp --CSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSC------CSSSS-----CGGGCCCHHHHHHHTT--TEEEEEEECS
T ss_pred --chhcccCHHHHHHHHHHhcCCCCEEEEEEcCccc------cccCc-----hHhhhcCHHHHHHHHh--CcEEEEccCC
Confidence 5666677899999999999999999875322110 00000 0123467788888887 9987665544
Q ss_pred c
Q 014247 268 T 268 (428)
Q Consensus 268 ~ 268 (428)
.
T Consensus 149 ~ 149 (170)
T 3i9f_A 149 T 149 (170)
T ss_dssp S
T ss_pred C
Confidence 3
No 89
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.55 E-value=8.8e-15 Score=133.40 Aligned_cols=135 Identities=21% Similarity=0.280 Sum_probs=101.7
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-CceeEEEEecchh
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEVDVIISEWMGY 189 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~~~~ 189 (428)
++.+|||||||+|.++..+++. +|+|++ .+++.++++ +++++.+|+.+++.+ ++||+|++..
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~--- 110 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVT--- 110 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEES---
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcc---
Confidence 3789999999999999888664 999999 898888765 488999999988765 6899999865
Q ss_pred hhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhh-------hhhhhccCCCCcchhHHHHHhcCCCCc
Q 014247 190 MLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSES-------IDFWRNVYGIDMSAMMPLAKQCAFEEP 262 (428)
Q Consensus 190 ~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 262 (428)
.+.+..++..+++++.++|+|||.+++..... ...+... ..++.....++...+..+++++||+..
T Consensus 111 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 111 TICFVDDPERALKEAYRILKKGGYLIVGIVDR-------ESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp CGGGSSCHHHHHHHHHHHEEEEEEEEEEEECS-------SSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred hHhhccCHHHHHHHHHHHcCCCcEEEEEEeCC-------ccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEE
Confidence 56666778999999999999999998754321 1111100 011122344678899999999999987
Q ss_pred eEEeecC
Q 014247 263 SVETITG 269 (428)
Q Consensus 263 ~~~~~~~ 269 (428)
.+.....
T Consensus 184 ~~~~~~~ 190 (219)
T 1vlm_A 184 KVVQTLF 190 (219)
T ss_dssp EEEEECC
T ss_pred EEecccC
Confidence 7665543
No 90
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.55 E-value=4.9e-14 Score=128.62 Aligned_cols=130 Identities=18% Similarity=0.148 Sum_probs=104.6
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC-ce
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE-EV 179 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~-~~ 179 (428)
++...+ .++.+|||||||+|.++..+++.+ +.+|+|+|++ .+++.|+++++.+++.++|+++.+|..+...++ +|
T Consensus 14 ~i~~~v--~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~ 91 (230)
T 3lec_A 14 KVANYV--PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNI 91 (230)
T ss_dssp HHHTTS--CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCC
T ss_pred HHHHhC--CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccccccc
Confidence 344444 577899999999999999999986 5589999999 999999999999999999999999988865553 79
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCC
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAF 259 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 259 (428)
|+|+...|+. ..+..++......|+++|.++++ |. .....++.++.+.||
T Consensus 92 D~IviaGmGg-----~lI~~IL~~~~~~l~~~~~lIlq-------p~------------------~~~~~lr~~L~~~Gf 141 (230)
T 3lec_A 92 DTITICGMGG-----RLIADILNNDIDKLQHVKTLVLQ-------PN------------------NREDDLRKWLAANDF 141 (230)
T ss_dssp CEEEEEEECH-----HHHHHHHHHTGGGGTTCCEEEEE-------ES------------------SCHHHHHHHHHHTTE
T ss_pred CEEEEeCCch-----HHHHHHHHHHHHHhCcCCEEEEE-------CC------------------CChHHHHHHHHHCCC
Confidence 9988755443 23677888889999999999854 22 124567888899999
Q ss_pred CCceE
Q 014247 260 EEPSV 264 (428)
Q Consensus 260 ~~~~~ 264 (428)
....-
T Consensus 142 ~i~~E 146 (230)
T 3lec_A 142 EIVAE 146 (230)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76543
No 91
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.55 E-value=2.6e-14 Score=131.55 Aligned_cols=111 Identities=17% Similarity=0.282 Sum_probs=88.5
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE 177 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~ 177 (428)
.+.+.+.... .++.+|||||||+|.++..+++.+. +|+|+|+| .+++.|+++. .++.++++|+.+++.++
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~ 99 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRLGR 99 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCCSS
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcccCC
Confidence 4445555544 5778999999999999999999866 99999999 9999888763 24899999999887778
Q ss_pred ceeEEEEec-chhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 178 EVDVIISEW-MGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 178 ~~DlVvs~~-~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+||+|+|.. ..+.+....++..+++++.++|+|||.+++..
T Consensus 100 ~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 100 KFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 999999632 22222233668899999999999999999874
No 92
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.55 E-value=1.7e-14 Score=127.67 Aligned_cols=115 Identities=13% Similarity=0.176 Sum_probs=90.5
Q ss_pred HHHHHHhcc-CCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC--
Q 014247 100 YRAAIMQNQ-SFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-- 175 (428)
Q Consensus 100 ~~~~i~~~~-~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-- 175 (428)
+.+.+...+ ...++.+|||+|||+|.++..+++.+..+|+|+|++ .+++.|++++..+++.++++++++|+.+...
T Consensus 31 ~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 110 (187)
T 2fhp_A 31 VKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQF 110 (187)
T ss_dssp HHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHH
Confidence 344444443 235788999999999999999988877799999999 9999999999998887789999999987432
Q ss_pred ---CCceeEEEEecchhhhcchhhHHHHHHHH--hcccccCeEEEccC
Q 014247 176 ---DEEVDVIISEWMGYMLLYESMLGSVITAR--DRWLKRGGLILPSY 218 (428)
Q Consensus 176 ---~~~~DlVvs~~~~~~l~~~~~~~~~l~~~--~~~LkpgG~lv~~~ 218 (428)
.++||+|+++.. +. ......++..+ .++|+|||.+++..
T Consensus 111 ~~~~~~fD~i~~~~~---~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 111 YEEKLQFDLVLLDPP---YA-KQEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp HHTTCCEEEEEECCC---GG-GCCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred HhcCCCCCEEEECCC---CC-chhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 478999999763 11 23355666666 89999999998753
No 93
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.55 E-value=4.2e-14 Score=125.43 Aligned_cols=114 Identities=24% Similarity=0.323 Sum_probs=94.9
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCC-cEEEEEcccccccCCC
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTD-KVIVLHGRVEDVEIDE 177 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~-~v~~~~~d~~~l~~~~ 177 (428)
..+.+.+.+...++.+|||+|||+|.++..+++. ..+|+|+|++ .+++.|++++..+++.+ +++++++|+.+...++
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 3445556666668899999999999999999998 4599999999 99999999999888765 5999999998755457
Q ss_pred ceeEEEEecchhhhcc-hhhHHHHHHHHhcccccCeEEEcc
Q 014247 178 EVDVIISEWMGYMLLY-ESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~-~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+||+|+++. .+++ ......+++.+.++|+|||.+++.
T Consensus 119 ~~D~v~~~~---~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 119 KYNKIITNP---PIRAGKEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp CEEEEEECC---CSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECC---CcccchhHHHHHHHHHHHHcCCCCEEEEE
Confidence 899999976 3333 456889999999999999999865
No 94
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.55 E-value=1e-13 Score=125.28 Aligned_cols=134 Identities=16% Similarity=0.169 Sum_probs=100.3
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-Cc
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EE 178 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~ 178 (428)
.+.+.... .++.+|||||||+|.++..+ +..+|+|+|++ .+++.|+++. .++.++++|+.+++.+ ++
T Consensus 27 ~~~l~~~~--~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~ 95 (211)
T 2gs9_A 27 ERALKGLL--PPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGES 95 (211)
T ss_dssp HHHHHTTC--CCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSC
T ss_pred HHHHHHhc--CCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCc
Confidence 34444444 27889999999999998877 55589999999 9999888765 3589999999988765 78
Q ss_pred eeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhh--------hhhhhccCCCCcchh
Q 014247 179 VDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSES--------IDFWRNVYGIDMSAM 250 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l 250 (428)
||+|++.. .+++..++..+++++.++|||||.+++..... ...+... ...+.....++..++
T Consensus 96 fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 165 (211)
T 2gs9_A 96 FDVVLLFT---TLEFVEDVERVLLEARRVLRPGGALVVGVLEA-------LSPWAALYRRLGEKGVLPWAQARFLAREDL 165 (211)
T ss_dssp EEEEEEES---CTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT-------TSHHHHHHHHHHHTTCTTGGGCCCCCHHHH
T ss_pred EEEEEEcC---hhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC-------cCcHHHHHHHHhhccCccccccccCCHHHH
Confidence 99999865 66666789999999999999999998754321 1111110 112334455788889
Q ss_pred HHHHH
Q 014247 251 MPLAK 255 (428)
Q Consensus 251 ~~~l~ 255 (428)
..+++
T Consensus 166 ~~~l~ 170 (211)
T 2gs9_A 166 KALLG 170 (211)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99887
No 95
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.55 E-value=5.1e-14 Score=136.76 Aligned_cols=153 Identities=16% Similarity=0.070 Sum_probs=111.6
Q ss_pred CCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecc
Q 014247 109 SFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWM 187 (428)
Q Consensus 109 ~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~ 187 (428)
...+..+|||||||+|.++..+++. +..+++++|+..+++.|++++...++.++++++.+|+. .+.+.+||+|++..
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~~~D~v~~~~- 243 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPAGAGGYVLSA- 243 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCCSCSEEEEES-
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCCCCcEEEEeh-
Confidence 3345689999999999999999886 33489999998899999999999888889999999997 34445899999876
Q ss_pred hhhhcchhh--HHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhh-hhccCCCCcchhHHHHHhcCCCCceE
Q 014247 188 GYMLLYESM--LGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDF-WRNVYGIDMSAMMPLAKQCAFEEPSV 264 (428)
Q Consensus 188 ~~~l~~~~~--~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~Gf~~~~~ 264 (428)
++++..+ ...+++++++.|+|||++++........ .+..+.+.... .......+..++..+++++||+...+
T Consensus 244 --vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~---~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 318 (332)
T 3i53_A 244 --VLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE---HAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAA 318 (332)
T ss_dssp --CGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC------CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred --hhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC---CccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 5554444 5889999999999999998765432211 11111111100 11223356788999999999998776
Q ss_pred Eeec
Q 014247 265 ETIT 268 (428)
Q Consensus 265 ~~~~ 268 (428)
....
T Consensus 319 ~~~~ 322 (332)
T 3i53_A 319 HPIS 322 (332)
T ss_dssp EECS
T ss_pred EECC
Confidence 6543
No 96
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.55 E-value=5.8e-14 Score=127.86 Aligned_cols=129 Identities=19% Similarity=0.178 Sum_probs=102.2
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-ccCCCce
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-VEIDEEV 179 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-l~~~~~~ 179 (428)
++...+ .++.+|||||||+|.++..+++.+ ..+|+|+|++ .+++.|+++++.+++.++|+++.+|..+ ++...+|
T Consensus 8 ~l~~~v--~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~ 85 (225)
T 3kr9_A 8 LVASFV--SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQV 85 (225)
T ss_dssp HHHTTS--CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCC
T ss_pred HHHHhC--CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCC
Confidence 344444 577899999999999999999986 5589999999 9999999999999999899999999854 4332379
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCC
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAF 259 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 259 (428)
|+|+...++. ..+..++......|+++|.++++ +. .....+..++.+.||
T Consensus 86 D~IviaG~Gg-----~~i~~Il~~~~~~L~~~~~lVlq-------~~------------------~~~~~vr~~L~~~Gf 135 (225)
T 3kr9_A 86 SVITIAGMGG-----RLIARILEEGLGKLANVERLILQ-------PN------------------NREDDLRIWLQDHGF 135 (225)
T ss_dssp CEEEEEEECH-----HHHHHHHHHTGGGCTTCCEEEEE-------ES------------------SCHHHHHHHHHHTTE
T ss_pred CEEEEcCCCh-----HHHHHHHHHHHHHhCCCCEEEEE-------CC------------------CCHHHHHHHHHHCCC
Confidence 9998755432 23678899999999999999863 22 123467778888998
Q ss_pred CCce
Q 014247 260 EEPS 263 (428)
Q Consensus 260 ~~~~ 263 (428)
....
T Consensus 136 ~i~~ 139 (225)
T 3kr9_A 136 QIVA 139 (225)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 97
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.53 E-value=7.7e-14 Score=128.31 Aligned_cols=129 Identities=16% Similarity=0.186 Sum_probs=103.8
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC-ce
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE-EV 179 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~-~~ 179 (428)
++...+ .++.+|||||||+|.++..+++.+ +.+|+|+|++ .+++.|+++++.+++.++|+++.+|..+...++ +|
T Consensus 14 ~i~~~v--~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~ 91 (244)
T 3gnl_A 14 KVASYI--TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAI 91 (244)
T ss_dssp HHHTTC--CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCC
T ss_pred HHHHhC--CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccc
Confidence 444554 577899999999999999999986 4589999999 999999999999999999999999988765544 59
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCC
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAF 259 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 259 (428)
|+|++..++. ..+..++......|+++|.+|++ |.. ....++.++.+.||
T Consensus 92 D~IviagmGg-----~lI~~IL~~~~~~L~~~~~lIlq-------~~~------------------~~~~lr~~L~~~Gf 141 (244)
T 3gnl_A 92 DTIVIAGMGG-----TLIRTILEEGAAKLAGVTKLILQ-------PNI------------------AAWQLREWSEQNNW 141 (244)
T ss_dssp CEEEEEEECH-----HHHHHHHHHTGGGGTTCCEEEEE-------ESS------------------CHHHHHHHHHHHTE
T ss_pred cEEEEeCCch-----HHHHHHHHHHHHHhCCCCEEEEE-------cCC------------------ChHHHHHHHHHCCC
Confidence 9998755443 23677888899999999999864 221 23567788889999
Q ss_pred CCce
Q 014247 260 EEPS 263 (428)
Q Consensus 260 ~~~~ 263 (428)
....
T Consensus 142 ~i~~ 145 (244)
T 3gnl_A 142 LITS 145 (244)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7644
No 98
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.53 E-value=1.1e-13 Score=136.31 Aligned_cols=158 Identities=15% Similarity=0.121 Sum_probs=114.5
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCcee
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVD 180 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~D 180 (428)
..+.+.....++.+|||||||+|.++..+++.. ..+++++|+..+++.|++++...++.++|+++.+|+. .+.+..||
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~~~D 270 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFF-ETIPDGAD 270 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCSSCS
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCCCce
Confidence 345555555678899999999999999999873 3489999998889999999999888889999999998 34455899
Q ss_pred EEEEecchhhhcchhhH--HHHHHHHhcccccCeEEEccCCeeeEeecCCccc--hhhhh-hhhhccCCCCcchhHHHHH
Q 014247 181 VIISEWMGYMLLYESML--GSVITARDRWLKRGGLILPSYATLYMAPVTHPDR--YSESI-DFWRNVYGIDMSAMMPLAK 255 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~~~l~ 255 (428)
+|++.. ++++..+. ..+++++.+.|+|||++++...... -..... +.+.. -........+.+++..+++
T Consensus 271 ~v~~~~---vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~---~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~ 344 (369)
T 3gwz_A 271 VYLIKH---VLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLID---ERPAASTLFVDLLLLVLVGGAERSESEFAALLE 344 (369)
T ss_dssp EEEEES---CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCC---SSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHH
T ss_pred EEEhhh---hhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC---CCCCCchhHhhHHHHhhcCCccCCHHHHHHHHH
Confidence 999876 45554444 4799999999999999987543221 000000 11100 0011223356788999999
Q ss_pred hcCCCCceEEe
Q 014247 256 QCAFEEPSVET 266 (428)
Q Consensus 256 ~~Gf~~~~~~~ 266 (428)
++||+...+..
T Consensus 345 ~aGf~~~~~~~ 355 (369)
T 3gwz_A 345 KSGLRVERSLP 355 (369)
T ss_dssp TTTEEEEEEEE
T ss_pred HCCCeEEEEEE
Confidence 99999877654
No 99
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.53 E-value=1.8e-13 Score=134.35 Aligned_cols=160 Identities=10% Similarity=0.065 Sum_probs=115.9
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCcee
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVD 180 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~D 180 (428)
+.+.+.+...++.+|||||||+|.++..+++.. ..+++++|+..+++.|++++...++.++++++.+|+.+.+.+. +|
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~D 258 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE-AD 258 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC-CS
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC-CC
Confidence 344555556778899999999999999999873 3489999998889999999999888888999999998876554 49
Q ss_pred EEEEecchhhhcchhh--HHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhh-ccCC------CCcchhH
Q 014247 181 VIISEWMGYMLLYESM--LGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWR-NVYG------IDMSAMM 251 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~--~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~l~ 251 (428)
+|++.. .+++..+ ...+++++.++|+|||++++...... -.....+......+. ...+ ++..++.
T Consensus 259 ~v~~~~---vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~ 332 (359)
T 1x19_A 259 AVLFCR---ILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID---DPENPNFDYLSHYILGAGMPFSVLGFKEQARYK 332 (359)
T ss_dssp EEEEES---CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC---CTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHH
T ss_pred EEEEec---hhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC---CCCCchHHHHHHHHHhcCCCCcccCCCCHHHHH
Confidence 999866 4544444 78999999999999999976542211 000111111101111 1112 6788999
Q ss_pred HHHHhcCCCCceEEeec
Q 014247 252 PLAKQCAFEEPSVETIT 268 (428)
Q Consensus 252 ~~l~~~Gf~~~~~~~~~ 268 (428)
++++++||+...+....
T Consensus 333 ~ll~~aGf~~v~~~~~~ 349 (359)
T 1x19_A 333 EILESLGYKDVTMVRKY 349 (359)
T ss_dssp HHHHHHTCEEEEEEEET
T ss_pred HHHHHCCCceEEEEecC
Confidence 99999999987766543
No 100
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.52 E-value=4.3e-14 Score=123.97 Aligned_cols=110 Identities=16% Similarity=0.165 Sum_probs=88.9
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-ccCC
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-VEID 176 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-l~~~ 176 (428)
+...+...+...++.+|||+|||+|.++..+++. +..+|+|+|++ .+++.|++++..+++.+++ ++++|..+ ++..
T Consensus 13 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~ 91 (178)
T 3hm2_A 13 VRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV 91 (178)
T ss_dssp HHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC
T ss_pred HHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc
Confidence 4455555556678899999999999999999987 34599999999 9999999999998887678 88888754 3333
Q ss_pred -CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 177 -EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 177 -~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
++||+|++.. .+.+ ..+++.+.++|+|||++++.
T Consensus 92 ~~~~D~i~~~~---~~~~----~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 92 PDNPDVIFIGG---GLTA----PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp CSCCSEEEECC----TTC----TTHHHHHHHTCCTTCEEEEE
T ss_pred CCCCCEEEECC---cccH----HHHHHHHHHhcCCCCEEEEE
Confidence 7899999865 3433 67888999999999999864
No 101
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.52 E-value=7.7e-14 Score=130.37 Aligned_cols=135 Identities=19% Similarity=0.218 Sum_probs=105.4
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
..+.+++...+ .++.+|||+|||+|.++..+++.|+ +|+|+|++ .+++.|++++..+++. ++++++|+.+....
T Consensus 108 ~~~~~~l~~~~--~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~~ 182 (254)
T 2nxc_A 108 RLALKALARHL--RPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALPF 182 (254)
T ss_dssp HHHHHHHHHHC--CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGGG
T ss_pred HHHHHHHHHhc--CCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCcC
Confidence 34455555553 6789999999999999999999988 99999999 9999999999998875 89999998774224
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHh
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQ 256 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 256 (428)
++||+|+++.+. ..+..++..+.++|+|||+++++.... -....+...+++
T Consensus 183 ~~fD~Vv~n~~~------~~~~~~l~~~~~~LkpgG~lils~~~~-----------------------~~~~~v~~~l~~ 233 (254)
T 2nxc_A 183 GPFDLLVANLYA------ELHAALAPRYREALVPGGRALLTGILK-----------------------DRAPLVREAMAG 233 (254)
T ss_dssp CCEEEEEEECCH------HHHHHHHHHHHHHEEEEEEEEEEEEEG-----------------------GGHHHHHHHHHH
T ss_pred CCCCEEEECCcH------HHHHHHHHHHHHHcCCCCEEEEEeecc-----------------------CCHHHHHHHHHH
Confidence 789999997522 236788999999999999998742110 124567778889
Q ss_pred cCCCCceEEe
Q 014247 257 CAFEEPSVET 266 (428)
Q Consensus 257 ~Gf~~~~~~~ 266 (428)
+||+...+..
T Consensus 234 ~Gf~~~~~~~ 243 (254)
T 2nxc_A 234 AGFRPLEEAA 243 (254)
T ss_dssp TTCEEEEEEE
T ss_pred CCCEEEEEec
Confidence 9998766544
No 102
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.52 E-value=6.9e-14 Score=125.11 Aligned_cols=108 Identities=22% Similarity=0.308 Sum_probs=89.0
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--CCCceeEEEE
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--IDEEVDVIIS 184 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~~~~~DlVvs 184 (428)
..++.+|||+|||+|.++..+++. +..+|+|+|++ .+++.|++++..+++.++++++++|+.++. .+++||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 367889999999999999999987 34599999999 999999999999988778999999998874 3489999998
Q ss_pred ecch------hhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 185 EWMG------YMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 185 ~~~~------~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+... .......+...+++++.++|+|||++++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 7521 01122335677999999999999999864
No 103
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.52 E-value=5.5e-14 Score=137.57 Aligned_cols=115 Identities=21% Similarity=0.248 Sum_probs=92.2
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHH-------HHCCC-CCcEEEEEccc
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVV-------KANNL-TDKVIVLHGRV 170 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~-------~~~~~-~~~v~~~~~d~ 170 (428)
...+.+.+...++.+|||||||+|.+++.+|.. ++.+|+|||++ .+++.|++++ +.+++ ..+|+|+++|+
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~ 241 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF 241 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc
Confidence 344555566789999999999999999998865 77679999999 8999988754 34565 36799999999
Q ss_pred ccccCC---CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 171 EDVEID---EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 171 ~~l~~~---~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
.++++. ..||+|+++. .++ ..++...|.++.+.|||||+|+....
T Consensus 242 ~~lp~~d~~~~aDVVf~Nn---~~F-~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 242 LSEEWRERIANTSVIFVNN---FAF-GPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp TSHHHHHHHHTCSEEEECC---TTC-CHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred cCCccccccCCccEEEEcc---ccc-CchHHHHHHHHHHcCCCCcEEEEeec
Confidence 988764 4799999976 333 45688888999999999999997654
No 104
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.52 E-value=1.7e-13 Score=121.28 Aligned_cols=112 Identities=26% Similarity=0.355 Sum_probs=92.8
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-ccCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-VEID 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-l~~~ 176 (428)
.....+...+...++.+|||+|||+|.++..+++.+ .+|+++|++ .+++.|++++..+++..++.++++|+.+ ++..
T Consensus 20 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (192)
T 1l3i_A 20 EVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI 98 (192)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC
Confidence 344555565666788999999999999999999987 699999999 9999999999998886679999999887 3322
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
++||+|++.. .+ ..+..+++.+.++|+|||.+++.
T Consensus 99 ~~~D~v~~~~---~~---~~~~~~l~~~~~~l~~gG~l~~~ 133 (192)
T 1l3i_A 99 PDIDIAVVGG---SG---GELQEILRIIKDKLKPGGRIIVT 133 (192)
T ss_dssp CCEEEEEESC---CT---TCHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCEEEECC---ch---HHHHHHHHHHHHhcCCCcEEEEE
Confidence 6899999864 22 24688999999999999999864
No 105
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.52 E-value=3.7e-14 Score=124.39 Aligned_cols=111 Identities=14% Similarity=0.065 Sum_probs=89.1
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc
Q 014247 97 TETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV 173 (428)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l 173 (428)
.+.+...+...+ .+..+|||+|||+|.+++.++.. ++ +|+|+|+| .|++.+++++..+|...++++ .|....
T Consensus 36 ld~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~ 110 (200)
T 3fzg_A 36 LNDFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD 110 (200)
T ss_dssp HHHHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH
T ss_pred HHHHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc
Confidence 345555666665 55789999999999999999886 45 99999999 999999999999999877777 565555
Q ss_pred cCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEE
Q 014247 174 EIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 174 ~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
..+++||+|++..+.++ ..+.+..+.++.+.|+|||++|
T Consensus 111 ~~~~~~DvVLa~k~LHl---L~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 111 VYKGTYDVVFLLKMLPV---LKQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp HTTSEEEEEEEETCHHH---HHHTTCCHHHHHHTCEEEEEEE
T ss_pred CCCCCcChhhHhhHHHh---hhhhHHHHHHHHHHhCCCCEEE
Confidence 56689999998764333 3556666778999999999988
No 106
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.52 E-value=2.7e-13 Score=128.19 Aligned_cols=144 Identities=16% Similarity=0.155 Sum_probs=109.3
Q ss_pred hhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc
Q 014247 95 VRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED 172 (428)
Q Consensus 95 ~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 172 (428)
...+.+.+.+...+. .++.+|||+|||+|.++..+++. +..+|+|+|+| .+++.|++++..+++. +++++++|+.+
T Consensus 93 ~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~ 170 (276)
T 2b3t_A 93 PDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFS 170 (276)
T ss_dssp TTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTG
T ss_pred chHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhh
Confidence 345666666766654 56789999999999999999975 44599999999 9999999999988876 59999999987
Q ss_pred ccCCCceeEEEEecchh----------hhcch------------hhHHHHHHHHhcccccCeEEEccCCeeeEeecCCcc
Q 014247 173 VEIDEEVDVIISEWMGY----------MLLYE------------SMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPD 230 (428)
Q Consensus 173 l~~~~~~DlVvs~~~~~----------~l~~~------------~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 230 (428)
...+++||+|+++.... .+.++ .....++..+.++|+|||.+++...
T Consensus 171 ~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~----------- 239 (276)
T 2b3t_A 171 ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG----------- 239 (276)
T ss_dssp GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC-----------
T ss_pred hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC-----------
Confidence 54357899999974211 11111 3468889999999999999986421
Q ss_pred chhhhhhhhhccCCCCcchhHHHHHhcCCCCceE
Q 014247 231 RYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSV 264 (428)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 264 (428)
......+..+++++||....+
T Consensus 240 -------------~~~~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 240 -------------WQQGEAVRQAFILAGYHDVET 260 (276)
T ss_dssp -------------SSCHHHHHHHHHHTTCTTCCE
T ss_pred -------------chHHHHHHHHHHHCCCcEEEE
Confidence 012456777888899986554
No 107
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.51 E-value=4.8e-14 Score=135.06 Aligned_cols=108 Identities=15% Similarity=0.100 Sum_probs=81.3
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCC-----cEEEEEccc------cccc---CC
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTD-----KVIVLHGRV------EDVE---ID 176 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~-----~v~~~~~d~------~~l~---~~ 176 (428)
++.+|||||||+|..+..+++.+..+|+|+|+| .|++.|+++....+... ++++.+.|+ .+++ ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 578999999999986666666665699999999 99999999887655421 267888887 3332 23
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
++||+|+|....+.+....+...+++++.++|||||.++++.+
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 7999999966333222223468999999999999999997754
No 108
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.51 E-value=3.8e-14 Score=127.72 Aligned_cols=102 Identities=13% Similarity=0.161 Sum_probs=84.4
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-cC-CCceeEEEEecch
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-EI-DEEVDVIISEWMG 188 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~~-~~~~DlVvs~~~~ 188 (428)
++.+|||+|||+|.++..+++.++.+|+|+|++ .+++.|++++..+++ ++++++++|+.+. +. .++||+|+++..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p- 131 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPP- 131 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCS-
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCC-
Confidence 678999999999999999888887799999999 999999999999888 5699999998873 33 368999999763
Q ss_pred hhhcchhhHHHHHHHHhc--ccccCeEEEccC
Q 014247 189 YMLLYESMLGSVITARDR--WLKRGGLILPSY 218 (428)
Q Consensus 189 ~~l~~~~~~~~~l~~~~~--~LkpgG~lv~~~ 218 (428)
+ +......+++.+.+ +|+|||++++..
T Consensus 132 --~-~~~~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 132 --F-RRGLLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp --S-STTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred --C-CCCcHHHHHHHHHhcCccCCCcEEEEEE
Confidence 1 23446677777754 699999998653
No 109
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.51 E-value=1.2e-13 Score=136.20 Aligned_cols=159 Identities=21% Similarity=0.152 Sum_probs=113.7
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeE
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDV 181 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~Dl 181 (428)
.+.+.+...++.+|||||||+|.++..+++.. ..+++++|+..+++.|++++..+++.++++++.+|+.+ +.+..||+
T Consensus 173 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~D~ 251 (374)
T 1qzz_A 173 APADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFK-PLPVTADV 251 (374)
T ss_dssp HHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCCEEE
T ss_pred HHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCCCCE
Confidence 44455555678899999999999999999874 34899999988899999999998888789999999876 34456999
Q ss_pred EEEecchhhhcchhhH--HHHHHHHhcccccCeEEEccCC--eeeEeecCCccchhhhhhh----hhccCCCCcchhHHH
Q 014247 182 IISEWMGYMLLYESML--GSVITARDRWLKRGGLILPSYA--TLYMAPVTHPDRYSESIDF----WRNVYGIDMSAMMPL 253 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lv~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~ 253 (428)
|++.. ++++..+. ..+++++.++|+|||++++... ... -.....+...... +.....++..++..+
T Consensus 252 v~~~~---vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (374)
T 1qzz_A 252 VLLSF---VLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEG---DGADRFFSTLLDLRMLTFMGGRVRTRDEVVDL 325 (374)
T ss_dssp EEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH----------HHHHHHHHHHHHHHHSCCCCCHHHHHHH
T ss_pred EEEec---cccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcC---CCCCcchhhhcchHHHHhCCCcCCCHHHHHHH
Confidence 99876 44444433 5899999999999999887544 211 0001111111111 111233578899999
Q ss_pred HHhcCCCCceEEeec
Q 014247 254 AKQCAFEEPSVETIT 268 (428)
Q Consensus 254 l~~~Gf~~~~~~~~~ 268 (428)
++++||+...+....
T Consensus 326 l~~aGf~~~~~~~~~ 340 (374)
T 1qzz_A 326 AGSAGLALASERTSG 340 (374)
T ss_dssp HHTTTEEEEEEEEEC
T ss_pred HHHCCCceEEEEECC
Confidence 999999987766553
No 110
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.51 E-value=5.1e-14 Score=126.92 Aligned_cols=103 Identities=21% Similarity=0.315 Sum_probs=84.7
Q ss_pred CCCCEEEEEcCCCcHH-HHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-CceeEEEEecc
Q 014247 111 IEGKVVVDVGCGTGIL-SIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEVDVIISEWM 187 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~l-s~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~~ 187 (428)
.++.+|||+|||+|.+ ...+++.+. +|+|+|+| .+++.|++++..++. ++.++++|+.+++.+ ++||+|++..
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~- 97 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLPFKDESMSFVYSYG- 97 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCCSCTTCEEEEEECS-
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCCCCCCceeEEEEcC-
Confidence 5678999999999987 445556555 99999999 999999998877653 589999999988764 7899999865
Q ss_pred hhhhcch--hhHHHHHHHHhcccccCeEEEccCC
Q 014247 188 GYMLLYE--SMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 188 ~~~l~~~--~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
.+++. .++..+++++.++|+|||.+++...
T Consensus 98 --~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 98 --TIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp --CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --hHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 33333 6789999999999999999997643
No 111
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.51 E-value=1e-13 Score=129.23 Aligned_cols=136 Identities=23% Similarity=0.332 Sum_probs=107.5
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE 177 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~ 177 (428)
...+...+...++.+|||+|||+|.++..+++. + ..+|+++|++ .+++.|+++++.+++.++++++++|+.+....+
T Consensus 82 ~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (255)
T 3mb5_A 82 AALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEE 161 (255)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCC
T ss_pred HHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCC
Confidence 345666667788999999999999999999998 4 5599999999 999999999999999888999999998764457
Q ss_pred ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhc
Q 014247 178 EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQC 257 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 257 (428)
+||+|+++. .+...+++.+.++|+|||.+++..... -....+...+++.
T Consensus 162 ~~D~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~~~~~~-----------------------~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 162 NVDHVILDL--------PQPERVVEHAAKALKPGGFFVAYTPCS-----------------------NQVMRLHEKLREF 210 (255)
T ss_dssp SEEEEEECS--------SCGGGGHHHHHHHEEEEEEEEEEESSH-----------------------HHHHHHHHHHHHT
T ss_pred CcCEEEECC--------CCHHHHHHHHHHHcCCCCEEEEEECCH-----------------------HHHHHHHHHHHHc
Confidence 899999854 234567889999999999998642210 0134556677888
Q ss_pred C--CCCceEEee
Q 014247 258 A--FEEPSVETI 267 (428)
Q Consensus 258 G--f~~~~~~~~ 267 (428)
| |..+.+...
T Consensus 211 g~~f~~~~~~e~ 222 (255)
T 3mb5_A 211 KDYFMKPRTINV 222 (255)
T ss_dssp GGGBSCCEEECC
T ss_pred CCCccccEEEEE
Confidence 8 988765543
No 112
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.51 E-value=4.8e-14 Score=131.66 Aligned_cols=109 Identities=15% Similarity=0.135 Sum_probs=82.9
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--- 175 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--- 175 (428)
+.+.+...+...++.+|||||||+|.++..+++.|+ +|+|+|+| .|++.|++++..+ +++.++.++..
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~ 104 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIP 104 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCC
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccc
Confidence 344556666778899999999999999999999976 89999999 9999999886543 23334433322
Q ss_pred ---CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 176 ---DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 176 ---~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
.++||+|+++.+.+.+ ...+...+++++.++| |||+++++.
T Consensus 105 ~~~~~~fD~Vv~~~~l~~~-~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 105 KELAGHFDFVLNDRLINRF-TTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp GGGTTCCSEEEEESCGGGS-CHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred cccCCCccEEEEhhhhHhC-CHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 4789999997632222 2345788999999999 999998763
No 113
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.51 E-value=6.6e-14 Score=127.77 Aligned_cols=150 Identities=22% Similarity=0.295 Sum_probs=107.4
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc--ccCC-Cc
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED--VEID-EE 178 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~--l~~~-~~ 178 (428)
.+.+.+. .++.+|||+|||+|.++..+++.| .+|+|+|++ .+++.++++. ..++.+|+.+ .+.+ ++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCc
Confidence 4455554 678899999999999999999986 599999999 8888776542 3788899887 3333 78
Q ss_pred eeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhh----------ccCCCCcc
Q 014247 179 VDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWR----------NVYGIDMS 248 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 248 (428)
||+|++.. .+++..++..+++++.++|+|||.+++..+..... ..........|. ....++..
T Consensus 94 fD~v~~~~---~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (230)
T 3cc8_A 94 FDCVIFGD---VLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHI----SVLAPLLAGNWTYTEYGLLDKTHIRFFTFN 166 (230)
T ss_dssp EEEEEEES---CGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSH----HHHHHHHTTCCCCBSSSTTBTTCCCCCCHH
T ss_pred cCEEEECC---hhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchH----HHHHHHhcCCceeccCCCCCcceEEEecHH
Confidence 99999865 56666678899999999999999999764321100 000000000111 12346788
Q ss_pred hhHHHHHhcCCCCceEEeecC
Q 014247 249 AMMPLAKQCAFEEPSVETITG 269 (428)
Q Consensus 249 ~l~~~l~~~Gf~~~~~~~~~~ 269 (428)
.+..+++++||+...+.....
T Consensus 167 ~~~~~l~~~Gf~~~~~~~~~~ 187 (230)
T 3cc8_A 167 EMLRMFLKAGYSISKVDRVYV 187 (230)
T ss_dssp HHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHHcCCeEEEEEeccc
Confidence 899999999999887776543
No 114
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.50 E-value=8.7e-14 Score=128.14 Aligned_cols=103 Identities=16% Similarity=0.221 Sum_probs=88.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---CCceeEEEEe
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI---DEEVDVIISE 185 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~---~~~~DlVvs~ 185 (428)
.++.+|||||||+|..+..+++.. ..+|+++|++ .+++.|+++++..++.++++++.+|+.+... +++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 577899999999999999999952 4599999999 9999999999999998789999999987532 5899999975
Q ss_pred cchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 186 WMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 186 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
. .......+++.+.++|+|||++++...
T Consensus 150 ~------~~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 150 A------AKAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp T------TSSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred C------cHHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 4 233477899999999999999997543
No 115
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.50 E-value=1.1e-13 Score=129.01 Aligned_cols=128 Identities=16% Similarity=0.163 Sum_probs=99.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC----CCceeEEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----DEEVDVIIS 184 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----~~~~DlVvs 184 (428)
.++.+|||||||+|..+..++.. +..+|+++|++ .+++.|++++..+++.+ ++++++|++++.. .++||+|+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhcccccCCCceEEEE
Confidence 46789999999999999999986 45599999999 99999999999999876 9999999998764 379999999
Q ss_pred ecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCCCCceE
Q 014247 185 EWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSV 264 (428)
Q Consensus 185 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 264 (428)
..+ .++..+++.+.++|||||++++..... ..+ .+..+...+.+.||....+
T Consensus 158 ~a~-------~~~~~ll~~~~~~LkpgG~l~~~~g~~----------~~~-----------e~~~~~~~l~~~G~~~~~~ 209 (249)
T 3g89_A 158 RAV-------APLCVLSELLLPFLEVGGAAVAMKGPR----------VEE-----------ELAPLPPALERLGGRLGEV 209 (249)
T ss_dssp ESS-------CCHHHHHHHHGGGEEEEEEEEEEECSC----------CHH-----------HHTTHHHHHHHHTEEEEEE
T ss_pred CCc-------CCHHHHHHHHHHHcCCCeEEEEEeCCC----------cHH-----------HHHHHHHHHHHcCCeEEEE
Confidence 652 246789999999999999988532110 000 1234566677788876655
Q ss_pred Eee
Q 014247 265 ETI 267 (428)
Q Consensus 265 ~~~ 267 (428)
..+
T Consensus 210 ~~~ 212 (249)
T 3g89_A 210 LAL 212 (249)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 116
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.50 E-value=8.6e-14 Score=136.17 Aligned_cols=156 Identities=14% Similarity=0.115 Sum_probs=113.1
Q ss_pred HHHhccCCCC-CCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEccccccc--CCCc
Q 014247 103 AIMQNQSFIE-GKVVVDVGCGTGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVE--IDEE 178 (428)
Q Consensus 103 ~i~~~~~~~~-~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~~~~ 178 (428)
.+...+...+ +.+|||||||+|.++..+++. +..+++++|+..+++.|++++...++.++++++.+|+.+.+ .++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 248 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGA 248 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCC
Confidence 3444444455 789999999999999999987 33489999998889999999998888888999999999876 6678
Q ss_pred eeEEEEecchhhhcchh--hHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhh--hh---hccCCCCcchhH
Q 014247 179 VDVIISEWMGYMLLYES--MLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESID--FW---RNVYGIDMSAMM 251 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~l~ 251 (428)
||+|++.. ++++.. ....+++++.+.|+|||++++....... ............ .+ .........++.
T Consensus 249 ~D~v~~~~---vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 323 (352)
T 3mcz_A 249 ADVVMLND---CLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND--DRVTPALSADFSLHMMVNTNHGELHPTPWIA 323 (352)
T ss_dssp EEEEEEES---CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT--TSSSSHHHHHHHHHHHHHSTTCCCCCHHHHH
T ss_pred ccEEEEec---ccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC--CCCCCchHHHhhHHHHhhCCCCCcCCHHHHH
Confidence 99999876 444443 3589999999999999999875432110 000011111111 11 112245678899
Q ss_pred HHHHhcCCCCce
Q 014247 252 PLAKQCAFEEPS 263 (428)
Q Consensus 252 ~~l~~~Gf~~~~ 263 (428)
.+++++||+...
T Consensus 324 ~ll~~aGf~~~~ 335 (352)
T 3mcz_A 324 GVVRDAGLAVGE 335 (352)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHHCCCceee
Confidence 999999998765
No 117
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.50 E-value=1.5e-13 Score=126.30 Aligned_cols=105 Identities=19% Similarity=0.295 Sum_probs=84.7
Q ss_pred HhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc----ccCCCc
Q 014247 105 MQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED----VEIDEE 178 (428)
Q Consensus 105 ~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~----l~~~~~ 178 (428)
.+.+...++.+|||+|||+|.++..+++. |..+|+|+|++ .+++.|++++..+ .++.++.+|+.+ +++.++
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~ 143 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIVEK 143 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTSCC
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccCcc
Confidence 33444567899999999999999999987 55699999999 9999998886554 469999999987 555578
Q ss_pred eeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 179 VDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
||+|+... ........+++++.++|+|||.+++.
T Consensus 144 ~D~v~~~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 144 VDVIYEDV-----AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEEECC-----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEec-----CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99999532 22333477899999999999999874
No 118
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.49 E-value=7.5e-14 Score=127.50 Aligned_cols=105 Identities=17% Similarity=0.294 Sum_probs=85.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-c-CC-----Ccee
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-E-ID-----EEVD 180 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~-~~-----~~~D 180 (428)
.++.+|||||||+|..+..+++. + ..+|+++|++ .+++.|++++..+++.++++++++|+.+. + .. ++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 46789999999999999999985 2 4599999999 99999999999999988899999998663 2 12 5899
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
+|++.. ...+......++..+ ++|+|||++++...
T Consensus 137 ~V~~d~---~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 137 MVFLDH---WKDRYLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp EEEECS---CGGGHHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEEEcC---CcccchHHHHHHHhc-cccCCCeEEEEeCC
Confidence 999865 233333345667777 99999999997654
No 119
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.49 E-value=8.4e-14 Score=127.63 Aligned_cols=116 Identities=16% Similarity=0.110 Sum_probs=92.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccc-ccccC--CCceeEEEEec
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRV-EDVEI--DEEVDVIISEW 186 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~-~~l~~--~~~~DlVvs~~ 186 (428)
.++.+|||||||+|.++..+++.+. +|+|+|++ .+++.|+++ ..+++++++|+ ..+++ +++||+|++.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGLGAPFGLIVSR- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEEEEE-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcCCCCEEEEEeC-
Confidence 5788999999999999999999966 99999999 999998877 23589999999 45554 3789999985
Q ss_pred chhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCCCCceEEe
Q 014247 187 MGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVET 266 (428)
Q Consensus 187 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 266 (428)
.++..+++++.++|||||.++. . ....+...+...+.++||....+..
T Consensus 119 --------~~~~~~l~~~~~~LkpgG~l~~------~------------------~~~~~~~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 119 --------RGPTSVILRLPELAAPDAHFLY------V------------------GPRLNVPEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp --------SCCSGGGGGHHHHEEEEEEEEE------E------------------ESSSCCTHHHHHHHHTTCEEEEEEE
T ss_pred --------CCHHHHHHHHHHHcCCCcEEEE------e------------------CCcCCHHHHHHHHHHCCCeEEEEEe
Confidence 2456778889999999999980 0 0123456788889999998766554
No 120
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.49 E-value=1.6e-13 Score=125.44 Aligned_cols=117 Identities=14% Similarity=0.226 Sum_probs=93.3
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCC-CcEEEEEcccccc
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLT-DKVIVLHGRVEDV 173 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~-~~v~~~~~d~~~l 173 (428)
..+...+.......++.+|||||||+|..+..+++. + ..+|+++|++ .+++.|+++++..++. ++++++++|+.++
T Consensus 42 ~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~ 121 (221)
T 3dr5_A 42 GQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV 121 (221)
T ss_dssp HHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH
T ss_pred HHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH
Confidence 344455555544344559999999999999999985 2 4599999999 9999999999999998 7899999998775
Q ss_pred c--C-CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCe
Q 014247 174 E--I-DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYAT 220 (428)
Q Consensus 174 ~--~-~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 220 (428)
. + +++||+|++.. .......+++.+.++|+|||++++....
T Consensus 122 l~~~~~~~fD~V~~d~------~~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 122 MSRLANDSYQLVFGQV------SPMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp GGGSCTTCEEEEEECC------CTTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred HHHhcCCCcCeEEEcC------cHHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 2 3 47999999854 2234667899999999999999987654
No 121
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=4.7e-13 Score=118.71 Aligned_cols=126 Identities=18% Similarity=0.246 Sum_probs=98.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-CceeEEEEe-cc
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEVDVIISE-WM 187 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~-~~ 187 (428)
.++.+|||+|||+|.++..+++.+. +|+|+|++ .+++.++++. .++.++++|+.+++.+ ++||+|++. .+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~i~~~~~~ 117 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDLIVSAGNV 117 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEEEEECCCC
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeEEEECCcH
Confidence 5788999999999999999999866 99999999 8998888764 2489999999987664 789999996 32
Q ss_pred hhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCCCCceEE
Q 014247 188 GYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSVE 265 (428)
Q Consensus 188 ~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 265 (428)
.+. ....+...+++.+.++|+|||.+++.... ..+++...+..+++++||+.....
T Consensus 118 ~~~-~~~~~~~~~l~~~~~~l~~~G~l~~~~~~---------------------~~~~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 118 MGF-LAEDGREPALANIHRALGADGRAVIGFGA---------------------GRGWVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp GGG-SCHHHHHHHHHHHHHHEEEEEEEEEEEET---------------------TSSCCHHHHHHHHHHHTEEEEEEE
T ss_pred Hhh-cChHHHHHHHHHHHHHhCCCCEEEEEeCC---------------------CCCcCHHHHHHHHHHcCCEEeeee
Confidence 211 12355789999999999999999864211 012567788889999999865543
No 122
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.49 E-value=1.8e-13 Score=134.24 Aligned_cols=157 Identities=19% Similarity=0.186 Sum_probs=112.6
Q ss_pred HHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEE
Q 014247 104 IMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVI 182 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlV 182 (428)
+.+.+...++.+|||||||+|.++..+++.+ ..+++++|+..+++.|++++..+++.++++++.+|+.+ +.+..||+|
T Consensus 175 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~D~v 253 (360)
T 1tw3_A 175 PAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPRKADAI 253 (360)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSSCEEEE
T ss_pred HHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCCCccEE
Confidence 4444555678899999999999999999874 34899999877899999999998888789999999876 344569999
Q ss_pred EEecchhhhcchhh--HHHHHHHHhcccccCeEEEccCCe-eeEeecCCccchhhhhhh----hhccCCCCcchhHHHHH
Q 014247 183 ISEWMGYMLLYESM--LGSVITARDRWLKRGGLILPSYAT-LYMAPVTHPDRYSESIDF----WRNVYGIDMSAMMPLAK 255 (428)
Q Consensus 183 vs~~~~~~l~~~~~--~~~~l~~~~~~LkpgG~lv~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~ 255 (428)
++.. .+++..+ ...+++++.++|+|||++++.... . +-.....+...... +.....++.+++..+++
T Consensus 254 ~~~~---vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 327 (360)
T 1tw3_A 254 ILSF---VLLNWPDHDAVRILTRCAEALEPGGRILIHERDDL---HENSFNEQFTELDLRMLVFLGGALRTREKWDGLAA 327 (360)
T ss_dssp EEES---CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBC---GGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHH
T ss_pred EEcc---cccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEecc---CCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHH
Confidence 9866 4444333 368999999999999998875432 1 10001111111111 11223356789999999
Q ss_pred hcCCCCceEEee
Q 014247 256 QCAFEEPSVETI 267 (428)
Q Consensus 256 ~~Gf~~~~~~~~ 267 (428)
++||+...+...
T Consensus 328 ~aGf~~~~~~~~ 339 (360)
T 1tw3_A 328 SAGLVVEEVRQL 339 (360)
T ss_dssp HTTEEEEEEEEE
T ss_pred HCCCeEEEEEeC
Confidence 999988776654
No 123
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=5.1e-14 Score=130.44 Aligned_cols=101 Identities=16% Similarity=0.007 Sum_probs=83.0
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC------CceeEE
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID------EEVDVI 182 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~------~~~DlV 182 (428)
..++.+|||||||+|.++..+++.+. +|+|+|+| .+++.|+++.. ..+++++++|+.+++.. ..||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccEE
Confidence 46778999999999999999999877 89999999 99999988752 23699999999886543 248999
Q ss_pred EEecchhhhcchh--hHHHHHHHHhcccccCeEEEccC
Q 014247 183 ISEWMGYMLLYES--MLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 183 vs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++.. .+++.. +...+++++.++|||||.+++..
T Consensus 129 ~~~~---~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 129 YMRT---GFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp EEES---SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEcc---hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9976 333333 68999999999999999877643
No 124
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.49 E-value=2.2e-14 Score=143.69 Aligned_cols=158 Identities=18% Similarity=0.279 Sum_probs=112.2
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEE-EEEcccccccC
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVI-VLHGRVEDVEI 175 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~-~~~~d~~~l~~ 175 (428)
..+.+.+.+.+...++.+|||||||+|.++..+++.|. +|+|+|+| .+++.|+++ +...... +...+...+++
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhccc
Confidence 44566666777667889999999999999999999877 99999999 999888765 3322111 22344445544
Q ss_pred C-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhh-hccCCCCcchhHHH
Q 014247 176 D-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFW-RNVYGIDMSAMMPL 253 (428)
Q Consensus 176 ~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~ 253 (428)
+ ++||+|++.. .++|..++..+++++.++|||||++++....... ......+ ..+| .+...++...+..+
T Consensus 168 ~~~~fD~I~~~~---vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~--~~~~~~~---~~~~~~~~~~~s~~~l~~l 239 (416)
T 4e2x_A 168 TEGPANVIYAAN---TLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGD--IVAKTSF---DQIFDEHFFLFSATSVQGM 239 (416)
T ss_dssp HHCCEEEEEEES---CGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHH--HHHHTCG---GGCSTTCCEECCHHHHHHH
T ss_pred CCCCEEEEEECC---hHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHH--hhhhcch---hhhhhhhhhcCCHHHHHHH
Confidence 3 8999999976 6777788999999999999999999975432110 0000000 0111 22334677899999
Q ss_pred HHhcCCCCceEEeec
Q 014247 254 AKQCAFEEPSVETIT 268 (428)
Q Consensus 254 l~~~Gf~~~~~~~~~ 268 (428)
++++||+...++.++
T Consensus 240 l~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 240 AQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHTTEEEEEEEEEC
T ss_pred HHHcCCEEEEEEEcc
Confidence 999999988877764
No 125
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.48 E-value=1e-13 Score=124.89 Aligned_cols=98 Identities=18% Similarity=0.236 Sum_probs=85.4
Q ss_pred CCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 112 EGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
++.+|||+|||+|.++..+++. +..+|+|+|++ .+++.|++++..+++.+ ++++++|+.+....++||+|++..+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPSEPPFDGVISRAF-- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCCCSCEEEEECSCS--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCccCCcCEEEEecc--
Confidence 5789999999999999999986 34599999999 99999999999988876 9999999998765589999998541
Q ss_pred hhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 190 MLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 190 ~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
..+..++..+.++|+|||.+++.
T Consensus 142 -----~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 142 -----ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp -----SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred -----CCHHHHHHHHHHhcCCCcEEEEE
Confidence 34778999999999999999864
No 126
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.47 E-value=9e-15 Score=135.25 Aligned_cols=103 Identities=20% Similarity=0.149 Sum_probs=88.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.++.+|||+|||+|.++..+++.+ .+|+|+|++ .+++.|++++..+++.++++++++|+.+++..++||+|+++.
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~--- 152 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSP--- 152 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECC---
T ss_pred cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECC---
Confidence 478899999999999999999987 599999999 999999999999988667999999999987668999999976
Q ss_pred hhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 190 MLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 190 ~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.+.+.......+..+.++|+|||.+++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 153 PWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 3334444444667788999999997754
No 127
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.47 E-value=1.8e-13 Score=131.73 Aligned_cols=109 Identities=11% Similarity=0.099 Sum_probs=87.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCC------CCCcEEEEEccccccc----C---C
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANN------LTDKVIVLHGRVEDVE----I---D 176 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~------~~~~v~~~~~d~~~l~----~---~ 176 (428)
.++.+|||||||+|.++..+++.+..+|+|+|+| .+++.|+++....+ ...+++++++|+.+++ + +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 3678999999999999999998766699999999 99999998876542 2346999999999875 3 2
Q ss_pred CceeEEEEecchhhh-cchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 177 EEVDVIISEWMGYML-LYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
++||+|++....+.+ ....++..+++++.++|+|||.+++...
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 589999997633222 3446678999999999999999987654
No 128
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.47 E-value=3.6e-13 Score=123.29 Aligned_cols=111 Identities=20% Similarity=0.308 Sum_probs=87.6
Q ss_pred HHHHHHHhc---cCCCCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc
Q 014247 99 TYRAAIMQN---QSFIEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED 172 (428)
Q Consensus 99 ~~~~~i~~~---~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 172 (428)
.+..+|..- +...+|.+|||+|||+|.++..+|+. | ..+|+|+|++ +|++.+++++.+. .++..+.+|..+
T Consensus 61 klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~ 137 (233)
T 4df3_A 61 KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARF 137 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTC
T ss_pred HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccC
Confidence 455666653 45789999999999999999999997 4 4599999999 9999988876543 358889888765
Q ss_pred cc---C-CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 173 VE---I-DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 173 l~---~-~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.. . .+.+|+|++.. .+..+...++.++.++|||||++++.
T Consensus 138 p~~~~~~~~~vDvVf~d~-----~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 138 PEKYRHLVEGVDGLYADV-----AQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp GGGGTTTCCCEEEEEECC-----CCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccccceEEEEEEec-----cCChhHHHHHHHHHHhccCCCEEEEE
Confidence 42 2 37899999743 23345788999999999999999864
No 129
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.47 E-value=2e-13 Score=127.05 Aligned_cols=103 Identities=17% Similarity=0.221 Sum_probs=87.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-cC---CCceeEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-EI---DEEVDVII 183 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~~---~~~~DlVv 183 (428)
.++.+|||||||+|..+..+++. + ..+|+++|++ .+++.|++++...++.++++++.+|+.+. +. .++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 56789999999999999999997 2 4599999999 99999999999999988899999998773 22 24899999
Q ss_pred EecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 184 SEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 184 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
+.. .......+++.+.++|+|||++++...
T Consensus 142 ~d~------~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 142 IDA------DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ECS------CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ECC------chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 854 234467789999999999999997654
No 130
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.47 E-value=5.6e-14 Score=127.86 Aligned_cols=152 Identities=15% Similarity=0.069 Sum_probs=99.2
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHH----HHCCCCCcEEEEEcccccccCCCceeEEE
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVV----KANNLTDKVIVLHGRVEDVEIDEEVDVII 183 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~----~~~~~~~~v~~~~~d~~~l~~~~~~DlVv 183 (428)
..++.+|||||||+|.++..+++.+ ..+|+|+|+| .|++.+.+.+ ...++. +++++++|+.+++.+...|.|+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERLPPLSGVGELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTCCSCCCEEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhCCCCCCCCEEE
Confidence 4678899999999999999999983 4599999999 8777543333 234454 5999999999988762227766
Q ss_pred Eecchhhh--cchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCC----cchhHHHHHhc
Q 014247 184 SEWMGYML--LYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGID----MSAMMPLAKQC 257 (428)
Q Consensus 184 s~~~~~~l--~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~ 257 (428)
.......+ ++..+...+++++.++|||||++++...... ..... .. ......+. ...+..++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----~~~~~-~~----~~~~~~~~~~~~~~~l~~~l~~a 174 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHA----WRPSV-PE----VGEHPEPTPDSADEWLAPRYAEA 174 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGG----BTTBC-GG----GTTCCCCCHHHHHHHHHHHHHHT
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccc----ccccc-cc----cccCCccchHHHHHHHHHHHHHc
Confidence 42211112 1334458899999999999999987321100 00000 00 01111112 23467788999
Q ss_pred CCCCceEEeecCCc
Q 014247 258 AFEEPSVETITGEN 271 (428)
Q Consensus 258 Gf~~~~~~~~~~~~ 271 (428)
||+...++.+....
T Consensus 175 Gf~i~~~~~~~~~~ 188 (218)
T 3mq2_A 175 GWKLADCRYLEPEE 188 (218)
T ss_dssp TEEEEEEEEECHHH
T ss_pred CCCceeeeccchhh
Confidence 99988877765443
No 131
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.47 E-value=2.9e-13 Score=122.76 Aligned_cols=101 Identities=20% Similarity=0.228 Sum_probs=79.2
Q ss_pred CCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc----cCCCceeEE
Q 014247 109 SFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV----EIDEEVDVI 182 (428)
Q Consensus 109 ~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l----~~~~~~DlV 182 (428)
...++.+|||+|||+|.++..+++. +..+|+|+|+| .+++.+.+.++.. .++.++.+|+.+. ++.++||+|
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~fD~V 130 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIVEKVDLI 130 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTCCCEEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccccceeEE
Confidence 4467899999999999999999886 34589999999 8877766665543 3588999998774 345889999
Q ss_pred EEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 183 ISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 183 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+++. ........+++++.++|||||++++.
T Consensus 131 ~~~~-----~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 131 YQDI-----AQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EECC-----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEec-----cChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 9863 22233556689999999999999875
No 132
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.47 E-value=3.7e-13 Score=121.55 Aligned_cols=110 Identities=21% Similarity=0.178 Sum_probs=88.6
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-C
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-D 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-~ 176 (428)
.....+.+.+...++.+|||||||+|.++..+++.+ .+|+++|++ .+++.|++++..+++. +++++.+|+.+... .
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccC
Confidence 344455566667889999999999999999999984 599999999 9999999999988886 59999999987544 3
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
++||+|++.. .+.+.. ..+.++|+|||++++...
T Consensus 142 ~~~D~i~~~~---~~~~~~------~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 142 APFDAIIVTA---APPEIP------TALMTQLDEGGILVLPVG 175 (210)
T ss_dssp CCEEEEEESS---BCSSCC------THHHHTEEEEEEEEEEEC
T ss_pred CCccEEEEcc---chhhhh------HHHHHhcccCcEEEEEEc
Confidence 7899999965 333332 256789999999987543
No 133
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.46 E-value=1.8e-13 Score=124.96 Aligned_cols=103 Identities=21% Similarity=0.213 Sum_probs=86.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC------CCceeE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI------DEEVDV 181 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~------~~~~Dl 181 (428)
.++.+|||||||+|..+..+++. + ..+|+++|++ .+++.|++++...++.++++++++|+.+... .++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 56789999999999999999997 2 3499999999 9999999999999998889999999876421 157999
Q ss_pred EEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 182 IISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
|++... ......+++.+.++|+|||++++...
T Consensus 137 v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 137 IFIDAD------KQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEECSC------GGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEcCC------cHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 998541 33467889999999999999987654
No 134
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.46 E-value=6.8e-14 Score=121.78 Aligned_cols=99 Identities=18% Similarity=0.105 Sum_probs=80.7
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----CCceeEEEEe
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-----DEEVDVIISE 185 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-----~~~~DlVvs~ 185 (428)
++.+|||+|||+|.++..+++.+. +|+|+|++ .+++.|++++..+++ +++++++|+.+... .++||+|+++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 778999999999999999999977 59999999 999999999988877 59999999887421 2379999997
Q ss_pred cchhhhcchhhHHHHHHHHh--cccccCeEEEccC
Q 014247 186 WMGYMLLYESMLGSVITARD--RWLKRGGLILPSY 218 (428)
Q Consensus 186 ~~~~~l~~~~~~~~~l~~~~--~~LkpgG~lv~~~ 218 (428)
...+ .....+++.+. ++|+|||.+++..
T Consensus 118 ~~~~-----~~~~~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 118 PPYA-----MDLAALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp CCTT-----SCTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred CCCc-----hhHHHHHHHHHhhcccCCCcEEEEEe
Confidence 6322 23445556665 9999999998754
No 135
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.46 E-value=3.6e-13 Score=132.98 Aligned_cols=117 Identities=21% Similarity=0.304 Sum_probs=94.7
Q ss_pred HHHHHHHHhcc--CCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc
Q 014247 98 ETYRAAIMQNQ--SFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE 174 (428)
Q Consensus 98 ~~~~~~i~~~~--~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~ 174 (428)
+.+.+.+...+ ...++.+|||+|||+|.++..+++.++ +|+++|++ .+++.|++++..+++. ++++++|+.+..
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~~~~ 293 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALK--AQALHSDVDEAL 293 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTS
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchhhcc
Confidence 44555555443 235788999999999999999999976 99999999 9999999999998874 899999999876
Q ss_pred CC-CceeEEEEecchhhh--cchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 ID-EEVDVIISEWMGYML--LYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 ~~-~~~DlVvs~~~~~~l--~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.+ ++||+|+++...+.. ........+++.+.++|+|||.+++.
T Consensus 294 ~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 294 TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 65 899999998632221 11456889999999999999999864
No 136
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.46 E-value=1.6e-13 Score=125.30 Aligned_cols=103 Identities=21% Similarity=0.203 Sum_probs=87.1
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC--C-----Ccee
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--D-----EEVD 180 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--~-----~~~D 180 (428)
.++.+|||||||+|..+..+++. + ..+|+++|++ .+++.|++++...++.++++++++|+.+... . ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 46789999999999999999987 2 4599999999 9999999999999998889999999866421 1 6899
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
+|++.. .......+++.+.++|+|||++++...
T Consensus 143 ~v~~~~------~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 143 LIYIDA------DKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEEECS------CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEECC------CHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999754 234577889999999999999997654
No 137
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.46 E-value=1.5e-13 Score=128.84 Aligned_cols=111 Identities=17% Similarity=0.156 Sum_probs=88.9
Q ss_pred hccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHH---CCCCCcEEEEEccccccc------
Q 014247 106 QNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKA---NNLTDKVIVLHGRVEDVE------ 174 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~---~~~~~~v~~~~~d~~~l~------ 174 (428)
..+...++.+|||+|||+|.+++.+++.. ..+|+|+|++ .+++.|++++.. +++.++++++++|+.++.
T Consensus 30 ~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~ 109 (260)
T 2ozv_A 30 SLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEA 109 (260)
T ss_dssp HTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHT
T ss_pred HHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhh
Confidence 34445678899999999999999999884 3599999999 999999999988 888878999999998872
Q ss_pred -C-CCceeEEEEecchhhh---------------cchhhHHHHHHHHhcccccCeEEEc
Q 014247 175 -I-DEEVDVIISEWMGYML---------------LYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 175 -~-~~~~DlVvs~~~~~~l---------------~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
+ +++||+|++++..+.. .....+..+++.+.++|+|||.+++
T Consensus 110 ~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 110 GLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp TCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 2 4789999998532111 0112378899999999999999986
No 138
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.46 E-value=4.5e-13 Score=122.78 Aligned_cols=106 Identities=19% Similarity=0.238 Sum_probs=84.9
Q ss_pred CCCCCEEEEEcCC-CcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc-C-CCceeEEEEe
Q 014247 110 FIEGKVVVDVGCG-TGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE-I-DEEVDVIISE 185 (428)
Q Consensus 110 ~~~~~~VLDiGcG-tG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~-~-~~~~DlVvs~ 185 (428)
..++.+|||+||| +|.++..+++.+..+|+|+|++ .+++.|++++..+++ +++++++|+..+. . +++||+|+++
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEEC
Confidence 3678999999999 9999999999844499999999 999999999999988 6999999975432 2 3899999997
Q ss_pred cchhhh----------------cchhhHHHHHHHHhcccccCeEEEcc
Q 014247 186 WMGYML----------------LYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 186 ~~~~~l----------------~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+..+.. .....+..+++.+.++|+|||++++.
T Consensus 131 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 131 PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 532111 11223578999999999999999863
No 139
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.45 E-value=3e-13 Score=131.29 Aligned_cols=157 Identities=16% Similarity=0.140 Sum_probs=110.9
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeE
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDV 181 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~Dl 181 (428)
.+.+.....+ .+|||||||+|.++..+++. +..+++++|+..+++.|++++...++.++++++.+|+.+ +.+++||+
T Consensus 159 ~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~D~ 236 (334)
T 2ip2_A 159 EIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPSNGDI 236 (334)
T ss_dssp HHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCSSCSE
T ss_pred HHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCCCCCE
Confidence 3444444445 89999999999999999987 334899999987888898888777777789999999987 55678999
Q ss_pred EEEecchhhhcchh--hHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhh--h--hccCCCCcchhHHHHH
Q 014247 182 IISEWMGYMLLYES--MLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDF--W--RNVYGIDMSAMMPLAK 255 (428)
Q Consensus 182 Vvs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~l~~~l~ 255 (428)
|++.. ++++.. ....+++++.+.|+|||++++...... -............ + ......+..++..+++
T Consensus 237 v~~~~---vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~---~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 310 (334)
T 2ip2_A 237 YLLSR---IIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS---ASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLG 310 (334)
T ss_dssp EEEES---CGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC---SSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHH
T ss_pred EEEch---hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC---CCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHH
Confidence 99876 444333 345899999999999999987654221 0001111111111 1 1122346788999999
Q ss_pred hcCCCCceEEee
Q 014247 256 QCAFEEPSVETI 267 (428)
Q Consensus 256 ~~Gf~~~~~~~~ 267 (428)
++||+...+...
T Consensus 311 ~aGf~~~~~~~~ 322 (334)
T 2ip2_A 311 RGGFAVERIVDL 322 (334)
T ss_dssp HTTEEEEEEEEE
T ss_pred HCCCceeEEEEC
Confidence 999988766544
No 140
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.45 E-value=1.9e-13 Score=132.55 Aligned_cols=106 Identities=21% Similarity=0.095 Sum_probs=88.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCC-cEEEEEcccccccC-----CCceeEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTD-KVIVLHGRVEDVEI-----DEEVDVII 183 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~-~v~~~~~d~~~l~~-----~~~~DlVv 183 (428)
.++.+|||+|||+|.+++.+++.|+ +|+++|+| .+++.|++++..+++.+ +++++++|+.++.. .++||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 4678999999999999999999988 99999999 99999999999999876 59999999987532 36899999
Q ss_pred Eecchhh-------hcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 184 SEWMGYM-------LLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 184 s~~~~~~-------l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+++..+. +....+...++..+.++|+|||.+++.
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~ 271 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVL 271 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 9764221 223456788999999999999987653
No 141
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.45 E-value=3.2e-13 Score=126.38 Aligned_cols=110 Identities=22% Similarity=0.271 Sum_probs=86.5
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
....+.+...+. ++.+|||||||+|.++..+++.+. +|+|+|+| .+++.|+++.. . .++++|+.+++++
T Consensus 42 ~~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~~~~ 111 (260)
T 2avn_A 42 RLIGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDLPFP 111 (260)
T ss_dssp HHHHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSCCSC
T ss_pred HHHHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHCCCC
Confidence 344555555543 788999999999999999999876 89999999 99999887643 1 2788999988764
Q ss_pred -CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 177 -EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 177 -~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
++||+|++... .++...++..+++++.++|+|||.+++...
T Consensus 112 ~~~fD~v~~~~~--~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 112 SGAFEAVLALGD--VLSYVENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp TTCEEEEEECSS--HHHHCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEEEEcch--hhhccccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 78999998531 233324589999999999999999997643
No 142
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.45 E-value=2.1e-13 Score=128.32 Aligned_cols=107 Identities=21% Similarity=0.192 Sum_probs=90.3
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCce
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEV 179 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 179 (428)
+..+...+ .+|.+|||+|||+|.+++.+|+.|+.+|+++|++ ..++.++++++.|++.++++++++|+.++...+.|
T Consensus 116 r~ri~~~~--~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~ 193 (278)
T 3k6r_A 116 RVRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIA 193 (278)
T ss_dssp HHHHHHHC--CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCE
T ss_pred HHHHHHhc--CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCC
Confidence 44555554 6899999999999999999999988899999999 99999999999999999999999999998777899
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
|.|+.+.+... ..++..+.++|++||.+.+
T Consensus 194 D~Vi~~~p~~~-------~~~l~~a~~~lk~gG~ih~ 223 (278)
T 3k6r_A 194 DRILMGYVVRT-------HEFIPKALSIAKDGAIIHY 223 (278)
T ss_dssp EEEEECCCSSG-------GGGHHHHHHHEEEEEEEEE
T ss_pred CEEEECCCCcH-------HHHHHHHHHHcCCCCEEEE
Confidence 99998653221 2345566688999998864
No 143
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.45 E-value=1.7e-13 Score=134.74 Aligned_cols=149 Identities=13% Similarity=0.107 Sum_probs=107.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccc--cCCCceeEEEEecc
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDV--EIDEEVDVIISEWM 187 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l--~~~~~~DlVvs~~~ 187 (428)
....+|||||||+|.++..+++.. ..+++++|+..+++.|++++...++.++++++.+|+.+. +.+++||+|++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~- 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ- 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES-
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec-
Confidence 456899999999999999999862 348999999889999999988888878899999999886 3557899999876
Q ss_pred hhhhcch--hhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccc--h--h-hhhhh--hhc--cCCCCcchhHHHHHh
Q 014247 188 GYMLLYE--SMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDR--Y--S-ESIDF--WRN--VYGIDMSAMMPLAKQ 256 (428)
Q Consensus 188 ~~~l~~~--~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~--~--~-~~~~~--~~~--~~~~~~~~l~~~l~~ 256 (428)
++++. .+...+++++.+.|+|||++++....... ..... + . ....+ +.. ....+..++..++++
T Consensus 257 --vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 331 (363)
T 3dp7_A 257 --FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR---QRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIEN 331 (363)
T ss_dssp --CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS---CSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHT
T ss_pred --hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC---ccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHH
Confidence 44433 34568899999999999999875432110 00000 0 0 00001 011 112367889999999
Q ss_pred cCCCCceEE
Q 014247 257 CAFEEPSVE 265 (428)
Q Consensus 257 ~Gf~~~~~~ 265 (428)
+||+.+.+.
T Consensus 332 AGf~~v~~~ 340 (363)
T 3dp7_A 332 AGLEVEEIQ 340 (363)
T ss_dssp TTEEESCCC
T ss_pred cCCeEEEEE
Confidence 999876544
No 144
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.44 E-value=3e-13 Score=132.22 Aligned_cols=154 Identities=16% Similarity=0.164 Sum_probs=104.9
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeE
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDV 181 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~Dl 181 (428)
.+.+.....++.+|||||||+|.++..+++.. ..+++++|++.++. ++++...++.++++++.+|+. .+.+ +||+
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p-~~D~ 250 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA--RHRLDAPDVAGRWKVVEGDFL-REVP-HADV 250 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT--TCCCCCGGGTTSEEEEECCTT-TCCC-CCSE
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh--cccccccCCCCCeEEEecCCC-CCCC-CCcE
Confidence 34445555678899999999999999999863 33899999985544 333333455678999999996 3444 8999
Q ss_pred EEEecchhhhcchhhH--HHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhh--hhh--ccCCCCcchhHHHHH
Q 014247 182 IISEWMGYMLLYESML--GSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESID--FWR--NVYGIDMSAMMPLAK 255 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~l~~~l~ 255 (428)
|++.. ++++..+. ..++++++++|||||++++....... ........... .+. .....+.+++..+++
T Consensus 251 v~~~~---vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~---~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~ 324 (348)
T 3lst_A 251 HVLKR---ILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE---GNDAHQSKEMDFMMLAARTGQERTAAELEPLFT 324 (348)
T ss_dssp EEEES---CGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS---SSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHH
T ss_pred EEEeh---hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC---CCCcchhhhcChhhhhcCCCcCCCHHHHHHHHH
Confidence 99876 55555544 69999999999999999875532211 11111111111 111 112345788999999
Q ss_pred hcCCCCceEEe
Q 014247 256 QCAFEEPSVET 266 (428)
Q Consensus 256 ~~Gf~~~~~~~ 266 (428)
++||+...+..
T Consensus 325 ~aGf~~~~~~~ 335 (348)
T 3lst_A 325 AAGLRLDRVVG 335 (348)
T ss_dssp HTTEEEEEEEE
T ss_pred HCCCceEEEEE
Confidence 99998876654
No 145
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.44 E-value=3e-13 Score=123.41 Aligned_cols=105 Identities=12% Similarity=0.125 Sum_probs=83.4
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-c---CCCceeEEEEe
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-E---IDEEVDVIISE 185 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~---~~~~~DlVvs~ 185 (428)
++.+|||||||+|.++..+|+.. ...|+|||++ .++..|++++..+++.+ +.++++|+.++ + .+++||.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~n-v~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSN-LRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSS-EEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCc-EEEEECCHHHHHHHHcCCCChheEEEe
Confidence 56899999999999999999874 3489999999 99999999999998875 99999999885 2 24899999985
Q ss_pred cchhhhcchhh------HHHHHHHHhcccccCeEEEccC
Q 014247 186 WMGYMLLYESM------LGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 186 ~~~~~l~~~~~------~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
.... ...... ...+++.+.++|||||.+++.+
T Consensus 113 ~~~p-~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 113 FPDP-WHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SCCC-CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCC-ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 3111 111111 1358999999999999998653
No 146
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.44 E-value=5.1e-13 Score=126.68 Aligned_cols=116 Identities=20% Similarity=0.278 Sum_probs=88.6
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeC-h-HHHHHHHHHH-----HHCCCC----CcEEEE
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDA-S-DIAVQANEVV-----KANNLT----DKVIVL 166 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~-s-~~~~~a~~~~-----~~~~~~----~~v~~~ 166 (428)
..+.+.+.......++.+|||||||+|.++..+++.|+.+|+|+|+ + .+++.|++++ ..+++. ++++++
T Consensus 65 ~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~ 144 (281)
T 3bzb_A 65 RALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVV 144 (281)
T ss_dssp HHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEE
T ss_pred HHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEE
Confidence 3456666666555678899999999999999999988779999999 8 9999999998 555554 468888
Q ss_pred Eccccc----cc---CCCceeEEEEecchhhhcchhhHHHHHHHHhcccc---c--CeEEEc
Q 014247 167 HGRVED----VE---IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLK---R--GGLILP 216 (428)
Q Consensus 167 ~~d~~~----l~---~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~Lk---p--gG~lv~ 216 (428)
..+..+ +. ..++||+|++.. ++.+..+...+++.+.++|+ | ||++++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~fD~Ii~~d---vl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 145 PYRWGDSPDSLQRCTGLQRFQVVLLAD---LLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp ECCTTSCTHHHHHHHSCSSBSEEEEES---CCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred EecCCCccHHHHhhccCCCCCEEEEeC---cccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 666433 21 247899999844 56667778999999999999 9 998765
No 147
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.44 E-value=8.8e-13 Score=115.80 Aligned_cols=108 Identities=25% Similarity=0.347 Sum_probs=89.2
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID- 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~- 176 (428)
...+.+...+...++.+|||+|||+|.++..+++ +..+|+|+|++ .+++.|++++..+++. +++++++|+.+ +++
T Consensus 22 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~~-~~~~ 98 (183)
T 2yxd_A 22 EIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAED-VLDK 98 (183)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHHH-HGGG
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCccc-cccC
Confidence 3445555555667889999999999999999999 56699999999 9999999999998884 59999999987 333
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++||+|++... .++..+++.+.++ |||.+++..
T Consensus 99 ~~~D~i~~~~~-------~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 99 LEFNKAFIGGT-------KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp CCCSEEEECSC-------SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred CCCcEEEECCc-------ccHHHHHHHHhhC--CCCEEEEEe
Confidence 68999999653 4578889998887 999998653
No 148
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.44 E-value=8.6e-13 Score=131.49 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=90.2
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHH-------HHHHHHCCCC-CcEEEEEcc
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQA-------NEVVKANNLT-DKVIVLHGR 169 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a-------~~~~~~~~~~-~~v~~~~~d 169 (428)
....+.+.+...++.+|||||||+|.++..+|+. |..+|+|+|++ .+++.| ++++...++. .+++++++|
T Consensus 230 ~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD 309 (433)
T 1u2z_A 230 FLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK 309 (433)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcC
Confidence 3445556666778999999999999999999986 66789999999 888888 8888888853 569999875
Q ss_pred cccc--c---CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 170 VEDV--E---IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 170 ~~~l--~---~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
.... + ..++||+|+++. .+ ...++..++.++.+.|||||++++..
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~---~l-~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNN---FL-FDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECC---TT-CCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred ccccccccccccCCCCEEEEeC---cc-ccccHHHHHHHHHHhCCCCeEEEEee
Confidence 4321 1 137899999864 23 23567888999999999999998764
No 149
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.43 E-value=5.6e-13 Score=120.96 Aligned_cols=106 Identities=18% Similarity=0.178 Sum_probs=84.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--C-CCceeEEEEe
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--I-DEEVDVIISE 185 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~-~~~~DlVvs~ 185 (428)
.++.+|||||||+|.++..+++.. ..+|+|+|++ .++..|++++..+++ .++.++++|+.+++ + +++||+|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 457899999999999999999873 3499999999 999999999998888 46999999998876 4 3789999987
Q ss_pred cchhhhc--ch---hhHHHHHHHHhcccccCeEEEcc
Q 014247 186 WMGYMLL--YE---SMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 186 ~~~~~l~--~~---~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
....... +. .....++..+.++|+|||.+++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 5211000 00 02367899999999999999864
No 150
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.43 E-value=6.8e-13 Score=130.78 Aligned_cols=116 Identities=16% Similarity=0.116 Sum_probs=92.0
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCC--cEEEEEcccccccCC
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTD--KVIVLHGRVEDVEID 176 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~--~v~~~~~d~~~l~~~ 176 (428)
.+.+.+.+...++.+|||+|||+|.++..+++.+ ..+|+|+|+| .+++.|++++..+++.+ +++++.+|+.+...+
T Consensus 211 ~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~ 290 (375)
T 4dcm_A 211 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 290 (375)
T ss_dssp HHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCT
T ss_pred HHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCC
Confidence 4455666666677899999999999999999984 4599999999 99999999999988754 588899999874444
Q ss_pred CceeEEEEecchhhhc--chhhHHHHHHHHhcccccCeEEEc
Q 014247 177 EEVDVIISEWMGYMLL--YESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~--~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
++||+|+++...+... .......+++.+.++|+|||++++
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 7999999987432211 122345789999999999999986
No 151
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.42 E-value=8.8e-13 Score=138.18 Aligned_cols=116 Identities=15% Similarity=0.150 Sum_probs=91.0
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCC--CeEEEEeCh-HHHHHHHHHHHHC------CCCCcEEEEEccc
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGA--KRVYAVDAS-DIAVQANEVVKAN------NLTDKVIVLHGRV 170 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~--~~V~giD~s-~~~~~a~~~~~~~------~~~~~v~~~~~d~ 170 (428)
..+.+.+.+...++.+|||||||+|.++..+++.+. .+|+|+|++ .|++.|++++... ++. +++++++|+
T Consensus 709 Rle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~-nVefiqGDa 787 (950)
T 3htx_A 709 RVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK-SATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS-EEEEEESCT
T ss_pred HHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC-ceEEEECch
Confidence 344444444445789999999999999999999862 599999999 9999998866532 333 699999999
Q ss_pred ccccCC-CceeEEEEecchhhhcchhh--HHHHHHHHhcccccCeEEEccCCe
Q 014247 171 EDVEID-EEVDVIISEWMGYMLLYESM--LGSVITARDRWLKRGGLILPSYAT 220 (428)
Q Consensus 171 ~~l~~~-~~~DlVvs~~~~~~l~~~~~--~~~~l~~~~~~LkpgG~lv~~~~~ 220 (428)
.+++.. ++||+|++.. .++|..+ ...+++++.++|||| .+++..++
T Consensus 788 ~dLp~~d~sFDlVV~~e---VLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLE---VIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp TSCCTTSCSCCEEEEES---CGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred HhCCcccCCeeEEEEeC---chhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 998875 8999999965 4555443 446899999999999 77766544
No 152
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.42 E-value=8.3e-14 Score=125.74 Aligned_cols=120 Identities=21% Similarity=0.090 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHhccCC-CCCCEEEEEcCCCcHHHHHHHHcCC-CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccc
Q 014247 95 VRTETYRAAIMQNQSF-IEGKVVVDVGCGTGILSIFCAQAGA-KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVE 171 (428)
Q Consensus 95 ~r~~~~~~~i~~~~~~-~~~~~VLDiGcGtG~ls~~la~~g~-~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~ 171 (428)
...+.+.+.+.+.+.. .++.+|||+|||+|.++..+++.+. .+|+|+|++ .+++.|++++..++. +++++++|+.
T Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~ 89 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGI 89 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHH
T ss_pred ccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchH
Confidence 3344556666666544 6788999999999999999999843 399999999 999999999888776 6899999988
Q ss_pred cccCC-----CceeEEEEecchhhhc-----------------------chhhHHHHHHHHhcccccCeE-EEc
Q 014247 172 DVEID-----EEVDVIISEWMGYMLL-----------------------YESMLGSVITARDRWLKRGGL-ILP 216 (428)
Q Consensus 172 ~l~~~-----~~~DlVvs~~~~~~l~-----------------------~~~~~~~~l~~~~~~LkpgG~-lv~ 216 (428)
+.... ++||+|+++...+... .......+++.+.++|+|||+ +++
T Consensus 90 ~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 90 EWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp HHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred hhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 73222 7999999975211100 001127788999999999999 554
No 153
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.42 E-value=1.2e-13 Score=128.89 Aligned_cols=150 Identities=10% Similarity=0.063 Sum_probs=94.8
Q ss_pred CCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc---cCC----CceeEE
Q 014247 112 EGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV---EID----EEVDVI 182 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l---~~~----~~~DlV 182 (428)
++.+|||+|||+|.++..+++. ...+|+|+|++ .+++.|++++..+++.++++++++|+.+. .++ ++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 5779999999999999888876 23599999999 99999999999999988899999997762 232 489999
Q ss_pred EEecchhhhc-c---h--------hhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCC--Ccc
Q 014247 183 ISEWMGYMLL-Y---E--------SMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGI--DMS 248 (428)
Q Consensus 183 vs~~~~~~l~-~---~--------~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 248 (428)
++++..+... . . .....++..+.++|||||.+.+...... ....+.....+.....+. ...
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~-----~~~~~l~~~g~~~~~~~~~~~~~ 219 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIH-----DSLQLKKRLRWYSCMLGKKCSLA 219 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHHH-----HHHHHGGGBSCEEEEESSTTSHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHH-----HHHhcccceEEEEECCCChhHHH
Confidence 9986322111 0 0 0123456788999999998765421000 000000000000001121 235
Q ss_pred hhHHHHHhcCCCCceEEe
Q 014247 249 AMMPLAKQCAFEEPSVET 266 (428)
Q Consensus 249 ~l~~~l~~~Gf~~~~~~~ 266 (428)
.+.++++++||..+.+..
T Consensus 220 ~~~~~l~~~Gf~~v~~~~ 237 (254)
T 2h00_A 220 PLKEELRIQGVPKVTYTE 237 (254)
T ss_dssp HHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHcCCCceEEEE
Confidence 677889999998765543
No 154
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.42 E-value=6.2e-13 Score=131.69 Aligned_cols=108 Identities=22% Similarity=0.174 Sum_probs=89.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCC-cEEEEEcccccccC-----CCceeEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTD-KVIVLHGRVEDVEI-----DEEVDVII 183 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~-~v~~~~~d~~~l~~-----~~~~DlVv 183 (428)
.++.+|||+|||+|.+++.+|+.|+++|+|+|+| .+++.|+++++.|++.+ +++++++|+.+... ..+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 5788999999999999999999888899999999 99999999999999975 79999999877321 25899999
Q ss_pred Eecchh------hhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 184 SEWMGY------MLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 184 s~~~~~------~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+++..+ ..........++..+.++|+|||.++++.
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 976432 11223446678888899999999998754
No 155
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.42 E-value=5.6e-13 Score=126.53 Aligned_cols=124 Identities=21% Similarity=0.240 Sum_probs=93.8
Q ss_pred ChhhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccc
Q 014247 93 DRVRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVE 171 (428)
Q Consensus 93 d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~ 171 (428)
....++.+.+.+...+...++.+|||+|||+|.++..+++.+..+|+|+|+| .+++.|++++..+++.++++++++|+.
T Consensus 104 pr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~ 183 (284)
T 1nv8_A 104 PRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFL 183 (284)
T ss_dssp CCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTT
T ss_pred cChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcch
Confidence 3344556666665554334667999999999999999998734499999999 999999999999999888999999998
Q ss_pred cccCCCce---eEEEEecchhh--------hcchhh--------HHHHHHHHh-cccccCeEEEcc
Q 014247 172 DVEIDEEV---DVIISEWMGYM--------LLYESM--------LGSVITARD-RWLKRGGLILPS 217 (428)
Q Consensus 172 ~l~~~~~~---DlVvs~~~~~~--------l~~~~~--------~~~~l~~~~-~~LkpgG~lv~~ 217 (428)
+. .+++| |+|++++.... +.+++. ...+++.+. +.|+|||.+++.
T Consensus 184 ~~-~~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 184 EP-FKEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp GG-GGGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred hh-cccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 73 23578 99999742110 002221 126788999 999999999864
No 156
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.42 E-value=1.5e-13 Score=127.36 Aligned_cols=104 Identities=16% Similarity=0.129 Sum_probs=87.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-------CCcee
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-------DEEVD 180 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-------~~~~D 180 (428)
.++.+|||||||+|..+..+|+. + ..+|+++|++ .+++.|+++++..++.++++++.+|+.+... .++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 46789999999999999999986 2 4599999999 9999999999999998889999999876422 37899
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCe
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYAT 220 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 220 (428)
+|++.. .......+++.+.++|+|||++++....
T Consensus 139 ~V~~d~------~~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 139 FIFIDA------DKTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEEEES------CGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEEcC------ChHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 999864 1344677899999999999999986543
No 157
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.41 E-value=7.1e-13 Score=120.39 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=83.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--C-CCceeEEEEe
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--I-DEEVDVIISE 185 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~-~~~~DlVvs~ 185 (428)
.++.+|||||||+|.++..+|+. +..+|+|+|+| .++..|++++..+++. ++.++++|+.+++ + ++.||.|++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 35679999999999999999987 34589999999 9999999999998885 4999999998864 3 3789999875
Q ss_pred cchhhhc--ch---hhHHHHHHHHhcccccCeEEEcc
Q 014247 186 WMGYMLL--YE---SMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 186 ~~~~~l~--~~---~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
....... +. .....+++.+.++|+|||.+++.
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 3110000 00 11367899999999999999864
No 158
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.41 E-value=8.7e-13 Score=121.27 Aligned_cols=103 Identities=20% Similarity=0.268 Sum_probs=87.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-c-C--CCceeEEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-E-I--DEEVDVIIS 184 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~-~--~~~~DlVvs 184 (428)
.++.+|||||||+|.++..+++.. ..+|+++|++ .+++.|++++...++.++++++.+|+.+. + . +++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 577899999999999999999873 4599999999 99999999999999887899999998874 2 1 478999998
Q ss_pred ecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 185 EWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 185 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
.. .. .....+++.+.++|+|||++++...
T Consensus 133 ~~---~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 133 DA---AK---GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EG---GG---SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CC---CH---HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 65 22 2578899999999999999997643
No 159
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.41 E-value=4.5e-12 Score=116.22 Aligned_cols=111 Identities=18% Similarity=0.217 Sum_probs=80.8
Q ss_pred HHHHHHHhcc---CCCCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc
Q 014247 99 TYRAAIMQNQ---SFIEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED 172 (428)
Q Consensus 99 ~~~~~i~~~~---~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 172 (428)
.....+...+ ...+|.+|||+|||+|.++..+|+. + ..+|+|+|++ .|++.+.+.++.. .++.++.+|+..
T Consensus 60 kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~ 136 (232)
T 3id6_C 60 KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARF 136 (232)
T ss_dssp HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTC
T ss_pred HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEccccc
Confidence 3445555544 3678999999999999999999986 3 4599999999 8876655555443 359999999876
Q ss_pred cc----CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 173 VE----IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 173 l~----~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.. ..++||+|+++.. . ......++..+.++|||||++++.
T Consensus 137 ~~~~~~~~~~~D~I~~d~a---~--~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 137 PQSYKSVVENVDVLYVDIA---Q--PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp GGGTTTTCCCEEEEEECCC---C--TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhhccccceEEEEecCC---C--hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 43 2378999999741 1 222334455666699999999875
No 160
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.41 E-value=6.7e-13 Score=120.06 Aligned_cols=102 Identities=24% Similarity=0.315 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-cC-CCceeEEEEe
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-EI-DEEVDVIISE 185 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~~-~~~~DlVvs~ 185 (428)
.++.+|||||||+|..+..+++. + ..+|+++|++ .+++.|++++...++.++++++++|+.+. +. ++ ||+|++.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 45689999999999999999987 2 3599999999 99999999999888877899999998764 32 36 9999986
Q ss_pred cchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 186 WMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 186 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
. .......+++.+.++|+|||++++...
T Consensus 134 ~------~~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 134 C------DVFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp T------TTSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred C------ChhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 3 124577889999999999999997654
No 161
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.40 E-value=1.1e-12 Score=126.43 Aligned_cols=111 Identities=22% Similarity=0.161 Sum_probs=89.5
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCC--CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGA--KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI 175 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~--~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~ 175 (428)
...+.+.+.+...++.+|||||||+|.++..+++.+. .+|+|+|++ .+++.|++++..+++.+ ++++.+|+.+...
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhccc
Confidence 3445566666678899999999999999999998743 369999999 99999999999988876 9999999988543
Q ss_pred -CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 176 -DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 176 -~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
.++||+|++.. .+.+.. +.+.++|||||++++...
T Consensus 141 ~~~~fD~Iv~~~---~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 141 EFSPYDVIFVTV---GVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GGCCEEEEEECS---BBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred cCCCeEEEEEcC---CHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 47899999976 333332 466789999999987644
No 162
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.40 E-value=3e-13 Score=123.95 Aligned_cols=156 Identities=12% Similarity=0.059 Sum_probs=95.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-H-HHHHH---HHHHHHCCCCCcEEEEEcccccccCC--CceeEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-D-IAVQA---NEVVKANNLTDKVIVLHGRVEDVEID--EEVDVI 182 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~-~~~~a---~~~~~~~~~~~~v~~~~~d~~~l~~~--~~~DlV 182 (428)
.++.+|||||||+|.++..+++. ...+|+|+|+| + |++.| ++++...++. ++.++++|+++++.. ..+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhccCeEEEE
Confidence 57789999999999999999964 33489999999 5 44444 7777777775 499999999988531 445555
Q ss_pred EEecchhh-hc-chhhHHHHHHHHhcccccCeEEEccCC-eeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCC
Q 014247 183 ISEWMGYM-LL-YESMLGSVITARDRWLKRGGLILPSYA-TLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAF 259 (428)
Q Consensus 183 vs~~~~~~-l~-~~~~~~~~l~~~~~~LkpgG~lv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 259 (428)
++...... .. ...+...+++++.++|||||.+++... ......... ... ........+ +...++..++.++||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~--~~~-~~~~~~~~~-~~~~el~~~l~~aGf 177 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEI--KKR-GLPLLSKAY-FLSEQYKAELSNSGF 177 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC-----------------CCHHH-HHSHHHHHHHHHHTC
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchh--hhc-CCCCCChhh-cchHHHHHHHHHcCC
Confidence 54321101 00 111235789999999999999987211 000000000 000 000000000 111248888999999
Q ss_pred CCceEEeecCCc
Q 014247 260 EEPSVETITGEN 271 (428)
Q Consensus 260 ~~~~~~~~~~~~ 271 (428)
+...++.++...
T Consensus 178 ~v~~~~~~~~~~ 189 (225)
T 3p2e_A 178 RIDDVKELDNEY 189 (225)
T ss_dssp EEEEEEEECHHH
T ss_pred CeeeeeecCHHH
Confidence 988888776543
No 163
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.40 E-value=7.8e-13 Score=122.98 Aligned_cols=103 Identities=19% Similarity=0.173 Sum_probs=86.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-c-C------CCce
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-E-I------DEEV 179 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~-~------~~~~ 179 (428)
.++++|||||||+|..+..+++. + ..+|+++|++ .+++.|++++...++.++++++.+|+.+. + + .++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 46789999999999999999987 2 3599999999 99999999999999888899999998764 2 1 4789
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
|+|++.. . ......+++.+.++|+|||++++...
T Consensus 158 D~V~~d~---~---~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 158 DFIFVDA---D---KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp SEEEECS---C---STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred EEEEEcC---c---hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 9999854 1 23467889999999999999987643
No 164
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.40 E-value=1.3e-12 Score=119.73 Aligned_cols=107 Identities=16% Similarity=0.228 Sum_probs=85.5
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-ccCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-VEID 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-l~~~ 176 (428)
...+.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|++ .+++.|++++...+ +++++.+|+.+ ++..
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~ 132 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEE 132 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccC
Confidence 444555666666788999999999999999999987 599999999 99999999887665 69999999987 3334
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++||+|++.. .+.+.. ..+.++|+|||++++..
T Consensus 133 ~~fD~v~~~~---~~~~~~------~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 133 KPYDRVVVWA---TAPTLL------CKPYEQLKEGGIMILPI 165 (231)
T ss_dssp CCEEEEEESS---BBSSCC------HHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECC---cHHHHH------HHHHHHcCCCcEEEEEE
Confidence 7899999865 333322 35778999999998754
No 165
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.39 E-value=4.3e-13 Score=124.76 Aligned_cols=115 Identities=15% Similarity=0.080 Sum_probs=86.0
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc---CCCeEEEEeCh-HHHHHHHHHHHHC---CCCCc------------
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA---GAKRVYAVDAS-DIAVQANEVVKAN---NLTDK------------ 162 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~---g~~~V~giD~s-~~~~~a~~~~~~~---~~~~~------------ 162 (428)
+.+...+...++.+|||+|||+|.++..+++. +..+|+|+|+| .+++.|++++..+ ++.++
T Consensus 41 ~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (250)
T 1o9g_A 41 QRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFG 120 (250)
T ss_dssp HHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcc
Confidence 33344433346789999999999999999886 23489999999 9999999887765 44332
Q ss_pred -------------EE-------------EEEccccccc------CCCceeEEEEecchhhhcc------hhhHHHHHHHH
Q 014247 163 -------------VI-------------VLHGRVEDVE------IDEEVDVIISEWMGYMLLY------ESMLGSVITAR 204 (428)
Q Consensus 163 -------------v~-------------~~~~d~~~l~------~~~~~DlVvs~~~~~~l~~------~~~~~~~l~~~ 204 (428)
++ ++++|+.+.. ...+||+|++++....... ......+++++
T Consensus 121 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~ 200 (250)
T 1o9g_A 121 KPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSL 200 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHH
T ss_pred cccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHH
Confidence 66 9999988754 2348999999863222221 24577899999
Q ss_pred hcccccCeEEEc
Q 014247 205 DRWLKRGGLILP 216 (428)
Q Consensus 205 ~~~LkpgG~lv~ 216 (428)
.++|+|||++++
T Consensus 201 ~~~LkpgG~l~~ 212 (250)
T 1o9g_A 201 ASALPAHAVIAV 212 (250)
T ss_dssp HHHSCTTCEEEE
T ss_pred HHhcCCCcEEEE
Confidence 999999999986
No 166
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.39 E-value=2.1e-12 Score=118.78 Aligned_cols=103 Identities=20% Similarity=0.246 Sum_probs=82.4
Q ss_pred ccCCCCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc---cC-CCce
Q 014247 107 NQSFIEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV---EI-DEEV 179 (428)
Q Consensus 107 ~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l---~~-~~~~ 179 (428)
.+...++.+|||+|||+|.++..+++. | ..+|+|+|++ .+++.+.++++.+ .+++++++|+.+. +. .++|
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCE
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcE
Confidence 344567899999999999999999987 3 4699999999 8888888887775 4699999999873 22 4789
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
|+|+++.. .......++.++.++|||||.+++.
T Consensus 149 D~V~~~~~-----~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 149 DVIFADVA-----QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp EEEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEcCC-----CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 99999652 2233456688899999999999874
No 167
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.38 E-value=4.2e-13 Score=117.45 Aligned_cols=119 Identities=13% Similarity=0.054 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.++.+|||+|||+|.++..+++.+ +|+|+|+| .+++. .++++++++|+.+...+++||+|+++...+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES----------HRGGNLVRADLLCSINQESVDVVVFNPPYV 89 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT----------CSSSCEEECSTTTTBCGGGCSEEEECCCCB
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc----------ccCCeEEECChhhhcccCCCCEEEECCCCc
Confidence 567799999999999999999987 99999999 88765 245899999998743338999999976321
Q ss_pred hh------cchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCCCCce
Q 014247 190 ML------LYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPS 263 (428)
Q Consensus 190 ~l------~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 263 (428)
.. ....+...++.++.+.| |||.+++.... ......+.++++++||+...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~-----------------------~~~~~~l~~~l~~~gf~~~~ 145 (170)
T 3q87_B 90 PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE-----------------------ANRPKEVLARLEERGYGTRI 145 (170)
T ss_dssp TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG-----------------------GGCHHHHHHHHHHTTCEEEE
T ss_pred cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec-----------------------CCCHHHHHHHHHHCCCcEEE
Confidence 11 01112345677777777 99999863210 01345677888899998655
Q ss_pred EE
Q 014247 264 VE 265 (428)
Q Consensus 264 ~~ 265 (428)
+.
T Consensus 146 ~~ 147 (170)
T 3q87_B 146 LK 147 (170)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 168
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.38 E-value=1.5e-12 Score=127.53 Aligned_cols=121 Identities=21% Similarity=0.130 Sum_probs=97.6
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC--CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc
Q 014247 97 TETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG--AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV 173 (428)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l 173 (428)
.+.+...+.......++.+|||+|||+|.++..++..+ ..+|+|+|++ .+++.|+++++..++. +++++++|+.++
T Consensus 188 ~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~ 266 (354)
T 3tma_A 188 TPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHL 266 (354)
T ss_dssp CHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhC
Confidence 35566777777777888999999999999999999964 3589999999 9999999999999987 799999999998
Q ss_pred cCC-CceeEEEEecchh-hhc----chhhHHHHHHHHhcccccCeEEEccC
Q 014247 174 EID-EEVDVIISEWMGY-MLL----YESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 174 ~~~-~~~DlVvs~~~~~-~l~----~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+.+ ..||+|++++... .+. .......+++.+.++|+|||.+++.+
T Consensus 267 ~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 267 PRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp GGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred ccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 764 6789999986311 111 12234788999999999999998643
No 169
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.38 E-value=1.2e-12 Score=121.01 Aligned_cols=102 Identities=21% Similarity=0.288 Sum_probs=85.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcC--CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-c-C----------
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAG--AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-E-I---------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g--~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~-~---------- 175 (428)
.++.+|||||||+|..+..+++.. ..+|+++|++ .+++.|++++...++.++++++.+|+.+. + .
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 567899999999999999999873 4599999999 99999999999988887899999998663 2 1
Q ss_pred -----C-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 176 -----D-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 176 -----~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
. ++||+|++.. .......+++.+.++|+|||++++..
T Consensus 139 ~~f~~~~~~fD~I~~~~------~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDA------DKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECS------CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeC------CHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 2 6899999853 23446788999999999999999754
No 170
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.38 E-value=6.4e-13 Score=129.23 Aligned_cols=109 Identities=22% Similarity=0.302 Sum_probs=83.9
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CC-CeEEEEeCh-HHHHHHHHHHHHC-------C---CCCcEEEEEc
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GA-KRVYAVDAS-DIAVQANEVVKAN-------N---LTDKVIVLHG 168 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~-~~V~giD~s-~~~~~a~~~~~~~-------~---~~~~v~~~~~ 168 (428)
..+...+...++.+|||+|||+|.++..+++. |. .+|+|+|++ .+++.|++++... + +..+++++.+
T Consensus 95 ~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 95 NMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 33444556688999999999999999999997 54 699999999 9999999988752 2 2357999999
Q ss_pred cccccc--CC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 169 RVEDVE--ID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 169 d~~~l~--~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
|+.+.. ++ ++||+|+++.. .+..++..+.++|+|||.+++..
T Consensus 175 d~~~~~~~~~~~~fD~V~~~~~--------~~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 175 DISGATEDIKSLTFDAVALDML--------NPHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp CTTCCC-------EEEEEECSS--------STTTTHHHHGGGEEEEEEEEEEE
T ss_pred ChHHcccccCCCCeeEEEECCC--------CHHHHHHHHHHhcCCCcEEEEEe
Confidence 998863 33 68999998541 12337888999999999998543
No 171
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.38 E-value=2.2e-12 Score=118.08 Aligned_cols=101 Identities=20% Similarity=0.362 Sum_probs=81.2
Q ss_pred CCCCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc----CCCceeE
Q 014247 109 SFIEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE----IDEEVDV 181 (428)
Q Consensus 109 ~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~----~~~~~Dl 181 (428)
...++.+|||+|||+|.++..+++. | ..+|+|+|++ .+++.++++++.+ .+++++++|+.+.. .+++||+
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~ 146 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVDV 146 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCceE
Confidence 3567899999999999999999986 4 3699999999 8999888887654 46999999998732 3468999
Q ss_pred EEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 182 IISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
|+++.. .......++.++.++|+|||.+++.
T Consensus 147 v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 147 IFEDVA-----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEECCC-----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCC-----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 998652 2233445599999999999999864
No 172
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.38 E-value=1.3e-12 Score=123.44 Aligned_cols=113 Identities=14% Similarity=0.103 Sum_probs=90.4
Q ss_pred cCCCCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----CCce
Q 014247 108 QSFIEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-----DEEV 179 (428)
Q Consensus 108 ~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-----~~~~ 179 (428)
+...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++..++. +++++++|+.++.. .++|
T Consensus 79 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 79 LNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp HCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhccccC
Confidence 34578899999999999999999984 44699999999 9999999999999886 59999999988754 5789
Q ss_pred eEEEEecchhhhc---------------chhhHHHHHHHHhcccccCeEEEccCCee
Q 014247 180 DVIISEWMGYMLL---------------YESMLGSVITARDRWLKRGGLILPSYATL 221 (428)
Q Consensus 180 DlVvs~~~~~~l~---------------~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 221 (428)
|+|+++...+.+. .......+++.+.++|||||+++.+++++
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 9999974221111 11335788999999999999999766543
No 173
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.38 E-value=1.7e-12 Score=119.86 Aligned_cols=103 Identities=13% Similarity=0.152 Sum_probs=86.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-c-C------CCce
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-E-I------DEEV 179 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~-~------~~~~ 179 (428)
.++++|||||||+|..+..+++. + ..+|+++|++ .+++.|+++++..++.++++++.+|+.+. + + .++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 56789999999999999999986 2 4599999999 99999999999999988899999998764 1 1 4789
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
|+|++.. .......+++.+.++|+|||++++...
T Consensus 149 D~I~~d~------~~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 149 DFGFVDA------DKPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEEECS------CGGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CEEEECC------chHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9999854 233467889999999999999997654
No 174
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=1.5e-12 Score=122.90 Aligned_cols=100 Identities=28% Similarity=0.331 Sum_probs=85.5
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecc
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWM 187 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~ 187 (428)
..++.+|||+|||+|.++..+|+. +..+|+|+|++ .+++.|+++++.+++.+ +.++++|+.+++..++||+|+++..
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~-~~~~~~d~~~~~~~~~~D~Vi~d~p 195 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNN-VIPILADNRDVELKDVADRVIMGYV 195 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSS-EEEEESCGGGCCCTTCEEEEEECCC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEECChHHcCccCCceEEEECCc
Confidence 467899999999999999999997 45699999999 99999999999999875 8899999998833478999998763
Q ss_pred hhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 188 GYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 188 ~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
. ....++..+.+.|+|||+++++
T Consensus 196 ~-------~~~~~l~~~~~~LkpgG~l~~s 218 (272)
T 3a27_A 196 H-------KTHKFLDKTFEFLKDRGVIHYH 218 (272)
T ss_dssp S-------SGGGGHHHHHHHEEEEEEEEEE
T ss_pred c-------cHHHHHHHHHHHcCCCCEEEEE
Confidence 2 3556788888999999999864
No 175
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.37 E-value=2.5e-12 Score=119.71 Aligned_cols=107 Identities=23% Similarity=0.305 Sum_probs=89.3
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHC-CCCCcEEEEEcccccccCC-
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKAN-NLTDKVIVLHGRVEDVEID- 176 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~-~~~~~v~~~~~d~~~l~~~- 176 (428)
..+...+...++.+|||+|||+|.++..+++. + ..+|+++|++ .+++.|++++..+ + .++++++++|+.+.+++
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCCT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCCC
Confidence 45555666788999999999999999999997 4 4599999999 9999999998887 6 45699999999987554
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
++||+|+++. .++..+++.+.++|+|||.+++.
T Consensus 165 ~~~D~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~~ 197 (258)
T 2pwy_A 165 AAYDGVALDL--------MEPWKVLEKAALALKPDRFLVAY 197 (258)
T ss_dssp TCEEEEEEES--------SCGGGGHHHHHHHEEEEEEEEEE
T ss_pred CCcCEEEECC--------cCHHHHHHHHHHhCCCCCEEEEE
Confidence 7899999853 23457788999999999999864
No 176
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=2.9e-12 Score=116.07 Aligned_cols=109 Identities=19% Similarity=0.159 Sum_probs=86.0
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-C-CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-A-KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI- 175 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~-~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~- 175 (428)
....+.+.+...++.+|||||||+|.++..+++.+ . .+|+++|++ .+++.|++++...++.+ ++++.+|+.....
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~ 143 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDN-VIVIVGDGTLGYEP 143 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEESCGGGCCGG
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEECCcccCCCC
Confidence 34455556666788999999999999999999874 2 599999999 99999999988877765 9999999865332
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
.++||+|++.. .+.+.. +.+.++|+|||++++..
T Consensus 144 ~~~fD~v~~~~---~~~~~~------~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 144 LAPYDRIYTTA---AGPKIP------EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp GCCEEEEEESS---BBSSCC------HHHHHTEEEEEEEEEEE
T ss_pred CCCeeEEEECC---chHHHH------HHHHHHcCCCcEEEEEE
Confidence 47899999865 333322 46788999999998653
No 177
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.37 E-value=1.9e-12 Score=122.28 Aligned_cols=109 Identities=21% Similarity=0.267 Sum_probs=90.8
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCc
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEE 178 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 178 (428)
..+...+...++.+|||+|||+|.++..+++. + ..+|+++|++ .+++.|++++..+++.++++++.+|+.+....++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 181 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKD 181 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCS
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCc
Confidence 34555666788999999999999999999987 4 4699999999 9999999999998886779999999988733478
Q ss_pred eeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 179 VDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
||+|+++. .++..++..+.++|+|||.+++..
T Consensus 182 ~D~V~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 182 VDALFLDV--------PDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp EEEEEECC--------SCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEECC--------cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 99999853 234577888999999999998643
No 178
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.36 E-value=2.9e-12 Score=118.61 Aligned_cols=107 Identities=18% Similarity=0.172 Sum_probs=89.9
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc-CCCcee
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE-IDEEVD 180 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~-~~~~~D 180 (428)
.+...+...++.+|||+|||+|.++..+++. ..+|+++|++ .+++.|+++...+++..+++++.+|+.+.. ..++||
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 160 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFH 160 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBS
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCccc
Confidence 4555566678899999999999999999998 5599999999 999999999998888777999999998865 447899
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+|+++. .++..+++.+.++|+|||.+++..
T Consensus 161 ~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 161 AAFVDV--------REPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp EEEECS--------SCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred EEEECC--------cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 999853 134567888899999999998643
No 179
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.36 E-value=2.2e-12 Score=128.28 Aligned_cols=108 Identities=22% Similarity=0.228 Sum_probs=90.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCC-CCcEEEEEcccccccC-----CCceeEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNL-TDKVIVLHGRVEDVEI-----DEEVDVII 183 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~-~~~v~~~~~d~~~l~~-----~~~~DlVv 183 (428)
.++.+|||+|||+|.+++.+++.|+++|+|+|++ .+++.|++++..+++ .++++++++|+.++.. ..+||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 5788999999999999999999888899999999 999999999999998 6579999999987532 36899999
Q ss_pred Eecchh------hhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 184 SEWMGY------MLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 184 s~~~~~------~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+++..+ ..........++..+.++|+|||+++++.
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 986321 11222457788999999999999998754
No 180
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.36 E-value=2.2e-12 Score=123.67 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=95.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHH---CCCCCcEEEEEccccccc---CCCceeEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKA---NNLTDKVIVLHGRVEDVE---IDEEVDVI 182 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~---~~~~~~v~~~~~d~~~l~---~~~~~DlV 182 (428)
.++.+|||||||+|.++..+++. +..+|+++|++ .+++.|++++.. .....+++++.+|+.++. .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 56789999999999999999987 45699999999 999999987632 222357999999998764 24789999
Q ss_pred EEecchhhhcchhhH--HHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCCC
Q 014247 183 ISEWMGYMLLYESML--GSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAFE 260 (428)
Q Consensus 183 vs~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 260 (428)
+++....... ...+ ..+++.+.++|+|||++++..... |.. ......+.+.++++||.
T Consensus 174 i~d~~~~~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~-----------------~~~--~~~~~~~~~~l~~~GF~ 233 (304)
T 3bwc_A 174 IIDTTDPAGP-ASKLFGEAFYKDVLRILKPDGICCNQGESI-----------------WLD--LELIEKMSRFIRETGFA 233 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEEECCT-----------------TTC--HHHHHHHHHHHHHHTCS
T ss_pred EECCCCcccc-chhhhHHHHHHHHHHhcCCCcEEEEecCCc-----------------ccc--hHHHHHHHHHHHhCCCC
Confidence 9976322111 1111 688999999999999998753211 000 01234567778888998
Q ss_pred CceEE
Q 014247 261 EPSVE 265 (428)
Q Consensus 261 ~~~~~ 265 (428)
.+...
T Consensus 234 ~v~~~ 238 (304)
T 3bwc_A 234 SVQYA 238 (304)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 65543
No 181
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.36 E-value=1.7e-12 Score=122.61 Aligned_cols=107 Identities=18% Similarity=0.223 Sum_probs=85.2
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHC-CCCCcEEEEEcccccccCCCc
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKAN-NLTDKVIVLHGRVEDVEIDEE 178 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~-~~~~~v~~~~~d~~~l~~~~~ 178 (428)
.+...+...++.+|||+|||+|.++..+++. +..+|+++|++ .+++.|++++..+ +. ++++++++|+.+...+++
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~~ 179 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFISDQM 179 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCCSCC
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCcCCC
Confidence 4555566678899999999999999999986 24599999999 9999999999887 75 459999999988433478
Q ss_pred eeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 179 VDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
||+|++.. .++..+++++.++|+|||++++..
T Consensus 180 fD~Vi~~~--------~~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 180 YDAVIADI--------PDPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp EEEEEECC--------SCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEEcC--------cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 99999843 235678899999999999998754
No 182
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.35 E-value=1.7e-12 Score=129.18 Aligned_cols=109 Identities=25% Similarity=0.259 Sum_probs=90.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----CCceeEEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-----DEEVDVIIS 184 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-----~~~~DlVvs 184 (428)
.++.+|||+|||+|.++..+++.|+++|+|+|++ .+++.|++++..+++.++++++++|+.++.. .++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 3788999999999999999999888899999999 9999999999999987679999999887532 468999999
Q ss_pred ecchh------hhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 185 EWMGY------MLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 185 ~~~~~------~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
++..+ ..........++..+.++|+|||.+++.+.
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 76321 122224577889999999999999886543
No 183
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.35 E-value=1.9e-12 Score=126.30 Aligned_cols=115 Identities=23% Similarity=0.197 Sum_probs=91.0
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCC-CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGA-KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE 177 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~-~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~ 177 (428)
..+.+.+.+...++.+|||+|||+|.++..+++.+. .+|+++|+| .+++.|++++..+++. ++++.+|+.+.. ++
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~-~~ 260 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV-KG 260 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC-CS
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc-cC
Confidence 344555655445677999999999999999999864 389999999 9999999999988875 567888987654 57
Q ss_pred ceeEEEEecchhhh--cchhhHHHHHHHHhcccccCeEEEcc
Q 014247 178 EVDVIISEWMGYML--LYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 178 ~~DlVvs~~~~~~l--~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+||+|+++...+.. ........+++++.++|+|||.+++.
T Consensus 261 ~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 261 RFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp CEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 99999998632211 12345789999999999999999864
No 184
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.35 E-value=3.9e-12 Score=134.96 Aligned_cols=108 Identities=20% Similarity=0.222 Sum_probs=91.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCC-CcEEEEEcccccc-c-CCCceeEEEEec
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLT-DKVIVLHGRVEDV-E-IDEEVDVIISEW 186 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~-~~v~~~~~d~~~l-~-~~~~~DlVvs~~ 186 (428)
.++++|||+|||+|.+++.+++.|+.+|+++|+| .+++.|+++++.|++. ++++++++|+.++ + ..++||+|++++
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 4789999999999999999999989889999999 9999999999999997 5799999999874 2 237899999987
Q ss_pred chh--------hhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 187 MGY--------MLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 187 ~~~--------~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
..+ .+....+...++..+.++|+|||+++++.
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 422 22334567888999999999999999654
No 185
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.35 E-value=2.9e-12 Score=117.21 Aligned_cols=103 Identities=16% Similarity=0.141 Sum_probs=86.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--C--C---Ccee
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--I--D---EEVD 180 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~--~---~~~D 180 (428)
.++.+|||||||+|..+..+++. + ..+|+++|++ .+++.|++++..+++.++++++++|+.+.. + . ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 56789999999999999999986 2 4599999999 999999999999998888999999986541 1 1 6899
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
+|++... ......+++.+.++|+|||++++...
T Consensus 148 ~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDAD------KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSC------STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCC------HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9998641 33467789999999999999997653
No 186
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.34 E-value=3.9e-12 Score=120.09 Aligned_cols=110 Identities=25% Similarity=0.337 Sum_probs=90.1
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHC-C-CCCcEEEEEcccccccC
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKAN-N-LTDKVIVLHGRVEDVEI 175 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~-~-~~~~v~~~~~d~~~l~~ 175 (428)
...+...+...++.+|||+|||+|.++..+++. + ..+|+++|++ .+++.|++++..+ + +.++++++++|+.+.++
T Consensus 88 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 88 AAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC
T ss_pred HHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC
Confidence 345555666788999999999999999999985 3 4599999999 9999999998876 4 45579999999998765
Q ss_pred C-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 176 D-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 176 ~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+ ++||+|+++. .++..++..+.++|+|||.+++..
T Consensus 168 ~~~~~D~v~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 168 PDGSVDRAVLDM--------LAPWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp CTTCEEEEEEES--------SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCceeEEEECC--------cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 3 7899999853 134577889999999999998643
No 187
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.34 E-value=3.8e-12 Score=122.61 Aligned_cols=114 Identities=18% Similarity=0.197 Sum_probs=89.6
Q ss_pred hccCCCCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-CCceeE
Q 014247 106 QNQSFIEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-DEEVDV 181 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-~~~~Dl 181 (428)
..+...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++.+++.+ ++++++|+.+++. +++||+
T Consensus 112 ~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~-v~~~~~D~~~~~~~~~~fD~ 190 (315)
T 1ixk_A 112 VALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLN-VILFHSSSLHIGELNVEFDK 190 (315)
T ss_dssp HHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCS-EEEESSCGGGGGGGCCCEEE
T ss_pred HHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCe-EEEEECChhhcccccccCCE
Confidence 3445678899999999999999999986 23589999999 99999999999988864 9999999988754 478999
Q ss_pred EEEecchhh---hcchh----------------hHHHHHHHHhcccccCeEEEccCCe
Q 014247 182 IISEWMGYM---LLYES----------------MLGSVITARDRWLKRGGLILPSYAT 220 (428)
Q Consensus 182 Vvs~~~~~~---l~~~~----------------~~~~~l~~~~~~LkpgG~lv~~~~~ 220 (428)
|+++...+. +.... ....+++.+.++|||||++++++++
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 999643111 11111 1258899999999999999976554
No 188
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.34 E-value=2.2e-12 Score=118.65 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=85.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc----cC-C--Ccee
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV----EI-D--EEVD 180 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l----~~-~--~~~D 180 (428)
.++.+|||||||+|..+..+++. + ..+|+++|++ .+++.|++++...++.++++++.+|+.+. +. . ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 46789999999999999999986 2 3499999999 99999999999888887899999997652 22 1 6899
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
+|++... ......+++.+.++|+|||++++...
T Consensus 151 ~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 151 LIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 9998641 24567889999999999999997654
No 189
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.33 E-value=4.2e-12 Score=117.13 Aligned_cols=107 Identities=11% Similarity=0.206 Sum_probs=79.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHH------CCCCCcEEEEEccccc-cc--C-CCc
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKA------NNLTDKVIVLHGRVED-VE--I-DEE 178 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~------~~~~~~v~~~~~d~~~-l~--~-~~~ 178 (428)
.++.+|||||||+|.++..+|+. +...|+|||++ .|++.|++++.. .++. ++.++++|+.+ ++ + +++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~-nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQ-NIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCT-TEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCC-eEEEEECcHHHhhhhhCCCcC
Confidence 45679999999999999999987 34589999999 999999887654 3443 59999999987 54 3 478
Q ss_pred eeEEEEecchhhhc--chh---hHHHHHHHHhcccccCeEEEccC
Q 014247 179 VDVIISEWMGYMLL--YES---MLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 179 ~DlVvs~~~~~~l~--~~~---~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
||.|++........ +.. ....+++++.++|||||.+++.+
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 99998743110000 000 01478999999999999998753
No 190
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.33 E-value=1.4e-12 Score=123.28 Aligned_cols=107 Identities=22% Similarity=0.258 Sum_probs=76.7
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEE-EcccccccC-
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVL-HGRVEDVEI- 175 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~-~~d~~~l~~- 175 (428)
.+.+++.......++.+|||||||||.++..+++.|+.+|+|+|++ .|++.+.+. + .++... ..++..+..
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~---~---~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ---D---DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT---C---TTEEEECSCCGGGCCGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C---cccceecccCceecchh
Confidence 3445555443345788999999999999999999988899999999 998875432 1 234333 335544432
Q ss_pred --C-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 --D-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 --~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+ ..||+|+++. .+. .+..++.++.++|+|||.+++.
T Consensus 146 ~l~~~~fD~v~~d~---sf~---sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 146 DFTEGLPSFASIDV---SFI---SLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GCTTCCCSEEEECC---SSS---CGGGTHHHHHHHSCTTCEEEEE
T ss_pred hCCCCCCCEEEEEe---eHh---hHHHHHHHHHHHcCcCCEEEEE
Confidence 3 3499999865 222 2478899999999999998863
No 191
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.33 E-value=4.9e-12 Score=119.05 Aligned_cols=125 Identities=15% Similarity=0.153 Sum_probs=88.3
Q ss_pred ccChhhHHHHHHHHHhccCCCCCCEEEEEcCCCcH----HHHHHHHc-C----CCeEEEEeCh-HHHHHHHHHHHH----
Q 014247 91 IKDRVRTETYRAAIMQNQSFIEGKVVVDVGCGTGI----LSIFCAQA-G----AKRVYAVDAS-DIAVQANEVVKA---- 156 (428)
Q Consensus 91 ~~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g----~~~V~giD~s-~~~~~a~~~~~~---- 156 (428)
.+|+...+.+.+.+... .++.+|||+|||||. +++.+++. + ..+|+|+|+| .+++.|++.+..
T Consensus 87 fRd~~~f~~l~~~llp~---~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~ 163 (274)
T 1af7_A 87 FREAHHFPILAEHARRR---HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSEL 163 (274)
T ss_dssp TTTTTHHHHHHHHHHHS---CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGG
T ss_pred cCChHHHHHHHHHccCC---CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhh
Confidence 44445555555554433 245799999999998 67777765 3 1289999999 999999875310
Q ss_pred -------------------CC-------CCCcEEEEEcccccccC--CCceeEEEEecchhhhcchhhHHHHHHHHhccc
Q 014247 157 -------------------NN-------LTDKVIVLHGRVEDVEI--DEEVDVIISEWMGYMLLYESMLGSVITARDRWL 208 (428)
Q Consensus 157 -------------------~~-------~~~~v~~~~~d~~~l~~--~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~L 208 (428)
.+ +..+|.|.++|+.+.++ .++||+|+|..+...+ .......+++.+.+.|
T Consensus 164 ~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L 242 (274)
T 1af7_A 164 KTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLL 242 (274)
T ss_dssp TTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGE
T ss_pred hcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHh
Confidence 00 11369999999988544 3789999997632222 2334689999999999
Q ss_pred ccCeEEEccCC
Q 014247 209 KRGGLILPSYA 219 (428)
Q Consensus 209 kpgG~lv~~~~ 219 (428)
+|||.+++...
T Consensus 243 ~pgG~L~lg~s 253 (274)
T 1af7_A 243 KPDGLLFAGHS 253 (274)
T ss_dssp EEEEEEEECTT
T ss_pred CCCcEEEEEec
Confidence 99999997543
No 192
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.33 E-value=5.4e-12 Score=116.19 Aligned_cols=109 Identities=18% Similarity=0.224 Sum_probs=84.0
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-ccCCC
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-VEIDE 177 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-l~~~~ 177 (428)
....+.+.+...++.+|||||||+|.++..+++.+..+|+++|++ .+++.|++++...++.+ ++++.+|+.. ++...
T Consensus 79 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~ 157 (235)
T 1jg1_A 79 MVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKN-VHVILGDGSKGFPPKA 157 (235)
T ss_dssp HHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCGGGC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEECCcccCCCCCC
Confidence 344455555667889999999999999999999742689999999 99999999999888865 9999999732 22224
Q ss_pred ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 178 EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+||+|++.. .+.+.. ..+.+.|+|||++++..
T Consensus 158 ~fD~Ii~~~---~~~~~~------~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 158 PYDVIIVTA---GAPKIP------EPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp CEEEEEECS---BBSSCC------HHHHHTEEEEEEEEEEE
T ss_pred CccEEEECC---cHHHHH------HHHHHhcCCCcEEEEEE
Confidence 699999865 332222 36778999999998754
No 193
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.32 E-value=5.9e-12 Score=114.99 Aligned_cols=100 Identities=24% Similarity=0.295 Sum_probs=80.2
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHc-CC-CeEEEEeCh-HHHHHHHHHHHHCCC----CCcEEEEEcccccccC-CCceeE
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQA-GA-KRVYAVDAS-DIAVQANEVVKANNL----TDKVIVLHGRVEDVEI-DEEVDV 181 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~-g~-~~V~giD~s-~~~~~a~~~~~~~~~----~~~v~~~~~d~~~l~~-~~~~Dl 181 (428)
..++.+|||||||+|.++..+++. +. .+|+++|++ .+++.|++++..+++ .++++++.+|+..... .++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 467899999999999999999987 43 499999999 999999999887654 3469999999886543 378999
Q ss_pred EEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 182 IISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
|++... +. .+++.+.++|||||++++..
T Consensus 155 i~~~~~---~~------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 155 IHVGAA---AP------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEECSB---BS------SCCHHHHHTEEEEEEEEEEE
T ss_pred EEECCc---hH------HHHHHHHHhcCCCcEEEEEE
Confidence 998652 21 22357789999999998753
No 194
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.31 E-value=2.5e-13 Score=127.44 Aligned_cols=110 Identities=18% Similarity=0.213 Sum_probs=75.5
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHHHHHHH-HHCCCCCcEEEE--EcccccccCCCce
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQANEVV-KANNLTDKVIVL--HGRVEDVEIDEEV 179 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~a~~~~-~~~~~~~~v~~~--~~d~~~l~~~~~~ 179 (428)
.+.+.....++.+|||||||+|.++..+++. .+|+|||+++|+..+++.. .......++.++ ++|+.+++ +++|
T Consensus 65 ~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~f 141 (265)
T 2oxt_A 65 WMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP-VERT 141 (265)
T ss_dssp HHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-CCCC
T ss_pred HHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC-CCCC
Confidence 3333334467899999999999999999998 5899999997532221110 000111158999 99999876 5789
Q ss_pred eEEEEecchhhhcc-hhhHH---HHHHHHhcccccCe--EEEc
Q 014247 180 DVIISEWMGYMLLY-ESMLG---SVITARDRWLKRGG--LILP 216 (428)
Q Consensus 180 DlVvs~~~~~~l~~-~~~~~---~~l~~~~~~LkpgG--~lv~ 216 (428)
|+|+|+.. +.... ..+.. .++..+.++|+||| .+++
T Consensus 142 D~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 142 DVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred cEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 99999764 22211 11111 37888999999999 8886
No 195
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.31 E-value=5.8e-12 Score=124.21 Aligned_cols=151 Identities=15% Similarity=0.091 Sum_probs=103.5
Q ss_pred HHHHhccC-CCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCce
Q 014247 102 AAIMQNQS-FIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEV 179 (428)
Q Consensus 102 ~~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 179 (428)
..+...+. ..++.+|||||||+|.++..+++.+ ..+++++|+..+++.|++ . .+++++.+|+.+ +.+. |
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~------~-~~v~~~~~d~~~-~~~~-~ 268 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPP------L-SGIEHVGGDMFA-SVPQ-G 268 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC------C-TTEEEEECCTTT-CCCC-E
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhh------c-CCCEEEeCCccc-CCCC-C
Confidence 34444443 4567899999999999999999874 347889999767665543 1 359999999987 5555 9
Q ss_pred eEEEEecchhhhcchhhHH--HHHHHHhcccccCeEEEccCCeeeEeecCCccc----hhhhhhhh----hccCCCCcch
Q 014247 180 DVIISEWMGYMLLYESMLG--SVITARDRWLKRGGLILPSYATLYMAPVTHPDR----YSESIDFW----RNVYGIDMSA 249 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~--~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~~~~~~ 249 (428)
|+|++.. ++++..+.. .+++++.++|+|||++++..... +-..... .......+ ......+..+
T Consensus 269 D~v~~~~---~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e 342 (372)
T 1fp1_D 269 DAMILKA---VCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFIL---PEEPNTSEESKLVSTLDNLMFITVGGRERTEKQ 342 (372)
T ss_dssp EEEEEES---SGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE---CSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHH
T ss_pred CEEEEec---ccccCCHHHHHHHHHHHHHhcCCCCEEEEEEecc---CCCCccchHHHHHHHhhHHHHhccCCccCCHHH
Confidence 9999866 566555555 99999999999999998765322 1111100 11111111 1122345778
Q ss_pred hHHHHHhcCCCCceEEee
Q 014247 250 MMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 250 l~~~l~~~Gf~~~~~~~~ 267 (428)
+..+++++||+...+...
T Consensus 343 ~~~ll~~aGf~~~~~~~~ 360 (372)
T 1fp1_D 343 YEKLSKLSGFSKFQVACR 360 (372)
T ss_dssp HHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHCCCceEEEEEc
Confidence 999999999998776653
No 196
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.31 E-value=1.3e-11 Score=110.95 Aligned_cols=100 Identities=26% Similarity=0.201 Sum_probs=80.5
Q ss_pred CCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecc
Q 014247 109 SFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWM 187 (428)
Q Consensus 109 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~ 187 (428)
...++.+|||+|||+|.++..+++.|..+|+|+|++ .+++.|++++..+++ +++++++|+.+++ .+||+|++++.
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~D~v~~~~p 121 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN--SRVDIVIMNPP 121 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC--CCCSEEEECCC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC--CCCCEEEEcCC
Confidence 345788999999999999999999887789999999 999999999888877 5999999999875 68999999874
Q ss_pred hhhhcchhhHHHHHHHHhcccccCeEEE
Q 014247 188 GYMLLYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 188 ~~~l~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
.+... ......+++.+.++| |+.++
T Consensus 122 ~~~~~-~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 122 FGSQR-KHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp CSSSS-TTTTHHHHHHHHHHC--SEEEE
T ss_pred Ccccc-CCchHHHHHHHHHhc--CcEEE
Confidence 22222 233456778888877 66544
No 197
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.31 E-value=1.2e-11 Score=121.77 Aligned_cols=154 Identities=18% Similarity=0.153 Sum_probs=101.8
Q ss_pred HHHhccC-CCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCcee
Q 014247 103 AIMQNQS-FIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVD 180 (428)
Q Consensus 103 ~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~D 180 (428)
.+...+. ..+..+|||||||+|.++..+++. ...+++++|+..+++.|++. .+++++.+|+.+ +.+.. |
T Consensus 193 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-------~~v~~~~~d~~~-~~p~~-D 263 (368)
T 3reo_A 193 KILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAF-------SGVEHLGGDMFD-GVPKG-D 263 (368)
T ss_dssp HHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCC-------TTEEEEECCTTT-CCCCC-S
T ss_pred HHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhc-------CCCEEEecCCCC-CCCCC-C
Confidence 3444443 456789999999999999999986 33489999997666555431 469999999987 55544 9
Q ss_pred EEEEecchhhhcchh--hHHHHHHHHhcccccCeEEEccCCeeeEeecCCcc-chhhhhhh--h---hccCCCCcchhHH
Q 014247 181 VIISEWMGYMLLYES--MLGSVITARDRWLKRGGLILPSYATLYMAPVTHPD-RYSESIDF--W---RNVYGIDMSAMMP 252 (428)
Q Consensus 181 lVvs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~-~~~~~~~~--~---~~~~~~~~~~l~~ 252 (428)
+|++.. ++++.. +...+|+++++.|+|||++++........+..... ........ . .........++..
T Consensus 264 ~v~~~~---vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ 340 (368)
T 3reo_A 264 AIFIKW---ICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQA 340 (368)
T ss_dssp EEEEES---CGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHH
T ss_pred EEEEec---hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHH
Confidence 999876 454333 35688999999999999998765432110000000 00000111 1 1222345778999
Q ss_pred HHHhcCCCCceEEeec
Q 014247 253 LAKQCAFEEPSVETIT 268 (428)
Q Consensus 253 ~l~~~Gf~~~~~~~~~ 268 (428)
+++++||+.+.+....
T Consensus 341 ll~~AGF~~v~~~~~~ 356 (368)
T 3reo_A 341 LAMASGFRGFKVASCA 356 (368)
T ss_dssp HHHHTTCCEEEEEEEE
T ss_pred HHHHCCCeeeEEEEeC
Confidence 9999999988766553
No 198
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.30 E-value=2.8e-12 Score=116.19 Aligned_cols=109 Identities=23% Similarity=0.243 Sum_probs=85.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-CceeEEEEecch
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEVDVIISEWMG 188 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~~~ 188 (428)
.++.+|||||||+|.++..++ .+|+|+|++ . ++.++++|+.+++++ ++||+|++..
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~-- 123 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCL-- 123 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEES--
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEeh--
Confidence 567899999999999988773 489999999 5 367889999987764 7899999865
Q ss_pred hhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCCCCceE
Q 014247 189 YMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAFEEPSV 264 (428)
Q Consensus 189 ~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 264 (428)
.+++ .++..+++++.++|+|||.+++..... ...+...+..+++++||+....
T Consensus 124 -~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~---------------------~~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 124 -SLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS---------------------RFEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp -CCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG---------------------GCSCHHHHHHHHHHTTEEEEEE
T ss_pred -hccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC---------------------CCCCHHHHHHHHHHCCCEEEEE
Confidence 4443 678999999999999999998753210 0125678889999999986553
No 199
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.30 E-value=1.4e-11 Score=120.50 Aligned_cols=158 Identities=14% Similarity=0.139 Sum_probs=107.3
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCcee
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVD 180 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~D 180 (428)
..+.......+..+|||||||+|.++..++++ ..-+++..|..++++.|++.+...+ .++|+++.+|+.+.+. ..+|
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~-~~~D 246 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL-PEAD 246 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC---CCSEEEEESCTTTSCC-CCCS
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcc-cCceeeecCccccCCC-CCce
Confidence 34445555566789999999999999999987 3337888888888888888765443 5789999999987544 4689
Q ss_pred EEEEecchhhhcchhh--HHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhh--hhhhhccCC--CCcchhHHHH
Q 014247 181 VIISEWMGYMLLYESM--LGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSES--IDFWRNVYG--IDMSAMMPLA 254 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~--~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~l~~~l 254 (428)
+|++.. ++++..+ ...+|+++++.|+|||++++....+. +-......... ...+....| ....+|..++
T Consensus 247 ~~~~~~---vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~--~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll 321 (353)
T 4a6d_A 247 LYILAR---VLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD--EDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLL 321 (353)
T ss_dssp EEEEES---SGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC--TTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred EEEeee---ecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC--CCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHH
Confidence 999866 5555443 46789999999999999887543211 00001111111 111111122 3567899999
Q ss_pred HhcCCCCceEEe
Q 014247 255 KQCAFEEPSVET 266 (428)
Q Consensus 255 ~~~Gf~~~~~~~ 266 (428)
+++||+.+.+..
T Consensus 322 ~~AGf~~v~v~~ 333 (353)
T 4a6d_A 322 SSAGFRDFQFKK 333 (353)
T ss_dssp HHHTCEEEEEEC
T ss_pred HHCCCceEEEEE
Confidence 999998776543
No 200
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.30 E-value=1.5e-11 Score=116.12 Aligned_cols=103 Identities=21% Similarity=0.227 Sum_probs=80.9
Q ss_pred CCCCEEEEEcCCC---cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc-----------
Q 014247 111 IEGKVVVDVGCGT---GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE----------- 174 (428)
Q Consensus 111 ~~~~~VLDiGcGt---G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~----------- 174 (428)
....+|||||||+ |.++..+++. ...+|+++|+| .|++.|++++.. .++++++++|+.+..
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhcc
Confidence 3457999999999 9888777664 23499999999 999999988743 246999999997531
Q ss_pred CC-CceeEEEEecchhhhcchh--hHHHHHHHHhcccccCeEEEccCC
Q 014247 175 ID-EEVDVIISEWMGYMLLYES--MLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 175 ~~-~~~DlVvs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
++ .+||+|++.. ++++.. ++..+++++.++|+|||.|++...
T Consensus 153 ~d~~~~d~v~~~~---vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 153 IDFSRPAAIMLVG---MLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CCTTSCCEEEETT---TGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCCCEEEEEec---hhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 22 5899999876 444433 489999999999999999997653
No 201
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.30 E-value=4.8e-13 Score=126.23 Aligned_cols=110 Identities=20% Similarity=0.229 Sum_probs=76.0
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHHHHHHH-HHCCCCCcEEEE--EcccccccCCCce
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQANEVV-KANNLTDKVIVL--HGRVEDVEIDEEV 179 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~a~~~~-~~~~~~~~v~~~--~~d~~~l~~~~~~ 179 (428)
.+.+.....++.+|||||||+|.++..+++. .+|+|+|+++|+..+++.. .......++.++ ++|+.+++ +++|
T Consensus 73 ~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~f 149 (276)
T 2wa2_A 73 WIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME-PFQA 149 (276)
T ss_dssp HHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-CCCC
T ss_pred HHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-CCCc
Confidence 3334333467899999999999999999998 5899999997533222110 001111258999 99999876 5789
Q ss_pred eEEEEecchhhhcc-hhhHH---HHHHHHhcccccCe--EEEc
Q 014247 180 DVIISEWMGYMLLY-ESMLG---SVITARDRWLKRGG--LILP 216 (428)
Q Consensus 180 DlVvs~~~~~~l~~-~~~~~---~~l~~~~~~LkpgG--~lv~ 216 (428)
|+|+|+.. +.... ..+.. .++..+.++|+||| .+++
T Consensus 150 D~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 150 DTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 99999764 22211 11111 37888999999999 8886
No 202
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.30 E-value=9.8e-12 Score=123.03 Aligned_cols=105 Identities=18% Similarity=0.156 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--CCCceeEEEEecc
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--IDEEVDVIISEWM 187 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~~~~~DlVvs~~~ 187 (428)
.++.+|||+|||+|.+++.+++.|+. |+++|+| .+++.|+++++.|++.. .+.++|+.++. ..+.||+|++++.
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred cCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHhcCCCCEEEECCC
Confidence 35899999999999999999999885 9999999 99999999999999875 45689988752 2345999999763
Q ss_pred hhh------hcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 188 GYM------LLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 188 ~~~------l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
.+. .........++..+.++|+|||.++..+
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s 326 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSS 326 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 211 1112346788889999999999998544
No 203
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.30 E-value=9.1e-12 Score=121.07 Aligned_cols=96 Identities=26% Similarity=0.349 Sum_probs=83.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.++.+|||+|||+|.+++. ++ ++.+|+|+|+| .+++.|+++++.+++.++++++++|+.++. ++||+|++++..+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPKF 269 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTTT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcHh
Confidence 5789999999999999999 88 67799999999 999999999999999778999999999876 7899999975322
Q ss_pred hhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 190 MLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 190 ~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...++..+.++|+|||.+++.
T Consensus 270 -------~~~~l~~~~~~L~~gG~l~~~ 290 (336)
T 2yx1_A 270 -------AHKFIDKALDIVEEGGVIHYY 290 (336)
T ss_dssp -------GGGGHHHHHHHEEEEEEEEEE
T ss_pred -------HHHHHHHHHHHcCCCCEEEEE
Confidence 126777888999999998864
No 204
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.30 E-value=6.8e-13 Score=122.11 Aligned_cols=148 Identities=18% Similarity=0.219 Sum_probs=87.7
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEE-ccccccc---
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLH-GRVEDVE--- 174 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~-~d~~~l~--- 174 (428)
+.+++.......++++|||||||+|.++..+++.|+.+|+|+|+| .|++.|+++.. ++.... .++..+.
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~~ 98 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLAD 98 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGGG
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHhH
Confidence 445555544345678999999999999999999987799999999 99988765422 122211 1222111
Q ss_pred CCC-ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhh--hhh--hccCCCCcch
Q 014247 175 IDE-EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESI--DFW--RNVYGIDMSA 249 (428)
Q Consensus 175 ~~~-~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~ 249 (428)
++. .+|.+.+.. .+.. +..++.++.++|||||.+++... |.. ...+.... ... ...+......
T Consensus 99 ~~~~~~d~~~~D~---v~~~---l~~~l~~i~rvLkpgG~lv~~~~-----p~~-e~~~~~~~~~G~~~d~~~~~~~~~~ 166 (232)
T 3opn_A 99 FEQGRPSFTSIDV---SFIS---LDLILPPLYEILEKNGEVAALIK-----PQF-EAGREQVGKNGIIRDPKVHQMTIEK 166 (232)
T ss_dssp CCSCCCSEEEECC---SSSC---GGGTHHHHHHHSCTTCEEEEEEC-----HHH-HSCHHHHC-CCCCCCHHHHHHHHHH
T ss_pred cCcCCCCEEEEEE---Ehhh---HHHHHHHHHHhccCCCEEEEEEC-----ccc-ccCHHHhCcCCeecCcchhHHHHHH
Confidence 112 255555443 1111 26789999999999999886311 100 00000000 000 0011124567
Q ss_pred hHHHHHhcCCCCceEE
Q 014247 250 MMPLAKQCAFEEPSVE 265 (428)
Q Consensus 250 l~~~l~~~Gf~~~~~~ 265 (428)
+..+++++||+...+.
T Consensus 167 l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 167 VLKTATQLGFSVKGLT 182 (232)
T ss_dssp HHHHHHHHTEEEEEEE
T ss_pred HHHHHHHCCCEEEEEE
Confidence 8889999999865544
No 205
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.30 E-value=7.8e-12 Score=114.28 Aligned_cols=100 Identities=19% Similarity=0.202 Sum_probs=80.6
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcCC------CeEEEEeCh-HHHHHHHHHHHHCCC----CCcEEEEEccccccc----
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAGA------KRVYAVDAS-DIAVQANEVVKANNL----TDKVIVLHGRVEDVE---- 174 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g~------~~V~giD~s-~~~~~a~~~~~~~~~----~~~v~~~~~d~~~l~---- 174 (428)
..++.+|||||||+|.++..+++... .+|+++|++ .+++.|++++...++ .++++++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 46789999999999999999998732 499999999 999999999888773 346999999998753
Q ss_pred C-CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 175 I-DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 175 ~-~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
. .++||+|++.. .+.+ +++.+.++|+|||++++..
T Consensus 158 ~~~~~fD~I~~~~---~~~~------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 158 KELGLFDAIHVGA---SASE------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HHHCCEEEEEECS---BBSS------CCHHHHHHEEEEEEEEEEE
T ss_pred ccCCCcCEEEECC---chHH------HHHHHHHhcCCCcEEEEEE
Confidence 2 37899999865 2222 3467788999999998653
No 206
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.29 E-value=1.7e-11 Score=120.88 Aligned_cols=117 Identities=16% Similarity=0.184 Sum_probs=90.1
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCC-CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc
Q 014247 97 TETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGA-KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE 174 (428)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~-~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~ 174 (428)
.+.+...+.... ..++.+|||+|||+|.++..++..+. .+|+|+|++ .+++.|++++..+++.++++++++|+.+++
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 344555555555 67889999999999999999999854 389999999 999999999999999778999999999987
Q ss_pred CC-CceeEEEEecchh-hhcc----hhhHHHHHHHHhcccccCeEEE
Q 014247 175 ID-EEVDVIISEWMGY-MLLY----ESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 175 ~~-~~~DlVvs~~~~~-~l~~----~~~~~~~l~~~~~~LkpgG~lv 215 (428)
.+ ++||+|++++... .+.. ......+++.+.++| +|+.++
T Consensus 282 ~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~ 327 (373)
T 3tm4_A 282 QYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVF 327 (373)
T ss_dssp GTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEE
T ss_pred cccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEE
Confidence 65 7899999986311 1111 122367888888888 333333
No 207
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.29 E-value=1e-11 Score=115.22 Aligned_cols=106 Identities=15% Similarity=0.253 Sum_probs=80.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCC-CeEEEEeCh-HHHHHHHHHHHHC--------CCCCcEEEEEccccc-cc--C-C
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGA-KRVYAVDAS-DIAVQANEVVKAN--------NLTDKVIVLHGRVED-VE--I-D 176 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~-~~V~giD~s-~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~-l~--~-~ 176 (428)
.++.+|||||||+|.++..+++.+. .+|+|+|+| .+++.|++++..+ ++. ++.++++|+.+ ++ + .
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHhccc
Confidence 5678999999999999999999864 389999999 9999999988775 664 59999999987 44 3 3
Q ss_pred CceeEEEEecchhhhcc-----hhhHHHHHHHHhcccccCeEEEcc
Q 014247 177 EEVDVIISEWMGYMLLY-----ESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~-----~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+.+|.|+.......... ......++..+.++|+|||.+++.
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 78999986421100000 000157899999999999999873
No 208
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.28 E-value=5.2e-12 Score=119.69 Aligned_cols=106 Identities=17% Similarity=0.138 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHC--CC--------CCcEEEEEccccccc-CCCc
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKAN--NL--------TDKVIVLHGRVEDVE-IDEE 178 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~--~~--------~~~v~~~~~d~~~l~-~~~~ 178 (428)
.++.+|||||||+|.++..+++.+..+|+++|++ .+++.|++++ .. ++ ..+++++.+|+.+.. .+++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 4568999999999999999998876799999999 9999999887 33 22 457999999986631 1578
Q ss_pred eeEEEEecchhhhcchh-hHHHHHHHHhcccccCeEEEcc
Q 014247 179 VDVIISEWMGYMLLYES-MLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~-~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
||+|+++.......... ....+++.+.++|+|||++++.
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 99999976321111011 1367899999999999999875
No 209
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.27 E-value=6.4e-12 Score=124.36 Aligned_cols=106 Identities=24% Similarity=0.253 Sum_probs=88.2
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----CCceeEEEEe
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-----DEEVDVIISE 185 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-----~~~~DlVvs~ 185 (428)
++.+|||+|||+|.++..+++. +.+|+|+|++ .+++.|++++..|++.+ ++++++|+.++.. ..+||+|+++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 7789999999999999999998 6699999999 99999999999999976 9999999987532 4689999997
Q ss_pred cchhh------hcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 186 WMGYM------LLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 186 ~~~~~------l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
+..+. .........++..+.++|+|||.++++..
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 63211 11224567889999999999999987543
No 210
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.27 E-value=5.8e-12 Score=121.54 Aligned_cols=107 Identities=17% Similarity=0.129 Sum_probs=82.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHH--CCC-CCcEEEEEccccccc--CCCceeEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKA--NNL-TDKVIVLHGRVEDVE--IDEEVDVII 183 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~l~--~~~~~DlVv 183 (428)
.++.+|||||||+|.++..+++. +..+|+++|++ .+++.|++++.. +++ ..+++++.+|+.+.. .+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 45689999999999999999987 56699999999 999999998764 233 357999999987642 247899999
Q ss_pred EecchhhhcchhhH-HHHHHHHhcccccCeEEEcc
Q 014247 184 SEWMGYMLLYESML-GSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 184 s~~~~~~l~~~~~~-~~~l~~~~~~LkpgG~lv~~ 217 (428)
++............ ..+++.+.++|+|||++++.
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 97632111111111 78899999999999999874
No 211
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.27 E-value=2.4e-11 Score=119.44 Aligned_cols=152 Identities=17% Similarity=0.158 Sum_probs=102.1
Q ss_pred HHhccC-CCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeE
Q 014247 104 IMQNQS-FIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDV 181 (428)
Q Consensus 104 i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~Dl 181 (428)
+...+. ..+..+|||||||+|.++..+++. ...+++++|+..+++.|++ ..+++++.+|+.+ +.+.. |+
T Consensus 192 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~D~~~-~~p~~-D~ 262 (364)
T 3p9c_A 192 LLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQ-------FPGVTHVGGDMFK-EVPSG-DT 262 (364)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC-------CTTEEEEECCTTT-CCCCC-SE
T ss_pred HHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhh-------cCCeEEEeCCcCC-CCCCC-CE
Confidence 444443 556789999999999999999886 3348999999877665543 1469999999987 55544 99
Q ss_pred EEEecchhhhcch--hhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchh--hhhh--hh---hccCCCCcchhHH
Q 014247 182 IISEWMGYMLLYE--SMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYS--ESID--FW---RNVYGIDMSAMMP 252 (428)
Q Consensus 182 Vvs~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~--~~~~--~~---~~~~~~~~~~l~~ 252 (428)
|++.. ++++. .+...+|+++++.|+|||++++........+.. ..... .... .+ ......+..+|..
T Consensus 263 v~~~~---vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~-~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ 338 (364)
T 3p9c_A 263 ILMKW---ILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEA-NPSSQGVFHVDMIMLAHNPGGRERYEREFQA 338 (364)
T ss_dssp EEEES---CGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCS-SHHHHHHHHHHHHHHHHCSSCCCCBHHHHHH
T ss_pred EEehH---HhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCc-chhhhhHHHhHHHHHhcccCCccCCHHHHHH
Confidence 99866 55543 446789999999999999998765432110000 00000 0011 11 1112234678999
Q ss_pred HHHhcCCCCceEEeec
Q 014247 253 LAKQCAFEEPSVETIT 268 (428)
Q Consensus 253 ~l~~~Gf~~~~~~~~~ 268 (428)
+++++||+.+.+....
T Consensus 339 ll~~AGF~~v~~~~~~ 354 (364)
T 3p9c_A 339 LARGAGFTGVKSTYIY 354 (364)
T ss_dssp HHHHTTCCEEEEEEEE
T ss_pred HHHHCCCceEEEEEcC
Confidence 9999999988776553
No 212
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.27 E-value=7.3e-12 Score=130.23 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=79.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc--cC-CCceeEEEEec
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV--EI-DEEVDVIISEW 186 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l--~~-~~~~DlVvs~~ 186 (428)
.++.+|||||||.|.++..+|+.|+ +|+|||++ .+++.|+..+.+++.. +|++.+++++++ .. +++||+|+|..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccCCCccEEEECc
Confidence 4568999999999999999999998 89999999 9999999998887754 499999999987 22 47899999965
Q ss_pred chhhhcchhhHHHH--HHHHhcccccCeEEE
Q 014247 187 MGYMLLYESMLGSV--ITARDRWLKRGGLIL 215 (428)
Q Consensus 187 ~~~~l~~~~~~~~~--l~~~~~~LkpgG~lv 215 (428)
+++|..++..+ +.++.+.|+++|..+
T Consensus 143 ---~~ehv~~~~~~~~~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 143 ---VFHHIVHLHGIDEVKRLLSRLADVTQAV 170 (569)
T ss_dssp ---CHHHHHHHHCHHHHHHHHHHHHHHSSEE
T ss_pred ---chhcCCCHHHHHHHHHHHHHhcccccee
Confidence 55555554433 334556677777544
No 213
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.26 E-value=1.5e-11 Score=117.03 Aligned_cols=107 Identities=16% Similarity=0.203 Sum_probs=80.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCC---C-CCcEEEEEcccccccC--CCceeEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANN---L-TDKVIVLHGRVEDVEI--DEEVDVI 182 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~---~-~~~v~~~~~d~~~l~~--~~~~DlV 182 (428)
.++++|||||||+|.++..+++. +..+|+++|++ .+++.|++++...+ + ..+++++.+|+.+... .++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45689999999999999999997 56799999999 99999999876542 2 3479999999877532 3789999
Q ss_pred EEecchhhhcchhhH--HHHHHHHhcccccCeEEEccC
Q 014247 183 ISEWMGYMLLYESML--GSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 183 vs~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+++....... ...+ ..+++.+.++|+|||++++..
T Consensus 162 i~D~~~p~~~-~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGP-GESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCccCc-chhccHHHHHHHHHHhcCCCCEEEEec
Confidence 9976322111 1112 778999999999999999653
No 214
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.25 E-value=1.1e-11 Score=118.17 Aligned_cols=108 Identities=15% Similarity=0.091 Sum_probs=81.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHH--CCC-CCcEEEEEcccccc-cC-CCceeEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKA--NNL-TDKVIVLHGRVEDV-EI-DEEVDVII 183 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~l-~~-~~~~DlVv 183 (428)
..+.+|||||||+|.++..+++. +..+|+++|++ .+++.|++++.. +++ ..+++++.+|+.+. +. +++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45689999999999999999987 56799999999 999999988754 333 35799999998763 22 47899999
Q ss_pred Eecchhhhcchh--hHHHHHHHHhcccccCeEEEccC
Q 014247 184 SEWMGYMLLYES--MLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 184 s~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++.......... ....+++.+.++|+|||++++..
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 875321011000 13688999999999999999754
No 215
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.25 E-value=3.8e-11 Score=113.92 Aligned_cols=86 Identities=20% Similarity=0.326 Sum_probs=73.1
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE 177 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~ 177 (428)
...+.|.+.+...++.+|||||||+|.++..+++.+. +|+|+|++ .+++.+++++..++..++++++++|+.+++++
T Consensus 15 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~- 92 (285)
T 1zq9_A 15 LIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP- 92 (285)
T ss_dssp HHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC-
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch-
Confidence 3455566666667889999999999999999999865 99999999 99999999887766656799999999987665
Q ss_pred ceeEEEEec
Q 014247 178 EVDVIISEW 186 (428)
Q Consensus 178 ~~DlVvs~~ 186 (428)
.||+|+++.
T Consensus 93 ~fD~vv~nl 101 (285)
T 1zq9_A 93 FFDTCVANL 101 (285)
T ss_dssp CCSEEEEEC
T ss_pred hhcEEEEec
Confidence 799999976
No 216
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.25 E-value=2.7e-11 Score=117.33 Aligned_cols=108 Identities=13% Similarity=0.123 Sum_probs=83.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHC--CC-CCcEEEEEcccccc-c-C-CCceeEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKAN--NL-TDKVIVLHGRVEDV-E-I-DEEVDVI 182 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~l-~-~-~~~~DlV 182 (428)
.++.+|||||||+|.++..+++. +..+|+++|++ .+++.|++++... ++ ..+++++.+|+.+. + . .++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 46689999999999999999987 45699999999 9999999987642 34 35799999998774 2 2 3789999
Q ss_pred EEecchhhhcch-hhHHHHHHHHhcccccCeEEEccC
Q 014247 183 ISEWMGYMLLYE-SMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 183 vs~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+++......... .....+++.+.++|+|||++++..
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 997532111111 114788999999999999999753
No 217
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.25 E-value=1.4e-11 Score=117.88 Aligned_cols=108 Identities=17% Similarity=0.136 Sum_probs=81.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHH--CCC-CCcEEEEEcccccc-c-CCCceeEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKA--NNL-TDKVIVLHGRVEDV-E-IDEEVDVII 183 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~l-~-~~~~~DlVv 183 (428)
.++++|||||||+|.++..+++. +..+|+++|++ .+++.|++++.. +++ ..+++++.+|+.+. + .+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 46789999999999999999987 45699999999 999999998765 344 46799999998763 2 247899999
Q ss_pred Eecchhhhcch-hhHHHHHHHHhcccccCeEEEccC
Q 014247 184 SEWMGYMLLYE-SMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 184 s~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++......... .....+++.+.++|+|||++++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 97632211100 123578999999999999999753
No 218
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.25 E-value=1.6e-11 Score=112.33 Aligned_cols=100 Identities=15% Similarity=0.229 Sum_probs=78.2
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHc-CC------CeEEEEeCh-HHHHHHHHHHHHCCC----CCcEEEEEcccccccCC-
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQA-GA------KRVYAVDAS-DIAVQANEVVKANNL----TDKVIVLHGRVEDVEID- 176 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~-g~------~~V~giD~s-~~~~~a~~~~~~~~~----~~~v~~~~~d~~~l~~~- 176 (428)
..++.+|||||||+|.++..+++. +. .+|+++|++ .+++.|++++...++ ..+++++.+|+.+....
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 467889999999999999999885 42 489999999 999999998876551 23599999998873222
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++||+|++.. .+.+ +.+++.+.|||||++++..
T Consensus 162 ~~fD~I~~~~---~~~~------~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 162 APYNAIHVGA---AAPD------TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp CSEEEEEECS---CBSS------CCHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECC---chHH------HHHHHHHHhcCCCEEEEEE
Confidence 7899999865 2222 2267788999999998653
No 219
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.25 E-value=1.3e-11 Score=124.14 Aligned_cols=113 Identities=14% Similarity=0.110 Sum_probs=89.6
Q ss_pred ccCCCCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--CCCceeE
Q 014247 107 NQSFIEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--IDEEVDV 181 (428)
Q Consensus 107 ~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~~~~~Dl 181 (428)
.+...++.+|||+|||+|..+..+|+. +..+|+|+|++ .+++.++++++..++. +.++++|+.++. .+++||+
T Consensus 96 ~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~FD~ 173 (464)
T 3m6w_A 96 LLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTYFHR 173 (464)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSCEEE
T ss_pred hcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccccCCE
Confidence 344578999999999999999999976 33589999999 9999999999999986 899999998875 3588999
Q ss_pred EEEecchh--h-hcchh----------------hHHHHHHHHhcccccCeEEEccCCee
Q 014247 182 IISEWMGY--M-LLYES----------------MLGSVITARDRWLKRGGLILPSYATL 221 (428)
Q Consensus 182 Vvs~~~~~--~-l~~~~----------------~~~~~l~~~~~~LkpgG~lv~~~~~~ 221 (428)
|+++.... . +.... ....+++.+.++|||||+|+.+++++
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 99754211 1 11111 12778999999999999999876654
No 220
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.24 E-value=5e-12 Score=116.66 Aligned_cols=97 Identities=11% Similarity=0.110 Sum_probs=76.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-----CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc---cC-C-Cce
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-----GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV---EI-D-EEV 179 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-----g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l---~~-~-~~~ 179 (428)
.++.+|||||||+|..+..+++. ...+|+|||++ .+++.|+ ++..+++++++|+.+. +. . .+|
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~l~~~~~~~f 153 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTTFEHLREMAH 153 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGGGGGGSSSCS
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHHHHHhhccCCC
Confidence 35679999999999999999986 23599999999 8887776 2235799999999884 32 2 379
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhc-ccccCeEEEccCC
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDR-WLKRGGLILPSYA 219 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~-~LkpgG~lv~~~~ 219 (428)
|+|++... +. +...++.++.+ +|||||++++...
T Consensus 154 D~I~~d~~-----~~-~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 154 PLIFIDNA-----HA-NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SEEEEESS-----CS-SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CEEEECCc-----hH-hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 99998642 22 57788999997 9999999997653
No 221
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.24 E-value=4.5e-12 Score=121.36 Aligned_cols=102 Identities=21% Similarity=0.260 Sum_probs=71.3
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeC----h-HHHHHHHHHHHHCCCCCcEEEEEc-ccccccCCCceeEEE
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDA----S-DIAVQANEVVKANNLTDKVIVLHG-RVEDVEIDEEVDVII 183 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~----s-~~~~~a~~~~~~~~~~~~v~~~~~-d~~~l~~~~~~DlVv 183 (428)
..++.+|||||||+|.++..+++. .+|+|+|+ + .+++.+. ....+ .+++.++++ |+.+++ +++||+|+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~-~~~fD~V~ 153 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP-PERCDTLL 153 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC-CCCCSEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC-cCCCCEEE
Confidence 456889999999999999999998 47999999 4 4332110 01111 146999999 888775 36899999
Q ss_pred EecchhhhcchhhHH---HHHHHHhcccccCeEEEcc
Q 014247 184 SEWMGYMLLYESMLG---SVITARDRWLKRGGLILPS 217 (428)
Q Consensus 184 s~~~~~~l~~~~~~~---~~l~~~~~~LkpgG~lv~~ 217 (428)
|+...+...+..+.. .+|..+.++|||||.+++.
T Consensus 154 sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 154 CDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp ECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 976332111221111 4788888999999988863
No 222
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.23 E-value=2e-11 Score=122.69 Aligned_cols=114 Identities=17% Similarity=0.141 Sum_probs=90.1
Q ss_pred ccCCCCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--CCCceeE
Q 014247 107 NQSFIEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--IDEEVDV 181 (428)
Q Consensus 107 ~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~~~~~Dl 181 (428)
.+...++.+|||+|||+|..+..+|+. +..+|+|+|++ .+++.++++++..++.+ +.++++|+.++. .+++||+
T Consensus 100 ~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~n-v~v~~~Da~~l~~~~~~~FD~ 178 (456)
T 3m4x_A 100 AAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSN-AIVTNHAPAELVPHFSGFFDR 178 (456)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSS-EEEECCCHHHHHHHHTTCEEE
T ss_pred HcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEeCCHHHhhhhccccCCE
Confidence 344578999999999999999999876 34599999999 99999999999999874 999999998864 3578999
Q ss_pred EEEecchh---hhcch----------------hhHHHHHHHHhcccccCeEEEccCCee
Q 014247 182 IISEWMGY---MLLYE----------------SMLGSVITARDRWLKRGGLILPSYATL 221 (428)
Q Consensus 182 Vvs~~~~~---~l~~~----------------~~~~~~l~~~~~~LkpgG~lv~~~~~~ 221 (428)
|+++...+ .+... .....+|..+.++|||||+|+.+++++
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 99865311 11111 112378999999999999999876654
No 223
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.23 E-value=1.8e-11 Score=115.51 Aligned_cols=108 Identities=16% Similarity=0.100 Sum_probs=83.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHH--CCC-CCcEEEEEcccccc-c-CCCceeEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKA--NNL-TDKVIVLHGRVEDV-E-IDEEVDVII 183 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~l-~-~~~~~DlVv 183 (428)
..+++|||||||+|.++..+++. +..+|+++|++ .+++.|++++.. +++ .++++++.+|+.+. . ..++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35689999999999999999987 67799999999 999999987754 234 45799999998763 2 247899999
Q ss_pred Eecchhhhcch-hhHHHHHHHHhcccccCeEEEccC
Q 014247 184 SEWMGYMLLYE-SMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 184 s~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++......... .....+++.+.++|+|||++++..
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 97632111100 013678999999999999999754
No 224
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.23 E-value=3e-11 Score=119.12 Aligned_cols=98 Identities=14% Similarity=0.144 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCC-CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-ccC--CCceeEEEEe
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGA-KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-VEI--DEEVDVIISE 185 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~-~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-l~~--~~~~DlVvs~ 185 (428)
.++.+|||+| |+|.++..+++.+. .+|+|+|++ .+++.|+++++.+++. +++++++|+.+ ++. .++||+|+++
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEEC
Confidence 4688999999 99999999998875 699999999 9999999999998887 69999999988 653 3689999998
Q ss_pred cchhhhcchhhHHHHHHHHhcccccCeEE
Q 014247 186 WMGYMLLYESMLGSVITARDRWLKRGGLI 214 (428)
Q Consensus 186 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 214 (428)
... .... ...+++.+.++|+|||++
T Consensus 249 ~p~---~~~~-~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 249 PPE---TLEA-IRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp CCS---SHHH-HHHHHHHHHHTBCSTTCE
T ss_pred CCC---chHH-HHHHHHHHHHHcccCCeE
Confidence 632 1122 588999999999999943
No 225
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.23 E-value=2.6e-11 Score=118.58 Aligned_cols=141 Identities=12% Similarity=0.126 Sum_probs=97.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.++.+|||||||+|.++..+++. +..+++++|+..+++.|++ . .+++++.+|+.+ +.+. ||+|++..
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~-~~v~~~~~d~~~-~~p~-~D~v~~~~--- 254 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSG------S-NNLTYVGGDMFT-SIPN-ADAVLLKY--- 254 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC------B-TTEEEEECCTTT-CCCC-CSEEEEES---
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhccc------C-CCcEEEeccccC-CCCC-ccEEEeeh---
Confidence 46689999999999999999987 2348999999767665543 1 249999999976 4444 99999876
Q ss_pred hhcchhhHH--HHHHHHhccccc---CeEEEccCCeeeEeecCCcc----chhhhhhh--h-hccCCCCcchhHHHHHhc
Q 014247 190 MLLYESMLG--SVITARDRWLKR---GGLILPSYATLYMAPVTHPD----RYSESIDF--W-RNVYGIDMSAMMPLAKQC 257 (428)
Q Consensus 190 ~l~~~~~~~--~~l~~~~~~Lkp---gG~lv~~~~~~~~~~~~~~~----~~~~~~~~--~-~~~~~~~~~~l~~~l~~~ 257 (428)
++++..+.. .+++++.++|+| ||++++...... -.... .......+ + ......+..++..+++++
T Consensus 255 ~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~---~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~a 331 (352)
T 1fp2_A 255 ILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID---KKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEA 331 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC---TTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHT
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC---CCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHC
Confidence 555555555 999999999999 999987654321 11100 00001111 0 011223567899999999
Q ss_pred CCCCceEEe
Q 014247 258 AFEEPSVET 266 (428)
Q Consensus 258 Gf~~~~~~~ 266 (428)
||+...+..
T Consensus 332 Gf~~~~~~~ 340 (352)
T 1fp2_A 332 GFQHYKISP 340 (352)
T ss_dssp TCCEEEEEE
T ss_pred CCCeeEEEe
Confidence 999876654
No 226
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.22 E-value=2.2e-11 Score=108.56 Aligned_cols=95 Identities=20% Similarity=0.350 Sum_probs=71.1
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccC--------C----C
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEI--------D----E 177 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--------~----~ 177 (428)
..++.+|||+|||+|.++..+++. ..+|+|+|++++. .. .+++++++|+.+... . +
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~----------~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME----------EI-AGVRFIRCDIFKETIFDDIDRALREEGIE 90 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC----------CC-TTCEEEECCTTSSSHHHHHHHHHHHHTCS
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc----------cC-CCeEEEEccccCHHHHHHHHHHhhcccCC
Confidence 467899999999999999999998 4599999999431 12 359999999987542 1 4
Q ss_pred ceeEEEEecchhhh--------cchhhHHHHHHHHhcccccCeEEEc
Q 014247 178 EVDVIISEWMGYML--------LYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 178 ~~DlVvs~~~~~~l--------~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
+||+|+|+...... ........+++.+.++|||||.+++
T Consensus 91 ~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~ 137 (191)
T 3dou_A 91 KVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLL 137 (191)
T ss_dssp SEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 89999997421111 0112246778888999999999985
No 227
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.22 E-value=1.1e-11 Score=119.11 Aligned_cols=108 Identities=19% Similarity=0.159 Sum_probs=80.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHC--CC-CCcEEEEEcccccc-c-CCCceeEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKAN--NL-TDKVIVLHGRVEDV-E-IDEEVDVII 183 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~l-~-~~~~~DlVv 183 (428)
.++++|||||||+|.++..+++. +..+|+++|++ .+++.|++++... ++ ..+++++.+|+.+. + .+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 45689999999999999999987 45699999999 9999999987543 33 45799999998763 2 247899999
Q ss_pred EecchhhhcchhhH-HHHHHHHhcccccCeEEEccC
Q 014247 184 SEWMGYMLLYESML-GSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 184 s~~~~~~l~~~~~~-~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++............ ..+++.+.++|+|||++++..
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 97632211111111 788999999999999999764
No 228
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.22 E-value=3.5e-11 Score=114.05 Aligned_cols=107 Identities=17% Similarity=0.113 Sum_probs=83.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCC--C-CCcEEEEEccccccc--CCCceeEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANN--L-TDKVIVLHGRVEDVE--IDEEVDVII 183 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~l~--~~~~~DlVv 183 (428)
.++++|||||||+|.++..+++. +..+|+++|++ .+++.|++++...+ + ..+++++.+|+.+.. .+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 46689999999999999999987 35699999999 99999998865432 2 357999999987742 247899999
Q ss_pred EecchhhhcchhhH--HHHHHHHhcccccCeEEEccC
Q 014247 184 SEWMGYMLLYESML--GSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 184 s~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lv~~~ 218 (428)
++....... ...+ ..+++.+.++|+|||++++..
T Consensus 157 ~d~~~~~~~-~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 157 VDSSDPIGP-AETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EECCCTTTG-GGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCc-chhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 975322211 1222 789999999999999999754
No 229
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.22 E-value=3.6e-11 Score=118.85 Aligned_cols=120 Identities=19% Similarity=0.242 Sum_probs=96.8
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCC---------------------------------------Ce
Q 014247 97 TETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGA---------------------------------------KR 137 (428)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~---------------------------------------~~ 137 (428)
.+.+..++.......++.+|||++||+|.++..+|..+. .+
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 455777888887778889999999999999999987642 36
Q ss_pred EEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecc-hhhhcchhhHHHHHHHHhccccc--CeE
Q 014247 138 VYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWM-GYMLLYESMLGSVITARDRWLKR--GGL 213 (428)
Q Consensus 138 V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~-~~~l~~~~~~~~~l~~~~~~Lkp--gG~ 213 (428)
|+|+|++ .+++.|++++..+++.+.+++.++|+.++..+.+||+|++++. +.-+.....+..+++.+.+.|++ |+.
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 339 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWS 339 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCE
Confidence 9999999 9999999999999998789999999999887789999999874 22222234567777777777776 666
Q ss_pred EEc
Q 014247 214 ILP 216 (428)
Q Consensus 214 lv~ 216 (428)
+++
T Consensus 340 ~~i 342 (385)
T 3ldu_A 340 YYL 342 (385)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 230
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.21 E-value=6e-11 Score=106.19 Aligned_cols=90 Identities=23% Similarity=0.167 Sum_probs=70.7
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecch
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMG 188 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~ 188 (428)
..++.+|||+|||+|.++..+++.|..+|+|+|++ .+++.|++++. +++++++|+.+++ ++||+|+++...
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~--~~~D~v~~~~p~ 120 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS--GKYDTWIMNPPF 120 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC--CCEEEEEECCCC
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC--CCeeEEEECCCc
Confidence 45788999999999999999999877789999999 99999988754 4899999999875 789999998743
Q ss_pred hhhcchhhHHHHHHHHhccc
Q 014247 189 YMLLYESMLGSVITARDRWL 208 (428)
Q Consensus 189 ~~l~~~~~~~~~l~~~~~~L 208 (428)
+.... .....+++++.+.|
T Consensus 121 ~~~~~-~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 121 GSVVK-HSDRAFIDKAFETS 139 (200)
T ss_dssp --------CHHHHHHHHHHE
T ss_pred hhccC-chhHHHHHHHHHhc
Confidence 33322 22346778888877
No 231
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.21 E-value=7.2e-11 Score=116.41 Aligned_cols=120 Identities=22% Similarity=0.228 Sum_probs=98.0
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCC---------------------------------------Ce
Q 014247 97 TETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGA---------------------------------------KR 137 (428)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~---------------------------------------~~ 137 (428)
.+.+..++.......++..|||.+||+|.++..+|..+. .+
T Consensus 179 ~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 179 KENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 356777787777778889999999999999999887533 25
Q ss_pred EEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecc-hhhhcchhhHHHHHHHHhccccc--CeE
Q 014247 138 VYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWM-GYMLLYESMLGSVITARDRWLKR--GGL 213 (428)
Q Consensus 138 V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~-~~~l~~~~~~~~~l~~~~~~Lkp--gG~ 213 (428)
|+|+|++ .+++.|++++..+++.+.++++++|+.+++.+.+||+|++++. +.-+.....+..+++.+.+.||+ ||.
T Consensus 259 v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~ 338 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWS 338 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcE
Confidence 9999999 9999999999999998889999999999887789999999873 33333445677777777777776 776
Q ss_pred EEc
Q 014247 214 ILP 216 (428)
Q Consensus 214 lv~ 216 (428)
+++
T Consensus 339 ~~i 341 (384)
T 3ldg_A 339 QFI 341 (384)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 232
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.21 E-value=2.1e-11 Score=106.09 Aligned_cols=104 Identities=22% Similarity=0.289 Sum_probs=76.0
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CC-CeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEccccccc------
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GA-KRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVE------ 174 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~-~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~------ 174 (428)
.+.......++.+|||+|||+|.++..+++. |. .+|+|+|+++++. . .+++++++|+.+.+
T Consensus 13 ~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~----------~-~~~~~~~~d~~~~~~~~~~~ 81 (180)
T 1ej0_A 13 IQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP----------I-VGVDFLQGDFRDELVMKALL 81 (180)
T ss_dssp HHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC----------C-TTEEEEESCTTSHHHHHHHH
T ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc----------c-CcEEEEEcccccchhhhhhh
Confidence 3333333567889999999999999999987 43 5999999996321 1 35999999998865
Q ss_pred --CC-CceeEEEEecchhhhcch--h------hHHHHHHHHhcccccCeEEEcc
Q 014247 175 --ID-EEVDVIISEWMGYMLLYE--S------MLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 --~~-~~~DlVvs~~~~~~l~~~--~------~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.+ ++||+|+++...+..... . ....+++.+.++|+|||.+++.
T Consensus 82 ~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 135 (180)
T 1ej0_A 82 ERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVK 135 (180)
T ss_dssp HHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 43 789999996532211111 1 1268899999999999999863
No 233
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.21 E-value=2.9e-11 Score=113.42 Aligned_cols=101 Identities=20% Similarity=0.285 Sum_probs=78.8
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID- 176 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~- 176 (428)
+.+.+...+. .++.+|||||||+|.++..+++. +..+|+|+|++ .+++.|+++. .++.++.+|+.+++++
T Consensus 74 ~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~ 146 (269)
T 1p91_A 74 IVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSD 146 (269)
T ss_dssp HHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCT
T ss_pred HHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCC
Confidence 3444444332 46789999999999999999997 23489999999 9998887753 2489999999888765
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
++||+|++... ..+++++.++|+|||.+++.
T Consensus 147 ~~fD~v~~~~~----------~~~l~~~~~~L~pgG~l~~~ 177 (269)
T 1p91_A 147 TSMDAIIRIYA----------PCKAEELARVVKPGGWVITA 177 (269)
T ss_dssp TCEEEEEEESC----------CCCHHHHHHHEEEEEEEEEE
T ss_pred CceeEEEEeCC----------hhhHHHHHHhcCCCcEEEEE
Confidence 78999998541 12478889999999999864
No 234
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.20 E-value=5.3e-11 Score=117.84 Aligned_cols=120 Identities=21% Similarity=0.214 Sum_probs=96.0
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCC---------------------------------------Ce
Q 014247 97 TETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGA---------------------------------------KR 137 (428)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~---------------------------------------~~ 137 (428)
.+.+..++.......++..|||.+||+|.++..+|..+. .+
T Consensus 186 ~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 186 KETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 456777888887778889999999999999999887633 25
Q ss_pred EEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecc-hhhhcchhhHHHHHHHHhccccc--CeE
Q 014247 138 VYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWM-GYMLLYESMLGSVITARDRWLKR--GGL 213 (428)
Q Consensus 138 V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~-~~~l~~~~~~~~~l~~~~~~Lkp--gG~ 213 (428)
|+|+|++ .+++.|++++..+++.++++++++|+.+++.+.+||+|++++. +.-+.....+..+++.+.+.|++ ||.
T Consensus 266 V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 345 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWS 345 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCE
Confidence 9999999 9999999999999998889999999999887789999999873 22222234466677777677765 776
Q ss_pred EEc
Q 014247 214 ILP 216 (428)
Q Consensus 214 lv~ 216 (428)
+++
T Consensus 346 ~~i 348 (393)
T 3k0b_A 346 VYV 348 (393)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 235
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.20 E-value=3.5e-11 Score=115.78 Aligned_cols=108 Identities=17% Similarity=0.159 Sum_probs=83.4
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHH--CC-C-CCcEEEEEcccccc-c-CCCceeEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKA--NN-L-TDKVIVLHGRVEDV-E-IDEEVDVI 182 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~--~~-~-~~~v~~~~~d~~~l-~-~~~~~DlV 182 (428)
.++++|||||||+|.++..+++. +..+|+++|++ .+++.|++++.. .+ + ..+++++.+|+.+. + .+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45689999999999999999987 45699999999 999999988754 22 2 45799999998874 2 24789999
Q ss_pred EEecchhh---hcchh-hHHHHHHHHhcccccCeEEEccC
Q 014247 183 ISEWMGYM---LLYES-MLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 183 vs~~~~~~---l~~~~-~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+++..... ..... ....+++.+.++|+|||++++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 99763221 00011 14788999999999999999753
No 236
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.20 E-value=5.5e-11 Score=120.57 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=86.9
Q ss_pred CCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--CCCceeEEEEec
Q 014247 112 EGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--IDEEVDVIISEW 186 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~~~~~DlVvs~~ 186 (428)
++.+|||+|||+|..+..+|+. +..+|+|+|++ .+++.++++++..++.+ +.++++|+.+++ .+++||+|+++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~n-v~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISN-VALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCS-EEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEeCCHHHhhhhccccCCEEEECC
Confidence 8899999999999999999986 23589999999 99999999999988864 999999998865 357899999864
Q ss_pred chh---hhcch----------------hhHHHHHHHHhcccccCeEEEccCCee
Q 014247 187 MGY---MLLYE----------------SMLGSVITARDRWLKRGGLILPSYATL 221 (428)
Q Consensus 187 ~~~---~l~~~----------------~~~~~~l~~~~~~LkpgG~lv~~~~~~ 221 (428)
..+ .+... .....+|..+.++|||||+|+.+++++
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 211 11111 113467899999999999999876543
No 237
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.19 E-value=1.4e-10 Score=105.46 Aligned_cols=99 Identities=17% Similarity=0.188 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.++.+|||||||+|.++..++ +..+|+|+|++ .+++.+++++..++. ...+..+|....+++++||+|++..+.+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCCCCcchHHHHHHHH
Confidence 567899999999999999887 56699999999 999999999888874 5789999999888889999999876556
Q ss_pred hhcchhhHHHHHHHHhcccccCeEEE
Q 014247 190 MLLYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 190 ~l~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
++.+.. ....+ ++...|+++|++|
T Consensus 180 ~LE~q~-~~~~~-~ll~aL~~~~vvV 203 (253)
T 3frh_A 180 LLEREQ-AGSAM-ALLQSLNTPRMAV 203 (253)
T ss_dssp HHHHHS-TTHHH-HHHHHCBCSEEEE
T ss_pred Hhhhhc-hhhHH-HHHHHhcCCCEEE
Confidence 665554 23333 6666899999887
No 238
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.19 E-value=4e-11 Score=114.53 Aligned_cols=104 Identities=17% Similarity=0.181 Sum_probs=80.0
Q ss_pred CEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--C-CCceeEEEEecch
Q 014247 114 KVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--I-DEEVDVIISEWMG 188 (428)
Q Consensus 114 ~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~-~~~~DlVvs~~~~ 188 (428)
.+|||||||+|.++..+++. ...+|++||++ .+++.|++++... ...+++++.+|+.++. . .++||+|+++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 49999999999999999994 33489999999 9999999886533 2357999999988752 2 3789999997532
Q ss_pred hhhcch-hhHHHHHHHHhcccccCeEEEccC
Q 014247 189 YMLLYE-SMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 189 ~~l~~~-~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
...... ....++++.++++|+|||++++..
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 211111 113688999999999999998643
No 239
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.18 E-value=1.2e-10 Score=117.53 Aligned_cols=114 Identities=18% Similarity=0.180 Sum_probs=89.3
Q ss_pred hccCCCCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--CC-Cce
Q 014247 106 QNQSFIEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--ID-EEV 179 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~~-~~~ 179 (428)
..+...++.+|||+|||+|..+..+++. +..+|+|+|++ .++..++++++..++.+ ++++++|+.+++ ++ ++|
T Consensus 253 ~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~f 331 (450)
T 2yxl_A 253 IVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKI-VKPLVKDARKAPEIIGEEVA 331 (450)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCS-EEEECSCTTCCSSSSCSSCE
T ss_pred HhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCc-EEEEEcChhhcchhhccCCC
Confidence 3445678899999999999999999985 22599999999 99999999999988864 999999998876 34 689
Q ss_pred eEEEEecchh---hhcchhh----------------HHHHHHHHhcccccCeEEEccCCe
Q 014247 180 DVIISEWMGY---MLLYESM----------------LGSVITARDRWLKRGGLILPSYAT 220 (428)
Q Consensus 180 DlVvs~~~~~---~l~~~~~----------------~~~~l~~~~~~LkpgG~lv~~~~~ 220 (428)
|+|+++...+ .+...++ ...++..+.++|||||+++..+++
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9999854211 1111111 157899999999999999976554
No 240
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.18 E-value=4.5e-11 Score=116.76 Aligned_cols=106 Identities=16% Similarity=0.197 Sum_probs=79.2
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCC------CcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCG------TGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG 168 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcG------tG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~ 168 (428)
..|.+.+.... .++.+||||||| +|..++.+++. ...+|+|+|+| .|. . ...+++++++
T Consensus 204 ~~Ye~lL~~l~--~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~--~~~rI~fv~G 271 (419)
T 3sso_A 204 PHYDRHFRDYR--NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V--DELRIRTIQG 271 (419)
T ss_dssp HHHHHHHGGGT--TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G--CBTTEEEEEC
T ss_pred HHHHHHHHhhc--CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h--cCCCcEEEEe
Confidence 44555444432 457899999999 77777666654 34599999999 762 1 2346999999
Q ss_pred ccccccCC-------CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 169 RVEDVEID-------EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 169 d~~~l~~~-------~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
|+.++++. ++||+|+++. .++..+...+++++.++|||||++++.+.
T Consensus 272 Da~dlpf~~~l~~~d~sFDlVisdg----sH~~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 272 DQNDAEFLDRIARRYGPFDIVIDDG----SHINAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp CTTCHHHHHHHHHHHCCEEEEEECS----CCCHHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred cccccchhhhhhcccCCccEEEECC----cccchhHHHHHHHHHHhcCCCeEEEEEec
Confidence 99987543 7899999864 23456688999999999999999997653
No 241
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.17 E-value=5.6e-11 Score=116.44 Aligned_cols=142 Identities=14% Similarity=0.142 Sum_probs=98.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.++.+|||||||+|.++..+++.. ..+++++|++.+++.|++ . .+++++.+|+.+ +.+ .||+|++..
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~-~~v~~~~~d~~~-~~~-~~D~v~~~~--- 259 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG------N-ENLNFVGGDMFK-SIP-SADAVLLKW--- 259 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC------C-SSEEEEECCTTT-CCC-CCSEEEEES---
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc------C-CCcEEEeCccCC-CCC-CceEEEEcc---
Confidence 356899999999999999999873 338999999877665543 2 249999999987 555 599999876
Q ss_pred hhcchhhHH--HHHHHHhccccc---CeEEEccCCeeeEeecCCcc----chhhhhhh--h--hccCCCCcchhHHHHHh
Q 014247 190 MLLYESMLG--SVITARDRWLKR---GGLILPSYATLYMAPVTHPD----RYSESIDF--W--RNVYGIDMSAMMPLAKQ 256 (428)
Q Consensus 190 ~l~~~~~~~--~~l~~~~~~Lkp---gG~lv~~~~~~~~~~~~~~~----~~~~~~~~--~--~~~~~~~~~~l~~~l~~ 256 (428)
++++..+.. .+++++.+.|+| ||++++..... +-.... .......+ + ......+..++..++++
T Consensus 260 vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~---~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~ 336 (358)
T 1zg3_A 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI---DETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYD 336 (358)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE---CTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc---CCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHH
Confidence 555555544 999999999999 99998765432 111100 00111111 1 11122367889999999
Q ss_pred cCCCCceEEee
Q 014247 257 CAFEEPSVETI 267 (428)
Q Consensus 257 ~Gf~~~~~~~~ 267 (428)
+||+...+...
T Consensus 337 aGf~~~~~~~~ 347 (358)
T 1zg3_A 337 AGFSSYKITPI 347 (358)
T ss_dssp TTCCEEEEEEE
T ss_pred cCCCeeEEEec
Confidence 99998776553
No 242
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.17 E-value=1e-10 Score=111.74 Aligned_cols=85 Identities=16% Similarity=0.292 Sum_probs=67.4
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCc
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEE 178 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 178 (428)
+.+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|++ .+++.|++++..+++ ++++++++|+.+++. .+
T Consensus 30 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~-~~ 106 (299)
T 2h1r_A 30 ILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF-PK 106 (299)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC-CC
T ss_pred HHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc-cc
Confidence 344455555667889999999999999999999854 99999999 999999999887776 469999999988766 48
Q ss_pred eeEEEEecc
Q 014247 179 VDVIISEWM 187 (428)
Q Consensus 179 ~DlVvs~~~ 187 (428)
||+|+++..
T Consensus 107 ~D~Vv~n~p 115 (299)
T 2h1r_A 107 FDVCTANIP 115 (299)
T ss_dssp CSEEEEECC
T ss_pred CCEEEEcCC
Confidence 999999863
No 243
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.17 E-value=8.2e-11 Score=105.19 Aligned_cols=96 Identities=15% Similarity=0.307 Sum_probs=71.0
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHc-C--CCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEccccccc------------
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQA-G--AKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVE------------ 174 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~-g--~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~------------ 174 (428)
..++.+|||+|||+|.++..+++. + ..+|+|+|++++. .. .+++++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PI-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CC-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CC-CCceEEEccccchhhhhhcccccccc
Confidence 467889999999999999999986 3 3589999999531 12 35899999998765
Q ss_pred -------------CC-CceeEEEEecchhhhc-chhh-------HHHHHHHHhcccccCeEEEc
Q 014247 175 -------------ID-EEVDVIISEWMGYMLL-YESM-------LGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 175 -------------~~-~~~DlVvs~~~~~~l~-~~~~-------~~~~l~~~~~~LkpgG~lv~ 216 (428)
++ ++||+|+++...+... +..+ ...+++.+.++|+|||.+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 33 6899999975221110 0111 23478889999999999986
No 244
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.16 E-value=1.8e-11 Score=107.26 Aligned_cols=114 Identities=13% Similarity=0.085 Sum_probs=86.7
Q ss_pred CCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC----CCceeEEE
Q 014247 109 SFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----DEEVDVII 183 (428)
Q Consensus 109 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----~~~~DlVv 183 (428)
...+|.+|||||||. +++|+| .|++.|+++... +++++++|+.+++. +++||+|+
T Consensus 9 g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~~~~~~fD~V~ 68 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSAHKESSFDIIL 68 (176)
T ss_dssp TCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGCCCSSCEEEEE
T ss_pred CCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccccCCCCCEeEEE
Confidence 457899999999996 239999 999999887532 38999999999876 47899999
Q ss_pred Eecchhhhcch-hhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCcchhHHHHHhcCC
Q 014247 184 SEWMGYMLLYE-SMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDMSAMMPLAKQCAF 259 (428)
Q Consensus 184 s~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 259 (428)
+.. .+++. .++..++++++++|||||++++..+. .... ....+......+..+++++||
T Consensus 69 ~~~---~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~------~~~~--------~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 69 SGL---VPGSTTLHSAEILAEIARILRPGGCLFLKEPV------ETAV--------DNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp ECC---STTCCCCCCHHHHHHHHHHEEEEEEEEEEEEE------ESSS--------CSSSSSCCHHHHHHHHHHTTC
T ss_pred ECC---hhhhcccCHHHHHHHHHHHCCCCEEEEEEccc------cccc--------ccccccCCHHHHHHHHHHCCC
Confidence 865 55555 66899999999999999999984221 0000 001233467789999999999
No 245
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.15 E-value=2.3e-10 Score=114.46 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=83.7
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
+.+.+.+.+ ..++.+|||+|||+|.++..+|+.+ .+|+|+|++ .+++.|++++..+++. ++|+++|+.++..
T Consensus 279 e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~- 351 (425)
T 2jjq_A 279 VNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSV- 351 (425)
T ss_dssp HHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCC-
T ss_pred HHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCc-
Confidence 344444444 3677899999999999999999974 499999999 9999999999998885 9999999998754
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
.+||+|++++.-. .....+++.+. .|+|+|+++++.
T Consensus 352 ~~fD~Vv~dPPr~-----g~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 352 KGFDTVIVDPPRA-----GLHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp TTCSEEEECCCTT-----CSCHHHHHHHH-HHCCSEEEEEES
T ss_pred cCCCEEEEcCCcc-----chHHHHHHHHH-hcCCCcEEEEEC
Confidence 3899999976321 11234555554 489999998753
No 246
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.15 E-value=8.5e-11 Score=107.81 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=88.2
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI 175 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~ 175 (428)
+.+...+...+ .+..+|||||||+|.++..++.. +..+|+++|++ .+++.+++++..+++. .++...|...-++
T Consensus 120 D~fY~~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~p 195 (281)
T 3lcv_B 120 DEFYRELFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDRL 195 (281)
T ss_dssp HHHHHHHGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSCC
T ss_pred HHHHHHHHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccCC
Confidence 34445555554 44679999999999999999887 66699999999 9999999999999885 6888889887777
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEE
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
+++||++++..+.+++..+. ....+ ++...|+++|++|
T Consensus 196 ~~~~DvaL~lkti~~Le~q~-kg~g~-~ll~aL~~~~vvV 233 (281)
T 3lcv_B 196 DEPADVTLLLKTLPCLETQQ-RGSGW-EVIDIVNSPNIVV 233 (281)
T ss_dssp CSCCSEEEETTCHHHHHHHS-TTHHH-HHHHHSSCSEEEE
T ss_pred CCCcchHHHHHHHHHhhhhh-hHHHH-HHHHHhCCCCEEE
Confidence 79999999876544554333 22344 6788899999988
No 247
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.13 E-value=1.4e-10 Score=108.18 Aligned_cols=121 Identities=12% Similarity=0.110 Sum_probs=82.6
Q ss_pred HHHHHHHHHhccC-CCCCCEEEEEcCCC---cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccc
Q 014247 97 TETYRAAIMQNQS-FIEGKVVVDVGCGT---GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRV 170 (428)
Q Consensus 97 ~~~~~~~i~~~~~-~~~~~~VLDiGcGt---G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~ 170 (428)
++.|...+.+.+. ......|||||||+ |.+...+.+. ...+|+++|.| .|+..|++++...+ ..+++++++|+
T Consensus 62 nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~ 140 (277)
T 3giw_A 62 NRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADM 140 (277)
T ss_dssp HHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCT
T ss_pred HHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecc
Confidence 3455555555443 23346999999997 3344333332 34499999999 99999998876543 24699999999
Q ss_pred ccccC-------CCcee-----EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 171 EDVEI-------DEEVD-----VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 171 ~~l~~-------~~~~D-----lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
.++.. .+.|| .|+++.+.+++....++..+++++.+.|+|||.|+++.
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 88521 13354 56676644444333337889999999999999999764
No 248
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.12 E-value=3.7e-10 Score=113.45 Aligned_cols=113 Identities=17% Similarity=0.194 Sum_probs=87.2
Q ss_pred hHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-
Q 014247 96 RTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV- 173 (428)
Q Consensus 96 r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l- 173 (428)
.++.+.+.+.+.+...++.+|||+|||+|.++..+++. ..+|+|+|+| .+++.|++++..+++. +++|+++|+.+.
T Consensus 270 ~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l 347 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCC
T ss_pred HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHh
Confidence 35556666666666677889999999999999999998 5599999999 9999999999999887 699999999873
Q ss_pred ---cC-CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 174 ---EI-DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 174 ---~~-~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+. .++||+|++++.-..+ ..+++.+.+ ++|+++++++
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr~g~------~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPARAGA------AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp SSSGGGTTCCSEEEECCCTTCC------HHHHHHHHH-HCCSEEEEEE
T ss_pred hhhhhhcCCCCEEEECCCCccH------HHHHHHHHh-cCCCeEEEEE
Confidence 22 2589999998632211 134444433 7898888754
No 249
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.11 E-value=1.1e-10 Score=115.12 Aligned_cols=101 Identities=20% Similarity=0.112 Sum_probs=84.5
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCc-EEEEEccccccc---CCCceeEEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDK-VIVLHGRVEDVE---IDEEVDVII 183 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~-v~~~~~d~~~l~---~~~~~DlVv 183 (428)
.++.+|||++||+|.+++.+++. |+++|+++|++ ..++.++++++.|++.++ ++++++|+.++. ..++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46789999999999999999984 66799999999 999999999999999877 999999987753 246899999
Q ss_pred EecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 184 SEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 184 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
.++.+ ....++..+.++|++||+++.+.
T Consensus 131 lDP~g-------~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDPFG-------TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECCSS-------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCc-------CHHHHHHHHHHHhCCCCEEEEEe
Confidence 98721 13457788888899999887643
No 250
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.11 E-value=1.3e-10 Score=103.38 Aligned_cols=97 Identities=25% Similarity=0.272 Sum_probs=71.1
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHc-CC---------CeEEEEeChHHHHHHHHHHHHCCCCCcEEEE-Eccccccc----
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQA-GA---------KRVYAVDASDIAVQANEVVKANNLTDKVIVL-HGRVEDVE---- 174 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~-g~---------~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~-~~d~~~l~---- 174 (428)
..++.+|||+|||+|.++..+++. +. .+|+|+|++++. .+ .+++++ .+|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------~~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------PL-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------CC-TTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------cC-CCCeEEEeccCCCHHHHHH
Confidence 467899999999999999999987 54 689999999531 12 348888 88876643
Q ss_pred ----CC-CceeEEEEecchhh-hcchhhH-------HHHHHHHhcccccCeEEEcc
Q 014247 175 ----ID-EEVDVIISEWMGYM-LLYESML-------GSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 ----~~-~~~DlVvs~~~~~~-l~~~~~~-------~~~l~~~~~~LkpgG~lv~~ 217 (428)
++ ++||+|+++...+. ..+..+. ..+++++.++|+|||.+++.
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCK 144 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 22 58999999642111 1121222 57899999999999999864
No 251
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.10 E-value=6.5e-11 Score=110.83 Aligned_cols=96 Identities=16% Similarity=-0.023 Sum_probs=77.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHH--CCC-CCcEEEEEcccccccCCCceeEEEEec
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKA--NNL-TDKVIVLHGRVEDVEIDEEVDVIISEW 186 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~l~~~~~~DlVvs~~ 186 (428)
..+++|||||||+|.++..+++.+ .+|+++|++ .+++.|++++.. +++ ..+++++.+|..+.. ++||+|++..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~ 147 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCLQ 147 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEESS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEECC
Confidence 456899999999999999998886 899999999 999988876432 112 347999999998865 7899999863
Q ss_pred chhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 187 MGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 187 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.++..+++.+.+.|+|||+++..
T Consensus 148 --------~dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 148 --------EPDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp --------CCCHHHHHHHHTTEEEEEEEEEE
T ss_pred --------CChHHHHHHHHHhcCCCcEEEEE
Confidence 12334899999999999999864
No 252
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.10 E-value=3.1e-10 Score=113.91 Aligned_cols=115 Identities=16% Similarity=0.151 Sum_probs=89.1
Q ss_pred HhccCCCCCCEEEEEcCCCcHHHHHHHHcCC-CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc--CC-Cce
Q 014247 105 MQNQSFIEGKVVVDVGCGTGILSIFCAQAGA-KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE--ID-EEV 179 (428)
Q Consensus 105 ~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~-~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~--~~-~~~ 179 (428)
...+...++.+|||+|||+|..+..+++.+. .+|+|+|++ .++..+++++..+++. ++++++|+.+++ ++ ++|
T Consensus 239 ~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~--~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp HHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC--CEEEECCTTCTHHHHTTCCE
T ss_pred HHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC--eEEEeCchhhchhhcccCCC
Confidence 3344557889999999999999999998743 599999999 9999999999998873 789999998765 23 689
Q ss_pred eEEEEecchh---hhcchhh----------------HHHHHHHHhcccccCeEEEccCCee
Q 014247 180 DVIISEWMGY---MLLYESM----------------LGSVITARDRWLKRGGLILPSYATL 221 (428)
Q Consensus 180 DlVvs~~~~~---~l~~~~~----------------~~~~l~~~~~~LkpgG~lv~~~~~~ 221 (428)
|+|+++...+ .+...++ ...++..+.++|||||+++.+++++
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 9999864211 1111111 1578999999999999999876543
No 253
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.03 E-value=6.4e-10 Score=109.43 Aligned_cols=98 Identities=22% Similarity=0.193 Sum_probs=82.2
Q ss_pred CCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHC---------------CCCCcEEEEEccccccc
Q 014247 112 EGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKAN---------------NLTDKVIVLHGRVEDVE 174 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~---------------~~~~~v~~~~~d~~~l~ 174 (428)
++.+|||+|||+|.+++.+++. +..+|+++|++ ..++.++++++.+ ++.+ ++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHHHH
Confidence 6789999999999999999987 66689999999 9999999999998 7765 999999987753
Q ss_pred C--CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 I--DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 ~--~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
. .++||+|+.++.+ ....++..+.+.|++||+++++
T Consensus 126 ~~~~~~fD~I~lDP~~-------~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 126 AERHRYFHFIDLDPFG-------SPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HHSTTCEEEEEECCSS-------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred HhccCCCCEEEeCCCC-------CHHHHHHHHHHhcCCCCEEEEE
Confidence 2 3689999987632 1356778888899999988764
No 254
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.02 E-value=5.3e-10 Score=109.98 Aligned_cols=108 Identities=15% Similarity=0.136 Sum_probs=80.2
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI- 175 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~- 175 (428)
+.+...+.+.+.. .+.+|||+|||+|.+++.+|+. +.+|+|+|++ .+++.|+++++.+++. +++++++|+.++..
T Consensus 200 ~~l~~~~~~~~~~-~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 200 IQMLEWALDVTKG-SKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHID-NVQIIRMAAEEFTQA 276 (369)
T ss_dssp HHHHHHHHHHTTT-CCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCC-SEEEECCCSHHHHHH
T ss_pred HHHHHHHHHHhhc-CCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHHHH
Confidence 4555556555543 3678999999999999999985 6699999999 9999999999999985 69999999877521
Q ss_pred -C---------------CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 -D---------------EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 -~---------------~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
. .+||+|+.++.... +...+.+.|+++|.++..
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g---------~~~~~~~~l~~~g~ivyv 325 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPRSG---------LDSETEKMVQAYPRILYI 325 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCTTC---------CCHHHHHHHTTSSEEEEE
T ss_pred HhhccccccccccccccCCCCEEEECcCccc---------cHHHHHHHHhCCCEEEEE
Confidence 1 27999998763221 112334455678877643
No 255
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.01 E-value=7.3e-10 Score=104.78 Aligned_cols=105 Identities=18% Similarity=0.148 Sum_probs=72.6
Q ss_pred HHHHHHHH-hccCCCCCCEEEEEcCCC------cHHHHHHHH-cC-CCeEEEEeChHHHHHHHHHHHHCCCCCcEEE-EE
Q 014247 98 ETYRAAIM-QNQSFIEGKVVVDVGCGT------GILSIFCAQ-AG-AKRVYAVDASDIAVQANEVVKANNLTDKVIV-LH 167 (428)
Q Consensus 98 ~~~~~~i~-~~~~~~~~~~VLDiGcGt------G~ls~~la~-~g-~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~-~~ 167 (428)
..+.+.+. ..+...++.+|||+|||+ |. ..+++ .+ ..+|+|+|+++. + .++++ ++
T Consensus 48 ~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~------------v-~~v~~~i~ 112 (290)
T 2xyq_A 48 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF------------V-SDADSTLI 112 (290)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC------------B-CSSSEEEE
T ss_pred HHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC------------C-CCCEEEEE
Confidence 33444442 234567889999999954 66 33444 34 359999999933 1 24888 99
Q ss_pred cccccccCCCceeEEEEecchhh-----hc---chhhHHHHHHHHhcccccCeEEEcc
Q 014247 168 GRVEDVEIDEEVDVIISEWMGYM-----LL---YESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 168 ~d~~~l~~~~~~DlVvs~~~~~~-----l~---~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+|+.+++++++||+|+|+..... +. .......+++.+.++|||||.+++.
T Consensus 113 gD~~~~~~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~ 170 (290)
T 2xyq_A 113 GDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 170 (290)
T ss_dssp SCGGGCCCSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccCCccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999877789999999742111 01 1233568899999999999999863
No 256
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.01 E-value=2.9e-09 Score=101.93 Aligned_cols=113 Identities=12% Similarity=0.045 Sum_probs=84.4
Q ss_pred ccCCCCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC----Cce
Q 014247 107 NQSFIEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID----EEV 179 (428)
Q Consensus 107 ~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~----~~~ 179 (428)
.+...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++..++. +++++++|+.++... .+|
T Consensus 97 ~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~~f 175 (309)
T 2b9e_A 97 LLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSDPRYHEV 175 (309)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTCGGGTTE
T ss_pred HhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCccccccCCC
Confidence 334578999999999999999999985 44699999999 9999999999999886 499999999887542 579
Q ss_pred eEEEEecc----hhhhcc----------hhh-------HHHHHHHHhcccccCeEEEccCCee
Q 014247 180 DVIISEWM----GYMLLY----------ESM-------LGSVITARDRWLKRGGLILPSYATL 221 (428)
Q Consensus 180 DlVvs~~~----~~~l~~----------~~~-------~~~~l~~~~~~LkpgG~lv~~~~~~ 221 (428)
|+|+++.. +.+-.+ ..+ ...+|..+.++|+ ||+|+.+++++
T Consensus 176 D~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 176 HYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred CEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 99998542 111110 011 1346777778887 99988765543
No 257
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.01 E-value=7.2e-10 Score=107.97 Aligned_cols=106 Identities=21% Similarity=0.134 Sum_probs=81.7
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcCC------CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEE
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAGA------KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVI 182 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g~------~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlV 182 (428)
..++.+|||+|||+|.++..+++... .+|+|+|++ .++..|+.++..+++ ++.++++|.......++||+|
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~~~~~fD~I 205 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANLLVDPVDVV 205 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCCCCCCEEEE
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCccccCCccEE
Confidence 34678999999999999998887631 589999999 999999999887777 489999998765445789999
Q ss_pred EEecchhhhcch--------------hhH-HHHHHHHhcccccCeEEEcc
Q 014247 183 ISEWMGYMLLYE--------------SML-GSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 183 vs~~~~~~l~~~--------------~~~-~~~l~~~~~~LkpgG~lv~~ 217 (428)
++++........ .+. ..++..+.+.|+|||++++.
T Consensus 206 i~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 206 ISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp EEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 999742121110 011 25788899999999988753
No 258
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.00 E-value=2e-09 Score=99.68 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=67.5
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID- 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~- 176 (428)
.+.+.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|++ .++..+++++... ++++++++|+.+++++
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~~ 92 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFPK 92 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCCS
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCccc
Confidence 455667777777788999999999999999999987 599999999 9999998876432 4699999999998765
Q ss_pred -CceeEEEEec
Q 014247 177 -EEVDVIISEW 186 (428)
Q Consensus 177 -~~~DlVvs~~ 186 (428)
..| .|++++
T Consensus 93 ~~~~-~vv~nl 102 (244)
T 1qam_A 93 NQSY-KIFGNI 102 (244)
T ss_dssp SCCC-EEEEEC
T ss_pred CCCe-EEEEeC
Confidence 345 566664
No 259
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.00 E-value=6.8e-10 Score=110.98 Aligned_cols=109 Identities=17% Similarity=0.118 Sum_probs=80.7
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc--CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA--GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI 175 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~ 175 (428)
...+.+.+.+...++.+|||+|||+|.++..+++. ...+|+|+|++ .+++.| .++.++++|+.+...
T Consensus 26 ~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~~ 95 (421)
T 2ih2_A 26 EVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWEP 95 (421)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCCC
T ss_pred HHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcCc
Confidence 34555556555456779999999999999999985 34599999999 777655 359999999998766
Q ss_pred CCceeEEEEecchhhhcc---------hh-----------------hHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLLY---------ES-----------------MLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~---------~~-----------------~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.++||+|++++....... .. ....+++.+.++|+|||.+++.
T Consensus 96 ~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i 163 (421)
T 2ih2_A 96 GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFV 163 (421)
T ss_dssp SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 689999999863211111 11 1236788899999999988753
No 260
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.00 E-value=8e-10 Score=106.84 Aligned_cols=120 Identities=21% Similarity=0.151 Sum_probs=84.5
Q ss_pred HHHHHHHhccC-CCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHC---CCC----CcEEEEEcc
Q 014247 99 TYRAAIMQNQS-FIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKAN---NLT----DKVIVLHGR 169 (428)
Q Consensus 99 ~~~~~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~---~~~----~~v~~~~~d 169 (428)
.|.+.+..... ...+++||+||||+|.++..+++.++.+|++||++ .+++.|++++... .+. ++++++.+|
T Consensus 174 ~YhE~l~~~~~~~p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~D 253 (364)
T 2qfm_A 174 AYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED 253 (364)
T ss_dssp HHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC
T ss_pred HHHHHHhhhhhhCCCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECc
Confidence 45665544321 13578999999999999999999887899999999 9999999886422 132 269999999
Q ss_pred cccccC-----CCceeEEEEecch-hhh--cchhhHHHHHHHH----hcccccCeEEEccC
Q 014247 170 VEDVEI-----DEEVDVIISEWMG-YML--LYESMLGSVITAR----DRWLKRGGLILPSY 218 (428)
Q Consensus 170 ~~~l~~-----~~~~DlVvs~~~~-~~l--~~~~~~~~~l~~~----~~~LkpgG~lv~~~ 218 (428)
+.+... .++||+|+++... ..- .....-.++++.+ .++|+|||+++...
T Consensus 254 a~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 254 CIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 887432 4789999998632 100 0001124445554 89999999999654
No 261
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.99 E-value=1.5e-09 Score=103.04 Aligned_cols=84 Identities=18% Similarity=0.433 Sum_probs=70.8
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID- 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~- 176 (428)
.+.+.|.+.+...++.+|||||||+|.++..+++.+ .+|+|+|++ .++..+++++... ++++++++|+.+++++
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~~~ 112 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDLNK 112 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCccc
Confidence 445566666677788999999999999999999984 599999999 9999999987632 3699999999987765
Q ss_pred CceeEEEEec
Q 014247 177 EEVDVIISEW 186 (428)
Q Consensus 177 ~~~DlVvs~~ 186 (428)
.+||+|+++.
T Consensus 113 ~~fD~Iv~Nl 122 (295)
T 3gru_A 113 LDFNKVVANL 122 (295)
T ss_dssp SCCSEEEEEC
T ss_pred CCccEEEEeC
Confidence 4799999985
No 262
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.97 E-value=2.3e-11 Score=112.77 Aligned_cols=113 Identities=16% Similarity=0.195 Sum_probs=80.1
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC--C
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID--E 177 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~--~ 177 (428)
.+.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|++ .+++.|++++. ..++++++++|+.+++++ +
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~~~~ 93 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQFPNKQ 93 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTCCCSS
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCcccCC
Confidence 3445555566788899999999999999999987 599999999 99888876654 235799999999998765 5
Q ss_pred ceeEEEEecchhh--------hcchhhHHHHH----HHHhcccccCeEEEccC
Q 014247 178 EVDVIISEWMGYM--------LLYESMLGSVI----TARDRWLKRGGLILPSY 218 (428)
Q Consensus 178 ~~DlVvs~~~~~~--------l~~~~~~~~~l----~~~~~~LkpgG~lv~~~ 218 (428)
+| .|++++..+. +.+......++ +.+.++|+|||.+++..
T Consensus 94 ~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 94 RY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred Cc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 78 7777652111 00011111222 55788899998776543
No 263
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.96 E-value=9.5e-10 Score=110.88 Aligned_cols=118 Identities=19% Similarity=0.100 Sum_probs=89.7
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc--------------CCCeEEEEeCh-HHHHHHHHHHHHCCCCC-c
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA--------------GAKRVYAVDAS-DIAVQANEVVKANNLTD-K 162 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~--------------g~~~V~giD~s-~~~~~a~~~~~~~~~~~-~ 162 (428)
...+.+.+.+...++.+|||.|||+|.+...+++. ...+++|+|++ .++..|+.++..+++.. .
T Consensus 158 ~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~ 237 (445)
T 2okc_A 158 PLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDR 237 (445)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCC
Confidence 45556666666677889999999999999888764 12479999999 99999999988888753 5
Q ss_pred EEEEEcccccccCCCceeEEEEecchhhhcchh--------------hHHHHHHHHhcccccCeEEEc
Q 014247 163 VIVLHGRVEDVEIDEEVDVIISEWMGYMLLYES--------------MLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 163 v~~~~~d~~~l~~~~~~DlVvs~~~~~~l~~~~--------------~~~~~l~~~~~~LkpgG~lv~ 216 (428)
+.+.++|....+...+||+|++++......... ....++..+.++|+|||++++
T Consensus 238 ~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 238 SPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp CSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEE
Confidence 788999987766557999999987422211110 123678889999999998875
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.95 E-value=2.3e-09 Score=99.79 Aligned_cols=83 Identities=10% Similarity=0.200 Sum_probs=67.8
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID- 176 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~- 176 (428)
.+.+.|.+.+...++.+|||||||+|.++..+++.+ .+|+|+|++ .+++.+++++.. .++++++++|+.+++++
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSS 91 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHH
Confidence 344556666666788999999999999999999986 599999999 999999988754 24699999999988653
Q ss_pred ----CceeEEEEec
Q 014247 177 ----EEVDVIISEW 186 (428)
Q Consensus 177 ----~~~DlVvs~~ 186 (428)
++|| |++++
T Consensus 92 ~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 92 VKTDKPLR-VVGNL 104 (255)
T ss_dssp SCCSSCEE-EEEEC
T ss_pred hccCCCeE-EEecC
Confidence 4688 77765
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.94 E-value=3.1e-09 Score=99.64 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=71.5
Q ss_pred hhhhccChhhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEE
Q 014247 87 HEEMIKDRVRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIV 165 (428)
Q Consensus 87 ~~~~~~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~ 165 (428)
.+.++.|. .+.+.|.+.+...++ +|||||||+|.++..+++.+ .+|+|+|++ .+++.+++++.. .++++
T Consensus 26 GQnfL~d~----~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~----~~v~v 95 (271)
T 3fut_A 26 GQNFLVSE----AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSG----LPVRL 95 (271)
T ss_dssp SCCEECCH----HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTT----SSEEE
T ss_pred CccccCCH----HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCC----CCEEE
Confidence 33445453 344555566666778 99999999999999999997 489999999 999999887652 46999
Q ss_pred EEcccccccCC--CceeEEEEec
Q 014247 166 LHGRVEDVEID--EEVDVIISEW 186 (428)
Q Consensus 166 ~~~d~~~l~~~--~~~DlVvs~~ 186 (428)
+++|+.+++++ ..+|.|++++
T Consensus 96 i~~D~l~~~~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 96 VFQDALLYPWEEVPQGSLLVANL 118 (271)
T ss_dssp EESCGGGSCGGGSCTTEEEEEEE
T ss_pred EECChhhCChhhccCccEEEecC
Confidence 99999988765 3689999986
No 266
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.87 E-value=7e-09 Score=110.02 Aligned_cols=121 Identities=20% Similarity=0.200 Sum_probs=92.5
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCC-----------------------------------------
Q 014247 97 TETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGA----------------------------------------- 135 (428)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~----------------------------------------- 135 (428)
.+.+..++.......++..|||.+||+|.+++.+|..+.
T Consensus 175 ~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~ 254 (703)
T 3v97_A 175 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAE 254 (703)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcccc
Confidence 456777787777777889999999999999988886521
Q ss_pred --CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC---CceeEEEEecc-hhhhcchhhHHHHHHHHhccc
Q 014247 136 --KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID---EEVDVIISEWM-GYMLLYESMLGSVITARDRWL 208 (428)
Q Consensus 136 --~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~---~~~DlVvs~~~-~~~l~~~~~~~~~l~~~~~~L 208 (428)
.+|+|+|++ .+++.|++++..+|+.+.++|.++|+.++..+ ++||+|++++. +.-+.....+..+++.+.+.|
T Consensus 255 ~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~l 334 (703)
T 3v97_A 255 YSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIM 334 (703)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHH
T ss_pred CCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHH
Confidence 379999999 99999999999999998899999999987543 28999999973 222223334556665555544
Q ss_pred ---ccCeEEEcc
Q 014247 209 ---KRGGLILPS 217 (428)
Q Consensus 209 ---kpgG~lv~~ 217 (428)
.|||.+++-
T Consensus 335 k~~~~g~~~~il 346 (703)
T 3v97_A 335 KNQFGGWNLSLF 346 (703)
T ss_dssp HHHCTTCEEEEE
T ss_pred HhhCCCCeEEEE
Confidence 479977653
No 267
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.82 E-value=4.3e-08 Score=87.39 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=75.2
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCC--CCcEEEEEcccccc---------------
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNL--TDKVIVLHGRVEDV--------------- 173 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~--~~~v~~~~~d~~~l--------------- 173 (428)
+.++|||+||| ..+..+|+...++|++||.+ +.++.|+++++..++ .++|+++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 45799999984 67788887534699999999 999999999999998 88999999996542
Q ss_pred --------cCC--CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 174 --------EID--EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 174 --------~~~--~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
... ++||+|+... -. ...++..+.++|+|||++++..
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg---~k-----~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDG---RF-----RVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECS---SS-----HHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHhhhhhccccCCCCCEEEEeC---CC-----chhHHHHHHHhcCCCeEEEEeC
Confidence 122 7899999865 11 1244444568899999998654
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.81 E-value=2.6e-09 Score=99.57 Aligned_cols=78 Identities=17% Similarity=0.140 Sum_probs=61.6
Q ss_pred CCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChH--------HHHHHHHHHHHCCCCCcEEEEEcccccc-c-CC--
Q 014247 109 SFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASD--------IAVQANEVVKANNLTDKVIVLHGRVEDV-E-ID-- 176 (428)
Q Consensus 109 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~--------~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~-~~-- 176 (428)
...++.+|||+|||+|.+++.+|+.|. +|+|+|+++ +++.|+++++.+++.++++++++|+.++ + ++
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 335678999999999999999999865 899999995 3444666666666666799999999875 2 22
Q ss_pred -CceeEEEEecc
Q 014247 177 -EEVDVIISEWM 187 (428)
Q Consensus 177 -~~~DlVvs~~~ 187 (428)
++||+|+++++
T Consensus 159 ~~~fD~V~~dP~ 170 (258)
T 2r6z_A 159 QGKPDIVYLDPM 170 (258)
T ss_dssp HCCCSEEEECCC
T ss_pred CCCccEEEECCC
Confidence 68999999764
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.80 E-value=1.2e-08 Score=96.02 Aligned_cols=81 Identities=19% Similarity=0.160 Sum_probs=64.9
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCe----EEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKR----VYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE 174 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~----V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~ 174 (428)
+.+.|.+.+...++.+|||||||+|.++..+++.+. + |+|+|++ .|++.++++. ..+++++++|+.+++
T Consensus 30 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 30 VIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFD 103 (279)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCC
T ss_pred HHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCC
Confidence 444555666667889999999999999999999855 4 9999999 9999998873 246999999999987
Q ss_pred CCC-------ceeEEEEec
Q 014247 175 IDE-------EVDVIISEW 186 (428)
Q Consensus 175 ~~~-------~~DlVvs~~ 186 (428)
++. ..+.|++++
T Consensus 104 ~~~~~~~~~~~~~~vv~Nl 122 (279)
T 3uzu_A 104 FGSIARPGDEPSLRIIGNL 122 (279)
T ss_dssp GGGGSCSSSSCCEEEEEEC
T ss_pred hhHhcccccCCceEEEEcc
Confidence 653 234677775
No 270
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.77 E-value=1e-08 Score=95.14 Aligned_cols=83 Identities=18% Similarity=0.296 Sum_probs=66.1
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDE 177 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~ 177 (428)
.+.+.|.+.+...++.+|||||||+|.++..+++.|+.+|+|+|++ .++..++++ . ..+++++++|+.+++++.
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI----G-DERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS----C-CTTEEEECSCTTTCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc----c-CCCeEEEEcchhhCChhH
Confidence 4455666666677889999999999999999999876799999999 999888765 1 346999999999887653
Q ss_pred c--eeEEEEec
Q 014247 178 E--VDVIISEW 186 (428)
Q Consensus 178 ~--~DlVvs~~ 186 (428)
. ...|+++.
T Consensus 93 ~~~~~~vv~Nl 103 (249)
T 3ftd_A 93 LGKELKVVGNL 103 (249)
T ss_dssp SCSSEEEEEEC
T ss_pred ccCCcEEEEEC
Confidence 1 23677765
No 271
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.77 E-value=1.1e-08 Score=97.45 Aligned_cols=81 Identities=20% Similarity=0.287 Sum_probs=67.4
Q ss_pred HHhccCCCCCCEEEEEcCCCcHHHHHHHHcC-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC--C---
Q 014247 104 IMQNQSFIEGKVVVDVGCGTGILSIFCAQAG-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--D--- 176 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--~--- 176 (428)
+.+.+...++.+|||+|||+|.++..+++.. ..+|+|+|.+ .+++.|++++..++ ++++++++|+.+++. .
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g 95 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLG 95 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTT
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcC
Confidence 3344555788999999999999999999873 4599999999 99999999988776 579999999988742 1
Q ss_pred -CceeEEEEec
Q 014247 177 -EEVDVIISEW 186 (428)
Q Consensus 177 -~~~DlVvs~~ 186 (428)
.+||.|++++
T Consensus 96 ~~~~D~Vl~D~ 106 (301)
T 1m6y_A 96 IEKVDGILMDL 106 (301)
T ss_dssp CSCEEEEEEEC
T ss_pred CCCCCEEEEcC
Confidence 5799999875
No 272
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.74 E-value=1.1e-08 Score=101.11 Aligned_cols=73 Identities=23% Similarity=0.238 Sum_probs=64.3
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHC--CCCCcEEEEEcccccc-cC--CCceeEEEEe
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKAN--NLTDKVIVLHGRVEDV-EI--DEEVDVIISE 185 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~--~~~~~v~~~~~d~~~l-~~--~~~~DlVvs~ 185 (428)
+|.+|||+|||+|..+..+++.+. +|+++|++ .+++.|+++++.+ ++ ++++++++|+.+. +. .++||+|+++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 489999999999999999999865 99999999 9999999999987 77 5799999999874 32 2589999997
Q ss_pred c
Q 014247 186 W 186 (428)
Q Consensus 186 ~ 186 (428)
+
T Consensus 171 P 171 (410)
T 3ll7_A 171 P 171 (410)
T ss_dssp C
T ss_pred C
Confidence 6
No 273
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.66 E-value=1.5e-08 Score=94.17 Aligned_cols=81 Identities=12% Similarity=0.169 Sum_probs=62.4
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCe--EEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC
Q 014247 100 YRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKR--VYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 100 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~--V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~ 176 (428)
+.+.|.+.+...++.+|||||||+|.++. +++ + .+ |+|+|++ .|+..+++++... ++++++++|+.+++++
T Consensus 9 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 9 VIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFG 82 (252)
T ss_dssp HHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHH
T ss_pred HHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHH
Confidence 44455555566788999999999999999 765 3 36 9999999 9999888765432 3699999999987654
Q ss_pred C------ceeEEEEec
Q 014247 177 E------EVDVIISEW 186 (428)
Q Consensus 177 ~------~~DlVvs~~ 186 (428)
. ..|.|+++.
T Consensus 83 ~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 83 ELAEKMGQPLRVFGNL 98 (252)
T ss_dssp HHHHHHTSCEEEEEEC
T ss_pred HhhcccCCceEEEECC
Confidence 2 347888876
No 274
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.66 E-value=9e-09 Score=95.69 Aligned_cols=85 Identities=19% Similarity=0.254 Sum_probs=64.1
Q ss_pred HHHHhccCCCCC--CEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHH---C----C-CCCcEEEEEccc
Q 014247 102 AAIMQNQSFIEG--KVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKA---N----N-LTDKVIVLHGRV 170 (428)
Q Consensus 102 ~~i~~~~~~~~~--~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~---~----~-~~~~v~~~~~d~ 170 (428)
+.+.+.+...++ .+|||+|||+|..++.+|+.|+ +|+++|.+ .++..+++.++. + + +.++++++++|+
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 344455555566 8999999999999999999977 79999999 776666555432 1 2 324699999999
Q ss_pred cccc--CCCceeEEEEecc
Q 014247 171 EDVE--IDEEVDVIISEWM 187 (428)
Q Consensus 171 ~~l~--~~~~~DlVvs~~~ 187 (428)
.++. .+.+||+|+++++
T Consensus 155 ~~~L~~~~~~fDvV~lDP~ 173 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPM 173 (258)
T ss_dssp HHHSTTCSSCCSEEEECCC
T ss_pred HHHHHhCcccCCEEEEcCC
Confidence 8742 2357999999874
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.59 E-value=7.3e-08 Score=99.19 Aligned_cols=118 Identities=10% Similarity=-0.060 Sum_probs=86.0
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc----C---------------CCeEEEEeCh-HHHHHHHHHHHHCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA----G---------------AKRVYAVDAS-DIAVQANEVVKANN 158 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~----g---------------~~~V~giD~s-~~~~~a~~~~~~~~ 158 (428)
...+.+.+.+...++.+|||.+||+|.+...+++. + ..+++|+|++ .++..|+.++..++
T Consensus 156 ~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g 235 (541)
T 2ar0_A 156 PLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD 235 (541)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC
Confidence 34455666666667889999999999998888764 1 1379999999 99999999888777
Q ss_pred CCC----cEEEEEcccccccC--CCceeEEEEecchhhhcc-----------hhhHHHHHHHHhcccccCeEEEc
Q 014247 159 LTD----KVIVLHGRVEDVEI--DEEVDVIISEWMGYMLLY-----------ESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 159 ~~~----~v~~~~~d~~~l~~--~~~~DlVvs~~~~~~l~~-----------~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
... ++.+.++|....+. ..+||+|++++....... ...-..++..+.++|+|||++.+
T Consensus 236 i~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~ 310 (541)
T 2ar0_A 236 IEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAV 310 (541)
T ss_dssp CCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEE
Confidence 754 27788998765431 368999999874222211 01123678888999999998875
No 276
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.51 E-value=3.9e-07 Score=85.69 Aligned_cols=108 Identities=15% Similarity=0.178 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHC--C-C-CCcEEEEEcccccccC--CCceeEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKAN--N-L-TDKVIVLHGRVEDVEI--DEEVDVI 182 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~--~-~-~~~v~~~~~d~~~l~~--~~~~DlV 182 (428)
...++||-||.|.|..+..+++. +.++|+.||++ .+++.+++.+... + + ..+++++.+|....-. .++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 45689999999999999999997 56799999999 8999998876431 1 2 4689999999887533 3899999
Q ss_pred EEecchhhhcch-hhHHHHHHHHhcccccCeEEEccC
Q 014247 183 ISEWMGYMLLYE-SMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 183 vs~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+........... ..-.++++.+++.|+|||+++...
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 997632111111 124578899999999999999643
No 277
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.49 E-value=7.9e-08 Score=88.77 Aligned_cols=110 Identities=15% Similarity=0.199 Sum_probs=69.4
Q ss_pred HhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-CCceeE
Q 014247 105 MQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-DEEVDV 181 (428)
Q Consensus 105 ~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-~~~~Dl 181 (428)
.+.....++.+|||||||+|.++..+++. ++..|+|+|++ .+....... .....++..+..++....+ +++||+
T Consensus 67 ~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~---~~~g~~ii~~~~~~dv~~l~~~~~Dl 143 (277)
T 3evf_A 67 HERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV---QSLGWNIITFKDKTDIHRLEPVKCDT 143 (277)
T ss_dssp HHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC---CBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred HHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc---CcCCCCeEEEeccceehhcCCCCccE
Confidence 33344567889999999999999999876 67789999998 542111100 0001134445555543333 378999
Q ss_pred EEEecchhhhcchhh---HHHHHHHHhcccccC-eEEEcc
Q 014247 182 IISEWMGYMLLYESM---LGSVITARDRWLKRG-GLILPS 217 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~---~~~~l~~~~~~Lkpg-G~lv~~ 217 (428)
|+|+...+.-.+..+ .-.+|+.+.++|+|| |.+++.
T Consensus 144 VlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 144 LLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 999863331111111 123478888999999 999863
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.43 E-value=2.8e-07 Score=94.77 Aligned_cols=117 Identities=12% Similarity=-0.026 Sum_probs=82.4
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc--------C--------CCeEEEEeCh-HHHHHHHHHHHHCCCCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA--------G--------AKRVYAVDAS-DIAVQANEVVKANNLTD 161 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~--------g--------~~~V~giD~s-~~~~~a~~~~~~~~~~~ 161 (428)
...+.|.+.+...++ +|||.+||+|.+...+++. + ...++|+|++ .++..|+.++..+++..
T Consensus 232 ~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 310 (544)
T 3khk_A 232 SIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDF 310 (544)
T ss_dssp HHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 344555555544444 9999999999988777542 0 2379999999 99999999998888876
Q ss_pred cEEEEEcccccccC--CCceeEEEEecchhhhcc-------------------------hh-hHHHHHHHHhcccccCeE
Q 014247 162 KVIVLHGRVEDVEI--DEEVDVIISEWMGYMLLY-------------------------ES-MLGSVITARDRWLKRGGL 213 (428)
Q Consensus 162 ~v~~~~~d~~~l~~--~~~~DlVvs~~~~~~l~~-------------------------~~-~~~~~l~~~~~~LkpgG~ 213 (428)
++.+.++|....+. ..+||+|++++....-.+ .. .--.++..+.+.|+|||+
T Consensus 311 ~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 390 (544)
T 3khk_A 311 NFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGS 390 (544)
T ss_dssp BCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEE
T ss_pred ccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCce
Confidence 66557888655432 378999999874321100 00 012578888999999998
Q ss_pred EEc
Q 014247 214 ILP 216 (428)
Q Consensus 214 lv~ 216 (428)
+.+
T Consensus 391 ~ai 393 (544)
T 3khk_A 391 MAL 393 (544)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 279
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.37 E-value=1.3e-06 Score=89.76 Aligned_cols=106 Identities=11% Similarity=0.036 Sum_probs=80.4
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHc----CCCeEEEEeCh-HHHHHHHHHHHHCCCC-CcEEEEEcccccc--cC--CCce
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQA----GAKRVYAVDAS-DIAVQANEVVKANNLT-DKVIVLHGRVEDV--EI--DEEV 179 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~----g~~~V~giD~s-~~~~~a~~~~~~~~~~-~~v~~~~~d~~~l--~~--~~~~ 179 (428)
..++.+|||.+||+|.+...+++. +...++|+|++ .++..|+.++..+++. +++.+.++|.... +. ..+|
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccc
Confidence 346789999999999998888775 24589999999 8999999998888885 4689999997765 22 3789
Q ss_pred eEEEEecchhhhcch--------------------hh-HHHHHHHHhcccc-cCeEEEc
Q 014247 180 DVIISEWMGYMLLYE--------------------SM-LGSVITARDRWLK-RGGLILP 216 (428)
Q Consensus 180 DlVvs~~~~~~l~~~--------------------~~-~~~~l~~~~~~Lk-pgG~lv~ 216 (428)
|+|++++... ..+. .. --.++..+.+.|+ |||++.+
T Consensus 299 D~IvaNPPf~-~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~ 356 (542)
T 3lkd_A 299 DGVLMNPPYS-AKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAI 356 (542)
T ss_dssp SEEEECCCTT-CCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEE
T ss_pred cEEEecCCcC-CccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEE
Confidence 9999987421 1110 00 1247888889999 9998764
No 280
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.36 E-value=3.4e-06 Score=79.14 Aligned_cols=120 Identities=18% Similarity=0.153 Sum_probs=86.7
Q ss_pred hhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc----C--CCeEEEEeCh-H----------------------
Q 014247 95 VRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA----G--AKRVYAVDAS-D---------------------- 145 (428)
Q Consensus 95 ~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~----g--~~~V~giD~s-~---------------------- 145 (428)
.+...+...+...........|||+|+..|..++.++.. + ..+|+++|.. .
T Consensus 89 ~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~ 168 (282)
T 2wk1_A 89 KRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNS 168 (282)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHH
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccc
Confidence 344455555544433345679999999999988887653 1 4589999953 1
Q ss_pred ----HHHHHHHHHHHCCCC-CcEEEEEcccccccC---CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 146 ----IAVQANEVVKANNLT-DKVIVLHGRVEDVEI---DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 146 ----~~~~a~~~~~~~~~~-~~v~~~~~d~~~l~~---~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
..+.+++++++.++. ++|+++.+++.+.-. .++||+|+... -. ++ .....|..+..+|+|||++++.
T Consensus 169 ~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDa---D~-y~-~~~~~Le~~~p~L~pGGiIv~D 243 (282)
T 2wk1_A 169 VLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDG---DL-YE-STWDTLTNLYPKVSVGGYVIVD 243 (282)
T ss_dssp HHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECC---CS-HH-HHHHHHHHHGGGEEEEEEEEES
T ss_pred cchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcC---Cc-cc-cHHHHHHHHHhhcCCCEEEEEc
Confidence 356688999999984 889999999876422 26899999764 11 22 2456788899999999999987
Q ss_pred CC
Q 014247 218 YA 219 (428)
Q Consensus 218 ~~ 219 (428)
..
T Consensus 244 D~ 245 (282)
T 2wk1_A 244 DY 245 (282)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 281
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.35 E-value=1.8e-07 Score=86.48 Aligned_cols=110 Identities=19% Similarity=0.214 Sum_probs=68.7
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc--ccccccCCCc
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG--RVEDVEIDEE 178 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~--d~~~l~~~~~ 178 (428)
.|.+.....++.+|||||||.|.++..+++. ++..|+|+|++ .+...+... .....++..+.. |+..++ +.+
T Consensus 81 ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~---~~~g~~ii~~~~~~dv~~l~-~~~ 156 (282)
T 3gcz_A 81 WMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR---TTLGWNLIRFKDKTDVFNME-VIP 156 (282)
T ss_dssp HHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC---CBTTGGGEEEECSCCGGGSC-CCC
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc---ccCCCceEEeeCCcchhhcC-CCC
Confidence 3444445678889999999999999998864 77789999998 643222110 001112333332 443332 378
Q ss_pred eeEEEEecchh----hhcchhhHHHHHHHHhcccccC--eEEEcc
Q 014247 179 VDVIISEWMGY----MLLYESMLGSVITARDRWLKRG--GLILPS 217 (428)
Q Consensus 179 ~DlVvs~~~~~----~l~~~~~~~~~l~~~~~~Lkpg--G~lv~~ 217 (428)
+|+|+|+...+ ...+.. ...+|.-+.++|+|| |.+++.
T Consensus 157 ~DvVLSDmApnsG~~~~D~~r-s~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 157 GDTLLCDIGESSPSIAVEEQR-TLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CSEEEECCCCCCSCHHHHHHH-HHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cCEEEecCccCCCChHHHHHH-HHHHHHHHHHHcCCCCCCcEEEE
Confidence 99999986433 111111 123477778999999 998853
No 282
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.31 E-value=1.6e-06 Score=84.27 Aligned_cols=115 Identities=17% Similarity=0.153 Sum_probs=86.7
Q ss_pred ccCCCCCCEEEEEcCCCcHHHHHHHHcCC-CeEEEEeCh-HHHHHHHHHHHHCCCC-----CcEEEEEccccccc--CCC
Q 014247 107 NQSFIEGKVVVDVGCGTGILSIFCAQAGA-KRVYAVDAS-DIAVQANEVVKANNLT-----DKVIVLHGRVEDVE--IDE 177 (428)
Q Consensus 107 ~~~~~~~~~VLDiGcGtG~ls~~la~~g~-~~V~giD~s-~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~l~--~~~ 177 (428)
.+...+|.+|||+.+|.|.=+..++..+. ..|+++|++ .-+...++++++.+.. .++.+...|...+. ..+
T Consensus 143 ~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~ 222 (359)
T 4fzv_A 143 ALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGD 222 (359)
T ss_dssp HHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTT
T ss_pred HhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccc
Confidence 44568999999999999999998888743 379999999 7788888888776543 46899999988764 247
Q ss_pred ceeEEEEecchhh----hcc-h---------h-------hHHHHHHHHhcccccCeEEEccCCee
Q 014247 178 EVDVIISEWMGYM----LLY-E---------S-------MLGSVITARDRWLKRGGLILPSYATL 221 (428)
Q Consensus 178 ~~DlVvs~~~~~~----l~~-~---------~-------~~~~~l~~~~~~LkpgG~lv~~~~~~ 221 (428)
+||.|+++...+. ... . . .-..+|....++|||||+|+-+++++
T Consensus 223 ~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 223 TYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp CEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred cCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 8999998753221 110 0 0 12467888889999999999877764
No 283
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.28 E-value=5.6e-07 Score=80.54 Aligned_cols=111 Identities=18% Similarity=0.218 Sum_probs=72.2
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEc-ccccccCCCcee
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHG-RVEDVEIDEEVD 180 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~-d~~~l~~~~~~D 180 (428)
.|.+.....++.+|||+||++|.++..++.. |+++|+|+|+..+-..--..++..|+. .|+|.++ |+..++. .++|
T Consensus 69 ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn-~v~fk~gvDv~~~~~-~~~D 146 (267)
T 3p8z_A 69 WFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWN-IVKLMSGKDVFYLPP-EKCD 146 (267)
T ss_dssp HHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTT-SEEEECSCCGGGCCC-CCCS
T ss_pred HHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcC-ceEEEeccceeecCC-cccc
Confidence 3333335678899999999999999988876 888999999982211000011233453 5999999 9877665 7899
Q ss_pred EEEEecchhhhcchhh---HHHHHHHHhcccccCeEEEc
Q 014247 181 VIISEWMGYMLLYESM---LGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~---~~~~l~~~~~~LkpgG~lv~ 216 (428)
+|+|+.-...-..+.+ .-.+|+-+.++|++ |-+++
T Consensus 147 tllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 147 TLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred EEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 9999752111111111 12266777899998 55553
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.22 E-value=3.6e-06 Score=81.29 Aligned_cols=69 Identities=19% Similarity=0.221 Sum_probs=56.6
Q ss_pred CCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCC-CceeEEEEec
Q 014247 110 FIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEID-EEVDVIISEW 186 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-~~~DlVvs~~ 186 (428)
..+|.+|||+||++|.++..+++.|. +|+|||..+|..... . ..+|+++++|.....++ .+||+|+|+.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~~~l~----~---~~~V~~~~~d~~~~~~~~~~~D~vvsDm 278 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMAQSLM----D---TGQVTWLREDGFKFRPTRSNISWMVCDM 278 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCCHHHH----T---TTCEEEECSCTTTCCCCSSCEEEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcChhhc----c---CCCeEEEeCccccccCCCCCcCEEEEcC
Confidence 36899999999999999999999987 899999876543322 1 13699999999887765 6899999975
No 285
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.19 E-value=1.7e-06 Score=80.34 Aligned_cols=106 Identities=17% Similarity=0.134 Sum_probs=69.9
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-------CC------CeEEEEeCh----HHHH-----------HHHHHHHHC-----
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-------GA------KRVYAVDAS----DIAV-----------QANEVVKAN----- 157 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-------g~------~~V~giD~s----~~~~-----------~a~~~~~~~----- 157 (428)
.++.+|||||+|+|..++.+++. +. .+++++|.. +.+. .|++.+...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 45679999999999987776543 22 389999964 2333 445554431
Q ss_pred -----CCC---CcEEEEEcccccc-cC-CC----ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 158 -----NLT---DKVIVLHGRVEDV-EI-DE----EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 158 -----~~~---~~v~~~~~d~~~l-~~-~~----~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
.+. .+++++.+|+.+. +. +. .||+|+...+.-.-..+---..+++.+.++|+|||+++.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 021 3588999998873 32 22 799999865221111111246789999999999999883
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.19 E-value=3.9e-06 Score=88.31 Aligned_cols=106 Identities=13% Similarity=0.072 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcC----CCeEEEEeCh-HHHHHH--HHHHHHCCCCC---cEEEEEccccccc--CCCc
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAG----AKRVYAVDAS-DIAVQA--NEVVKANNLTD---KVIVLHGRVEDVE--IDEE 178 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g----~~~V~giD~s-~~~~~a--~~~~~~~~~~~---~v~~~~~d~~~l~--~~~~ 178 (428)
.++.+|||.|||+|.+...+++.. ..+++|+|++ .++..| +.++..+.+.. ...+...|+.... ...+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 457899999999999999998863 2379999999 888888 44443322211 1355566666532 2378
Q ss_pred eeEEEEecchhh-hcch-------------------------hhHHHHHHHHhcccccCeEEEc
Q 014247 179 VDVIISEWMGYM-LLYE-------------------------SMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 179 ~DlVvs~~~~~~-l~~~-------------------------~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
||+|++++.... .... .....++..+.++|+|||++.+
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAf 463 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISA 463 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEE
Confidence 999999974211 0000 1133467888899999998875
No 287
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.19 E-value=2.2e-06 Score=83.13 Aligned_cols=120 Identities=21% Similarity=0.161 Sum_probs=85.8
Q ss_pred HHHHHHHHhccC-CCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHH---CCC----CCcEEEEEc
Q 014247 98 ETYRAAIMQNQS-FIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKA---NNL----TDKVIVLHG 168 (428)
Q Consensus 98 ~~~~~~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~---~~~----~~~v~~~~~ 168 (428)
..|.+.+....- ..+.++||-||.|.|..+..+.+...++|+.||++ .+++.+++.+.. ..+ .++++++.+
T Consensus 190 ~~Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~ 269 (381)
T 3c6k_A 190 LAYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE 269 (381)
T ss_dssp HHHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEES
T ss_pred HHHHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehH
Confidence 456666654321 23568999999999999999999877899999999 899999886432 111 246899999
Q ss_pred cccccc-----CCCceeEEEEecchhh-------hcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 169 RVEDVE-----IDEEVDVIISEWMGYM-------LLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 169 d~~~l~-----~~~~~DlVvs~~~~~~-------l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
|....- ..++||+|+....... ........++++.+++.|+|||+++..
T Consensus 270 Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 270 DCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 987642 2368999998753210 001122467889999999999999854
No 288
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.10 E-value=7.3e-06 Score=75.83 Aligned_cols=111 Identities=19% Similarity=0.226 Sum_probs=71.7
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc-ccccccCCCc
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG-RVEDVEIDEE 178 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~-d~~~l~~~~~ 178 (428)
..|.+.....++.+||||||++|.++..++.. |+++|+|+|+. .-.+. -..++..++ +-|.++.+ |+..++. .+
T Consensus 84 ~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~~ql~w-~lV~~~~~~Dv~~l~~-~~ 160 (321)
T 3lkz_A 84 RWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLVQSYGW-NIVTMKSGVDVFYRPS-EC 160 (321)
T ss_dssp HHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCCCBTTG-GGEEEECSCCTTSSCC-CC
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchhhhcCC-cceEEEeccCHhhCCC-CC
Confidence 34444455678889999999999999988776 88899999998 41100 000011222 23888888 8887765 67
Q ss_pred eeEEEEecchhhhcc-hhh---HHHHHHHHhcccccC-eEEEc
Q 014247 179 VDVIISEWMGYMLLY-ESM---LGSVITARDRWLKRG-GLILP 216 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~-~~~---~~~~l~~~~~~Lkpg-G~lv~ 216 (428)
+|+|+|+. +..-.. +.+ .-.+|+-+.++|++| |-+++
T Consensus 161 ~D~ivcDi-geSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 161 CDTLLCDI-GESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp CSEEEECC-CCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEEC-ccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 99999975 211111 111 122566667889888 76664
No 289
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.10 E-value=2e-05 Score=76.83 Aligned_cols=103 Identities=18% Similarity=0.237 Sum_probs=63.2
Q ss_pred CCEEEEEcCCCcHHHHHHHHc------------C----CCeEEEEeCh-HHHHHHHHHHHHC-----------CCCCcEE
Q 014247 113 GKVVVDVGCGTGILSIFCAQA------------G----AKRVYAVDAS-DIAVQANEVVKAN-----------NLTDKVI 164 (428)
Q Consensus 113 ~~~VLDiGcGtG~ls~~la~~------------g----~~~V~giD~s-~~~~~a~~~~~~~-----------~~~~~v~ 164 (428)
..+|+|+|||+|..++.++.. | .-+|+.-|+. ......-+.+... +...+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 579999999999998887321 1 1277788876 4433322222211 0000112
Q ss_pred EEEccccc---ccC-CCceeEEEEecchhhhcchh--------------------------------------hHHHHHH
Q 014247 165 VLHGRVED---VEI-DEEVDVIISEWMGYMLLYES--------------------------------------MLGSVIT 202 (428)
Q Consensus 165 ~~~~d~~~---l~~-~~~~DlVvs~~~~~~l~~~~--------------------------------------~~~~~l~ 202 (428)
|+.+.... -.+ ++++|+|+|+. .++|.. |+..+|+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~---aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~ 209 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAF---SLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLR 209 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEES---CTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecc---eeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33333222 223 48999999987 444432 5677899
Q ss_pred HHhcccccCeEEEccC
Q 014247 203 ARDRWLKRGGLILPSY 218 (428)
Q Consensus 203 ~~~~~LkpgG~lv~~~ 218 (428)
.+.+.|+|||++++..
T Consensus 210 ~ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 210 ARAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHHhCCCCEEEEEE
Confidence 9999999999999764
No 290
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.10 E-value=6.1e-06 Score=68.64 Aligned_cols=68 Identities=16% Similarity=0.237 Sum_probs=52.3
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCc-HHHHHHHH-cCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTG-ILSIFCAQ-AGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE 174 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG-~ls~~la~-~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~ 174 (428)
+.+.+.|.+.. .++.+|||||||+| ..+..|++ .|+ .|+++|++ ..+. +++.|+.+..
T Consensus 23 e~LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~----------------~v~dDiF~P~ 83 (153)
T 2k4m_A 23 NDLAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG----------------IVRDDITSPR 83 (153)
T ss_dssp HHHHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT----------------EECCCSSSCC
T ss_pred HHHHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc----------------eEEccCCCCc
Confidence 34566666554 45679999999999 59999997 787 89999999 4432 8888988744
Q ss_pred CC--CceeEEEE
Q 014247 175 ID--EEVDVIIS 184 (428)
Q Consensus 175 ~~--~~~DlVvs 184 (428)
+. +.||+|.+
T Consensus 84 ~~~Y~~~DLIYs 95 (153)
T 2k4m_A 84 MEIYRGAALIYS 95 (153)
T ss_dssp HHHHTTEEEEEE
T ss_pred ccccCCcCEEEE
Confidence 43 58999987
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.02 E-value=3.7e-06 Score=78.25 Aligned_cols=112 Identities=16% Similarity=0.103 Sum_probs=67.1
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCC-CcEEEEEc-ccccccCC
Q 014247 101 RAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLT-DKVIVLHG-RVEDVEID 176 (428)
Q Consensus 101 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~-~~v~~~~~-d~~~l~~~ 176 (428)
.++..+ --..++.+|||+||++|.++..+++. ++..|+|+|+. .+...... . .... +.+.+..+ |+..+. +
T Consensus 71 ~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~--~~~~~~iv~~~~~~di~~l~-~ 145 (300)
T 3eld_A 71 RWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-M--QTLGWNIVKFKDKSNVFTMP-T 145 (300)
T ss_dssp HHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-C--CBTTGGGEEEECSCCTTTSC-C
T ss_pred HHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-c--cccCCceEEeecCceeeecC-C
Confidence 334444 33467899999999999999999985 77789999997 43111000 0 0001 12333322 333322 3
Q ss_pred CceeEEEEecchhhhcchhh---HHHHHHHHhcccccC-eEEEcc
Q 014247 177 EEVDVIISEWMGYMLLYESM---LGSVITARDRWLKRG-GLILPS 217 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~---~~~~l~~~~~~Lkpg-G~lv~~ 217 (428)
+++|+|+|+...+.-.+..| ...+|.-+.++|+|| |.++..
T Consensus 146 ~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 146 EPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 78999999764331111111 133477778999999 999853
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.95 E-value=2.6e-05 Score=70.94 Aligned_cols=110 Identities=18% Similarity=0.205 Sum_probs=65.4
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHH-CCCCCcEEEEEc-ccccccCCC
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKA-NNLTDKVIVLHG-RVEDVEIDE 177 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~-~~~~~~v~~~~~-d~~~l~~~~ 177 (428)
..|.+..-..++.+|||+||+.|.++..+++. +...|.|.++. .. .. ...... .|+ +-+.|.++ |+.++. +.
T Consensus 63 ~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~-~P~~~~~~Gv-~~i~~~~G~Df~~~~-~~ 138 (269)
T 2px2_A 63 RWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HE-EPMLMQSYGW-NIVTMKSGVDVFYKP-SE 138 (269)
T ss_dssp HHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SC-CCCCCCSTTG-GGEEEECSCCGGGSC-CC
T ss_pred HHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-cc-CCCcccCCCc-eEEEeeccCCccCCC-CC
Confidence 34444434578999999999999999999986 33344455444 21 00 000000 111 12466667 998854 35
Q ss_pred ceeEEEEecchhhhc----chhhHHHHHHHHhcccccCe-EEEc
Q 014247 178 EVDVIISEWMGYMLL----YESMLGSVITARDRWLKRGG-LILP 216 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~----~~~~~~~~l~~~~~~LkpgG-~lv~ 216 (428)
++|+|+|......-. +...+. +|.-+.++|+||| .+++
T Consensus 139 ~~DvVLSDMAPnSG~~~vD~~Rs~~-aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 139 ISDTLLCDIGESSPSAEIEEQRTLR-ILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHH-HHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEeCCCCCCCccHHHHHHHHH-HHHHHHHHhhcCCcEEEE
Confidence 899999975322111 111122 5666678999999 7774
No 293
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.93 E-value=1.3e-05 Score=74.43 Aligned_cols=78 Identities=21% Similarity=0.268 Sum_probs=63.3
Q ss_pred HHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----C
Q 014247 103 AIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-----D 176 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-----~ 176 (428)
.+.+.+...++..+||.+||.|..+..+++.+ .+|+|+|.+ .+++.|++ +.. ++++++++++.++.. .
T Consensus 13 e~le~L~~~~gg~~VD~T~G~GGHS~~il~~~-g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g 86 (285)
T 1wg8_A 13 EALDLLAVRPGGVYVDATLGGAGHARGILERG-GRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAALG 86 (285)
T ss_dssp HHHHHHTCCTTCEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHTT
T ss_pred HHHHhhCCCCCCEEEEeCCCCcHHHHHHHHCC-CEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHcC
Confidence 34445556788999999999999999999984 499999999 88888877 533 479999999988742 1
Q ss_pred -CceeEEEEec
Q 014247 177 -EEVDVIISEW 186 (428)
Q Consensus 177 -~~~DlVvs~~ 186 (428)
+++|.|+.++
T Consensus 87 ~~~vDgIL~DL 97 (285)
T 1wg8_A 87 VERVDGILADL 97 (285)
T ss_dssp CSCEEEEEEEC
T ss_pred CCCcCEEEeCC
Confidence 5799999875
No 294
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.83 E-value=0.00017 Score=70.36 Aligned_cols=151 Identities=18% Similarity=0.195 Sum_probs=84.3
Q ss_pred CCEEEEEcCCCcHHHHHHHHc------------------CCCeEEEEeCh--HHHHH------HHHH-HHHCCCCCcEEE
Q 014247 113 GKVVVDVGCGTGILSIFCAQA------------------GAKRVYAVDAS--DIAVQ------ANEV-VKANNLTDKVIV 165 (428)
Q Consensus 113 ~~~VLDiGcGtG~ls~~la~~------------------g~~~V~giD~s--~~~~~------a~~~-~~~~~~~~~v~~ 165 (428)
..+|+|+||++|..++.+... ..-+|+..|+. ..-.. ..+. .+..+...+..|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 579999999999988877654 11167777865 22111 1111 122232122466
Q ss_pred EEcccccc---cC-CCceeEEEEecchhhhcchh---------------------------------------hHHHHHH
Q 014247 166 LHGRVEDV---EI-DEEVDVIISEWMGYMLLYES---------------------------------------MLGSVIT 202 (428)
Q Consensus 166 ~~~d~~~l---~~-~~~~DlVvs~~~~~~l~~~~---------------------------------------~~~~~l~ 202 (428)
+.+..... .+ .+++|+|+|+. .++|.. |+..+|+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~---aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCY---CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEES---CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecc---eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 66654442 23 38999999977 444422 2334488
Q ss_pred HHhcccccCeEEEccCCeeeEeecCCcc---chhhhh--------------h-hhhccCCCCcchhHHHHHhc-CCCCce
Q 014247 203 ARDRWLKRGGLILPSYATLYMAPVTHPD---RYSESI--------------D-FWRNVYGIDMSAMMPLAKQC-AFEEPS 263 (428)
Q Consensus 203 ~~~~~LkpgG~lv~~~~~~~~~~~~~~~---~~~~~~--------------~-~~~~~~~~~~~~l~~~l~~~-Gf~~~~ 263 (428)
.+.+.|+|||++++.....-.. ...+. ...... . +--..|..+.+++..+++++ +|....
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~-~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~ 288 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDE-FDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILY 288 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTT-TCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCc-ccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEE
Confidence 8899999999998753211000 00000 111110 0 11124566788899999987 577666
Q ss_pred EEee
Q 014247 264 VETI 267 (428)
Q Consensus 264 ~~~~ 267 (428)
++.+
T Consensus 289 le~~ 292 (384)
T 2efj_A 289 LETF 292 (384)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6544
No 295
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.80 E-value=2.5e-05 Score=75.64 Aligned_cols=153 Identities=13% Similarity=0.130 Sum_probs=89.5
Q ss_pred CCCEEEEEcCCCcHHHHHHHHc------------C-----CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-
Q 014247 112 EGKVVVDVGCGTGILSIFCAQA------------G-----AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED- 172 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~------------g-----~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~- 172 (428)
...+|+|+||++|..++.+... + .-+|+..|+. +....+.+.+.......+..|+.+....
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999877654432 2 1278899988 6666655544321100123555554433
Q ss_pred --ccC-CCceeEEEEecchhhhcch---------------------------------hhHHHHHHHHhcccccCeEEEc
Q 014247 173 --VEI-DEEVDVIISEWMGYMLLYE---------------------------------SMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 173 --l~~-~~~~DlVvs~~~~~~l~~~---------------------------------~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
-.+ .+++|+|+|+. .++|. .|+..+|+.+.+.|+|||++++
T Consensus 131 y~rlfp~~S~d~v~Ss~---aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSY---SLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SSCCSCTTCBSCEEEES---CTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hhccCCCCceEEEEehh---hhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 233 38999999976 33332 2456679999999999999987
Q ss_pred cCCeeeEe-ecCC--ccchhhhhhhhh------------------ccCCCCcchhHHHHHhcC-CCCceEEee
Q 014247 217 SYATLYMA-PVTH--PDRYSESIDFWR------------------NVYGIDMSAMMPLAKQCA-FEEPSVETI 267 (428)
Q Consensus 217 ~~~~~~~~-~~~~--~~~~~~~~~~~~------------------~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 267 (428)
.....-.. +... ...+......|. ..|..+.+++..++++.| |....++.+
T Consensus 208 ~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~ 280 (359)
T 1m6e_X 208 TILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEAS 280 (359)
T ss_dssp EEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEE
T ss_pred EEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 53211100 0000 011222222221 235566788999998884 566655544
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.68 E-value=0.0001 Score=69.75 Aligned_cols=57 Identities=28% Similarity=0.279 Sum_probs=47.4
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKAN 157 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~ 157 (428)
.+.+.+.+... .++.+|||++||+|..+..+++.|. +++|+|++ .+++.|++++...
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 44444545444 6889999999999999999999876 89999999 9999999988764
No 297
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.56 E-value=0.00013 Score=67.42 Aligned_cols=106 Identities=18% Similarity=0.124 Sum_probs=68.1
Q ss_pred HHHHHHHHHh-ccCCCCCCEEEEEcC------CCcHHHHHHHHcCCC--eEEEEeChHHHHHHHHHHHHCCCCCcEEEEE
Q 014247 97 TETYRAAIMQ-NQSFIEGKVVVDVGC------GTGILSIFCAQAGAK--RVYAVDASDIAVQANEVVKANNLTDKVIVLH 167 (428)
Q Consensus 97 ~~~~~~~i~~-~~~~~~~~~VLDiGc------GtG~ls~~la~~g~~--~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~ 167 (428)
+.++.+.+.. .+....+.+|||+|+ -.|. ..+.+.+.+ .|+++|+.++.. ..+ .+++
T Consensus 93 ytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s----------da~--~~Iq 158 (344)
T 3r24_A 93 YTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS----------DAD--STLI 158 (344)
T ss_dssp HHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC----------SSS--EEEE
T ss_pred HHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc----------CCC--eEEE
Confidence 3344444422 234457899999997 4455 334444433 899999985531 112 4599
Q ss_pred cccccccCCCceeEEEEecchhh---hcc-----hhhHHHHHHHHhcccccCeEEEc
Q 014247 168 GRVEDVEIDEEVDVIISEWMGYM---LLY-----ESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 168 ~d~~~l~~~~~~DlVvs~~~~~~---l~~-----~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
+|...+....+||+|+|..-... ... ....+.++.-+.+.|+|||.+++
T Consensus 159 GD~~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvV 215 (344)
T 3r24_A 159 GDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 215 (344)
T ss_dssp SCGGGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEE
Confidence 99887766789999999752111 111 12356677777889999999985
No 298
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.51 E-value=0.00032 Score=71.86 Aligned_cols=89 Identities=15% Similarity=0.120 Sum_probs=65.8
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc----C----------CCeEEEEeCh-HHHHHHHHHHHHCCCCCc
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA----G----------AKRVYAVDAS-DIAVQANEVVKANNLTDK 162 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~----g----------~~~V~giD~s-~~~~~a~~~~~~~~~~~~ 162 (428)
....+.+.+.+...++.+|+|-.||+|.+...+.+. . ...++|+|++ .+...|+-++--++...
T Consensus 203 ~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~- 281 (530)
T 3ufb_A 203 RPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY- 281 (530)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSC-
T ss_pred HHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcc-
Confidence 355666777777778889999999999998777653 1 1369999999 88888888777777653
Q ss_pred EEEEEcccccccC-----CCceeEEEEecc
Q 014247 163 VIVLHGRVEDVEI-----DEEVDVIISEWM 187 (428)
Q Consensus 163 v~~~~~d~~~l~~-----~~~~DlVvs~~~ 187 (428)
..+..+|....+. ..+||+|++++.
T Consensus 282 ~~I~~~dtL~~~~~~~~~~~~fD~Il~NPP 311 (530)
T 3ufb_A 282 PRIDPENSLRFPLREMGDKDRVDVILTNPP 311 (530)
T ss_dssp CEEECSCTTCSCGGGCCGGGCBSEEEECCC
T ss_pred ccccccccccCchhhhcccccceEEEecCC
Confidence 4667777654322 257999999984
No 299
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.06 E-value=0.00089 Score=64.63 Aligned_cols=80 Identities=13% Similarity=0.066 Sum_probs=58.9
Q ss_pred hhhhccChhhHHHHHHHHHhccCCC------CCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCC
Q 014247 87 HEEMIKDRVRTETYRAAIMQNQSFI------EGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANN 158 (428)
Q Consensus 87 ~~~~~~d~~r~~~~~~~i~~~~~~~------~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~ 158 (428)
.+.++.|..-.+.+.+++ ... ++..|||||.|.|.++..+++. .+++|+++|++ .++...++.. .
T Consensus 31 GQnFL~d~~i~~~Iv~~~----~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-- 103 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIFDKL----DLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-- 103 (353)
T ss_dssp GCCCBCCHHHHHHHHHHH----CGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--
T ss_pred CcCccCCHHHHHHHHHhc----cCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--
Confidence 344566655544444444 323 4689999999999999999986 45699999999 8888777665 2
Q ss_pred CCCcEEEEEccccccc
Q 014247 159 LTDKVIVLHGRVEDVE 174 (428)
Q Consensus 159 ~~~~v~~~~~d~~~l~ 174 (428)
.++++++++|+.++.
T Consensus 104 -~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 104 -GSPLQILKRDPYDWS 118 (353)
T ss_dssp -TSSCEEECSCTTCHH
T ss_pred -CCCEEEEECCccchh
Confidence 257999999996653
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.00 E-value=0.0012 Score=60.99 Aligned_cols=58 Identities=22% Similarity=0.280 Sum_probs=46.4
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANN 158 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~ 158 (428)
.+.+.+.+... .++..|||..||+|..+..+++.|. +++|+|++ ..++.|+++++.++
T Consensus 200 ~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcc
Confidence 44444444433 6889999999999999999999876 99999999 89999999987654
No 301
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.99 E-value=0.00037 Score=64.74 Aligned_cols=108 Identities=15% Similarity=0.018 Sum_probs=76.7
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-c--
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-V-- 173 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-l-- 173 (428)
..|.+.|... .+..+||+=+|||.+++.+.+. .++++.+|.+ ..+...++++.. .+++++++.|... +
T Consensus 81 ~~yf~~l~~~----n~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~ 152 (283)
T 2oo3_A 81 LEYISVIKQI----NLNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNA 152 (283)
T ss_dssp HHHHHHHHHH----SSSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHH
T ss_pred HHHHHHHHHh----cCCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHH
Confidence 3566666552 3556899999999999999984 5899999999 777666666543 3579999999644 2
Q ss_pred --cCCCceeEEEEecchhhhcchhhHHHHHHHHhc--ccccCeEEEc
Q 014247 174 --EIDEEVDVIISEWMGYMLLYESMLGSVITARDR--WLKRGGLILP 216 (428)
Q Consensus 174 --~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~--~LkpgG~lv~ 216 (428)
+...+||+|+..+. +....+...++..+.+ .+.|+|++++
T Consensus 153 l~~~~~~fdLVfiDPP---Ye~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 153 LLPPPEKRGLIFIDPS---YERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp HCSCTTSCEEEEECCC---CCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred hcCCCCCccEEEECCC---CCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 22357999999872 2222345566655543 5678998874
No 302
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.88 E-value=0.0031 Score=59.87 Aligned_cols=80 Identities=16% Similarity=0.231 Sum_probs=62.2
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-C-CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-G-AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--- 175 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--- 175 (428)
+.+.+.+...+|..++|..||.|..+..+++. + ..+|+|+|.+ .+++.|+ ++ ..+++++++++..++..
T Consensus 47 ~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~ 121 (347)
T 3tka_A 47 DEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVA 121 (347)
T ss_dssp HHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHH
T ss_pred HHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHH
Confidence 34455566788999999999999999999986 3 4599999999 7887774 32 24689999999887632
Q ss_pred ----CCceeEEEEec
Q 014247 176 ----DEEVDVIISEW 186 (428)
Q Consensus 176 ----~~~~DlVvs~~ 186 (428)
.+++|.|+.++
T Consensus 122 ~~g~~~~vDgILfDL 136 (347)
T 3tka_A 122 ERDLIGKIDGILLDL 136 (347)
T ss_dssp HTTCTTCEEEEEEEC
T ss_pred hcCCCCcccEEEECC
Confidence 13699999875
No 303
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.67 E-value=0.0077 Score=57.75 Aligned_cols=119 Identities=18% Similarity=0.195 Sum_probs=81.4
Q ss_pred hhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCC---------------
Q 014247 95 VRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANN--------------- 158 (428)
Q Consensus 95 ~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~--------------- 158 (428)
.|...+.+.+.+.+...+...|+.+|||.......+... +..+++-||..++++.-++.+...+
T Consensus 80 ~Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~ 159 (334)
T 1rjd_A 80 LRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAK 159 (334)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCC
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccc
Confidence 455555566555543345679999999999999888874 2236666776666666666666542
Q ss_pred -----CCCcEEEEEccccccc----------CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEE
Q 014247 159 -----LTDKVIVLHGRVEDVE----------IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 159 -----~~~~v~~~~~d~~~l~----------~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
..++..++.+|+.+.. .+....+++++.+..++. ......+++.+...+ |+|.++
T Consensus 160 ~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~-~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 160 SPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMH-NNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp TTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSC-HHHHHHHHHHHHHHC-SSEEEE
T ss_pred cccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCC-HHHHHHHHHHHHhhC-CCcEEE
Confidence 1357899999988731 125678999998654443 445888888888766 777665
No 304
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.38 E-value=0.02 Score=53.82 Aligned_cols=129 Identities=11% Similarity=0.087 Sum_probs=75.9
Q ss_pred CCCEEEEEcCCCcHHHHHHHH----cCC-C--eEEEEeCh----------HHHHHHHHHHHHCC-C-CC--cEEEEEccc
Q 014247 112 EGKVVVDVGCGTGILSIFCAQ----AGA-K--RVYAVDAS----------DIAVQANEVVKANN-L-TD--KVIVLHGRV 170 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~----~g~-~--~V~giD~s----------~~~~~a~~~~~~~~-~-~~--~v~~~~~d~ 170 (428)
+.-+|||+|-|+|...+.+.+ .+. . +++++|.. .............. + .+ .++++.+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 346899999999986544332 222 2 56677741 11122222222211 0 11 356788898
Q ss_pred ccc-c-CC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeeeEeecCCccchhhhhhhhhccCCCCc
Q 014247 171 EDV-E-ID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLYMAPVTHPDRYSESIDFWRNVYGIDM 247 (428)
Q Consensus 171 ~~l-~-~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (428)
.+. + ++ .+||+|+-..++-.-..+---+.+++.++++++|||+++--+ ..
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt---------------------------aa 228 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS---------------------------SS 228 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC---------------------------CC
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe---------------------------Cc
Confidence 663 2 23 479999987643222222224688999999999999987211 11
Q ss_pred chhHHHHHhcCCCCceEEee
Q 014247 248 SAMMPLAKQCAFEEPSVETI 267 (428)
Q Consensus 248 ~~l~~~l~~~Gf~~~~~~~~ 267 (428)
..++..|.++||.+..+.-+
T Consensus 229 g~VRR~L~~aGF~V~k~~G~ 248 (308)
T 3vyw_A 229 LSVRKSLLTLGFKVGSSREI 248 (308)
T ss_dssp HHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHCCCEEEecCCC
Confidence 34677789999986554433
No 305
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.24 E-value=0.0026 Score=61.88 Aligned_cols=96 Identities=21% Similarity=0.272 Sum_probs=62.7
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc----cc--CC
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED----VE--ID 176 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~----l~--~~ 176 (428)
+.....++++||-+|+|. |.++..+|+. |+++|+++|.+ +..+.+++. |.. .++..+-.+ +. ..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~~~~ 256 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT---HVINSKTQDPVAAIKEITD 256 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHTT
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC---EEecCCccCHHHHHHHhcC
Confidence 445567899999999986 7777777775 88789999998 766666543 321 223221111 10 11
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+.+|+|+-.. + ....+....+.|+++|+++..
T Consensus 257 gg~D~vid~~-g--------~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 257 GGVNFALEST-G--------SPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp SCEEEEEECS-C--------CHHHHHHHHHTEEEEEEEEEC
T ss_pred CCCcEEEECC-C--------CHHHHHHHHHHHhcCCEEEEe
Confidence 3799998643 1 123456677899999998754
No 306
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.10 E-value=0.01 Score=56.67 Aligned_cols=67 Identities=16% Similarity=0.229 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC--CceeEEEEec
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID--EEVDVIISEW 186 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~--~~~DlVvs~~ 186 (428)
.+.+|||+.||.|.+++.+.++|++.|.++|++ ..++..+.+.... . ++|+.++... ..+|+|+..+
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhhCCCCCEEEECC
Confidence 457999999999999999999999889999999 6666666664221 1 6888876532 4699999865
No 307
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.95 E-value=0.0097 Score=58.03 Aligned_cols=68 Identities=24% Similarity=0.176 Sum_probs=53.5
Q ss_pred CEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---------CCceeEEE
Q 014247 114 KVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI---------DEEVDVII 183 (428)
Q Consensus 114 ~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~---------~~~~DlVv 183 (428)
.+|||+-||.|.+++-+.++|++.|.++|++ ..++..+.+. . ...++++|+.++.. ...+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~-----~-~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF-----P-RSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC-----T-TSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC-----C-CCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 5899999999999999999999888899999 6665555442 1 36788899988632 35799999
Q ss_pred Eecc
Q 014247 184 SEWM 187 (428)
Q Consensus 184 s~~~ 187 (428)
..+.
T Consensus 77 ggpP 80 (376)
T 3g7u_A 77 GGPP 80 (376)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 8653
No 308
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.93 E-value=0.0042 Score=59.84 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=53.3
Q ss_pred CEEEEEcCCCcHHHHHHHHcC--CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC----CceeEEEEec
Q 014247 114 KVVVDVGCGTGILSIFCAQAG--AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID----EEVDVIISEW 186 (428)
Q Consensus 114 ~~VLDiGcGtG~ls~~la~~g--~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~----~~~DlVvs~~ 186 (428)
.+|||+-||.|.+++.+.++| ++.|+++|++ ..++..+.+.. ...++++|+.++... ..+|+|+..+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 589999999999999999998 5689999999 77766666542 245778999887532 2699999865
Q ss_pred c
Q 014247 187 M 187 (428)
Q Consensus 187 ~ 187 (428)
.
T Consensus 77 P 77 (343)
T 1g55_A 77 P 77 (343)
T ss_dssp C
T ss_pred C
Confidence 3
No 309
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.92 E-value=0.021 Score=55.99 Aligned_cols=102 Identities=18% Similarity=0.130 Sum_probs=63.1
Q ss_pred ccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc--------cC
Q 014247 107 NQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV--------EI 175 (428)
Q Consensus 107 ~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l--------~~ 175 (428)
.....+|.+||.+|||. |.++..+|+. |+.+|+++|.+ +.++.+++ .|. .++..+-.++ ..
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~~~~~~~ 251 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF----ETIDLRNSAPLRDQIDQILG 251 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC----EEEETTSSSCHHHHHHHHHS
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC----cEEcCCCcchHHHHHHHHhC
Confidence 34567899999999986 7788888875 87799999998 66655543 333 2332211111 11
Q ss_pred CCceeEEEEecchhhhc-c-----hhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLL-Y-----ESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~-~-----~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...+|+|+-.. +.... + .......+....++|++||+++..
T Consensus 252 g~g~Dvvid~~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 252 KPEVDCGVDAV-GFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SSCEEEEEECS-CTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCCEEEECC-CCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 13699999743 11100 0 001223566677889999998754
No 310
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.90 E-value=0.02 Score=56.45 Aligned_cols=62 Identities=15% Similarity=0.175 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCCCcHHHHHHH-Hc-C-CCeEEEEeCh-HHHHHHHHHHHH--CCCC-CcEEEEEccccc
Q 014247 111 IEGKVVVDVGCGTGILSIFCA-QA-G-AKRVYAVDAS-DIAVQANEVVKA--NNLT-DKVIVLHGRVED 172 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la-~~-g-~~~V~giD~s-~~~~~a~~~~~~--~~~~-~~v~~~~~d~~~ 172 (428)
.++.+|+||||+.|..+..++ +. + ..+|+++|++ ...+..++++.. |+.. .++++++.-+.+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 578999999999999999888 44 3 3699999999 888889998887 4433 678888776554
No 311
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=95.66 E-value=0.086 Score=49.84 Aligned_cols=122 Identities=11% Similarity=0.024 Sum_probs=83.0
Q ss_pred hhHHHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHHHHHHHHHCC--CCCcEEEEEccccc
Q 014247 95 VRTETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQANEVVKANN--LTDKVIVLHGRVED 172 (428)
Q Consensus 95 ~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~a~~~~~~~~--~~~~v~~~~~d~~~ 172 (428)
.|...+.+.+...+... ...|++||||-=.....+......+|+-||...+++..++.+...+ ...+..++.+|+.+
T Consensus 86 ~Rt~~~d~~v~~~~~~g-~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 86 VRTNFFDTYFNNAVIDG-IRQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp HHHHHHHHHHHHHHHTT-CCEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHHhC-CCeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 45555555665554322 2579999999876665554221247888886677888788877543 24578999999876
Q ss_pred ccC----------CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 173 VEI----------DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 173 l~~----------~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
.. ....-+++++.+.+++.. .....+++.+...+.||+.+++...
T Consensus 165 -~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~-~~~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 165 -DWPPALRSAGFDPSARTAWLAEGLLMYLPA-TAQDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp -CHHHHHHHTTCCTTSCEEEEECSCGGGSCH-HHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred -hHHHHHHhccCCCCCCEEEEEechHhhCCH-HHHHHHHHHHHHhCCCCeEEEEEec
Confidence 21 134557888876555544 4588899999998899999987654
No 312
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.40 E-value=0.024 Score=54.64 Aligned_cols=94 Identities=27% Similarity=0.330 Sum_probs=60.2
Q ss_pred cCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc---ccc----cc--C
Q 014247 108 QSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR---VED----VE--I 175 (428)
Q Consensus 108 ~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d---~~~----l~--~ 175 (428)
....+|.+||-+|+|. |.++..+|+. |+++|+++|.+ +-.+.+++ .|.. .++..+ ..+ +. .
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHHh
Confidence 4567899999999875 7777777775 77789999998 66655543 3432 223221 111 10 0
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...+|+|+-.. + . ...+....++|+++|+++..
T Consensus 240 ~~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 240 GCKPEVTIECT-G----A----EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp TSCCSEEEECS-C----C----HHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCCEEEECC-C----C----hHHHHHHHHHhcCCCEEEEE
Confidence 14699999642 1 1 22355666789999998854
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.33 E-value=0.058 Score=52.27 Aligned_cols=96 Identities=26% Similarity=0.358 Sum_probs=61.6
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEE---ccccc-c-----
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLH---GRVED-V----- 173 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~---~d~~~-l----- 173 (428)
+.....+|.+||-+|+|. |.++..+|++ |+++|+++|.+ +-.+.+++. |.. .++. .|..+ +
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~i~~~~~ 248 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT---ATVDPSAGDVVEAIAGPVG 248 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTSSCHHHHHHSTTS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEECCCCcCHHHHHHhhhh
Confidence 334567899999999875 6677777775 88799999999 666655543 332 2222 12111 1
Q ss_pred cCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 174 EIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 174 ~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...+.+|+|+-.. + -...+....++|++||+++..
T Consensus 249 ~~~gg~Dvvid~~-G--------~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 249 LVPGGVDVVIECA-G--------VAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp SSTTCEEEEEECS-C--------CHHHHHHHHHHEEEEEEEEEC
T ss_pred ccCCCCCEEEECC-C--------CHHHHHHHHHHhccCCEEEEE
Confidence 1124799999632 1 123456677889999998854
No 314
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.33 E-value=0.047 Score=53.38 Aligned_cols=101 Identities=19% Similarity=0.193 Sum_probs=63.6
Q ss_pred cCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccc-----ccc---cCC
Q 014247 108 QSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRV-----EDV---EID 176 (428)
Q Consensus 108 ~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~-----~~l---~~~ 176 (428)
....+|.+||-+|||. |.++..+|+. |+++|+++|.+ +-++.+++ .|. .++...- ..+ ...
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF----EIADLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC----EEEETTSSSCHHHHHHHHHSS
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC----cEEccCCcchHHHHHHHHhCC
Confidence 4567899999999875 7778788875 88789999999 66666643 343 2232111 111 112
Q ss_pred CceeEEEEecchhhh-------cchhhHHHHHHHHhcccccCeEEEcc
Q 014247 177 EEVDVIISEWMGYML-------LYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l-------~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
..+|+|+-.. +... .+..+....+....++|++||+++..
T Consensus 253 ~g~Dvvid~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 253 PEVDCAVDAV-GFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SCEEEEEECC-CTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECC-CCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 4799999743 2110 01112334567777899999998754
No 315
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.28 E-value=0.037 Score=53.40 Aligned_cols=97 Identities=23% Similarity=0.202 Sum_probs=62.4
Q ss_pred ccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEE-----cccc----ccc
Q 014247 107 NQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLH-----GRVE----DVE 174 (428)
Q Consensus 107 ~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~-----~d~~----~l~ 174 (428)
.....+|++||-+|+|. |.++..+|+. |+++|+++|.+ +-.+.+++. .. ..+.+.. .|+. ++.
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP----EVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT----TCEEEECCSCCHHHHHHHHHHHT
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch----hcccccccccchHHHHHHHHHHh
Confidence 34567899999999875 6777777776 88679999999 777777664 21 1122221 1111 111
Q ss_pred CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 ~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
....+|+|+-.. . -...+....++|++||+++..
T Consensus 249 ~g~g~Dvvid~~-----g----~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 249 GGIEPAVALECT-----G----VESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp SSCCCSEEEECS-----C----CHHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCCCEEEECC-----C----ChHHHHHHHHHhcCCCEEEEE
Confidence 235799999643 1 123455667789999998854
No 316
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.27 E-value=0.017 Score=56.85 Aligned_cols=98 Identities=15% Similarity=0.074 Sum_probs=60.2
Q ss_pred CCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------ccCCCc
Q 014247 109 SFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-------VEIDEE 178 (428)
Q Consensus 109 ~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------l~~~~~ 178 (428)
...+|.+||-+|+|. |.++..+|+. |+.+|+++|.+ .-.+.+++. |.. .++..+-.+ +.....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GAD---HVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEEcCCCCCHHHHHHHHhCCCC
Confidence 467899999999864 6667777775 88799999998 666666543 321 223221111 111247
Q ss_pred eeEEEEecchhhhcch-hhHHHHHHHHhcccccCeEEEccC
Q 014247 179 VDVIISEWMGYMLLYE-SMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+|+|+-.. ... .....+++.+.+.++++|+++...
T Consensus 283 ~D~vid~~-----g~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 283 AKLFLEAT-----GVPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CSEEEECS-----SCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCEEEECC-----CCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 99999632 111 123444444445669999988643
No 317
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.26 E-value=0.006 Score=58.83 Aligned_cols=96 Identities=22% Similarity=0.217 Sum_probs=61.8
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------ccC
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-------VEI 175 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------l~~ 175 (428)
+.....+|.+||-+|+|. |.++..+|+. |+.+|+++|.+ +-.+.+++. |.. .++..+-.+ +..
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~t~ 232 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GAT---DIINYKNGDIVEQILKATD 232 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TCC---EEECGGGSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CCc---eEEcCCCcCHHHHHHHHcC
Confidence 345567899999999875 7777778876 77789999998 666666543 332 223221111 111
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...+|+|+-.. .. ...+....+.|++||+++..
T Consensus 233 g~g~D~v~d~~-----g~----~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 233 GKGVDKVVIAG-----GD----VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp TCCEEEEEECS-----SC----TTHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECC-----CC----hHHHHHHHHHHhcCCEEEEe
Confidence 24699999632 11 13455666789999998854
No 318
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.18 E-value=0.052 Score=51.25 Aligned_cols=90 Identities=18% Similarity=0.105 Sum_probs=58.9
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEE
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVI 182 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlV 182 (428)
+.....+|.+||-+|+|. |.++..+|+. |+ +|++++ + +-.+.+++. |. -.++. |..++ ...+|+|
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l----Ga---~~v~~-d~~~v--~~g~Dvv 203 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR----GV---RHLYR-EPSQV--TQKYFAI 203 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH----TE---EEEES-SGGGC--CSCEEEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc----CC---CEEEc-CHHHh--CCCccEE
Confidence 555678899999999963 6777777776 88 999999 7 666666542 32 12232 43334 5789999
Q ss_pred EEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 183 ISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 183 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+-.. + .. . +....++|+++|+++..
T Consensus 204 ~d~~-g----~~----~-~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 204 FDAV-N----SQ----N-AAALVPSLKANGHIICI 228 (315)
T ss_dssp ECC-----------------TTGGGEEEEEEEEEE
T ss_pred EECC-C----ch----h-HHHHHHHhcCCCEEEEE
Confidence 8532 1 11 1 24557889999988754
No 319
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=95.06 E-value=0.68 Score=44.04 Aligned_cols=163 Identities=13% Similarity=0.156 Sum_probs=94.1
Q ss_pred hhHHHHHHHHHhccCCC-CCCEEEEEcCCCcHHHHHHHHcC--CCeEEEEeChHHHHHHHHHHHHCC-------------
Q 014247 95 VRTETYRAAIMQNQSFI-EGKVVVDVGCGTGILSIFCAQAG--AKRVYAVDASDIAVQANEVVKANN------------- 158 (428)
Q Consensus 95 ~r~~~~~~~i~~~~~~~-~~~~VLDiGcGtG~ls~~la~~g--~~~V~giD~s~~~~~a~~~~~~~~------------- 158 (428)
.|...+.+.+.+.+... +...|+-+|||.=.....+...+ ..+++=||..++++.=++.+...+
T Consensus 72 ~Rt~~iD~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~ 151 (334)
T 3iei_A 72 ARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSED 151 (334)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhccccccc
Confidence 45555556665555433 46799999999988887777642 236666666655554444444311
Q ss_pred ---------CCCcEEEEEccccccc----------C-CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 159 ---------LTDKVIVLHGRVEDVE----------I-DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 159 ---------~~~~v~~~~~d~~~l~----------~-~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
..++..++.+|+.+.. + +...-+++++.+..++ .......+++.+.... |+|.++.
T Consensus 152 ~~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL-~~~~~~~ll~~ia~~f-~~~~~i~-- 227 (334)
T 3iei_A 152 TLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYM-TPEQSANLLKWAANSF-ERAMFIN-- 227 (334)
T ss_dssp SCBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGS-CHHHHHHHHHHHHHHC-SSEEEEE--
T ss_pred ccccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCC-CHHHHHHHHHHHHHhC-CCceEEE--
Confidence 1456899999987631 1 2456689998865444 3455888888887765 4555543
Q ss_pred CeeeEeecCCccchhhh-hhhhh----ccCC----CCcchhHHHHHhcCCCCceEE
Q 014247 219 ATLYMAPVTHPDRYSES-IDFWR----NVYG----IDMSAMMPLAKQCAFEEPSVE 265 (428)
Q Consensus 219 ~~~~~~~~~~~~~~~~~-~~~~~----~~~~----~~~~~l~~~l~~~Gf~~~~~~ 265 (428)
..++...+.+... ..-+. ...+ .+.....+.+.++||..+.+.
T Consensus 228 ----yE~i~p~d~fg~~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~ 279 (334)
T 3iei_A 228 ----YEQVNMGDRFGQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAV 279 (334)
T ss_dssp ----EEECCTTSHHHHHHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEE
T ss_pred ----EeccCCCCHHHHHHHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceee
Confidence 1233222222111 01111 0112 234556778889999876544
No 320
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.94 E-value=0.21 Score=45.67 Aligned_cols=103 Identities=18% Similarity=0.253 Sum_probs=68.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc--------CCCeEEEEeCh-HH------------------------HHHHHHHHH--
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA--------GAKRVYAVDAS-DI------------------------AVQANEVVK-- 155 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~--------g~~~V~giD~s-~~------------------------~~~a~~~~~-- 155 (428)
.+| .|+|+||-.|..+..++.. ..++|+++|.- .+ .+..++.+.
T Consensus 69 vpG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 69 VPG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp SCS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 444 8999999999988776652 13699999921 11 111222211
Q ss_pred ----HCCC-CCcEEEEEccccccc------CC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 156 ----ANNL-TDKVIVLHGRVEDVE------ID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 156 ----~~~~-~~~v~~~~~d~~~l~------~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
..+. .++|+++.+++.+.- .+ .++|+|+... -. +. .....+..+..+|+|||++++...
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~---D~-Y~-~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL---DL-YE-PTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC---CC-HH-HHHHHHHHHGGGEEEEEEEEESST
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC---cc-cc-hHHHHHHHHHHHhCCCcEEEEcCC
Confidence 2233 478999999987631 12 5799999864 11 22 245678888899999999998764
No 321
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.78 E-value=0.051 Score=52.09 Aligned_cols=89 Identities=21% Similarity=0.181 Sum_probs=60.1
Q ss_pred CCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEe
Q 014247 109 SFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISE 185 (428)
Q Consensus 109 ~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~ 185 (428)
...+|.+||-+|+|. |.++..+|+. |+ +|++++.+ +-.+.+++ .|.. .++ .+...+. ..+|+|+-.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~v~-~~~~~~~--~~~D~vid~ 241 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS----MGVK---HFY-TDPKQCK--EELDFIIST 241 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH----TTCS---EEE-SSGGGCC--SCEEEEEEC
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh----cCCC---eec-CCHHHHh--cCCCEEEEC
Confidence 567899999999875 7777777775 77 89999998 66665543 3432 222 4443333 489999963
Q ss_pred cchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 186 WMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 186 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
. ... ..+....++|+++|+++..
T Consensus 242 ~-----g~~----~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 242 I-----PTH----YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp C-----CSC----CCHHHHHTTEEEEEEEEEC
T ss_pred C-----CcH----HHHHHHHHHHhcCCEEEEE
Confidence 2 111 1245566889999998854
No 322
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.70 E-value=0.071 Score=51.72 Aligned_cols=97 Identities=23% Similarity=0.273 Sum_probs=62.2
Q ss_pred HHhccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc-----cc----
Q 014247 104 IMQNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR-----VE---- 171 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d-----~~---- 171 (428)
+.+.....++.+||-+|+|. |.++..+|+. |+++|+++|.+ +-++.+++ .|.. .++... +.
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN---EFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC---EEECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---EEEccccCchhHHHHHH
Confidence 34445667899999999974 7777777776 88789999988 66665543 3432 222211 11
Q ss_pred cccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccC-eEEEcc
Q 014247 172 DVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRG-GLILPS 217 (428)
Q Consensus 172 ~l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 217 (428)
++. .+.+|+|+-.. + -...+....+.|++| |+++..
T Consensus 258 ~~~-~gg~D~vid~~-g--------~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 258 DLT-DGGVDYSFECI-G--------NVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHT-TSCBSEEEECS-C--------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred Hhc-CCCCCEEEECC-C--------CHHHHHHHHHHhhccCCEEEEE
Confidence 111 24799999632 1 123456677889996 988754
No 323
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.66 E-value=0.024 Score=49.57 Aligned_cols=94 Identities=20% Similarity=0.251 Sum_probs=56.7
Q ss_pred HHhccCCCCCCEEEEEcC--CCcHHHHHHHH-cCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc------
Q 014247 104 IMQNQSFIEGKVVVDVGC--GTGILSIFCAQ-AGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV------ 173 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGc--GtG~ls~~la~-~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l------ 173 (428)
+.+.....++++||..|+ |.|.....+++ .|+ +|+++|.+ +..+.+++ .+.. . ++ |..+.
T Consensus 30 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~--~-~~--d~~~~~~~~~~ 99 (198)
T 1pqw_A 30 LCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LGVE--Y-VG--DSRSVDFADEI 99 (198)
T ss_dssp HHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TCCS--E-EE--ETTCSTHHHHH
T ss_pred HHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCC--E-Ee--eCCcHHHHHHH
Confidence 334445678999999995 34555544444 477 89999998 65554432 3321 1 22 22111
Q ss_pred ---cCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 174 ---EIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 174 ---~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.....+|+|+.+. + . ..+....+.|++||+++.-
T Consensus 100 ~~~~~~~~~D~vi~~~-g-----~----~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 100 LELTDGYGVDVVLNSL-A-----G----EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp HHHTTTCCEEEEEECC-C-----T----HHHHHHHHTEEEEEEEEEC
T ss_pred HHHhCCCCCeEEEECC-c-----h----HHHHHHHHHhccCCEEEEE
Confidence 1124699999643 1 1 2456677889999988753
No 324
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.63 E-value=0.012 Score=56.29 Aligned_cols=96 Identities=17% Similarity=0.153 Sum_probs=59.3
Q ss_pred HHhccCCCCCCEEEEEcCC--CcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------
Q 014247 104 IMQNQSFIEGKVVVDVGCG--TGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED------- 172 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGcG--tG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~------- 172 (428)
+.+.....++++||-+|+| .|.++..+++. |+ +|++++.+ +-++.+++. +.. .++...-.+
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----ga~---~~~~~~~~~~~~~~~~ 207 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRL----GAA---YVIDTSTAPLYETVME 207 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH----TCS---EEEETTTSCHHHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhC----CCc---EEEeCCcccHHHHHHH
Confidence 3345567889999999997 46666666665 88 89999998 766666552 321 222211111
Q ss_pred ccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 173 VEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 173 l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+.....+|+|+... + .. .+.. ..+.|+++|+++..
T Consensus 208 ~~~~~g~Dvvid~~-g-----~~---~~~~-~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 208 LTNGIGADAAIDSI-G-----GP---DGNE-LAFSLRPNGHFLTI 242 (340)
T ss_dssp HTTTSCEEEEEESS-C-----HH---HHHH-HHHTEEEEEEEEEC
T ss_pred HhCCCCCcEEEECC-C-----Ch---hHHH-HHHHhcCCCEEEEE
Confidence 11124799999743 1 11 1222 33689999998854
No 325
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.58 E-value=0.046 Score=52.23 Aligned_cols=95 Identities=22% Similarity=0.189 Sum_probs=61.3
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc-----CCC
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE-----IDE 177 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~-----~~~ 177 (428)
......++++||-+|+|. |.++..+|+. |+ +|+++|.+ +..+.+++ .|.. .++..+-.++. ..+
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~~~g 231 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR----LGAE---VAVNARDTDPAAWLQKEIG 231 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHS
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH----cCCC---EEEeCCCcCHHHHHHHhCC
Confidence 334567899999999975 8888888886 77 99999999 66665543 3432 22222111110 013
Q ss_pred ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 178 EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.+|+|+-.. + -...++...+.|+++|+++..
T Consensus 232 ~~d~vid~~-g--------~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 232 GAHGVLVTA-V--------SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SEEEEEESS-C--------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEEeC-C--------CHHHHHHHHHHhccCCEEEEe
Confidence 689988632 1 123456677889999998854
No 326
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.53 E-value=0.0091 Score=57.86 Aligned_cols=94 Identities=21% Similarity=0.187 Sum_probs=60.1
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------ccC
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-------VEI 175 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------l~~ 175 (428)
+.....+|.+||-+|+|. |.++..+|+. |+ +|++++.+ +-++.+++. |.. .++..+..+ +..
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~~~ 254 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFAL----GAD---HGINRLEEDWVERVYALTG 254 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHHT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHc----CCC---EEEcCCcccHHHHHHHHhC
Confidence 445567899999999875 6677777775 77 89999998 766665543 332 223222111 111
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...+|+|+-.. + . . .+....+.|+++|+++..
T Consensus 255 g~g~D~vid~~-g----~-~----~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 255 DRGADHILEIA-G----G-A----GLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp TCCEEEEEEET-T----S-S----CHHHHHHHEEEEEEEEEE
T ss_pred CCCceEEEECC-C----h-H----HHHHHHHHhhcCCEEEEE
Confidence 24799999743 1 1 1 244556789999988754
No 327
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.33 E-value=0.0087 Score=71.82 Aligned_cols=101 Identities=17% Similarity=0.073 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-C-----CCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-c-CCCceeE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-G-----AKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-E-IDEEVDV 181 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-g-----~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~-~~~~~Dl 181 (428)
.+..+||+||.|+|..+..+.+. + ..+++..|+| .+.+.|+++++.. .++.-..|..+. . .+..||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeE
Confidence 35679999999999765544332 1 2378899999 7877777766542 133221232221 1 2367999
Q ss_pred EEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 182 IISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
|++.. .++...++...+..++++|||||.+++..
T Consensus 1315 via~~---vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1315 LVCNC---ALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EEEEC---C--------------------CCEEEEEE
T ss_pred EEEcc---cccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 99865 56656678889999999999999988643
No 328
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.32 E-value=0.011 Score=56.42 Aligned_cols=73 Identities=8% Similarity=0.068 Sum_probs=53.1
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC
Q 014247 99 TYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI 175 (428)
Q Consensus 99 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~ 175 (428)
.+.+.+.+.. ..+|..|||.-||+|..+..+.+.|. +.+|+|++ ..+..++++++..+.. ...+..|+.++..
T Consensus 240 ~l~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~i~~ 313 (323)
T 1boo_A 240 KLPEFFIRML-TEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYNRILN 313 (323)
T ss_dssp HHHHHHHHHH-CCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHHHHHT
T ss_pred HHHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHHHHHc
Confidence 3444444433 36889999999999999999999876 89999999 8888888887654432 4445555555543
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.29 E-value=0.13 Score=49.61 Aligned_cols=95 Identities=21% Similarity=0.216 Sum_probs=60.7
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc-----cc----cc
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR-----VE----DV 173 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d-----~~----~l 173 (428)
+.....++.+||-+|+|. |.++..+|+. |+.+|+++|.+ +-.+.+++ .|.. .++..+ +. ++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~ 257 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT---ECLNPKDYDKPIYEVICEK 257 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc---EEEecccccchHHHHHHHH
Confidence 445567899999999874 6677777775 88789999988 66655543 3432 222211 11 11
Q ss_pred cCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccC-eEEEcc
Q 014247 174 EIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRG-GLILPS 217 (428)
Q Consensus 174 ~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 217 (428)
. .+.+|+|+-.. + . ...+....++|+++ |+++..
T Consensus 258 t-~gg~Dvvid~~-g----~----~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 258 T-NGGVDYAVECA-G----R----IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp T-TSCBSEEEECS-C----C----HHHHHHHHHTBCTTTCEEEEC
T ss_pred h-CCCCCEEEECC-C----C----HHHHHHHHHHHhcCCCEEEEE
Confidence 1 14799999632 1 1 23456667889999 988753
No 330
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.16 E-value=0.18 Score=48.76 Aligned_cols=96 Identities=24% Similarity=0.329 Sum_probs=60.6
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc-----ccc-cc--
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR-----VED-VE-- 174 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d-----~~~-l~-- 174 (428)
+.....++.+||-+|+|. |.++..+|+. |+++|+++|.+ +-.+.+++. |.. .++... +.+ +.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~v~~~ 256 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GAT---ECINPQDFSKPIQEVLIEM 256 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCS---EEECGGGCSSCHHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc---eEeccccccccHHHHHHHH
Confidence 445567899999999874 6677777775 88789999988 666666542 332 222211 111 10
Q ss_pred CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccC-eEEEcc
Q 014247 175 IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRG-GLILPS 217 (428)
Q Consensus 175 ~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 217 (428)
..+.+|+|+-.. + . ...+....++|+++ |+++..
T Consensus 257 ~~~g~D~vid~~-g----~----~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 257 TDGGVDYSFECI-G----N----VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp TTSCBSEEEECS-C----C----HHHHHHHHHTBCTTTCEEEEC
T ss_pred hCCCCCEEEECC-C----c----HHHHHHHHHhhccCCcEEEEE
Confidence 114799998642 1 1 23456677889999 988754
No 331
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.05 E-value=0.056 Score=51.39 Aligned_cols=94 Identities=14% Similarity=0.153 Sum_probs=58.1
Q ss_pred HHhccCCCCCCEEEEEcC--CCcHHHHHHHH-cCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc---cc--
Q 014247 104 IMQNQSFIEGKVVVDVGC--GTGILSIFCAQ-AGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED---VE-- 174 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGc--GtG~ls~~la~-~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~---l~-- 174 (428)
+.+.....++++||..|| |.|..+..+++ .|+ +|+++|.+ +.++.+++ .+.. . ++ |..+ +.
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~--~-~~--d~~~~~~~~~~ 206 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQ----IGFD--A-AF--NYKTVNSLEEA 206 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS--E-EE--ETTSCSCHHHH
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCCc--E-EE--ecCCHHHHHHH
Confidence 334455678999999998 44555555555 477 89999998 66655532 2321 1 12 2221 10
Q ss_pred ----CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 ----IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 ----~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
..+.+|+|+.+. + . ..+....+.|++||+++.-
T Consensus 207 ~~~~~~~~~d~vi~~~-g-----~----~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 207 LKKASPDGYDCYFDNV-G-----G----EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HHHHCTTCEEEEEESS-C-----H----HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHhCCCCeEEEECC-C-----h----HHHHHHHHHHhcCCEEEEE
Confidence 114799998753 1 1 1356677889999988754
No 332
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.00 E-value=0.16 Score=49.19 Aligned_cols=96 Identities=21% Similarity=0.270 Sum_probs=60.4
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc-----ccc-cc--
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR-----VED-VE-- 174 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d-----~~~-l~-- 174 (428)
+.....++++||-+|+|. |.++..+|+. |+++|+++|.+ +-++.+++ .|.. .++... +.+ +.
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~ 258 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT---DFVNPNDHSEPISQVLSKM 258 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC---EEECGGGCSSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc---eEEeccccchhHHHHHHHH
Confidence 444567899999999874 6677777775 77789999988 66665543 3432 222211 111 00
Q ss_pred CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccC-eEEEcc
Q 014247 175 IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRG-GLILPS 217 (428)
Q Consensus 175 ~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 217 (428)
..+.+|+|+-.. + . ...+....++|+++ |+++..
T Consensus 259 ~~~g~D~vid~~-g----~----~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 259 TNGGVDFSLECV-G----N----VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HTSCBSEEEECS-C----C----HHHHHHHHHTBCTTTCEEEEC
T ss_pred hCCCCCEEEECC-C----C----HHHHHHHHHHhhcCCcEEEEE
Confidence 014799999642 1 1 23456677889999 988754
No 333
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.95 E-value=0.028 Score=53.99 Aligned_cols=95 Identities=25% Similarity=0.252 Sum_probs=59.0
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------ccC
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-------VEI 175 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------l~~ 175 (428)
..... ++++||-+|+|. |.++..+|+. |+++|++++.+ +-.+.+++. |.. .++..+-.+ +..
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GAD---YVINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHTT
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC---EEECCCCcCHHHHHHHHcC
Confidence 34456 899999999963 6666666665 77689999998 666665532 321 122211111 111
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...+|+|+... + ....+....+.|+++|+++.-
T Consensus 234 g~g~D~vid~~-g--------~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 234 GNGVDVFLEFS-G--------APKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp TSCEEEEEECS-C--------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECC-C--------CHHHHHHHHHHHhcCCEEEEE
Confidence 24699999743 1 123456667789999988754
No 334
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.94 E-value=0.055 Score=52.47 Aligned_cols=90 Identities=27% Similarity=0.251 Sum_probs=58.2
Q ss_pred CCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc----cccccCCCceeE
Q 014247 109 SFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR----VEDVEIDEEVDV 181 (428)
Q Consensus 109 ~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d----~~~l~~~~~~Dl 181 (428)
...+|.+||-+|+|. |.++..+|+. |+ +|++++.+ +.++.+++. |.. .++... +..+. ..+|+
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~--~g~Dv 260 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL----GAD---EVVNSRNADEMAAHL--KSFDF 260 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----TCS---EEEETTCHHHHHTTT--TCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCc---EEeccccHHHHHHhh--cCCCE
Confidence 567899999999975 6777777775 77 69999988 666666542 321 222211 11222 57999
Q ss_pred EEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 182 IISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
|+... + .. ..+....+.|+++|+++.-
T Consensus 261 vid~~-g----~~----~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 261 ILNTV-A----AP----HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEECC-S----SC----CCHHHHHTTEEEEEEEEEC
T ss_pred EEECC-C----CH----HHHHHHHHHhccCCEEEEe
Confidence 99643 1 11 1244566889999988753
No 335
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.86 E-value=0.17 Score=48.89 Aligned_cols=95 Identities=20% Similarity=0.282 Sum_probs=59.9
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc-----cc----cc
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR-----VE----DV 173 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d-----~~----~l 173 (428)
+.....++++||-+|+|. |.++..+|+. |+++|+++|.+ +..+.+++ .|.. .++..+ +. ++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~ 257 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT---ECVNPQDYKKPIQEVLTEM 257 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---eEecccccchhHHHHHHHH
Confidence 445567899999999875 6667777765 77789999988 66655543 3332 222211 11 11
Q ss_pred cCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccC-eEEEcc
Q 014247 174 EIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRG-GLILPS 217 (428)
Q Consensus 174 ~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 217 (428)
. .+.+|+|+-.. + . ...+....++|+++ |+++..
T Consensus 258 ~-~~g~D~vid~~-g----~----~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 258 S-NGGVDFSFEVI-G----R----LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp T-TSCBSEEEECS-C----C----HHHHHHHHHHBCTTTCEEEEC
T ss_pred h-CCCCcEEEECC-C----C----HHHHHHHHHHhhcCCcEEEEe
Confidence 1 14799998642 1 1 23456667789999 988753
No 336
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.83 E-value=0.11 Score=49.25 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=51.8
Q ss_pred CEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC--CceeEEEEec
Q 014247 114 KVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID--EEVDVIISEW 186 (428)
Q Consensus 114 ~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~--~~~DlVvs~~ 186 (428)
.+|||+=||.|.+++-+.++|++-|.++|++ ..++.-+.+. . -.++.+|+.++... ..+|+|+..+
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~-----~--~~~~~~DI~~i~~~~~~~~D~l~ggp 69 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH-----S--AKLIKGDISKISSDEFPKCDGIIGGP 69 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC-----C--SEEEESCGGGCCGGGSCCCSEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC-----C--CCcccCChhhCCHhhCCcccEEEecC
Confidence 4799999999999999999999888899999 5555544432 2 36788999987543 5799999854
No 337
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.82 E-value=0.17 Score=49.01 Aligned_cols=97 Identities=23% Similarity=0.277 Sum_probs=60.7
Q ss_pred HhccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc-----ccc-cc-
Q 014247 105 MQNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR-----VED-VE- 174 (428)
Q Consensus 105 ~~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d-----~~~-l~- 174 (428)
.+.....++++||-+|+|. |.++..+|+. |+++|+++|.+ +-.+.+++ .|.. .++..+ +.+ +.
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT---DCLNPRELDKPVQDVITE 260 (376)
T ss_dssp HTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---EEEccccccchHHHHHHH
Confidence 3445567899999999874 6677777775 77789999988 66655543 3432 222211 111 10
Q ss_pred -CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccC-eEEEcc
Q 014247 175 -IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRG-GLILPS 217 (428)
Q Consensus 175 -~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 217 (428)
..+.+|+|+-.. + . ...+....++|+++ |+++..
T Consensus 261 ~~~~g~Dvvid~~-G----~----~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 261 LTAGGVDYSLDCA-G----T----AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHTSCBSEEEESS-C----C----HHHHHHHHHTBCTTTCEEEEC
T ss_pred HhCCCccEEEECC-C----C----HHHHHHHHHHhhcCCCEEEEE
Confidence 014799998632 1 1 23456677889999 988754
No 338
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.76 E-value=0.076 Score=50.76 Aligned_cols=93 Identities=22% Similarity=0.191 Sum_probs=60.4
Q ss_pred CCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc--cc----cccCCCce
Q 014247 109 SFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR--VE----DVEIDEEV 179 (428)
Q Consensus 109 ~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d--~~----~l~~~~~~ 179 (428)
...++.+||-+|+|. |.++..+|++ |..+|+++|.+ +-.+.+++ .|.. .++..+ .. ++.....+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD---AAVKSGAGAADAIRELTGGQGA 240 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS---EEEECSTTHHHHHHHHHGGGCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC---EEEcCCCcHHHHHHHHhCCCCC
Confidence 457899999999975 7777777775 56699999999 66665544 3432 222211 11 11112479
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
|+|+-.. . -...+....+.|+++|+++..
T Consensus 241 d~v~d~~-----G----~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 241 TAVFDFV-----G----AQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEEESS-----C----CHHHHHHHHHHEEEEEEEEEC
T ss_pred eEEEECC-----C----CHHHHHHHHHHHhcCCEEEEE
Confidence 9999632 1 123556677889999998854
No 339
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.75 E-value=0.09 Score=50.42 Aligned_cols=94 Identities=22% Similarity=0.251 Sum_probs=58.6
Q ss_pred ccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc----c-ccc---cC
Q 014247 107 NQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR----V-EDV---EI 175 (428)
Q Consensus 107 ~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d----~-~~l---~~ 175 (428)
.....++++||-+|+|. |.++..+|+. |+ +|+++|.+ +..+.+++ .|.. .++..+ . ..+ ..
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHHHHHHHHhc
Confidence 34567899999999874 6677777775 77 59999998 66665543 3432 222211 1 111 10
Q ss_pred ---CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 ---DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ---~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...+|+|+... + . ...+....++|+++|+++..
T Consensus 235 ~~~g~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 235 SAIGDLPNVTIDCS-G----N----EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHSSSCCSEEEECS-C----C----HHHHHHHHHHSCTTCEEEEC
T ss_pred cccCCCCCEEEECC-C----C----HHHHHHHHHHHhcCCEEEEE
Confidence 24699999643 1 1 22455666789999998854
No 340
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.61 E-value=0.14 Score=47.97 Aligned_cols=70 Identities=16% Similarity=0.074 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHcCCCe--EEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC-----CceeEE
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQAGAKR--VYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID-----EEVDVI 182 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~g~~~--V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~-----~~~DlV 182 (428)
....+|+|+-||.|.+++-+.++|+.. |.++|++ ..++..+.+. . ...++.+|+.++... ..+|+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~-----~-~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH-----Q-GKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT-----T-TCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC-----C-CCceeCCChHHccHHHhcccCCcCEE
Confidence 456799999999999999999999875 7999999 5554444332 1 246788999887532 369999
Q ss_pred EEec
Q 014247 183 ISEW 186 (428)
Q Consensus 183 vs~~ 186 (428)
+...
T Consensus 88 ~ggp 91 (295)
T 2qrv_A 88 IGGS 91 (295)
T ss_dssp EECC
T ss_pred EecC
Confidence 9864
No 341
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.52 E-value=0.014 Score=56.04 Aligned_cols=92 Identities=23% Similarity=0.268 Sum_probs=57.4
Q ss_pred ccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc---c----cccccCC
Q 014247 107 NQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG---R----VEDVEID 176 (428)
Q Consensus 107 ~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~---d----~~~l~~~ 176 (428)
.... ++.+||-+|+|. |.++..+|+. |+++|++++.+ +-++.+++. .+ .++.. + +.++. .
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l------a~--~v~~~~~~~~~~~~~~~~-~ 229 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY------AD--RLVNPLEEDLLEVVRRVT-G 229 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT------CS--EEECTTTSCHHHHHHHHH-S
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh------HH--hccCcCccCHHHHHHHhc-C
Confidence 4456 899999999853 6666667765 77689999998 655554332 11 12221 1 11112 3
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
..+|+|+... + . ...++...+.|+++|+++.-
T Consensus 230 ~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 230 SGVEVLLEFS-G----N----EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SCEEEEEECS-C----C----HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECC-C----C----HHHHHHHHHHHhcCCEEEEE
Confidence 4799999643 1 1 23456667789999988754
No 342
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.49 E-value=0.11 Score=49.43 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=50.6
Q ss_pred CCEEEEEcCCCcHHHHHHHHcCC--CeE-EEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC----CceeEEEE
Q 014247 113 GKVVVDVGCGTGILSIFCAQAGA--KRV-YAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID----EEVDVIIS 184 (428)
Q Consensus 113 ~~~VLDiGcGtG~ls~~la~~g~--~~V-~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~----~~~DlVvs 184 (428)
..+|+|+-||.|.+++-+.++|. +.| .++|++ ..++..+.+... . ++++|+.++... ..+|+++.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~------~-~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE------E-VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC------C-CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC------C-cccCChhhcCHHHhccCCCCEEEe
Confidence 45899999999999999999984 677 899999 666555555421 1 567888877532 36999998
Q ss_pred ec
Q 014247 185 EW 186 (428)
Q Consensus 185 ~~ 186 (428)
.+
T Consensus 83 gp 84 (327)
T 3qv2_A 83 SP 84 (327)
T ss_dssp CC
T ss_pred cC
Confidence 65
No 343
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.48 E-value=0.023 Score=54.23 Aligned_cols=98 Identities=16% Similarity=0.172 Sum_probs=60.6
Q ss_pred HHHhccCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc----
Q 014247 103 AIMQNQSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE---- 174 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~---- 174 (428)
++.+.....++++||-.|+ |.|..+..+++. |+ +|++++.+ +-++.+. +..+.. .++...-.++.
T Consensus 140 al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~---~~~g~~---~~~~~~~~~~~~~~~ 212 (336)
T 4b7c_A 140 ALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLV---EELGFD---GAIDYKNEDLAAGLK 212 (336)
T ss_dssp HHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH---HTTCCS---EEEETTTSCHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH---HHcCCC---EEEECCCHHHHHHHH
Confidence 3435556788999999998 346666666665 77 99999998 6555542 222331 12221111110
Q ss_pred --CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 --IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 --~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
..+.+|+|+... +. ..+....+.|+++|+++..
T Consensus 213 ~~~~~~~d~vi~~~-g~---------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 213 RECPKGIDVFFDNV-GG---------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHCTTCEEEEEESS-CH---------HHHHHHHTTEEEEEEEEEC
T ss_pred HhcCCCceEEEECC-Cc---------chHHHHHHHHhhCCEEEEE
Confidence 125799998743 11 2466777899999998854
No 344
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.46 E-value=0.18 Score=48.87 Aligned_cols=95 Identities=26% Similarity=0.412 Sum_probs=59.1
Q ss_pred ccC-CCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc---ccc-------
Q 014247 107 NQS-FIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR---VED------- 172 (428)
Q Consensus 107 ~~~-~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d---~~~------- 172 (428)
... ..+|.+||-+|+|. |.++..+|+. |+.+|++++.+ +-.+.+++ .|.. .++..+ -.+
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~ 261 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMD 261 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHH
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHH
Confidence 345 67899999999763 6677777775 75699999998 66665543 3432 223222 111
Q ss_pred ccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 173 VEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 173 l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+.....+|+|+-.. + .. ..+....++|+++|+++.-
T Consensus 262 ~~~g~g~Dvvid~~-g----~~----~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 262 ITHGRGADFILEAT-G----DS----RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HTTTSCEEEEEECS-S----CT----THHHHHHHHEEEEEEEEEC
T ss_pred HhCCCCCcEEEECC-C----CH----HHHHHHHHHHhcCCEEEEE
Confidence 11123699999643 1 11 2345566789999988753
No 345
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=93.34 E-value=0.11 Score=54.68 Aligned_cols=106 Identities=14% Similarity=0.135 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCCCcHHHHHHHHc-----------CC--CeEEEEeC---h-HHHHHHH-----------HHHHHC-----
Q 014247 111 IEGKVVVDVGCGTGILSIFCAQA-----------GA--KRVYAVDA---S-DIAVQAN-----------EVVKAN----- 157 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~ls~~la~~-----------g~--~~V~giD~---s-~~~~~a~-----------~~~~~~----- 157 (428)
.+..+|||+|.|+|...+.+.+. .. -+++++|. + +.+..|. +.+...
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 34569999999999876665442 01 27899998 5 4443322 222221
Q ss_pred C-----CCC---cEEEEEcccccccC------CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 158 N-----LTD---KVIVLHGRVEDVEI------DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 158 ~-----~~~---~v~~~~~d~~~l~~------~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
+ +.+ .++++.+|+.+.-. ...+|+++...+.-....+---..++..+.++++|||.+..
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 1 111 57788889865321 36899999866322222222246788899999999998763
No 346
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.22 E-value=0.027 Score=53.55 Aligned_cols=96 Identities=19% Similarity=0.211 Sum_probs=59.9
Q ss_pred HHhccCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------
Q 014247 104 IMQNQSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED------- 172 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~------- 172 (428)
+.+.....++++||-.|+ |.|..+..+++. |+ +|++++.+ +-++.+++. |.. .++..+-.+
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~~~~ 203 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKAL----GAW---ETIDYSHEDVAKRVLE 203 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCC---EEEeCCCccHHHHHHH
Confidence 334445678999999983 346777777765 88 89999998 766666542 321 222221111
Q ss_pred ccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 173 VEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 173 l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
......+|+|+... + . ..+....+.|+++|+++..
T Consensus 204 ~~~~~g~Dvvid~~-g----~-----~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 204 LTDGKKCPVVYDGV-G----Q-----DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp HTTTCCEEEEEESS-C----G-----GGHHHHHTTEEEEEEEEEC
T ss_pred HhCCCCceEEEECC-C----h-----HHHHHHHHHhcCCCEEEEE
Confidence 11124799999743 1 1 2345567889999998854
No 347
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.11 E-value=0.021 Score=54.72 Aligned_cols=96 Identities=26% Similarity=0.284 Sum_probs=60.8
Q ss_pred HHHhccCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-----
Q 014247 103 AIMQNQSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV----- 173 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l----- 173 (428)
++.+.....++++||-.|+ |.|.++..+++. |+ +|++++.+ +-.+.+++. +.. .++..+ .++
T Consensus 150 ~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----ga~---~v~~~~-~~~~~~v~ 220 (342)
T 4eye_A 150 AYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSV----GAD---IVLPLE-EGWAKAVR 220 (342)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----TCS---EEEESS-TTHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCc---EEecCc-hhHHHHHH
Confidence 3334556678999999997 346777777775 77 89999998 666665542 321 223222 221
Q ss_pred --cCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 174 --EIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 174 --~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.....+|+|+... +. ..+....+.|+++|+++..
T Consensus 221 ~~~~~~g~Dvvid~~-g~---------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 221 EATGGAGVDMVVDPI-GG---------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp HHTTTSCEEEEEESC-C-----------CHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCceEEEECC-ch---------hHHHHHHHhhcCCCEEEEE
Confidence 1124799999743 11 1345566789999998854
No 348
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.86 E-value=0.56 Score=45.40 Aligned_cols=95 Identities=16% Similarity=0.174 Sum_probs=66.5
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCC-cEEEEEcccccccCCCceeEEEEecchh
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTD-KVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~-~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.+.+||.|+.+.|.++..++.. .++.+.-| -.....+.++..|++.+ .+++... .. ..+..||+|+..+
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~--~~~~~~~~v~~~l--- 108 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TA--DYPQQPGVVLIKV--- 108 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TS--CCCSSCSEEEEEC---
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-cc--ccccCCCEEEEEc---
Confidence 4467999999999999888764 44555445 33344667888898865 3666532 22 2347899999743
Q ss_pred hhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 190 MLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 190 ~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
-.....+...|..+...|++|+.++.
T Consensus 109 -pk~~~~l~~~L~~l~~~l~~~~~i~~ 134 (375)
T 4dcm_A 109 -PKTLALLEQQLRALRKVVTSDTRIIA 134 (375)
T ss_dssp -CSCHHHHHHHHHHHHTTCCTTSEEEE
T ss_pred -CCCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 23345577788899999999998864
No 349
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.74 E-value=0.027 Score=53.66 Aligned_cols=95 Identities=20% Similarity=0.223 Sum_probs=58.6
Q ss_pred HhccCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------c
Q 014247 105 MQNQSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-------V 173 (428)
Q Consensus 105 ~~~~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------l 173 (428)
.+.....++++||-+|+ |.|.++..+++. |+ +|++++.+ +-++.+++ .+.. .++..+-.+ .
T Consensus 141 ~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~ 212 (334)
T 3qwb_A 141 NEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE----YGAE---YLINASKEDILRQVLKF 212 (334)
T ss_dssp HTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHH
T ss_pred HHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCc---EEEeCCCchHHHHHHHH
Confidence 34445678999999995 346666666665 77 89999998 66655543 3321 222221111 1
Q ss_pred cCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 174 EIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 174 ~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.....+|+|+... +. ..+....+.|+++|+++..
T Consensus 213 ~~~~g~D~vid~~-g~---------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 213 TNGKGVDASFDSV-GK---------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp TTTSCEEEEEECC-GG---------GGHHHHHHHEEEEEEEEEC
T ss_pred hCCCCceEEEECC-Ch---------HHHHHHHHHhccCCEEEEE
Confidence 1135799999743 21 2345556789999988854
No 350
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.67 E-value=0.052 Score=52.19 Aligned_cols=97 Identities=18% Similarity=0.253 Sum_probs=57.9
Q ss_pred HHhccCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc------
Q 014247 104 IMQNQSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV------ 173 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l------ 173 (428)
+.+.....++++||-.|+ |.|..+..+++. |+ +|++++.+ +.++.+++ .+.. .++..+-.++
T Consensus 162 l~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~~~d~~~~~~~~~~~~ 233 (351)
T 1yb5_A 162 LIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQ----NGAH---EVFNHREVNYIDKIKK 233 (351)
T ss_dssp HHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS---EEEETTSTTHHHHHHH
T ss_pred HHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH----cCCC---EEEeCCCchHHHHHHH
Confidence 333445678999999997 345555555554 77 89999998 65554433 3322 1222111111
Q ss_pred -cCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 174 -EIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 174 -~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
.....+|+|+... +. ..+....++|+++|+++...
T Consensus 234 ~~~~~~~D~vi~~~-G~---------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 234 YVGEKGIDIIIEML-AN---------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHCTTCEEEEEESC-HH---------HHHHHHHHHEEEEEEEEECC
T ss_pred HcCCCCcEEEEECC-Ch---------HHHHHHHHhccCCCEEEEEe
Confidence 1123799999753 21 13455678899999987543
No 351
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.66 E-value=0.16 Score=48.72 Aligned_cols=85 Identities=19% Similarity=0.239 Sum_probs=54.1
Q ss_pred CEEEEEcCCC-cHHH-HHHH-Hc-CCCeEEEEeCh-H---HHHHHHHHHHHCCCCCcEEEEEc---c---cccccCCCce
Q 014247 114 KVVVDVGCGT-GILS-IFCA-QA-GAKRVYAVDAS-D---IAVQANEVVKANNLTDKVIVLHG---R---VEDVEIDEEV 179 (428)
Q Consensus 114 ~~VLDiGcGt-G~ls-~~la-~~-g~~~V~giD~s-~---~~~~a~~~~~~~~~~~~v~~~~~---d---~~~l~~~~~~ 179 (428)
.+||-+|+|. |.++ ..+| +. |+++|++++.+ + -.+.+++ .|. ..+.. | +.++ .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa----~~v~~~~~~~~~i~~~--~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDA----TYVDSRQTPVEDVPDV--YEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTC----EEEETTTSCGGGHHHH--SCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCC----cccCCCccCHHHHHHh--CCCC
Confidence 9999999854 6677 7777 65 78669999998 6 6666543 332 22211 1 1111 1379
Q ss_pred eEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 180 DVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
|+|+-.. + . ...+....++|+++|+++..
T Consensus 244 Dvvid~~-g----~----~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 244 DFIYEAT-G----F----PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp EEEEECS-C----C----HHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECC-C----C----hHHHHHHHHHHhcCCEEEEE
Confidence 9998632 1 1 12455667889999988754
No 352
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=92.60 E-value=0.11 Score=49.63 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=50.0
Q ss_pred CEEEEEcCCCcHHHHHHHHcCC--CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCC----CceeEEEEec
Q 014247 114 KVVVDVGCGTGILSIFCAQAGA--KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEID----EEVDVIISEW 186 (428)
Q Consensus 114 ~~VLDiGcGtG~ls~~la~~g~--~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~----~~~DlVvs~~ 186 (428)
.+++|+-||.|.+++-+.++|. +.|.++|++ ..++.-+.+.. ...++.+|+.++... ..+|+++..+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhccCCCCEEEecC
Confidence 4799999999999999998886 678899999 55544444421 135678899887542 3699999754
No 353
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.60 E-value=0.15 Score=48.68 Aligned_cols=96 Identities=23% Similarity=0.230 Sum_probs=59.0
Q ss_pred hccCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc---ccc----ccC
Q 014247 106 QNQSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR---VED----VEI 175 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d---~~~----l~~ 175 (428)
......++.+||-.|+|. |.++..+|++ |+..++++|.+ +-++.+++ .|.. .++... ..+ +..
T Consensus 154 ~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~---~~i~~~~~~~~~~~~~~~~ 226 (346)
T 4a2c_A 154 HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAM---QTFNSSEMSAPQMQSVLRE 226 (346)
T ss_dssp HHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHGG
T ss_pred HHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCe---EEEeCCCCCHHHHHHhhcc
Confidence 334567899999999975 4556666665 88788999998 66555543 3432 223221 111 111
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...+|+|+... + -...++...++|++||.++..
T Consensus 227 ~~g~d~v~d~~-G--------~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 227 LRFNQLILETA-G--------VPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp GCSSEEEEECS-C--------SHHHHHHHHHHCCTTCEEEEC
T ss_pred cCCcccccccc-c--------ccchhhhhhheecCCeEEEEE
Confidence 25678887532 1 123455666789999988754
No 354
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.58 E-value=0.068 Score=51.50 Aligned_cols=95 Identities=22% Similarity=0.224 Sum_probs=58.2
Q ss_pred cCCCCCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccc-cc--cCCCceeE
Q 014247 108 QSFIEGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVE-DV--EIDEEVDV 181 (428)
Q Consensus 108 ~~~~~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~-~l--~~~~~~Dl 181 (428)
....++.+||-+|+|. |.++..+|+. |+ +|++++.+ +-++.+++. |.. .++..+-. ++ ...+.+|+
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~---~v~~~~~~~~~~~~~~~~~D~ 246 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM----GAD---HYIATLEEGDWGEKYFDTFDL 246 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH----TCS---EEEEGGGTSCHHHHSCSCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc----CCC---EEEcCcCchHHHHHhhcCCCE
Confidence 4567899999999864 6667777765 78 79999988 666666542 321 22322111 11 01157999
Q ss_pred EEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 182 IISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
|+... +.. . ...+....++|+++|+++.-
T Consensus 247 vid~~-g~~--~----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 247 IVVCA-SSL--T----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEECC-SCS--T----TCCTTTGGGGEEEEEEEEEC
T ss_pred EEECC-CCC--c----HHHHHHHHHHhcCCCEEEEe
Confidence 99743 110 0 11234566789999988753
No 355
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.55 E-value=0.12 Score=49.33 Aligned_cols=87 Identities=22% Similarity=0.274 Sum_probs=55.2
Q ss_pred CCCEEEEEc-CC-CcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc------cccccCCCceeE
Q 014247 112 EGKVVVDVG-CG-TGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR------VEDVEIDEEVDV 181 (428)
Q Consensus 112 ~~~~VLDiG-cG-tG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d------~~~l~~~~~~Dl 181 (428)
++.+||-+| +| .|.++..+++. |+ +|++++.+ +-++.+++. |.. .++..+ +.++ ....+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~-~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM----GAD---IVLNHKESLLNQFKTQ-GIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH----TCS---EEECTTSCHHHHHHHH-TCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCc---EEEECCccHHHHHHHh-CCCCccE
Confidence 789999994 44 36677777765 77 89999998 666666552 321 122111 1111 1257999
Q ss_pred EEEecchhhhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 182 IISEWMGYMLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
|+... + -...+....++|+++|+++.
T Consensus 221 v~d~~-g--------~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 221 VFCTF-N--------TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp EEESS-C--------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEECC-C--------chHHHHHHHHHhccCCEEEE
Confidence 98632 1 23445666788999999864
No 356
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.35 E-value=0.1 Score=49.84 Aligned_cols=97 Identities=16% Similarity=0.092 Sum_probs=59.2
Q ss_pred HHhccCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc-cccccc----
Q 014247 104 IMQNQSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG-RVEDVE---- 174 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~-d~~~l~---- 174 (428)
+.+.....++++||-.|+ |.|..+..+++. |+ +|++++.+ +.++.+++ ..|.. .++.. +..++.
T Consensus 147 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~---~~g~~---~~~d~~~~~~~~~~~~ 219 (345)
T 2j3h_A 147 FYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKT---KFGFD---DAFNYKEESDLTAALK 219 (345)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH---TSCCS---EEEETTSCSCSHHHHH
T ss_pred HHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---HcCCc---eEEecCCHHHHHHHHH
Confidence 334456678999999997 456666666664 77 89999998 66555542 22321 12211 101110
Q ss_pred --CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 --IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 --~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
..+.+|+|+... + . ..+....+.|++||+++..
T Consensus 220 ~~~~~~~d~vi~~~-g--------~-~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 220 RCFPNGIDIYFENV-G--------G-KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HHCTTCEEEEEESS-C--------H-HHHHHHHTTEEEEEEEEEC
T ss_pred HHhCCCCcEEEECC-C--------H-HHHHHHHHHHhcCCEEEEE
Confidence 024699998743 1 1 2466677899999998753
No 357
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.33 E-value=0.1 Score=50.35 Aligned_cols=89 Identities=12% Similarity=0.065 Sum_probs=58.1
Q ss_pred CCCEEEEEc-CC-CcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc--c----cccccCCCceeE
Q 014247 112 EGKVVVDVG-CG-TGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG--R----VEDVEIDEEVDV 181 (428)
Q Consensus 112 ~~~~VLDiG-cG-tG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~--d----~~~l~~~~~~Dl 181 (428)
++.+||-+| +| .|.++..+|+. +..+|++++.+ +-.+.+++ .|.. .++.. + +.++ ..+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad---~vi~~~~~~~~~v~~~-~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH---HVIDHSKPLAAEVAAL-GLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS---EEECTTSCHHHHHHTT-CSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC---EEEeCCCCHHHHHHHh-cCCCceE
Confidence 788999998 54 47888888886 55599999998 66666543 3432 22211 1 1112 1257999
Q ss_pred EEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 182 IISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
|+-.. + -...+....++|+++|+++..
T Consensus 243 vid~~-g--------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTT-H--------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECS-C--------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECC-C--------chhhHHHHHHHhcCCCEEEEE
Confidence 98632 1 224456677889999998854
No 358
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.26 E-value=0.15 Score=48.75 Aligned_cols=90 Identities=20% Similarity=0.273 Sum_probs=57.3
Q ss_pred CCCCCCEEEEEcC--CCcHHHHHHHH-cCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccc---ccc------C
Q 014247 109 SFIEGKVVVDVGC--GTGILSIFCAQ-AGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVE---DVE------I 175 (428)
Q Consensus 109 ~~~~~~~VLDiGc--GtG~ls~~la~-~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~---~l~------~ 175 (428)
...++++||.+|+ |.|..+..+++ .|+ +|++++.+ +..+.+++ .+.. .++ |.. ++. .
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~----~g~~---~~~--d~~~~~~~~~~~~~~~ 235 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRS----IGGE---VFI--DFTKEKDIVGAVLKAT 235 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHH----TTCC---EEE--ETTTCSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHH----cCCc---eEE--ecCccHhHHHHHHHHh
Confidence 5678999999998 35666666665 477 89999988 65555543 2321 122 222 110 0
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.+.+|+|+... + ....++...+.|+++|+++.-
T Consensus 236 ~~~~D~vi~~~-g--------~~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 236 DGGAHGVINVS-V--------SEAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp TSCEEEEEECS-S--------CHHHHHHHTTSEEEEEEEEEC
T ss_pred CCCCCEEEECC-C--------cHHHHHHHHHHHhcCCEEEEE
Confidence 12699999753 1 123567778899999988753
No 359
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.16 E-value=0.17 Score=48.28 Aligned_cols=92 Identities=21% Similarity=0.205 Sum_probs=57.7
Q ss_pred cCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------ccCC
Q 014247 108 QSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-------VEID 176 (428)
Q Consensus 108 ~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------l~~~ 176 (428)
....++++||-+|+ |.|..+..+++. |+ +|++++.+ +.++.+++. +.. .++...-.+ ....
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~----ga~---~~~d~~~~~~~~~~~~~~~~ 233 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKAL----GAD---ETVNYTHPDWPKEVRRLTGG 233 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCS---EEEETTSTTHHHHHHHHTTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc----CCC---EEEcCCcccHHHHHHHHhCC
Confidence 35678999999998 567777777765 77 89999998 666666432 321 122211111 1112
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
..+|+|+... + . ..+....+.|+++|+++.-
T Consensus 234 ~~~d~vi~~~-g-----~----~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 234 KGADKVVDHT-G-----A----LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp TCEEEEEESS-C-----S----SSHHHHHHHEEEEEEEEES
T ss_pred CCceEEEECC-C-----H----HHHHHHHHhhccCCEEEEE
Confidence 4799999743 1 1 1245556788999988754
No 360
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.87 E-value=0.14 Score=49.31 Aligned_cols=94 Identities=19% Similarity=0.186 Sum_probs=59.2
Q ss_pred hccCCCCCCEEEEEc--CCCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc----c--C
Q 014247 106 QNQSFIEGKVVVDVG--CGTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV----E--I 175 (428)
Q Consensus 106 ~~~~~~~~~~VLDiG--cGtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l----~--~ 175 (428)
+.....++++||-+| .|.|..+..+++. |+ +|++++.+ +.++.+++ .|.. .++..+-.++ . .
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQEY 228 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHC
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHhc
Confidence 334567899999999 3467777777775 77 89999998 66665543 3332 2222111111 0 1
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...+|+|+... + . ..+....+.|+++|+++.-
T Consensus 229 ~~g~D~vid~~-g----~-----~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 229 PEGVDVVYESV-G----G-----AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp TTCEEEEEECS-C----T-----HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECC-C----H-----HHHHHHHHHHhcCCEEEEE
Confidence 24699999743 1 1 2456667889999988753
No 361
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.58 E-value=0.21 Score=47.61 Aligned_cols=90 Identities=21% Similarity=0.192 Sum_probs=57.0
Q ss_pred CCCCCCEEEEEcCC-CcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-------CCc
Q 014247 109 SFIEGKVVVDVGCG-TGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-------DEE 178 (428)
Q Consensus 109 ~~~~~~~VLDiGcG-tG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-------~~~ 178 (428)
...++++||-+|+| .|.++..+++. |+ +|++++.+ +-++.+++ .+.. .++ |..+... .+.
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~~--d~~~~~~~~~~~~~~~~ 230 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE----LGAD---LVV--NPLKEDAAKFMKEKVGG 230 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTCS---EEE--CTTTSCHHHHHHHHHSS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----CCCC---EEe--cCCCccHHHHHHHHhCC
Confidence 56789999999996 36666666665 77 99999998 66665543 3332 122 2211100 046
Q ss_pred eeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 179 VDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+|+|+... + . ...++...++|+++|+++.-
T Consensus 231 ~d~vid~~-g----~----~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 231 VHAAVVTA-V----S----KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EEEEEESS-C----C----HHHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECC-C----C----HHHHHHHHHHhhcCCEEEEe
Confidence 99998643 1 1 23456667789999988753
No 362
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.44 E-value=0.041 Score=52.94 Aligned_cols=93 Identities=27% Similarity=0.304 Sum_probs=57.9
Q ss_pred hccCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------cc
Q 014247 106 QNQSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-------VE 174 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------l~ 174 (428)
+.....++++||-+|+ |.|.++..+++. |+ +|++++.+ +-++.+++. +.. .++..+-.+ ..
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~---~~~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERL----GAK---RGINYRSEDFAAVIKAET 232 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCC---EEEeCCchHHHHHHHHHh
Confidence 4455678999999953 346666666665 77 89999998 766666542 321 222211111 11
Q ss_pred CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 ~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...+|+|+... +. . .+....+.|+++|+++..
T Consensus 233 -~~g~Dvvid~~-g~-----~----~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 233 -GQGVDIILDMI-GA-----A----YFERNIASLAKDGCLSII 264 (353)
T ss_dssp -SSCEEEEEESC-CG-----G----GHHHHHHTEEEEEEEEEC
T ss_pred -CCCceEEEECC-CH-----H----HHHHHHHHhccCCEEEEE
Confidence 35799999743 21 1 345566789999988754
No 363
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.41 E-value=0.055 Score=51.30 Aligned_cols=93 Identities=19% Similarity=0.224 Sum_probs=56.4
Q ss_pred ccCCCCCCEEEEEcC--CCcHHHHHHHH-cCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------ccC
Q 014247 107 NQSFIEGKVVVDVGC--GTGILSIFCAQ-AGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-------VEI 175 (428)
Q Consensus 107 ~~~~~~~~~VLDiGc--GtG~ls~~la~-~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------l~~ 175 (428)
.....++++||-.|+ |.|..+..+++ .|+ +|++++.+ +.++.+++. +.. .++..+-.+ ...
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~~ 206 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA----GAW---QVINYREEDLVERLKEITG 206 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHTT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CCC---EEEECCCccHHHHHHHHhC
Confidence 445678999999994 34555555555 487 89999998 666665542 221 122211111 111
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...+|+|+.+. + . ..++...++|+++|+++.-
T Consensus 207 ~~~~D~vi~~~-g-----~----~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 207 GKKVRVVYDSV-G-----R----DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp TCCEEEEEECS-C-----G----GGHHHHHHTEEEEEEEEEC
T ss_pred CCCceEEEECC-c-----h----HHHHHHHHHhcCCCEEEEE
Confidence 24699999753 1 1 2345666789999988753
No 364
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.68 E-value=0.12 Score=48.24 Aligned_cols=89 Identities=15% Similarity=0.078 Sum_probs=56.0
Q ss_pred CCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccc-ccccC-CCceeEEE
Q 014247 110 FIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRV-EDVEI-DEEVDVII 183 (428)
Q Consensus 110 ~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~-~~l~~-~~~~DlVv 183 (428)
..++++||-+|+ |.|.++..+++. |+ +|++++.+ +..+.+++ .|.. .++..+- .++.. -..+|+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~~d~vi 194 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAWGGLDLVL 194 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHTTSEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHhcCceEEE
Confidence 578999999998 356677677665 77 89999998 65555533 3332 2222111 11100 05799998
Q ss_pred EecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 184 SEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 184 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
. . +. ..+....+.|+++|+++..
T Consensus 195 d-~-g~---------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 195 E-V-RG---------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp E-C-SC---------TTHHHHHTTEEEEEEEEEC
T ss_pred E-C-CH---------HHHHHHHHhhccCCEEEEE
Confidence 6 4 21 1345667889999988753
No 365
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=90.62 E-value=0.45 Score=45.59 Aligned_cols=102 Identities=21% Similarity=0.235 Sum_probs=55.8
Q ss_pred HHHhccCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEc------ccccc
Q 014247 103 AIMQNQSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHG------RVEDV 173 (428)
Q Consensus 103 ~i~~~~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~------d~~~l 173 (428)
++.......+|.+||-+|+ |.|.++..+|+. |++.|..++.++.....++.++..|.. .++.. ++.++
T Consensus 158 ~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~ 234 (357)
T 1zsy_A 158 MLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAE---HVITEEELRRPEMKNF 234 (357)
T ss_dssp HHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCS---EEEEHHHHHSGGGGGT
T ss_pred HHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCc---EEEecCcchHHHHHHH
Confidence 3334456678999999997 457788888876 885555555542111112233344432 22322 12222
Q ss_pred cCC-CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 174 EID-EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 174 ~~~-~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
... ..+|+|+-.. + . . .+ ....++|+++|+++..
T Consensus 235 ~~~~~~~Dvvid~~-g----~-~---~~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 235 FKDMPQPRLALNCV-G----G-K---SS-TELLRQLARGGTMVTY 269 (357)
T ss_dssp TSSSCCCSEEEESS-C----H-H---HH-HHHHTTSCTTCEEEEC
T ss_pred HhCCCCceEEEECC-C----c-H---HH-HHHHHhhCCCCEEEEE
Confidence 111 2599998632 1 1 1 12 2356889999998754
No 366
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.55 E-value=0.42 Score=45.47 Aligned_cols=91 Identities=18% Similarity=0.169 Sum_probs=57.4
Q ss_pred CCCCCCEEEEEcCCC-cHHHHHHHHc---CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc----c-cccccCCCc
Q 014247 109 SFIEGKVVVDVGCGT-GILSIFCAQA---GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG----R-VEDVEIDEE 178 (428)
Q Consensus 109 ~~~~~~~VLDiGcGt-G~ls~~la~~---g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~----d-~~~l~~~~~ 178 (428)
.. ++.+||-+|+|. |.++..+|+. |+ +|++++.+ +-.+.+++. |.. .++.. + +.++.....
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL----GAD---YVSEMKDAESLINKLTDGLG 238 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH----TCS---EEECHHHHHHHHHHHHTTCC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh----CCC---EEeccccchHHHHHhhcCCC
Confidence 55 899999999974 6666666664 66 79999998 666666542 321 22221 1 111221237
Q ss_pred eeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 179 VDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+|+|+... + . ...+....++|+++|+++..
T Consensus 239 ~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 239 ASIAIDLV-G----T----EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEEESS-C----C----HHHHHHHHHHEEEEEEEEEC
T ss_pred ccEEEECC-C----C----hHHHHHHHHHhhcCCEEEEe
Confidence 99999743 1 1 23456667889999988753
No 367
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.50 E-value=0.89 Score=47.59 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=65.5
Q ss_pred CCCEEEEEcCCCcHHHHHHHHc-----------CC--CeEEEEeC---h-HHHHHHH-----------HHHHHCCC----
Q 014247 112 EGKVVVDVGCGTGILSIFCAQA-----------GA--KRVYAVDA---S-DIAVQAN-----------EVVKANNL---- 159 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~-----------g~--~~V~giD~---s-~~~~~a~-----------~~~~~~~~---- 159 (428)
+.-+|||+|-|+|...+.+.+. .. -+++++|. + +.+..+. +.......
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 4469999999999876655442 01 16899998 6 5554322 22222211
Q ss_pred ---------CCcEEEEEcccccccC------CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 160 ---------TDKVIVLHGRVEDVEI------DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 160 ---------~~~v~~~~~d~~~l~~------~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.-.+++..+|+.+.-. ...||+|+...+......+---..+++.+.++++|||.+...
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 0135667777765311 267999998764332222222467889999999999998743
No 368
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.44 E-value=0.16 Score=48.36 Aligned_cols=98 Identities=18% Similarity=0.021 Sum_probs=57.0
Q ss_pred cCCCCCCEEEEEcCCCc-HHHHHHHH-cCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccc----cccCCCcee
Q 014247 108 QSFIEGKVVVDVGCGTG-ILSIFCAQ-AGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVE----DVEIDEEVD 180 (428)
Q Consensus 108 ~~~~~~~~VLDiGcGtG-~ls~~la~-~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~----~l~~~~~~D 180 (428)
....+|++||-+|+|.+ .++..+++ .+..+|+++|.+ +-++.+++ .+...-+..-..|.. ++.....+|
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhcCCCCce
Confidence 34578999999999864 44444444 566699999999 65554433 343221222222221 112224577
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
+++.... -...+....+.|+++|+++...
T Consensus 235 ~~~~~~~---------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 235 SAIVCAV---------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEECCS---------CHHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEecc---------CcchhheeheeecCCceEEEEe
Confidence 7775321 1234556678899999887543
No 369
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.35 E-value=0.43 Score=45.46 Aligned_cols=93 Identities=19% Similarity=0.287 Sum_probs=57.4
Q ss_pred cCCCCCCEEEEEcCCC--cHHHHHHHH-c-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc-c------cccccC
Q 014247 108 QSFIEGKVVVDVGCGT--GILSIFCAQ-A-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG-R------VEDVEI 175 (428)
Q Consensus 108 ~~~~~~~~VLDiGcGt--G~ls~~la~-~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~-d------~~~l~~ 175 (428)
....++++||-.|+|. |..+..+++ . |+ +|+++|.+ +..+.+++. +.. .++.. + +.++..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~~ 237 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA----GAD---YVINASMQDPLAEIRRITE 237 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh----CCC---EEecCCCccHHHHHHHHhc
Confidence 4567899999999984 445544544 4 77 89999998 666665432 321 12221 1 111111
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.+.+|+|+... + ....++...++|+++|+++.-
T Consensus 238 ~~~~d~vi~~~-g--------~~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 238 SKGVDAVIDLN-N--------SEKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TSCEEEEEESC-C--------CHHHHTTGGGGEEEEEEEEEC
T ss_pred CCCceEEEECC-C--------CHHHHHHHHHHHhcCCEEEEE
Confidence 14799999743 1 123466677899999988753
No 370
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.25 E-value=0.2 Score=48.08 Aligned_cols=96 Identities=16% Similarity=0.233 Sum_probs=57.5
Q ss_pred hccCCCCC--CEEEEEcCC--CcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc----c-
Q 014247 106 QNQSFIEG--KVVVDVGCG--TGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV----E- 174 (428)
Q Consensus 106 ~~~~~~~~--~~VLDiGcG--tG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l----~- 174 (428)
+.....++ ++||-.|++ .|..+..+++. |+++|++++.+ +-.+.+++. .+.. .++..+-.++ .
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~---~~~d~~~~~~~~~~~~ 225 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD---AAINYKKDNVAEQLRE 225 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS---EEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc---eEEecCchHHHHHHHH
Confidence 44456788 999999983 45555555554 77689999998 555544331 2321 1222111111 0
Q ss_pred -CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 -IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 -~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
..+.+|+|+.+. + ...+....++|+++|+++..
T Consensus 226 ~~~~~~d~vi~~~-G---------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 226 SCPAGVDVYFDNV-G---------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp HCTTCEEEEEESC-C---------HHHHHHHHHTEEEEEEEEEC
T ss_pred hcCCCCCEEEECC-C---------HHHHHHHHHHhccCcEEEEE
Confidence 013699999753 2 13456677889999998753
No 371
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.18 E-value=0.091 Score=50.24 Aligned_cols=91 Identities=24% Similarity=0.295 Sum_probs=56.9
Q ss_pred hccCCCCCCEEEEEcC-C-CcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-------c
Q 014247 106 QNQSFIEGKVVVDVGC-G-TGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-------E 174 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGc-G-tG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-------~ 174 (428)
+.....++++||-+|+ | .|.++..+++. |+ +|+++ .+ +-++.+++ .|.. . +. +-.++ .
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~----lGa~--~--i~-~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRD----LGAT--P--ID-ASREPEDYAAEHT 212 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHH----HTSE--E--EE-TTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHH----cCCC--E--ec-cCCCHHHHHHHHh
Confidence 4456678999999994 3 46777777775 77 89999 66 65555543 2321 1 22 21111 1
Q ss_pred CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 ~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
....+|+|+-.. + . ..+....+.|+++|+++..
T Consensus 213 ~~~g~D~vid~~-g----~-----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 213 AGQGFDLVYDTL-G----G-----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TTSCEEEEEESS-C----T-----HHHHHHHHHEEEEEEEEES
T ss_pred cCCCceEEEECC-C----c-----HHHHHHHHHHhcCCeEEEE
Confidence 125799998643 1 1 2455666789999998854
No 372
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.12 E-value=0.097 Score=49.75 Aligned_cols=94 Identities=19% Similarity=0.238 Sum_probs=57.6
Q ss_pred hccCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------cc
Q 014247 106 QNQSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-------VE 174 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------l~ 174 (428)
+.....++++||-.|+ |.|..+..+++. |+ +|++++.+ +.++.+++. +.. .++..+-.+ ..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~----g~~---~~~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKL----GCH---HTINYSTQDFAEVVREIT 210 (333)
T ss_dssp TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHH
T ss_pred HhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCC---EEEECCCHHHHHHHHHHh
Confidence 3445678999999995 556666666554 77 89999999 666666442 221 122211111 11
Q ss_pred CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 ~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
....+|+|+... +. ..++...++|+++|+++..
T Consensus 211 ~~~~~d~vi~~~-g~---------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 211 GGKGVDVVYDSI-GK---------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp TTCCEEEEEECS-CT---------TTHHHHHHTEEEEEEEEEC
T ss_pred CCCCCeEEEECC-cH---------HHHHHHHHhhccCCEEEEE
Confidence 124699999743 21 2345666789999988754
No 373
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.11 E-value=0.55 Score=46.70 Aligned_cols=92 Identities=21% Similarity=0.261 Sum_probs=57.8
Q ss_pred cCCCCCCEEEEEcC-C-CcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccc-------------
Q 014247 108 QSFIEGKVVVDVGC-G-TGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRV------------- 170 (428)
Q Consensus 108 ~~~~~~~~VLDiGc-G-tG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~------------- 170 (428)
....+|.+||-+|+ | .|.++..+|+. |+ +|++++.+ +-++.+++. |.. .++...-
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~d~~~~~~~~~~~ 295 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAM----GAE---AIIDRNAEGYRFWKDENTQD 295 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCC---EEEETTTTTCCSEEETTEEC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhh----CCc---EEEecCcCcccccccccccc
Confidence 45678999999997 3 47777777776 77 88888888 666666442 332 1222111
Q ss_pred -----------ccccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 171 -----------EDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 171 -----------~~l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.++.....+|+|+-.. + - ..+....++|++||+++..
T Consensus 296 ~~~~~~~~~~i~~~t~g~g~Dvvid~~-G--------~-~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 296 PKEWKRFGKRIRELTGGEDIDIVFEHP-G--------R-ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEEECS-C--------H-HHHHHHHHHEEEEEEEEES
T ss_pred hHHHHHHHHHHHHHhCCCCCcEEEEcC-C--------c-hhHHHHHHHhhCCcEEEEE
Confidence 1111125799998643 1 1 2455666789999998854
No 374
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.07 E-value=2.5 Score=38.13 Aligned_cols=104 Identities=20% Similarity=0.243 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCC--CcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---------
Q 014247 111 IEGKVVVDVGCG--TGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcG--tG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--------- 175 (428)
..+++||-.|++ +|+ ++..+++.|+ +|+.++.+ ...+.+.+.....+- .++.++.+|+.+...
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHH
Confidence 567899999987 444 5667777788 79999887 555555555444332 258999999887431
Q ss_pred --CCceeEEEEec-chh-------hhc-chhhH-----------HHHHHHHhcccccCeEEEc
Q 014247 176 --DEEVDVIISEW-MGY-------MLL-YESML-----------GSVITARDRWLKRGGLILP 216 (428)
Q Consensus 176 --~~~~DlVvs~~-~~~-------~l~-~~~~~-----------~~~l~~~~~~LkpgG~lv~ 216 (428)
-+++|+++.+. +.. ... ....+ -.+++.+...++++|.++.
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~ 145 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVT 145 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEE
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEE
Confidence 04789988754 110 000 01111 2345667778888887764
No 375
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=89.90 E-value=0.075 Score=51.08 Aligned_cols=94 Identities=18% Similarity=0.114 Sum_probs=56.0
Q ss_pred hccCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-------cc
Q 014247 106 QNQSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-------VE 174 (428)
Q Consensus 106 ~~~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------l~ 174 (428)
+.....++++||-.|+ |.|..+..+++. |+ +|++++.+ +.++.+++. +.. .++..+-.+ ..
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKL----GAA---AGFNYKKEDFSEATLKFT 227 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHT
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CCc---EEEecCChHHHHHHHHHh
Confidence 3345678999999985 345555555554 77 89999998 666666432 221 122211111 11
Q ss_pred CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 ~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
....+|+|+... +. . .+....++|+++|+++..
T Consensus 228 ~~~~~d~vi~~~-G~-----~----~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 228 KGAGVNLILDCI-GG-----S----YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp TTSCEEEEEESS-CG-----G----GHHHHHHHEEEEEEEEEC
T ss_pred cCCCceEEEECC-Cc-----h----HHHHHHHhccCCCEEEEE
Confidence 124699999753 21 1 234556789999988753
No 376
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=89.39 E-value=0.22 Score=46.52 Aligned_cols=58 Identities=17% Similarity=0.189 Sum_probs=40.6
Q ss_pred cEEEEEcccccc-c-C-CCceeEEEEecchhhhc-----------------chhhHHHHHHHHhcccccCeEEEccCC
Q 014247 162 KVIVLHGRVEDV-E-I-DEEVDVIISEWMGYMLL-----------------YESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 162 ~v~~~~~d~~~l-~-~-~~~~DlVvs~~~~~~l~-----------------~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
+++++++|+.+. . + +++||+|++++.-.... +...+..++.++.++|+|||.+++...
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 579999998873 2 2 37999999987421110 111245678899999999999987544
No 377
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.14 E-value=1.2 Score=41.86 Aligned_cols=94 Identities=22% Similarity=0.212 Sum_probs=57.9
Q ss_pred hccCCCCCCEEEEEc-CC-CcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEccccc-cc-CCCcee
Q 014247 106 QNQSFIEGKVVVDVG-CG-TGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVED-VE-IDEEVD 180 (428)
Q Consensus 106 ~~~~~~~~~~VLDiG-cG-tG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~-l~-~~~~~D 180 (428)
+.....+|.+||-+| +| .|.++..+|+. |+ +|++++.++-.+.+++ .|.. .++..+-.+ +. .-..+|
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~g~D 217 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKRNHAFLKA----LGAE---QCINYHEEDFLLAISTPVD 217 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHHHHHHHHH----HTCS---EEEETTTSCHHHHCCSCEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccchHHHHHH----cCCC---EEEeCCCcchhhhhccCCC
Confidence 445678899999997 55 47777777776 77 8999985543544443 3432 223222111 11 115799
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+|+-.. + -+.+ ....++|+++|+++..
T Consensus 218 ~v~d~~-g--------~~~~-~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 218 AVIDLV-G--------GDVG-IQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEESS-C--------HHHH-HHHGGGEEEEEEEEEC
T ss_pred EEEECC-C--------cHHH-HHHHHhccCCCEEEEe
Confidence 998632 1 1222 5677899999998853
No 378
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=88.92 E-value=1.7 Score=39.22 Aligned_cols=70 Identities=17% Similarity=0.217 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++...+.+ ..++.++.+|+.+...
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 568899999988874 5566677788 89999998 6555544433 2358999999877431
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|+++.+.
T Consensus 80 ~g~id~lv~nA 90 (255)
T 4eso_A 80 LGAIDLLHINA 90 (255)
T ss_dssp HSSEEEEEECC
T ss_pred hCCCCEEEECC
Confidence 15789998754
No 379
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=88.85 E-value=1 Score=42.60 Aligned_cols=58 Identities=16% Similarity=0.211 Sum_probs=42.9
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChH----HHHHHHHHHHHC
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASD----IAVQANEVVKAN 157 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~----~~~~a~~~~~~~ 157 (428)
..+.+.+.+.. ..++..|||.-||+|..+..+.+.|. +.+|+|+++ .++.+++++...
T Consensus 229 ~~l~~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 229 AAVIERLVRAL-SHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp HHHHHHHHHHH-SCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHh-CCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHc
Confidence 44455555544 36889999999999999999999876 899999994 566677776543
No 380
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=88.70 E-value=0.56 Score=47.00 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=51.1
Q ss_pred CCEEEEEcCCCcHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC----------------
Q 014247 113 GKVVVDVGCGTGILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI---------------- 175 (428)
Q Consensus 113 ~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~---------------- 175 (428)
..+++|+-||.|.+++-+.++|+..|.++|++ ..++.-+.+. +......++++|+.++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~---~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANH---YCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHS---CCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhc---ccCCCcceeccchhhhhhccccccchhhHHhhhh
Confidence 35899999999999999999999789999999 5544443332 111124567789887642
Q ss_pred --CCceeEEEEec
Q 014247 176 --DEEVDVIISEW 186 (428)
Q Consensus 176 --~~~~DlVvs~~ 186 (428)
...+|+|+..+
T Consensus 165 ~~~~~~Dvl~gGp 177 (482)
T 3me5_A 165 QHIPEHDVLLAGF 177 (482)
T ss_dssp HHSCCCSEEEEEC
T ss_pred hcCCCCCEEEecC
Confidence 14689999854
No 381
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.31 E-value=3.5 Score=38.00 Aligned_cols=103 Identities=24% Similarity=0.317 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-H-HHHHHHHHHHHCCCCCcEEEEEcccccccC----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-D-IAVQANEVVKANNLTDKVIVLHGRVEDVEI---------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~-~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~---------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ . ..+.+.+.+...+ .++.++.+|+.+...
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVR 121 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 568899999988874 5566677787 89999987 4 3444444444433 468999999876421
Q ss_pred -CCceeEEEEec-chh---hhc--chhh-----------HHHHHHHHhcccccCeEEEc
Q 014247 176 -DEEVDVIISEW-MGY---MLL--YESM-----------LGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 176 -~~~~DlVvs~~-~~~---~l~--~~~~-----------~~~~l~~~~~~LkpgG~lv~ 216 (428)
-+++|++|.+. ... .+. ...+ .-.+++.+.+.|+.+|.++.
T Consensus 122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~ 180 (291)
T 3ijr_A 122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIIN 180 (291)
T ss_dssp HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEE
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEE
Confidence 14789999763 100 010 1111 22345666777888887664
No 382
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.05 E-value=5.2 Score=36.85 Aligned_cols=72 Identities=15% Similarity=0.213 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCC--cH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---------
Q 014247 111 IEGKVVVDVGCGT--GI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGt--G~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--------- 175 (428)
..+++||-.|++. |+ ++..+++.|+ +|+.++.+ ...+.+.+.....+ ++.++.+|+.+...
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHH
Confidence 5788999999873 33 5667777788 79999988 55555555444432 48889999876421
Q ss_pred --CCceeEEEEec
Q 014247 176 --DEEVDVIISEW 186 (428)
Q Consensus 176 --~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 105 ~~~g~iD~lVnnA 117 (293)
T 3grk_A 105 KKWGKLDFLVHAI 117 (293)
T ss_dssp HHTSCCSEEEECC
T ss_pred HhcCCCCEEEECC
Confidence 15789999864
No 383
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=87.73 E-value=0.7 Score=43.42 Aligned_cols=86 Identities=19% Similarity=0.226 Sum_probs=54.3
Q ss_pred CCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc-cccccc--CCCceeEEEEe
Q 014247 113 GKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG-RVEDVE--IDEEVDVIISE 185 (428)
Q Consensus 113 ~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~-d~~~l~--~~~~~DlVvs~ 185 (428)
+. ||-.|+ |.|.++..+|+. |+ +|++++.+ +-.+.+++. |.. .++.. +...+. ..+.+|+|+-.
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~~~d~v~d~ 218 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL----GAN---RILSRDEFAESRPLEKQLWAGAIDT 218 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH----TCS---EEEEGGGSSCCCSSCCCCEEEEEES
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCC---EEEecCCHHHHHhhcCCCccEEEEC
Confidence 45 999997 457778778876 77 89999988 766666542 322 22221 111111 12579998863
Q ss_pred cchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 186 WMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 186 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
. + . ..+....+.|+++|+++..
T Consensus 219 ~-g-----~----~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 219 V-G-----D----KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp S-C-----H----HHHHHHHHTEEEEEEEEEC
T ss_pred C-C-----c----HHHHHHHHHHhcCCEEEEE
Confidence 2 1 1 1566777899999998854
No 384
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=87.58 E-value=1.5 Score=35.60 Aligned_cols=87 Identities=20% Similarity=0.108 Sum_probs=52.0
Q ss_pred CEEEEEcCCC-cH-HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----CCceeEEEEe
Q 014247 114 KVVVDVGCGT-GI-LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-----DEEVDVIISE 185 (428)
Q Consensus 114 ~~VLDiGcGt-G~-ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-----~~~~DlVvs~ 185 (428)
.+|+=+|||. |. ++..|.+.|. .|+++|.+ +.++.+++ . .+.++.+|..+... -..+|+|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 5788999875 32 3444555576 89999999 76655443 2 36788888765321 1578998873
Q ss_pred cchhhhcchhhHHHHHHHHhcccccCeEEE
Q 014247 186 WMGYMLLYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 186 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
. .... ....+-...+.+.|+..++
T Consensus 79 ~-----~~~~-~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 79 I-----PNGY-EAGEIVASARAKNPDIEII 102 (140)
T ss_dssp C-----SCHH-HHHHHHHHHHHHCSSSEEE
T ss_pred C-----CChH-HHHHHHHHHHHHCCCCeEE
Confidence 2 1111 1111222345567777665
No 385
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.24 E-value=2.2 Score=38.82 Aligned_cols=73 Identities=23% Similarity=0.287 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
.+|+++|--|++.|+ .+..+++.|+ +|+.+|.+ +-++.+.+.++..+ .++.++.+|+.+...
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999885 5667777888 89999999 77777777666655 358899999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 82 ~G~iDiLVNNA 92 (254)
T 4fn4_A 82 YSRIDVLCNNA 92 (254)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 16899999864
No 386
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=87.17 E-value=3.2 Score=37.47 Aligned_cols=73 Identities=18% Similarity=0.234 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEE-eCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAV-DAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI---------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~gi-D~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~---------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.+ +.+ +..+.+.+.+...+ .++.++.+|+.+...
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 568899999998874 5666777788 78877 666 65555555554433 358899999876421
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 83 ~~g~id~lv~nA 94 (259)
T 3edm_A 83 KFGEIHGLVHVA 94 (259)
T ss_dssp HHCSEEEEEECC
T ss_pred HhCCCCEEEECC
Confidence 04789999764
No 387
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=86.85 E-value=1.6 Score=39.80 Aligned_cols=73 Identities=22% Similarity=0.255 Sum_probs=56.0
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
.+|+++|--|++.|+ .+..+++.|+ +|+.+|.+ +.++.+.+.+...+. ++..+.+|+.+...
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGY--DAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC--CEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 678999999999885 5677778888 89999999 777776666666543 58888999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 84 ~G~iDiLVNNA 94 (255)
T 4g81_D 84 GIHVDILINNA 94 (255)
T ss_dssp TCCCCEEEECC
T ss_pred CCCCcEEEECC
Confidence 26899999864
No 388
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=86.64 E-value=1.6 Score=41.86 Aligned_cols=83 Identities=22% Similarity=0.232 Sum_probs=50.2
Q ss_pred CCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeChH----HHHHHHHHHHHCCCCCcEEEEEcccccccC-------CCce
Q 014247 113 GKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDASD----IAVQANEVVKANNLTDKVIVLHGRVEDVEI-------DEEV 179 (428)
Q Consensus 113 ~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s~----~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-------~~~~ 179 (428)
+++||-+|+|. |.++..+++. |+ +|++++.++ -++.+++ .|. ..+ | .+ .. ...+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~----~ga----~~v--~-~~-~~~~~~~~~~~~~ 247 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEE----TKT----NYY--N-SS-NGYDKLKDSVGKF 247 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHH----HTC----EEE--E-CT-TCSHHHHHHHCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHH----hCC----cee--c-hH-HHHHHHHHhCCCC
Confidence 89999999842 4455555554 88 899999863 3333332 232 222 2 21 11 1469
Q ss_pred eEEEEecchhhhcchhhHHHHH-HHHhcccccCeEEEcc
Q 014247 180 DVIISEWMGYMLLYESMLGSVI-TARDRWLKRGGLILPS 217 (428)
Q Consensus 180 DlVvs~~~~~~l~~~~~~~~~l-~~~~~~LkpgG~lv~~ 217 (428)
|+|+... + .. ..+ +...+.|+++|+++..
T Consensus 248 d~vid~~-g----~~----~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 248 DVIIDAT-G----AD----VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEEECC-C----CC----THHHHHHGGGEEEEEEEEEC
T ss_pred CEEEECC-C----Ch----HHHHHHHHHHHhcCCEEEEE
Confidence 9999743 1 11 134 6677889999988754
No 389
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=86.34 E-value=3.3 Score=37.39 Aligned_cols=75 Identities=23% Similarity=0.339 Sum_probs=48.7
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|. ++..+++.|+ +|++++.+ +....+.+.+.......++.++.+|+.+...
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 457899999987764 4555666787 89999988 5544443333221112358889999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+++|++|.+.
T Consensus 84 ~g~id~lv~~A 94 (267)
T 2gdz_A 84 FGRLDILVNNA 94 (267)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 04689999864
No 390
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=86.20 E-value=1.7 Score=39.46 Aligned_cols=75 Identities=16% Similarity=0.216 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-------CCce
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-------DEEV 179 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-------~~~~ 179 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +-++.+.+.+...+....+.++.+|+.+... -++.
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 567899999988764 4566667788 89999998 6666555555544434468888888876321 1578
Q ss_pred eEEEEec
Q 014247 180 DVIISEW 186 (428)
Q Consensus 180 DlVvs~~ 186 (428)
|++|.+.
T Consensus 87 d~lv~nA 93 (267)
T 3t4x_A 87 DILINNL 93 (267)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9999864
No 391
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=86.14 E-value=4.2 Score=37.54 Aligned_cols=72 Identities=18% Similarity=0.222 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCCC--cH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---------
Q 014247 111 IEGKVVVDVGCGT--GI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGt--G~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--------- 175 (428)
..+++||-.|++. |+ ++..+++.|+ +|+.++.+ ...+.+.+.....+ .+.++.+|+.+...
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHH
Confidence 4678999999864 43 5667777788 79999988 55555544444432 36788899876421
Q ss_pred --CCceeEEEEec
Q 014247 176 --DEEVDVIISEW 186 (428)
Q Consensus 176 --~~~~DlVvs~~ 186 (428)
-+++|++|.+.
T Consensus 104 ~~~g~iD~lVnnA 116 (296)
T 3k31_A 104 EEWGSLDFVVHAV 116 (296)
T ss_dssp HHHSCCSEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 05789999864
No 392
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=86.00 E-value=0.87 Score=43.55 Aligned_cols=100 Identities=15% Similarity=0.105 Sum_probs=55.0
Q ss_pred HHhccCCCCC-CEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc------cccc
Q 014247 104 IMQNQSFIEG-KVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG------RVED 172 (428)
Q Consensus 104 i~~~~~~~~~-~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~------d~~~ 172 (428)
+.+.....+| .+||-+|+ |.|.++..+|+. |+ +|+++..+ +.+...++.+++.|.. .++.. ++.+
T Consensus 158 l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~ 233 (364)
T 1gu7_A 158 LTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGP 233 (364)
T ss_dssp HHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHH
T ss_pred HHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHHHHHhcCCe---EEEecCccchHHHHH
Confidence 3333456788 99999997 346777777775 77 67777644 3211111222333432 22221 1111
Q ss_pred -c---c--CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 173 -V---E--IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 173 -l---~--~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+ . ....+|+|+-.. + -..+. ...++|+++|+++..
T Consensus 234 ~i~~~t~~~~~g~Dvvid~~-G--------~~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 234 TIKEWIKQSGGEAKLALNCV-G--------GKSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp HHHHHHHHHTCCEEEEEESS-C--------HHHHH-HHHHTSCTTCEEEEC
T ss_pred HHHHHhhccCCCceEEEECC-C--------chhHH-HHHHHhccCCEEEEe
Confidence 1 1 124699999642 1 11222 446889999998754
No 393
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=85.85 E-value=0.49 Score=44.82 Aligned_cols=59 Identities=14% Similarity=0.183 Sum_probs=41.9
Q ss_pred CcEEEEEccccc-cc-C-CCceeEEEEecchhhh-----------cchhhHHHHHHHHhcccccCeEEEccCC
Q 014247 161 DKVIVLHGRVED-VE-I-DEEVDVIISEWMGYML-----------LYESMLGSVITARDRWLKRGGLILPSYA 219 (428)
Q Consensus 161 ~~v~~~~~d~~~-l~-~-~~~~DlVvs~~~~~~l-----------~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 219 (428)
+...++++|..+ +. + +++||+|++++.-... .+...+..++.++.++|+|||.+++...
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 357899999875 32 2 3789999998742111 1123477888999999999999987543
No 394
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=85.36 E-value=0.63 Score=44.54 Aligned_cols=93 Identities=19% Similarity=0.221 Sum_probs=55.0
Q ss_pred CCC-CCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc-ccccc-cCCCceeEE
Q 014247 109 SFI-EGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG-RVEDV-EIDEEVDVI 182 (428)
Q Consensus 109 ~~~-~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~-d~~~l-~~~~~~DlV 182 (428)
... +|.+||-+|+|. |.++..+|+. |+ +|++++.+ +-.+.+++ +.|... ++.. +...+ ...+.+|+|
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~---~lGa~~---vi~~~~~~~~~~~~~g~D~v 248 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQ---DLGADD---YVIGSDQAKMSELADSLDYV 248 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHT---TSCCSC---EEETTCHHHHHHSTTTEEEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHH---HcCCce---eeccccHHHHHHhcCCCCEE
Confidence 445 899999999863 5666666665 77 89999998 65544431 233322 2221 11111 112479999
Q ss_pred EEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 183 ISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 183 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+-.. + ... .+....++|+++|+++..
T Consensus 249 id~~-g----~~~----~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 249 IDTV-P----VHH----ALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EECC-C----SCC----CSHHHHTTEEEEEEEEEC
T ss_pred EECC-C----ChH----HHHHHHHHhccCCEEEEe
Confidence 8642 1 111 134455789999998754
No 395
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=85.24 E-value=0.85 Score=45.06 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=56.8
Q ss_pred cCCCCCCEEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccc-------------
Q 014247 108 QSFIEGKVVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRV------------- 170 (428)
Q Consensus 108 ~~~~~~~~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~------------- 170 (428)
....+|++||-.|+ |.|.++..+++. |+ +|++++.+ +-++.+++ .|....+.....+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccch
Confidence 45678999999997 346677777775 76 88999888 66655533 34322111111111
Q ss_pred ---------ccccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 171 ---------EDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 171 ---------~~l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.++. ...+|+|+-.. +. ..+....++|++||+++..
T Consensus 291 ~~~~~~~~v~~~~-g~g~Dvvid~~-G~---------~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 291 TGRKLAKLVVEKA-GREPDIVFEHT-GR---------VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHH-SSCCSEEEECS-CH---------HHHHHHHHHSCTTCEEEES
T ss_pred hhhHHHHHHHHHh-CCCceEEEECC-Cc---------hHHHHHHHHHhcCCEEEEE
Confidence 0111 35799999743 11 1345566789999988754
No 396
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.15 E-value=3.9 Score=38.31 Aligned_cols=88 Identities=15% Similarity=0.147 Sum_probs=56.1
Q ss_pred CCEEEEEcCCC--cHHHHHHHHcCCC-eEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccc-ccCCCceeEEEEecc
Q 014247 113 GKVVVDVGCGT--GILSIFCAQAGAK-RVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVED-VEIDEEVDVIISEWM 187 (428)
Q Consensus 113 ~~~VLDiGcGt--G~ls~~la~~g~~-~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~-l~~~~~~DlVvs~~~ 187 (428)
.++|.=||+|. +.++..+++.|.. +|+++|.+ +.++.+. +.|..+ . ...+..+ .- ...|+|+...
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~----~~G~~~--~-~~~~~~~~~~--~~aDvVilav- 102 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--E-GTTSIAKVED--FSPDFVMLSS- 102 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--E-EESCTTGGGG--GCCSEEEECS-
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH----HCCCcc--h-hcCCHHHHhh--ccCCEEEEeC-
Confidence 36899999885 3456666666753 89999999 6665543 334321 1 2234433 21 4689999743
Q ss_pred hhhhcchhhHHHHHHHHhcccccCeEEE
Q 014247 188 GYMLLYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 188 ~~~l~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
.......++.++...|++|.+++
T Consensus 103 -----p~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 103 -----PVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp -----CGGGHHHHHHHHHHHSCTTCEEE
T ss_pred -----CHHHHHHHHHHHhhccCCCcEEE
Confidence 12235677888888899987665
No 397
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=85.06 E-value=3.3 Score=40.04 Aligned_cols=69 Identities=16% Similarity=0.183 Sum_probs=43.2
Q ss_pred CCCEEEEEcCCCcHHHHHHHHc--------CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEE
Q 014247 112 EGKVVVDVGCGTGILSIFCAQA--------GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVI 182 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~--------g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlV 182 (428)
....|+|+|.|+|.++.-+.+. ...+++.||+| .+.+.-++.+... ++|.+. .++.+++. ..-+|
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~---~~v~W~-~~l~~lp~--~~~~v 153 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI---RNIHWH-DSFEDVPE--GPAVI 153 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC---SSEEEE-SSGGGSCC--SSEEE
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC---CCeEEe-CChhhcCC--CCeEE
Confidence 3457999999999998776543 12289999999 5555444433222 246654 34555542 24567
Q ss_pred EEec
Q 014247 183 ISEW 186 (428)
Q Consensus 183 vs~~ 186 (428)
+++-
T Consensus 154 iANE 157 (387)
T 1zkd_A 154 LANE 157 (387)
T ss_dssp EEES
T ss_pred Eecc
Confidence 7755
No 398
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=84.54 E-value=3.2 Score=38.17 Aligned_cols=70 Identities=19% Similarity=0.287 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
++|+++|--|++.|+ .+..+++.|+ +|+.+|.+ +.++.+.+.+ ..++..+.+|+.+...
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 100 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAE 100 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 689999999999885 5677778888 89999999 6665544433 2357788899876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 101 ~G~iDiLVNNA 111 (273)
T 4fgs_A 101 AGRIDVLFVNA 111 (273)
T ss_dssp HSCEEEEEECC
T ss_pred cCCCCEEEECC
Confidence 16899998864
No 399
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=84.44 E-value=5 Score=36.34 Aligned_cols=96 Identities=14% Similarity=0.035 Sum_probs=57.1
Q ss_pred CEEEEEcCCCcHHHHHHHHc----CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecch
Q 014247 114 KVVVDVGCGTGILSIFCAQA----GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMG 188 (428)
Q Consensus 114 ~~VLDiGcGtG~ls~~la~~----g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~ 188 (428)
++||-.|+ |.++..+++. |. +|++++.+ ....... . .+++++.+|+.++. -..+|+|+... +
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~-~~~~d~vi~~a-~ 72 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIR----A----SGAEPLLWPGEEPS-LDGVTHLLIST-A 72 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHH----H----TTEEEEESSSSCCC-CTTCCEEEECC-C
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHh----h----CCCeEEEecccccc-cCCCCEEEECC-C
Confidence 68999995 8777766653 66 89999988 4332221 1 24899999999876 57799999743 1
Q ss_pred hhhcchhhHHHHHHHHhccccc-CeEEEccCCeee
Q 014247 189 YMLLYESMLGSVITARDRWLKR-GGLILPSYATLY 222 (428)
Q Consensus 189 ~~l~~~~~~~~~l~~~~~~Lkp-gG~lv~~~~~~~ 222 (428)
...........+++.+.+.-.. .-.+++++...|
T Consensus 73 ~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vy 107 (286)
T 3ius_A 73 PDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVY 107 (286)
T ss_dssp CBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGG
T ss_pred ccccccHHHHHHHHHHHhhcCCceEEEEeecceec
Confidence 1111222234455555442112 234445544443
No 400
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=84.43 E-value=0.66 Score=44.64 Aligned_cols=97 Identities=20% Similarity=0.209 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCC-cHHHHHHH-HcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-CCceeEEEEec
Q 014247 111 IEGKVVVDVGCGT-GILSIFCA-QAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-DEEVDVIISEW 186 (428)
Q Consensus 111 ~~~~~VLDiGcGt-G~ls~~la-~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-~~~~DlVvs~~ 186 (428)
.++++||-+|+|. |..+..++ ..|+ +|+++|.+ +-++.+++.... .+..+..+..++.. -..+|+|+...
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~~~ 238 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIGAV 238 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEECC
Confidence 3458999999963 33333333 3488 89999999 666665544322 13233222222111 13689998743
Q ss_pred chhhhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 187 MGYMLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 187 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
. ......+.-+.+...+.|+|||+++-
T Consensus 239 ~---~~~~~~~~li~~~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 239 L---VPGRRAPILVPASLVEQMRTGSVIVD 265 (361)
T ss_dssp C---CTTSSCCCCBCHHHHTTSCTTCEEEE
T ss_pred C---cCCCCCCeecCHHHHhhCCCCCEEEE
Confidence 1 11100000012334567899998774
No 401
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.29 E-value=3.1 Score=38.95 Aligned_cols=75 Identities=19% Similarity=0.179 Sum_probs=54.7
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|++++.+ +-++.+.+.+...+...++.++.+|+.+...
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 467899999998875 5566667788 89999999 7666666655554443469999999877421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+.+|++|.+.
T Consensus 85 ~g~id~lv~nA 95 (319)
T 3ioy_A 85 FGPVSILCNNA 95 (319)
T ss_dssp TCCEEEEEECC
T ss_pred CCCCCEEEECC
Confidence 14789999864
No 402
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=84.29 E-value=6.6 Score=38.92 Aligned_cols=97 Identities=19% Similarity=0.232 Sum_probs=60.4
Q ss_pred CCEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHC-------C------C-CCcEEEEEcccccccC
Q 014247 113 GKVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKAN-------N------L-TDKVIVLHGRVEDVEI 175 (428)
Q Consensus 113 ~~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~-------~------~-~~~v~~~~~d~~~l~~ 175 (428)
-.+|.-||+|. | .++..++++|. .|+.+|.+ +.++.+++.+..+ + . .....+ ..|...+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~-- 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL-- 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH--
Confidence 35799999997 3 45666777777 89999999 7777665533210 1 0 111222 3444322
Q ss_pred CCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccC
Q 014247 176 DEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 176 ~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
...|+|+... .........++.++...++|+.+++-++
T Consensus 113 -~~aDlVIeaV----pe~~~~k~~v~~~l~~~~~~~~ii~snT 150 (463)
T 1zcj_A 113 -STVDLVVEAV----FEDMNLKKKVFAELSALCKPGAFLCTNT 150 (463)
T ss_dssp -TTCSEEEECC----CSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred -CCCCEEEEcC----CCCHHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 5689999743 1222224677788888899988777543
No 403
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=84.27 E-value=6 Score=36.12 Aligned_cols=74 Identities=15% Similarity=0.174 Sum_probs=52.3
Q ss_pred CCCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeC-h-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---------
Q 014247 110 FIEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDA-S-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--------- 175 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~-s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--------- 175 (428)
...+++||-.|++.|+ ++..+++.|+ +|+.++. + +.++...+.+...+ .++.++.+|+.+...
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLG--ARVIFLRADLADLSSHQATVDAVV 102 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHH
Confidence 4578899999988874 5666777788 8999986 4 55555445454443 358999999887532
Q ss_pred --CCceeEEEEec
Q 014247 176 --DEEVDVIISEW 186 (428)
Q Consensus 176 --~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 103 ~~~g~iD~lvnnA 115 (280)
T 4da9_A 103 AEFGRIDCLVNNA 115 (280)
T ss_dssp HHHSCCCEEEEEC
T ss_pred HHcCCCCEEEECC
Confidence 04789999864
No 404
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=84.14 E-value=0.87 Score=43.73 Aligned_cols=93 Identities=22% Similarity=0.193 Sum_probs=53.4
Q ss_pred CCC-CCCEEEEEcCCC-cHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc-ccccc-cCCCceeEE
Q 014247 109 SFI-EGKVVVDVGCGT-GILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG-RVEDV-EIDEEVDVI 182 (428)
Q Consensus 109 ~~~-~~~~VLDiGcGt-G~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~-d~~~l-~~~~~~DlV 182 (428)
... ++.+||-+|+|. |.++..+|+. |+ +|++++.+ +-.+.+++ ..|.. .++.. +...+ ...+.+|+|
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~---~lGa~---~v~~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALK---NFGAD---SFLVSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHH---TSCCS---EEEETTCHHHHHHTTTCEEEE
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---hcCCc---eEEeccCHHHHHHhhCCCCEE
Confidence 445 899999999863 5566666665 77 89999988 55544432 23321 22221 11111 111479999
Q ss_pred EEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 183 ISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 183 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+... + ... .++...+.|+++|+++.-
T Consensus 256 id~~-g----~~~----~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 256 IDTV-S----AVH----PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EECC-S----SCC----CSHHHHHHEEEEEEEEEC
T ss_pred EECC-C----cHH----HHHHHHHHHhcCCEEEEE
Confidence 9743 1 111 123445678999988753
No 405
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=84.04 E-value=4 Score=36.62 Aligned_cols=72 Identities=14% Similarity=0.095 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCCcH---HHHHHHH-cCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 112 EGKVVVDVGCGTGI---LSIFCAQ-AGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 112 ~~~~VLDiGcGtG~---ls~~la~-~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
++++||-.|++.|+ ++..+++ .|+ +|++++.+ .....+.+.+...+ .++.++.+|+.+...
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 46788888866543 3445566 677 89999988 65555555555443 358899999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+++|+||.+.
T Consensus 80 ~g~id~li~~A 90 (276)
T 1wma_A 80 YGGLDVLVNNA 90 (276)
T ss_dssp HSSEEEEEECC
T ss_pred cCCCCEEEECC
Confidence 03799998754
No 406
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=83.67 E-value=0.5 Score=44.56 Aligned_cols=93 Identities=13% Similarity=0.120 Sum_probs=54.1
Q ss_pred CCCCCC-EEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc---cccccCCCcee
Q 014247 109 SFIEGK-VVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR---VEDVEIDEEVD 180 (428)
Q Consensus 109 ~~~~~~-~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d---~~~l~~~~~~D 180 (428)
...++. +||-+|+ |.|.++..+++. |+ +|++++.+ +-++.+++ .|...-+.....+ +..+. ...+|
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~-~~~~d 218 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRV----LGAKEVLAREDVMAERIRPLD-KQRWA 218 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHH----TTCSEEEECC---------CC-SCCEE
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH----cCCcEEEecCCcHHHHHHHhc-CCccc
Confidence 445665 8999997 456777777775 77 79999988 65555543 3332111111110 01111 24799
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+|+-.. + . . .+....+.|+++|+++..
T Consensus 219 ~vid~~-g----~-~----~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 219 AAVDPV-G----G-R----TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEEECS-T----T-T----THHHHHHTEEEEEEEEEC
T ss_pred EEEECC-c----H-H----HHHHHHHhhccCCEEEEE
Confidence 998643 1 1 1 244556789999998754
No 407
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=83.64 E-value=3.2 Score=39.07 Aligned_cols=102 Identities=19% Similarity=0.154 Sum_probs=67.8
Q ss_pred CCEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHC-------C-CCC---------cEEEEEccccc
Q 014247 113 GKVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKAN-------N-LTD---------KVIVLHGRVED 172 (428)
Q Consensus 113 ~~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~-------~-~~~---------~v~~~~~d~~~ 172 (428)
..+|.-||+|+ | .++..+|.+|. .|+..|++ +.++.+.+.++.. + +.. ++++. .|+.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~l~~ 83 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cchHh
Confidence 46899999997 2 36777788888 89999999 8877776655432 1 111 13322 23222
Q ss_pred ccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeee
Q 014247 173 VEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLY 222 (428)
Q Consensus 173 l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 222 (428)
. -...|+|+=. +......-.++++++..+++|+.+|.-++.++.
T Consensus 84 a--~~~ad~ViEa----v~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~ 127 (319)
T 3ado_A 84 A--VEGVVHIQEC----VPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLL 127 (319)
T ss_dssp H--TTTEEEEEEC----CCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCC
T ss_pred H--hccCcEEeec----cccHHHHHHHHHHHHHHHhhhcceeehhhhhcc
Confidence 1 1467888742 455566678899999999999998876665543
No 408
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=83.61 E-value=0.97 Score=43.52 Aligned_cols=92 Identities=20% Similarity=0.142 Sum_probs=54.1
Q ss_pred CCCCCEEEEEcC-C-CcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEccccc----ccCCCceeEE
Q 014247 110 FIEGKVVVDVGC-G-TGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVED----VEIDEEVDVI 182 (428)
Q Consensus 110 ~~~~~~VLDiGc-G-tG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~----l~~~~~~DlV 182 (428)
..+|++||-.|+ | .|.++..+|+. |+ +|++++..+-.+.+ ++.|.. .++..+-.+ +.....+|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~~~~~~~~~----~~lGa~---~v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVCSQDASELV----RKLGAD---DVIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECGGGHHHH----HHTTCS---EEEETTSSCHHHHHHTSCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEeChHHHHHH----HHcCCC---EEEECCchHHHHHHhhcCCCCEE
Confidence 578999999993 4 46777777765 77 89999843444444 333432 222211111 1111469999
Q ss_pred EEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 183 ISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 183 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+-.. + . ....+....+.|+++|+++..
T Consensus 253 id~~-g----~---~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 253 LDNV-G----G---STETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp EESS-C----T---THHHHGGGGBCSSSCCEEEES
T ss_pred EECC-C----C---hhhhhHHHHHhhcCCcEEEEe
Confidence 8643 1 1 112345567889999998753
No 409
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=83.28 E-value=6.1 Score=35.81 Aligned_cols=73 Identities=22% Similarity=0.235 Sum_probs=49.0
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEe-Ch-HHHHHHHHHHHHCCCCCcEEEEEcccccccC----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVD-AS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI---------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD-~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~---------- 175 (428)
..++++|-.|++.|+ ++..+++.|+ +|+.++ .+ ...+...+.+...+ .++.++.+|+.+...
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEE 101 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 467899999998875 5666777788 777764 34 55555555555443 358899999876421
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 102 ~~g~iD~lvnnA 113 (267)
T 3u5t_A 102 AFGGVDVLVNNA 113 (267)
T ss_dssp HHSCEEEEEECC
T ss_pred HcCCCCEEEECC
Confidence 14799999864
No 410
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=83.20 E-value=0.72 Score=43.48 Aligned_cols=91 Identities=16% Similarity=0.184 Sum_probs=55.4
Q ss_pred CCCCCC-EEEEEcC--CCcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEc-cc-cc-cc--CCCc
Q 014247 109 SFIEGK-VVVDVGC--GTGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHG-RV-ED-VE--IDEE 178 (428)
Q Consensus 109 ~~~~~~-~VLDiGc--GtG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~-d~-~~-l~--~~~~ 178 (428)
...++. +||-+|+ |.|.++..+++. |+ +|++++.+ +-++.+++ .|.. .++.. +. .+ +. ....
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQ----LGAS---EVISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHH----HTCS---EEEEHHHHCSSCCCSSCCCC
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCc---EEEECCCchHHHHHHhhcCC
Confidence 345665 8999997 356677777765 87 69999988 66665544 2322 12221 11 01 11 1246
Q ss_pred eeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 179 VDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
+|+|+-.. + . ..+....+.|+++|+++..
T Consensus 218 ~d~vid~~-g----~-----~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 218 WQGAVDPV-G----G-----KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp EEEEEESC-C----T-----HHHHHHHTTEEEEEEEEEC
T ss_pred ccEEEECC-c----H-----HHHHHHHHhhcCCCEEEEE
Confidence 99998643 1 1 1356667889999998754
No 411
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=83.17 E-value=4.4 Score=37.27 Aligned_cols=76 Identities=14% Similarity=0.215 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCC--CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGA--KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~--~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ .+|+.++.+ +.++.+.+.+.......++.++.+|+.+...
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 357899999988764 3445555565 389999998 7666665555543333468999999877531
Q ss_pred --CCceeEEEEec
Q 014247 176 --DEEVDVIISEW 186 (428)
Q Consensus 176 --~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 111 ~~~g~iD~lVnnA 123 (287)
T 3rku_A 111 QEFKDIDILVNNA 123 (287)
T ss_dssp GGGCSCCEEEECC
T ss_pred HhcCCCCEEEECC
Confidence 14789999864
No 412
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=83.03 E-value=4.7 Score=36.63 Aligned_cols=75 Identities=16% Similarity=0.198 Sum_probs=52.1
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|++++.+ ..++...+.+...+...++.++.+|+.+...
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 357899999987653 4455566677 89999998 6665555555555554568899999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+.+|+||.+.
T Consensus 109 ~g~iD~vi~~A 119 (279)
T 1xg5_A 109 HSGVDICINNA 119 (279)
T ss_dssp HCCCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 03789998754
No 413
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=82.81 E-value=2.9 Score=41.08 Aligned_cols=68 Identities=26% Similarity=0.377 Sum_probs=43.8
Q ss_pred CCEEEEEcCCCcHHHHHHHHc----C--CCeEEEEeCh-HHHHHHHHHHHHC--CCCCcEEEEEcccccccCCCcee-EE
Q 014247 113 GKVVVDVGCGTGILSIFCAQA----G--AKRVYAVDAS-DIAVQANEVVKAN--NLTDKVIVLHGRVEDVEIDEEVD-VI 182 (428)
Q Consensus 113 ~~~VLDiGcGtG~ls~~la~~----g--~~~V~giD~s-~~~~~a~~~~~~~--~~~~~v~~~~~d~~~l~~~~~~D-lV 182 (428)
...|+|+|.|+|.++.-+.+. + ..+++.||+| .+.+.-++.+... .+..+|.+.. ++ ++.+. +|
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~v~W~~----~l--P~~~~g~i 211 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGAQAPGLAARVRWLD----AL--PERFEGVV 211 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHHHSTTTGGGEEEES----SC--CSCEEEEE
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhccccccCCCceecc----cC--CccCceEE
Confidence 469999999999987766543 2 3489999999 7766666665532 1233566643 13 24444 56
Q ss_pred EEec
Q 014247 183 ISEW 186 (428)
Q Consensus 183 vs~~ 186 (428)
+++-
T Consensus 212 iANE 215 (432)
T 4f3n_A 212 VGNE 215 (432)
T ss_dssp EEES
T ss_pred Eeeh
Confidence 6554
No 414
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=82.78 E-value=3.3 Score=40.04 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=65.0
Q ss_pred HHHHhccCCCCCCEEEEEcCCCcHHHHHHHHcCCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeE
Q 014247 102 AAIMQNQSFIEGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDV 181 (428)
Q Consensus 102 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~Dl 181 (428)
+.+.+.+.. .+.+||.++-+-|.++..++.. .+|+.+.-|.....| ++.+++.. .. ..... ..+..||+
T Consensus 36 ~~l~~~~~~-~~~~~l~~n~~~g~~~~~~~~~--~~~~~~~~~~~~~~~---l~~~~~~~--~~-~~~~~--~~~~~~d~ 104 (381)
T 3dmg_A 36 DLLQKTVEP-FGERALDLNPGVGWGSLPLEGR--MAVERLETSRAAFRC---LTASGLQA--RL-ALPWE--AAAGAYDL 104 (381)
T ss_dssp HHHHTTCCC-CSSEEEESSCTTSTTTGGGBTT--BEEEEEECBHHHHHH---HHHTTCCC--EE-CCGGG--SCTTCEEE
T ss_pred HHHHHHHHH-hCCcEEEecCCCCccccccCCC--CceEEEeCcHHHHHH---HHHcCCCc--cc-cCCcc--CCcCCCCE
Confidence 344555543 3468999999999887766422 378888777333333 66678754 22 11111 23478999
Q ss_pred EEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 182 IISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
|+.-+.-. -........|..+.+.|+|||.+++.
T Consensus 105 v~~~~Pk~--k~~~~~~~~l~~~~~~l~~g~~i~~~ 138 (381)
T 3dmg_A 105 VVLALPAG--RGTAYVQASLVAAARALRMGGRLYLA 138 (381)
T ss_dssp EEEECCGG--GCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCcc--hhHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 99743110 01234677888889999999998754
No 415
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=82.71 E-value=6.1 Score=35.62 Aligned_cols=73 Identities=23% Similarity=0.336 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+...+ .++.++.+|+.+...
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 578899999998875 5666777788 89999999 76666666555543 458999999877421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 86 ~g~id~lv~nA 96 (264)
T 3ucx_A 86 YGRVDVVINNA 96 (264)
T ss_dssp TSCCSEEEECC
T ss_pred cCCCcEEEECC
Confidence 15789999864
No 416
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=82.62 E-value=17 Score=37.91 Aligned_cols=118 Identities=19% Similarity=0.197 Sum_probs=70.9
Q ss_pred hHHHHHHHHHhccCCC---CCCEEEEEcCCCcHHHHHHHHc-C------CC--eEEEEeChHHHHHHHHHHHHCC-----
Q 014247 96 RTETYRAAIMQNQSFI---EGKVVVDVGCGTGILSIFCAQA-G------AK--RVYAVDASDIAVQANEVVKANN----- 158 (428)
Q Consensus 96 r~~~~~~~i~~~~~~~---~~~~VLDiGcGtG~ls~~la~~-g------~~--~V~giD~s~~~~~a~~~~~~~~----- 158 (428)
|...+.+.+.+.+... +...|+-+|||.=.....+... . .. +++=||..+.++.-++.+....
T Consensus 88 R~~~~d~~v~~fl~~~~~~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~ 167 (695)
T 2zwa_A 88 RLFAIRSRLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKI 167 (695)
T ss_dssp HHHHHHHHHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHh
Confidence 4444444554444322 4568999999998888877654 1 12 4455555555554444444221
Q ss_pred C------------------CCcEEEEEccccccc------------CCCceeEEEEecchhhhcchhhHHHHHHHHhccc
Q 014247 159 L------------------TDKVIVLHGRVEDVE------------IDEEVDVIISEWMGYMLLYESMLGSVITARDRWL 208 (428)
Q Consensus 159 ~------------------~~~v~~~~~d~~~l~------------~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~L 208 (428)
+ .++..++.+|+++.. .+...-+++++.+..++ .......+++.+.++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl-~~~~~~~ll~~~~~~- 245 (695)
T 2zwa_A 168 IGLSEDKDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYM-KPERSDSIIEATSKM- 245 (695)
T ss_dssp TTCCSSCSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGS-CHHHHHHHHHHHHTS-
T ss_pred hccccccccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEc-CHHHHHHHHHHHhhC-
Confidence 0 136899999988741 12455688888865444 344588888888864
Q ss_pred ccCeEEEc
Q 014247 209 KRGGLILP 216 (428)
Q Consensus 209 kpgG~lv~ 216 (428)
++|.++.
T Consensus 246 -~~~~~~~ 252 (695)
T 2zwa_A 246 -ENSHFII 252 (695)
T ss_dssp -SSEEEEE
T ss_pred -CCceEEE
Confidence 5666553
No 417
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=82.32 E-value=5.3 Score=36.06 Aligned_cols=75 Identities=16% Similarity=0.120 Sum_probs=52.7
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +-++.+.+.+....-..++.++.+|+.+...
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 567899999998874 5666777788 79999998 6666655555442122348899999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 85 ~g~id~lvnnA 95 (265)
T 3lf2_A 85 LGCASILVNNA 95 (265)
T ss_dssp HCSCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999864
No 418
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=82.15 E-value=4.3 Score=37.49 Aligned_cols=86 Identities=15% Similarity=0.219 Sum_probs=50.1
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV 173 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l 173 (428)
..+...+.+......+++||-+|+| |. .+..+++.|+++|+.++.+ +-++...+.+......-.+... +..++
T Consensus 112 ~G~~~~l~~~~~~l~~k~vlVlGaG-G~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~--~~~~l 188 (283)
T 3jyo_A 112 SGFGRGMEEGLPNAKLDSVVQVGAG-GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGV--DARGI 188 (283)
T ss_dssp HHHHHHHHHHCTTCCCSEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEE--CSTTH
T ss_pred HHHHHHHHHhCcCcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEc--CHHHH
Confidence 3455666555445678999999997 32 3445566688889999998 6555443433332111123322 22222
Q ss_pred cC-CCceeEEEEec
Q 014247 174 EI-DEEVDVIISEW 186 (428)
Q Consensus 174 ~~-~~~~DlVvs~~ 186 (428)
.. -..+|+||...
T Consensus 189 ~~~l~~~DiVInaT 202 (283)
T 3jyo_A 189 EDVIAAADGVVNAT 202 (283)
T ss_dssp HHHHHHSSEEEECS
T ss_pred HHHHhcCCEEEECC
Confidence 11 14689999854
No 419
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=81.94 E-value=11 Score=34.66 Aligned_cols=81 Identities=21% Similarity=0.290 Sum_probs=49.3
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc
Q 014247 98 ETYRAAIMQNQSFIEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV 173 (428)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l 173 (428)
..+.+.+........+++||-+|+| |. .+..+++.|+++|+.++.+ +-++...+.+...+ .+... +..++
T Consensus 111 ~G~~~~L~~~~~~l~~k~vlvlGaG-g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~--~~~~l 184 (281)
T 3o8q_A 111 EGLVQDLLAQQVLLKGATILLIGAG-GAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQ--AFEQL 184 (281)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCS-HHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEE--EGGGC
T ss_pred HHHHHHHHHhCCCccCCEEEEECch-HHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEe--eHHHh
Confidence 3455556554334578999999997 32 3344555687799999988 55444333333221 24444 34444
Q ss_pred cCCCceeEEEEec
Q 014247 174 EIDEEVDVIISEW 186 (428)
Q Consensus 174 ~~~~~~DlVvs~~ 186 (428)
. ..+|+||+..
T Consensus 185 ~--~~aDiIInaT 195 (281)
T 3o8q_A 185 K--QSYDVIINST 195 (281)
T ss_dssp C--SCEEEEEECS
T ss_pred c--CCCCEEEEcC
Confidence 3 6799999854
No 420
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=81.88 E-value=4.6 Score=36.36 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=53.3
Q ss_pred CCCCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---------
Q 014247 109 SFIEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--------- 175 (428)
Q Consensus 109 ~~~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--------- 175 (428)
....+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+...+ .++.++.+|+.+...
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHH
Confidence 34678899999987763 4555666787 79999999 66666666555543 468999999876421
Q ss_pred --CCceeEEEEec
Q 014247 176 --DEEVDVIISEW 186 (428)
Q Consensus 176 --~~~~DlVvs~~ 186 (428)
-++.|+||.+.
T Consensus 102 ~~~g~id~lv~~A 114 (262)
T 3rkr_A 102 AAHGRCDVLVNNA 114 (262)
T ss_dssp HHHSCCSEEEECC
T ss_pred HhcCCCCEEEECC
Confidence 14689999864
No 421
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=81.87 E-value=4.5 Score=36.23 Aligned_cols=75 Identities=20% Similarity=0.244 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCC-CCCcEEEEEcccccccC----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANN-LTDKVIVLHGRVEDVEI---------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~-~~~~v~~~~~d~~~l~~---------- 175 (428)
..++++|-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+.... -..++.++.+|+.+...
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 467899999998874 5566677788 89999998 66666555544432 21458899999877421
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 84 ~~g~iD~lvnnA 95 (250)
T 3nyw_A 84 KYGAVDILVNAA 95 (250)
T ss_dssp HHCCEEEEEECC
T ss_pred hcCCCCEEEECC
Confidence 14799999864
No 422
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=81.86 E-value=4.7 Score=36.25 Aligned_cols=74 Identities=23% Similarity=0.265 Sum_probs=53.2
Q ss_pred CCCCEEEEEcC-CCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC----------
Q 014247 111 IEGKVVVDVGC-GTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI---------- 175 (428)
Q Consensus 111 ~~~~~VLDiGc-GtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~---------- 175 (428)
..+++||-.|+ |.|+ ++..+++.|+ +|+.++.+ +-+..+.+.+...+ ..++.++.+|+.+...
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 46789999998 6664 5667777788 79999998 66666655554433 2469999999877421
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
-+++|++|.+.
T Consensus 98 ~~g~id~li~~A 109 (266)
T 3o38_A 98 KAGRLDVLVNNA 109 (266)
T ss_dssp HHSCCCEEEECC
T ss_pred HhCCCcEEEECC
Confidence 04789999864
No 423
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=81.77 E-value=3.8 Score=36.76 Aligned_cols=73 Identities=15% Similarity=0.180 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----C-----
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-----D----- 176 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-----~----- 176 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+...+ .++.++.+|+.+... .
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 467899999998874 5666677788 89999998 66666655555543 468999999876421 0
Q ss_pred CceeEEEEec
Q 014247 177 EEVDVIISEW 186 (428)
Q Consensus 177 ~~~DlVvs~~ 186 (428)
++.|++|.+.
T Consensus 82 g~id~lv~nA 91 (252)
T 3h7a_A 82 APLEVTIFNV 91 (252)
T ss_dssp SCEEEEEECC
T ss_pred CCceEEEECC
Confidence 4789999754
No 424
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=81.53 E-value=13 Score=34.86 Aligned_cols=96 Identities=17% Similarity=0.091 Sum_probs=61.3
Q ss_pred CEEEEEcCCC--cHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHH-------HCCCCC----------cEEEEEcccccc
Q 014247 114 KVVVDVGCGT--GILSIFCAQAGAKRVYAVDAS-DIAVQANEVVK-------ANNLTD----------KVIVLHGRVEDV 173 (428)
Q Consensus 114 ~~VLDiGcGt--G~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~-------~~~~~~----------~v~~~~~d~~~l 173 (428)
.+|--||+|. +.++..++++|. +|++.|.+ +.++.+++.+. ..|+.. ++++. .|..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHHH
Confidence 5788999996 346677778888 79999999 87777765432 223211 24433 333322
Q ss_pred cCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 174 EIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 174 ~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
- ...|+|+... .........++.++...++|+.+++-.
T Consensus 85 v--~~aDlVieav----pe~~~~k~~v~~~l~~~~~~~~Ii~s~ 122 (319)
T 2dpo_A 85 V--EGVVHIQECV----PENLDLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp T--TTEEEEEECC----CSCHHHHHHHHHHHHTTCCSSSEEEEC
T ss_pred H--hcCCEEEEec----cCCHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 1 5689998743 112233567788888999998877633
No 425
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=81.31 E-value=6.5 Score=36.29 Aligned_cols=74 Identities=23% Similarity=0.212 Sum_probs=54.5
Q ss_pred CCCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC----------
Q 014247 110 FIEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI---------- 175 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~---------- 175 (428)
...+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+...+ .++.++.+|+.+...
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFR 104 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHH
Confidence 3578899999998874 5566677787 89999999 76666666665543 358999999877431
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
-+++|++|.+.
T Consensus 105 ~~g~id~lvnnA 116 (301)
T 3tjr_A 105 LLGGVDVVFSNA 116 (301)
T ss_dssp HHSSCSEEEECC
T ss_pred hCCCCCEEEECC
Confidence 14789999864
No 426
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=81.28 E-value=1.9 Score=47.10 Aligned_cols=69 Identities=19% Similarity=0.097 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCCcHHHHHHHHcCC-CeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc----------------
Q 014247 112 EGKVVVDVGCGTGILSIFCAQAGA-KRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV---------------- 173 (428)
Q Consensus 112 ~~~~VLDiGcGtG~ls~~la~~g~-~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l---------------- 173 (428)
...+++|+-||.|.+++-+.++|. ..|.++|++ ..+..-+.+. . ...++.+|+.++
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~-----p-~~~~~~~DI~~l~~~~~~~di~~~~~~~ 612 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN-----P-GSTVFTEDCNILLKLVMAGETTNSRGQR 612 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC-----T-TSEEECSCHHHHHHHHHHTCSBCTTCCB
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC-----C-CCccccccHHHHhhhccchhhhhhhhhh
Confidence 345899999999999999999997 678899999 5544433332 1 245666675432
Q ss_pred -cCCCceeEEEEec
Q 014247 174 -EIDEEVDVIISEW 186 (428)
Q Consensus 174 -~~~~~~DlVvs~~ 186 (428)
+..+.+|+|+..+
T Consensus 613 lp~~~~vDll~GGp 626 (1002)
T 3swr_A 613 LPQKGDVEMLCGGP 626 (1002)
T ss_dssp CCCTTTCSEEEECC
T ss_pred cccCCCeeEEEEcC
Confidence 1225799999855
No 427
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=81.26 E-value=4.5 Score=37.06 Aligned_cols=73 Identities=19% Similarity=0.258 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
.++++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+... ..++.++.+|+.+...
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 567899999988874 4566677788 89999998 6665555544332 3468999999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+++|++|.+.
T Consensus 103 ~g~iD~lVnnA 113 (283)
T 3v8b_A 103 FGHLDIVVANA 113 (283)
T ss_dssp HSCCCEEEECC
T ss_pred hCCCCEEEECC
Confidence 14799999864
No 428
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.16 E-value=6.1 Score=35.16 Aligned_cols=73 Identities=26% Similarity=0.309 Sum_probs=53.1
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+...+ .++.++.+|+.+...
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999988764 5666677788 79999999 76666655555443 468899999877421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+++|++|.+.
T Consensus 84 ~g~id~li~~A 94 (253)
T 3qiv_A 84 FGGIDYLVNNA 94 (253)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 04789999864
No 429
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=81.05 E-value=6.2 Score=35.63 Aligned_cols=71 Identities=20% Similarity=0.315 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC------CCcee
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI------DEEVD 180 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~------~~~~D 180 (428)
..|+++|--|.+.|+ .+..+++.|+ +|+.+|.+ . +.+.+.++..+ .++.++.+|+.+... .++.|
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFD 81 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCC
Confidence 678999999999885 5677888888 89999987 3 23334445544 358889999876422 26799
Q ss_pred EEEEec
Q 014247 181 VIISEW 186 (428)
Q Consensus 181 lVvs~~ 186 (428)
++|.+.
T Consensus 82 iLVNNA 87 (247)
T 4hp8_A 82 ILVNNA 87 (247)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999864
No 430
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=81.04 E-value=1.5 Score=42.24 Aligned_cols=98 Identities=20% Similarity=0.226 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCC-cHHH-HHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-CCceeEEEEec
Q 014247 111 IEGKVVVDVGCGT-GILS-IFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-DEEVDVIISEW 186 (428)
Q Consensus 111 ~~~~~VLDiGcGt-G~ls-~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-~~~~DlVvs~~ 186 (428)
.++++|+-+|+|. |... ..++..|+ +|+++|.+ .-++.+.+. .+. .+.....+..++.. -..+|+|+...
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~---~g~--~~~~~~~~~~~l~~~~~~~DvVi~~~ 237 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDV---FGG--RVITLTATEANIKKSVQHADLLIGAV 237 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH---TTT--SEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh---cCc--eEEEecCCHHHHHHHHhCCCEEEECC
Confidence 4578999999953 2222 22333477 89999999 655444332 222 23222222222211 14689998754
Q ss_pred chhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 187 MGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 187 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
. ........-+.+...+.+++||.++-.
T Consensus 238 g---~~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 238 L---VPGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp C----------CCSCHHHHTTSCTTCEEEEC
T ss_pred C---CCccccchhHHHHHHHhhcCCCEEEEE
Confidence 1 111000111234556778999987743
No 431
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=80.68 E-value=1.6 Score=42.00 Aligned_cols=90 Identities=13% Similarity=0.016 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCC--CcHHHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc------CCCcee
Q 014247 111 IEGKVVVDVGCG--TGILSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE------IDEEVD 180 (428)
Q Consensus 111 ~~~~~VLDiGcG--tG~ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~------~~~~~D 180 (428)
.+|.+||-+|++ .|.++..+|+. |+ +|+++. + +-.+.++ +.|.. .++...-.++. ..+.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~----~lGa~---~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAK----SRGAE---EVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHH----HTTCS---EEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHH----HcCCc---EEEECCCchHHHHHHHHccCCcc
Confidence 688999999983 67888888876 77 788885 5 5444443 34432 23322111110 124599
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhccc-ccCeEEEccC
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWL-KRGGLILPSY 218 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~L-kpgG~lv~~~ 218 (428)
+|+-.. .. ...+....+.| ++||+++...
T Consensus 234 ~v~d~~-----g~----~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 234 YALDCI-----TN----VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEEESS-----CS----HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEEECC-----Cc----hHHHHHHHHHhhcCCCEEEEEe
Confidence 999632 11 12344455667 6999887543
No 432
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=80.52 E-value=17 Score=33.27 Aligned_cols=88 Identities=22% Similarity=0.246 Sum_probs=53.2
Q ss_pred CEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEE--------c---ccccccC-CCc
Q 014247 114 KVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLH--------G---RVEDVEI-DEE 178 (428)
Q Consensus 114 ~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~--------~---d~~~l~~-~~~ 178 (428)
.+|+-||+|. | .++..+++.|. +|+.+|.+ +.++..++. + +.+.. . +..++.. -..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~----g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKN----G----LIADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHH----C----EEEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhC----C----EEEEeCCCeeEecceeecchhhcccCCC
Confidence 4789999985 2 35556666676 89999998 655443322 2 22211 0 1111110 027
Q ss_pred eeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 179 VDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 179 ~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
+|+|+... .......+++.+...|+++..++.
T Consensus 75 ~d~vi~~v------~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 75 VDLIIALT------KAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CSEEEECS------CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCEEEEEe------ccccHHHHHHHHHHhcCCCCEEEE
Confidence 89999743 123467788888888988876664
No 433
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=80.05 E-value=6.8 Score=35.59 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCC-CCcEEEEEcccccccC----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNL-TDKVIVLHGRVEDVEI---------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~-~~~v~~~~~d~~~l~~---------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+...+. ..++.++.+|+.+...
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 567899999988774 5566677788 89999998 666665555554432 2268999999876421
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 88 ~~g~id~lv~nA 99 (281)
T 3svt_A 88 WHGRLHGVVHCA 99 (281)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 14789999854
No 434
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=79.72 E-value=4.3 Score=37.63 Aligned_cols=87 Identities=16% Similarity=0.210 Sum_probs=52.5
Q ss_pred CCEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 113 GKVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 113 ~~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
..+|.-||+|. | .++..+++.|. +|++.|.+ +.++.+.+ .+. .....+..+.- ...|+|+...
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~----~g~----~~~~~~~~e~~--~~aDvvi~~v--- 72 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLA----EGA----CGAAASAREFA--GVVDALVILV--- 72 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTC----SEEESSSTTTT--TTCSEEEECC---
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHH----cCC----ccccCCHHHHH--hcCCEEEEEC---
Confidence 35799999986 2 35566677777 89999999 65544332 232 11233433322 5679999743
Q ss_pred hhcchhhHHHHH---HHHhcccccCeEEE
Q 014247 190 MLLYESMLGSVI---TARDRWLKRGGLIL 215 (428)
Q Consensus 190 ~l~~~~~~~~~l---~~~~~~LkpgG~lv 215 (428)
........++ +.+...|++|..++
T Consensus 73 --p~~~~~~~v~~~~~~l~~~l~~g~ivv 99 (303)
T 3g0o_A 73 --VNAAQVRQVLFGEDGVAHLMKPGSAVM 99 (303)
T ss_dssp --SSHHHHHHHHC--CCCGGGSCTTCEEE
T ss_pred --CCHHHHHHHHhChhhHHhhCCCCCEEE
Confidence 2222345555 55567788887665
No 435
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=79.71 E-value=0.91 Score=43.22 Aligned_cols=95 Identities=14% Similarity=0.134 Sum_probs=54.7
Q ss_pred HHhccCCCCCCEEEEEcCC--CcHHHHHHHHc-CCCeEEEEeChHHHHHHHHHHHHCCCCCcEEEEEcc--c----cccc
Q 014247 104 IMQNQSFIEGKVVVDVGCG--TGILSIFCAQA-GAKRVYAVDASDIAVQANEVVKANNLTDKVIVLHGR--V----EDVE 174 (428)
Q Consensus 104 i~~~~~~~~~~~VLDiGcG--tG~ls~~la~~-g~~~V~giD~s~~~~~a~~~~~~~~~~~~v~~~~~d--~----~~l~ 174 (428)
+.+.....+|.+||-.|++ .|.++..+|+. |..+|++++.+.-.+.++ .+.. .++..+ . .++
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~~-----~ga~---~~~~~~~~~~~~~~~~- 204 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIK-----DSVT---HLFDRNADYVQEVKRI- 204 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGHHHHG-----GGSS---EEEETTSCHHHHHHHH-
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHH-----cCCc---EEEcCCccHHHHHHHh-
Confidence 3344566889999999983 46677777775 566899998544333332 2322 222211 1 111
Q ss_pred CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 175 IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 175 ~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.++.+|+|+-.. + .. . +....++|+++|+++..
T Consensus 205 ~~~g~Dvv~d~~-g----~~----~-~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 205 SAEGVDIVLDCL-C----GD----N-TGKGLSLLKPLGTYILY 237 (349)
T ss_dssp CTTCEEEEEEEC-C----------------CTTEEEEEEEEEE
T ss_pred cCCCceEEEECC-C----ch----h-HHHHHHHhhcCCEEEEE
Confidence 135799999643 1 11 1 25567899999998854
No 436
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=79.59 E-value=7.1 Score=35.16 Aligned_cols=75 Identities=21% Similarity=0.252 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|. ++..+++.|+ +|+.++.+ +.++.+.+.+.......++.++.+|+.+...
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999988764 4556666787 89999998 6555544444432112358889999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+++|++|.+.
T Consensus 90 ~g~id~lv~nA 100 (267)
T 1iy8_A 90 FGRIDGFFNNA 100 (267)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 04789999864
No 437
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=79.35 E-value=6.5 Score=35.26 Aligned_cols=73 Identities=23% Similarity=0.305 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +-++.+.+.+...+ .++.++.+|+.+...
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 568899999988874 4566677788 79999998 66666666555543 458999999877421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 87 ~g~id~lv~nA 97 (256)
T 3gaf_A 87 FGKITVLVNNA 97 (256)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999864
No 438
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=79.26 E-value=1.1 Score=43.21 Aligned_cols=98 Identities=20% Similarity=0.180 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCCC-cHHHHHHH-HcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-CCceeEEEEec
Q 014247 111 IEGKVVVDVGCGT-GILSIFCA-QAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-DEEVDVIISEW 186 (428)
Q Consensus 111 ~~~~~VLDiGcGt-G~ls~~la-~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-~~~~DlVvs~~ 186 (428)
.++++|+-+|+|. |......+ ..|+ +|+++|.+ .-++.+++.. +. .+.....+..++.. -..+|+|+...
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~l~~~l~~aDvVi~~~ 239 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYELEGAVKRADLVIGAV 239 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHHHHHHHcCCCEEEECC
Confidence 4688999999964 33222233 3477 89999999 6555544322 22 12222111111110 14689999743
Q ss_pred chhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 187 MGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 187 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
. ........-+.++..+.|+|||+++-.
T Consensus 240 ~---~p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 240 L---VPGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp C---CTTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred C---cCCCCCcceecHHHHhcCCCCcEEEEE
Confidence 1 110000011123455678999988743
No 439
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=79.06 E-value=3.8 Score=37.00 Aligned_cols=73 Identities=22% Similarity=0.271 Sum_probs=44.5
Q ss_pred CCEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeChH--------------------HHHHHHHHHHHCCCCCcEEEEEccc
Q 014247 113 GKVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDASD--------------------IAVQANEVVKANNLTDKVIVLHGRV 170 (428)
Q Consensus 113 ~~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s~--------------------~~~~a~~~~~~~~~~~~v~~~~~d~ 170 (428)
+++||-+|||. | ..+..|++.|.++++.+|.+. -++.+.+.+...+..-+++.+..++
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 46899999983 3 355667777998999998763 3444545554432222355555444
Q ss_pred ccccC---CCceeEEEEe
Q 014247 171 EDVEI---DEEVDVIISE 185 (428)
Q Consensus 171 ~~l~~---~~~~DlVvs~ 185 (428)
..... -..+|+|+..
T Consensus 111 ~~~~~~~~~~~~DvVi~~ 128 (249)
T 1jw9_B 111 DDAELAALIAEHDLVLDC 128 (249)
T ss_dssp CHHHHHHHHHTSSEEEEC
T ss_pred CHhHHHHHHhCCCEEEEe
Confidence 32111 1579999974
No 440
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=79.00 E-value=15 Score=33.84 Aligned_cols=94 Identities=16% Similarity=0.256 Sum_probs=58.1
Q ss_pred CEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHH-------HCCC-C-------------CcEEEEEcc
Q 014247 114 KVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVK-------ANNL-T-------------DKVIVLHGR 169 (428)
Q Consensus 114 ~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~-------~~~~-~-------------~~v~~~~~d 169 (428)
++|.-||+|. | .++..+++.|. +|+.+|.+ +.++.+++.+. ..+. . .++.+. .|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~-~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS-TD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE-SC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe-cC
Confidence 5799999996 3 36677777787 89999999 77766544332 1221 1 123332 33
Q ss_pred cccccCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEE
Q 014247 170 VEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 170 ~~~l~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
..+. -...|+|+... -........++.++...++|+.+++
T Consensus 94 ~~~~--~~~aD~Vi~av----p~~~~~~~~v~~~l~~~~~~~~iv~ 133 (302)
T 1f0y_A 94 AASV--VHSTDLVVEAI----VENLKVKNELFKRLDKFAAEHTIFA 133 (302)
T ss_dssp HHHH--TTSCSEEEECC----CSCHHHHHHHHHHHTTTSCTTCEEE
T ss_pred HHHh--hcCCCEEEEcC----cCcHHHHHHHHHHHHhhCCCCeEEE
Confidence 3321 14689999743 1112224567788888888887665
No 441
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=78.78 E-value=11 Score=33.98 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=53.0
Q ss_pred EEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchhhh
Q 014247 115 VVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGYML 191 (428)
Q Consensus 115 ~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~~l 191 (428)
+|.=||||. | .++..+++.|. +|+++|.+ +.++.+. ..+... . ...+..+. ...|+|+....
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~----~~g~~~--~-~~~~~~~~---~~~D~vi~av~---- 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAV----ERQLVD--E-AGQDLSLL---QTAKIIFLCTP---- 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH----HTTSCS--E-EESCGGGG---TTCSEEEECSC----
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH----hCCCCc--c-ccCCHHHh---CCCCEEEEECC----
Confidence 578899886 2 34555666676 89999998 6554432 334322 1 23344443 46899997431
Q ss_pred cchhhHHHHHHHHhcccccCeEEE
Q 014247 192 LYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 192 ~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
......++..+...++++..++
T Consensus 67 --~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 67 --IQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp --HHHHHHHHHHHGGGSCTTCEEE
T ss_pred --HHHHHHHHHHHHhhCCCCCEEE
Confidence 2346677888888888887665
No 442
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=78.58 E-value=10 Score=34.70 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=58.7
Q ss_pred CEEEEEcCCC--cHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHC---------CCC--------CcEEEEEcccccc
Q 014247 114 KVVVDVGCGT--GILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKAN---------NLT--------DKVIVLHGRVEDV 173 (428)
Q Consensus 114 ~~VLDiGcGt--G~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~---------~~~--------~~v~~~~~d~~~l 173 (428)
++|.-||+|. +.++..+++.|. +|+.+|.+ +.++.+.+.+... ++. .++.+ ..|..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 5788899986 235666677787 89999999 7777766543211 111 11232 2333322
Q ss_pred cCCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEE
Q 014247 174 EIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 174 ~~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
- ...|+|+... .........+++++...++|+.+++
T Consensus 83 ~--~~aDlVi~av----~~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 V--KDADLVIEAV----PESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp T--TTCSEEEECC----CSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred h--ccCCEEEEec----cCcHHHHHHHHHHHHhhCCCCcEEE
Confidence 1 4689999743 2222346677888888899988776
No 443
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=78.50 E-value=1.1 Score=42.97 Aligned_cols=93 Identities=22% Similarity=0.203 Sum_probs=53.6
Q ss_pred cCCCCCCEEEEEcCCC-cHHHHHHHH-c-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcc------cccccCCC
Q 014247 108 QSFIEGKVVVDVGCGT-GILSIFCAQ-A-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGR------VEDVEIDE 177 (428)
Q Consensus 108 ~~~~~~~~VLDiGcGt-G~ls~~la~-~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d------~~~l~~~~ 177 (428)
....++.+||-+|+|. |.++..+|+ . |+ +|+++|.+ +-.+.+++ .|.. .++... +.++....
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~v~~~~~g~ 253 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAER----LGAD---HVVDARRDPVKQVMELTRGR 253 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHH----TTCS---EEEETTSCHHHHHHHHTTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHH----hCCC---EEEeccchHHHHHHHHhCCC
Confidence 4567899999999862 445555665 4 66 89999998 66655543 3432 222211 11222223
Q ss_pred ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 178 EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
.+|+|+-.. + ... ...+....++ ++|+++..
T Consensus 254 g~Dvvid~~-G----~~~--~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 254 GVNVAMDFV-G----SQA--TVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp CEEEEEESS-C----CHH--HHHHGGGGEE--EEEEEEEC
T ss_pred CCcEEEECC-C----Cch--HHHHHHHhhc--CCCEEEEE
Confidence 799999632 1 111 0134444555 89988753
No 444
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=78.34 E-value=5.6 Score=36.41 Aligned_cols=74 Identities=19% Similarity=0.208 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc-cC----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV-EI---------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l-~~---------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|++++.+ .-...+.+.+...+- .++.++.+|+.+. ..
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHH
Confidence 457889999988764 4556666788 89999998 666665555554432 3699999998875 21
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
.+++|++|.+.
T Consensus 88 ~~g~iD~lv~nA 99 (311)
T 3o26_A 88 HFGKLDILVNNA 99 (311)
T ss_dssp HHSSCCEEEECC
T ss_pred hCCCCCEEEECC
Confidence 14799999865
No 445
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=78.18 E-value=0.73 Score=44.57 Aligned_cols=40 Identities=23% Similarity=0.395 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCC-cHHHHHHHH-cCCCeEEEEeCh-HHHHHHHH
Q 014247 112 EGKVVVDVGCGT-GILSIFCAQ-AGAKRVYAVDAS-DIAVQANE 152 (428)
Q Consensus 112 ~~~~VLDiGcGt-G~ls~~la~-~g~~~V~giD~s-~~~~~a~~ 152 (428)
++.+|+-+|+|. |..+...++ .|+ +|+++|.+ ..++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 678999999985 444333333 488 89999999 65555443
No 446
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=78.01 E-value=4 Score=37.40 Aligned_cols=74 Identities=19% Similarity=0.241 Sum_probs=48.9
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+...+- ..+.++.+|+.+...
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGDPDQVAALFAAVRAE 108 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567899999988764 4556667788 89999998 665555544443322 236889999876431
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+++|++|.+.
T Consensus 109 ~g~iD~lvnnA 119 (281)
T 4dry_A 109 FARLDLLVNNA 119 (281)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 15789999864
No 447
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.98 E-value=5.4 Score=33.64 Aligned_cols=90 Identities=16% Similarity=0.135 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCC-cH-HHHHHHHc-CCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc----cC--CCceeE
Q 014247 112 EGKVVVDVGCGT-GI-LSIFCAQA-GAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV----EI--DEEVDV 181 (428)
Q Consensus 112 ~~~~VLDiGcGt-G~-ls~~la~~-g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l----~~--~~~~Dl 181 (428)
.+.+|+-+|||. |. ++..|.+. |. +|+++|.+ +.++.++ ..+ +.++.+|..+. .. -..+|+
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~----~~g----~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHR----SEG----RNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHH----HTT----CCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHH----HCC----CCEEEcCCCCHHHHHhccCCCCCCE
Confidence 356899999874 32 34445555 76 79999999 6554433 222 45666776432 11 256899
Q ss_pred EEEecchhhhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 182 IISEWMGYMLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 182 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
|+... ........++. ..+.+.|++.++.
T Consensus 109 vi~~~-----~~~~~~~~~~~-~~~~~~~~~~ii~ 137 (183)
T 3c85_A 109 VLLAM-----PHHQGNQTALE-QLQRRNYKGQIAA 137 (183)
T ss_dssp EEECC-----SSHHHHHHHHH-HHHHTTCCSEEEE
T ss_pred EEEeC-----CChHHHHHHHH-HHHHHCCCCEEEE
Confidence 98732 11121222222 3344566666663
No 448
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=77.82 E-value=7.1 Score=35.53 Aligned_cols=73 Identities=15% Similarity=0.154 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|++++.+ +.++.+.+.+...+ .++.++.+|+.+...
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 457899999988774 5566677788 79999998 66666555555433 458999999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 99 ~g~id~lv~nA 109 (279)
T 3sju_A 99 FGPIGILVNSA 109 (279)
T ss_dssp HCSCCEEEECC
T ss_pred cCCCcEEEECC
Confidence 14789999864
No 449
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=77.63 E-value=7.5 Score=34.40 Aligned_cols=73 Identities=23% Similarity=0.286 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|. ++..+++.|+ +|++++.+ ...+...+.+...+ .++.++.+|+.+...
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHH
Confidence 357889999987764 5566677787 89999998 66666666665554 358999999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
.+++|+++.+.
T Consensus 80 ~~~id~li~~A 90 (247)
T 3lyl_A 80 NLAIDILVNNA 90 (247)
T ss_dssp TCCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 14689999864
No 450
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=77.53 E-value=7.1 Score=35.35 Aligned_cols=72 Identities=17% Similarity=0.167 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------C
Q 014247 112 EGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-----------D 176 (428)
Q Consensus 112 ~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-----------~ 176 (428)
.+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+...+ .++.++.+|+.+... -
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46789999988774 5566677788 79999998 66666666555543 468889999876421 1
Q ss_pred CceeEEEEec
Q 014247 177 EEVDVIISEW 186 (428)
Q Consensus 177 ~~~DlVvs~~ 186 (428)
++.|++|.+.
T Consensus 80 g~iD~lVnnA 89 (264)
T 3tfo_A 80 GRIDVLVNNA 89 (264)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4789999864
No 451
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=77.33 E-value=6.6 Score=35.34 Aligned_cols=74 Identities=26% Similarity=0.254 Sum_probs=52.7
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +-++.+.+.+...+- .++.++.+|+.+...
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGS-GKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSS-SCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567899999988764 4566667788 89999999 666665555554432 358999999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 86 ~g~id~lvnnA 96 (262)
T 3pk0_A 86 FGGIDVVCANA 96 (262)
T ss_dssp HSCCSEEEECC
T ss_pred hCCCCEEEECC
Confidence 14789999864
No 452
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=76.60 E-value=7 Score=35.44 Aligned_cols=69 Identities=12% Similarity=0.122 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC----------C
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------D 176 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------~ 176 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+ ..++.++.+|+.+... .
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAANQL 101 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHTTS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 467899999988874 5566677788 89999998 6555544433 2468999999876421 1
Q ss_pred CceeEEEEe
Q 014247 177 EEVDVIISE 185 (428)
Q Consensus 177 ~~~DlVvs~ 185 (428)
+..|+++.+
T Consensus 102 ~~id~lv~~ 110 (281)
T 3ppi_A 102 GRLRYAVVA 110 (281)
T ss_dssp SEEEEEEEC
T ss_pred CCCCeEEEc
Confidence 578988876
No 453
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=76.37 E-value=13 Score=34.02 Aligned_cols=80 Identities=15% Similarity=0.191 Sum_probs=47.1
Q ss_pred HHHHH-HHhccCCCCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccc
Q 014247 99 TYRAA-IMQNQSFIEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDV 173 (428)
Q Consensus 99 ~~~~~-i~~~~~~~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l 173 (428)
.+... +........++++|-+|+| |. .+..+++.|+++|+.++.+ +-++...+.+.. ..+... +..++
T Consensus 105 G~~~~lL~~~~~~l~~k~~lvlGaG-g~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~--~~~~l 177 (272)
T 3pwz_A 105 GLLRDIEENLGEPLRNRRVLLLGAG-GAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRIS--RYEAL 177 (272)
T ss_dssp HHHHHHHTTSCCCCTTSEEEEECCS-HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEE--CSGGG
T ss_pred HHHHHHHHHcCCCccCCEEEEECcc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEe--eHHHh
Confidence 45555 4333223578999999997 32 3445566687899999988 544433332221 124444 33444
Q ss_pred cCCCceeEEEEec
Q 014247 174 EIDEEVDVIISEW 186 (428)
Q Consensus 174 ~~~~~~DlVvs~~ 186 (428)
.. ..+|+||+..
T Consensus 178 ~~-~~~DivInaT 189 (272)
T 3pwz_A 178 EG-QSFDIVVNAT 189 (272)
T ss_dssp TT-CCCSEEEECS
T ss_pred cc-cCCCEEEECC
Confidence 32 6799999854
No 454
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=76.17 E-value=7.4 Score=34.49 Aligned_cols=71 Identities=14% Similarity=0.270 Sum_probs=49.7
Q ss_pred CCCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-------CCc
Q 014247 110 FIEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-------DEE 178 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-------~~~ 178 (428)
..++++||-.|++.|. ++..+++.|+ +|+.++.+ +.++...+.+ ..++.++.+|+.+... -++
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISKTSN 84 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHTCSC
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHhcCC
Confidence 4678899999988764 4566667787 89999998 6555444333 2358889888876321 157
Q ss_pred eeEEEEec
Q 014247 179 VDVIISEW 186 (428)
Q Consensus 179 ~DlVvs~~ 186 (428)
.|+++.+.
T Consensus 85 id~li~~A 92 (249)
T 3f9i_A 85 LDILVCNA 92 (249)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999864
No 455
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=75.83 E-value=3.6 Score=33.07 Aligned_cols=64 Identities=20% Similarity=0.169 Sum_probs=41.6
Q ss_pred CCEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----CCceeEEEE
Q 014247 113 GKVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-----DEEVDVIIS 184 (428)
Q Consensus 113 ~~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-----~~~~DlVvs 184 (428)
.++|+-+|||. | .++..+++.|. +|+++|.+ +.++.+++ . .+.++.+|..+... ...+|+|+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~----~----~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLED----E----GFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----T----TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHH----C----CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 45799999965 2 23444455577 89999999 66554432 2 26778888766321 257899887
Q ss_pred e
Q 014247 185 E 185 (428)
Q Consensus 185 ~ 185 (428)
.
T Consensus 77 ~ 77 (141)
T 3llv_A 77 T 77 (141)
T ss_dssp C
T ss_pred e
Confidence 4
No 456
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=75.81 E-value=13 Score=33.49 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=50.7
Q ss_pred CCCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC----------
Q 014247 110 FIEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI---------- 175 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~---------- 175 (428)
...+++||-.|++.|+ ++..+++.|+ +|++++.+ ...+...+.+...+ .++.++.+|+.+...
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 3567899999987653 4455566677 89999998 65555555454433 358999999876421
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
-+.+|+||.+.
T Consensus 105 ~~g~iD~li~~A 116 (272)
T 1yb1_A 105 EIGDVSILVNNA 116 (272)
T ss_dssp HTCCCSEEEECC
T ss_pred HCCCCcEEEECC
Confidence 14789999854
No 457
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=75.59 E-value=5.9 Score=35.52 Aligned_cols=73 Identities=19% Similarity=0.338 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+.. ...++.++.+|+.+...
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQ--FPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCC--STTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999988764 4566677788 79999999 666665555433 23468999999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 81 ~g~id~lv~nA 91 (257)
T 3imf_A 81 FGRIDILINNA 91 (257)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999754
No 458
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=75.53 E-value=22 Score=32.98 Aligned_cols=90 Identities=18% Similarity=0.148 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCC--cHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCC---CcEEE-----EEcccccccCCCcee
Q 014247 112 EGKVVVDVGCGT--GILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLT---DKVIV-----LHGRVEDVEIDEEVD 180 (428)
Q Consensus 112 ~~~~VLDiGcGt--G~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~---~~v~~-----~~~d~~~l~~~~~~D 180 (428)
...+|+-||+|. +.++..+++.|. .|+.+ .+ +.++..++ .++. ....+ ...|... -..+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~----~g~~~~~~~~~~~~~~~~~~~~~~---~~~~D 88 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEA----TGLRLETQSFDEQVKVSASSDPSA---VQGAD 88 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHH----HCEEEECSSCEEEECCEEESCGGG---GTTCS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHh----CCeEEEcCCCcEEEeeeeeCCHHH---cCCCC
Confidence 447899999996 246667777776 89999 77 55544433 2221 00011 0112222 15789
Q ss_pred EEEEecchhhhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 181 VIISEWMGYMLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 181 lVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
+|+... .......+++.+...|+++..++.
T Consensus 89 ~vilav------k~~~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 89 LVLFCV------KSTDTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp EEEECC------CGGGHHHHHHHHTTTSCTTCEEEE
T ss_pred EEEEEc------ccccHHHHHHHHHHhcCCCCEEEE
Confidence 998743 223478888999999999877663
No 459
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=75.33 E-value=11 Score=34.08 Aligned_cols=74 Identities=22% Similarity=0.263 Sum_probs=52.2
Q ss_pred CCCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeC-------------h-HHHHHHHHHHHHCCCCCcEEEEEccccc
Q 014247 110 FIEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDA-------------S-DIAVQANEVVKANNLTDKVIVLHGRVED 172 (428)
Q Consensus 110 ~~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~-------------s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 172 (428)
...+++||-.|++.|+ ++..+++.|+ +|+++|. + +.++.+.+.+...+ .++.++.+|+.+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRD 88 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCC
Confidence 3678899999998875 5666777788 8999987 5 55555555554433 468899999876
Q ss_pred ccC-----------CCceeEEEEec
Q 014247 173 VEI-----------DEEVDVIISEW 186 (428)
Q Consensus 173 l~~-----------~~~~DlVvs~~ 186 (428)
... -++.|++|.+.
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECC
Confidence 421 14789999864
No 460
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=75.27 E-value=1.9 Score=39.56 Aligned_cols=50 Identities=12% Similarity=-0.090 Sum_probs=32.4
Q ss_pred EcccccccCCCceeEEEEecc----hhh----hcchhhHHHHHHHHhcccccCeEEEc
Q 014247 167 HGRVEDVEIDEEVDVIISEWM----GYM----LLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 167 ~~d~~~l~~~~~~DlVvs~~~----~~~----l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
.+|+..-...+++|+|+|+.- ++- ..|...+..+++-+..+|+|||.++.
T Consensus 195 ~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~ 252 (320)
T 2hwk_A 195 RLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVS 252 (320)
T ss_dssp CGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEE
T ss_pred ccccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEE
Confidence 455554333378999999752 111 33333344567777899999999984
No 461
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=75.04 E-value=14 Score=36.63 Aligned_cols=98 Identities=12% Similarity=0.146 Sum_probs=60.2
Q ss_pred CEEEEEcCCC--cHHHHHHHHcCCCeEEEEeCh-HHH-HHHH---HHHHHCCC-C--------CcEEEEEcccccccCCC
Q 014247 114 KVVVDVGCGT--GILSIFCAQAGAKRVYAVDAS-DIA-VQAN---EVVKANNL-T--------DKVIVLHGRVEDVEIDE 177 (428)
Q Consensus 114 ~~VLDiGcGt--G~ls~~la~~g~~~V~giD~s-~~~-~~a~---~~~~~~~~-~--------~~v~~~~~d~~~l~~~~ 177 (428)
++|.-||+|+ +.++..++++|. .|+.+|.+ +.. ...+ +.+.+.+. . .++++. .|...+ .
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl~al---~ 129 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDFHKL---S 129 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCGGGC---T
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCHHHH---c
Confidence 6899999997 356777888888 89999999 511 1111 11122221 1 234443 344322 5
Q ss_pred ceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCe
Q 014247 178 EVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYAT 220 (428)
Q Consensus 178 ~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 220 (428)
..|+||... .........+++++...++|+.+++-.+.+
T Consensus 130 ~aDlVIeAV----pe~~~vk~~v~~~l~~~~~~~aIlasnTSs 168 (460)
T 3k6j_A 130 NCDLIVESV----IEDMKLKKELFANLENICKSTCIFGTNTSS 168 (460)
T ss_dssp TCSEEEECC----CSCHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred cCCEEEEcC----CCCHHHHHHHHHHHHhhCCCCCEEEecCCC
Confidence 689999743 222333567788899999999988644443
No 462
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=74.92 E-value=8 Score=34.76 Aligned_cols=74 Identities=16% Similarity=0.150 Sum_probs=52.7
Q ss_pred CCCCEEEEEcCCC--cH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC---------
Q 014247 111 IEGKVVVDVGCGT--GI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI--------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGt--G~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~--------- 175 (428)
.+|+++|--|+++ |+ .+..+++.|+ +|+.++.+ +.++.+.+.+++.+- .++.++.+|+.+...
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHHHH
Confidence 6789999999643 42 5677788898 89999998 666666666554332 257888999876421
Q ss_pred --CCceeEEEEec
Q 014247 176 --DEEVDVIISEW 186 (428)
Q Consensus 176 --~~~~DlVvs~~ 186 (428)
-++.|+++.+.
T Consensus 82 ~~~G~iD~lvnnA 94 (256)
T 4fs3_A 82 KDVGNIDGVYHSI 94 (256)
T ss_dssp HHHCCCSEEEECC
T ss_pred HHhCCCCEEEecc
Confidence 16899998763
No 463
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=74.80 E-value=1.5 Score=42.78 Aligned_cols=40 Identities=28% Similarity=0.344 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCC-cHHHHHHHH-cCCCeEEEEeCh-HHHHHHHH
Q 014247 112 EGKVVVDVGCGT-GILSIFCAQ-AGAKRVYAVDAS-DIAVQANE 152 (428)
Q Consensus 112 ~~~~VLDiGcGt-G~ls~~la~-~g~~~V~giD~s-~~~~~a~~ 152 (428)
++.+|+-+|+|. |..+..+++ .|+ +|+++|.+ ..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH
Confidence 578999999985 444444444 487 89999999 65555443
No 464
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=74.70 E-value=20 Score=32.63 Aligned_cols=83 Identities=14% Similarity=0.215 Sum_probs=52.6
Q ss_pred CEEEEEcC-CC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 114 KVVVDVGC-GT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 114 ~~VLDiGc-Gt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
.+|.=||+ |. | .++..+++.|. +|+++|.+ +.++.+.+ .+. .+ .+..+. -...|+|+...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~----~g~----~~--~~~~~~--~~~aDvVi~av--- 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQG----MGI----PL--TDGDGW--IDEADVVVLAL--- 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHH----TTC----CC--CCSSGG--GGTCSEEEECS---
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHh----cCC----Cc--CCHHHH--hcCCCEEEEcC---
Confidence 48999999 85 2 35556666776 89999998 65544432 332 11 122221 15689999743
Q ss_pred hhcchhhHHHHHHHHhcccccCeEEE
Q 014247 190 MLLYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 190 ~l~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
.......++..+...|++|..++
T Consensus 76 ---~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 76 ---PDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ---CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred ---CchHHHHHHHHHHHhCCCCCEEE
Confidence 12236777888888888887665
No 465
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=74.63 E-value=27 Score=27.23 Aligned_cols=65 Identities=23% Similarity=0.418 Sum_probs=38.1
Q ss_pred CCEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccccccc----C-CCceeEEEE
Q 014247 113 GKVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVE----I-DEEVDVIIS 184 (428)
Q Consensus 113 ~~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~----~-~~~~DlVvs 184 (428)
+++|+-+|+|. | .++..+++.|. +|+++|.+ +.++.+.+ .. .+.++.+|..+.. . ...+|+|+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~---~~----~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASA---EI----DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH---HC----SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHH---hc----CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 46899998864 2 13334445565 89999998 55443322 21 2456667654321 1 257899987
Q ss_pred e
Q 014247 185 E 185 (428)
Q Consensus 185 ~ 185 (428)
.
T Consensus 76 ~ 76 (140)
T 1lss_A 76 V 76 (140)
T ss_dssp C
T ss_pred e
Confidence 4
No 466
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=74.50 E-value=1.8 Score=40.76 Aligned_cols=58 Identities=19% Similarity=0.115 Sum_probs=39.7
Q ss_pred CcEEEE-Ecccccc-c-C-CCceeEEEEecchhhh--------cchhhHHHHHHHHhcccccCeEEEccC
Q 014247 161 DKVIVL-HGRVEDV-E-I-DEEVDVIISEWMGYML--------LYESMLGSVITARDRWLKRGGLILPSY 218 (428)
Q Consensus 161 ~~v~~~-~~d~~~l-~-~-~~~~DlVvs~~~~~~l--------~~~~~~~~~l~~~~~~LkpgG~lv~~~ 218 (428)
....++ ++|..+. . + .++||+|++.+.-... .+...+...+.++.++|+|||.+++..
T Consensus 37 ~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp CEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 346777 9998653 1 2 3689999998742211 122246677888899999999998753
No 467
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=74.37 E-value=7.7 Score=35.28 Aligned_cols=73 Identities=21% Similarity=0.299 Sum_probs=52.7
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++...+.+...+ .++.++.+|+.+...
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 568899999998774 5666777788 89999988 66665555555543 358889999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 107 ~g~iD~lvnnA 117 (276)
T 3r1i_A 107 LGGIDIAVCNA 117 (276)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 04789999864
No 468
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=74.15 E-value=14 Score=32.79 Aligned_cols=73 Identities=25% Similarity=0.272 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..++++|-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+...+ .++.++.+|+.+...
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 457899999988764 4556666787 89999998 66655555554433 358889999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+.+|++|.+.
T Consensus 82 ~g~id~lv~nA 92 (247)
T 2jah_A 82 LGGLDILVNNA 92 (247)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 04789999854
No 469
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=74.12 E-value=8.3 Score=34.75 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=25.4
Q ss_pred CCCEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeC
Q 014247 112 EGKVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDA 143 (428)
Q Consensus 112 ~~~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~ 143 (428)
.+.+||-+|||. | ..+..|++.|.++++.+|.
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~ 60 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADD 60 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeC
Confidence 357999999984 4 3566778889999999975
No 470
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=73.90 E-value=14 Score=32.81 Aligned_cols=73 Identities=25% Similarity=0.330 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|. ++..+++.|+ +|++++.+ .......+.++..+ .++.++.+|+.+...
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHH
Confidence 457899999987653 4455566677 89999998 65555444444433 358999999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
.+++|+||.+.
T Consensus 88 ~~~id~vi~~A 98 (260)
T 3awd_A 88 EGRVDILVACA 98 (260)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 03689999754
No 471
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=73.88 E-value=13 Score=33.60 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|++++.+ +.++.+.+.+...+ .++.++.+|+.+...
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 457899999988764 4555666787 89999998 65555444444433 358889999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+.+|++|.+.
T Consensus 97 ~g~iD~lv~~A 107 (277)
T 2rhc_B 97 YGPVDVLVNNA 107 (277)
T ss_dssp TCSCSEEEECC
T ss_pred hCCCCEEEECC
Confidence 14789999854
No 472
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=73.80 E-value=8.9 Score=34.12 Aligned_cols=70 Identities=21% Similarity=0.325 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+ ..++.++.+|+.+...
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 568899999988874 5666777788 89999998 6555443333 2358899999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 78 ~g~id~lv~nA 88 (247)
T 3rwb_A 78 TGGIDILVNNA 88 (247)
T ss_dssp HSCCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 14789999854
No 473
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=73.74 E-value=12 Score=33.92 Aligned_cols=83 Identities=17% Similarity=0.073 Sum_probs=50.9
Q ss_pred EEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchhhh
Q 014247 115 VVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGYML 191 (428)
Q Consensus 115 ~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~~l 191 (428)
+|.=||+|. | .++..+++ |. +|+.+|.+ +.++.+.+. +. .... ..+. -...|+|+...
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~----g~----~~~~--~~~~--~~~~D~vi~~v----- 63 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEE----FG----SEAV--PLER--VAEARVIFTCL----- 63 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHH----HC----CEEC--CGGG--GGGCSEEEECC-----
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHC----CC----cccC--HHHH--HhCCCEEEEeC-----
Confidence 577889986 3 34556666 77 79999998 665544332 22 1211 2221 14689999743
Q ss_pred cchhhHHHHHHHHhcccccCeEEEc
Q 014247 192 LYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 192 ~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
........+++.+...|++|..++.
T Consensus 64 ~~~~~~~~v~~~l~~~l~~~~~vv~ 88 (289)
T 2cvz_A 64 PTTREVYEVAEALYPYLREGTYWVD 88 (289)
T ss_dssp SSHHHHHHHHHHHTTTCCTTEEEEE
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEE
Confidence 2222356677778788888887663
No 474
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=73.46 E-value=8.3 Score=38.56 Aligned_cols=86 Identities=23% Similarity=0.275 Sum_probs=49.9
Q ss_pred CCCCCEEEEEcCCC-cHHHHHHHH-cCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEec
Q 014247 110 FIEGKVVVDVGCGT-GILSIFCAQ-AGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEW 186 (428)
Q Consensus 110 ~~~~~~VLDiGcGt-G~ls~~la~-~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~ 186 (428)
..+|++|+-+|+|. |.....+++ .|+ +|+++|.+ .-+..|+ ..|. .+ .++.++- ..+|+|+...
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~----~~Ga----~~--~~l~e~l--~~aDvVi~at 337 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAM----MEGF----DV--VTVEEAI--GDADIVVTAT 337 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH----HTTC----EE--CCHHHHG--GGCSEEEECS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH----HcCC----EE--ecHHHHH--hCCCEEEECC
Confidence 46899999999874 333333333 477 89999999 5444443 2332 22 2333321 5689999743
Q ss_pred chhhhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 187 MGYMLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 187 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
+ ....+. ....+.||+||+++-
T Consensus 338 -g----t~~~i~---~~~l~~mk~ggilvn 359 (494)
T 3ce6_A 338 -G----NKDIIM---LEHIKAMKDHAILGN 359 (494)
T ss_dssp -S----SSCSBC---HHHHHHSCTTCEEEE
T ss_pred -C----CHHHHH---HHHHHhcCCCcEEEE
Confidence 1 111111 133456899998874
No 475
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=73.38 E-value=14 Score=34.22 Aligned_cols=34 Identities=24% Similarity=0.353 Sum_probs=27.6
Q ss_pred CCCCEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh
Q 014247 111 IEGKVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS 144 (428)
Q Consensus 111 ~~~~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s 144 (428)
....+||-||||. | ..+..|+++|..+++.+|.+
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4668999999994 4 36777888899999999965
No 476
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=73.36 E-value=14 Score=32.94 Aligned_cols=73 Identities=16% Similarity=0.175 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|++++.+ +.++.+.+.+...+ .++.++.+|+.+...
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999987764 4555666787 89999988 65555444444432 368889999876421
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
.+++|++|.+.
T Consensus 84 ~~g~id~lv~~A 95 (260)
T 2ae2_A 84 FHGKLNILVNNA 95 (260)
T ss_dssp TTTCCCEEEECC
T ss_pred cCCCCCEEEECC
Confidence 15789999864
No 477
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=73.36 E-value=14 Score=33.41 Aligned_cols=73 Identities=26% Similarity=0.369 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeC-------------h-HHHHHHHHHHHHCCCCCcEEEEEcccccc
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDA-------------S-DIAVQANEVVKANNLTDKVIVLHGRVEDV 173 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~-------------s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l 173 (428)
..++++|-.|++.|+ ++..+++.|+ +|+.+|. + +.++.+.+.+...+ .++.++.+|+.+.
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRDF 85 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCH
Confidence 568899999998874 5666777788 8999987 5 44444444444433 3589999998774
Q ss_pred cC-----------CCceeEEEEec
Q 014247 174 EI-----------DEEVDVIISEW 186 (428)
Q Consensus 174 ~~-----------~~~~DlVvs~~ 186 (428)
.. -++.|++|.+.
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnA 109 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANA 109 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 21 15789999864
No 478
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=73.35 E-value=14 Score=33.25 Aligned_cols=73 Identities=18% Similarity=0.209 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|++++.+ +.++.+.+.+...+ .++.++.+|+.+...
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999987764 4555666787 89999998 65555544444433 358889999876421
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
.+++|++|.+.
T Consensus 96 ~~g~id~lv~nA 107 (273)
T 1ae1_A 96 FDGKLNILVNNA 107 (273)
T ss_dssp TTSCCCEEEECC
T ss_pred cCCCCcEEEECC
Confidence 15789999864
No 479
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=73.27 E-value=22 Score=35.29 Aligned_cols=98 Identities=16% Similarity=0.196 Sum_probs=62.1
Q ss_pred CEEEEEcCCC--cHHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHH-------CCC-C--------CcEEEEEccccccc
Q 014247 114 KVVVDVGCGT--GILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKA-------NNL-T--------DKVIVLHGRVEDVE 174 (428)
Q Consensus 114 ~~VLDiGcGt--G~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~-------~~~-~--------~~v~~~~~d~~~l~ 174 (428)
++|--||+|. +.++..++++|. .|+..|.+ +.++.+++.+.. .+. . .++++. .|...+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~- 82 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGH-QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDIHAL- 82 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCGGGG-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCHHHh-
Confidence 4677889986 346677778887 79999999 887777654322 111 0 123432 333322
Q ss_pred CCCceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCe
Q 014247 175 IDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYAT 220 (428)
Q Consensus 175 ~~~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 220 (428)
...|+||... .........++.++...++|+.+++..+.+
T Consensus 83 --~~aDlVIeAV----pe~~~vk~~v~~~l~~~~~~~~IlasntSt 122 (483)
T 3mog_A 83 --AAADLVIEAA----SERLEVKKALFAQLAEVCPPQTLLTTNTSS 122 (483)
T ss_dssp --GGCSEEEECC----CCCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred --cCCCEEEEcC----CCcHHHHHHHHHHHHHhhccCcEEEecCCC
Confidence 5689999743 222233467888888899999888654443
No 480
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=73.15 E-value=5.3 Score=38.17 Aligned_cols=88 Identities=10% Similarity=0.100 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-CCceeEEEEecc
Q 014247 112 EGKVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI-DEEVDVIISEWM 187 (428)
Q Consensus 112 ~~~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~-~~~~DlVvs~~~ 187 (428)
...+|.=||+|. | .++..+++.|. +|+++|.+ +.++.+. ..+. .+ ..+..++.. ....|+|+...
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~----~~g~----~~-~~s~~e~~~~a~~~DvVi~~v- 89 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALE----REGI----AG-ARSIEEFCAKLVKPRVVWLMV- 89 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH----TTTC----BC-CSSHHHHHHHSCSSCEEEECS-
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHH----HCCC----EE-eCCHHHHHhcCCCCCEEEEeC-
Confidence 357899999985 2 35566677776 89999999 6554432 2222 11 123333211 13459999743
Q ss_pred hhhhcchhhHHHHHHHHhcccccCeEEE
Q 014247 188 GYMLLYESMLGSVITARDRWLKRGGLIL 215 (428)
Q Consensus 188 ~~~l~~~~~~~~~l~~~~~~LkpgG~lv 215 (428)
... ....++..+...|++|.+++
T Consensus 90 ----p~~-~v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 90 ----PAA-VVDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp ----CGG-GHHHHHHHHGGGCCTTCEEE
T ss_pred ----CHH-HHHHHHHHHHhhCCCCCEEE
Confidence 222 47778888888898887766
No 481
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=72.87 E-value=10 Score=34.89 Aligned_cols=85 Identities=16% Similarity=0.121 Sum_probs=52.7
Q ss_pred CEEEEEcCCCc--HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchhh
Q 014247 114 KVVVDVGCGTG--ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGYM 190 (428)
Q Consensus 114 ~~VLDiGcGtG--~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~~ 190 (428)
++|.-||||.= .++..+++.|. +|+++|.+ +.++.+.+ .+ +.+ ..+..+.. ...|+|+...
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~----~g----~~~-~~~~~~~~--~~aDvvi~~v---- 67 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVA----AG----ASA-ARSARDAV--QGADVVISML---- 67 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH----TT----CEE-CSSHHHHH--TTCSEEEECC----
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHH----CC----CeE-cCCHHHHH--hCCCeEEEEC----
Confidence 57888999962 35666777777 89999999 65544332 22 222 12333322 4579998733
Q ss_pred hcchhhHHHHHH---HHhcccccCeEEE
Q 014247 191 LLYESMLGSVIT---ARDRWLKRGGLIL 215 (428)
Q Consensus 191 l~~~~~~~~~l~---~~~~~LkpgG~lv 215 (428)
........++. .+...+++|..++
T Consensus 68 -p~~~~~~~v~~~~~~~~~~l~~~~~vi 94 (302)
T 2h78_A 68 -PASQHVEGLYLDDDGLLAHIAPGTLVL 94 (302)
T ss_dssp -SCHHHHHHHHHSSSCGGGSSCSSCEEE
T ss_pred -CCHHHHHHHHcCchhHHhcCCCCcEEE
Confidence 22334566666 6677788887665
No 482
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=72.56 E-value=8.8 Score=34.92 Aligned_cols=70 Identities=26% Similarity=0.303 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.+|.+ +.++.+.+.+ ..++.++.+|+.+...
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence 567899999988874 5666777788 89999998 6555444333 2358889999877421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 101 ~g~iD~lvnnA 111 (277)
T 3gvc_A 101 FGGVDKLVANA 111 (277)
T ss_dssp HSSCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999864
No 483
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=72.43 E-value=21 Score=37.57 Aligned_cols=100 Identities=18% Similarity=0.238 Sum_probs=68.9
Q ss_pred CEEEEEcCCCc--HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHC--------------CCCCcEEEEEcccccccCC
Q 014247 114 KVVVDVGCGTG--ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKAN--------------NLTDKVIVLHGRVEDVEID 176 (428)
Q Consensus 114 ~~VLDiGcGtG--~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~--------------~~~~~v~~~~~d~~~l~~~ 176 (428)
++|--||+|+- .++..+|.+|. .|+.+|.+ +.++.+++.+... ....++.+ ..|..++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l--- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESCGGGG---
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCcHHHH---
Confidence 58999999983 46677777888 89999999 8887776654321 11122222 2333333
Q ss_pred CceeEEEEecchhhhcchhhHHHHHHHHhcccccCeEEEccCCeee
Q 014247 177 EEVDVIISEWMGYMLLYESMLGSVITARDRWLKRGGLILPSYATLY 222 (428)
Q Consensus 177 ~~~DlVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 222 (428)
...|+|+=. +......-.++++++..+++|+.+|.-++.++.
T Consensus 392 ~~aDlVIEA----V~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~ 433 (742)
T 3zwc_A 392 STVDLVVEA----VFEDMNLKKKVFAELSALCKPGAFLCTNTSALN 433 (742)
T ss_dssp GSCSEEEEC----CCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSC
T ss_pred hhCCEEEEe----ccccHHHHHHHHHHHhhcCCCCceEEecCCcCC
Confidence 467998853 455666678899999999999998886665543
No 484
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=72.27 E-value=16 Score=32.68 Aligned_cols=88 Identities=13% Similarity=0.134 Sum_probs=53.6
Q ss_pred CCEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccCCCceeEEEEecchh
Q 014247 113 GKVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEIDEEVDVIISEWMGY 189 (428)
Q Consensus 113 ~~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~DlVvs~~~~~ 189 (428)
+.+|.-||||. | .++..+++.|...|+.+|.+ +.++.+.+. .+ +.+ ..+..+.. ...|+|+....
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~---~g----~~~-~~~~~~~~--~~~Dvvi~av~-- 77 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQK---VE----AEY-TTDLAEVN--PYAKLYIVSLK-- 77 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHH---TT----CEE-ESCGGGSC--SCCSEEEECCC--
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHH---cC----Cce-eCCHHHHh--cCCCEEEEecC--
Confidence 35789999985 2 34555566677448999998 655443332 22 232 23443332 46899997432
Q ss_pred hhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 190 MLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 190 ~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
......++..+...+++|..++-
T Consensus 78 ----~~~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 78 ----DSAFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp ----HHHHHHHHHHHHTTCCTTCEEEE
T ss_pred ----HHHHHHHHHHHHhhcCCCcEEEE
Confidence 12346677777778888876663
No 485
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=72.16 E-value=7.5 Score=35.33 Aligned_cols=73 Identities=19% Similarity=0.267 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC----------C
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------D 176 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------~ 176 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+...+ .++.++.+|+.+... .
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAI 107 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 567899999988764 5566677788 89999988 65555555555443 458999999877431 0
Q ss_pred CceeEEEEec
Q 014247 177 EEVDVIISEW 186 (428)
Q Consensus 177 ~~~DlVvs~~ 186 (428)
+++|++|.+.
T Consensus 108 g~iD~lvnnA 117 (275)
T 4imr_A 108 APVDILVINA 117 (275)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4789999864
No 486
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=72.08 E-value=2.2 Score=41.34 Aligned_cols=39 Identities=31% Similarity=0.376 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCC-cHHHHHHHH-cCCCeEEEEeCh-HHHHHH
Q 014247 111 IEGKVVVDVGCGT-GILSIFCAQ-AGAKRVYAVDAS-DIAVQA 150 (428)
Q Consensus 111 ~~~~~VLDiGcGt-G~ls~~la~-~g~~~V~giD~s-~~~~~a 150 (428)
.++++|+-+|+|. |..+..+++ .|+ +|+++|.+ .-.+.+
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQV 211 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 3688999999985 444444444 487 79999998 554444
No 487
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=72.07 E-value=8.1 Score=38.48 Aligned_cols=103 Identities=14% Similarity=0.069 Sum_probs=58.8
Q ss_pred CCCCEEEEEcCCC-c-HHHHHHHHcCCCeEEEEeCh-HHHHHHHHHHH---HCCC---------CCcEEEEEcccccccC
Q 014247 111 IEGKVVVDVGCGT-G-ILSIFCAQAGAKRVYAVDAS-DIAVQANEVVK---ANNL---------TDKVIVLHGRVEDVEI 175 (428)
Q Consensus 111 ~~~~~VLDiGcGt-G-~ls~~la~~g~~~V~giD~s-~~~~~a~~~~~---~~~~---------~~~v~~~~~d~~~l~~ 175 (428)
....+|.-||+|. | .++..+++.|. +|+++|.+ +.++..++... ..++ ..++.+. .|..+.-
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t-td~~~a~- 82 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS-TDIEAAV- 82 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-CCHHHHH-
T ss_pred CCCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE-CCHHHHh-
Confidence 4567999999995 3 35667778787 89999999 66655433100 0010 0123322 2322111
Q ss_pred CCceeEEEEecch----hhhcchhhHHHHHHHHhcccccCeEEEcc
Q 014247 176 DEEVDVIISEWMG----YMLLYESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 176 ~~~~DlVvs~~~~----~~l~~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
...|+|+..... ..-........+++.+...|++|.+++..
T Consensus 83 -~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 83 -AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp -HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred -hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 457988874311 00011145777888888889998877643
No 488
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=72.04 E-value=5.1 Score=37.62 Aligned_cols=89 Identities=21% Similarity=0.218 Sum_probs=48.3
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCC--CCCcEEEEEcc-
Q 014247 97 TETYRAAIMQNQSFIEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANN--LTDKVIVLHGR- 169 (428)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~--~~~~v~~~~~d- 169 (428)
...+.+.+.+......+++||-+|+| |. .+..+++.|+++|+.++.+ +..+.|++.+...+ ....+.++..+
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~ 216 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED 216 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch
Confidence 34556666654334678999999987 43 3455666788889988876 32333333322110 11123333211
Q ss_pred cccccC-CCceeEEEEec
Q 014247 170 VEDVEI-DEEVDVIISEW 186 (428)
Q Consensus 170 ~~~l~~-~~~~DlVvs~~ 186 (428)
..++.. ...+|+||...
T Consensus 217 ~~~l~~~l~~aDiIINaT 234 (315)
T 3tnl_A 217 HEQLRKEIAESVIFTNAT 234 (315)
T ss_dssp HHHHHHHHHTCSEEEECS
T ss_pred HHHHHhhhcCCCEEEECc
Confidence 111211 14689999854
No 489
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=72.02 E-value=8.6 Score=34.83 Aligned_cols=73 Identities=19% Similarity=0.209 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|++++.+ +-++...+.+...+. ++.++.+|+.+...
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGL--EGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 567899988987764 5566677788 89999998 666665555554432 47888889876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 103 ~g~iD~lvnnA 113 (270)
T 3ftp_A 103 FGALNVLVNNA 113 (270)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999864
No 490
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=71.99 E-value=14 Score=32.98 Aligned_cols=70 Identities=21% Similarity=0.293 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.+|.+ +-++.+.+.+ ..++.++.+|+.+...
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~ 79 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVEH 79 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 567899999988764 4566677788 89999998 5554443332 2358899999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+++|++|.+.
T Consensus 80 ~g~id~lv~~A 90 (259)
T 4e6p_A 80 AGGLDILVNNA 90 (259)
T ss_dssp SSSCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 14799999864
No 491
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=71.97 E-value=5.8 Score=36.55 Aligned_cols=74 Identities=22% Similarity=0.204 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +-++.+.+.+...+. .++.++.+|+.+...
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVVDA 116 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 567899999988764 5566677788 89999988 655555555444332 358999999887421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+++|++|.+.
T Consensus 117 ~g~iD~lvnnA 127 (293)
T 3rih_A 117 FGALDVVCANA 127 (293)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 15789999854
No 492
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=71.89 E-value=14 Score=33.02 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +.++.+.+.+...+ .++.++.+|+.+...
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999988764 4555666787 89999998 65555544444332 358889999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+.+|++|.+.
T Consensus 82 ~g~id~lv~nA 92 (262)
T 1zem_A 82 FGKIDFLFNNA 92 (262)
T ss_dssp HSCCCEEEECC
T ss_pred hCCCCEEEECC
Confidence 14789999864
No 493
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=71.89 E-value=11 Score=34.20 Aligned_cols=73 Identities=19% Similarity=0.249 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHH-HCCCCCcEEEEEcccccccC----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVK-ANNLTDKVIVLHGRVEDVEI---------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~-~~~~~~~v~~~~~d~~~l~~---------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +-...+.+.+. ..+ .++.++.+|+.+...
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATG--RRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 567899999988774 4556666788 89999998 55544443332 222 358999999876421
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 102 ~~g~id~lv~nA 113 (277)
T 4fc7_A 102 EFGRIDILINCA 113 (277)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 14789999864
No 494
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=71.86 E-value=9.6 Score=35.79 Aligned_cols=89 Identities=19% Similarity=0.191 Sum_probs=53.4
Q ss_pred CEEEEEcCCC--cHHHHHHHHcCCCeEEEEeChHHHHHHHHHHHHCCCCC---cEEEE-----EcccccccCCCceeEEE
Q 014247 114 KVVVDVGCGT--GILSIFCAQAGAKRVYAVDASDIAVQANEVVKANNLTD---KVIVL-----HGRVEDVEIDEEVDVII 183 (428)
Q Consensus 114 ~~VLDiGcGt--G~ls~~la~~g~~~V~giD~s~~~~~a~~~~~~~~~~~---~v~~~-----~~d~~~l~~~~~~DlVv 183 (428)
++|+-||+|. +.++..+++.|. .|+.++.++.++ .+.+.++.- ...+. ..|..++ ..+|+|+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~r~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~D~Vi 75 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGE-AINVLARGATLQ----ALQTAGLRLTEDGATHTLPVRATHDAAAL---GEQDVVI 75 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTC-CEEEECCHHHHH----HHHHTCEEEEETTEEEEECCEEESCHHHH---CCCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-EEEEEEChHHHH----HHHHCCCEEecCCCeEEEeeeEECCHHHc---CCCCEEE
Confidence 5789999986 245666777776 799999863222 233344310 00100 1122221 5689998
Q ss_pred EecchhhhcchhhHHHHHHHHhcccccCeEEEc
Q 014247 184 SEWMGYMLLYESMLGSVITARDRWLKRGGLILP 216 (428)
Q Consensus 184 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lv~ 216 (428)
... .......+++.+...|+|+..++.
T Consensus 76 lav------k~~~~~~~~~~l~~~l~~~~~iv~ 102 (335)
T 3ghy_A 76 VAV------KAPALESVAAGIAPLIGPGTCVVV 102 (335)
T ss_dssp ECC------CHHHHHHHHGGGSSSCCTTCEEEE
T ss_pred EeC------CchhHHHHHHHHHhhCCCCCEEEE
Confidence 743 223467888888888888887764
No 495
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=71.77 E-value=6.9 Score=35.50 Aligned_cols=73 Identities=16% Similarity=0.221 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +-++.+.+.+...+ .++.++.+|+.+...
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 568899999988764 5566677788 89999998 66666555555543 358899999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 101 ~g~iD~lv~nA 111 (271)
T 4ibo_A 101 GIDVDILVNNA 111 (271)
T ss_dssp TCCCCEEEECC
T ss_pred CCCCCEEEECC
Confidence 14789999864
No 496
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=71.77 E-value=12 Score=33.60 Aligned_cols=73 Identities=19% Similarity=0.239 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh--HHHHHHHHHHHHCCCCCcEEEEEcccccccC----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS--DIAVQANEVVKANNLTDKVIVLHGRVEDVEI---------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s--~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~---------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ ...+...+.+...+ .++.++.+|+.+...
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKG--YKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHH
Confidence 568899999988874 5566677788 89999884 55555555555543 358999999876421
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
.+++|++|.+.
T Consensus 104 ~~g~id~li~nA 115 (271)
T 4iin_A 104 SDGGLSYLVNNA 115 (271)
T ss_dssp HHSSCCEEEECC
T ss_pred hcCCCCEEEECC
Confidence 14789999864
No 497
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=71.74 E-value=2.5 Score=38.42 Aligned_cols=55 Identities=9% Similarity=0.009 Sum_probs=36.7
Q ss_pred EEEEEcccccc-c-C-CCceeEEEEecchhhh-c----------chhhHHHHHHHHhcccccCeEEEcc
Q 014247 163 VIVLHGRVEDV-E-I-DEEVDVIISEWMGYML-L----------YESMLGSVITARDRWLKRGGLILPS 217 (428)
Q Consensus 163 v~~~~~d~~~l-~-~-~~~~DlVvs~~~~~~l-~----------~~~~~~~~l~~~~~~LkpgG~lv~~ 217 (428)
..++++|..+. . + .++||+|++++.-... . +...+...+.++.++|+|||.+++.
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 45778887542 1 2 3789999998742211 0 0124567788889999999998864
No 498
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=71.54 E-value=11 Score=33.47 Aligned_cols=74 Identities=14% Similarity=0.157 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEccc--ccccC---------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRV--EDVEI--------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~--~~l~~--------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +-++.+.+.+...+- .++.++..|+ .+...
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHH
Confidence 568899999988764 4566677788 89999998 665555544443321 2478888888 43210
Q ss_pred --CCceeEEEEec
Q 014247 176 --DEEVDVIISEW 186 (428)
Q Consensus 176 --~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 88 ~~~g~id~lv~nA 100 (252)
T 3f1l_A 88 VNYPRLDGVLHNA 100 (252)
T ss_dssp HHCSCCSEEEECC
T ss_pred HhCCCCCEEEECC
Confidence 14789999864
No 499
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=71.51 E-value=9.2 Score=34.43 Aligned_cols=73 Identities=19% Similarity=0.223 Sum_probs=52.0
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHH-CCCCCcEEEEEcccccccC----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKA-NNLTDKVIVLHGRVEDVEI---------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~-~~~~~~v~~~~~d~~~l~~---------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|+.++.+ +-++.+.+.+.. .+ .++.++.+|+.+...
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFG--TDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 567899999988774 5666677788 79999998 666555554443 22 358999999887532
Q ss_pred -CCceeEEEEec
Q 014247 176 -DEEVDVIISEW 186 (428)
Q Consensus 176 -~~~~DlVvs~~ 186 (428)
-++.|++|.+.
T Consensus 95 ~~g~id~lv~nA 106 (266)
T 4egf_A 95 AFGGLDVLVNNA 106 (266)
T ss_dssp HHTSCSEEEEEC
T ss_pred HcCCCCEEEECC
Confidence 04789999864
No 500
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=71.48 E-value=14 Score=33.79 Aligned_cols=73 Identities=21% Similarity=0.258 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCCCcH---HHHHHHHcCCCeEEEEeCh-HHHHHHHHHHHHCCCCCcEEEEEcccccccC-----------
Q 014247 111 IEGKVVVDVGCGTGI---LSIFCAQAGAKRVYAVDAS-DIAVQANEVVKANNLTDKVIVLHGRVEDVEI----------- 175 (428)
Q Consensus 111 ~~~~~VLDiGcGtG~---ls~~la~~g~~~V~giD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~l~~----------- 175 (428)
..+++||-.|++.|+ ++..+++.|+ +|++++.+ +.++.+.+.+...+ .++.++.+|+.+...
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGA-TIVFNDINQELVDRGMAAYKAAG--INAHGYVCDVTDEDGIQAMVAQIESE 108 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999987764 4555666787 89999998 65555444444433 357888999876421
Q ss_pred CCceeEEEEec
Q 014247 176 DEEVDVIISEW 186 (428)
Q Consensus 176 ~~~~DlVvs~~ 186 (428)
-+.+|++|.+.
T Consensus 109 ~g~iD~lvnnA 119 (291)
T 3cxt_A 109 VGIIDILVNNA 119 (291)
T ss_dssp TCCCCEEEECC
T ss_pred cCCCcEEEECC
Confidence 14689999864
Done!