Your job contains 1 sequence.
>014250
MSLTRVKSPGWAAFDLKQRQKQGLAPETDKDSYPPISSTLTSLRNCENVSRNTDVLVKPF
SSVLRPSVEFPTLTEENECDYKGKHGHKAIEQHSRDLALKKLKALHSWADNSLIEDLMEA
VDNDIKRASNLLEGMVSSSGSAEENKETKIAESSSTIDESPCYRKGGEICFLEKALDLSN
LSTTTGDGVNDNFIESVDVRASSVINVSDKDDGMKSIMERLSSLPIEPEWEEDDVYLVHR
KDAMKMMRSASQHSKAANNAYLRGDHFSAQQHSLKARKEWLIAERLNSKAAKEILGIRNS
ENDMWKLDLHGLHAAEAVQALQERLQKIEMQRPMNCSVSPKKVKSKNGMVCTASLESFGC
MDMEVVDKQRSSLRQIQKSLQVITGIGNHSRGQAALPTAVKNFLSESGYRFDEARPGVIT
VRPKFRQR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014250
(428 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2171676 - symbol:AT5G23520 species:3702 "Arabi... 1000 7.9e-101 1
SGD|S000006120 - symbol:YPL199C "Putative protein of unkn... 134 2.0e-06 1
DICTYBASE|DDB_G0287897 - symbol:DDB_G0287897 "CCCH-type z... 113 2.4e-05 2
CGD|CAL0006270 - symbol:orf19.2246 species:5476 "Candida ... 125 2.8e-05 1
UNIPROTKB|Q59Z54 - symbol:CaO19.2246 "Putative uncharacte... 125 2.8e-05 1
DICTYBASE|DDB_G0288821 - symbol:DDB_G0288821 "K homology ... 127 2.8e-05 1
DICTYBASE|DDB_G0286103 - symbol:DDB_G0286103 "small MutS ... 79 8.7e-05 2
POMBASE|SPAC11H11.03c - symbol:SPAC11H11.03c "SMR and DUF... 102 0.00015 2
DICTYBASE|DDB_G0268232 - symbol:DDB_G0268232 "ubiquitin s... 104 0.00028 3
RGD|1565738 - symbol:N4bp2 "NEDD4 binding protein 2" spec... 113 0.00029 3
UNIPROTKB|Q86UW6 - symbol:N4BP2 "NEDD4-binding protein 2"... 126 0.00050 2
>TAIR|locus:2171676 [details] [associations]
symbol:AT5G23520 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] Pfam:PF01713
INTERPRO:IPR002625 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB025633 PROSITE:PS50828
InterPro:IPR013899 Pfam:PF08590 EMBL:AY136434 EMBL:BT000216
IPI:IPI00537434 RefSeq:NP_197743.1 UniGene:At.43963
ProteinModelPortal:Q9LT11 SMR:Q9LT11 STRING:Q9LT11 PRIDE:Q9LT11
EnsemblPlants:AT5G23520.1 GeneID:832417 KEGG:ath:AT5G23520
TAIR:At5g23520 eggNOG:NOG260225 HOGENOM:HOG000083818
InParanoid:Q9LT11 OMA:TRPGVIT PhylomeDB:Q9LT11
ProtClustDB:CLSN2686288 ArrayExpress:Q9LT11 Genevestigator:Q9LT11
Uniprot:Q9LT11
Length = 435
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 223/440 (50%), Positives = 296/440 (67%)
Query: 1 MSLTRVKSPGWAAFDLKQRQKQGLAPETDKDSYPPISSTLTSLRNCEN-VSRNTDVLVKP 59
MS + KS GW AFDLKQRQKQGL E + D +PP+S+++ + + RN + K
Sbjct: 1 MSWMKGKSSGWTAFDLKQRQKQGLESEVEGDPFPPVSTSVNASFGVRGRLRRNHEPSEKS 60
Query: 60 FSSVLRPSVEFPTLTEENECDYKGKHG---HK----AIEQHSRDLALKKLKALHSWADNS 112
FSSVL P FP LTE +C + + G K ++ +S DLA KLK ++SWAD++
Sbjct: 61 FSSVLLPPSRFPALTENKDCGNQERGGCCRRKPDTLSLPVNSHDLAFTKLKEMNSWADDN 120
Query: 113 LIEDLMEAVDNDIKRASNLLEGMVSSSGSAEENKETKIAESSSTIDESPCYRKGGEICFL 172
LI D++ + ++D + A L+GMVSS G +E +KI SS S YR + +
Sbjct: 121 LIRDVLLSTEDDFEMALAFLKGMVSS-GKEDEEPTSKIEGYSSDNRRSE-YRTFEKT--V 176
Query: 173 EKALDLSNLSTTTGDGVNDNFIESVDVRASSVINVSDK----DD--GMKSIMERLSSLPI 226
++ ++ ST G D +E+ D +S ++N SD DD + SI++RL S+PI
Sbjct: 177 TSSVKMAARSTFEDAGKYD--LENSD-GSSFLVNASDNEKFPDDISELDSIIQRLQSIPI 233
Query: 227 EPEWEEDDVYLVHRKDAMKMMRSASQHSKAANNAYLRGDHFSAQQHSLKARKEWLIAERL 286
EPEWEEDD+YL HRKDA+K+MRSAS HS+AA NA+ R DH SA+QHS KAR++WL AE+L
Sbjct: 234 EPEWEEDDLYLSHRKDALKVMRSASNHSRAAQNAFQRYDHASAKQHSDKAREDWLAAEKL 293
Query: 287 NSKAAKEILGIRNSENDMWKLDLHGLHAAEAVQALQERLQKIEMQRPMNCSVSPKKVKSK 346
N++AAK+I+GI N +ND+WKLDLHGLHA EAVQALQERLQ IE +N SVSP + +SK
Sbjct: 294 NAEAAKKIIGITNKDNDIWKLDLHGLHATEAVQALQERLQMIEGHFTVNRSVSPNRGRSK 353
Query: 347 NGMVCTASLESFGCMDMEVVDKQRSSLRQIQKSLQVITGIGNHSRGQAALPTAVKNFLSE 406
N + +AS E FG +D E + QR+S R+++ SLQVITGIG HSRGQA+LP AVK F +
Sbjct: 354 NAALRSASQEPFGRLDEEGMHCQRTSSRELRNSLQVITGIGKHSRGQASLPLAVKTFFED 413
Query: 407 SGYRFDEARPGVITVRPKFR 426
+ YRFDE RPGVITVRPKFR
Sbjct: 414 NRYRFDETRPGVITVRPKFR 433
>SGD|S000006120 [details] [associations]
symbol:YPL199C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0008150 "biological_process" evidence=ND]
SGD:S000006120 Pfam:PF01713 INTERPRO:IPR002625 GO:GO:0005737
EMBL:BK006949 SMART:SM00463 PROSITE:PS50828 InterPro:IPR013899
Pfam:PF08590 HOGENOM:HOG000205925 OrthoDB:EOG4N07QM EMBL:Z73555
PIR:S65218 RefSeq:NP_015125.1 ProteinModelPortal:Q08954 SMR:Q08954
IntAct:Q08954 MINT:MINT-2494044 STRING:Q08954 PaxDb:Q08954
PeptideAtlas:Q08954 PRIDE:Q08954 EnsemblFungi:YPL199C GeneID:855902
KEGG:sce:YPL199C CYGD:YPL199c eggNOG:NOG255699 OMA:RTEANEG
NextBio:980595 Genevestigator:Q08954 GermOnline:YPL199C
Uniprot:Q08954
Length = 240
Score = 134 (52.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/128 (29%), Positives = 67/128 (52%)
Query: 233 DDVYLVHRKDAMKMMRSASQHSKAANNAYLRGDHFSAQQHSLKARKEWLIAERLNSKAAK 292
D+ Y R+ A + + Q S + AY +GD A + S K++ + AE N +AA+
Sbjct: 23 DEEYQRLRRLADEAYKKRDQLSHESQTAYQQGDKKLAHELSEKSKAQLKTAEDFNMQAAE 82
Query: 293 EILGIRNSENDMWKLDLHGLHAAEAVQALQERLQ-KIEMQRPMNCSVSPKKVKSKNGMV- 350
+ N+++ ++DLHGL+ EA+ LQ+R++ I+ P + K + S+NG+
Sbjct: 83 YVFVENNADSSSNEIDLHGLYVKEALFILQKRIKFAIDHNEPQLNVIVGKGLHSQNGIAK 142
Query: 351 CTASLESF 358
S+E F
Sbjct: 143 LKPSIEEF 150
>DICTYBASE|DDB_G0287897 [details] [associations]
symbol:DDB_G0287897 "CCCH-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000571
PROSITE:PS50103 dictyBase:DDB_G0287897 Pfam:PF01713
INTERPRO:IPR002625 GO:GO:0008270 GO:GO:0003676 EMBL:AAFI02000104
PROSITE:PS50828 InterPro:IPR013899 Pfam:PF08590 eggNOG:NOG286210
RefSeq:XP_637093.1 ProteinModelPortal:Q54JQ9
EnsemblProtists:DDB0232926 GeneID:8626348 KEGG:ddi:DDB_G0287897
InParanoid:Q54JQ9 OMA:TIICKHW Uniprot:Q54JQ9
Length = 606
Score = 113 (44.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 31/110 (28%), Positives = 56/110 (50%)
Query: 229 EWEEDDV-----YLVHRKDAMKMMRSASQHSKAANNAYLRGDHFSAQQHSLKARKEWLIA 283
EW E V Y HR+ A+ R ++ A A+ G ++++++L+A++ +
Sbjct: 451 EWVETGVEVSLLYKQHRESAILHARERNRLFNQAARAF--GSAVTSREYALEAQQHDALM 508
Query: 284 ERLNSKAAKEILGIRNSENDMWK---LDLHGLHAAEAVQALQERLQKIEM 330
+ N KA I RN + D LD HGLH +EA++ L++ L ++ +
Sbjct: 509 KEYNRKARDIIFNTRNKDYDPVNNNVLDFHGLHVSEALEILEDHLDRLPL 558
Score = 64 (27.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 380 LQVITGIGNHSRGQAA-LPTAVKNFLSESGYRFDE 413
L VI G G+HS +A LP +K++LS + + F +
Sbjct: 558 LTVIVGTGHHSLTPSARLPNKIKDYLSGNSFSFKD 592
>CGD|CAL0006270 [details] [associations]
symbol:orf19.2246 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] CGD:CAL0006270 Pfam:PF01713
INTERPRO:IPR002625 EMBL:AACQ01000095 EMBL:AACQ01000096
SMART:SM00463 PROSITE:PS50828 InterPro:IPR013899 Pfam:PF08590
eggNOG:NOG255699 RefSeq:XP_714774.1 RefSeq:XP_714836.1
ProteinModelPortal:Q59Z54 STRING:Q59Z54 GeneID:3643524
GeneID:3643573 KEGG:cal:CaO19.2246 KEGG:cal:CaO19.9786
Uniprot:Q59Z54
Length = 256
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 233 DDVYLVHRKDAMKMMRSASQHSKAANNAYLRGDHFSAQQHSLKARKEWLIAERLNSKAAK 292
D Y R +A ++ + Q S+ + NAY +GD A + S ++++ AE N KAA+
Sbjct: 25 DSEYKRLRSEADRLFQKRQQLSQQSQNAYKQGDGQKAHELSEESKRVLAQAEECNRKAAE 84
Query: 293 EILGIRNSENDMWKLDLHGLHAAEAVQALQERLQKIEMQRPMNCSVSPKK-VKSKNGM 349
+ N ++ ++DLHGL+ EA L+ R+ ++ +V K + S NG+
Sbjct: 85 YVFRENNEDSGPDEIDLHGLYVKEAEWILERRIYYAVKTNQLHLNVIVGKGLHSANGV 142
>UNIPROTKB|Q59Z54 [details] [associations]
symbol:CaO19.2246 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] CGD:CAL0006270 Pfam:PF01713 INTERPRO:IPR002625
EMBL:AACQ01000095 EMBL:AACQ01000096 SMART:SM00463 PROSITE:PS50828
InterPro:IPR013899 Pfam:PF08590 eggNOG:NOG255699 RefSeq:XP_714774.1
RefSeq:XP_714836.1 ProteinModelPortal:Q59Z54 STRING:Q59Z54
GeneID:3643524 GeneID:3643573 KEGG:cal:CaO19.2246
KEGG:cal:CaO19.9786 Uniprot:Q59Z54
Length = 256
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 233 DDVYLVHRKDAMKMMRSASQHSKAANNAYLRGDHFSAQQHSLKARKEWLIAERLNSKAAK 292
D Y R +A ++ + Q S+ + NAY +GD A + S ++++ AE N KAA+
Sbjct: 25 DSEYKRLRSEADRLFQKRQQLSQQSQNAYKQGDGQKAHELSEESKRVLAQAEECNRKAAE 84
Query: 293 EILGIRNSENDMWKLDLHGLHAAEAVQALQERLQKIEMQRPMNCSVSPKK-VKSKNGM 349
+ N ++ ++DLHGL+ EA L+ R+ ++ +V K + S NG+
Sbjct: 85 YVFRENNEDSGPDEIDLHGLYVKEAEWILERRIYYAVKTNQLHLNVIVGKGLHSANGV 142
>DICTYBASE|DDB_G0288821 [details] [associations]
symbol:DDB_G0288821 "K homology (KH), type 1 domain
containing-protein" species:44689 "Dictyostelium discoideum"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 dictyBase:DDB_G0288821 Pfam:PF01713
INTERPRO:IPR002625 GO:GO:0003723 EMBL:AAFI02000125 PROSITE:PS50828
InterPro:IPR013899 Pfam:PF08590 eggNOG:NOG266962 RefSeq:XP_636542.1
ProteinModelPortal:Q54ID5 PRIDE:Q54ID5 EnsemblProtists:DDB0232945
GeneID:8626827 KEGG:ddi:DDB_G0288821 InParanoid:Q54ID5 OMA:YFDMHGL
ProtClustDB:CLSZ2728827 Uniprot:Q54ID5
Length = 316
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 42/157 (26%), Positives = 77/157 (49%)
Query: 180 NLSTTTGDGVNDNFIESVDVRASSVINVSDKDDGMKSIMERL-SSLPIEPEWEEDDVYLV 238
N T T G +D+ + RA +IN + +S ++ S + + E E +
Sbjct: 116 NGETITVRGSSDSDCQ----RAIDMINKIKGEHKTQSQKDKEHSDMKDDHEKEHQRTEEL 171
Query: 239 HRKDAMKMMRSASQHS---KAANNAYLRGDHFSAQQHSLKARKEWLIAERLNSKAAKEIL 295
++K K+ R A + K A+ A+ GD Q +A+ + E+ + +A+K +
Sbjct: 172 YKKGQEKVDRIAKERDDLHKQADKAFESGDKSLGHQLREQAKAKTQELEKASKEASKSVF 231
Query: 296 GIRNSENDMWKLDLHGLHAAEAVQALQERLQKIEMQR 332
+N++ND + +DLHGLHA +A++ L E L I+ +
Sbjct: 232 IAKNAKNDKFTVDLHGLHANDAIELLVEHLDGIKSNK 268
>DICTYBASE|DDB_G0286103 [details] [associations]
symbol:DDB_G0286103 "small MutS related (smr) family
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0286103 Pfam:PF01713 INTERPRO:IPR002625
EMBL:AAFI02000085 SMART:SM00463 PROSITE:PS50828 RefSeq:XP_637898.1
ProteinModelPortal:Q54MD6 EnsemblProtists:DDB0220504 GeneID:8625408
KEGG:ddi:DDB_G0286103 eggNOG:euNOG30121 InParanoid:Q54MD6
OMA:ENSKGGA Uniprot:Q54MD6
Length = 159
Score = 79 (32.9 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 363 MEVVDKQRSSLRQIQKS-LQVITGIGNHSRGQAALPTAVKNFLSESGYRFDEARPG 417
+E+ ++ +++ K L VITG G+HS G+A + V +FL E+ F+E G
Sbjct: 89 LELKNRINQLIKEKYKGKLLVITGRGSHSVGEAKIKPRVNSFLKENSLLFEENSKG 144
Score = 76 (31.8 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 14/64 (21%), Positives = 34/64 (53%)
Query: 265 DHFSAQQHSLKARKEWLIAERLNSKAAKEILGIRNSENDMWKLDLHGLHAAEAVQALQER 324
+ + + + LK K++ + + +I + N + D + +DLHGL++ A+ L+ R
Sbjct: 35 EKLNKEVNQLKKEKKYQLIKPTVDDFNSQIFQLSNKDRDKYTIDLHGLYSDHAILELKNR 94
Query: 325 LQKI 328
+ ++
Sbjct: 95 INQL 98
>POMBASE|SPAC11H11.03c [details] [associations]
symbol:SPAC11H11.03c "SMR and DUF1771 domain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004519
"endonuclease activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA
repair" evidence=ISM] [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity" evidence=ISS]
PomBase:SPAC11H11.03c Pfam:PF01713 INTERPRO:IPR002625 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0006281 GO:GO:0004519
GO:GO:0046404 SMART:SM00463 PROSITE:PS50828 InterPro:IPR013899
Pfam:PF08590 PIR:T37552 RefSeq:NP_594721.1
EnsemblFungi:SPAC11H11.03c.1 GeneID:2541436 KEGG:spo:SPAC11H11.03c
eggNOG:NOG266962 HOGENOM:HOG000205925 OMA:ARILENT OrthoDB:EOG4N07QM
NextBio:20802538 Uniprot:Q9UTP4
Length = 206
Score = 102 (41.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 257 ANNAYLRGDHFSAQQHSLKARKEWLIAERL---NSKAAKEILGIRNSENDMWKLDLHGLH 313
A +AY G+ A+ H L + L ER+ N +AA I +NS+ + ++DLHGL+
Sbjct: 25 AQHAYSAGN--KAKAHELSQEGK-LCGERMENYNRQAASAIYLYKNSQCNPDEIDLHGLY 81
Query: 314 AAEAVQALQERLQ 326
EAVQA+Q+R++
Sbjct: 82 IDEAVQAVQQRIE 94
Score = 52 (23.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 365 VVDKQRSSLRQIQKSLQVITGIGNHSRGQAA-LPTAVKNFLSESGYRFD-EARPGVITV 421
V + + +R+ L +I G GNHS L A+ L + +++ E G I V
Sbjct: 89 VQQRIENCIRRGDNHLHIIVGRGNHSANHVEKLRPAIVRMLEQQSIKYNSEVNEGRIYV 147
>DICTYBASE|DDB_G0268232 [details] [associations]
symbol:DDB_G0268232 "ubiquitin system component Cue
domain containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003892 PROSITE:PS51140
dictyBase:DDB_G0268232 Pfam:PF01713 INTERPRO:IPR002625
EMBL:AAFI02000003 PROSITE:PS50828 InterPro:IPR013899 Pfam:PF08590
eggNOG:NOG286210 RefSeq:XP_647661.1 ProteinModelPortal:Q55F72
EnsemblProtists:DDB0232946 GeneID:8616478 KEGG:ddi:DDB_G0268232
InParanoid:Q55F72 Uniprot:Q55F72
Length = 1025
Score = 104 (41.7 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 236 YLVHRKDAMKMMRSASQHSKAANNAYLRGDHFSAQQHSLKARKEWLIAERLNSKAAKEIL 295
Y HR +A + ++ + K+A AY++ A+ S + ++ +A+ N A+ +I
Sbjct: 875 YTDHRMEAERYIKMRNACFKSAAEAYMKNKPADARSLSEQGKRYDELAKEANLCASNQIF 934
Query: 296 GIRNSE-NDMWKLDLHGLHAAEAVQALQERL 325
NS D ++DLHGLH EA+ +Q+ L
Sbjct: 935 MECNSRIGDTLRIDLHGLHVNEALDMVQQAL 965
Score = 69 (29.3 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 378 KSLQVITGIGNHSRGQAA-LPTAVKNFLSESGYRFDEARPGVITVR 422
K + ITG GNHS+G A + A+ +FL E ++ + + G+I V+
Sbjct: 979 KYINFITGQGNHSQGGIARIKPALLSFLKECNIKYSD-KGGMIEVQ 1023
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 29 DKDSYPPISSTLTSLRNCENVSRNTDVLVKP 59
D D+ +++T T+ N ++N + KP
Sbjct: 561 DNDNDSKVTTTTTTTTTSTNTNKNNNESQKP 591
>RGD|1565738 [details] [associations]
symbol:N4bp2 "NEDD4 binding protein 2" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity"
evidence=IEA;ISO] Pfam:PF01713 RGD:1565738 INTERPRO:IPR002625
GO:GO:0005524 GO:GO:0004519 GO:GO:0046404 SMART:SM00463
PROSITE:PS50828 GeneTree:ENSGT00510000047015 OrthoDB:EOG46WZ7M
InterPro:IPR013899 Pfam:PF08590 IPI:IPI00364487
ProteinModelPortal:D3ZLS6 Ensembl:ENSRNOT00000031792
UCSC:RGD:1565738 Uniprot:D3ZLS6
Length = 1677
Score = 113 (44.8 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 312 LHAAEAVQALQERLQKIEMQRPMNCSVSPKKVKSKNGMVCTASLESFGCMDMEVVDKQRS 371
LH + +A L +E+ +N S+ P+ V +G+ ++E + + ++ +
Sbjct: 1568 LHEQKMREA--NHLAAVEIFEKVNASLLPQNVLDLHGLHVDEAIEHLTAVLQQKTEEFKQ 1625
Query: 372 SLRQIQKSLQVITGIGNHSRGQAA-LPTAVKNFLSESGYRFDEARPGVITVRPK 424
S + L VITG GNHS+G A + AV +L+ +RF E +PG + V K
Sbjct: 1626 SGGK--PYLSVITGRGNHSQGGVARIKPAVIKYLTSHSFRFSEIKPGCLKVMLK 1677
Score = 56 (24.8 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 29/122 (23%), Positives = 53/122 (43%)
Query: 114 IEDLMEAVDNDIKRASNLLEGMVSSSGSAEENKETKIAESSSTIDESPCYRKGGEICFLE 173
++DL E + DI A++LL + ETK+ E + ++ Y + ++
Sbjct: 1019 LKDLYERCNKDIIWATSLLL-----------DSETKLCEDAEVVNPPESYSES-QVGPFS 1066
Query: 174 KALDLSNLSTTTG--DGVND---NFIESVDVRASSVINVSDKDDGMKSIMERLSSL-PIE 227
LDL + + G +G N F + +R +S + D + G S E + ++ P
Sbjct: 1067 MGLDLKEIISHRGTSEGSNSCVSEFSPGIGIRNTSAQSDGDPEKG-NSEQEGIRAINPEN 1125
Query: 228 PE 229
PE
Sbjct: 1126 PE 1127
Score = 51 (23.0 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 37 SSTLTSLRNCENVSRNTDVLVKPFSSVL--RPSVEFPTLTEENEC 79
SS +TSL + +N N+++ VK +++L P L E C
Sbjct: 105 SSGMTSLPSVQNTGSNSEI-VKSSAALLGSNPLTSHSVLNEPESC 148
>UNIPROTKB|Q86UW6 [details] [associations]
symbol:N4BP2 "NEDD4-binding protein 2" species:9606 "Homo
sapiens" [GO:0005829 "cytosol" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004519 "endonuclease activity"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0046404
"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity"
evidence=IDA] InterPro:IPR003892 InterPro:IPR009060 PROSITE:PS51140
Pfam:PF01713 INTERPRO:IPR002625 GO:GO:0005524 GO:GO:0005737
PDB:3BHB PDBsum:3BHB GO:GO:0004519 SUPFAM:SSF46934 GO:GO:0046404
PROSITE:PS50828 eggNOG:NOG80242 EMBL:AY267013 EMBL:BC126466
EMBL:AK001542 EMBL:AB037834 IPI:IPI00328825 IPI:IPI00409742
RefSeq:NP_060647.2 UniGene:Hs.391463 PDB:2D9I PDB:2VKC PDB:3FAU
PDBsum:2D9I PDBsum:2VKC PDBsum:3FAU ProteinModelPortal:Q86UW6
SMR:Q86UW6 IntAct:Q86UW6 STRING:Q86UW6 PhosphoSite:Q86UW6
DMDM:145559498 PaxDb:Q86UW6 PRIDE:Q86UW6 Ensembl:ENST00000261435
GeneID:55728 KEGG:hsa:55728 UCSC:uc003guy.4 UCSC:uc010ifr.3
CTD:55728 GeneCards:GC04P040058 H-InvDB:HIX0004169 HGNC:HGNC:29851
HPA:HPA036770 neXtProt:NX_Q86UW6 PharmGKB:PA162396580
HOGENOM:HOG000113717 HOVERGEN:HBG101251 InParanoid:Q86UW6 KO:K15720
OMA:FEKDCAT OrthoDB:EOG46WZ7M PhylomeDB:Q86UW6
EvolutionaryTrace:Q86UW6 GenomeRNAi:55728 NextBio:60645
ArrayExpress:Q86UW6 Bgee:Q86UW6 CleanEx:HS_N4BP2
Genevestigator:Q86UW6 GermOnline:ENSG00000078177 InterPro:IPR013899
Pfam:PF08590 Uniprot:Q86UW6
Length = 1770
Score = 126 (49.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 39/117 (33%), Positives = 59/117 (50%)
Query: 312 LHAAEAVQALQERLQKIEMQRPMNCSVSPKKVKSKNGMVCTASLESFGCMDMEVVDKQRS 371
LH + +A L IE+ +N S+ P+ V +G+ +LE M V++K+
Sbjct: 1661 LHEQKMKEA--NHLAAIEIFEKVNASLLPQNVLDLHGLHVDEALEHL----MRVLEKKTE 1714
Query: 372 SLRQI--QKSLQVITGIGNHSRGQAAL--PTAVKNFLSESGYRFDEARPGVITVRPK 424
+Q + L VITG GNHS+G A P +K +S S +RF E +PG + V K
Sbjct: 1715 EFKQNGGKPYLSVITGRGNHSQGGVARIKPAVIKYLISHS-FRFSEIKPGCLKVMLK 1770
Score = 48 (22.0 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 123 NDIKRASNLLEGMVSSSGSAEENKETKIAESSSTIDESPCYRKGGEI 169
N ++ +N E +VSS S EE T + + +D+ + EI
Sbjct: 11 NPFRKTANPKEVVVSSVASREEPTTTLPSMGETKVDQEELFTSISEI 57
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.127 0.358 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 428 428 0.00085 118 3 11 23 0.45 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 614 (65 KB)
Total size of DFA: 262 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.93u 0.14s 45.07t Elapsed: 00:00:02
Total cpu time: 44.93u 0.14s 45.07t Elapsed: 00:00:02
Start: Fri May 10 10:00:02 2013 End: Fri May 10 10:00:04 2013